Bioconductor Affymetrix Probe Listing

Probe log2FC AveExpr t P.Value adj.P.Val B Symbol Description Chromosome Chromosome Location GenBank Gene Cytoband UniGene PubMed Gene Ontology Pathway
209005_at 0.982 7.759 10.038 4.174e-08 0.001 7.804 FBXL5 F-box and leucine-rich repeat protein 5 4 -15215251 AF157323 4p15.32 Hs.643433 13

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

protein ubiquitination

modification-dependent protein catabolic process

 
228044_at 0.956 5.006 10.029 4.224e-08 0.001 7.796 SERP2 stress-associated endoplasmic reticulum protein family member 2 13 43845977 AI420319 13q14.11 Hs.377972 4

endoplasmic reticulum

protein transport

membrane

integral to membrane

intracellular protein transmembrane transport

 
209075_s_at -1.031 11.329 -9.922 4.874e-08 0.001 7.693 ISCU iron-sulfur cluster scaffold homolog (E. coli) 12 107480423 AY009128 12q24.1 Hs.615131 14

iron ion binding

nucleus

cytoplasm

mitochondrion

cytosol

nitrogen fixation

iron-sulfur cluster assembly

protein complex scaffold

metal ion binding

iron-sulfur cluster binding

 
242414_at 1.305 5.714 9.460 9.153e-08 0.001 7.232 QPRT quinolinate phosphoribosyltransferase 16 29597941 AW960707 16p11.2 Hs.513484 8

nicotinate-nucleotide diphosphorylase (carboxylating) activity

nicotinate-nucleotide diphosphorylase (carboxylating) activity

cellular_component

cytosol

metabolic process

NAD biosynthetic process

transferase activity, transferring glycosyl groups

pyridine nucleotide biosynthetic process

quinolinate catabolic process

protein homodimerization activity

protein oligomerization

Nicotinate and nicotinamide metabolism

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Metabolic pathways

224323_s_at 1.032 5.975 9.237 1.251e-07 0.001 6.999 MRO maestro 18 -46575487, -46575487 AB042647 18q21 Hs.30495 6

binding

nucleus

nucleolus

 
225817_at 0.912 4.119 8.153 6.183e-07 0.004 5.769 CGNL1 cingulin-like 1 15 55455996 AB051536 15q21.3 Hs.148989 6

motor activity

tight junction

myosin complex

cell junction

 
204044_at 1.358 5.567 8.109 6.616e-07 0.004 5.715 QPRT quinolinate phosphoribosyltransferase 16 29597941 NM_014298 16p11.2 Hs.513484 8

nicotinate-nucleotide diphosphorylase (carboxylating) activity

nicotinate-nucleotide diphosphorylase (carboxylating) activity

cellular_component

cytosol

metabolic process

NAD biosynthetic process

transferase activity, transferring glycosyl groups

pyridine nucleotide biosynthetic process

quinolinate catabolic process

protein homodimerization activity

protein oligomerization

Nicotinate and nicotinamide metabolism

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Metabolic pathways

217963_s_at 1.534 8.334 8.072 6.998e-07 0.004 5.671 NGFRAP1 nerve growth factor receptor (TNFRSF16) associated protein 1 X 102517923, 102518764 NM_014380 Xq22.2 Hs.448588 Hs.719133 17

protein binding

nucleus

cytoplasm

apoptosis

multicellular organismal development

metal ion binding

Neurotrophin signaling pathway

224324_at 0.907 5.004 8.045 7.297e-07 0.004 5.638 MRO maestro 18 -46575487, -46575487 AB042647 18q21 Hs.30495 6

binding

nucleus

nucleolus

 
1557260_a_at 1.608 2.670 7.978 8.097e-07 0.004 5.555 ZNF382 zinc finger protein 382 19 41788060 BM973530 19q13.12 Hs.631591 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
201462_at 1.101 4.520 7.537 1.631e-06 0.006 4.992 SCRN1 secernin 1 7 -29926244, -29926244, -29926244 NM_014766 7p14.3-p14.1 Hs.520740 11

molecular_function

nucleus

cytoplasm

exocytosis

nuclear membrane

 
227558_at 1.060 6.002 7.503 1.723e-06 0.006 4.947 CBX4 chromobox homolog 4 (Pc class homolog, Drosophila) 17 -75421549 AI570531 17q25.3 Hs.714363 25

chromatin

chromatin binding

transcription corepressor activity

nucleus

chromatin assembly or disassembly

anti-apoptosis

negative regulation of transcription

chromatin modification

enzyme binding

modification-dependent protein catabolic process

 
222431_at 1.036 6.362 7.458 1.854e-06 0.006 4.888 SPIN1 spindlin 1 9 90193116 AL136719 9q22.1-q22.3 Hs.146804 16

nucleus

spindle

cell cycle

multicellular organismal development

gamete generation

 
210091_s_at -0.896 7.854 -7.432 1.937e-06 0.006 4.852 DTNA dystrobrevin, alpha 18 30327251, 30327251, 30327251, 30427279, 30544193, 30589937, 30589937, 30652299, 30652299 U46745 18q12 Hs.643454 38

calcium ion binding

protein binding

cytoplasm

striated muscle contraction

signal transduction

neuromuscular synaptic transmission

zinc ion binding

cell junction

synapse

 
239035_at 0.625 6.290 7.417 1.983e-06 0.006 4.833 MTHFR 5,10-methylenetetrahydrofolate reductase (NADPH) 1 -11768373 AL138431 1p36.3 Hs.214142 1776

methylenetetrahydrofolate reductase (NADPH) activity

methylenetetrahydrofolate reductase (NADPH) activity

protein binding

cytosol

cellular amino acid metabolic process

methionine metabolic process

blood circulation

oxidoreductase activity

oxidation reduction

One carbon pool by folate

Methane metabolism

Metabolic pathways

219765_at 2.048 4.909 7.391 2.068e-06 0.006 4.799 ZNF329 zinc finger protein 329 19 -63329506 NM_024620 19q13.43 Hs.458377 2

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
204270_at 0.638 6.165 7.319 2.327e-06 0.007 4.702 SKI v-ski sarcoma viral oncogene homolog (avian) 1 2149993 AI568728 1q22-q24 Hs.663133 54

nucleotide binding

protein binding

nucleus

nucleoplasm

cell differentiation

BMP signaling pathway

 
1555310_a_at 0.775 5.885 7.094 3.380e-06 0.009 4.394 PAK6 p21 protein (Cdc42/Rac)-activated kinase 6 15 38296920, 38319326 BC035596 15q14 Hs.513645 13

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

transferase activity

ErbB signaling pathway

Axon guidance

Focal adhesion

T cell receptor signaling pathway

Regulation of actin cytoskeleton

Renal cell carcinoma

1558486_at 1.031 5.671 6.849 5.123e-06 0.012 4.049 ZNF493 zinc finger protein 493 19 21371760, 21371760 BC022394 19p12 Hs.656558 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
204309_at 0.666 4.458 6.748 6.084e-06 0.013 3.905 CYP11A1 cytochrome P450, family 11, subfamily A, polypeptide 1 15 -72417155, -72417155 NM_000781 15q23-q24 Hs.303980 88

monooxygenase activity

mitochondrion

lipid metabolic process

C21-steroid hormone biosynthetic process

cholesterol metabolic process

cholesterol metabolic process

cholesterol monooxygenase (side-chain-cleaving) activity

cholesterol monooxygenase (side-chain-cleaving) activity

electron carrier activity

membrane

heme binding

mitochondrial membrane

vitamin D metabolic process

metal ion binding

oxidation reduction

C21-Steroid hormone metabolism

Metabolic pathways

239763_at 0.536 5.742 6.589 8.020e-06 0.015 3.672 PRDM11 PR domain containing 11 11 45072139 AA157112 11p11 Hs.178715 3    
230919_at 1.033 3.345 6.585 8.068e-06 0.015 3.667 ZNF233 zinc finger protein 233 19 49455915 AW006620 19q13.31 Hs.466891 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
236328_at 0.690 4.744 6.565 8.368e-06 0.015 3.637 ZNF285A zinc finger protein 285A 19 -49581647 AW513227   Hs.709428 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
223016_x_at -0.979 7.617 -6.533 8.837e-06 0.016 3.590 ZRANB2 zinc finger, RAN-binding domain containing 2 1 -71301561 AF065392 1p31 Hs.194718 18

transcription factor activity

RNA binding

protein binding

intracellular

nucleus

mRNA processing

zinc ion binding

RNA splicing

metal ion binding

 
205311_at 1.014 4.213 6.518 9.076e-06 0.016 3.568 DDC dopa decarboxylase (aromatic L-amino acid decarboxylase) 7 -50493627, -50493627 NM_000790 7p12.2 Hs.359698 48

aromatic-L-amino-acid decarboxylase activity

protein binding

cellular amino acid and derivative metabolic process

response to toxin

lyase activity

carboxylic acid metabolic process

pyridoxal phosphate binding

catecholamine biosynthetic process

Histidine metabolism

Tyrosine metabolism

Phenylalanine metabolism

Tryptophan metabolism

Isoquinoline alkaloid biosynthesis

Betalain biosynthesis

Biosynthesis of alkaloids derived from shikimate pathway

Metabolic pathways

209004_s_at 0.712 10.040 6.356 1.209e-05 0.020 3.325 FBXL5 F-box and leucine-rich repeat protein 5 4 -15215251 AF142481 4p15.32 Hs.643433 13

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

protein ubiquitination

modification-dependent protein catabolic process

 
201860_s_at 0.829 5.248 6.314 1.302e-05 0.021 3.261 PLAT plasminogen activator, tissue 8 -42151392 NM_000930 8p12 Hs.491582 209

serine-type endopeptidase activity

extracellular region

extracellular region

extracellular space

protein modification process

proteolysis

blood coagulation

peptidase activity

Complement and coagulation cascades

212168_at -0.696 5.686 -6.243 1.476e-05 0.023 3.154 RBM12 RNA binding motif protein 12 20 -33700292 AL514547 20q11.21 Hs.246413 13

nucleotide binding

RNA binding

protein binding

nucleus

 
207757_at 0.783 4.480 6.059 2.060e-05 0.030 2.868 ZFP2 zinc finger protein 2 homolog (mouse) 5 178255521 NM_030613 5q35.3 Hs.654533 1

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
219073_s_at 1.405 4.964 6.049 2.096e-05 0.030 2.854 OSBPL10 oxysterol binding protein-like 10 3 -31677320 NM_017784 3p22.3 Hs.150122 7

lipid transport

steroid metabolic process

 
238049_at 0.711 3.958 5.985 2.358e-05 0.033 2.752 GRAMD3 GRAM domain containing 3 5 125723686, 125786767, 125828685 AW971198 5q23.2 Hs.363558 6    
240744_at 0.888 5.173 5.967 2.433e-05 0.033 2.725 CPA5 carboxypeptidase A5 7 129771865, 129771865 AW184014 7q32 Hs.567642 9

metallocarboxypeptidase activity

extracellular region

proteolysis

peptidase activity

metallopeptidase activity

zinc ion binding

metal ion binding

 
219109_at 1.008 6.414 5.938 2.570e-05 0.033 2.678 SPAG16 sperm associated antigen 16 2 213857360, 213857360 NM_024532 2q34 Hs.602792 Hs.715620 6

cytoplasm

cilium

flagellum

cell projection organization

 
223192_at 0.551 8.030 5.883 2.841e-05 0.035 2.591 SLC25A28 solute carrier family 25, member 28 10 -101360264 AF267854 10q23-q24 Hs.403790 6

binding

iron ion binding

mitochondrion

mitochondrial inner membrane

ion transport

iron ion transport

membrane

integral to membrane

 
229160_at -1.273 7.231 -5.810 3.253e-05 0.037 2.474 MUM1L1 melanoma associated antigen (mutated) 1-like 1 X 105307974 AI967987 Xq22.3 Hs.592221 5    
227379_at 0.791 5.055 5.772 3.487e-05 0.037 2.414 MBOAT1 membrane bound O-acyltransferase domain containing 1 6 -20208913 AI734993 6p22.3 Hs.377830 7

acyltransferase activity

phospholipid biosynthetic process

membrane

integral to membrane

transferase activity

 
205591_at -0.782 6.013 -5.757 3.587e-05 0.037 2.389 OLFM1 olfactomedin 1 9 137106909, 137106923 NM_006334 9q34.3 Hs.522484 9

protein binding

endoplasmic reticulum

endoplasmic reticulum lumen

multicellular organismal development

nervous system development

membrane

 
226548_at 0.639 7.623 5.744 3.675e-05 0.037 2.368 SBK1 SH3-binding domain kinase 1 16 28211340 AI935915 16p11.2 Hs.97837 3

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

transferase activity

 
201904_s_at 1.178 6.793 5.718 3.852e-05 0.037 2.327 CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like 3 37878672 BF031714 3p21.3 Hs.475963 18

molecular_function

phosphoprotein phosphatase activity

cellular_component

nucleus

biological_process

hydrolase activity

 
222628_s_at 0.539 7.225 5.718 3.858e-05 0.037 2.326 REV1 REV1 homolog (S. cerevisiae) 2 -99383369 AA195405 2q11.1-q11.2 Hs.443077 27

magnesium ion binding

damaged DNA binding

DNA-directed DNA polymerase activity

protein binding

intracellular

nucleus

DNA replication

DNA repair

response to DNA damage stimulus

response to UV

transferase activity

deoxycytidyl transferase activity

error-prone postreplication DNA repair

 
228084_at 0.819 7.162 5.716 3.873e-05 0.037 2.322 PLA2G12A phospholipase A2, group XIIA 4 -110850594 AI767751 4q25 Hs.389452 10

calcium ion binding

extracellular region

intracellular

cytoplasm

endoplasmic reticulum

Golgi apparatus

phospholipid metabolic process

biological_process

lipid catabolic process

hydrolase activity

calcium-dependent phospholipase A2 activity

Glycerophospholipid metabolism

Ether lipid metabolism

Arachidonic acid metabolism

Linoleic acid metabolism

alpha-Linolenic acid metabolism

Metabolic pathways

MAPK signaling pathway

Vascular smooth muscle contraction

VEGF signaling pathway

Fc epsilon RI signaling pathway

Long-term depression

GnRH signaling pathway

238047_at 3.763 5.314 5.692 4.049e-05 0.037 2.284 RP13-102H20.1 hypothetical protein FLJ30058 X 130019896 AA405456 Xq26.1 Hs.22905 5

intracellular

signal transduction

 
219015_s_at -0.799 4.438 -5.686 4.090e-05 0.037 2.275 ALG13 asparagine-linked glycosylation 13 homolog (S. cerevisiae) X 110811068 NM_018466 Xq23 Hs.443061 14

N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity

endoplasmic reticulum

carbohydrate metabolic process

transferase activity, transferring hexosyl groups

carbohydrate binding

lipid glycosylation

N-Glycan biosynthesis

Metabolic pathways

220183_s_at 0.785 6.738 5.665 4.258e-05 0.038 2.240 NUDT6 nudix (nucleoside diphosphate linked moiety X)-type motif 6 4 -124033248, -124033248 NM_007083 4q26 Hs.558459 15

cellular_component

growth factor activity

biological_process

hydrolase activity

 
203423_at 1.720 6.369 5.652 4.359e-05 0.038 2.220 RBP1 retinol binding protein 1, cellular 3 -140727937, -140727317, -140718965 NM_002899 3q23 Hs.529571 31

transporter activity

cytoplasm

transport

lipid binding

retinal binding

retinol binding

retinol metabolic process

retinoic acid metabolic process

 
215307_at 0.639 3.799 5.640 4.458e-05 0.038 2.200 ZNF529 zinc finger protein 529 19 -41762996, -41726357, -41726357 AL109722 19q13.13 Hs.708146 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1564190_x_at 0.680 4.303 5.634 4.509e-05 0.038 2.190 ZNF519 zinc finger protein 519 18 -14094723 AK096748 18p11.21 Hs.352635 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
232932_at 0.563 5.416 5.630 4.542e-05 0.038 2.184 LOC645030 hypothetical protein LOC645030 1   AU145140 1p31.3 Hs.632410      
215554_at 0.947 5.133 5.626 4.580e-05 0.038 2.176 GPLD1 glycosylphosphatidylinositol specific phospholipase D1 6 -24581304, -24536383 AV699786 6p22.3-p22.2 Hs.533291 26

glycosylphosphatidylinositol phospholipase D activity

extracellular region

hydrolase activity

Glycosylphosphatidylinositol(GPI)-anchor biosynthesis

204400_at 0.654 4.839 5.576 5.034e-05 0.040 2.094 EFS embryonal Fyn-associated substrate 14 -22895450 NM_005864 14q11.2-q12 Hs.24587 8

cytoplasm

cell adhesion

intracellular signaling cascade

SH3 domain binding

 
210611_s_at -1.077 6.975 -5.573 5.061e-05 0.040 2.089 DTNA dystrobrevin, alpha 18 30327251, 30327251, 30327251, 30427279, 30544193, 30589937, 30589937, 30652299, 30652299 U26744 18q12 Hs.643454 38

calcium ion binding

protein binding

cytoplasm

striated muscle contraction

signal transduction

neuromuscular synaptic transmission

zinc ion binding

cell junction

synapse

 
222975_s_at -0.728 10.872 -5.529 5.492e-05 0.042 2.018 CSDE1 cold shock domain containing E1, RNA-binding 1 -115061060, -115061060, -115061059 AI423180 1p22 Hs.69855 25

DNA binding

RNA binding

protein binding

cytoplasm

regulation of transcription, DNA-dependent

male gonad development

 
200998_s_at 0.577 6.621 5.526 5.531e-05 0.042 2.012 CKAP4 cytoskeleton-associated protein 4 12 -105155789 AW029619 12q23.3 Hs.714862 Hs.74368 22

membrane fraction

endoplasmic reticulum

membrane

integral to membrane

 
210807_s_at 0.844 4.907 5.508 5.722e-05 0.042 1.982 SLC16A7 solute carrier family 16, member 7 (monocarboxylic acid transporter 2) 12 58369392 AF049608 12q13 Hs.439643 8

pyruvate secondary active transmembrane transporter activity

membrane fraction

plasma membrane

integral to plasma membrane

transport

pyruvate transport

symporter activity

secondary active monocarboxylate transmembrane transporter activity

organic anion transport

 
228332_s_at -0.423 9.953 -5.501 5.790e-05 0.042 1.972 C11orf31 chromosome 11 open reading frame 31 11 57265297 AA526939 11q12.1 Hs.655373 Hs.719147 6

selenium binding

cell redox homeostasis

 
207236_at 0.624 4.598 5.481 6.019e-05 0.043 1.938 ZNF345 zinc finger protein 345 19 42033106 NM_003419 19q13.12 Hs.362324 5

negative regulation of transcription from RNA polymerase II promoter

DNA binding

specific RNA polymerase II transcription factor activity

RNA polymerase III transcription factor activity

intracellular

nucleus

regulation of transcription from RNA polymerase III promoter

zinc ion binding

regulation of transcription

metal ion binding

 
212915_at -1.274 9.177 -5.464 6.212e-05 0.044 1.910 PDZRN3 PDZ domain containing ring finger 3 3 -73514341 AL569804 3p13 Hs.719126 9

protein binding

zinc ion binding

metal ion binding

 
224928_at -0.733 9.894 -5.446 6.430e-05 0.045 1.880 SETD7 SET domain containing (lysine methyltransferase) 7 4 -140646641 AK024846 4q28 Hs.480792 21

protein binding

nucleus

chromosome

regulation of transcription, DNA-dependent

methyltransferase activity

chromatin modification

transferase activity

histone-lysine N-methyltransferase activity

histone-lysine N-methyltransferase activity

Lysine degradation

217551_at 0.686 3.983 5.439 6.519e-05 0.045 1.868 LOC441453 similar to olfactory receptor, family 7, subfamily A, member 17 11   AA719797 11p15.1 Hs.523504 1    
226592_at 0.530 5.056 5.430 6.635e-05 0.045 1.852 ZNF618 zinc finger protein 618 9 115678382 AA031404 9q32 Hs.349208 2

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

protein dimerization activity

 
223680_at 0.496 3.733 5.424 6.708e-05 0.045 1.843 ZNF607 zinc finger protein 607 19 -42879115 BC005085 19q13.1 Hs.116622 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
243924_at 1.088 3.740 5.398 7.042e-05 0.045 1.800 LOC100127980 hypothetical protein LOC100127980 19   AA781404 19q13.12 Hs.595153 1    
244428_at 0.521 4.351 5.394 7.103e-05 0.045 1.793 DNMT3A DNA (cytosine-5-)-methyltransferase 3 alpha 2 -25357824, -25309348, -25309348, -25309348 AW572279 2p23 Hs.515840 54

euchromatin

DNA binding

DNA (cytosine-5-)-methyltransferase activity

protein binding

nucleus

cytoplasm

DNA methylation

genetic imprinting

methyltransferase activity

zinc ion binding

nuclear matrix

transferase activity

metal ion binding

Cysteine and methionine metabolism

Metabolic pathways

239093_at 0.802 4.587 5.372 7.398e-05 0.045 1.757 DHDPSL dihydrodipicolinate synthase-like, mitochondrial 10 99334091 BG165743 10q24.2 Hs.180346 4

mitochondrion

metabolic process

lyase activity

 
231871_at 0.578 4.686 5.327 8.069e-05 0.049 1.681 GPR180 G protein-coupled receptor 180 13 94052104 AU160685 13q32.1 Hs.657472 7

membrane

integral to membrane

 
59625_at -0.422 7.889 -5.322 8.141e-05 0.049 1.673 NOL3 nucleolar protein 3 (apoptosis repressor with CARD domain) 16 65765370 AI912351 16q21-q23 Hs.513667 22

RNA binding

intracellular

nucleus

nucleolus

cytoplasm

cytosol

mRNA processing

anti-apoptosis

RNA splicing

identical protein binding

regulation of apoptosis

 
222858_s_at 0.573 5.408 5.315 8.264e-05 0.049 1.660 DAPP1 dual adaptor of phosphotyrosine and 3-phosphoinositides 4 100957003 AI632216 4q25-q27 Hs.436271 Hs.708484 15

protein tyrosine phosphatase activity

protein binding

phospholipid binding

cellular_component

cytoplasm

protein amino acid dephosphorylation

signal transduction

membrane

B cell receptor signaling pathway

200994_at -0.428 10.164 -5.305 8.418e-05 0.049 1.643 IPO7 importin 7 11 9362744 BG291787 11p15.4 Hs.718440 22

protein import into nucleus, docking

small GTPase regulator activity

transporter activity

soluble fraction

nucleus

nuclear pore

cytoplasm

intracellular protein transport

signal transduction

Ran GTPase binding

protein transporter activity

histone binding

interspecies interaction between organisms

 
1553971_a_at -1.302 6.969 -5.295 8.573e-05 0.050 1.627 GATS GATS, stromal antigen 3 opposite strand 7 -99644496, -99636215 AL831967 7q22.1 Hs.556063 Hs.718406 4    
218312_s_at 0.819 7.394 5.289 8.685e-05 0.050 1.616 ZSCAN18 zinc finger and SCAN domain containing 18 19 -63310783, -63287021, -63287021 NM_023926 19q13.43 Hs.235390 5

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
212886_at -0.645 9.167 -5.276 8.898e-05 0.050 1.595 CCDC69 coiled-coil domain containing 69 5 -150540805 AL080169 5q33.1 Hs.655336 3    
242056_at 0.636 7.261 5.276 8.901e-05 0.050 1.594 TRIM45 tripartite motif-containing 45 1 -117455199 AI793200 1p13.1 Hs.301526 8

protein binding

intracellular

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
228450_at 0.703 3.691 5.275 8.921e-05 0.050 1.592 PLEKHA7 pleckstrin homology domain containing, family A member 7 11 -16765787 AA758861 11p15.1 Hs.12332 4

protein binding

 
221432_s_at 0.586 7.402 5.268 9.032e-05 0.050 1.581 SLC25A28 solute carrier family 25, member 28 10 -101360264 NM_031212 10q23-q24 Hs.403790 6

binding

iron ion binding

mitochondrion

mitochondrial inner membrane

ion transport

iron ion transport

membrane

integral to membrane

 
218211_s_at 0.759 7.239 5.262 9.141e-05 0.050 1.571 MLPH melanophilin 2 238060616 NM_024101 2q37.3 Hs.102406 23

protein binding

cytoplasm

intracellular protein transport

zinc ion binding

Rab GTPase binding

metal ion binding

 
217609_at 0.562 4.405 5.251 9.341e-05 0.050 1.552 LRRC23 leucine rich repeat containing 23 12 6884157 BG420747 12p13 Hs.155586 10

molecular_function

protein binding

cellular_component

biological_process

 
200758_s_at -0.631 11.205 -5.235 9.623e-05 0.050 1.526 NFE2L1 nuclear factor (erythroid-derived 2)-like 1 17 43480684 AI361227 17q21.3 Hs.514284 20

transcription factor activity

transcription cofactor activity

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

heme biosynthetic process

inflammatory response

anatomical structure morphogenesis

sequence-specific DNA binding

protein dimerization activity

 
237560_at 0.716 5.661 5.220 9.917e-05 0.051 1.499 MRPS5 mitochondrial ribosomal protein S5 2 -95116678 AI015881 2p11.2-q11.2 Hs.655259 9

RNA binding

structural constituent of ribosome

protein binding

intracellular

mitochondrion

ribosome

translation

 
242323_at 0.688 8.505 5.208 1.015e-04 0.051 1.479 PLA2G12A phospholipase A2, group XIIA 4 -110850594 AV714268 4q25 Hs.389452 10

calcium ion binding

extracellular region

intracellular

cytoplasm

endoplasmic reticulum

Golgi apparatus

phospholipid metabolic process

biological_process

lipid catabolic process

hydrolase activity

calcium-dependent phospholipase A2 activity

Glycerophospholipid metabolism

Ether lipid metabolism

Arachidonic acid metabolism

Linoleic acid metabolism

alpha-Linolenic acid metabolism

Metabolic pathways

MAPK signaling pathway

Vascular smooth muscle contraction

VEGF signaling pathway

Fc epsilon RI signaling pathway

Long-term depression

GnRH signaling pathway

220340_at 1.262 6.134 5.207 1.016e-04 0.051 1.478 KIAA1772 KIAA1772 18 17076200 NM_024935 18q11.1-q11.2 Hs.149020 4

membrane

integral to membrane

 
203466_at 0.485 6.450 5.186 1.059e-04 0.053 1.441 MPV17 MpV17 mitochondrial inner membrane protein 2 -27385863 NM_002437 2p23.3 Hs.75659 17

mitochondrial genome maintenance

molecular_function

mitochondrion

mitochondrial inner membrane

integral to peroxisomal membrane

oxygen and reactive oxygen species metabolic process

membrane

integral to membrane

homeostatic process

 
231358_at 0.580 5.244 5.171 1.089e-04 0.054 1.416 MRO maestro 18 -46575487, -46575487 BE465760 18q21 Hs.30495 6

binding

nucleus

nucleolus

 
204671_s_at 0.738 5.498 5.139 1.158e-04 0.057 1.362 ANKRD6 ankyrin repeat domain 6 6 90199615 BE677131 6q14.2-q16.1 Hs.702213 9

protein binding

 
1554485_s_at 0.736 3.900 5.121 1.199e-04 0.058 1.331 TMEM37 transmembrane protein 37 2 119905915 BI825302 2q14.2 Hs.26216 3

voltage-gated ion channel activity

calcium channel activity

calcium ion binding

ion transport

calcium ion transport

membrane

integral to membrane

 
1556051_a_at 0.825 4.579 5.111 1.223e-04 0.058 1.314 BICD1 bicaudal D homolog 1 (Drosophila) 12 32151451 CA777994 12p11.2-p11.1 Hs.505202 17

structural constituent of cytoskeleton

protein binding

Golgi apparatus

cytoskeleton

RNA processing

transport

intracellular mRNA localization

anatomical structure morphogenesis

 
201906_s_at 1.109 7.024 5.110 1.226e-04 0.058 1.312 CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like 3 37878672 NM_005808 3p21.3 Hs.475963 18

molecular_function

phosphoprotein phosphatase activity

cellular_component

nucleus

biological_process

hydrolase activity

 
224819_at 0.644 6.667 5.108 1.230e-04 0.058 1.309 TCEAL8 transcription elongation factor A (SII)-like 8 X -102394578 AI743979 Xq22.1 Hs.389734 4

nucleus

regulation of transcription

 
211654_x_at 0.610 6.355 5.099 1.252e-04 0.058 1.293 HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 6 -32735634 M17565 6p21.3 Hs.409934 Hs.534322 Hs.713773 998

antigen processing and presentation of peptide or polysaccharide antigen via MHC class II

plasma membrane

immune response

immune response

membrane

membrane

integral to membrane

MHC class II receptor activity

MHC class II protein complex

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

209605_at 0.880 8.090 5.097 1.256e-04 0.058 1.290 TST thiosulfate sulfurtransferase (rhodanese) 22 -35736851 D87292 22q13.1 Hs.474783 25

thiosulfate sulfurtransferase activity

mitochondrion

mitochondrial matrix

plasma membrane

sulfate transport

cyanate catabolic process

transferase activity

 
209439_s_at 0.580 6.957 5.093 1.268e-04 0.058 1.282 PHKA2 phosphorylase kinase, alpha 2 (liver) X -18820336 D38616 Xp22.2-p22.1 Hs.54941 Hs.607628 Hs.622882 29

catalytic activity

phosphorylase kinase activity

calmodulin binding

plasma membrane

phosphorylase kinase complex

carbohydrate metabolic process

glycogen metabolic process

generation of precursor metabolites and energy

protein modification process

Calcium signaling pathway

Insulin signaling pathway

234000_s_at 0.571 6.614 5.073 1.318e-04 0.058 1.248 PTPLAD1 protein tyrosine phosphatase-like A domain containing 1 15 63609879 AJ271091 15q22.2 Hs.512973 13

molecular_function

GTPase activator activity

protein binding

cellular_component

I-kappaB kinase/NF-kappaB cascade

activation of JUN kinase activity

small GTPase mediated signal transduction

Rho protein signal transduction

membrane

integral to membrane

Rac protein signal transduction

 
1555363_s_at 0.402 5.734 5.056 1.361e-04 0.059 1.219 LOC284440 hypothetical LOC284440 19 -19728182 BC034236 19p13.11 Hs.665307 4    
218611_at -1.447 7.569 -5.040 1.406e-04 0.060 1.191 IER5 immediate early response 5 1 179324260 NM_016545 1q25.3 Hs.716489 8    
224558_s_at -0.940 9.293 -5.031 1.430e-04 0.060 1.176 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 11 65021808 AI446756 11q13.1 Hs.642877 Hs.714394 8    
206847_s_at 0.922 7.004 5.027 1.441e-04 0.060 1.169 HOXA7 homeobox A7 7 -27159862 AF026397 7p15-p14 Hs.660918 24

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anterior/posterior pattern formation

transcription repressor activity

sequence-specific DNA binding

negative regulation of keratinocyte differentiation

positive regulation of transcription from RNA polymerase II promoter

embryonic skeletal system morphogenesis

 
227337_at -1.145 7.241 -5.023 1.453e-04 0.060 1.161 ANKRD37 ankyrin repeat domain 37 4 186554833 AA886870 4q35.1 Hs.508154 4

nucleus

cytoplasm

 
218639_s_at 0.529 6.765 5.008 1.495e-04 0.060 1.136 ZXDC ZXD family zinc finger C 3 -127652648, -127639133 NM_025112 3q21.3 Hs.440049 Hs.711046 8

nucleic acid binding

transcription factor activity

intracellular

nucleus

zinc ion binding

transcription activator activity

LRR domain binding

identical protein binding

positive regulation of transcription

metal ion binding

C2H2 zinc finger domain binding

 
205951_at -2.775 11.141 -5.005 1.503e-04 0.060 1.131 MYH1 myosin, heavy chain 1, skeletal muscle, adult 17 -10336348 NM_005963 17p13.1 Hs.689619 30

nucleotide binding

motor activity

actin binding

calmodulin binding

ATP binding

nucleolus

cytoplasm

striated muscle thick filament

focal adhesion

striated muscle contraction

myosin complex

myofibril

A band

Tight junction

219604_s_at 0.404 4.535 5.004 1.508e-04 0.060 1.128 ZNF3 zinc finger protein 3 7 -99505529, -99499588 NM_017715 7q22.1 Hs.435302 10

transcription factor activity

intracellular

nucleus

nucleus

nucleolus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

cell differentiation

identical protein binding

leukocyte activation

metal ion binding

 
217555_at -0.517 5.076 -5.000 1.518e-04 0.060 1.123 SMC1A structural maintenance of chromosomes 1A X -53417794 AI042030 Xp11.22-p11.21 Hs.211602 47

cell cycle checkpoint

nucleotide binding

nuclear mRNA splicing, via spliceosome

condensed chromosome kinetochore

condensed nuclear chromosome

chromatin binding

microtubule motor activity

protein binding

ATP binding

nucleus

chromosome

cytoplasm

DNA repair

response to DNA damage stimulus

cell cycle

mitotic spindle organization

mitotic sister chromatid cohesion

meiosis

cohesin core heterodimer

response to radiation

DNA damage response, signal transduction

protein heterodimerization activity

chromosome organization

cell division

Cell cycle

210210_at 0.396 6.120 4.997 1.528e-04 0.060 1.117 MPZL1 myelin protein zero-like 1 1 165957810 AF181660 1q24.2 Hs.493919 Hs.603116 19

structural molecule activity

protein binding

integral to plasma membrane

transmembrane receptor protein tyrosine kinase signaling pathway

cell-cell signaling

membrane

Cell adhesion molecules (CAMs)

216197_at 0.504 4.660 4.980 1.580e-04 0.061 1.087 ATF7IP activating transcription factor 7 interacting protein 12 14409877 AK021569 12p13.1 Hs.714407 17

negative regulation of transcription from RNA polymerase II promoter

transcription corepressor activity

protein binding

nucleus

transcription factor complex

cytoplasm

DNA methylation

ATPase activity

interspecies interaction between organisms

regulation of transcription

positive regulation of transcription, DNA-dependent

regulation of transcriptional preinitiation complex assembly

 
222380_s_at 0.582 6.494 4.973 1.601e-04 0.061 1.075 PDCD6 programmed cell death 6 5 324735 AI907083 5p15.33 Hs.50823 36

calcium ion binding

nucleus

endoplasmic reticulum

apoptosis

induction of apoptosis by extracellular signals

membrane

calcium-dependent protein binding

response to calcium ion

 
226452_at 0.487 6.503 4.956 1.656e-04 0.063 1.045 PDK1 pyruvate dehydrogenase kinase, isozyme 1 2 173129024 AU146532 2q31.1 Hs.470633 52

two-component sensor activity

nucleotide binding

pyruvate dehydrogenase (acetyl-transferring) kinase activity

ATP binding

mitochondrion

mitochondrial matrix

carbohydrate metabolic process

glucose metabolic process

signal transduction

small GTPase mediated signal transduction

transferase activity

peptidyl-histidine phosphorylation

T cell receptor signaling pathway

Fc epsilon RI signaling pathway

Neurotrophin signaling pathway

1558487_a_at 0.625 7.829 4.949 1.677e-04 0.063 1.034 TMED4 transmembrane emp24 protein transport domain containing 4 7 -44585286 AK074557 7p13 Hs.598832 Hs.715273 11

endoplasmic reticulum

transport

membrane

integral to membrane

 
228920_at 0.563 5.963 4.941 1.704e-04 0.063 1.020 ZNF260 zinc finger protein 260 19 -41693433 BE328273 19q13.12 Hs.18103 5

DNA binding

intracellular

nucleus

multicellular organismal development

zinc ion binding

regulation of transcription

metal ion binding

 
220703_at 1.484 7.471 4.940 1.709e-04 0.063 1.018 C10orf110 chromosome 10 open reading frame 110 10 1058576 NM_018470 10p15.3 Hs.644603 2    
1555793_a_at 0.748 4.722 4.937 1.718e-04 0.063 1.013 ZFP82 zinc finger protein 82 homolog (mouse) 19 -41574700 AL834267 19q13.12 Hs.558734 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
223044_at 0.621 9.868 4.933 1.734e-04 0.064 1.005 SLC40A1 solute carrier family 40 (iron-regulated transporter), member 1 2 -190133560 AL136944 2q32 Hs.643005 73

iron ion transmembrane transporter activity

iron ion binding

cytoplasm

plasma membrane

integral to plasma membrane

ion transport

iron ion transport

cellular iron ion homeostasis

synaptic vesicle

anatomical structure morphogenesis

 
229012_at 0.564 5.291 4.911 1.810e-04 0.066 0.966 C9orf24 chromosome 9 open reading frame 24 9 -34369016, -34369016 AW269443 9p13.3 Hs.50334 8    
212689_s_at -0.981 6.775 -4.903 1.838e-04 0.066 0.953 KDM3A lysine (K)-specific demethylase 3A 2 86521781, 86522094 AA524505 2p11.2 Hs.557425 11

iron ion binding

nucleus

cytoplasm

spermatogenesis

zinc ion binding

hormone-mediated signaling

oxidoreductase activity

chromatin modification

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

cell differentiation

androgen receptor signaling pathway

histone H3-K9 demethylation

positive regulation of transcription

formaldehyde biosynthetic process

metal ion binding

androgen receptor binding

oxidation reduction

 
1553102_a_at -0.742 8.649 -4.890 1.885e-04 0.067 0.931 CCDC69 coiled-coil domain containing 69 5 -150540805 BC016647 5q33.1 Hs.655336 3    
218959_at -0.605 7.426 -4.883 1.909e-04 0.067 0.919 HOXC10 homeobox C10 12 52665212 NM_017409 12q13.3 Hs.44276 13

skeletal system development

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

positive regulation of cell proliferation

anterior/posterior pattern formation

proximal/distal pattern formation

cyclin-dependent protein kinase activating kinase holoenzyme complex

spinal cord motor neuron cell fate specification

embryonic limb morphogenesis

sequence-specific DNA binding

neuromuscular process

 
206869_at 0.479 5.324 4.882 1.916e-04 0.067 0.916 CHAD chondroadherin 17 -45896851 NM_001267 17q21.33 Hs.97220 6

regulation of cell growth

extracellular matrix structural constituent

protein binding

extracellular region

proteinaceous extracellular matrix

Focal adhesion

ECM-receptor interaction

219355_at 0.882 5.146 4.880 1.922e-04 0.067 0.913 CXorf57 chromosome X open reading frame 57 X 105741815 NM_018015 Xq22.3 Hs.274267 5    
209419_at 0.332 3.388 4.877 1.933e-04 0.067 0.908 THOC5 THO complex 5 22 -28234155, -28234155 AB023200 22q12.2 Hs.75361 18

protein binding

nucleus

cytoplasm

cell differentiation

negative regulation of macrophage differentiation

 
205374_at -0.463 13.454 -4.872 1.954e-04 0.067 0.898 SLN sarcolipin 11 -107083310 NM_003063 11q22-q23 Hs.334629 12

membrane

integral to membrane

sarcoplasmic reticulum

enzyme regulator activity

regulation of calcium ion transport

 
225308_s_at 0.658 6.133 4.867 1.974e-04 0.067 0.889 TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 2 159533391 AB051515 2q24.2 Hs.61590 6

binding

plasma membrane

postsynaptic density

cell junction

synapse

postsynaptic membrane

 
227340_s_at -1.264 5.307 -4.860 1.999e-04 0.067 0.879 RGMB RGM domain family, member B 5 98132898 AL117590 5q15 Hs.526902 5

ER-Golgi intermediate compartment

plasma membrane

cell adhesion

signal transduction

BMP signaling pathway

identical protein binding

positive regulation of transcription

anchored to plasma membrane

 
224467_s_at 0.407 7.400 4.853 2.028e-04 0.068 0.865 PDCD2L programmed cell death 2-like 19 39587142 BC006146 19q13.11 Hs.515344 5

cytoplasm

 
213572_s_at -0.722 6.314 -4.846 2.056e-04 0.068 0.853 SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 6 -2778732 AI554300 6p25 Hs.381167 18

serine-type endopeptidase inhibitor activity

cytoplasm

peptidase inhibitor activity

 
212172_at 0.552 5.354 4.844 2.064e-04 0.068 0.850 AK2 adenylate kinase 2 1 -33251169, -33246172 AW277253 1p34 Hs.470907 16

nucleotide binding

adenylate kinase activity

ATP binding

mitochondrion

mitochondrial intermembrane space

mitochondrial intermembrane space

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

transferase activity

nucleoside kinase activity

Purine metabolism

Metabolic pathways

49329_at 0.359 6.655 4.843 2.069e-04 0.068 0.848 KLHL22 kelch-like 22 (Drosophila) 22 -19125805 N38751 22q11.21 Hs.517419 6

protein binding

 
220235_s_at -0.987 6.973 -4.834 2.107e-04 0.068 0.832 C1orf103 chromosome 1 open reading frame 103 1 -111291334 NM_018372 1p13.3 Hs.25245 7

protein binding

 
202641_at 0.544 6.960 4.832 2.115e-04 0.068 0.828 ARL3 ADP-ribosylation factor-like 3 10 -104423477 NM_004311 10q23.3 Hs.182215 18

nucleotide binding

magnesium ion binding

GTP binding

intracellular

nucleus

Golgi apparatus

spindle

cell cycle

small GTPase mediated signal transduction

membrane

cell division

 
201538_s_at -0.713 7.274 -4.828 2.130e-04 0.069 0.822 DUSP3 dual specificity phosphatase 3 17 -39199014 NM_004090 17q21 Hs.181046 21

protein tyrosine phosphatase activity

protein tyrosine phosphatase activity

nucleoplasm

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

MAPK signaling pathway

203208_s_at -0.446 7.452 -4.823 2.150e-04 0.069 0.813 MTFR1 mitochondrial fission regulator 1 8 66719441, 66719441, 66744661 NM_014637 8q13.1 Hs.584788 8

mitochondrion

plasma membrane

 
241458_at -0.436 4.612 -4.814 2.188e-04 0.069 0.798 SETD2 SET domain containing 2 3 -47032903 AI868267 3p21.31 Hs.517941 18

DNA binding

protein binding

nucleus

methyltransferase activity

oxidoreductase activity

chromatin modification

transferase activity

histone-lysine N-methyltransferase activity

regulation of transcription

transition metal ion binding

Lysine degradation

210694_s_at 0.677 5.799 4.813 2.195e-04 0.069 0.795 MID1 midline 1 (Opitz/BBB syndrome) X -10373595, -10373595, -10373595 AF041209 Xp22 Hs.27695 38

microtubule cytoskeleton organization

protein binding

intracellular

cytoplasm

microtubule

microtubule associated complex

negative regulation of microtubule depolymerization

pattern specification process

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

Ubiquitin mediated proteolysis

221027_s_at 0.786 8.404 4.800 2.251e-04 0.071 0.773 PLA2G12A phospholipase A2, group XIIA 4 -110850594 NM_030821 4q25 Hs.389452 10

calcium ion binding

extracellular region

intracellular

cytoplasm

endoplasmic reticulum

Golgi apparatus

phospholipid metabolic process

biological_process

lipid catabolic process

hydrolase activity

calcium-dependent phospholipase A2 activity

Glycerophospholipid metabolism

Ether lipid metabolism

Arachidonic acid metabolism

Linoleic acid metabolism

alpha-Linolenic acid metabolism

Metabolic pathways

MAPK signaling pathway

Vascular smooth muscle contraction

VEGF signaling pathway

Fc epsilon RI signaling pathway

Long-term depression

GnRH signaling pathway

242915_at 1.139 3.739 4.795 2.274e-04 0.071 0.764 ZNF682 zinc finger protein 682 19 -19976226, -19976226 AA603590 19p12 Hs.306298 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
225719_s_at 0.416 7.148 4.783 2.329e-04 0.072 0.742 MRPL55 mitochondrial ribosomal protein L55 1 -226361002 BG497783 1q42.13 Hs.63236 11

structural constituent of ribosome

mitochondrion

mitochondrial large ribosomal subunit

ribosome

translation

 
200593_s_at -0.402 7.885 -4.776 2.360e-04 0.072 0.731 HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 1 -243080224 BC003621 1q44 Hs.106212 47

nucleotide binding

nuclear mRNA splicing, via spliceosome

DNA binding

RNA binding

protein binding

ATP binding

nucleus

spliceosomal complex

RNA splicing

cell surface

heterogeneous nuclear ribonucleoprotein complex

 
228728_at 0.593 9.498 4.759 2.439e-04 0.074 0.701 C7orf58 chromosome 7 open reading frame 58 7 120415986, 120416680 BF724137 7q31.31 Hs.189652 13

endoplasmic reticulum

 
226822_at 0.646 5.658 4.759 2.440e-04 0.074 0.701 STOX2 storkhead box 2 4 185063502 AL512713 4q35.1 Hs.21958 Hs.696657 3    
204422_s_at 1.314 3.435 4.759 2.442e-04 0.074 0.700 FGF2 fibroblast growth factor 2 (basic) 4 123967312 NM_002006 4q26-q27 Hs.284244 320

activation of MAPKK activity

activation of MAPK activity

induction of an organ

positive regulation of protein amino acid phosphorylation

protein binding

extracellular region

extracellular region

extracellular space

apoptosis

chemotaxis

signal transduction

Ras protein signal transduction

multicellular organismal development

nervous system development

growth factor activity

heparin binding

negative regulation of cell proliferation

fibroblast growth factor receptor signaling pathway

organ morphogenesis

glial cell differentiation

positive regulation of granule cell precursor proliferation

lung development

positive regulation of blood vessel endothelial cell migration

negative regulation of blood vessel endothelial cell migration

positive regulation of cell differentiation

positive regulation of angiogenesis

regulation of retinal cell programmed cell death

positive regulation of epithelial cell proliferation

positive regulation of cardiac muscle cell proliferation

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

228093_at 0.448 5.602 4.753 2.471e-04 0.074 0.690 ZNF599 zinc finger protein 599 19 -39940818 AW300140 19q13.11 Hs.590961 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
226764_at 0.497 5.671 4.747 2.502e-04 0.075 0.678 ZNF827 zinc finger protein 827 4 -146901337 BG542955 4q31.21-q31.22 Hs.133916 Hs.633543 7

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
225564_at 0.626 5.002 4.712 2.678e-04 0.079 0.618 SPATA13 spermatogenesis associated 13 13 23632886 AW269397 13q12.12 Hs.657121 7

Rho guanyl-nucleotide exchange factor activity

intracellular

regulation of Rho protein signal transduction

 
221838_at 0.411 4.960 4.698 2.757e-04 0.080 0.592 KLHL22 kelch-like 22 (Drosophila) 22 -19125805 N38751 22q11.21 Hs.517419 6

protein binding

 
204784_s_at -1.650 8.892 -4.691 2.796e-04 0.081 0.580 MLF1 myeloid leukemia factor 1 3 159771646 NM_022443 3q25.1 Hs.85195 14

myeloid progenitor cell differentiation

DNA binding

nucleus

cytoplasm

transcription

cell cycle

cell cycle arrest

multicellular organismal development

protein domain specific binding

cell differentiation

 
223373_s_at 0.650 8.632 4.680 2.858e-04 0.082 0.560 PLA2G12A phospholipase A2, group XIIA 4 -110850594 AF306567 4q25 Hs.389452 10

calcium ion binding

extracellular region

intracellular

cytoplasm

endoplasmic reticulum

Golgi apparatus

phospholipid metabolic process

biological_process

lipid catabolic process

hydrolase activity

calcium-dependent phospholipase A2 activity

Glycerophospholipid metabolism

Ether lipid metabolism

Arachidonic acid metabolism

Linoleic acid metabolism

alpha-Linolenic acid metabolism

Metabolic pathways

MAPK signaling pathway

Vascular smooth muscle contraction

VEGF signaling pathway

Fc epsilon RI signaling pathway

Long-term depression

GnRH signaling pathway

212817_at -0.663 7.814 -4.677 2.873e-04 0.082 0.555 DNAJB5 DnaJ (Hsp40) homolog, subfamily B, member 5 9 34979724, 34980266 AK023253 9p13.3 Hs.237506 5

protein folding

response to unfolded protein

heat shock protein binding

unfolded protein binding

 
227074_at 0.611 6.817 4.671 2.906e-04 0.082 0.545 LOC100131564 hypothetical protein LOC100131564 1   AA524669 1p22.1 Hs.648647      
212928_at 0.462 6.685 4.664 2.949e-04 0.082 0.532 TSPYL4 TSPY-like 4 6 -116677823 AL050331 6q22.1 Hs.284141 7

nucleus

nucleosome assembly

 
1558251_a_at 0.456 3.079 4.662 2.962e-04 0.082 0.528 ZNF587 zinc finger protein 587 19 63053080 AK055448 19q13.43 Hs.642598 Hs.715493 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
204608_at 0.673 5.290 4.660 2.971e-04 0.082 0.525 ASL argininosuccinate lyase 7 65178210, 65178268 NM_000048 7cen-q11.2 Hs.632015 19

urea cycle

argininosuccinate metabolic process

response to hypoxia

kidney development

liver development

argininosuccinate lyase activity

cytoplasm

arginine catabolic process

response to nutrient

locomotory behavior

cellular amino acid biosynthetic process

post-embryonic development

lyase activity

ammonia assimilation cycle

arginine biosynthetic process via ornithine

response to peptide hormone stimulus

response to steroid hormone stimulus

response to glucocorticoid stimulus

response to cAMP

Alanine, aspartate and glutamate metabolism

Arginine and proline metabolism

Metabolic pathways

202669_s_at 0.495 5.383 4.646 3.060e-04 0.084 0.499 EFNB2 ephrin-B2 13 -105940096 U16797 13q33 Hs.149239 71

lymph vessel development

plasma membrane

integral to plasma membrane

cell-cell signaling

multicellular organismal development

nervous system development

organ morphogenesis

cell differentiation

interspecies interaction between organisms

ephrin receptor binding

Axon guidance

243612_at 0.562 4.969 4.644 3.068e-04 0.084 0.497 NSD1 nuclear receptor binding SET domain protein 1 5 176492685, 176493438 AL526448 5q35.2-q35.3 Hs.106861 36

negative regulation of transcription from RNA polymerase II promoter

chromatin binding

transcription corepressor activity

protein binding

nucleus

methyltransferase activity

zinc ion binding

chromatin modification

histone methylation

transferase activity

ligand-dependent nuclear receptor binding

estrogen receptor binding

histone methyltransferase activity (H4-K20 specific)

regulation of transcription

positive regulation of transcription, DNA-dependent

metal ion binding

retinoid X receptor binding

thyroid hormone receptor binding

histone methyltransferase activity (H3-K36 specific)

androgen receptor binding

Lysine degradation

203773_x_at 0.466 8.645 4.623 3.202e-04 0.087 0.458 BLVRA biliverdin reductase A 7 43764796 NM_000712 7p14-cen Hs.488143 17

biliverdin reductase activity

binding

cytoplasm

zinc ion binding

oxidoreductase activity

heme catabolic process

metal ion binding

oxidation reduction

Porphyrin and chlorophyll metabolism

232184_at -0.406 2.824 -4.621 3.212e-04 0.087 0.456 ALS2 amyotrophic lateral sclerosis 2 (juvenile) 2 -202332427, -202273231 AK023024 2q33.1 Hs.471096 Hs.621812 36

ruffle

guanyl-nucleotide exchange factor activity

Ran guanyl-nucleotide exchange factor activity

protein binding

intracellular

early endosome

centrosome

cytosol

endosome organization

cell death

Rab guanyl-nucleotide exchange factor activity

Rab GTPase binding

Rab GTPase binding

lamellipodium

dendrite

Rac guanyl-nucleotide exchange factor activity

positive regulation of Rac GTPase activity

positive regulation of Rac protein signal transduction

regulation of Rho protein signal transduction

vesicular fraction

protein homodimerization activity

protein complex

protein serine/threonine kinase activator activity

positive regulation of protein kinase activity

neuron projection morphogenesis

regulation of endosome size

Amyotrophic lateral sclerosis (ALS)

91682_at 0.439 5.283 4.605 3.314e-04 0.090 0.428 EXOSC4 exosome component 4 8 145205509 AI571298 8q24.3 Hs.632041 16

3'-5'-exoribonuclease activity

exosome (RNase complex)

RNA binding

exonuclease activity

protein binding

nucleus

nucleolus

cytoplasm

rRNA processing

RNA processing

hydrolase activity

RNA degradation

217993_s_at -0.583 9.801 -4.593 3.397e-04 0.090 0.406 MAT2B methionine adenosyltransferase II, beta 5 162862808, 162865162 NM_013283 5q34-q35 Hs.54642 20

catalytic activity

protein binding

intracellular

nucleus

S-adenosylmethionine biosynthetic process

S-adenosylmethionine biosynthetic process

one-carbon metabolic process

metabolic process

dTDP-4-dehydrorhamnose reductase activity

extracellular polysaccharide biosynthetic process

methionine adenosyltransferase complex

methionine adenosyltransferase regulator activity

methionine adenosyltransferase regulator activity

Cysteine and methionine metabolism

Selenoamino acid metabolism

Biosynthesis of plant hormones

Metabolic pathways

200655_s_at -0.487 10.516 -4.589 3.425e-04 0.090 0.398 CALM1 calmodulin 1 (phosphorylase kinase, delta) 14 89933125 NM_006888 14q24-q31 Hs.282410 Hs.708270 181  

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Glioma

238681_at 0.687 4.511 4.589 3.426e-04 0.090 0.398 GDPD1 glycerophosphodiester phosphodiesterase domain containing 1 17 54652615 R46180 17q22 Hs.631744 6

glycerol metabolic process

lipid metabolic process

glycerophosphodiester phosphodiesterase activity

membrane

integral to membrane

hydrolase activity

 
235753_at 0.724 7.886 4.588 3.433e-04 0.090 0.396 HOXA7 homeobox A7 7 -27159862 AI492051 7p15-p14 Hs.660918 24

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anterior/posterior pattern formation

transcription repressor activity

sequence-specific DNA binding

negative regulation of keratinocyte differentiation

positive regulation of transcription from RNA polymerase II promoter

embryonic skeletal system morphogenesis

 
239203_at -1.309 8.595 -4.586 3.447e-04 0.090 0.393 C7orf53 chromosome 7 open reading frame 53 7 111908143, 111908301 AW014728 7q31.1 Hs.396189 5

membrane

integral to membrane

 
244552_at 0.344 3.580 4.584 3.458e-04 0.090 0.390 ZNF788 zinc finger family member 788 19 12064077 AI190287 19p13.2 Hs.127473  

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
205437_at 0.715 5.822 4.573 3.540e-04 0.092 0.369 ZNF211 zinc finger protein 211 19 62836346 NM_006385 19q13.4 Hs.590977 4

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
200915_x_at -0.523 11.862 -4.570 3.559e-04 0.092 0.364 KTN1 kinectin 1 (kinesin receptor) 14 55116677, 55116677 NM_004986 14q22.1 Hs.509414 30

molecular_function

membrane fraction

endoplasmic reticulum

endoplasmic reticulum membrane

integral to plasma membrane

microtubule-based movement

membrane

 
241602_at 0.343 6.195 4.569 3.566e-04 0.092 0.362 ZNF582 zinc finger protein 582 19 -61586459 BG432829 19q13.43 Hs.244391 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
212762_s_at 0.588 4.482 4.561 3.620e-04 0.092 0.349 TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 10 114699998 AI375916 10q25.3 Hs.593995 246

blood vessel development

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

anti-apoptosis

cell cycle arrest

beta-catenin binding

transcription factor binding

cell proliferation

positive regulation of specific transcription from RNA polymerase II promoter

positive regulation of heparan sulfate proteoglycan biosynthetic process

specific transcriptional repressor activity

protein kinase binding

pancreas development

positive regulation of insulin secretion

regulation of hormone metabolic process

glucose homeostasis

fat cell differentiation

regulation of transcription

myoblast cell fate commitment

Wnt receptor signaling pathway through beta-catenin

beta-catenin-TCF7L2 complex

Wnt signaling pathway

Adherens junction

Melanogenesis

Pathways in cancer

Colorectal cancer

Endometrial cancer

Prostate cancer

Thyroid cancer

Basal cell carcinoma

Acute myeloid leukemia

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

200995_at -0.747 8.955 -4.536 3.806e-04 0.095 0.304 IPO7 importin 7 11 9362744 AI741392 11p15.4 Hs.718440 22

protein import into nucleus, docking

small GTPase regulator activity

transporter activity

soluble fraction

nucleus

nuclear pore

cytoplasm

intracellular protein transport

signal transduction

Ran GTPase binding

protein transporter activity

histone binding

interspecies interaction between organisms

 
242660_at 0.863 3.258 4.536 3.809e-04 0.095 0.303 C10orf112 chromosome 10 open reading frame 112 10   AA846789 10p12.31 Hs.662505 4

membrane

integral to membrane

 
235532_at 0.442 3.365 4.535 3.814e-04 0.095 0.302 PIGM phosphatidylinositol glycan anchor biosynthesis, class M 1 -158264085 AI631888 1q23.2 Hs.552810 7

endoplasmic reticulum

endoplasmic reticulum membrane

membrane

integral to membrane

preassembly of GPI anchor in ER membrane

transferase activity, transferring hexosyl groups

Glycosylphosphatidylinositol(GPI)-anchor biosynthesis

Metabolic pathways

230055_at 0.492 5.283 4.531 3.850e-04 0.095 0.294 KHDC1 KH homology domain containing 1 6 -74007758 AL037414 6q13 Hs.715645 4

RNA binding

membrane

integral to membrane

 
201996_s_at 0.699 5.720 4.523 3.909e-04 0.096 0.280 SPEN spen homolog, transcriptional regulator (Drosophila) 1 16046945 AL524033 1p36.33-p36.11 Hs.558463 21

nucleotide binding

single-stranded DNA binding

transcription factor activity

transcription corepressor activity

RNA binding

protein binding

nucleus

nucleolus

regulation of transcription from RNA polymerase II promoter

Notch signaling pathway

transcription activator activity

interspecies interaction between organisms

negative regulation of transcription, DNA-dependent

 
219981_x_at 0.425 7.115 4.522 3.918e-04 0.096 0.278 ZNF587 zinc finger protein 587 19 63053080 NM_017961 19q13.43 Hs.642598 Hs.715493 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
201132_at -0.576 8.987 -4.521 3.928e-04 0.096 0.276 HNRNPH2 heterogeneous nuclear ribonucleoprotein H2 (H') X 100549846 NM_019597 Xq22 Hs.632828 17

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

nucleoplasm

nucleolus

cytoplasm

cytoskeleton

heterogeneous nuclear ribonucleoprotein complex

 
221872_at 0.749 3.695 4.514 3.980e-04 0.097 0.264 RARRES1 retinoic acid receptor responder (tazarotene induced) 1 3 -159905133, -159897590 AI669229 3q25.32 Hs.131269 11

negative regulation of cell proliferation

membrane

integral to membrane

 
231569_at 0.420 3.402 4.493 4.149e-04 0.100 0.227 TMEM31 transmembrane protein 31 X 102852492 N58489 Xq22.2 Hs.98843 1

membrane

integral to membrane

 
213473_at -0.458 6.935 -4.477 4.290e-04 0.101 0.197 BRAP BRCA1 associated protein 12 -110564332 AL042733 12q24 Hs.530940 12

ubiquitin-protein ligase activity

cytoplasm

zinc ion binding

negative regulation of signal transduction

ligase activity

modification-dependent protein catabolic process

identical protein binding

metal ion binding

 
225876_at 0.713 5.801 4.476 4.293e-04 0.101 0.196 NIPAL3 NIPA-like domain containing 3 1 24614831 T84558 1p36.12-p35.1 Hs.523442 6

membrane

integral to membrane

 
226398_s_at 0.450 7.559 4.476 4.293e-04 0.101 0.196 C10orf4 chromosome 10 open reading frame 4 10 -95418318 AI804930 10q23.33 Hs.658192 7

protein binding

nucleus

 
202203_s_at -0.877 7.181 -4.473 4.322e-04 0.101 0.190 AMFR autocrine motility factor receptor 16 -54952864 NM_001144 16q21 Hs.295137 33

protein polyubiquitination

integral to membrane of membrane fraction

ubiquitin-protein ligase activity

ubiquitin-protein ligase activity

receptor activity

receptor activity

protein binding

endoplasmic reticulum

ubiquitin-dependent protein catabolic process

cell motion

signal transduction

zinc ion binding

membrane

integral to membrane

integral to membrane

ligase activity

integral to endoplasmic reticulum membrane

ER-associated protein catabolic process

ER-associated protein catabolic process

endoplasmic reticulum unfolded protein response

metal ion binding

protein oligomerization

 
220565_at 0.754 4.568 4.471 4.339e-04 0.101 0.187 CCR10 chemokine (C-C motif) receptor 10 17 -38084945 NM_016602 17q21.1-q21.3 Hs.719562 20

receptor activity

G-protein coupled receptor activity

protein binding

plasma membrane

integral to plasma membrane

chemotaxis

signal transduction

G-protein coupled receptor protein signaling pathway

elevation of cytosolic calcium ion concentration

C-C chemokine receptor activity

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

235595_at 0.456 6.625 4.471 4.341e-04 0.101 0.186 ARHGEF2 Rho/Rac guanine nucleotide exchange factor (GEF) 2 1 -154183253, -154183253 AW299534 1q21-q22 Hs.655209 28

cell morphogenesis

guanyl-nucleotide exchange factor activity

intracellular

cytoplasm

Golgi apparatus

spindle

microtubule

tight junction

intracellular protein transport

actin filament organization

negative regulation of microtubule depolymerization

cell cycle

mitosis

intracellular signaling cascade

microtubule binding

zinc ion binding

diacylglycerol binding

cell junction

Rac guanyl-nucleotide exchange factor activity

regulation of Rho protein signal transduction

regulation of cell proliferation

metal ion binding

Rac GTPase binding

cell division

Pathogenic Escherichia coli infection - EHEC

1556203_a_at 0.427 3.932 4.457 4.464e-04 0.103 0.161 SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 1 204582822, 204582822 AI263819 1q32.1 Hs.497575 7

GTPase activator activity

intracellular

signal transduction

Axon guidance

213279_at 0.559 5.807 4.446 4.569e-04 0.104 0.141 DHRS1 dehydrogenase/reductase (SDR family) member 1 14 -23829645, -23829645 AL050217 14q12 Hs.719146 13

binding

nucleus

cytoplasm

mitochondrial inner membrane

endoplasmic reticulum

Golgi apparatus

oxidoreductase activity

oxidation reduction

 
219233_s_at 0.334 5.366 4.444 4.581e-04 0.104 0.138 GSDMB gasdermin B 17 -35314373, -35314373 NM_018530 17q12 Hs.306777 12

cytoplasm

 
217878_s_at -0.901 7.117 -4.441 4.615e-04 0.104 0.132 CDC27 cell division cycle 27 homolog (S. cerevisiae) 17 -42550309 AI203880 17q12-q23.2 Hs.463295 53

protein binding

nucleus

nucleoplasm

cytoplasm

centrosome

cytosol

spindle microtubule

mitotic metaphase/anaphase transition

cell proliferation

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

220164_s_at 0.790 8.534 4.439 4.631e-04 0.104 0.129 FBXO40 F-box protein 40 3 122794859 NM_016298 3q13.33 Hs.272564 7

molecular_function

cellular_component

biological_process

zinc ion binding

modification-dependent protein catabolic process

metal ion binding

 
217977_at 0.854 9.379 4.437 4.647e-04 0.104 0.125 SEPX1 selenoprotein X, 1 16 -1928234 NM_016332 16p13.3 Hs.655346 11

protein-methionine-R-oxide reductase activity

cellular_component

nucleus

cytoplasm

peptide-methionine-(S)-S-oxide reductase activity

zinc ion binding

selenium binding

oxidoreductase activity

protein repair

metal ion binding

oxidation reduction

 
39549_at 0.622 4.601 4.437 4.647e-04 0.104 0.125 NPAS2 neuronal PAS domain protein 2 2 100803044 AI743090 2q11.2 Hs.156832 Hs.705895 23

transcription factor activity

signal transducer activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

signal transduction

central nervous system development

circadian sleep/wake cycle

locomotor rhythm

positive regulation of transcription from RNA polymerase II promoter

rhythmic process

Hsp90 protein binding

Circadian rhythm - mammal

208937_s_at -1.088 8.418 -4.434 4.681e-04 0.104 0.119 ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein 20 29656752 D13889 20q11 Hs.504609 112

negative regulation of transcription from RNA polymerase II promoter

protein binding

nucleus

nucleus

transforming growth factor beta receptor signaling pathway

multicellular organismal development

heart development

negative regulation of transcription by transcription factor localization

negative regulation of transcription

transcription repressor activity

BMP signaling pathway

negative regulation of transcription factor activity

blood vessel endothelial cell migration

regulation of angiogenesis

TGF-beta signaling pathway

219165_at 1.062 8.954 4.433 4.687e-04 0.104 0.118 PDLIM2 PDZ and LIM domain 2 (mystique) 8 22492587, 22493928, 22493928 NM_021630 8p21.2 Hs.632034 10

protein binding

nucleus

cytoplasm

cytoskeleton

zinc ion binding

cell surface

metal ion binding

 
1552734_at -0.356 3.951 -4.432 4.691e-04 0.104 0.117 RICTOR RPTOR independent companion of MTOR, complex 2 5 -38973779 NM_152756 5p13.1 Hs.407926 21

guanyl-nucleotide exchange factor activity

protein binding

intracellular

embryonic development

positive regulation of actin filament polymerization

actin cytoskeleton reorganization

TORC2 complex

positive regulation of TOR signaling pathway

regulation of Rac GTPase activity

regulation of actin cytoskeleton organization

positive regulation of peptidyl-tyrosine phosphorylation

regulation of small GTPase mediated signal transduction

regulation of protein kinase B signaling cascade

mTOR signaling pathway

226679_at 0.559 6.465 4.432 4.694e-04 0.104 0.116 SLC26A11 solute carrier family 26, member 11 17 75808831 BE964598 17q25.3 Hs.4866 4

transporter activity

endoplasmic reticulum

Golgi apparatus

plasma membrane

ion transport

secondary active sulfate transmembrane transporter activity

sulfate transport

anion transmembrane transporter activity

anion exchanger activity

integral to membrane

 
227865_at 0.515 5.673 4.429 4.724e-04 0.104 0.111 C9orf103 chromosome 9 open reading frame 103 9 85427785 BF111242 9q21-q22 Hs.530261 1

nucleotide binding

molecular_function

shikimate kinase activity

ATP binding

cellular_component

carbohydrate metabolic process

biological_process

transferase activity

gluconokinase activity

 
224435_at 0.667 8.214 4.425 4.767e-04 0.104 0.103 C10orf58 chromosome 10 open reading frame 58 10 82158221, 82163570 BC005871 10q23.1 Hs.500333 Hs.718589 10

extracellular region

 
218164_at 0.609 7.072 4.422 4.788e-04 0.104 0.099 SPATA20 spermatogenesis associated 20 17 45979560 NM_022827 17q21.33 Hs.103147 7

catalytic activity

protein binding

multicellular organismal development

spermatogenesis

cell differentiation

 
241459_at 0.788 7.082 4.422 4.790e-04 0.104 0.098 LIMCH1 LIM and calponin homology domains 1 4 41057560, 41309675 AI494113 4p13 Hs.335163 10

actin binding

zinc ion binding

actomyosin structure organization

metal ion binding

 
200759_x_at -0.539 11.280 -4.417 4.836e-04 0.104 0.090 NFE2L1 nuclear factor (erythroid-derived 2)-like 1 17 43480684 NM_003204 17q21.3 Hs.514284 20

transcription factor activity

transcription cofactor activity

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

heme biosynthetic process

inflammatory response

anatomical structure morphogenesis

sequence-specific DNA binding

protein dimerization activity

 
211729_x_at 0.435 8.716 4.416 4.850e-04 0.104 0.087 BLVRA biliverdin reductase A 7 43764796 BC005902 7p14-cen Hs.488143 17

biliverdin reductase activity

binding

cytoplasm

zinc ion binding

oxidoreductase activity

heme catabolic process

metal ion binding

oxidation reduction

Porphyrin and chlorophyll metabolism

232599_at 1.092 4.447 4.410 4.907e-04 0.104 0.077 EXOC6 exocyst complex component 6 10 94584449, 94598204 AF220217 10q23.33 Hs.655657 8

exocyst

vesicle docking during exocytosis

protein transport

 
206891_at -2.645 9.865 -4.410 4.911e-04 0.104 0.076 ACTN3 actinin, alpha 3 11 66070966 NM_001104 11q13.1 Hs.654432 47

actin binding

integrin binding

calcium ion binding

protein binding

actin filament

focal adhesion

structural constituent of muscle

pseudopodium

protein homodimerization activity

regulation of apoptosis

focal adhesion formation

Focal adhesion

Adherens junction

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Systemic lupus erythematosus

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

236574_at 0.340 5.748 4.401 5.001e-04 0.105 0.060 LOC284373 hypothetical protein LOC284373 19   AI304870 19q13.41 Hs.188680 1    
36829_at -0.802 7.455 -4.401 5.002e-04 0.105 0.060 PER1 period homolog 1 (Drosophila) 17 -7984512 AF022991 17p13.1-p12 Hs.445534 54

signal transducer activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

signal transduction

circadian rhythm

entrainment of circadian clock

negative regulation of transcription

Circadian rhythm - mammal

224752_at -0.335 9.383 -4.399 5.015e-04 0.105 0.057 PL-5283 PL-5283 protein 7 134997760 BG031051 7q33 Hs.200022 3    
235291_s_at 0.518 4.037 4.394 5.071e-04 0.106 0.047 FLJ32255 hypothetical protein LOC643977 5   BE875232 5p12 Hs.535791 1    
224476_s_at 0.530 7.217 4.389 5.118e-04 0.106 0.039 MESP1 mesoderm posterior 1 homolog (mouse) 15 -88094103 BC006219 15q26.1 Hs.447531 4

heart morphogenesis

DNA binding

nucleus

Notch signaling pathway

multicellular organismal development

mesodermal cell migration

transcription regulator activity

regulation of transcription

 
232024_at 1.092 5.023 4.389 5.121e-04 0.106 0.038 GIMAP2 GTPase, IMAP family member 2 7 150013726 AI431931 7q36.1 Hs.647071 5

nucleotide binding

GTP binding

membrane

integral to membrane

 
217741_s_at -1.023 8.246 -4.383 5.178e-04 0.107 0.028 ZFAND5 zinc finger, AN1-type domain 5 9 -74156160 AW471220 9q13-q21 Hs.406096 6

in utero embryonic development

vasculature development

respiratory system process

molecular_function

DNA binding

cellular_component

biological_process

zinc ion binding

fibroblast migration

metal ion binding

platelet-derived growth factor receptor signaling pathway

skeletal system morphogenesis

smooth muscle tissue development

face development

 
210652_s_at 0.870 4.608 4.376 5.255e-04 0.108 0.015 TTC39A tetratricopeptide repeat domain 39A 1 -51525518, -51525518 BC004399 1p32.3 Hs.112949 3

binding

cellular_component

biological_process

 
203207_s_at -0.662 5.109 -4.345 5.593e-04 0.113 -0.041 MTFR1 mitochondrial fission regulator 1 8 66719441, 66719441, 66744661 BF214329 8q13.1 Hs.584788 8

mitochondrion

plasma membrane

 
227054_at 0.391 7.055 4.344 5.611e-04 0.113 -0.043 N6AMT2 N-6 adenine-specific DNA methyltransferase 2 (putative) 13 -20201072 AI141584 13q12.11 Hs.26674 3

nucleic acid binding

methyltransferase activity

transferase activity

methylation

 
207076_s_at 1.411 7.831 4.343 5.617e-04 0.113 -0.044 ASS1 argininosuccinate synthetase 1 9 132309914 NM_000050 9q34.1 Hs.160786 40

urea cycle

nucleotide binding

argininosuccinate synthase activity

protein binding

ATP binding

cytoplasm

arginine biosynthetic process

cellular amino acid biosynthetic process

ligase activity

Alanine, aspartate and glutamate metabolism

Arginine and proline metabolism

Metabolic pathways

217975_at 0.623 7.011 4.339 5.662e-04 0.113 -0.052 WBP5 WW domain binding protein 5 X 102498035 NM_016303 Xq22.2 Hs.533287 6

protein binding

WW domain binding

 
1568900_a_at 0.458 3.053 4.337 5.684e-04 0.113 -0.055 ZNF568 zinc finger protein 568 19 42099073 BC031218 19q13.12 Hs.404220 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
203235_at 0.338 6.272 4.336 5.696e-04 0.113 -0.057 THOP1 thimet oligopeptidase 1 19 2736505 NM_003249 19q13.3 Hs.78769 24

metalloendopeptidase activity

protein binding

cytoplasm

proteolysis

peptide metabolic process

protein kinase cascade

peptidase activity

zinc ion binding

metal ion binding

Renin-angiotensin system

209829_at 1.232 7.000 4.333 5.733e-04 0.114 -0.063 FAM65B family with sequence similarity 65, member B 6 -24947573, -24912491 AB002384 6p22.3-p21.32 Hs.559459 7

binding

cytoplasm

mitochondrion

cytoskeleton

multicellular organismal development

muscle organ development

cell differentiation

filopodium

 
217655_at 0.381 3.262 4.330 5.765e-04 0.114 -0.068 LOC100127972 hypothetical LOC100127972 19   BE552409 19q13.12 Hs.710764 Hs.716895 1    
215286_s_at -0.486 4.704 -4.327 5.803e-04 0.114 -0.074 PHTF2 putative homeodomain transcription factor 2 7 77266044, 77266044, 77307382, 77307382 AL050389 7q11.23-q21 Hs.203965 Hs.601884 11

DNA binding

nucleus

endoplasmic reticulum

regulation of transcription

 
210445_at 0.373 4.524 4.312 5.986e-04 0.116 -0.102 FABP6 fatty acid binding protein 6, ileal 5 159546951, 159558625, 159589014 U19869 5q33.3-q34 Hs.519719 18

transporter activity

fatty acid binding

cytoplasm

cytosol

lipid metabolic process

transport

steroid metabolic process

negative regulation of cell proliferation

PPAR signaling pathway

236972_at -1.271 10.165 -4.306 6.053e-04 0.116 -0.112 TRIM63 tripartite motif-containing 63 1 -26250384 AI351421 1p34-p33 Hs.279709 20

ubiquitin-protein ligase activity

signal transducer activity

protein binding

intracellular

nucleus

cytoplasm

cytoplasm

microtubule

muscle contraction

signal transduction

zinc ion binding

ligase activity

modification-dependent protein catabolic process

titin binding

proteasomal ubiquitin-dependent protein catabolic process

contractile fiber

metal ion binding

 
202808_at -0.621 7.423 -4.306 6.054e-04 0.116 -0.112 C10orf26 chromosome 10 open reading frame 26 10 104493716, 104525877 AK000161 10q24.32 Hs.500897 Hs.693257 Hs.707763 9

membrane

integral to membrane

 
205903_s_at -0.485 4.868 -4.303 6.098e-04 0.116 -0.118 KCNN3 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 1 -152946536, -152946536 NM_002249 1q21.3 Hs.490765 40

ion channel activity

calmodulin binding

ion transport

potassium ion transport

membrane

integral to membrane

small conductance calcium-activated potassium channel activity

 
238844_s_at -0.809 5.808 -4.299 6.142e-04 0.117 -0.125 NPHP1 nephronophthisis 1 (juvenile) 2 -110238202 BF216535 2q13 Hs.280388 36

structural molecule activity

protein binding

adherens junction

signal transduction

excretion

visual behavior

membrane

cell-cell adhesion

actin cytoskeleton organization

cell junction

 
215175_at 0.530 5.740 4.296 6.185e-04 0.117 -0.131 PCNX pecanex homolog (Drosophila) 14 70443874 AB023212 14q24.2 Hs.446559 10

membrane

integral to membrane

 
225329_at 0.350 6.748 4.292 6.231e-04 0.117 -0.138 LOC348262 hypothetical protein LOC348262 17 -2338651 BF338291 17q25.3 Hs.514632 1    
208754_s_at -0.694 7.540 -4.285 6.324e-04 0.118 -0.151 NAP1L1 nucleosome assembly protein 1-like 1 12 -74724938 AL162068 12q21.2 Hs.524599 Hs.695185 17

protein binding

nucleus

chromatin assembly complex

DNA replication

nucleosome assembly

positive regulation of cell proliferation

melanosome

 
202891_at 0.437 7.566 4.276 6.434e-04 0.120 -0.166 NIT1 nitrilase 1 1 159354514 NM_005600 1q21-q22 Hs.517342 7

nitrilase activity

nitrogen compound metabolic process

biological_process

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds

 
205898_at 0.940 6.220 4.272 6.491e-04 0.120 -0.174 CX3CR1 chemokine (C-X3-C motif) receptor 1 3 -39279988 U20350 3p21 3p21.3 Hs.78913 123

receptor activity

G-protein coupled receptor activity

chemokine receptor activity

protein binding

plasma membrane

integral to plasma membrane

chemotaxis

cellular defense response

cell adhesion

signal transduction

G-protein coupled receptor protein signaling pathway

response to wounding

interspecies interaction between organisms

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

203711_s_at -0.514 7.456 -4.271 6.509e-04 0.120 -0.177 HIBCH 3-hydroxyisobutyryl-Coenzyme A hydrolase 2 -190777604 NM_014362 2q32.2 Hs.656685 8

3-hydroxyisobutyryl-CoA hydrolase activity

protein binding

mitochondrion

metabolic process

branched chain family amino acid catabolic process

hydrolase activity

Valine, leucine and isoleucine degradation

beta-Alanine metabolism

Propanoate metabolism

Metabolic pathways

238444_at 0.481 4.787 4.270 6.511e-04 0.120 -0.177 ZNF618 zinc finger protein 618 9 115678382 AV704303 9q32 Hs.349208 2

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

protein dimerization activity

 
219926_at -0.555 10.266 -4.269 6.528e-04 0.120 -0.179 POPDC3 popeye domain containing 3 6 -105712475, -105712475 NM_022361 6q21 Hs.458336 7

molecular_function

biological_process

membrane

integral to membrane

 
229178_at 0.458 4.428 4.267 6.557e-04 0.120 -0.183 PRTG protogenin homolog (Gallus gallus) 15 -53691041 AV699825 15q21.3 Hs.130957 4

multicellular organismal development

membrane

integral to membrane

 
213229_at 0.614 7.505 4.266 6.570e-04 0.120 -0.185 DICER1 dicer 1, ribonuclease type III 14 -94622317, -94622317 BF590131 14q32.13 Hs.87889 63

nucleotide binding

magnesium ion binding

angiogenesis

double-stranded RNA binding

helicase activity

endonuclease activity

ribonuclease III activity

protein binding

ATP binding

intracellular

cytoplasm

RNA processing

ATP-dependent helicase activity

RNA-induced silencing complex

hydrolase activity

stem cell maintenance

manganese ion binding

lung development

RNA interference, production of siRNA

RNA interference, targeting of mRNA for destruction

gene silencing by RNA

pre-microRNA processing

embryonic hindlimb morphogenesis

branching morphogenesis of a tube

 
214643_x_at -0.538 9.148 -4.259 6.661e-04 0.121 -0.198 BIN1 bridging integrator 1 2 -127522077, -127522076 BG034080 2q14 Hs.193163 69

protein binding

nucleus

cytoplasm

multicellular organismal development

cell proliferation

actin cytoskeleton

regulation of endocytosis

cell differentiation

interspecies interaction between organisms

 
227923_at 0.598 7.008 4.258 6.675e-04 0.121 -0.199 SHANK3 SH3 and multiple ankyrin repeat domains 3 22 49459935 BF439330 22q13.3 Hs.149035 21

MAPKKK cascade

embryonic epithelial tube formation

protein binding

cytoplasm

plasma membrane

postsynaptic density

SH3 domain binding

cell junction

synapse

postsynaptic membrane

 
203068_at -0.684 7.532 -4.253 6.744e-04 0.121 -0.209 KLHL21 kelch-like 21 (Drosophila) 1 -6573370 NM_014851 1p36.31 Hs.7764 5

protein binding

modification-dependent protein catabolic process

 
203575_at -0.432 7.110 -4.252 6.758e-04 0.121 -0.210 CSNK2A2 casein kinase 2, alpha prime polypeptide 16 -56749312 NM_001896 16q21 Hs.82201 143

nucleotide binding

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

Wnt receptor signaling pathway

transferase activity

protein N-terminus binding

regulation of cell cycle

Wnt signaling pathway

Adherens junction

Tight junction

218176_at 0.365 6.626 4.250 6.792e-04 0.121 -0.215 MAGEF1 melanoma antigen family F, 1 3 -185910848 NM_022149 3q13 Hs.306123 4    
1405_i_at 0.629 3.772 4.249 6.795e-04 0.121 -0.215 CCL5 chemokine (C-C motif) ligand 5 17 -31222608 M21121 17q11.2-q12 Hs.514821 312

signal transducer activity

extracellular region

extracellular space

cytoplasm

cellular calcium ion homeostasis

exocytosis

cell motion

chemotaxis

inflammatory response

immune response

cellular defense response

response to oxidative stress

cell adhesion

signal transduction

cell-cell signaling

chemokine activity

response to virus

response to tumor necrosis factor

chemoattractant activity

negative regulation of viral genome replication

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

Toll-like receptor signaling pathway

Prion diseases

Epithelial cell signaling in Helicobacter pylori infection

223852_s_at -0.555 7.293 -4.246 6.846e-04 0.122 -0.222 STK40 serine/threonine kinase 40 1 -36577811 BC005169 1p34.3 Hs.471768 11

nucleotide binding

protein serine/threonine kinase activity

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

transferase activity

 
230329_s_at 0.650 7.493 4.235 6.992e-04 0.124 -0.241 NUDT6 nudix (nucleoside diphosphate linked moiety X)-type motif 6 4 -124033248, -124033248 AI580268 4q26 Hs.558459 15

cellular_component

growth factor activity

biological_process

hydrolase activity

 
219629_at 0.522 5.097 4.233 7.023e-04 0.124 -0.245 FAM118A family with sequence similarity 118, member A 22 44083744, 44084448 NM_017911 22q13 Hs.265018 6

membrane

integral to membrane

 
226879_at 0.349 6.393 4.231 7.051e-04 0.124 -0.249 HVCN1 hydrogen voltage-gated channel 1 12 -109570873, -109570873 AW406569 12q24.11 Hs.211511 Hs.334637 11

voltage-gated ion channel activity

ion transport

response to pH

response to zinc ion

response to zinc ion

proton transport

membrane

integral to membrane

voltage-gated proton channel activity

voltage-gated proton channel activity

 
242794_at 0.596 3.715 4.229 7.081e-04 0.124 -0.252 MAML3 mastermind-like 3 (Drosophila) 4 -140856995 AI569476 4q28 Hs.586165 7

transcription coactivator activity

nucleus

Notch signaling pathway

nuclear speck

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

Notch signaling pathway

204447_at 0.431 6.198 4.217 7.250e-04 0.126 -0.274 ProSAPiP1 ProSAPiP1 protein 20 -3091272 NM_014731 20p13 Hs.90232 4

structural molecule activity

cytoplasm

membrane

 
209029_at -0.452 7.786 -4.211 7.351e-04 0.127 -0.286 COPS7A COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis) 12 6703410, 6703440, 6703505, 6703709 AF193844 12p13.31 Hs.530823 16

nucleus

cytoplasm

signalosome

 
1559965_at -0.597 5.394 -4.202 7.477e-04 0.129 -0.301 LOC100192378 hypothetical LOC100192378 8 -77685669 BC037827 8q21.11 Hs.648649 2    
228608_at 0.664 3.211 4.193 7.617e-04 0.130 -0.318 NALCN sodium leak channel, non-selective 13 -100504130 N49852 13q32.3 Hs.525146 8

voltage-gated ion channel activity

sodium channel activity

ion transport

sodium ion transport

membrane

integral to membrane

sodium ion binding

 
213462_at 0.545 5.750 4.190 7.663e-04 0.130 -0.323 NPAS2 neuronal PAS domain protein 2 2 100803044 AW000928 2q11.2 Hs.156832 Hs.705895 23

transcription factor activity

signal transducer activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

signal transduction

central nervous system development

circadian sleep/wake cycle

locomotor rhythm

positive regulation of transcription from RNA polymerase II promoter

rhythmic process

Hsp90 protein binding

Circadian rhythm - mammal

210202_s_at -0.698 10.258 -4.186 7.723e-04 0.130 -0.330 BIN1 bridging integrator 1 2 -127522077, -127522076 U87558 2q14 Hs.193163 69

protein binding

nucleus

cytoplasm

multicellular organismal development

cell proliferation

actin cytoskeleton

regulation of endocytosis

cell differentiation

interspecies interaction between organisms

 
207551_s_at -0.483 7.380 -4.186 7.731e-04 0.130 -0.331 MSL3 male-specific lethal 3 homolog (Drosophila) X 11686198, 11686198, 11687681 NM_006800 Xp22.3 Hs.655288 6

chromatin

chromatin binding

transcription factor activity

nucleus

chromatin assembly or disassembly

transcription from RNA polymerase II promoter

multicellular organismal development

chromatin modification

regulation of transcription

 
224950_at 0.536 5.209 4.183 7.779e-04 0.131 -0.337 PTGFRN prostaglandin F2 receptor negative regulator 1 117254211 BF476250 1p13.1 Hs.418093 14

protein binding

endoplasmic reticulum

Golgi apparatus

membrane

integral to membrane

 
213166_x_at 0.652 8.455 4.179 7.843e-04 0.131 -0.344 FAM128A family with sequence similarity 128, member A 2 -131958002 BG332462 2q21.1 Hs.655067 2    
201381_x_at -0.335 9.087 -4.179 7.844e-04 0.131 -0.344 CACYBP calcyclin binding protein 1 173235193, 173235514 AF057356 1q24-q25 Hs.508524 15

protein binding

nucleus

cytoplasm

modification-dependent protein catabolic process

Wnt signaling pathway

212995_x_at 0.561 8.794 4.178 7.856e-04 0.131 -0.346 FAM128B family with sequence similarity 128, member B 2 130656172 BG255188 2q21.1 Hs.469925 Hs.516450 2    
210691_s_at -0.468 8.089 -4.178 7.858e-04 0.131 -0.346 CACYBP calcyclin binding protein 1 173235193, 173235514 AF275803 1q24-q25 Hs.508524 15

protein binding

nucleus

cytoplasm

modification-dependent protein catabolic process

Wnt signaling pathway

202682_s_at 0.318 7.849 4.176 7.894e-04 0.131 -0.350 USP4 ubiquitin specific peptidase 4 (proto-oncogene) 3 -49289580 NM_003363 3p21.3 Hs.403828 Hs.714416 Hs.77500 17

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

protein binding

nucleus

cytoplasm

lysosome

ubiquitin-dependent protein catabolic process

peptidase activity

 
218891_at -0.387 7.142 -4.172 7.946e-04 0.131 -0.356 C10orf76 chromosome 10 open reading frame 76 10 -103595345 NM_024541 10q24.32 Hs.16004 4

membrane

integral to membrane

 
214295_at 0.433 4.094 4.172 7.960e-04 0.131 -0.357 KIAA0485 hypothetical LOC57235     AW129056   Hs.604754 1    
204135_at -0.796 8.536 -4.165 8.075e-04 0.132 -0.370 FILIP1L filamin A interacting protein 1-like 3 -101049461, -101049461, -101034677 NM_014890 3q12.1 Hs.104672 8

molecular_function

nucleus

cytoplasm

biological_process

membrane

myosin complex

 
204655_at 0.600 4.472 4.161 8.127e-04 0.132 -0.376 CCL5 chemokine (C-C motif) ligand 5 17 -31222608 NM_002985 17q11.2-q12 Hs.514821 312

signal transducer activity

extracellular region

extracellular space

cytoplasm

cellular calcium ion homeostasis

exocytosis

cell motion

chemotaxis

inflammatory response

immune response

cellular defense response

response to oxidative stress

cell adhesion

signal transduction

cell-cell signaling

chemokine activity

response to virus

response to tumor necrosis factor

chemoattractant activity

negative regulation of viral genome replication

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

Toll-like receptor signaling pathway

Prion diseases

Epithelial cell signaling in Helicobacter pylori infection

219584_at 1.617 5.503 4.161 8.139e-04 0.132 -0.377 PLA1A phospholipase A1 member A 3 120799411 NM_015900 3q13.13-q13.2 Hs.437451 11

extracellular region

phosphatidylserine metabolic process

phospholipase A1 activity

lipid catabolic process

hydrolase activity

Tropane, piperidine and pyridine alkaloid biosynthesis

242979_at 0.951 5.326 4.159 8.167e-04 0.133 -0.381 IRS1 insulin receptor substrate 1 2 -227304276 AI474666 2q36 Hs.471508 290

positive regulation of mesenchymal cell proliferation

signal transducer activity

transmembrane receptor protein tyrosine kinase docking protein activity

protein kinase C binding

insulin receptor binding

insulin-like growth factor receptor binding

protein binding

nucleus

cytoplasm

microsome

plasma membrane

insulin receptor complex

caveola

signal transduction

positive regulation of glucose metabolic process

phosphoinositide 3-kinase cascade

positive regulation of cell migration

mammary gland development

positive regulation of fatty acid beta-oxidation

SH2 domain binding

glucose homeostasis

response to peptide hormone stimulus

protein kinase B signaling cascade

phosphoinositide 3-kinase binding

phosphoinositide 3-kinase binding

positive regulation of phosphoinositide 3-kinase activity

positive regulation of glycogen biosynthetic process

positive regulation of glycogen biosynthetic process

positive regulation of glucose import

negative regulation of insulin receptor signaling pathway

positive regulation of insulin receptor signaling pathway

insulin-like growth factor receptor signaling pathway

Neurotrophin signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

Type II diabetes mellitus

204143_s_at -1.149 6.074 -4.155 8.229e-04 0.133 -0.387 ENOSF1 enolase superfamily member 1 18 -663860, -663860, -662543 NM_017512 18p11.32 Hs.369762 Hs.658550 12

magnesium ion binding

cellular_component

mitochondrion

metabolic process

cellular amino acid catabolic process

isomerase activity

 
202003_s_at 0.700 10.017 4.151 8.301e-04 0.134 -0.395 ACAA2 acetyl-Coenzyme A acyltransferase 2 18 -45563871 NM_006111 18q21.1 Hs.200136 10

acetyl-CoA C-acyltransferase activity

mitochondrion

mitochondrial inner membrane

lipid metabolic process

fatty acid metabolic process

cholesterol biosynthetic process

metabolic process

acyltransferase activity

transferase activity

Fatty acid elongation in mitochondria

Fatty acid metabolism

Valine, leucine and isoleucine degradation

Metabolic pathways

1569852_at -1.245 7.982 -4.151 8.303e-04 0.134 -0.395 C7orf53 chromosome 7 open reading frame 53 7 111908143, 111908301 BC031976 7q31.1 Hs.396189 5

membrane

integral to membrane

 
229623_at 0.417 6.597 4.149 8.337e-04 0.134 -0.399 FLJ12993 hypothetical LOC441027 4 -83624627 BF508344 4q21.22 Hs.507676 1    
202376_at 1.120 5.401 4.143 8.440e-04 0.134 -0.410 SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 14 94148466 NM_001085 14q32.1 Hs.534293 Hs.710488 134

DNA binding

serine-type endopeptidase inhibitor activity

protein binding

extracellular region

intracellular

nucleus

acute-phase response

inflammatory response

regulation of lipid metabolic process

peptidase inhibitor activity

 
224367_at 2.819 6.783 4.141 8.471e-04 0.134 -0.413 BEX2 brain expressed X-linked 2 X -102450929 AF251053 Xq22 Hs.398989 11

nucleus

cytoplasm

 
200999_s_at 0.647 7.516 4.141 8.475e-04 0.134 -0.414 CKAP4 cytoskeleton-associated protein 4 12 -105155789 NM_006825 12q23.3 Hs.714862 Hs.74368 22

membrane fraction

endoplasmic reticulum

membrane

integral to membrane

 
207717_s_at 0.981 4.432 4.139 8.505e-04 0.134 -0.417 PKP2 plakophilin 2 12 -32834946 NM_004572 12p11 Hs.164384 29

protein binding

nucleus

cytoskeleton

plasma membrane

integral to membrane

cell-cell adhesion

desmosome

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

206799_at 1.544 5.452 4.138 8.520e-04 0.134 -0.419 SCGB1D2 secretoglobin, family 1D, member 2 11 61766299 NM_006551 11q13 Hs.204096 9

binding

extracellular region

extracellular space

 
60471_at 0.431 5.612 4.135 8.572e-04 0.134 -0.424 RIN3 Ras and Rab interactor 3 14 92049877 AA625133 14q32.12 Hs.326822 8

GTPase activator activity

protein binding

cellular_component

cytoplasm

early endosome

endocytosis

signal transduction

Ras GTPase binding

cytoplasmic vesicle

 
239084_at -0.430 4.907 -4.135 8.584e-04 0.134 -0.425 SNAP29 synaptosomal-associated protein, 29kDa 22 19543291 BE896490 22q11.21 Hs.108002 Hs.701035 19

SNAP receptor activity

cytoplasm

plasma membrane

exocytosis

vesicle targeting

membrane fusion

protein transport

synaptosome

cell junction

synapse

SNARE interactions in vesicular transport

215293_s_at 0.287 6.207 4.130 8.670e-04 0.135 -0.434 PGAP2 post-GPI attachment to proteins 2 11 3775529, 3775624, 3775707, 3775765, 3785815, 3786341 AL049261 11p15.5 Hs.133968 5

Golgi membrane

endoplasmic reticulum

endoplasmic reticulum membrane

Golgi apparatus

GPI anchor biosynthetic process

protein transporter activity

membrane

integral to membrane

 
205011_at 0.467 6.303 4.128 8.703e-04 0.135 -0.438 VWA5A von Willebrand factor A domain containing 5A 11 123491320, 123491320 NM_014622 11q23 Hs.152944 5    
230435_at 0.584 6.759 4.113 8.967e-04 0.138 -0.465 LOC375190 hypothetical protein LOC375190 2 24199853 BF108666 2p23.3 Hs.710370 4    
238792_at 0.466 5.515 4.108 9.054e-04 0.138 -0.473 PCNX pecanex homolog (Drosophila) 14 70443874 BF209668 14q24.2 Hs.446559 10

membrane

integral to membrane

 
210045_at -0.529 8.326 -4.108 9.064e-04 0.138 -0.474 IDH2 isocitrate dehydrogenase 2 (NADP+), mitochondrial 15 -88428215 AU151428 15q26.1 Hs.596461 20

magnesium ion binding

isocitrate dehydrogenase (NADP+) activity

mitochondrion

carbohydrate metabolic process

glyoxylate cycle

tricarboxylic acid cycle

isocitrate metabolic process

oxidoreductase activity

oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

manganese ion binding

NAD or NADH binding

oxidation reduction

Citrate cycle (TCA cycle)

Glutathione metabolism

Reductive carboxylate cycle (CO2 fixation)

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

219161_s_at 0.419 5.826 4.107 9.087e-04 0.138 -0.477 CKLF chemokine-like factor 16 65143966, 65143972 NM_016951 16q21 Hs.15159 Hs.710181 12

extracellular region

extracellular space

chemotaxis

chemokine activity

cell proliferation

membrane

integral to membrane

neutrophil chemotaxis

secretion by cell

macrophage chemotaxis

lymphocyte chemotaxis

 
1554678_s_at -0.436 8.367 -4.105 9.125e-04 0.138 -0.480 HNRPDL heterogeneous nuclear ribonucleoprotein D-like 4 -83563370 AB066484 4q13-q21 Hs.527105 14

nucleotide binding

DNA binding

double-stranded DNA binding

single-stranded DNA binding

RNA binding

protein binding

nucleus

cytoplasm

RNA processing

poly(A) RNA binding

heterogeneous nuclear ribonucleoprotein complex

regulation of transcription

 
231940_at 0.614 6.712 4.103 9.150e-04 0.138 -0.483 ZNF529 zinc finger protein 529 19 -41762996, -41726357, -41726357 AI369933 19q13.13 Hs.708146 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
226982_at -0.759 5.535 -4.102 9.169e-04 0.138 -0.485 ELL2 elongation factor, RNA polymerase II, 2 5 -95246557 AI745624 5q15 Hs.192221 Hs.708710 6

RNA polymerase II transcription factor activity

nucleus

RNA elongation from RNA polymerase II promoter

transcription elongation factor complex

RNA polymerase II transcription elongation factor activity

regulation of transcription

 
228099_at 0.586 6.394 4.099 9.231e-04 0.139 -0.491 ZNF550 zinc finger protein 550 19 -62750154 AI805301 19q13.43 Hs.180257 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
231956_at 0.647 4.951 4.098 9.246e-04 0.139 -0.492 KIAA1618 KIAA1618 17 75849261 AA976354 17q25.3 Hs.514554 5    
1557283_a_at 0.612 3.670 4.098 9.257e-04 0.139 -0.493 ZNF519 zinc finger protein 519 18 -14094723 BC037787 18p11.21 Hs.352635 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
210140_at 0.399 5.489 4.093 9.342e-04 0.139 -0.501 CST7 cystatin F (leukocystatin) 20 24877865 AF031824 20p11.21 Hs.143212 17

cysteine-type endopeptidase inhibitor activity

extracellular region

cytoplasm

immune response

 
206030_at 0.632 8.060 4.092 9.356e-04 0.139 -0.503 ASPA aspartoacylase (Canavan disease) 17 3324153, 3326045 NM_000049 17pter-p13 Hs.171142 27

aminoacylase activity

nucleus

cytoplasm

aspartate catabolic process

metabolic process

zinc ion binding

hydrolase activity, acting on ester bonds

aspartoacylase activity

metal ion binding

Alanine, aspartate and glutamate metabolism

Histidine metabolism

228652_at 0.576 7.520 4.085 9.491e-04 0.140 -0.516 ZNF776 zinc finger protein 776 19 62949975 AI279532 19q13.43 Hs.109540 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
220117_at -0.351 4.670 -4.084 9.526e-04 0.140 -0.519 ZNF385D zinc finger protein 385D 3 -21437495 NM_024697 3p24.3 Hs.21026 3

nucleic acid binding

intracellular

nucleus

zinc ion binding

metal ion binding

 
218729_at 0.697 6.757 4.080 9.593e-04 0.141 -0.525 LXN latexin 3 -159866896 NM_020169 3q25.32 Hs.478067 5

enzyme inhibitor activity

protein binding

cytoplasm

metalloendopeptidase inhibitor activity

detection of temperature stimulus involved in sensory perception of pain

 
224630_at -0.369 7.942 -4.074 9.717e-04 0.142 -0.537 ERLEC1 endoplasmic reticulum lectin 1 2 53867571 AK001913 2p16.2 Hs.438336 Hs.713845 10

protein binding

endoplasmic reticulum

endoplasmic reticulum lumen

 
1565759_at -0.417 5.615 -4.070 9.793e-04 0.143 -0.544 RPL13 ribosomal protein L13 16 88154590, 88154631 BG396520 16q24.3 17p11.2 Hs.410817 17

RNA binding

structural constituent of ribosome

protein binding

intracellular

cytosol

translational elongation

cytosolic ribosome

Ribosome

209397_at 0.657 8.992 4.067 9.861e-04 0.143 -0.550 ME2 malic enzyme 2, NAD(+)-dependent, mitochondrial 18 46659432 BC000147 18q21 6p25-p24 Hs.233119 24

malate dehydrogenase (decarboxylating) activity

binding

mitochondrion

mitochondrial matrix

malate metabolic process

electron carrier activity

oxidoreductase activity

malate dehydrogenase (oxaloacetate-decarboxylating) activity

metal ion binding

NAD or NADH binding

oxidation reduction

Pyruvate metabolism

Biosynthesis of phenylpropanoids

Biosynthesis of alkaloids derived from terpenoid and polyketide

208624_s_at -0.662 6.994 -4.064 9.905e-04 0.143 -0.554 EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 3 185515049, 185515664, 185520956 BE966878 3q27-qter Hs.433750 91

RNA binding

translation initiation factor activity

protein binding

cytoplasm

cytosol

regulation of translational initiation

RNA metabolic process

eukaryotic translation initiation factor 4F complex

interspecies interaction between organisms

 
204067_at 0.403 7.561 4.061 9.972e-04 0.144 -0.560 SUOX sulfite oxidase 12 54677309 AA129776 12q13.2 Hs.558403 23

mitochondrion

mitochondrial intermembrane space

cytosol

response to nutrient

sulfite oxidase activity

electron carrier activity

oxidoreductase activity

heme binding

molybdenum ion binding

molybdopterin cofactor binding

metal ion binding

oxidation reduction

Sulfur metabolism

213394_at 0.467 6.371 4.060 1.000e-03 0.144 -0.563 MAPKBP1 mitogen-activated protein kinase binding protein 1 15 39853923 AI674759 15q15.1 Hs.513661 6    
219449_s_at -1.025 10.923 -4.060 1.000e-03 0.144 -0.563 TMEM70 transmembrane protein 70 8 75050983 NM_017866 8q21.11 Hs.106650 7

molecular_function

mitochondrion

membrane

integral to membrane

integral to mitochondrial membrane

mitochondrial proton-transporting ATP synthase complex assembly

 
205934_at -0.884 6.897 -4.053 1.015e-03 0.145 -0.576 PLCL1 phospholipase C-like 1 2 198377670, 198377777 NM_006226 2q33 Hs.153322 Hs.593586 8

phosphoinositide phospholipase C activity

signal transducer activity

calcium ion binding

cytoplasm

lipid metabolic process

intracellular signaling cascade

 
220116_at -0.776 6.122 -4.050 1.021e-03 0.145 -0.581 KCNN2 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 5 113725914, 113797125 NM_021614 5q22.3 Hs.98280 15

ion channel activity

calmodulin binding

ion transport

potassium ion transport

membrane

integral to membrane

small conductance calcium-activated potassium channel activity

 
217028_at 0.564 3.911 4.049 1.022e-03 0.145 -0.582 CXCR4 chemokine (C-X-C motif) receptor 4 2 -136588388, -136588388 AJ224869 2q21 Hs.593413 604

activation of MAPK activity

response to hypoxia

actin binding

G-protein coupled receptor activity

protein binding

cytoplasm

plasma membrane

integral to plasma membrane

apoptosis

chemotaxis

inflammatory response

immune response

signal transduction

G-protein coupled receptor protein signaling pathway

elevation of cytosolic calcium ion concentration

response to virus

coreceptor activity

C-C chemokine receptor activity

C-X-C chemokine receptor activity

initiation of viral infection

cell leading edge

myosin light chain binding

interspecies interaction between organisms

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

Endocytosis

Axon guidance

Leukocyte transendothelial migration

227321_at -0.873 7.016 -4.049 1.023e-03 0.145 -0.583 GATS GATS, stromal antigen 3 opposite strand 7 -99644496, -99636215 D52585 7q22.1 Hs.556063 Hs.718406 4    
220380_at 0.293 4.012 4.048 1.024e-03 0.145 -0.584 DNASE2B deoxyribonuclease II beta 1 84636802, 84646621 NM_021233 1p22.3 Hs.129142 5

endodeoxyribonuclease activity

deoxyribonuclease II activity

extracellular region

cytoplasm

lysosome

DNA metabolic process

hydrolase activity

Lysosome

225806_at 0.659 3.152 4.043 1.034e-03 0.146 -0.593 JUB jub, ajuba homolog (Xenopus laevis) 14 -22510249, -22510249 AI289311 14q11.2 Hs.655832 16

protein binding

nucleus

cytoplasm

centrosome

cytoskeleton

plasma membrane

focal adhesion

cell cycle

cell adhesion

zinc ion binding

lamellipodium

lamellipodium assembly

cell junction

regulation of cell migration

wound healing, spreading of epidermal cells

regulation of GTPase activity

metal ion binding

focal adhesion formation

 
1556554_at 0.389 5.834 4.043 1.034e-03 0.146 -0.593 TRIM50 tripartite motif-containing 50 7 -72364470 AK057366 7q11.23 Hs.647053 4

protein binding

intracellular

cytoplasm

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
1558700_s_at 0.774 4.153 4.039 1.043e-03 0.147 -0.600 ZNF260 zinc finger protein 260 19 -41693433 BC042676 19q13.12 Hs.18103 5

DNA binding

intracellular

nucleus

multicellular organismal development

zinc ion binding

regulation of transcription

metal ion binding

 
202861_at -1.089 7.351 -4.025 1.075e-03 0.150 -0.628 PER1 period homolog 1 (Drosophila) 17 -7984512 NM_002616 17p13.1-p12 Hs.445534 54

signal transducer activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

signal transduction

circadian rhythm

entrainment of circadian clock

negative regulation of transcription

Circadian rhythm - mammal

209020_at -0.511 7.971 -4.023 1.079e-03 0.150 -0.631 C20orf111 chromosome 20 open reading frame 111 20 -42258549 AF217514 20q13.11 Hs.75798 6    
235261_at -0.539 10.438 -4.022 1.080e-03 0.150 -0.632 UNC45B unc-45 homolog B (C. elegans) 17 30498948 AI800785 17q12 Hs.379636 4

binding

multicellular organismal development

muscle organ development

cell differentiation

 
229377_at -0.511 5.872 -4.021 1.083e-03 0.150 -0.635 GRTP1 growth hormone regulated TBC protein 1 13 -113026505 BF001483 13q34 Hs.170904 3

GTPase activator activity

Rab GTPase activator activity

intracellular

regulation of Rab GTPase activity

 
208913_at -0.579 7.188 -4.018 1.090e-03 0.151 -0.640 GGA2 golgi associated, gamma adaptin ear containing, ARF binding protein 2 16 -23383143 AA868560 16p12 Hs.460336 37

protein binding

intracellular

endosome

trans-Golgi network

intracellular protein transport

membrane

vesicle-mediated transport

membrane coat

clathrin adaptor complex

ADP-ribosylation factor binding

Lysosome

201376_s_at -0.405 6.523 -4.017 1.092e-03 0.151 -0.642 HNRNPF heterogeneous nuclear ribonucleoprotein F 10 -43201070, -43201070, -43201070, -43201070, -43201070, -43201070 AI591354 10q11.21-q11.22 Hs.712955 Hs.808 30

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

nucleoplasm

spliceosomal complex

nucleolus

cytoplasm

heterogeneous nuclear ribonucleoprotein complex

regulation of RNA splicing

 
230040_at 0.853 3.671 4.014 1.097e-03 0.151 -0.646 ADAMTS18 ADAM metallopeptidase with thrombospondin type 1 motif, 18 16 -75873525 AI733120 16q23 Hs.188746 9

metalloendopeptidase activity

extracellular region

proteinaceous extracellular matrix

proteolysis

peptidase activity

zinc ion binding

metal ion binding

 
221058_s_at 0.403 5.747 4.013 1.100e-03 0.151 -0.649 CKLF chemokine-like factor 16 65143966, 65143972 NM_016326 16q21 Hs.15159 Hs.710181 12

extracellular region

extracellular space

chemotaxis

chemokine activity

cell proliferation

membrane

integral to membrane

neutrophil chemotaxis

secretion by cell

macrophage chemotaxis

lymphocyte chemotaxis

 
1559496_at 0.730 4.982 4.013 1.102e-03 0.151 -0.650 PPA2 pyrophosphatase (inorganic) 2 4 -106509682 AL833123 4q25 Hs.654957 13

magnesium ion binding

inorganic diphosphatase activity

cytoplasm

mitochondrion

phosphate metabolic process

hydrolase activity

Oxidative phosphorylation

221567_at -0.356 8.126 -4.011 1.105e-03 0.151 -0.652 NOL3 nucleolar protein 3 (apoptosis repressor with CARD domain) 16 65765370 AF064599 16q21-q23 Hs.513667 22

RNA binding

intracellular

nucleus

nucleolus

cytoplasm

cytosol

mRNA processing

anti-apoptosis

RNA splicing

identical protein binding

regulation of apoptosis

 
243439_at 0.551 5.722 4.005 1.118e-03 0.152 -0.663 ZNF418 zinc finger protein 418 19 -63125063 AI971569 19q13.43 Hs.660728 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
226229_s_at 0.405 5.867 4.003 1.123e-03 0.153 -0.667 SSU72 SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) 1 -1466915 BF510732 1p36.33 Hs.30026 Hs.657061 7

phosphoprotein phosphatase activity

nucleus

cytoplasm

mRNA processing

hydrolase activity

 
205771_s_at -1.024 7.942 -3.998 1.134e-03 0.154 -0.676 AKAP7 A kinase (PRKA) anchor protein 7 6 131508153, 131613196 AL137063 6q23 Hs.486483 9

catalytic activity

intracellular

cytoplasm

cytosol

plasma membrane

ion transport

intracellular signaling cascade

protein localization

biological_process

RNA metabolic process

apical plasma membrane

lateral plasma membrane

protein kinase A binding

protein kinase A binding

 
203367_at 0.363 6.604 3.993 1.146e-03 0.155 -0.686 DUSP14 dual specificity phosphatase 14 17 32924063 NM_007026 17q12 Hs.91448 5

protein tyrosine phosphatase activity

protein amino acid dephosphorylation

hydrolase activity

MAP kinase tyrosine/serine/threonine phosphatase activity

MAPK signaling pathway

218676_s_at -0.452 6.714 -3.991 1.152e-03 0.155 -0.690 PCTP phosphatidylcholine transfer protein 17 51183354 NM_021213 17q21-q24 Hs.285218 9

cytoplasm

cytosol

cytosol

lipid binding

phosphatidylcholine transmembrane transporter activity

phosphatidylcholine transmembrane transporter activity

phospholipid transport

phosphatidylcholine binding

 
225381_at 0.788 5.988 3.988 1.159e-03 0.156 -0.695 LOC399959 hypothetical LOC399959 11 -121465022 AW162210 11q24.1 Hs.44098 2    
214179_s_at -0.536 10.811 -3.985 1.165e-03 0.156 -0.700 NFE2L1 nuclear factor (erythroid-derived 2)-like 1 17 43480684 H93013 17q21.3 Hs.514284 20

transcription factor activity

transcription cofactor activity

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

heme biosynthetic process

inflammatory response

anatomical structure morphogenesis

sequence-specific DNA binding

protein dimerization activity

 
219963_at -0.501 10.097 -3.978 1.181e-03 0.158 -0.713 DUSP13 dual specificity phosphatase 13 10 -76524197, -76524195 NM_016364 10q22.2 Hs.178170 9

protein tyrosine phosphatase activity

protein amino acid dephosphorylation

meiosis

spermatogenesis

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

 
225071_at -0.498 6.013 -3.976 1.188e-03 0.158 -0.717 NUS1 nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) 6 118103309 BG168247 6q22.1 Hs.289008 6

angiogenesis

molecular_function

receptor activity

cellular_component

multicellular organismal development

biological_process

membrane

integral to membrane

transferase activity, transferring alkyl or aryl (other than methyl) groups

cell differentiation

 
207550_at 0.427 3.170 3.975 1.190e-03 0.158 -0.719 MPL myeloproliferative leukemia virus oncogene 1 43576061 NM_005373 1p34 Hs.82906 85

cytokine receptor activity

plasma membrane

integral to plasma membrane

cell surface receptor linked signal transduction

cell proliferation

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

212814_at 0.528 7.449 3.966 1.211e-03 0.160 -0.735 AHCYL2 adenosylhomocysteinase-like 2 7 128652099, 128795217 AB020635 7q32.1 Hs.600789 5

adenosylhomocysteinase activity

binding

one-carbon metabolic process

metabolic process

hydrolase activity

Cysteine and methionine metabolism

Selenoamino acid metabolism

Metabolic pathways

222408_s_at -0.506 8.246 -3.963 1.220e-03 0.161 -0.741 YPEL5 yippee-like 5 (Drosophila) 2 30223253 BC000836 2p23.1 Hs.515890 6    
202041_s_at 0.479 8.116 3.959 1.229e-03 0.162 -0.748 FIBP fibroblast growth factor (acidic) intracellular binding protein 11 -65407786 NM_004214 11q13.1 Hs.7768 10

protein binding

membrane fraction

nucleus

mitochondrion

fibroblast growth factor receptor signaling pathway

membrane

fibroblast growth factor binding

 
226707_at 0.538 6.513 3.956 1.236e-03 0.162 -0.753 NAPRT1 nicotinate phosphoribosyltransferase domain containing 1 8 -144728097 AI925574 8q24.3 Hs.493164 3

nicotinate phosphoribosyltransferase activity

cytoplasm

cytosol

response to oxidative stress

transferase activity, transferring glycosyl groups

pyridine nucleotide biosynthetic process

 
219461_at 0.363 4.916 3.952 1.246e-03 0.163 -0.761 PAK6 p21 protein (Cdc42/Rac)-activated kinase 6 15 38296920, 38319326 AJ236915 15q14 Hs.513645 13

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

transferase activity

ErbB signaling pathway

Axon guidance

Focal adhesion

T cell receptor signaling pathway

Regulation of actin cytoskeleton

Renal cell carcinoma

219090_at -1.202 7.810 -3.943 1.269e-03 0.165 -0.777 SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 20 19141289 NM_020689 20p13 Hs.654790 2

calcium ion binding

ion transport

potassium ion transport

sodium ion transport

calcium ion transport

calcium, potassium:sodium antiporter activity

symporter activity

antiporter activity

membrane

integral to membrane

potassium ion binding

sodium ion binding

 
202760_s_at 1.129 6.045 3.936 1.289e-03 0.167 -0.791 PALM2-AKAP2 PALM2-AKAP2 readthrough transcript 9 111582397, 111582409 NM_007203 9q31-q33 Hs.591908 8    
219368_at 0.880 4.447 3.931 1.302e-03 0.169 -0.800 NAP1L2 nucleosome assembly protein 1-like 2 X -72348878 NM_021963 Xq13 Hs.66180 Hs.719281 4

nucleus

chromatin assembly complex

nucleosome assembly

 
213844_at 0.453 6.527 3.927 1.312e-03 0.170 -0.807 HOXA5 homeobox A5 7 -27147520 NM_019102 7p15-p14 Hs.655218 32

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

pattern specification process

anterior/posterior pattern formation

lung development

thyroid gland development

multicellular organism growth

sequence-specific DNA binding

embryonic skeletal system morphogenesis

 
239629_at 0.843 7.850 3.923 1.324e-03 0.170 -0.815 CFLAR CASP8 and FADD-like apoptosis regulator 2 201689060, 201689134, 201691631 AI634046 2q33-q34 Hs.390736 163

cysteine-type endopeptidase activity

protein binding

proteolysis

anti-apoptosis

induction of apoptosis by extracellular signals

regulation of apoptosis

positive regulation of I-kappaB kinase/NF-kappaB cascade

interspecies interaction between organisms

Apoptosis

203051_at -0.272 6.643 -3.922 1.326e-03 0.170 -0.816 BAHD1 bromo adjacent homology domain containing 1 15 38520702 NM_014952 15q15.1 Hs.22109 5

DNA binding

 
214030_at -0.374 7.447 -3.919 1.333e-03 0.170 -0.822 CRYBG3 beta-gamma crystallin domain containing 3 3 99078508 BE501352 3q11.2 Hs.714457 2

sugar binding

 
229109_s_at 0.300 5.161 3.918 1.338e-03 0.171 -0.825 BLVRA biliverdin reductase A 7 43764796 N21095 7p14-cen Hs.488143 17

biliverdin reductase activity

binding

cytoplasm

zinc ion binding

oxidoreductase activity

heme catabolic process

metal ion binding

oxidation reduction

Porphyrin and chlorophyll metabolism

241370_at -0.652 7.686 -3.910 1.358e-03 0.172 -0.838 LOC286052 hypothetical protein LOC286052 8   AA278233 8q24.13 Hs.100691 1    
222478_at -0.447 7.940 -3.909 1.362e-03 0.172 -0.840 VPS36 vacuolar protein sorting 36 homolog (S. cerevisiae) 13 -51884737 AL576924 13q14.3 Hs.109520 11

nucleus

cytoplasm

lysosome

late endosome

lipid binding

protein transport

ubiquitin binding

regulation of transcription

Endocytosis

212253_x_at -0.390 7.883 -3.906 1.370e-03 0.173 -0.846 DST dystonin 6 -56587338, -56576527, -56430743, -56430743, -56430743, -56430743, -56430743 BG253119 6p12.1 Hs.631992 Hs.669931 48

actin binding

integrin binding

calcium ion binding

protein binding

protein binding

basement membrane

cytoplasm

cytoplasm

cytoskeleton

cell cycle arrest

cell adhesion

integrin-mediated signaling pathway

protein C-terminus binding

cytoplasmic membrane-bounded vesicle

actin cytoskeleton organization

hemidesmosome

intermediate filament cytoskeleton organization

intermediate filament cytoskeleton organization

intermediate filament cytoskeleton organization

actin filament binding

 
214439_x_at -0.516 10.906 -3.902 1.381e-03 0.174 -0.853 BIN1 bridging integrator 1 2 -127522077, -127522076 AF043899 2q14 Hs.193163 69

protein binding

nucleus

cytoplasm

multicellular organismal development

cell proliferation

actin cytoskeleton

regulation of endocytosis

cell differentiation

interspecies interaction between organisms

 
224791_at 0.569 6.646 3.899 1.391e-03 0.174 -0.860 ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 8 -131133534 AW513835 8q24.1-q24.2 Hs.655552 19

protein binding

cytoplasm

ARF GTPase activator activity

zinc ion binding

membrane

regulation of ARF GTPase activity

metal ion binding

Endocytosis

Fc gamma R-mediated phagocytosis

229656_s_at 0.920 4.706 3.898 1.392e-03 0.174 -0.860 EML6 echinoderm microtubule associated protein like 6 2 54805652 AA236463 2p16.2-p16.1 Hs.656692  

cytoplasm

microtubule

 
223299_at 0.389 7.028 3.898 1.392e-03 0.174 -0.861 SEC11C SEC11 homolog C (S. cerevisiae) 18 54958104 AF212233 18q21.32 Hs.45107 2

endoplasmic reticulum

microsome

signal peptide processing

proteolysis

peptidase activity

membrane

integral to membrane

Protein export

200804_at -0.487 9.253 -3.898 1.393e-03 0.174 -0.861 TMBIM6 transmembrane BAX inhibitor motif containing 6 12 48421559, 48421858 NM_003217 12q12-q13 Hs.35052 Hs.708025 20

insoluble fraction

nucleus

endoplasmic reticulum

integral to plasma membrane

spermatogenesis

membrane

negative regulation of apoptosis

 
220419_s_at -0.653 9.493 -3.897 1.396e-03 0.174 -0.863 USP25 ubiquitin specific peptidase 25 21 16024366 NM_013396 21q11.2 Hs.473370 11

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

protein modification process

proteolysis

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
203752_s_at -0.583 8.942 -3.894 1.405e-03 0.175 -0.869 JUND jun D proto-oncogene 19 -18251562 NM_005354 19p13.2 Hs.2780 67

chromatin

osteoblast development

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

sequence-specific DNA binding

positive regulation of osteoblast differentiation

protein dimerization activity

MAPK signaling pathway

208884_s_at -0.565 7.241 -3.893 1.408e-03 0.175 -0.870 UBR5 ubiquitin protein ligase E3 component n-recognin 5 8 -103334744 AF006010 8q22 Hs.591856 21

RNA binding

ubiquitin-protein ligase activity

protein binding

intracellular

soluble fraction

nucleus

protein modification process

ubiquitin-dependent protein catabolic process

response to DNA damage stimulus

zinc ion binding

cell proliferation

ligase activity

acid-amino acid ligase activity

metal ion binding

progesterone receptor signaling pathway

Ubiquitin mediated proteolysis

238149_at 0.557 2.307 3.891 1.413e-03 0.175 -0.873 ZNF818P zinc finger protein 818 pseudogene 19   AI651641 19q13.42 Hs.444446  

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
201041_s_at -1.164 8.097 -3.882 1.440e-03 0.177 -0.891 DUSP1 dual specificity phosphatase 1 5 -172127706 NM_004417 5q34 Hs.171695 73

non-membrane spanning protein tyrosine phosphatase activity

protein binding

protein amino acid dephosphorylation

response to oxidative stress

cell cycle

intracellular signaling cascade

hydrolase activity

MAP kinase tyrosine/serine/threonine phosphatase activity

MAPK signaling pathway

208649_s_at -0.364 8.396 -3.882 1.441e-03 0.177 -0.891 VCP valosin-containing protein 9 -35046064 AF100752 9p13.3 Hs.529782 97

nucleotide binding

ATP binding

nucleus

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

microsome

cytosol

double-strand break repair

transport

activation of caspase activity

response to DNA damage stimulus

lipid binding

protein ubiquitination

hydrolase activity

ATPase activity

protein domain specific binding

modification-dependent protein catabolic process

ER-associated protein catabolic process

endoplasmic reticulum unfolded protein response

retrograde protein transport, ER to cytosol

regulation of apoptosis

establishment of protein localization

 
206843_at -0.356 4.409 -3.881 1.442e-03 0.177 -0.892 CRYBA4 crystallin, beta A4 22 25347927 NM_001886 22q11.2-q13.1 22q12.1 Hs.57690 13

molecular_function

structural constituent of eye lens

soluble fraction

visual perception

visual perception

camera-type eye development

 
200789_at 0.483 10.678 3.880 1.446e-03 0.177 -0.895 ECH1 enoyl Coenzyme A hydratase 1, peroxisomal 19 -43997901 NM_001398 19q13.1 Hs.196176 9

enoyl-CoA hydratase activity

protein binding

mitochondrion

peroxisome

generation of precursor metabolites and energy

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

metabolic process

isomerase activity

Tyrosine metabolism

205910_s_at 0.366 2.909 3.879 1.448e-03 0.177 -0.896 CEL carboxyl ester lipase (bile salt-stimulated lipase) 9 134927185 NM_001807 9q34.3 Hs.533258 51

sterol esterase activity

sterol esterase activity

triacylglycerol lipase activity

extracellular region

cytoplasm

triglyceride metabolic process

cholesterol catabolic process

cholesterol catabolic process

heparin binding

fatty acid catabolic process

lipid catabolic process

hydrolase activity

protein amino acid esterification

pancreatic juice secretion

intestinal cholesterol absorption

intestinal lipid catabolic process

acylglycerol lipase activity

Steroid biosynthesis

Glycerolipid metabolism

Metabolic pathways

222405_at 0.297 6.985 3.877 1.453e-03 0.177 -0.899 PTPLAD1 protein tyrosine phosphatase-like A domain containing 1 15 63609879 AL573951 15q22.2 Hs.512973 13

molecular_function

GTPase activator activity

protein binding

cellular_component

I-kappaB kinase/NF-kappaB cascade

activation of JUN kinase activity

small GTPase mediated signal transduction

Rho protein signal transduction

membrane

integral to membrane

Rac protein signal transduction

 
215024_at 0.535 4.386 3.874 1.463e-03 0.178 -0.905 C7orf28B chromosome 7 open reading frame 28B 7 -6805096 AK000993 7p22.1 Hs.567779 5    
235944_at 1.085 5.508 3.874 1.463e-03 0.178 -0.905 HMCN1 hemicentin 1 1 183970305 BF446673 1q25.3-q31.1 Hs.58877 14

calcium ion binding

extracellular region

basement membrane

visual perception

bioluminescence

protein-chromophore linkage

response to stimulus

 
244024_at -0.338 4.278 -3.872 1.469e-03 0.178 -0.909 ZNF182 zinc finger protein 182 X -47719193 T67481 Xp22.11-p11.23 Hs.189690 8

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
202985_s_at -0.386 6.914 -3.870 1.477e-03 0.179 -0.914 BAG5 BCL2-associated athanogene 5 14 -103092641, -103092641, -103092641 NM_004873 14q32.33 Hs.5443 10

protein binding

protein folding

apoptosis

 
239261_s_at 0.349 4.830 3.868 1.480e-03 0.179 -0.916 CORIN corin, serine peptidase 4 -47290774 AI338960 4p13-p12 Hs.518618 15

serine-type endopeptidase activity

scavenger receptor activity

plasma membrane

integral to plasma membrane

proteolysis

lipid metabolic process

regulation of blood pressure

peptidase activity

anatomical structure morphogenesis

cell surface

 
221942_s_at 0.553 6.729 3.863 1.497e-03 0.180 -0.926 GUCY1A3 guanylate cyclase 1, soluble, alpha 3 4 156807311, 156807311, 156807311, 156807598, 156807598, 156808264 AI719730 4q31.1-q31.2 4q31.3-q33 Hs.24258 14

nucleotide binding

guanylate cyclase activity

receptor activity

GTP binding

cytoplasm

nitric oxide mediated signal transduction

guanylate cyclase complex, soluble

regulation of blood pressure

positive regulation of cGMP biosynthetic process

response to defense-related host nitric oxide production

relaxation of vascular smooth muscle

Purine metabolism

Vascular smooth muscle contraction

Gap junction

Long-term depression

233438_at 0.491 4.141 3.862 1.501e-03 0.180 -0.928 C6orf162 chromosome 6 open reading frame 162 6 88089024 AK024130 6q15-q16.1 Hs.70769 4

membrane

integral to membrane

 
211382_s_at -0.555 9.133 -3.862 1.502e-03 0.180 -0.929 TACC2 transforming, acidic coiled-coil containing protein 2 10 123738678, 123913094 AF220152 10q26 Hs.501252 Hs.713875 18

protein binding

nucleus

cytoplasm

centrosome

nuclear hormone receptor binding

 
1554966_a_at -0.763 7.394 -3.860 1.506e-03 0.180 -0.931 FILIP1L filamin A interacting protein 1-like 3 -101049461, -101049461, -101034677 AF329092 3q12.1 Hs.104672 8

molecular_function

nucleus

cytoplasm

biological_process

membrane

myosin complex

 
203511_s_at 0.434 7.452 3.856 1.518e-03 0.181 -0.939 TRAPPC3 trafficking protein particle complex 3 1 -36374759 AF041432 1p34.3 Hs.523131 16

Golgi membrane

protein binding

endoplasmic reticulum

Golgi apparatus

cytosol

ER to Golgi vesicle-mediated transport

vesicle-mediated transport

TRAPP complex

 
206404_at 0.906 6.003 3.855 1.522e-03 0.181 -0.941 FGF9 fibroblast growth factor 9 (glia-activating factor) 13 21143214 NM_002010 13q11-q12 Hs.111 33

angiogenesis

osteoblast differentiation

positive regulation of mesenchymal cell proliferation

chondrocyte differentiation

extracellular region

extracellular region

extracellular space

protein import into nucleus

signal transduction

cell-cell signaling

growth factor activity

heparin binding

male gonad development

negative regulation of Wnt receptor signaling pathway

male sex determination

lung development

embryonic limb morphogenesis

positive regulation of vascular endothelial growth factor receptor signaling pathway

inner ear morphogenesis

positive regulation of MAPKKK cascade

positive regulation of fibroblast growth factor receptor signaling pathway

positive regulation of smoothened signaling pathway

regulation of timing of cell differentiation

embryonic gut development

embryonic skeletal system development

positive regulation of epithelial cell proliferation

positive regulation of cardiac muscle cell proliferation

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

226925_at 0.682 5.058 3.852 1.530e-03 0.181 -0.945 ACPL2 acid phosphatase-like 2 3 142433371 AW069729 3q23 Hs.657887 2

acid phosphatase activity

extracellular region

hydrolase activity

 
227583_at -0.268 5.526 -3.851 1.536e-03 0.181 -0.949 POP4 processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae) 19 34789009 BE742653 19q12 Hs.412870 13

ribonuclease MRP complex

RNA binding

ribonuclease P activity

ribonuclease activity

nucleus

nucleolar ribonuclease P complex

nucleolus

rRNA processing

mRNA cleavage

tRNA processing

hydrolase activity

ribonuclease P complex

identical protein binding

 
1554154_at 0.369 5.272 3.850 1.537e-03 0.181 -0.949 GDAP2 ganglioside induced differentiation associated protein 2 1 -118221367, -118207630 BC013132 1p12 Hs.310809 Hs.594430 3    
217882_at -0.599 10.571 -3.847 1.548e-03 0.181 -0.956 TMEM111 transmembrane protein 111 3 -9980635 NM_018447 3p25.3 Hs.475392 6

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
1557165_s_at 0.805 8.697 3.845 1.552e-03 0.181 -0.958 KLHL18 kelch-like 18 (Drosophila) 3 47299333 BM141828 3p21.31 Hs.517946 8

protein binding

 
201591_s_at 0.352 7.508 3.845 1.553e-03 0.181 -0.959 NISCH nischarin 3 52464563 NM_007184 3p21.1 Hs.435290 16

receptor activity

integrin binding

protein binding

membrane fraction

cytoplasm

early endosome

cytosol

plasma membrane

glucose metabolic process

apoptosis

cell communication

regulation of blood pressure

amine receptor activity

Rac protein signal transduction

actin cytoskeleton organization

negative regulation of cell migration

regulation of synaptic transmission, GABAergic

phosphoinositide binding

norepinephrine secretion

recycling endosome

 
201121_s_at 0.496 7.839 3.845 1.553e-03 0.181 -0.959 PGRMC1 progesterone receptor membrane component 1 X 118254238 NM_006667 Xq22-q24 Hs.90061 26

receptor activity

steroid binding

protein binding

nucleus

nucleolus

endoplasmic reticulum

microsome

cell surface

membrane

integral to membrane

heme binding

 
1556601_a_at 0.335 4.468 3.833 1.592e-03 0.185 -0.981 SPATA13 spermatogenesis associated 13 13 23632886 R69077 13q12.12 Hs.657121 7

Rho guanyl-nucleotide exchange factor activity

intracellular

regulation of Rho protein signal transduction

 
202289_s_at -0.494 10.658 -3.832 1.594e-03 0.185 -0.983 TACC2 transforming, acidic coiled-coil containing protein 2 10 123738678, 123913094 NM_006997 10q26 Hs.501252 Hs.713875 18

protein binding

nucleus

cytoplasm

centrosome

nuclear hormone receptor binding

 
1552731_at -1.622 8.049 -3.828 1.608e-03 0.186 -0.990 ABRA actin-binding Rho activating protein 8 -107840886 NM_139166 8q23.1 Hs.374668 12

protein import into nucleus, translocation

transcription coactivator activity

actin binding

cytoplasm

plasma membrane

protein transport

actin cytoskeleton

sarcomere

positive regulation of Rho protein signal transduction

positive regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

positive regulation of transcription factor activity

intracellular protein transmembrane transport

 
222404_x_at 0.480 7.055 3.828 1.610e-03 0.186 -0.991 PTPLAD1 protein tyrosine phosphatase-like A domain containing 1 15 63609879 AI984229 15q22.2 Hs.512973 13

molecular_function

GTPase activator activity

protein binding

cellular_component

I-kappaB kinase/NF-kappaB cascade

activation of JUN kinase activity

small GTPase mediated signal transduction

Rho protein signal transduction

membrane

integral to membrane

Rac protein signal transduction

 
229340_at -0.357 5.796 -3.821 1.632e-03 0.188 -1.004 NKAPL NFKB activating protein-like 6 28335076 BF592882 6p22.1 Hs.239181 3    
211761_s_at -0.390 9.436 -3.813 1.658e-03 0.190 -1.018 CACYBP calcyclin binding protein 1 173235193, 173235514 BC005975 1q24-q25 Hs.508524 15

protein binding

nucleus

cytoplasm

modification-dependent protein catabolic process

Wnt signaling pathway

235374_at 0.465 7.590 3.812 1.664e-03 0.190 -1.021 MDH1 malate dehydrogenase 1, NAD (soluble) 2 63669625 AW952547 2p13.3 Hs.526521 18

malic enzyme activity

binding

soluble fraction

cytoplasm

cytosol

cytosol

glycolysis

tricarboxylic acid cycle

oxaloacetate metabolic process

malate metabolic process

oxidoreductase activity

NAD metabolic process

L-malate dehydrogenase activity

L-malate dehydrogenase activity

cellular carbohydrate metabolic process

NAD or NADH binding

oxidation reduction

Citrate cycle (TCA cycle)

Pyruvate metabolism

Glyoxylate and dicarboxylate metabolism

Carbon fixation in photosynthetic organisms

Reductive carboxylate cycle (CO2 fixation)

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

224759_s_at 0.410 6.947 3.811 1.667e-03 0.190 -1.023 C12orf23 chromosome 12 open reading frame 23 12 105873673 AK001731 12q23.3 Hs.257664 3

membrane

integral to membrane

 
230708_at 0.349 4.821 3.804 1.692e-03 0.192 -1.036 PRICKLE1 prickle homolog 1 (Drosophila) 12 -41138407, -41138407, -41138407 AA206141 12q12 Hs.524348 Hs.639400 14

nucleus

cytoplasm

cytosol

zinc ion binding

membrane

nuclear membrane

metal ion binding

Wnt signaling pathway

233899_x_at -0.427 4.735 -3.799 1.708e-03 0.193 -1.045 ZBTB10 zinc finger and BTB domain containing 10 8 81561002 AK024296 8q13-q21.1 Hs.591868 4

DNA binding

protein binding

intracellular

nucleus

nucleolus

zinc ion binding

regulation of transcription

metal ion binding

 
222413_s_at 0.677 6.180 3.799 1.709e-03 0.193 -1.045 MLL3 myeloid/lymphoid or mixed-lineage leukemia 3 7 -151462942 AW137099 7q36.1 Hs.647120 21

DNA binding

protein binding

nucleus

regulation of transcription, DNA-dependent

intracellular signaling cascade

methyltransferase activity

zinc ion binding

chromatin modification

transferase activity

histone-lysine N-methyltransferase activity

metal ion binding

 
206303_s_at -0.504 6.900 -3.795 1.723e-03 0.193 -1.052 NUDT4 nudix (nucleoside diphosphate linked moiety X)-type motif 4 12 92295831 AF191653 12q21 Hs.506325 10

magnesium ion binding

intracellular

cytoplasm

intracellular signaling cascade

diphosphoinositol-polyphosphate diphosphatase activity

cyclic nucleotide metabolic process

hydrolase activity

calcium-mediated signaling

cyclic-nucleotide-mediated signaling

manganese ion binding

regulation of RNA export from nucleus

intracellular transport

 
214709_s_at -0.478 11.707 -3.794 1.725e-03 0.193 -1.053 KTN1 kinectin 1 (kinesin receptor) 14 55116677, 55116677 Z22551 14q22.1 Hs.509414 30

molecular_function

membrane fraction

endoplasmic reticulum

endoplasmic reticulum membrane

integral to plasma membrane

microtubule-based movement

membrane

 
203685_at -0.845 7.488 -3.794 1.725e-03 0.193 -1.053 BCL2 B-cell CLL/lymphoma 2 18 -59136166, -58941558 NM_000633 18q21.3 18q21.33 Hs.150749 705

G1/S transition of mitotic cell cycle

protein phosphatase type 2A complex

cell morphogenesis

response to acid

ovarian follicle development

ureteric bud development

branching involved in ureteric bud morphogenesis

behavioral fear response

response to hypoxia

B cell homeostasis

release of cytochrome c from mitochondria

regulation of cell-matrix adhesion

protease binding

lymphoid progenitor cell differentiation

B cell lineage commitment

T cell lineage commitment

immune system development

renal system process

intracellular

membrane fraction

nucleus

cytoplasm

mitochondrion

mitochondrial outer membrane

mitochondrial outer membrane

mitochondrial outer membrane

endoplasmic reticulum

endoplasmic reticulum membrane

microsome

cytosol

calcineurin complex

protein amino acid dephosphorylation

melanin metabolic process

oxygen and reactive oxygen species metabolic process

regulation of nitrogen utilization

anti-apoptosis

humoral immune response

response to oxidative stress

actin filament organization

female pregnancy

cell aging

response to nutrient

transcription factor binding

cell death

positive regulation of cell proliferation

male gonad development

activation of pro-apoptotic gene products

response to radiation

response to heat

response to external stimulus

response to toxin

post-embryonic development

organ morphogenesis

response to inorganic substance

response to iron ion

response to UV-B

response to gamma radiation

regulation of gene expression

negative regulation of calcium ion transport into cytosol

regulation of glycoprotein biosynthetic process

mesenchymal cell development

positive regulation of neuron maturation

positive regulation of smooth muscle cell migration

membrane

integral to membrane

cell-cell adhesion

transcription activator activity

peptidyl-threonine phosphorylation

cochlear nucleus development

gland morphogenesis

hemopoiesis

negative regulation of ossification

negative regulation of cell growth

negative regulation of cell migration

response to caffeine

hair follicle morphogenesis

axon regeneration

regulation of protein stability

nuclear membrane

endoplasmic reticulum calcium ion homeostasis

glomerulus development

negative regulation of cellular pH reduction

regulation of protein localization

negative regulation of myeloid cell apoptosis

T cell differentiation in the thymus

positive regulation of peptidyl-serine phosphorylation

negative regulation of osteoblast proliferation

response to cytokine stimulus

response to nicotine

organ growth

positive regulation of multicellular organism growth

B cell proliferation

response to drug

response to hydrogen peroxide

protein homodimerization activity

T cell homeostasis

positive regulation of catalytic activity

myelin sheath

CD8-positive, alpha-beta T cell lineage commitment

response to peptide hormone stimulus

regulation of protein homodimerization activity

regulation of protein heterodimerization activity

negative regulation of neuron apoptosis

ear development

response to estrogen stimulus

regulation of viral genome replication

response to ethanol

positive regulation of melanocyte differentiation

negative regulation of mitotic cell cycle

negative regulation of retinal cell programmed cell death

regulation of mitochondrial membrane permeability

protein heterodimerization activity

focal adhesion formation

positive regulation of pigmentation during development

spleen development

thymus development

gut morphogenesis

developmental growth

oocyte development

positive regulation of skeletal muscle fiber development

pigment granule organization

homeostasis of number of cells within a tissue

response to glucocorticoid stimulus

BH3 domain binding

defense response to virus

regulation of cell cycle

response to protein stimulus

regulation of mitochondrial membrane potential

negative regulation of mitochondrial depolarization

regulation of calcium ion transport

apoptosis in response to endoplasmic reticulum stress

Apoptosis

Focal adhesion

Neurotrophin signaling pathway

Amyotrophic lateral sclerosis (ALS)

Pathways in cancer

Colorectal cancer

Prostate cancer

Small cell lung cancer

1554553_s_at 0.284 5.844 3.791 1.737e-03 0.194 -1.060 YIF1B Yip1 interacting factor homolog B (S. cerevisiae) 19 -43486039, -43486039, -43486039 BC014974 19q13.2 Hs.280741 Hs.631544 4

membrane

integral to membrane

 
203234_at 0.476 6.482 3.790 1.740e-03 0.194 -1.061 UPP1 uridine phosphorylase 1 7 48094879, 48095270 NM_003364 7p12.3 Hs.488240 11

uridine phosphorylase activity

uridine phosphorylase activity

cytoplasm

cytosol

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

pyrimidine nucleotide metabolic process

nucleoside metabolic process

nucleotide catabolic process

uridine metabolic process

Pyrimidine metabolism

Drug metabolism - other enzymes

Metabolic pathways

229477_at 0.946 5.507 3.788 1.748e-03 0.194 -1.065 THRSP thyroid hormone responsive (SPOT14 homolog, rat) 11 77452554 AW272342 11q13.5 Hs.591969 12

protein binding

nucleus

lipid metabolic process

 
229476_s_at 1.068 6.260 3.787 1.749e-03 0.194 -1.066 THRSP thyroid hormone responsive (SPOT14 homolog, rat) 11 77452554 AW272342 11q13.5 Hs.591969 12

protein binding

nucleus

lipid metabolic process

 
213645_at -1.064 6.686 -3.786 1.753e-03 0.194 -1.068 ENOSF1 enolase superfamily member 1 18 -663860, -663860, -662543 AF305057 18p11.32 Hs.369762 Hs.658550 12

magnesium ion binding

cellular_component

mitochondrion

metabolic process

cellular amino acid catabolic process

isomerase activity

 
228624_at 0.382 4.156 3.785 1.759e-03 0.194 -1.071 TMEM144 transmembrane protein 144 4 159350850 AI432488 4q32.1 Hs.718582 2

membrane

integral to membrane

 
224574_at 0.539 7.094 3.783 1.766e-03 0.195 -1.074 C17orf49 chromosome 17 open reading frame 49 17 6858796 AV759602 17p13.1 Hs.511801 7

DNA binding

nucleus

 
231969_at 0.747 6.188 3.782 1.769e-03 0.195 -1.076 STOX2 storkhead box 2 4 185063502 AB037813 4q35.1 Hs.21958 Hs.696657 3    
212427_at -0.801 7.057 -3.780 1.775e-03 0.195 -1.079 KIAA0368 KIAA0368 9 -113162793 AB002366 9q31.3 Hs.368255 12

proteasome complex

binding

nucleus

early endosome

late endosome

endoplasmic reticulum

ER-Golgi intermediate compartment

trans-Golgi network

centrosome

cytosol

cytoplasmic membrane-bounded vesicle

ER to Golgi transport vesicle

ER-associated protein catabolic process

 
219825_at 0.846 4.693 3.780 1.777e-03 0.195 -1.080 CYP26B1 cytochrome P450, family 26, subfamily B, polypeptide 1 2 -72209874 NM_019885 2p13.2 Hs.91546 11

cell fate determination

retinoic acid binding

endoplasmic reticulum

microsome

male meiosis

spermatogenesis

retinoic acid 4-hydroxylase activity

electron carrier activity

proximal/distal pattern formation

membrane

heme binding

embryonic limb morphogenesis

retinoic acid catabolic process

metal ion binding

negative regulation of retinoic acid receptor signaling pathway

oxidation reduction

Retinol metabolism

229085_at -1.923 5.389 -3.776 1.791e-03 0.195 -1.087 LRRC3B leucine rich repeat containing 3B 3 26639303 AW027879 3p24 Hs.517868 10

protein binding

membrane

integral to membrane

 
1567064_at -0.270 3.107 -3.775 1.795e-03 0.195 -1.089 OR1Q1 olfactory receptor, family 1, subfamily Q, member 1 9 124416837 X89667 9q33.2 Hs.684864 3

receptor activity

olfactory receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

sensory perception of smell

integral to membrane

response to stimulus

Olfactory transduction

208086_s_at -0.502 5.055 -3.771 1.808e-03 0.196 -1.096 DMD dystrophin X -31106232, -31047265, -31047265, -31047265, -31047265, -31047265, -31047265, -31047265, -31047265, -31047265 M92650 Xp21.2 Hs.495912 240

actin binding

structural constituent of cytoskeleton

calcium ion binding

protein binding

cytoplasm

cytoskeleton

muscle organ development

zinc ion binding

structural constituent of muscle

structural constituent of muscle

cell surface

dystrophin-associated glycoprotein complex

sarcolemma

costamere

peptide biosynthetic process

nitric-oxide synthase binding

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

218546_at 0.592 6.346 3.768 1.821e-03 0.197 -1.102 C1orf115 chromosome 1 open reading frame 115 1 218930250 NM_024709 1q41 Hs.519839 6

membrane

integral to membrane

 
205079_s_at -0.437 7.872 -3.767 1.825e-03 0.197 -1.104 MPDZ multiple PDZ domain protein 9 -13095702 NM_003829 9p24-p22 Hs.169378 25

protein binding

plasma membrane

tight junction

postsynaptic density

synaptosome

cell junction

dendrite

cell projection

interspecies interaction between organisms

synapse

postsynaptic membrane

Tight junction

212055_at 0.576 5.458 3.763 1.839e-03 0.198 -1.111 C18orf10 chromosome 18 open reading frame 10 18 -32630031 BF689173 18q12.2 Hs.695999 5

cytoplasm

cytoskeleton

microtubule

 
209014_at 0.586 8.529 3.758 1.859e-03 0.200 -1.121 MAGED1 melanoma antigen family D, 1 X 51562894, 51653437 AF217963 Xp11.23 Hs.5258 29

transcription coactivator activity

cytoplasm

plasma membrane

regulation of transcription from RNA polymerase II promoter

identical protein binding

regulation of apoptosis

protein complex

negative regulation of epithelial cell proliferation

Neurotrophin signaling pathway

209083_at 0.383 5.443 3.750 1.891e-03 0.201 -1.136 CORO1A coronin, actin binding protein, 1A 16 30102426 U34690 16p11.2 Hs.415067 23

immunological synapse

phagolysosome formation

phagocytic cup

nucleus

cytoplasm

plasma membrane

cell cortex

calcium ion transport

cell motion

actin filament organization

protein C-terminus binding

regulation of cell shape

lamellipodium

positive regulation of cell migration

leukocyte chemotaxis

phagocytic vesicle membrane

regulation of actin filament polymerization

cortical actin cytoskeleton

cytoplasmic vesicle

cell-substrate adhesion

filamentous actin

uropod organization

response to cytokine stimulus

positive regulation of T cell proliferation

protein homodimerization activity

T cell homeostasis

phosphoinositide 3-kinase binding

innate immune response

homeostasis of number of cells within a tissue

positive chemotaxis

actin filament binding

negative regulation of actin nucleation

 
204264_at 0.704 7.437 3.748 1.895e-03 0.201 -1.138 CPT2 carnitine palmitoyltransferase 2 1 53434688 NM_000098 1p32 Hs.713535 53

carnitine O-palmitoyltransferase activity

carnitine O-palmitoyltransferase activity

mitochondrion

mitochondrial inner membrane

mitochondrial inner membrane

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

transport

carnitine shuttle

acyltransferase activity

membrane

transferase activity

regulation of fatty acid oxidation

Fatty acid metabolism

PPAR signaling pathway

63009_at 0.303 6.412 3.748 1.899e-03 0.201 -1.140 SHQ1 SHQ1 homolog (S. cerevisiae) 3 -72881117 AI188402 3p13 Hs.606584 2    
235301_at 0.561 5.912 3.747 1.900e-03 0.201 -1.140 KIAA1324L KIAA1324-like 7 -86347173, -86347173 AI797353 7q21.12 Hs.208093 3

G-protein coupled receptor activity

protein binding

G-protein coupled receptor protein signaling pathway

membrane

integral to membrane

 
1558668_s_at 0.534 2.445 3.745 1.909e-03 0.201 -1.145 SPATA22 spermatogenesis associated 22 17 -3290063 AW072392 17p13.3 Hs.351068 3    
224918_x_at 1.427 6.884 3.745 1.911e-03 0.201 -1.146 MGST1 microsomal glutathione S-transferase 1 12 16391342, 16391845, 16391978, 16397617 AI220117 12p12.3-p12.1 Hs.389700 22

glutathione transferase activity

mitochondrion

mitochondrial outer membrane

mitochondrial inner membrane

endoplasmic reticulum

microsome

glutathione metabolic process

membrane

transferase activity

Glutathione metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

229770_at 0.560 6.353 3.744 1.912e-03 0.201 -1.146 GLT1D1 glycosyltransferase 1 domain containing 1 12 127904033 AI041543 12q24.33 Hs.655668 6

extracellular region

biosynthetic process

transferase activity, transferring glycosyl groups

 
204234_s_at -0.612 5.164 -3.744 1.914e-03 0.201 -1.147 ZNF195 zinc finger protein 195 11 -3336586 AI476267 11p15.5 Hs.386294 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
201161_s_at -0.482 12.823 -3.743 1.915e-03 0.201 -1.147 CSDA cold shock domain protein A 12 -10742944 NM_003651 12p13.1 Hs.221889 20

negative regulation of transcription from RNA polymerase II promoter

double-stranded DNA binding

transcription factor activity

RNA polymerase II transcription factor activity

transcription corepressor activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

response to cold

Tight junction

205917_at 0.394 6.151 3.739 1.932e-03 0.203 -1.156 ZNF264 zinc finger protein 264 19 62394680 NM_003417 19q13.4 Hs.515634 8

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
213929_at 0.499 2.932 3.738 1.935e-03 0.203 -1.157 EXPH5 exophilin 5 11 -107881367, -107881367, -107881367 AL050204 11q22.3 Hs.28540 8

protein binding

intracellular protein transport

Rab GTPase binding

 
231736_x_at 1.348 6.514 3.736 1.946e-03 0.203 -1.162 MGST1 microsomal glutathione S-transferase 1 12 16391342, 16391845, 16391978, 16397617 NM_020300 12p12.3-p12.1 Hs.389700 22

glutathione transferase activity

mitochondrion

mitochondrial outer membrane

mitochondrial inner membrane

endoplasmic reticulum

microsome

glutathione metabolic process

membrane

transferase activity

Glutathione metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

1565162_s_at 1.786 4.909 3.735 1.948e-03 0.203 -1.163 MGST1 microsomal glutathione S-transferase 1 12 16391342, 16391845, 16391978, 16397617 D16947 12p12.3-p12.1 Hs.389700 22

glutathione transferase activity

mitochondrion

mitochondrial outer membrane

mitochondrial inner membrane

endoplasmic reticulum

microsome

glutathione metabolic process

membrane

transferase activity

Glutathione metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

215102_at 0.365 4.330 3.735 1.949e-03 0.203 -1.163 DPY19L1P1 dpy-19-like 1 pseudogene 1 (C. elegans) 7   AK026768 7p14.3 Hs.633705      
219505_at 0.656 6.139 3.730 1.968e-03 0.204 -1.172 CECR1 cat eye syndrome chromosome region, candidate 1 22 -16040193, -16040191 NM_017424 22q11.2 Hs.170310 10

extracellular region

extracellular space

Golgi apparatus

multicellular organismal development

growth factor activity

purine ribonucleoside monophosphate biosynthetic process

hydrolase activity

deaminase activity

 
225801_at -1.397 5.913 -3.728 1.976e-03 0.204 -1.176 FBXO32 F-box protein 32 8 -124584538, -124584538 AW518714 8q24.13 Hs.403933 17

protein binding

modification-dependent protein catabolic process

 
200924_s_at -0.433 6.644 -3.728 1.977e-03 0.204 -1.176 SLC3A2 solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 11 62380093, 62404862 NM_002394 11q13 Hs.502769 74

catalytic activity

calcium:sodium antiporter activity

protein binding

protein binding

plasma membrane

carbohydrate metabolic process

transport

calcium ion transport

amino acid transport

cell surface

neutral amino acid transmembrane transporter activity

tryptophan transport

integral to membrane

cell growth

melanosome

cation binding

leucine import

 
214726_x_at -0.261 6.791 -3.723 1.998e-03 0.206 -1.186 ADD1 adducin 1 (alpha) 4 2815381 AL556041 4p16.3 Hs.183706 Hs.701490 139

calmodulin binding

nucleus

cytoplasm

cytosol

cytoskeleton

plasma membrane

transcription factor binding

F-actin capping protein complex

actin cytoskeleton organization

spectrin binding

positive regulation of protein binding

protein homodimerization activity

metal ion binding

protein heterodimerization activity

actin filament binding

barbed-end actin filament capping

actin filament bundle formation

 
218844_at 0.466 7.076 3.722 2.003e-03 0.206 -1.188 ACSF2 acyl-CoA synthetase family member 2 17 45858517 NM_025149 17q21.33 Hs.288959 7

nucleotide binding

ATP binding

mitochondrion

lipid metabolic process

fatty acid metabolic process

metabolic process

ligase activity

 
224906_at -0.478 8.706 -3.721 2.008e-03 0.206 -1.190 ANO6 anoctamin 6 12 43896036, 43896036, 43896142, 43972732 AL041280 12q12 Hs.696326 6

ion channel activity

chloride channel activity

calcium ion binding

ion transport

membrane

integral to membrane

chloride ion binding

chloride channel complex

 
1552430_at 0.280 2.228 3.719 2.015e-03 0.207 -1.193 WDR17 WD repeat domain 17 4 177224125 NM_170710 4q34 Hs.532056 3    
213787_s_at 0.463 6.315 3.717 2.024e-03 0.207 -1.197 EBP emopamil binding protein (sterol isomerase) X 48265107 AV702405 Xp11.23-p11.22 Hs.30619 19

C-8 sterol isomerase activity

skeletal system development

steroid delta-isomerase activity

transmembrane receptor activity

endoplasmic reticulum

microsome

integral to plasma membrane

cholesterol biosynthetic process

drug transporter activity

membrane

isomerase activity

hemopoiesis

cholestenol delta-isomerase activity

Steroid biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

1563483_at -0.578 4.036 -3.714 2.035e-03 0.207 -1.202 FAM91A2 family with sequence similarity 91, member A2 1   AB007962 1q21.1 Hs.710717 3    
229817_at 0.793 5.745 3.713 2.040e-03 0.207 -1.205 ZNF608 zinc finger protein 608 5 -124000508 AI452715 5q23.2 Hs.266616 8

intracellular

zinc ion binding

metal ion binding

 
204998_s_at 1.560 6.902 3.703 2.083e-03 0.210 -1.223 ATF5 activating transcription factor 5 19 55123785 NM_012068 19q13.3 Hs.9754 25

transcription factor activity

RNA polymerase II transcription factor activity

transcription corepressor activity

nucleus

transcription factor complex

cytoplasm

regulation of transcription from RNA polymerase II promoter

anti-apoptosis

sequence-specific DNA binding

protein dimerization activity

 
42361_g_at 0.512 4.416 3.701 2.088e-03 0.210 -1.225 CCHCR1 coiled-coil alpha-helical rod protein 1 6 -31218194, -31218194, -2561482, -2561482, -2359996, -2359996 AI588986 6p21.3 Hs.485075 23

protein binding

nucleus

cytoplasm

protein export from nucleus

multicellular organismal development

cell differentiation

 
229492_at 0.335 4.126 3.701 2.091e-03 0.210 -1.227 VANGL1 vang-like 1 (van gogh, Drosophila) 1 115986096 R85437 1p11-p13.1 Hs.515130 12

protein binding

multicellular organismal development

membrane

integral to membrane

Wnt signaling pathway

208173_at -0.421 4.247 -3.700 2.095e-03 0.210 -1.228 IFNB1 interferon, beta 1, fibroblast 9 -21067103 NM_002176 9p21 Hs.93177 127

transcription corepressor activity

cytokine activity

interferon-alpha/beta receptor binding

extracellular region

extracellular space

induction of apoptosis

activation of caspase activity

activation of caspase activity

cell surface receptor linked signal transduction

negative regulation of cell proliferation

response to virus

natural killer cell activation

negative regulation of viral transcription

B cell proliferation

defense response to bacterium

positive regulation of innate immune response

regulation of MHC class I biosynthetic process

negative regulation of virion penetration into host cell

Cytokine-cytokine receptor interaction

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

219848_s_at 0.491 5.699 3.697 2.107e-03 0.211 -1.234 ZNF432 zinc finger protein 432 19 -57228488 NM_014650 19q13.41 Hs.655934 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
201040_at 0.455 6.118 3.695 2.115e-03 0.211 -1.237 GNAI2 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 3 50248650 NM_002070 3p21 Hs.77269 85

nucleotide binding

activation of MAPKK activity

adenosine receptor signaling pathway

GTPase activity

signal transducer activity

protein binding

GTP binding

membrane fraction

nucleus

cytosol

plasma membrane

signal transduction

inhibition of adenylate cyclase activity by G-protein signaling

muscarinic acetylcholine receptor signaling pathway

gamma-aminobutyric acid signaling pathway

protein kinase cascade

response to nutrient

positive regulation of cell proliferation

guanyl nucleotide binding

membrane raft

negative regulation of synaptic transmission

negative regulation of calcium ion transport via voltage-gated calcium channel activity

Chemokine signaling pathway

Axon guidance

Tight junction

Gap junction

Leukocyte transendothelial migration

Long-term depression

Melanogenesis

200972_at -0.579 10.380 -3.692 2.129e-03 0.212 -1.243 TSPAN3 tetraspanin 3 15 -75125385 BC000704 15q24.3 Hs.5062 Hs.716484 8

membrane

integral to membrane

 
228125_at 0.398 6.506 3.691 2.134e-03 0.212 -1.245 ZNF397OS zinc finger protein 397 opposite strand 18 -31086816 BF431973 18q12.2 Hs.464896 3

transcription factor activity

intracellular

nucleus

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
227163_at 0.396 5.026 3.688 2.147e-03 0.212 -1.251 GSTO2 glutathione S-transferase omega 2 10 106018620 AL162742 10q25.1 Hs.203634 27

glutathione transferase activity

cytoplasm

metabolic process

transferase activity

Glutathione metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

213955_at -0.916 10.162 -3.688 2.148e-03 0.212 -1.251 MYOZ3 myozenin 3 5 150020596 BE673151 5q33.1 Hs.91626 7

protein binding

cytoplasm

Z disc

 
230206_at -0.386 5.000 -3.683 2.168e-03 0.213 -1.259 DOCK5 dedicator of cytokinesis 5 8 25098203 AI692645 8p21.2 Hs.195403 7

guanyl-nucleotide exchange factor activity

cytoplasm

 
214959_s_at -0.536 4.404 -3.682 2.172e-03 0.213 -1.261 API5 apoptosis inhibitor 5 11 43290080 AF229253 11p11.2 Hs.435771 15

binding

nucleus

spliceosomal complex

cytoplasm

apoptosis

anti-apoptosis

anti-apoptosis

anti-apoptosis

fibroblast growth factor binding

 
204813_at 0.493 5.818 3.682 2.175e-03 0.213 -1.262 MAPK10 mitogen-activated protein kinase 10 4 -87156655, -87156655, -87156655, -87156655 NM_002753 4q22.1-q23 Hs.125503 54

nucleotide binding

protein serine/threonine kinase activity

JUN kinase activity

MAP kinase activity

MAP kinase kinase activity

ATP binding

cytoplasm

protein amino acid phosphorylation

signal transduction

JNK cascade

transferase activity

MAPK signaling pathway

ErbB signaling pathway

Wnt signaling pathway

Focal adhesion

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

Fc epsilon RI signaling pathway

Neurotrophin signaling pathway

Insulin signaling pathway

GnRH signaling pathway

Adipocytokine signaling pathway

Type II diabetes mellitus

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Colorectal cancer

Pancreatic cancer

1569157_s_at 0.753 4.499 3.680 2.183e-03 0.214 -1.266 ZNF846 zinc finger protein 846 19 -9729150 BC037359 19p13.2 Hs.665717 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
203765_at 0.552 3.772 3.678 2.191e-03 0.214 -1.269 GCA grancalcin, EF-hand calcium binding protein 2 162908828 NM_012198 2q24.2 Hs.377894 14

calcium ion binding

cytoplasm

plasma membrane

membrane fusion

 
204720_s_at 0.977 3.220 3.676 2.202e-03 0.214 -1.274 DNAJC6 DnaJ (Hsp40) homolog, subfamily C, member 6 1 65503017 AV729634 1pter-q31.3 Hs.647643 11

protein tyrosine phosphatase activity

hydrolase activity

SH3 domain binding

heat shock protein binding

Endocytosis

215338_s_at 0.528 7.091 3.675 2.205e-03 0.214 -1.275 NKTR natural killer-tumor recognition sequence 3 42617150 AI688640 3p23-p21 Hs.529509 9

peptidyl-prolyl cis-trans isomerase activity

protein folding

cyclosporin A binding

membrane

isomerase activity

 
205839_s_at 0.442 5.250 3.672 2.217e-03 0.214 -1.279 BZRAP1 benzodiazapine receptor (peripheral) associated protein 1 17 -53733592 NM_004758 17q22-q23 Hs.112499 6

cytoplasm

mitochondrion

biological_process

benzodiazepine receptor binding

 
213831_at 1.736 3.957 3.672 2.218e-03 0.214 -1.280 HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1 6 32713160 X00452 6p21.3 Hs.387679 Hs.706240 542

antigen processing and presentation of peptide or polysaccharide antigen via MHC class II

plasma membrane

integral to plasma membrane

immune response

immune response

membrane

integral to membrane

MHC class II receptor activity

MHC class II receptor activity

MHC class II protein complex

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

231015_at -1.025 8.272 -3.671 2.221e-03 0.214 -1.281 KLF15 Kruppel-like factor 15 3 -127544167 AW014734 3q13-q21 Hs.272215 10

transcription factor activity

protein binding

intracellular

nucleus

zinc ion binding

glucose transport

regulation of transcription

positive regulation of transcription, DNA-dependent

metal ion binding

 
222764_at 0.733 5.550 3.671 2.224e-03 0.214 -1.282 ASRGL1 asparaginase like 1 11 61861349 AI928342 11q12.3 Hs.535326 9

N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity

cytoplasm

hydrolase activity

asparagine catabolic process via L-aspartate

Alanine, aspartate and glutamate metabolism

Cyanoamino acid metabolism

Nitrogen metabolism

Metabolic pathways

219203_at 0.297 8.086 3.670 2.230e-03 0.214 -1.285 FAM158A family with sequence similarity 158, member A 14 -23678013 NM_016049 14q11.2 Hs.271614 4    
203264_s_at 0.452 5.026 3.669 2.232e-03 0.214 -1.286 ARHGEF9 Cdc42 guanine nucleotide exchange factor (GEF) 9 X -62771572 NM_015185 Xq11.1 Hs.54697 10

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

intracellular

cytoplasm

regulation of Rho protein signal transduction

 
229745_x_at -0.505 5.449 -3.664 2.256e-03 0.215 -1.295 DACT3 dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis) 19 -51842708 AI468629 19q13.32 Hs.515490 4    
239178_at 0.579 2.287 3.664 2.257e-03 0.215 -1.296 FGF9 fibroblast growth factor 9 (glia-activating factor) 13 21143214 AL583692 13q11-q12 Hs.111 33

angiogenesis

osteoblast differentiation

positive regulation of mesenchymal cell proliferation

chondrocyte differentiation

extracellular region

extracellular region

extracellular space

protein import into nucleus

signal transduction

cell-cell signaling

growth factor activity

heparin binding

male gonad development

negative regulation of Wnt receptor signaling pathway

male sex determination

lung development

embryonic limb morphogenesis

positive regulation of vascular endothelial growth factor receptor signaling pathway

inner ear morphogenesis

positive regulation of MAPKKK cascade

positive regulation of fibroblast growth factor receptor signaling pathway

positive regulation of smoothened signaling pathway

regulation of timing of cell differentiation

embryonic gut development

embryonic skeletal system development

positive regulation of epithelial cell proliferation

positive regulation of cardiac muscle cell proliferation

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

219418_at -0.399 6.396 -3.661 2.268e-03 0.216 -1.300 NHEJ1 nonhomologous end-joining factor 1 2 -219648289 NM_024782 2q35 Hs.225988 27

DNA binding

nucleus

DNA repair

double-strand break repair via nonhomologous end joining

response to DNA damage stimulus

central nervous system development

response to ionizing radiation

B cell differentiation

T cell differentiation

identical protein binding

positive regulation of ligase activity

Non-homologous end-joining

233750_s_at -0.683 5.204 -3.661 2.269e-03 0.216 -1.300 C1orf25 chromosome 1 open reading frame 25 1 -183353840 AL109865 1q25.2 Hs.107149 6

RNA binding

tRNA (guanine-N2-)-methyltransferase activity

intracellular

behavior

tRNA processing

zinc ion binding

metal ion binding

 
201236_s_at -1.171 8.144 -3.660 2.275e-03 0.216 -1.303 BTG2 BTG family, member 2 1 201541286 NM_006763 1q32 Hs.519162 45

protein binding

DNA repair

protein amino acid methylation

response to DNA damage stimulus

negative regulation of cell proliferation

anterior/posterior pattern formation

neuron differentiation

negative regulation of apoptosis

regulation of transcription

 
207057_at 1.312 6.095 3.659 2.280e-03 0.216 -1.305 SLC16A7 solute carrier family 16, member 7 (monocarboxylic acid transporter 2) 12 58369392 NM_004731 12q13 Hs.439643 8

pyruvate secondary active transmembrane transporter activity

membrane fraction

plasma membrane

integral to plasma membrane

transport

pyruvate transport

symporter activity

secondary active monocarboxylate transmembrane transporter activity

organic anion transport

 
234937_x_at 0.430 4.384 3.658 2.284e-03 0.216 -1.306 ZFP28 zinc finger protein 28 homolog (mouse) 19 61742128 AC007228   Hs.14794 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
211721_s_at 0.390 3.175 3.657 2.289e-03 0.216 -1.308 ZNF551 zinc finger protein 551 19 62885168 BC005868 19q13.43 Hs.109540 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
217781_s_at -0.567 11.287 -3.656 2.295e-03 0.216 -1.310 ZFP106 zinc finger protein 106 homolog (mouse) 15 -40492312 NM_022473 15q15.1 Hs.511143 9

opioid peptide activity

intracellular

membrane fraction

nucleus

nucleolus

cytosol

zinc ion binding

insulin receptor signaling pathway

SH3 domain binding

metal ion binding

 
216843_x_at 0.333 6.238 3.653 2.308e-03 0.216 -1.316 PMS2L1 postmeiotic segregation increased 2-like 1 pseudogene 7 -99756198 U38964 7q22.1 Hs.634244 Hs.661055 Hs.709266 7

molecular_function

ATP binding

cellular_component

mismatch repair

biological_process

kinase activity

transferase activity

mismatched DNA binding

 
210165_at -0.347 5.083 -3.652 2.312e-03 0.216 -1.317 DNASE1 deoxyribonuclease I 16 3642940 M55983 16p13.3 Hs.629638 48

actin binding

endonuclease activity

deoxyribonuclease I activity

deoxyribonuclease activity

calcium ion binding

protein binding

extracellular region

nucleus

nuclear envelope

DNA catabolic process

apoptosis

hydrolase activity

 
231950_at 0.478 4.964 3.649 2.324e-03 0.216 -1.322 ZNF658 zinc finger protein 658 9 -40761401 AW874634 9p13.1 Hs.522147 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
205529_s_at 0.525 5.509 3.649 2.326e-03 0.216 -1.323 RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 8 -93040327, -93040327, -93040327, -93040327 NM_004349 8q22 Hs.368431 85

transcription factor activity

protein binding

nucleus

generation of precursor metabolites and energy

regulation of transcription, DNA-dependent

zinc ion binding

transcription repressor activity

protein homodimerization activity

fat cell differentiation

metal ion binding

regulation of DNA binding

Pathways in cancer

Acute myeloid leukemia

226549_at 0.401 7.461 3.647 2.335e-03 0.217 -1.326 SBK1 SH3-binding domain kinase 1 16 28211340 BF447901 16p11.2 Hs.97837 3

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

transferase activity

 
224477_s_at 0.366 6.507 3.645 2.345e-03 0.217 -1.330 NUDT16L1 nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1 16 4683716 BC006223 16p13.3 Hs.592084 5

cytoplasm

 
206907_at -0.342 4.262 -3.643 2.354e-03 0.217 -1.333 TNFSF9 tumor necrosis factor (ligand) superfamily, member 9 19 6482009 NM_003811 19p13.3 Hs.1524 32

cytokine activity

tumor necrosis factor receptor binding

extracellular space

apoptosis

immune response

signal transduction

cell-cell signaling

cell proliferation

membrane

integral to membrane

Cytokine-cytokine receptor interaction

239359_at -0.354 4.505 -3.642 2.361e-03 0.217 -1.336 MARCH11 membrane-associated ring finger (C3HC4) 11 5 -16120473 AA383208 5p15.1 Hs.662216 2

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

cytoplasmic vesicle

metal ion binding

 
230724_s_at -0.462 7.308 -3.641 2.364e-03 0.217 -1.337 C11orf57 chromosome 11 open reading frame 57 11 111450177 BE549742 11q23.1 Hs.195060 6    
202920_at -0.634 9.060 -3.641 2.367e-03 0.217 -1.339 ANK2 ankyrin 2, neuronal 4 113958687, 114190233 BF726212 4q25-q27 Hs.620557 39

protein binding

cytoplasm

cytoskeleton

plasma membrane

signal transduction

basolateral plasma membrane

apical plasma membrane

M band

 
1554708_s_at 0.367 4.109 3.640 2.368e-03 0.217 -1.339 C9orf68 chromosome 9 open reading frame 68 9 -4588315 BC034293 9p24.2-p24.1 Hs.179615 5    
204117_at -0.421 8.773 -3.639 2.376e-03 0.217 -1.342 PREP prolyl endopeptidase 6 -105832198 NM_002726 6q22 Hs.436564 26

serine-type endopeptidase activity

cytoplasm

proteolysis

peptidase activity

 
232088_x_at 0.540 3.791 3.638 2.379e-03 0.217 -1.343 hCG_2039027 hypothetical LOC100271722 22 -44814452 AL137569 22q13.31 Hs.528519 3    
1557545_s_at 0.541 2.649 3.636 2.389e-03 0.217 -1.347 RNF165 ring finger protein 165 18 42168184 BF529886 18q21.1 Hs.501114 4

protein binding

zinc ion binding

metal ion binding

 
204979_s_at -0.390 11.743 -3.635 2.395e-03 0.217 -1.349 SH3BGR SH3 domain binding glutamic acid-rich protein 21 39739666, 39745649 NM_007341 21q22.3 Hs.473847 8

SH3/SH2 adaptor activity

cytosol

protein complex assembly

SH3 domain binding

 
221931_s_at -0.486 8.078 -3.635 2.396e-03 0.217 -1.350 SEH1L SEH1-like (S. cerevisiae) 18 12937982 AV701173 18p11.21 Hs.301048 9

kinetochore

nucleus

nuclear pore organization

mitotic metaphase plate congression

protein transport

Nup107-160 complex

Nup107-160 complex

mRNA transport

attachment of spindle microtubules to kinetochore during mitosis

intracellular protein transmembrane transport

 
206241_at -0.747 5.551 -3.634 2.398e-03 0.217 -1.350 KPNA5 karyopherin alpha 5 (importin alpha 6) 6 117109059 NM_002269 6q22.1 Hs.182971 46

protein binding

nucleus

nuclear pore

cytoplasm

NLS-bearing substrate import into nucleus

intracellular protein transport

protein transporter activity

 
219632_s_at 0.554 5.676 3.634 2.399e-03 0.217 -1.351 TRPV1 transient receptor potential cation channel, subfamily V, member 1 17 -3415489, -3415489, -3415489, -3415489 AF196175 17p13.2 Hs.579217 Hs.655380 107

nucleotide binding

ion channel activity

calcium channel activity

calcium ion binding

calmodulin binding

ATP binding

plasma membrane

integral to plasma membrane

ion transport

calcium ion transport

cell surface receptor linked signal transduction

chemosensory behavior

thermoception

Neuroactive ligand-receptor interaction

241827_at 0.495 6.408 3.633 2.403e-03 0.217 -1.352 ZNF615 zinc finger protein 615 19 -57186399 AL577866 19q13.41 Hs.368355 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
212586_at -0.549 9.942 -3.633 2.404e-03 0.217 -1.352 CAST calpastatin 5 96023696, 96064251, 96104999 AA195244 5q15 Hs.436186 60

protein binding

calcium-dependent cysteine-type endopeptidase inhibitor activity

 
200848_at -0.548 8.701 -3.633 2.405e-03 0.217 -1.353 AHCYL1 adenosylhomocysteinase-like 1 1 110328830 AA479488 1p13.2 Hs.705418 15

adenosylhomocysteinase activity

binding

endoplasmic reticulum

one-carbon metabolic process

metabolic process

hydrolase activity

Cysteine and methionine metabolism

Selenoamino acid metabolism

Metabolic pathways

1554863_s_at -0.548 7.602 -3.625 2.445e-03 0.219 -1.368 DOK5 docking protein 5 20 52525672 BC008992 20q13.2 Hs.656582 10

MAPKKK cascade

transmembrane receptor protein tyrosine kinase signaling protein activity

insulin receptor binding

transmembrane receptor protein tyrosine kinase signaling pathway

nervous system development

 
201387_s_at 1.235 7.216 3.620 2.471e-03 0.220 -1.377 UCHL1 ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) 4 40953654 NM_004181 4p14 Hs.518731 94

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

protein binding

intracellular

nucleus

nucleolus

cytoplasm

cytoplasm

cytosol

ubiquitin-dependent protein catabolic process

response to stress

axon target recognition

adult walking behavior

peptidase activity

omega peptidase activity

cell proliferation

protein deubiquitination

ligase activity

axon transport of mitochondrion

axon

eating behavior

cell soma

ubiquitin binding

neuromuscular process

Parkinson's disease

218507_at 0.388 5.653 3.619 2.477e-03 0.220 -1.379 C7orf68 chromosome 7 open reading frame 68 7 127883119 NM_013332 7q32.1 Hs.710088 9

molecular_function

cellular_component

response to stress

membrane

integral to membrane

 
225007_at -0.425 7.564 -3.617 2.484e-03 0.220 -1.382 G3BP1 GTPase activating protein (SH3 domain) binding protein 1 5 151131668 AV705516 5q33.1 Hs.587054 27

nucleotide binding

DNA binding

RNA binding

ATP-dependent DNA helicase activity

ATP-dependent RNA helicase activity

helicase activity

endonuclease activity

protein binding

ATP binding

intracellular

nucleus

cytoplasm

cytosol

plasma membrane

transport

Ras protein signal transduction

hydrolase activity

 
238613_at -0.505 9.818 -3.614 2.499e-03 0.221 -1.387 ZAK sterile alpha motif and leucine zipper containing kinase AZK 2 173648810, 173648810 AI475164 2q24.2 Hs.444451 24

cell cycle checkpoint

DNA damage checkpoint

nucleotide binding

activation of MAPKK activity

magnesium ion binding

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

protein tyrosine kinase activity

ATP binding

nucleus

cytoplasm

response to stress

cell cycle

cell cycle arrest

protein kinase cascade

activation of JUN kinase activity

cell death

cell proliferation

response to radiation

transferase activity

cell differentiation

identical protein binding

positive regulation of apoptosis

MAPK signaling pathway

Tight junction

209780_at -1.147 9.763 -3.614 2.503e-03 0.221 -1.389 PHTF2 putative homeodomain transcription factor 2 7 77266044, 77266044, 77307382, 77307382 AL136883 7q11.23-q21 Hs.203965 Hs.601884 11

DNA binding

nucleus

endoplasmic reticulum

regulation of transcription

 
226648_at -0.474 6.811 -3.610 2.521e-03 0.221 -1.395 HIF1AN hypoxia inducible factor 1, alpha subunit inhibitor 10 102285630 AI769745 10q24 Hs.500788 30

peptide-aspartate beta-dioxygenase activity

iron ion binding

protein binding

nucleus

oxidoreductase activity

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

regulation of transcription

metal ion binding

oxidation reduction

 
243618_s_at 0.425 8.093 3.610 2.521e-03 0.221 -1.395 ZNF827 zinc finger protein 827 4 -146901337 BF678830 4q31.21-q31.22 Hs.133916 Hs.633543 7

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
217849_s_at 0.330 5.656 3.610 2.521e-03 0.221 -1.395 CDC42BPB CDC42 binding protein kinase beta (DMPK-like) 14 -102468468 NM_006035 14q32.3 Hs.654634 9

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

small GTPase regulator activity

protein binding

ATP binding

cytoplasm

cytoskeleton

cell-cell junction

protein amino acid phosphorylation

cytoskeleton organization

establishment or maintenance of cell polarity

intracellular signaling cascade

zinc ion binding

transferase activity

diacylglycerol binding

cell leading edge

actin cytoskeleton reorganization

 
233825_s_at -0.678 7.468 -3.609 2.526e-03 0.221 -1.397 CD99L2 CD99 molecule-like 2 X -149685466 AU158444 Xq28 Hs.522805 8

protein binding

plasma membrane

cell adhesion

integral to membrane

cell junction

 
243738_at -0.295 6.025 -3.609 2.527e-03 0.221 -1.397 NMNAT3 nicotinamide nucleotide adenylyltransferase 3 3 -140761722 AW172570 3q23 Hs.208673 6

nucleotide binding

magnesium ion binding

nicotinamide-nucleotide adenylyltransferase activity

nicotinate-nucleotide adenylyltransferase activity

ATP binding

mitochondrion

biosynthetic process

NAD biosynthetic process

transferase activity

nucleotidyltransferase activity

pyridine nucleotide biosynthetic process

Nicotinate and nicotinamide metabolism

Metabolic pathways

210201_x_at -0.483 10.934 -3.609 2.528e-03 0.221 -1.398 BIN1 bridging integrator 1 2 -127522077, -127522076 AF001383 2q14 Hs.193163 69

protein binding

nucleus

cytoplasm

multicellular organismal development

cell proliferation

actin cytoskeleton

regulation of endocytosis

cell differentiation

interspecies interaction between organisms

 
231045_x_at -0.332 8.514 -3.608 2.530e-03 0.221 -1.398 C11orf31 chromosome 11 open reading frame 31 11 57265297 H29876 11q12.1 Hs.655373 Hs.719147 6

selenium binding

cell redox homeostasis

 
219603_s_at 0.452 4.885 3.607 2.536e-03 0.221 -1.400 ZNF226 zinc finger protein 226 19 49361088, 49361088, 49361096, 49361156 NM_015919 19q13.2 Hs.145956 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
206392_s_at 0.577 3.499 3.607 2.538e-03 0.221 -1.401 RARRES1 retinoic acid receptor responder (tazarotene induced) 1 3 -159905133, -159897590 NM_002888 3q25.32 Hs.131269 11

negative regulation of cell proliferation

membrane

integral to membrane

 
1558426_x_at 0.365 7.256 3.603 2.557e-03 0.222 -1.408 ORAI2 ORAI calcium release-activated calcium modulator 2 7 101861000 BC016797 7q22.1 Hs.363308 12

membrane

integral to membrane

 
203961_at 0.472 4.351 3.601 2.570e-03 0.223 -1.413 NEBL nebulette 10 -21108910, -21108910 AL157398 10p12 Hs.5025 15

actin binding

structural constituent of muscle

regulation of actin filament length

 
200798_x_at -0.796 6.800 -3.597 2.593e-03 0.224 -1.420 MCL1 myeloid cell leukemia sequence 1 (BCL2-related) 1 -148813658 NM_021960 1q21 Hs.719112 154

cell fate determination

protein binding

nucleus

nucleoplasm

cytoplasm

mitochondrion

mitochondrial outer membrane

anti-apoptosis

multicellular organismal development

protein channel activity

membrane

integral to membrane

cellular homeostasis

cell differentiation

response to cytokine stimulus

regulation of apoptosis

protein heterodimerization activity

 
206685_at 0.304 3.409 3.596 2.593e-03 0.224 -1.421 HCG4 HLA complex group 4 6 -29866787, -1211427, -1013559 NM_018985 6p21.3 Hs.660431 2    
1554250_s_at 0.513 4.744 3.595 2.600e-03 0.225 -1.423 TRIM73 tripartite motif-containing 73 7 74862838 BC033812 7q11.23 Hs.632307 Hs.661254 5

protein binding

intracellular

zinc ion binding

metal ion binding

 
223298_s_at 0.708 10.065 3.591 2.625e-03 0.225 -1.431 NT5C3 5'-nucleotidase, cytosolic III 7 -33020266, -33020266 AF312735 7p14.3 Hs.487933 22

nucleotide binding

magnesium ion binding

cytoplasm

endoplasmic reticulum

pyrimidine nucleoside metabolic process

5'-nucleotidase activity

5'-nucleotidase activity

2'-phosphotransferase activity

2'-phosphotransferase activity

nucleotide metabolic process

hydrolase activity

Purine metabolism

Pyrimidine metabolism

Nicotinate and nicotinamide metabolism

Biosynthesis of alkaloids derived from histidine and purine

Metabolic pathways

231014_at 0.309 4.971 3.591 2.625e-03 0.225 -1.432 TRIM50 tripartite motif-containing 50 7 -72364470 BG413545 7q11.23 Hs.647053 4

protein binding

intracellular

cytoplasm

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
201195_s_at -0.611 6.278 -3.590 2.628e-03 0.225 -1.433 SLC7A5 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 16 -86421129 AB018009 16q24.3 Hs.513797 44

cytoplasm

cytosol

plasma membrane

cellular amino acid metabolic process

transport

multicellular organismal development

nervous system development

neutral amino acid transmembrane transporter activity

L-amino acid transmembrane transporter activity

neutral amino acid transport

L-amino acid transport

integral to membrane

cell differentiation

peptide antigen binding

 
200993_at -0.385 10.084 -3.590 2.629e-03 0.225 -1.433 IPO7 importin 7 11 9362744 AA939270 11p15.4 Hs.718440 22

protein import into nucleus, docking

small GTPase regulator activity

transporter activity

soluble fraction

nucleus

nuclear pore

cytoplasm

intracellular protein transport

signal transduction

Ran GTPase binding

protein transporter activity

histone binding

interspecies interaction between organisms

 
239582_at 0.278 4.301 3.588 2.637e-03 0.225 -1.436 PML promyelocytic leukemia 15 72074066, 72074066, 72074066 AW514654 15q22 Hs.526464 208

response to hypoxia

DNA binding

intracellular

insoluble fraction

nucleus

nucleoplasm

nucleolus

cytoplasm

protein complex assembly

induction of apoptosis

activation of caspase activity

DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest

cell cycle arrest

transforming growth factor beta receptor signaling pathway

common-partner SMAD protein phosphorylation

SMAD protein nuclear translocation

cell aging

zinc ion binding

negative regulation of cell proliferation

response to UV

response to gamma radiation

nuclear matrix

negative regulation of transcription

negative regulation of angiogenesis

PML body

myeloid cell differentiation

negative regulation of cell growth

transcription regulator activity

PML body organization

ubiquitin protein ligase binding

nuclear membrane

response to cytokine stimulus

DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis

protein homodimerization activity

interspecies interaction between organisms

regulation of MHC class I biosynthetic process

SMAD binding

metal ion binding

retinoic acid receptor signaling pathway

maintenance of protein location in nucleus

Ubiquitin mediated proteolysis

Pathways in cancer

Acute myeloid leukemia

222742_s_at 0.390 8.412 3.588 2.641e-03 0.225 -1.437 RABL5 RAB, member RAS oncogene family-like 5 7 -100743368 AW026449 7q22.1 Hs.389104 4

nucleotide binding

GTP binding

 
203122_at 0.367 7.758 3.585 2.653e-03 0.226 -1.441 TTC15 tetratricopeptide repeat domain 15 2 3362452 NM_016030 2p25.3 Hs.252713 4

binding

 
225911_at 1.023 4.528 3.584 2.663e-03 0.226 -1.445 NPNT nephronectin 4 107036053 AL138410 4q24 Hs.518921 5

calcium ion binding

protein binding

extracellular region

proteinaceous extracellular matrix

cell adhesion

multicellular organismal development

membrane

cell differentiation

 
228279_s_at -0.294 5.243 -3.583 2.664e-03 0.226 -1.445 TNK2 tyrosine kinase, non-receptor, 2 3 -197074632, -197074632 BE676245 3q29 Hs.518513 37

nucleotide binding

magnesium ion binding

non-membrane spanning protein tyrosine kinase activity

GTPase inhibitor activity

protein binding

ATP binding

plasma membrane

protein amino acid phosphorylation

small GTPase mediated signal transduction

transferase activity

positive regulation of peptidyl-tyrosine phosphorylation

 
222470_s_at -0.670 5.467 -3.582 2.670e-03 0.226 -1.447 UQCC ubiquinol-cytochrome c reductase complex chaperone 20 -33353794 AA033998 20q11.22 Hs.714359 16

cytoplasmic vesicle

 
201927_s_at 0.558 4.605 3.582 2.674e-03 0.226 -1.448 PKP4 plakophilin 4 2 159021721 BG292559 2q23-q31 Hs.407580 27

protein binding

cell adhesion

desmosome

 
202942_at 0.569 9.610 3.571 2.731e-03 0.230 -1.467 ETFB electron-transfer-flavoprotein, beta polypeptide 19 -56540220, -56540220 NM_001985 19q13.3 Hs.348531 16

mitochondrion

mitochondrial matrix

transport

electron carrier activity

electron transport chain

 
231727_s_at 0.402 7.053 3.570 2.739e-03 0.230 -1.470 MIF4GD MIF4G domain containing 17 -70773905 NM_020679 17q25.1 Hs.325631 5

protein binding

nucleus

cytoplasm

regulation of translation

RNA metabolic process

 
201905_s_at 0.583 5.396 3.569 2.746e-03 0.230 -1.472 CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like 3 37878672 BF590317 3p21.3 Hs.475963 18

molecular_function

phosphoprotein phosphatase activity

cellular_component

nucleus

biological_process

hydrolase activity

 
209142_s_at -0.738 10.214 -3.568 2.748e-03 0.230 -1.473 UBE2G1 ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast) 17 -4119260 BC002775 17p13.2 1q42 Hs.714345 12

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ubiquitin-dependent protein catabolic process

ligase activity

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

Parkinson's disease

209412_at -0.464 6.010 -3.566 2.763e-03 0.231 -1.478 TRAPPC10 trafficking protein particle complex 10 21 44256633 U61500 21q22.3 Hs.126221 12

Golgi apparatus

sodium ion transport

sodium ion transmembrane transporter activity

integral to membrane

vesicle-mediated transport

 
219493_at 0.559 4.573 3.566 2.764e-03 0.231 -1.478 SHCBP1 SHC SH2-domain binding protein 1 16 -45171968 NM_024745 16q11.2 Hs.123253 17

protein binding

SH2 domain binding

 
209138_x_at 0.794 4.901 3.564 2.770e-03 0.231 -1.480 IGL@ immunoglobulin lambda locus 22   M87790 22q11.1-q11.2 Hs.449585 Hs.561078 20    
223478_at -0.401 7.772 -3.560 2.794e-03 0.231 -1.488 TIMM8B translocase of inner mitochondrial membrane 8 homolog B (yeast) 11 -111461079 AF165967 11q23.1-q23.2 Hs.279915 6

protein binding

mitochondrion

mitochondrial inner membrane presequence translocase complex

sensory perception of sound

zinc ion binding

protein transport

membrane

mitochondrial intermembrane space protein transporter complex

protein import into mitochondrial inner membrane

metal ion binding

intracellular protein transmembrane transport

 
223520_s_at 0.362 3.710 3.560 2.795e-03 0.231 -1.488 KIF13A kinesin family member 13A 6 -17871902, -17868563 AY014403 6p23 Hs.189915 14

nucleotide binding

microtubule motor activity

protein binding

ATP binding

microtubule

microtubule-based movement

protein transport

 
217599_s_at -0.872 5.959 -3.559 2.799e-03 0.231 -1.489 MDFIC MyoD family inhibitor domain containing 7 114349444 BE910600 7q31.1-q31.2 Hs.427236 7

nucleus

nucleolus

cytoplasm

activation of JUN kinase activity

regulation of Wnt receptor signaling pathway

cyclin binding

Tat protein binding

interspecies interaction between organisms

regulation of transcription

positive regulation of viral transcription

 
1558956_s_at 0.396 6.603 3.559 2.803e-03 0.231 -1.490 IFT80 intraflagellar transport 80 homolog (Chlamydomonas) 3 -161457481 AI473255 3q25.33 Hs.478095 7

cytoplasm

 
213327_s_at -0.421 6.620 -3.558 2.806e-03 0.231 -1.492 USP12 ubiquitin specific peptidase 12 13 -26540437 AI820101 13q12.13 Hs.42400 6

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

protein binding

cellular_component

protein modification process

ubiquitin-dependent protein catabolic process

peptidase activity

protein deubiquitination

 
227127_at -0.366 6.114 -3.558 2.810e-03 0.231 -1.493 TMEM110 transmembrane protein 110 3 -52848937 BF222855 3p21.1 Hs.705605 2

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
1553961_s_at 0.556 6.769 3.557 2.813e-03 0.231 -1.494 SNX21 sorting nexin family member 21 20 43895876 CA447177 20q13.12 Hs.472854 8

protein binding

cell communication

protein transport

phosphoinositide binding

 
201397_at 0.296 6.069 3.555 2.822e-03 0.231 -1.497 PHGDH phosphoglycerate dehydrogenase 1 120055941 NM_006623 1p12 Hs.487296 18

phosphoglycerate dehydrogenase activity

L-serine biosynthetic process

brain development

cellular amino acid biosynthetic process

electron carrier activity

oxidoreductase activity

cofactor binding

NAD or NADH binding

oxidation reduction

Glycine, serine and threonine metabolism

Metabolic pathways

218428_s_at 0.526 8.206 3.555 2.824e-03 0.231 -1.497 REV1 REV1 homolog (S. cerevisiae) 2 -99383369 NM_016316 2q11.1-q11.2 Hs.443077 27

magnesium ion binding

damaged DNA binding

DNA-directed DNA polymerase activity

protein binding

intracellular

nucleus

DNA replication

DNA repair

response to DNA damage stimulus

response to UV

transferase activity

deoxycytidyl transferase activity

error-prone postreplication DNA repair

 
226109_at 0.528 6.442 3.554 2.830e-03 0.231 -1.499 C21orf91 chromosome 21 open reading frame 91 21 -18083154 AK023825 21q21.1 Hs.293811 8    
210153_s_at 0.449 7.460 3.553 2.839e-03 0.231 -1.502 ME2 malic enzyme 2, NAD(+)-dependent, mitochondrial 18 46659432 M55905 18q21 6p25-p24 Hs.233119 24

malate dehydrogenase (decarboxylating) activity

binding

mitochondrion

mitochondrial matrix

malate metabolic process

electron carrier activity

oxidoreductase activity

malate dehydrogenase (oxaloacetate-decarboxylating) activity

metal ion binding

NAD or NADH binding

oxidation reduction

Pyruvate metabolism

Biosynthesis of phenylpropanoids

Biosynthesis of alkaloids derived from terpenoid and polyketide

232696_at 0.485 3.719 3.548 2.865e-03 0.233 -1.510 LOC648556 uncharacterized gastric protein ZA43P 16   AI394334   Hs.203594      
238841_at 0.390 5.301 3.548 2.868e-03 0.233 -1.511 PTPDC1 protein tyrosine phosphatase domain containing 1 9 95832896, 95886566 AA651920 9q22.32 Hs.437943 2

protein tyrosine phosphatase activity

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

 
219390_at 0.426 4.786 3.547 2.872e-03 0.233 -1.513 FKBP14 FK506 binding protein 14, 22 kDa 7 -30019408 NM_017946 7p14.3 Hs.571333 7

peptidyl-prolyl cis-trans isomerase activity

calcium ion binding

endoplasmic reticulum

endoplasmic reticulum lumen

protein folding

isomerase activity

 
204783_at -1.499 7.532 -3.545 2.885e-03 0.233 -1.517 MLF1 myeloid leukemia factor 1 3 159771646 AI911434 3q25.1 Hs.85195 14

myeloid progenitor cell differentiation

DNA binding

nucleus

cytoplasm

transcription

cell cycle

cell cycle arrest

multicellular organismal development

protein domain specific binding

cell differentiation

 
218954_s_at -0.538 6.227 -3.544 2.888e-03 0.233 -1.518 BRF2 BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like 8 -37820560 AF298153 8p11.23 Hs.709301 11

protein binding

nucleus

transcription factor complex

transcription initiation

regulation of transcription, DNA-dependent

zinc ion binding

transcription regulator activity

metal ion binding

 
238454_at 0.795 4.467 3.544 2.889e-03 0.233 -1.518 ZNF540 zinc finger protein 540 19 42734147 AA013398 19q13.12 Hs.121283 5

DNA binding

intracellular

nucleus

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
218910_at 0.294 5.975 3.543 2.894e-03 0.233 -1.519 ANO10 anoctamin 10 3 -43382821 NM_018075 3p22.1 Hs.656657 3

ion channel activity

chloride channel activity

calcium ion binding

ion transport

membrane

integral to membrane

chloride ion binding

chloride channel complex

 
217930_s_at 0.388 7.280 3.541 2.905e-03 0.233 -1.523 TOLLIP toll interacting protein 11 -1252176 NM_019009 11p15.5 Hs.368527 24

signal transducer activity

Toll binding

protein binding

cytoplasm

inflammatory response

immune response

intracellular signaling cascade

cell-cell signaling

phosphorylation

interleukin-18 receptor complex

leukocyte activation

interleukin-1 receptor complex

Toll-like receptor signaling pathway

202038_at -0.486 8.304 -3.540 2.915e-03 0.233 -1.526 UBE4A ubiquitination factor E4A (UFD2 homolog, yeast) 11 117735511 NM_004788 11q23.3 Hs.602967 Hs.75275 12

ubiquitin ligase complex

protein polyubiquitination

protein binding

cytoplasm

ubiquitin-dependent protein catabolic process

ubiquitin-ubiquitin ligase activity

Ubiquitin mediated proteolysis

1553177_at -1.172 6.108 -3.540 2.916e-03 0.233 -1.526 SH2D1B SH2 domain containing 1B 1 -160631679 BC022407 1q23.3 Hs.350581 10

molecular_function

protein binding

cellular_component

biological_process

Natural killer cell mediated cytotoxicity

233977_at 0.430 5.994 3.539 2.917e-03 0.233 -1.527 KIAA1772 KIAA1772 18 17076200 AB051559 18q11.1-q11.2 Hs.149020 4

membrane

integral to membrane

 
228831_s_at 0.456 6.001 3.536 2.937e-03 0.234 -1.533 GNG7 guanine nucleotide binding protein (G protein), gamma 7 19 -2462217 AL039870 19p13.3 Hs.515544 12

behavioral fear response

signal transducer activity

heterotrimeric G-protein complex

plasma membrane

signal transduction

receptor guanylyl cyclase signaling pathway

locomotory behavior

regulation of G-protein coupled receptor protein signaling pathway

hormone-mediated signaling

Chemokine signaling pathway

230623_x_at -0.442 7.821 -3.532 2.961e-03 0.236 -1.540 USP28 ubiquitin specific peptidase 28 11 -113173806 AI609285 11q23 Hs.503891 9

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
213957_s_at -0.354 5.306 -3.529 2.979e-03 0.237 -1.545 CEP350 centrosomal protein 350kDa 1 178190530 AA635523 1p36.13-q41 Hs.413045 17

nucleus

centrosome

spindle

 
235328_at 0.321 5.158 3.529 2.983e-03 0.237 -1.547 PLXNC1 plexin C1 12 93066629 AA521145 12q23.3 Hs.584845 10

receptor activity

receptor binding

intracellular

plasma membrane

cell adhesion

signal transduction

multicellular organismal development

integral to membrane

Axon guidance

202065_s_at -0.259 5.816 -3.526 2.996e-03 0.237 -1.551 PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 11 69794470, 69794470 BG033593 11q13.3 Hs.530749 17

signal transducer activity

protein binding

cytoplasm

cell-matrix adhesion

signal transduction

 
226876_at 0.543 7.080 3.526 2.996e-03 0.237 -1.551 FAM101B family with sequence similarity 101, member B 17 -289998 AI961778 17p13 Hs.345588 Hs.596411 Hs.719324 4    
201694_s_at -1.935 7.003 -3.526 2.997e-03 0.237 -1.551 EGR1 early growth response 1 5 137829079 NM_001964 5q31.1 Hs.326035 Hs.708393 174

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

learning or memory

zinc ion binding

transcription activator activity

T cell differentiation

positive regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

Prion diseases

1569566_at -0.926 4.803 -3.526 3.001e-03 0.237 -1.552 TBC1D1 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 4 37569114 BC028196 4p14 Hs.176503 15

GTPase activator activity

Rab GTPase activator activity

intracellular

nucleus

regulation of Rab GTPase activity

 
229088_at 0.536 4.195 3.525 3.007e-03 0.237 -1.554 ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 6 132170848 BF591996 6q22-q23 Hs.527295 107

nucleic acid binding

phosphodiesterase I activity

nucleotide diphosphatase activity

nucleotide diphosphatase activity

scavenger receptor activity

insulin receptor binding

protein binding

ATP binding

extracellular space

plasma membrane

plasma membrane

generation of precursor metabolites and energy

phosphate metabolic process

immune response

metabolic process

nucleoside triphosphate catabolic process

cell surface

integral to membrane

basolateral plasma membrane

hydrolase activity

polysaccharide binding

negative regulation of cell growth

regulation of bone mineralization

inorganic diphosphate transport

cellular phosphate ion homeostasis

sequestering of triglyceride

biomineral formation

negative regulation of protein amino acid autophosphorylation

cellular response to insulin stimulus

protein homodimerization activity

negative regulation of fat cell differentiation

negative regulation of glycogen biosynthetic process

negative regulation of glucose import

negative regulation of insulin receptor signaling pathway

metal ion binding

nucleoside-triphosphate diphosphatase activity

3'-phosphoadenosine 5'-phosphosulfate metabolic process

3'-phosphoadenosine 5'-phosphosulfate binding

Purine metabolism

Starch and sucrose metabolism

Riboflavin metabolism

Nicotinate and nicotinamide metabolism

Pantothenate and CoA biosynthesis

Metabolic pathways

218857_s_at 0.510 6.547 3.524 3.014e-03 0.237 -1.556 ASRGL1 asparaginase like 1 11 61861349 NM_025080 11q12.3 Hs.535326 9

N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity

cytoplasm

hydrolase activity

asparagine catabolic process via L-aspartate

Alanine, aspartate and glutamate metabolism

Cyanoamino acid metabolism

Nitrogen metabolism

Metabolic pathways

218695_at 0.596 6.821 3.521 3.027e-03 0.237 -1.560 EXOSC4 exosome component 4 8 145205509 NM_019037 8q24.3 Hs.632041 16

3'-5'-exoribonuclease activity

exosome (RNase complex)

RNA binding

exonuclease activity

protein binding

nucleus

nucleolus

cytoplasm

rRNA processing

RNA processing

hydrolase activity

RNA degradation

221959_at -0.364 5.923 -3.521 3.033e-03 0.237 -1.562 FAM110B family with sequence similarity 110, member B 8 59069666 BE672313 8q12.1 Hs.154652 7

cytoplasm

mitochondrion

centrosome

 
213328_at 0.384 5.439 3.520 3.036e-03 0.237 -1.563 NEK1 NIMA (never in mitosis gene a)-related kinase 1 4 -170551003 AI936517 4q33 Hs.481181 11

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

cell cycle

mitosis

transferase activity

cell division

 
203138_at -0.538 8.667 -3.520 3.038e-03 0.237 -1.563 HAT1 histone acetyltransferase 1 2 172487180 NM_003642 2q31.2-q33.1 Hs.632532 14

histone acetyltransferase activity

protein binding

nucleus

cytoplasm

DNA packaging

chromatin silencing at telomere

internal protein amino acid acetylation

acyltransferase activity

chromatin modification

histone acetylation

transferase activity

 
204058_at 0.617 9.331 3.519 3.041e-03 0.237 -1.564 ME1 malic enzyme 1, NADP(+)-dependent, cytosolic 6 -83976828 AL049699 6q12 Hs.21160 24

malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity

malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity

binding

nucleus

nucleolus

cytoplasm

cytosol

carbohydrate metabolic process

malate metabolic process

NADP biosynthetic process

electron carrier activity

response to hormone stimulus

response to carbohydrate stimulus

oxidoreductase activity

manganese ion binding

ADP binding

metal ion binding

NADP or NADPH binding

NAD or NADH binding

oxidation reduction

Pyruvate metabolism

Carbon fixation in photosynthetic organisms

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Metabolic pathways

PPAR signaling pathway

212998_x_at 0.899 5.689 3.516 3.061e-03 0.238 -1.570 HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 6 -32735634 AI583173 6p21.3 Hs.409934 Hs.534322 Hs.713773 998

antigen processing and presentation of peptide or polysaccharide antigen via MHC class II

plasma membrane

immune response

immune response

membrane

membrane

integral to membrane

MHC class II receptor activity

MHC class II protein complex

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

229176_at -0.476 5.700 -3.509 3.109e-03 0.241 -1.584 ANKH ankylosis, progressive homolog (mouse) 5 -14757908 AI672354 5p15.1 Hs.156727 36

skeletal system development

inorganic phosphate transmembrane transporter activity

integral to plasma membrane

transport

phosphate transport

locomotory behavior

outer membrane

outer membrane

regulation of bone mineralization

regulation of bone mineralization

inorganic diphosphate transmembrane transporter activity

 
224566_at -0.868 10.652 -3.507 3.122e-03 0.241 -1.588 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 11 64946844, 64946844 AI042152 11q13.1 Hs.523789 Hs.648467 6    
225191_at 0.432 7.279 3.506 3.124e-03 0.241 -1.588 CIRBP cold inducible RNA binding protein 19 1220266, 1220266 AL565767 19p13.3 Hs.634522 Hs.664127 17

nucleotide binding

RNA binding

protein binding

nucleus

nucleoplasm

response to cold

 
208767_s_at -1.204 9.437 -3.503 3.142e-03 0.241 -1.593 LAPTM4B lysosomal protein transmembrane 4 beta 8 98856984 AW149681 8q22.1 Hs.492314 17

transport

endomembrane system

membrane

integral to membrane

Lysosome

225419_at -0.252 6.913 -3.502 3.151e-03 0.241 -1.596 C7orf11 chromosome 7 open reading frame 11 7 -40138866 AI869704 7p14.1 Hs.654989 9

nucleus

 
1557057_a_at 0.262 1.972 3.501 3.156e-03 0.241 -1.597 C5orf47 chromosome 5 open reading frame 47 5 173348767 AL039665 5q35.2 Hs.131469 1    
238843_at -0.524 6.833 -3.501 3.157e-03 0.241 -1.598 NPHP1 nephronophthisis 1 (juvenile) 2 -110238202 BF216535 2q13 Hs.280388 36

structural molecule activity

protein binding

adherens junction

signal transduction

excretion

visual behavior

membrane

cell-cell adhesion

actin cytoskeleton organization

cell junction

 
206724_at 0.339 2.794 3.501 3.159e-03 0.241 -1.598 CBX4 chromobox homolog 4 (Pc class homolog, Drosophila) 17 -75421549 NM_003655 17q25.3 Hs.714363 25

chromatin

chromatin binding

transcription corepressor activity

nucleus

chromatin assembly or disassembly

anti-apoptosis

negative regulation of transcription

chromatin modification

enzyme binding

modification-dependent protein catabolic process

 
201297_s_at -0.595 5.545 -3.501 3.161e-03 0.241 -1.599 MOBKL1B MOB1, Mps One Binder kinase activator-like 1B (yeast) 2 -74236718 AK023321 2p13.1 Hs.196437 12

protein binding

zinc ion binding

metal ion binding

 
228863_at 0.556 4.329 3.500 3.164e-03 0.241 -1.600 PCDH17 protocadherin 17 13 57103789 N69091 13q21.1 Hs.106511 11

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

 
201471_s_at -0.368 9.615 -3.498 3.179e-03 0.241 -1.604 SQSTM1 sequestosome 1 5 179165993, 179166608, 179180447 NM_003900 5q35 Hs.437277 100

protein kinase C binding

protein binding

nucleus

cytoplasm

late endosome

cytosol

cytosol

ubiquitin-dependent protein catabolic process

apoptosis

response to stress

immune response

intracellular signaling cascade

protein localization

zinc ion binding

endosome transport

cell differentiation

receptor tyrosine kinase binding

SH2 domain binding

SH2 domain binding

regulation of I-kappaB kinase/NF-kappaB cascade

regulation of I-kappaB kinase/NF-kappaB cascade

ubiquitin binding

ubiquitin binding

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

 
213552_at 0.453 4.640 3.497 3.186e-03 0.241 -1.606 GLCE glucuronic acid epimerase 15 67240026 W87398 15q23 Hs.183006 9

Golgi apparatus

heparan sulfate proteoglycan biosynthetic process

membrane

integral to membrane

isomerase activity

heparin biosynthetic process

UDP-glucuronate 5'-epimerase activity

Heparan sulfate biosynthesis

Metabolic pathways

202393_s_at -0.854 9.258 -3.497 3.187e-03 0.241 -1.606 KLF10 Kruppel-like factor 10 8 -103730182, -103730182 NM_005655 8q22.2 Hs.435001 26

negative regulation of transcription from RNA polymerase II promoter

skeletal system development

transcription factor activity

protein binding

intracellular

nucleus

transforming growth factor beta receptor signaling pathway

cell-cell signaling

zinc ion binding

negative regulation of cell proliferation

regulation of transcription

metal ion binding

 
225962_at 0.433 5.216 3.496 3.192e-03 0.241 -1.608 ZNRF1 zinc and ring finger 1 16 73590415 AI199541 16q23.1 Hs.427284 11

protein binding

lysosome

endosome

zinc ion binding

membrane

ligase activity

modification-dependent protein catabolic process

cell junction

cytoplasmic vesicle

synapse

metal ion binding

 
227339_at -0.320 5.458 -3.495 3.196e-03 0.241 -1.609 RGMB RGM domain family, member B 5 98132898 BE206621 5q15 Hs.526902 5

ER-Golgi intermediate compartment

plasma membrane

cell adhesion

signal transduction

BMP signaling pathway

identical protein binding

positive regulation of transcription

anchored to plasma membrane

 
219396_s_at 0.287 6.138 3.495 3.200e-03 0.241 -1.610 NEIL1 nei endonuclease VIII-like 1 (E. coli) 15 73426383 NM_024608 15q24.2 Hs.512732 35

damaged DNA binding

DNA-(apurinic or apyrimidinic site) lyase activity

nucleus

cytoplasm

base-excision repair

nucleotide-excision repair

response to DNA damage stimulus

response to oxidative stress

protein C-terminus binding

metabolic process

zinc ion binding

lyase activity

DNA N-glycosylase activity

negative regulation of nuclease activity

Base excision repair

238975_at 0.419 4.701 3.494 3.204e-03 0.241 -1.611 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 12 -108475903 AI671390 12q24 Hs.12106 16

nucleotide binding

ATP binding

mitochondrion

cob(I)yrinic acid a,c-diamide adenosyltransferase activity

cobalamin biosynthetic process

transferase activity

Porphyrin and chlorophyll metabolism

Metabolic pathways

213906_at 0.411 4.429 3.492 3.220e-03 0.241 -1.615 MYBL1 v-myb myeloblastosis viral oncogene homolog (avian)-like 1 8 -67636963 AW592266 8q22 Hs.445898 8

DNA binding

nucleus

nucleolus

regulation of transcription, DNA-dependent

transcription activator activity

 
1559190_s_at 0.530 5.767 3.488 3.241e-03 0.242 -1.621 RDH13 retinol dehydrogenase 13 (all-trans/9-cis) 19 -60247503, -60247503 AL833150 19q13.42 Hs.327631 9

binding

oxidoreductase activity

oxidation reduction

 
220233_at 0.378 5.404 3.485 3.267e-03 0.243 -1.628 FBXO17 F-box protein 17 19 -44123881, -44123881 NM_024907 19q13.2 Hs.531770 7

protein binding

modification-dependent protein catabolic process

protein catabolic process

 
212337_at -0.355 6.380 -3.484 3.271e-03 0.243 -1.630 TUG1 taurine upregulated 1 (non-protein coding) 22 29695633 AI687738 22q12.2 Hs.554829 7    
205471_s_at 0.573 4.605 3.483 3.277e-03 0.243 -1.631 DACH1 dachshund homolog 1 (Drosophila) 13 -70910098 AW772082 13q22 Hs.129452 24

nucleotide binding

transcription factor activity

protein binding

nucleus

transcription factor complex

cytoplasm

multicellular organismal development

regulation of transcription

 
213012_at -0.955 7.748 -3.481 3.290e-03 0.243 -1.635 NEDD4 neural precursor cell expressed, developmentally down-regulated 4 15 -53906413, -53906413 D42055 15q Hs.1565 79

ubiquitin ligase complex

chromatin

ubiquitin-protein ligase activity

intracellular

membrane fraction

cytoplasm

cytosol

plasma membrane

cell cortex

protein modification process

protein targeting to lysosome

pathogenesis

negative regulation of sodium ion transport

negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage

positive regulation of phosphoinositide 3-kinase cascade

apicolateral plasma membrane

ligase activity

acid-amino acid ligase activity

transmission of virus

sodium channel inhibitor activity

protein domain specific binding

modification-dependent protein catabolic process

neuron projection development

receptor internalization

beta-2 adrenergic receptor binding

receptor catabolic process

cellular response to UV

protein ubiquitination during ubiquitin-dependent protein catabolic process

glucocorticoid receptor signaling pathway

ubiquitin binding

ubiquitin binding

positive regulation of protein catabolic process

positive regulation of nucleocytoplasmic transport

perinuclear region of cytoplasm

phosphoserine binding

phosphothreonine binding

progesterone receptor signaling pathway

response to calcium ion

RNA polymerase binding

proline-rich region binding

Ubiquitin mediated proteolysis

Endocytosis

217924_at -0.416 6.187 -3.480 3.295e-03 0.243 -1.636 C6orf106 chromosome 6 open reading frame 106 6 -34663047 AL523965 6p21.31 Hs.643498 10    
209637_s_at 0.369 4.026 3.480 3.298e-03 0.243 -1.637 RGS12 regulator of G-protein signaling 12 4 3285671, 3285671, 3341521 AA887475 4p16.3 Hs.527061 14

condensed nuclear chromosome

receptor signaling protein activity

GTPase activator activity

protein binding

nucleus

regulation of G-protein coupled receptor protein signaling pathway

negative regulation of signal transduction

 
221808_at -0.435 7.489 -3.479 3.305e-03 0.243 -1.639 RAB9A RAB9A, member RAS oncogene family X 13617261 NM_004251 Xp22.2 Hs.495704 24

Golgi membrane

nucleotide binding

GTPase activity

protein binding

GTP binding

lysosome

late endosome

endoplasmic reticulum

endoplasmic reticulum membrane

Golgi apparatus

plasma membrane

small GTPase mediated signal transduction

protein transport

 
227285_at -1.414 6.543 -3.478 3.309e-03 0.243 -1.640 C1orf51 chromosome 1 open reading frame 51 1 148521852 AW080835 1q21.2 Hs.54680 4    
226770_at 0.402 4.535 3.477 3.317e-03 0.243 -1.642 MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 1 113734997, 113734997 AI692181 1p12-p11.2 Hs.486189 13

nucleotide binding

protein binding

ATP binding

nucleus

plasma membrane

tight junction

cell junction

interspecies interaction between organisms

Tight junction

228501_at 0.633 5.727 3.477 3.321e-03 0.243 -1.643 GALNTL2 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2 3 16191187 BF055343 3p25.1 Hs.411308 10

polypeptide N-acetylgalactosaminyltransferase activity

calcium ion binding

sugar binding

Golgi apparatus

membrane

integral to membrane

transferase activity, transferring glycosyl groups

transport vesicle

manganese ion binding

O-Glycan biosynthesis

Metabolic pathways

1560128_x_at 0.361 5.796 3.476 3.324e-03 0.243 -1.644 C5orf56 chromosome 5 open reading frame 56 5 131774571 AL713721 5q31.1 Hs.658288 1    
200941_at -0.463 7.861 -3.476 3.326e-03 0.243 -1.645 HSBP1 heat shock factor binding protein 1 16 82399093 AK026575 16q23.3 Hs.250899 Hs.705549 8

negative regulation of transcription from RNA polymerase II promoter

transcription corepressor activity

nucleus

 
213737_x_at 0.330 8.885 3.476 3.328e-03 0.243 -1.645 GOLGA9P golgi autoantigen, golgin subfamily a, 9 pseudogene 15 20806682 AI620911 15q11.2 Hs.375441 2    
212307_s_at -0.375 7.187 -3.475 3.334e-03 0.243 -1.647 OGT O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) X 70669657 BF001665 Xq13 Hs.405410 47

protein binding

nucleus

cytoplasm

cytosol

protein amino acid O-linked glycosylation

signal transduction

response to nutrient

acetylglucosaminyltransferase activity

transferase activity, transferring glycosyl groups

MLL5-L complex

O-Glycan biosynthesis

Metabolic pathways

230669_at 0.469 5.933 3.473 3.347e-03 0.244 -1.650 RASA2 RAS p21 protein activator 2 3 142688615 W38444 3q22-q23 Hs.655941 7

Ras GTPase activator activity

intracellular

cytoplasm

intracellular signaling cascade

zinc ion binding

metal ion binding

perinuclear region of cytoplasm

regulation of small GTPase mediated signal transduction

MAPK signaling pathway

226086_at 0.624 4.715 3.472 3.354e-03 0.244 -1.652 SYT13 synaptotagmin XIII 11 -45218428 AB037848 11p12-p11 Hs.436643 12

integral to plasma membrane

membrane

vesicle-mediated transport

transport vesicle

 
217811_at -0.357 8.433 -3.470 3.364e-03 0.245 -1.655 SELT selenoprotein T 3 151803755 NM_016275 3q25.1 Hs.369052 9

selenocysteine incorporation

selenium binding

cell redox homeostasis

 
221889_at 0.327 4.909 3.469 3.377e-03 0.245 -1.658 KCTD13 potassium channel tetramerisation domain containing 13 16 -29825161 AW026481 16p11.2 Hs.534590 9

voltage-gated potassium channel activity

nucleus

DNA replication

potassium ion transport

voltage-gated potassium channel complex

membrane

identical protein binding

 
202236_s_at -0.787 8.193 -3.468 3.379e-03 0.245 -1.659 SLC16A1 solute carrier family 16, member 1 (monocarboxylic acid transporter 1) 1 -113255992 NM_003051 1p12 Hs.75231 43

protein binding

membrane fraction

plasma membrane

transport

mevalonate transmembrane transporter activity

symporter activity

secondary active monocarboxylate transmembrane transporter activity

organic anion transport

mevalonate transport

integral to membrane

 
224638_at 0.277 5.462 3.467 3.391e-03 0.246 -1.662 UNQ1887 signal peptide peptidase 3 12 -119685417 AI338356 12q24.31 Hs.507087 Hs.683964 12

aspartic-type endopeptidase activity

peptidase activity

membrane

integral to membrane

 
37145_at 0.527 4.501 3.465 3.403e-03 0.246 -1.665 GNLY granulysin 2 85774924 M85276 2p11.2 Hs.105806 36

extracellular region

extracellular space

xenobiotic metabolic process

cellular defense response

defense response to bacterium

defense response to fungus

 
217992_s_at 0.311 5.492 3.464 3.406e-03 0.246 -1.666 EFHD2 EF-hand domain family, member D2 1 15608977 NM_024329 1p36.21 Hs.465374 8

calcium ion binding

protein binding

 
1558080_s_at 0.387 3.350 3.462 3.424e-03 0.247 -1.671 DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 13 95127402 BG913589 13q32.1 Hs.59214 19

protein kinase inhibitor activity

binding

cytoplasm

endoplasmic reticulum

response to unfolded protein

response to virus

heat shock protein binding

 
226582_at 0.487 5.377 3.460 3.435e-03 0.247 -1.674 LOC400043 hypothetical LOC400043 12 52806121 AL520272 12q13.13 Hs.19193 2    
202363_at 0.949 6.012 3.460 3.438e-03 0.247 -1.674 SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 5 -136338885 AF231124 5q31 Hs.643338 15

calcium ion binding

extracellular region

proteinaceous extracellular matrix

cell motion

cell adhesion

signal transduction

multicellular organismal development

nervous system development

cell proliferation

 
206256_at -0.269 4.596 -3.458 3.452e-03 0.247 -1.678 CPN1 carboxypeptidase N, polypeptide 1 10 -101792054 NM_001308 10q24.2 Hs.2246 16

metallocarboxypeptidase activity

extracellular region

extracellular space

proteolysis

peptidase activity

metallopeptidase activity

zinc ion binding

metal ion binding

 
200850_s_at -0.569 8.902 -3.457 3.462e-03 0.247 -1.681 AHCYL1 adenosylhomocysteinase-like 1 1 110328830 NM_006621 1p13.2 Hs.705418 15

adenosylhomocysteinase activity

binding

endoplasmic reticulum

one-carbon metabolic process

metabolic process

hydrolase activity

Cysteine and methionine metabolism

Selenoamino acid metabolism

Metabolic pathways

222186_at 0.300 5.016 3.456 3.463e-03 0.247 -1.681 ZFAND6 zinc finger, AN1-type domain 6 15 78139075 AL109684 15q25.1 Hs.719106 8

molecular_function

DNA binding

protein binding

cellular_component

signal transduction

biological_process

zinc ion binding

metal ion binding

 
234996_at 0.351 2.831 3.456 3.468e-03 0.247 -1.682 CALCRL calcitonin receptor-like 2 -187916093 AI478743 2q32.1 Hs.470882 56

calcitonin receptor activity

plasma membrane

integral to plasma membrane

G-protein signaling, coupled to cyclic nucleotide second messenger

Neuroactive ligand-receptor interaction

Vascular smooth muscle contraction

225819_at -0.473 5.926 -3.455 3.470e-03 0.247 -1.683 TBRG1 transforming growth factor beta regulator 1 11 123997951 AA576946 11q24.2 Hs.436410 11

DNA binding

protein binding

nucleus

DNA replication

cell cycle

cell cycle arrest

negative regulation of cell proliferation

nucleolus to nucleoplasm transport

protein stabilization

 
227474_at 0.818 5.040 3.454 3.477e-03 0.247 -1.685 LOC654433 hypothetical LOC654433 2 113710316 AY007128 2q13 Hs.656660 4    
1552791_a_at -1.322 9.065 -3.451 3.498e-03 0.248 -1.690 TRDN triadin 6 -123579181 NM_006073 6q22-q23 Hs.654601 19

receptor binding

cytoplasm

plasma membrane

muscle contraction

integral to membrane

sarcoplasmic reticulum

 
209982_s_at 0.314 4.303 3.451 3.500e-03 0.248 -1.691 NRXN2 neurexin 2 11 -64130221, -64130221 AA608820 11q13 Hs.372938 16

calcium ion binding

protein binding

cell adhesion

membrane

integral to membrane

Cell adhesion molecules (CAMs)

1565685_at -0.231 2.573 -3.449 3.516e-03 0.248 -1.695 LOC400940 hypothetical LOC400940 2 6039560 AA774300 2p25.2 Hs.378814 2    
227198_at 1.654 4.681 3.447 3.528e-03 0.249 -1.698 AFF3 AF4/FMR2 family, member 3 2 -99530147, -99530147 AW085505 2q11.2-q12 Hs.444414 16

DNA binding

nucleus

multicellular organismal development

regulation of transcription

 
206818_s_at 0.260 4.704 3.447 3.530e-03 0.249 -1.698 CNNM2 cyclin M2 10 104668103, 104668103 NM_017649 10q24.32 Hs.657970 Hs.719266 3

ion transport

membrane

integral to membrane

 
224444_s_at 0.582 5.346 3.446 3.541e-03 0.249 -1.701 C1orf97 chromosome 1 open reading frame 97 1 209622719 BC005997 1q32.3 Hs.523932 4    
1556351_at -0.863 3.388 -3.445 3.544e-03 0.249 -1.702 HCN1 hyperpolarization activated cyclic nucleotide-gated potassium channel 1 5 -45295108 BM682352 5p12 Hs.650434 17

nucleotide binding

voltage-gated ion channel activity

voltage-gated potassium channel activity

sodium channel activity

protein binding

ion transport

potassium ion transport

sodium ion transport

membrane

integral to membrane

axon

dendrite

cAMP binding

potassium ion binding

sodium ion binding

apical protein localization

 
202919_at -0.438 8.679 -3.443 3.561e-03 0.249 -1.706 MOBKL3 MOB1, Mps One Binder kinase activator-like 3 (yeast) 2 198088564, 198089015 NM_015387 2q33.1 Hs.645458 13

protein binding

cytoplasm

Golgi apparatus

transport

zinc ion binding

membrane

metal ion binding

perinuclear region of cytoplasm

 
1564063_a_at -0.302 5.207 -3.443 3.562e-03 0.249 -1.706 ATP11B ATPase, class VI, type 11B 3 183993984 AK093727 3q27 Hs.478429 8

nucleotide binding

magnesium ion binding

phospholipid-translocating ATPase activity

ATP binding

nuclear inner membrane

ATP biosynthetic process

ion transport

metabolic process

ion transmembrane transporter activity

ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism

phospholipid transport

aminophospholipid transport

membrane

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

 
235554_x_at -0.556 4.814 -3.443 3.562e-03 0.249 -1.706 PACRGL PARK2 co-regulated-like 4 20311133 BE048198 4p15.31 Hs.479298 5

binding

 
211194_s_at -0.429 4.551 -3.440 3.580e-03 0.250 -1.711 TP63 tumor protein p63 3 190831909, 190831909, 190990142, 190990142 AB010153 3q28 Hs.137569 238

response to tumor cell

transcription factor activity

nucleus

nucleus

cytoplasm

apoptosis

induction of apoptosis

multicellular organismal development

zinc ion binding

transcription activator activity

transcription activator activity

transcription repressor activity

negative regulation of cell growth

identical protein binding

positive regulation of Notch signaling pathway

negative regulation of transcription, DNA-dependent

positive regulation of transcription, DNA-dependent

metal ion binding

protein homotetramerization

 
211221_at -0.344 4.365 -3.439 3.586e-03 0.250 -1.712 TADA3L transcriptional adaptor 3 (NGG1 homolog, yeast)-like 3 -9799811, -9796653 AL117487 3p25.3 Hs.386390 29

transcription factor activity

transcription coactivator activity

histone acetyltransferase activity

protein binding

intracellular

nucleus

regulation of transcription from RNA polymerase II promoter

STAGA complex

transcription factor TFTC complex

histone H3 acetylation

regulation of transcription

 
210246_s_at 0.477 5.357 3.438 3.595e-03 0.250 -1.715 ABCC8 ATP-binding cassette, sub-family C (CFTR/MRP), member 8 11 -17371007 AF087138 11p15.1 Hs.54470 111

nucleotide binding

receptor activity

ATP binding

plasma membrane

carbohydrate metabolic process

transport

potassium ion transport

sulfonylurea receptor activity

potassium ion transmembrane transporter activity

integral to membrane

ATPase activity

ATPase activity, coupled to transmembrane movement of substances

ABC transporters

Type II diabetes mellitus

209340_at -0.655 8.112 -3.438 3.599e-03 0.250 -1.716 UAP1 UDP-N-acteylglucosamine pyrophosphorylase 1 1 160797919 S73498 1q23.3 Hs.492859 10

UDP-N-acetylglucosamine diphosphorylase activity

nucleus

nucleolus

cytoplasm

UDP-N-acetylglucosamine biosynthetic process

metabolic process

transferase activity

nucleotidyltransferase activity

Amino sugar and nucleotide sugar metabolism

Metabolic pathways

221412_at 0.350 4.247 3.438 3.599e-03 0.250 -1.716 VN1R1 vomeronasal 1 receptor 1 19 -62658353 NM_020633 19q13.4 Hs.388810 Hs.677423 9

receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

biological_process

integral to membrane

pheromone receptor activity

response to pheromone

 
222479_s_at -0.391 8.021 -3.437 3.605e-03 0.250 -1.717 DYNC1LI1 dynein, cytoplasmic 1, light intermediate chain 1 3 -32542470 AK001081 3p22.3 Hs.529495 11

nucleotide binding

motor activity

ATP binding

microtubule

dynein complex

 
1560238_at 0.778 4.247 3.437 3.606e-03 0.250 -1.717 LOC100127980 hypothetical protein LOC100127980 19   BM926839 19q13.12 Hs.595153 1    
224580_at 0.381 4.144 3.432 3.643e-03 0.252 -1.727 SLC38A1 solute carrier family 38, member 1 12 -44863107 BF515894 12q13.11 Hs.694701 11

sodium:amino acid symporter activity

membrane fraction

plasma membrane

ion transport

sodium ion transport

glutamine transport

L-glutamine transmembrane transporter activity

symporter activity

integral to membrane

axon

sodium ion binding

 
225547_at -0.586 10.993 -3.432 3.645e-03 0.252 -1.727 SNHG6 small nucleolar RNA host gene 6 (non-protein coding) 8 -67996718 BG169443 8q13 Hs.372680 1    
223636_at 0.586 4.534 3.431 3.650e-03 0.252 -1.728 ZMYND12 zinc finger, MYND-type containing 12 1 -42668589 AL136858 1p34.2 Hs.294009 5

binding

intracellular

zinc ion binding

metal ion binding

 
1567014_s_at -0.473 5.957 -3.429 3.665e-03 0.252 -1.732 NFE2L2 nuclear factor (erythroid-derived 2)-like 2 2 -177803279, -177803278 AF323119 2q31 Hs.715540 141

transcription factor activity

nucleus

cytoplasm

cytosol

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

sequence-specific DNA binding

protein dimerization activity

 
224609_at 0.394 7.341 3.429 3.666e-03 0.252 -1.732 SLC44A2 solute carrier family 44, member 2 19 10574120, 10597170 AI264216 19p13.1 Hs.534560 13

signal transducer activity

transport

choline transmembrane transporter activity

choline transport

membrane

integral to membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

 
208690_s_at 0.795 10.641 3.428 3.673e-03 0.252 -1.734 PDLIM1 PDZ and LIM domain 1 10 -96987319 BC000915 10q22-q26.3 Hs.368525 19

transcription coactivator activity

protein binding

transcription factor complex

cytoplasm

cytoskeleton

response to oxidative stress

zinc ion binding

regulation of transcription

metal ion binding

 
203706_s_at -0.898 7.914 -3.428 3.675e-03 0.252 -1.735 FZD7 frizzled homolog 7 (Drosophila) 2 202607554 NM_003507 2q33 Hs.173859 23

non-G-protein coupled 7TM receptor activity

G-protein coupled receptor activity

plasma membrane

G-protein coupled receptor protein signaling pathway

multicellular organismal development

integral to membrane

Wnt receptor signaling pathway

Wnt receptor activity

Wnt signaling pathway

Melanogenesis

Pathways in cancer

Colorectal cancer

Basal cell carcinoma

212543_at 0.439 4.207 3.427 3.678e-03 0.252 -1.735 AIM1 absent in melanoma 1 6 107066422 U83115 6q21 Hs.643590 Hs.717199 12

molecular_function

sugar binding

cellular_component

biological_process

 
58696_at 0.402 7.082 3.426 3.684e-03 0.252 -1.737 EXOSC4 exosome component 4 8 145205509 AL039469 8q24.3 Hs.632041 16

3'-5'-exoribonuclease activity

exosome (RNase complex)

RNA binding

exonuclease activity

protein binding

nucleus

nucleolus

cytoplasm

rRNA processing

RNA processing

hydrolase activity

RNA degradation

1560741_at 0.770 7.458 3.426 3.685e-03 0.252 -1.737 SNRPN small nuclear ribonucleoprotein polypeptide N 15 22619886, 22652790, 22751227 AL832250 15q11.2 Hs.555970 Hs.564847 Hs.578619 Hs.585703 Hs.592473 Hs.621316 Hs.632166 47

RNA binding

nucleus

spliceosomal complex

RNA splicing

small nuclear ribonucleoprotein complex

identical protein binding

 
206142_at 0.475 2.842 3.421 3.724e-03 0.254 -1.746 ZNF135 zinc finger protein 135 19 63262423 NM_003436 19q13.4 Hs.85863 6

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
216733_s_at -1.314 8.037 -3.421 3.725e-03 0.254 -1.747 GATM glycine amidinotransferase (L-arginine:glycine amidinotransferase) 15 -43440613 X86401 15q21.1 Hs.75335 23

cytoplasm

mitochondrion

mitochondrial inner membrane

mitochondrial intermembrane space

creatine biosynthetic process

response to oxidative stress

response to nutrient

embryonic development

response to organic substance

glycine amidinotransferase activity

membrane

transferase activity

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines

tissue regeneration

response to peptide hormone stimulus

response to mercury ion

Glycine, serine and threonine metabolism

Arginine and proline metabolism

Metabolic pathways

223092_at -0.549 10.131 -3.420 3.733e-03 0.254 -1.748 ANKH ankylosis, progressive homolog (mouse) 5 -14757908 AA854943 5p15.1 Hs.156727 36

skeletal system development

inorganic phosphate transmembrane transporter activity

integral to plasma membrane

transport

phosphate transport

locomotory behavior

outer membrane

outer membrane

regulation of bone mineralization

regulation of bone mineralization

inorganic diphosphate transmembrane transporter activity

 
229500_at -0.500 4.475 -3.419 3.739e-03 0.254 -1.750 SLC30A9 solute carrier family 30 (zinc transporter), member 9 4 41687279 AI609256 4p13-p12 Hs.479634 6

nucleotide binding

transcription factor activity

nucleus

cytoskeleton

cation transport

zinc ion transport

biological_process

zinc ion binding

cation transmembrane transporter activity

membrane

integral to membrane

regulation of transcription

 
204160_s_at -0.644 7.255 -3.417 3.757e-03 0.255 -1.754 ENPP4 ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative function) 6 46205659 AW194947 6p21.1 Hs.643497 4

metabolic process

membrane

integral to membrane

hydrolase activity

 
226607_at -0.846 8.310 -3.416 3.763e-03 0.255 -1.756 C20orf194 chromosome 20 open reading frame 194 20 -3177947 AI498144 20p13 Hs.516853 7    
202811_at -0.381 8.074 -3.412 3.798e-03 0.256 -1.764 STAMBP STAM binding protein 2 73909593, 73909634, 73909654 NM_006463 2p13.1 Hs.469018 Hs.657598 28

ubiquitin thiolesterase activity

protein binding

nucleus

cytoplasm

early endosome

anti-apoptosis

JAK-STAT cascade

peptidase activity

metallopeptidase activity

zinc ion binding

positive regulation of cell proliferation

membrane

modification-dependent protein catabolic process

metal ion binding

Endocytosis

202931_x_at -0.448 10.850 -3.411 3.806e-03 0.256 -1.766 BIN1 bridging integrator 1 2 -127522077, -127522076 NM_004305 2q14 Hs.193163 69

protein binding

nucleus

cytoplasm

multicellular organismal development

cell proliferation

actin cytoskeleton

regulation of endocytosis

cell differentiation

interspecies interaction between organisms

 
201939_at 0.673 5.403 3.410 3.807e-03 0.256 -1.766 PLK2 polo-like kinase 2 (Drosophila) 5 -57785566 NM_006622 5q12.1-q13.2 Hs.398157 Hs.658132 20

nucleotide binding

mitotic cell cycle

protein serine/threonine kinase activity

signal transducer activity

protein binding

ATP binding

protein amino acid phosphorylation

transferase activity

polo kinase kinase activity

positive regulation of I-kappaB kinase/NF-kappaB cascade

 
220709_at 0.754 5.270 3.410 3.812e-03 0.256 -1.767 ZNF556 zinc finger protein 556 19 2818332 NM_024967 19p13.3 Hs.287433 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
207379_at -0.256 4.444 -3.410 3.815e-03 0.256 -1.768 EDIL3 EGF-like repeats and discoidin I-like domains 3 5 -83273881 NM_005711 5q14 Hs.482730 6

integrin binding

calcium ion binding

protein binding

extracellular region

cell adhesion

multicellular organismal development

positive regulation of cell-substrate adhesion

 
229958_at 0.565 6.777 3.403 3.863e-03 0.256 -1.779 CLN8 ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation) 8 1699276 W93695 8p23 Hs.127675 15

age-dependent response to oxidative stress

endoplasmic reticulum

ER-Golgi intermediate compartment

phospholipid metabolic process

lipid transport

mitochondrial membrane organization

lysosome organization

nervous system development

adult walking behavior

cholesterol metabolic process

associative learning

regulation of cell size

lipid biosynthetic process

membrane

integral to membrane

spinal cord motor neuron differentiation

social behavior

negative regulation of apoptosis

cellular protein catabolic process

cellular macromolecule catabolic process

photoreceptor cell maintenance

negative regulation of proteolysis

ceramide biosynthetic process

musculoskeletal movement

neuromuscular process controlling posture

neuromuscular process controlling balance

negative regulation of transferase activity

glutamate uptake during transmission of nerve impulse

retina development in camera-type eye

neurofilament cytoskeleton organization

 
211466_at 0.326 3.931 3.403 3.864e-03 0.256 -1.779 NFIB nuclear factor I/B 9 -14071846 U70862 9p24.1 Hs.644095 13

transcription factor activity

intracellular

nucleus

nucleolus

DNA replication

regulation of transcription, DNA-dependent

 
235212_at -0.294 3.275 -3.403 3.870e-03 0.256 -1.781 C14orf102 chromosome 14 open reading frame 102 14 -89814150 AA346979 14q32.11 Hs.528131 4

protein binding

 
224870_at 0.550 9.168 3.403 3.870e-03 0.256 -1.781 KIAA0114 KIAA0114 4 53273377 BG255416 4q12 Hs.17719 4    
204186_s_at -0.572 7.957 -3.402 3.873e-03 0.256 -1.782 PPID peptidylprolyl isomerase D 4 -159849728 AI014573 4q31.3 Hs.581725 25

peptidyl-prolyl cis-trans isomerase activity

cytoplasm

protein folding

cyclosporin A binding

isomerase activity

heat shock protein binding

Calcium signaling pathway

Parkinson's disease

Huntington's disease

219400_at 0.292 5.054 3.402 3.875e-03 0.256 -1.782 CNTNAP1 contactin associated protein 1 17 38088157 NM_003632 17q21 Hs.408730 10

receptor activity

SH3/SH2 adaptor activity

receptor binding

integral to plasma membrane

cell adhesion

signal transduction

membrane

SH3 domain binding

paranode region of axon

Cell adhesion molecules (CAMs)

226124_at 0.411 5.319 3.402 3.877e-03 0.256 -1.783 ZFP90 zinc finger protein 90 homolog (mouse) 16 67131161 AA747309 16q22.1 Hs.461074 Hs.709017 7

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
214681_at 0.238 4.794 3.401 3.879e-03 0.256 -1.783 GK glycerol kinase X 30581396 AI830490 Xp21.3 Hs.1466 20

nucleotide binding

glycerol kinase activity

glycerol kinase activity

ATP binding

cytoplasm

mitochondrion

mitochondrial outer membrane

cytosol

carbohydrate metabolic process

glycerol-3-phosphate metabolic process

membrane

transferase activity

Glycerolipid metabolism

Metabolic pathways

PPAR signaling pathway

218150_at -0.396 9.360 -3.401 3.880e-03 0.256 -1.783 ARL5A ADP-ribosylation factor-like 5A 2 -152365725 NM_012097 2q23.3 Hs.470233 6

nucleotide binding

GTP binding

intracellular

small GTPase mediated signal transduction

 
219256_s_at 0.411 4.260 3.399 3.897e-03 0.256 -1.787 SH3TC1 SH3 domain and tetratricopeptide repeats 1 4 8251959 NM_018986 4p16.1 Hs.479116 5

binding

cellular_component

biological_process

 
203555_at 0.251 6.307 3.399 3.898e-03 0.256 -1.787 PTPN18 protein tyrosine phosphatase, non-receptor type 18 (brain-derived) 2 130830049 NM_014369 2q21.1 Hs.516390 Hs.591549 16

non-membrane spanning protein tyrosine phosphatase activity

nucleus

cytoplasm

protein amino acid dephosphorylation

hydrolase activity

 
228765_at -0.570 8.877 -3.399 3.899e-03 0.256 -1.788 GTF2IRD2 GTF2I repeat domain containing 2 7 -73848419 BG032651 7q11.23 Hs.647017 Hs.647039 7

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

 
205603_s_at -0.942 6.759 -3.399 3.901e-03 0.256 -1.788 DIAPH2 diaphanous homolog 2 (Drosophila) X 95826317, 95826317 NM_007309 Xq21.33 Hs.226483 Hs.716101 14

cytokinesis

actin binding

receptor binding

cytoplasm

early endosome

Golgi apparatus

cytosol

multicellular organismal development

cellular component organization

Rho GTPase binding

actin cytoskeleton organization

cell differentiation

oogenesis

Regulation of actin cytoskeleton

226364_at 0.393 5.856 3.398 3.903e-03 0.256 -1.789 HIP1 huntingtin interacting protein 1 7 -75001344 AU145049 7q11.23 Hs.329266 Hs.619089 31

actin binding

structural constituent of cytoskeleton

membrane fraction

nucleus

cytoplasm

Golgi apparatus

cytoskeleton

endocytosis

induction of apoptosis

activation of caspase activity

cell death

membrane

cell differentiation

clathrin binding

clathrin coated vesicle membrane

cytoplasmic vesicle

phosphoinositide binding

regulation of apoptosis

regulation of transcription

positive regulation of receptor-mediated endocytosis

clathrin coat assembly

Huntington's disease

1568618_a_at -0.641 7.864 -3.398 3.905e-03 0.256 -1.789 GALNT1 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) 18 31488530 BC038440 18q12.1 Hs.514806 26

polypeptide N-acetylgalactosaminyltransferase activity

calcium ion binding

sugar binding

extracellular region

Golgi apparatus

membrane

integral to membrane

transferase activity, transferring glycosyl groups

protein amino acid O-linked glycosylation via serine

protein amino acid O-linked glycosylation via threonine

manganese ion binding

perinuclear region of cytoplasm

O-Glycan biosynthesis

Metabolic pathways

219827_at -1.107 8.156 -3.398 3.910e-03 0.256 -1.790 UCP3 uncoupling protein 3 (mitochondrial, proton carrier) 11 -73391459, -73388975 NM_003356 11q13 Hs.101337 Hs.621879 108

response to superoxide

response to hypoxia

transporter activity

binding

mitochondrion

mitochondrial inner membrane

lipid metabolic process

fatty acid metabolic process

transport

mitochondrial transport

respiratory gaseous exchange

proton transport

membrane

integral to membrane

oxidative phosphorylation uncoupler activity

 
225790_at -0.672 7.260 -3.397 3.912e-03 0.256 -1.791 MSRB3 methionine sulfoxide reductase B3 12 63958754 AL048386 12q14.3 Hs.339024 6

mitochondrion

endoplasmic reticulum

peptide-methionine-(S)-S-oxide reductase activity

zinc ion binding

oxidoreductase activity

metal ion binding

oxidation reduction

 
210164_at 0.459 4.117 3.396 3.921e-03 0.256 -1.793 GZMB granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1) 14 -24170003 J03189 14q11.2 Hs.1051 142

immunological synapse

serine-type endopeptidase activity

protein binding

nucleus

cytoplasm

cytosol

proteolysis

apoptosis

cleavage of lamin

peptidase activity

cytolysis

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

213374_x_at -0.394 8.400 -3.395 3.933e-03 0.257 -1.795 HIBCH 3-hydroxyisobutyryl-Coenzyme A hydrolase 2 -190777604 AW000964 2q32.2 Hs.656685 8

3-hydroxyisobutyryl-CoA hydrolase activity

protein binding

mitochondrion

metabolic process

branched chain family amino acid catabolic process

hydrolase activity

Valine, leucine and isoleucine degradation

beta-Alanine metabolism

Propanoate metabolism

Metabolic pathways

224565_at -0.685 10.792 -3.394 3.943e-03 0.257 -1.798 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 11 64946844, 64946844 BE675516 11q13.1 Hs.523789 Hs.648467 6    
205414_s_at 0.518 4.890 3.393 3.947e-03 0.257 -1.799 RICH2 Rho-type GTPase-activating protein RICH2 17 12633553 NM_014859 17p12 Hs.499758 7

GTPase activator activity

protein binding

intracellular

cytoplasm

signal transduction

 
221840_at 0.423 3.960 3.391 3.960e-03 0.258 -1.802 PTPRE protein tyrosine phosphatase, receptor type, E 10 129595314, 129735802 AA775177 10q26 Hs.127022 33

transmembrane receptor protein tyrosine phosphatase activity

protein binding

cytoplasm

plasma membrane

protein amino acid phosphorylation

protein amino acid dephosphorylation

integral to membrane

hydrolase activity

 
207349_s_at -1.155 8.615 -3.387 3.994e-03 0.259 -1.809 UCP3 uncoupling protein 3 (mitochondrial, proton carrier) 11 -73391459, -73388975 NM_022803 11q13 Hs.101337 Hs.621879 108

response to superoxide

response to hypoxia

transporter activity

binding

mitochondrion

mitochondrial inner membrane

lipid metabolic process

fatty acid metabolic process

transport

mitochondrial transport

respiratory gaseous exchange

proton transport

membrane

integral to membrane

oxidative phosphorylation uncoupler activity

 
204311_at 0.325 5.735 3.387 3.994e-03 0.259 -1.809 ATP1B2 ATPase, Na+/K+ transporting, beta 2 polypeptide 17 7494978 NM_001678 17p13.1 Hs.712542 22

sodium:potassium-exchanging ATPase activity

protein binding

ATP biosynthetic process

ion transport

potassium ion transport

sodium ion transport

membrane

integral to membrane

potassium ion binding

sodium ion binding

Cardiac muscle contraction

200895_s_at -0.482 8.114 -3.387 3.996e-03 0.259 -1.810 FKBP4 FK506 binding protein 4, 59kDa 12 2774368 NM_002014 12p13.33 Hs.524183 Hs.713721 47

peptidyl-prolyl cis-trans isomerase activity

ATP binding

GTP binding

FK506 binding

intracellular

nucleus

nucleolus

cytoplasm

protein folding

steroid hormone receptor complex assembly

copper ion transport

embryo implantation

isomerase activity

protein binding, bridging

heat shock protein binding

protein complex localization

glucocorticoid receptor binding

male sex differentiation

phosphoprotein binding

 
229246_at 0.459 6.236 3.385 4.012e-03 0.259 -1.813 FLJ44342 hypothetical LOC645460 17   AI803504 17q22 Hs.68714 Hs.710026 1    
215718_s_at -0.338 3.970 -3.385 4.014e-03 0.259 -1.814 PHF3 PHD finger protein 3 6 64414389 AI949220 6q12 Hs.348921 13

molecular_function

protein binding

cellular_component

nucleus

transcription

multicellular organismal development

zinc ion binding

metal ion binding

 
223451_s_at 0.525 6.374 3.384 4.022e-03 0.259 -1.816 CKLF chemokine-like factor 16 65143966, 65143972 AF096895 16q21 Hs.15159 Hs.710181 12

extracellular region

extracellular space

chemotaxis

chemokine activity

cell proliferation

membrane

integral to membrane

neutrophil chemotaxis

secretion by cell

macrophage chemotaxis

lymphocyte chemotaxis

 
200992_at -0.289 9.968 -3.381 4.048e-03 0.260 -1.821 IPO7 importin 7 11 9362744 AL137335 11p15.4 Hs.718440 22

protein import into nucleus, docking

small GTPase regulator activity

transporter activity

soluble fraction

nucleus

nuclear pore

cytoplasm

intracellular protein transport

signal transduction

Ran GTPase binding

protein transporter activity

histone binding

interspecies interaction between organisms

 
210219_at 0.327 3.704 3.380 4.057e-03 0.261 -1.823 SP100 SP100 nuclear antigen 2 230989114, 230989114 U36501 2q37.1 Hs.369056 34

negative regulation of transcription from RNA polymerase II promoter

DNA binding

transcription coactivator activity

transcription corepressor activity

nucleus

chromosome

DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator

PML body

kinase binding

protein domain specific binding

response to type I interferon

response to type I interferon

response to interferon-gamma

response to interferon-gamma

protein homodimerization activity

negative regulation of transcription factor activity

interspecies interaction between organisms

positive regulation of transcription, DNA-dependent

negative regulation of cell motion

interferon-gamma-mediated signaling pathway

type I interferon-mediated signaling pathway

 
1556839_s_at 0.539 4.206 3.378 4.072e-03 0.261 -1.827 SPTBN5 spectrin, beta, non-erythrocytic 5 15 -39927635 AA515490 15q21 Hs.709819 3

actin binding

cytoplasm

cytoskeleton

spectrin

membrane

actin cytoskeleton organization

actin filament capping

 
226907_at -1.024 7.905 -3.377 4.083e-03 0.261 -1.829 PPP1R14C protein phosphatase 1, regulatory (inhibitor) subunit 14C 6 150505880 N32557 6q24.3-q25.3 Hs.486798 10

protein serine/threonine phosphatase inhibitor activity

protein binding

cytoplasm

membrane

regulation of phosphorylation

 
207537_at -0.909 7.178 -3.373 4.110e-03 0.262 -1.835 PFKFB1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 X -54976314 NM_002625 Xp11.21 Hs.444304 11

nucleotide binding

6-phosphofructo-2-kinase activity

6-phosphofructo-2-kinase activity

fructose-2,6-bisphosphate 2-phosphatase activity

fructose-2,6-bisphosphate 2-phosphatase activity

ATP binding

cytosol

fructose 2,6-bisphosphate metabolic process

gluconeogenesis

glycolysis

protein kinase cascade

metabolic process

kinase activity

transferase activity

hydrolase activity

identical protein binding

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 complex

Fructose and mannose metabolism

223479_s_at 0.280 6.600 3.372 4.122e-03 0.262 -1.838 CHCHD5 coiled-coil-helix-coiled-coil-helix domain containing 5 2 113058506 BC004498 2q13 Hs.375707 3    
219667_s_at 0.259 2.368 3.370 4.137e-03 0.262 -1.841 BANK1 B-cell scaffold protein with ankyrin repeats 1 4 102930786, 102954005 NM_017935 4q24 Hs.480400 11

B cell activation

 
227404_s_at -2.050 5.795 -3.369 4.149e-03 0.262 -1.843 EGR1 early growth response 1 5 137829079 AI459194 5q31.1 Hs.326035 Hs.708393 174

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

learning or memory

zinc ion binding

transcription activator activity

T cell differentiation

positive regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

Prion diseases

228618_at 0.344 5.843 3.368 4.159e-03 0.262 -1.846 PEAR1 platelet endothelial aggregation receptor 1 1 155130146 AL040178 1q23.1 Hs.142003 Hs.715070 3

plasma membrane

integral to membrane

 
41858_at 0.334 6.059 3.368 4.160e-03 0.262 -1.846 PGAP2 post-GPI attachment to proteins 2 11 3775529, 3775624, 3775707, 3775765, 3785815, 3786341 AL049261 11p15.5 Hs.133968 5

Golgi membrane

endoplasmic reticulum

endoplasmic reticulum membrane

Golgi apparatus

GPI anchor biosynthetic process

protein transporter activity

membrane

integral to membrane

 
215667_x_at 0.375 5.992 3.367 4.161e-03 0.262 -1.846 PMS2L1 postmeiotic segregation increased 2-like 1 pseudogene 7 -99756198 AI375694 7q22.1 Hs.634244 Hs.661055 Hs.709266 7

molecular_function

ATP binding

cellular_component

mismatch repair

biological_process

kinase activity

transferase activity

mismatched DNA binding

 
227282_at 0.390 4.869 3.367 4.166e-03 0.262 -1.847 PCDH19 protocadherin 19 X -99433297 AB037734 Xq13.3 Hs.4993 12

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

 
235604_x_at 0.533 4.708 3.365 4.186e-03 0.263 -1.852 ZNF493 zinc finger protein 493 19 21371760, 21371760 AI758697 19p12 Hs.656558 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
1555516_at -0.511 3.965 -3.364 4.193e-03 0.263 -1.853 FOXP2 forkhead box P2 7 113842287 BC018016 7q31 Hs.656280 50

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

caudate nucleus development

putamen development

protein homodimerization activity

sequence-specific DNA binding

metal ion binding

 
204607_at 2.175 7.980 3.363 4.197e-03 0.263 -1.854 HMGCS2 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 (mitochondrial) 1 -120092525 NM_005518 1p13-p12 Hs.59889 13

hydroxymethylglutaryl-CoA synthase activity

hydroxymethylglutaryl-CoA synthase activity

mitochondrion

mitochondrial inner membrane

mitochondrial matrix

cholesterol biosynthetic process

response to nutrient

metabolic process

isoprenoid biosynthetic process

transferase activity

response to drug

response to peptide hormone stimulus

Synthesis and degradation of ketone bodies

Valine, leucine and isoleucine degradation

Butanoate metabolism

Terpenoid backbone biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

PPAR signaling pathway

209824_s_at 0.985 6.368 3.363 4.200e-03 0.263 -1.854 ARNTL aryl hydrocarbon receptor nuclear translocator-like 11 13255900 AB000812 11p15 Hs.65734 37

transcription factor activity

signal transducer activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

signal transduction

circadian rhythm

aryl hydrocarbon receptor binding

positive regulation of transcription from RNA polymerase II promoter

Hsp90 protein binding

Circadian rhythm - mammal

226206_at -0.486 8.209 -3.363 4.202e-03 0.263 -1.855 MAFK v-maf musculoaponeurotic fibrosarcoma oncogene homolog K (avian) 7 1536893 BG231691 7p22.3 Hs.520612 14

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

nervous system development

sequence-specific DNA binding

 
202322_s_at -0.358 8.013 -3.360 4.229e-03 0.263 -1.861 GGPS1 geranylgeranyl diphosphate synthase 1 1 233558375, 233558491 NM_004837 1q43 Hs.719270 13

dimethylallyltranstransferase activity

farnesyltranstransferase activity

geranyltranstransferase activity

soluble fraction

cytoplasm

isoprenoid biosynthetic process

transferase activity

Terpenoid backbone biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

200731_s_at -0.609 9.773 -3.359 4.233e-03 0.263 -1.862 PTP4A1 protein tyrosine phosphatase type IVA, member 1 6 64339878 AW165960 6q12 Hs.227777 Hs.706850 28

protein tyrosine phosphatase activity

cytoplasm

early endosome

endoplasmic reticulum

spindle

plasma membrane

protein amino acid dephosphorylation

cell cycle

multicellular organismal development

hydrolase activity

 
214757_at 0.308 3.961 3.359 4.234e-03 0.263 -1.862 PMS2L2 postmeiotic segregation increased 2-like 2 pseudogene 7 -74815899, 72114615 BG178274 7q11-q22 Hs.292996 Hs.661055 Hs.675888 4

molecular_function

ATP binding

cellular_component

mismatch repair

biological_process

mismatched DNA binding

 
211597_s_at 0.475 7.451 3.359 4.235e-03 0.263 -1.862 HOPX HOP homeobox 4 -57208910, -57208910 AB059408 4q11-q12 Hs.654864 25

negative regulation of transcription from RNA polymerase II promoter

trophectodermal cell differentiation

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

heart development

regulation of heart contraction

transcription repressor activity

histone deacetylation

positive regulation of skeletal muscle regeneration

sequence-specific DNA binding

negative regulation of cell differentiation

lung alveolus development

positive regulation of striated muscle cell differentiation

 
213625_at 0.293 4.722 3.357 4.250e-03 0.264 -1.865 ZKSCAN4 zinc finger with KRAB and SCAN domains 4 6 -28320468 AW190088 6p21.33-p21.31 Hs.44720 6

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
200730_s_at -0.998 8.533 -3.357 4.253e-03 0.264 -1.866 PTP4A1 protein tyrosine phosphatase type IVA, member 1 6 64339878 BF576710 6q12 Hs.227777 Hs.706850 28

protein tyrosine phosphatase activity

cytoplasm

early endosome

endoplasmic reticulum

spindle

plasma membrane

protein amino acid dephosphorylation

cell cycle

multicellular organismal development

hydrolase activity

 
203700_s_at 0.494 4.945 3.355 4.266e-03 0.264 -1.868 DIO2 deiodinase, iodothyronine, type II 14 -79733621, -79733621 NM_013989 14q24.2-q24.3 Hs.202354 61

selenocysteine incorporation

thyroxine 5'-deiodinase activity

thyroid hormone generation

selenium binding

membrane

integral to membrane

thyroid hormone catabolic process

hormone biosynthetic process

oxidation reduction

 
218843_at 0.602 6.142 3.354 4.279e-03 0.265 -1.871 FNDC4 fibronectin type III domain containing 4 2 -27568254 NM_022823 2p23.3 Hs.27836 Hs.718524 6

membrane

integral to membrane

 
218966_at 0.503 6.083 3.353 4.291e-03 0.265 -1.874 MYO5C myosin VC 15 -50271811 NM_018728 15q21 Hs.487036 6

nucleotide binding

motor activity

calmodulin binding

ATP binding

myosin complex

actin filament binding

 
226083_at -0.875 7.027 -3.352 4.294e-03 0.265 -1.874 TMEM70 transmembrane protein 70 8 75050983 AA886902 8q21.11 Hs.106650 7

molecular_function

mitochondrion

membrane

integral to membrane

integral to mitochondrial membrane

mitochondrial proton-transporting ATP synthase complex assembly

 
229344_x_at 0.480 5.761 3.349 4.324e-03 0.266 -1.881 RIMKLB ribosomal modification protein rimK-like family member B 12 8741784 AW135012 12p13.31 Hs.504670 4

nucleotide binding

catalytic activity

ATP binding

protein modification process

manganese ion binding

metal ion binding

 
1557347_at 0.228 5.498 3.348 4.332e-03 0.266 -1.882 MCPH1 microcephalin 1 8 6251528 N21605 8p23.1 Hs.709634 32

intracellular

centrosome

 
214364_at 0.325 6.133 3.348 4.332e-03 0.266 -1.882 MTERFD2 MTERF domain containing 2 2 -241683654, -241675182 W84525 2q37.3 Hs.159556 5    
236953_s_at 0.494 4.246 3.348 4.332e-03 0.266 -1.882 NHLRC3 NHL repeat containing 3 13 38510454 N25548 13q13.3 Hs.507783 1

extracellular region

 
91684_g_at 0.407 6.190 3.346 4.351e-03 0.266 -1.886 EXOSC4 exosome component 4 8 145205509 AI571298 8q24.3 Hs.632041 16

3'-5'-exoribonuclease activity

exosome (RNase complex)

RNA binding

exonuclease activity

protein binding

nucleus

nucleolus

cytoplasm

rRNA processing

RNA processing

hydrolase activity

RNA degradation

225326_at -0.331 7.474 -3.345 4.356e-03 0.266 -1.887 RBM27 RNA binding motif protein 27 5 145563355 AB037732 5q32 Hs.61441 8

nucleotide binding

RNA binding

nucleus

cytoplasm

zinc ion binding

nuclear speck

metal ion binding

 
222916_s_at -0.407 5.661 -3.344 4.367e-03 0.266 -1.890 HDLBP high density lipoprotein binding protein 2 -241815351, -241815351 AF116718 2q37.3 Hs.471851 25

RNA binding

protein binding

nucleus

cytoplasm

plasma membrane

lipid metabolic process

lipid transport

steroid metabolic process

cholesterol metabolic process

lipid binding

high-density lipoprotein particle

 
205251_at -1.140 7.774 -3.344 4.367e-03 0.266 -1.890 PER2 period homolog 2 (Drosophila) 2 -238817417 NM_022817 2q37.3 Hs.58756 46

signal transducer activity

protein binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

signal transduction

circadian rhythm

Circadian rhythm - mammal

213534_s_at 0.265 3.553 3.340 4.401e-03 0.268 -1.896 PASK PAS domain containing serine/threonine kinase 2 -241694187 D50925 2q37.3 Hs.397891 16

nucleotide binding

protein serine/threonine kinase activity

signal transducer activity

ATP binding

cytoplasm

Golgi apparatus

regulation of transcription, DNA-dependent

protein amino acid phosphorylation

signal transduction

transferase activity

identical protein binding

 
238952_x_at 0.271 3.760 3.336 4.443e-03 0.270 -1.905 ZNF829 zinc finger protein 829 19 -42074092 BF439163 19q13.12 Hs.124047 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
235729_at 0.666 5.930 3.333 4.467e-03 0.271 -1.910 ZNF514 zinc finger protein 514 2 -95177126 T93113 2q11.1 Hs.655109 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
222736_s_at -0.539 6.886 -3.331 4.482e-03 0.271 -1.913 TMEM38B transmembrane protein 38B 9 107496645 BC000049 9q31.2 Hs.411925 5

potassium channel activity

endoplasmic reticulum

ion transport

potassium ion transport

membrane

integral to membrane

potassium ion binding

nuclear membrane

sarcoplasmic reticulum membrane

 
223267_at -0.360 7.695 -3.331 4.488e-03 0.271 -1.914 RG9MTD1 RNA (guanine-9-) methyltransferase domain containing 1 3 102763401 AF226052 3q12.3 Hs.643184 Hs.715724 3

protein binding

mitochondrion

tRNA processing

methyltransferase activity

transferase activity

 
241198_s_at 0.235 2.629 3.330 4.495e-03 0.271 -1.916 C11orf70 chromosome 11 open reading frame 70 11 101423408 BE645435 11q22.1 Hs.98328 3    
240728_at 0.276 4.796 3.330 4.496e-03 0.271 -1.916 PLCB4 phospholipase C, beta 4 20 9024931 AI224105 20p12 Hs.472101 17

phosphoinositide phospholipase C activity

signal transducer activity

calcium ion binding

protein binding

intracellular signaling cascade

lipid catabolic process

hydrolase activity

Inositol phosphate metabolism

Metabolic pathways

Calcium signaling pathway

Chemokine signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Wnt signaling pathway

Gap junction

Long-term potentiation

Long-term depression

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Huntington's disease

1554452_a_at 0.393 5.420 3.330 4.496e-03 0.271 -1.916 C7orf68 chromosome 7 open reading frame 68 7 127883119 BC001863 7q32.1 Hs.710088 9

molecular_function

cellular_component

response to stress

membrane

integral to membrane

 
1555950_a_at -0.603 7.589 -3.330 4.497e-03 0.271 -1.916 CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 1 205561439 CA448665 1q32 Hs.126517 118

soluble fraction

plasma membrane

integral to plasma membrane

complement activation, classical pathway

elevation of cytosolic calcium ion concentration

anchored to membrane

innate immune response

membrane raft

respiratory burst

Complement and coagulation cascades

Hematopoietic cell lineage

232874_at 0.591 4.632 3.326 4.532e-03 0.272 -1.923 DOCK9 dedicator of cytokinesis 9 13 -98310435, -98310435, -98243741, -98243741 AU146550 13q32.3 Hs.596105 15

guanyl-nucleotide exchange factor activity

GTP binding

cellular_component

biological_process

membrane

GTPase binding

 
203178_at -1.120 8.782 -3.326 4.533e-03 0.272 -1.923 GATM glycine amidinotransferase (L-arginine:glycine amidinotransferase) 15 -43440613 NM_001482 15q21.1 Hs.75335 23

cytoplasm

mitochondrion

mitochondrial inner membrane

mitochondrial intermembrane space

creatine biosynthetic process

response to oxidative stress

response to nutrient

embryonic development

response to organic substance

glycine amidinotransferase activity

membrane

transferase activity

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines

tissue regeneration

response to peptide hormone stimulus

response to mercury ion

Glycine, serine and threonine metabolism

Arginine and proline metabolism

Metabolic pathways

205334_at 0.547 8.764 3.326 4.534e-03 0.272 -1.923 S100A1 S100 calcium binding protein A1 1 151867496 NM_006271 1q21 Hs.515715 55

calcium ion binding

cytoplasm

intracellular signaling cascade

regulation of heart contraction

zinc ion binding

sarcoplasmic reticulum

protein homodimerization activity

protein complex

S100 beta binding

S100 alpha binding

ATPase binding

 
226284_at -0.593 5.152 -3.324 4.551e-03 0.273 -1.927 ZBTB2 zinc finger and BTB domain containing 2 6 -151726942 BF111616 6q25.1 Hs.520073 6

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
219290_x_at 0.339 4.887 3.322 4.566e-03 0.274 -1.930 DAPP1 dual adaptor of phosphotyrosine and 3-phosphoinositides 4 100957003 NM_014395 4q25-q27 Hs.436271 Hs.708484 15

protein tyrosine phosphatase activity

protein binding

phospholipid binding

cellular_component

cytoplasm

protein amino acid dephosphorylation

signal transduction

membrane

B cell receptor signaling pathway

200958_s_at -0.342 9.015 -3.320 4.585e-03 0.274 -1.933 SDCBP syndecan binding protein (syntenin) 8 59628281 NM_005625 8q12 Hs.200804 39

interleukin-5 receptor binding

nucleus

cytoplasm

endoplasmic reticulum

cytosol

cytoskeleton

plasma membrane

interleukin-5 receptor complex

adherens junction

focal adhesion

protein targeting to membrane

substrate-bound cell migration, cell extension

intracellular signaling cascade

Ras protein signal transduction

synaptic transmission

cytoskeletal adaptor activity

actin cytoskeleton organization

cell junction

melanosome

syndecan binding

protein heterodimerization activity

protein N-terminus binding

 
219656_at 0.294 6.482 3.320 4.587e-03 0.274 -1.934 PCDH12 protocadherin 12 5 -141304713 NM_016580 5q31 Hs.439474 10

calcium ion binding

protein binding

plasma membrane

integral to plasma membrane

cell-cell junction

cell adhesion

homophilic cell adhesion

neuron recognition

calcium-dependent cell-cell adhesion

 
225733_at 0.292 5.786 3.318 4.612e-03 0.275 -1.939 B3GALT6 UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6 1 1157491 AI890557 1p36.33 Hs.284284 4

Golgi apparatus

Golgi medial cisterna

glycosaminoglycan biosynthetic process

protein amino acid glycosylation

UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity

membrane

integral to membrane

transferase activity, transferring glycosyl groups

manganese ion binding

galactosylxylosylprotein 3-beta-galactosyltransferase activity

Chondroitin sulfate biosynthesis

Heparan sulfate biosynthesis

Metabolic pathways

226313_at 0.339 4.719 3.316 4.626e-03 0.275 -1.941 C10orf35 chromosome 10 open reading frame 35 10 71060008 H49529 10q22.1 Hs.522992 5

protein binding

membrane

integral to membrane

 
218411_s_at 0.371 5.395 3.316 4.628e-03 0.275 -1.942 MBIP MAP3K12 binding inhibitory protein 1 14 -35837514 NM_016586 14q13.3 Hs.368647 8

inactivation of MAPK activity involved in osmosensory signaling pathway

protein kinase inhibitor activity

nucleus

nucleolus

cytoplasm

identical protein binding

 
212899_at 0.389 5.634 3.312 4.664e-03 0.276 -1.949 CDC2L6 cell division cycle 2-like 6 (CDK8-like) 6 -111037873 AB028951 6q21 Hs.719138 10

nucleotide binding

cyclin-dependent protein kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

transferase activity

 
222116_s_at 0.453 5.189 3.311 4.674e-03 0.276 -1.951 TBC1D16 TBC1 domain family, member 16 17 -75528413 AL157485 17q25.3 Hs.369819 4

GTPase activator activity

Rab GTPase activator activity

intracellular

regulation of Rab GTPase activity

 
1569986_x_at -0.961 11.920 -3.310 4.680e-03 0.276 -1.952 TNNT3 troponin T type 3 (skeletal, fast) 11 1897374 BF789882 11p15.5 Hs.73454 21

skeletal muscle contraction

actin binding

tropomyosin binding

tropomyosin binding

troponin complex

regulation of striated muscle contraction

troponin C binding

calcium-dependent ATPase activity

troponin I binding

regulation of ATPase activity

calcium-dependent protein binding

 
244741_s_at 1.118 6.388 3.310 4.688e-03 0.276 -1.953 MGC9913 hypothetical protein MGC9913 19   BE855713 19q13.43 Hs.23133 1    
213795_s_at 0.310 4.724 3.309 4.692e-03 0.276 -1.954 PTPRA protein tyrosine phosphatase, receptor type, A 20 2792840, 2802141, 2851852 AL121905 20p13 Hs.269577 58

transmembrane receptor protein tyrosine phosphatase activity

integral to plasma membrane

protein amino acid phosphorylation

protein amino acid dephosphorylation

membrane

hydrolase activity

 
205981_s_at -0.748 6.685 -3.308 4.707e-03 0.277 -1.957 ING2 inhibitor of growth family, member 2 4 184663213 NM_001564 4q35.1 Hs.107153 27

DNA binding

chromatin binding

protein binding

nucleus

regulation of transcription, DNA-dependent

signal transduction

zinc ion binding

transcription activator activity

chromatin modification

Sin3 complex

CCAAT-binding factor complex

regulation of growth

positive regulation of transcription

metal ion binding

 
209244_s_at -0.273 8.255 -3.307 4.714e-03 0.277 -1.958 KIF1C kinesin family member 1C 17 4841999 BE885926 17p13.2 Hs.435120 8

nucleotide binding

microtubule motor activity

ATP binding

endoplasmic reticulum

Golgi apparatus

microtubule

retrograde vesicle-mediated transport, Golgi to ER

microtubule-based movement

 
210275_s_at -0.660 10.431 -3.307 4.715e-03 0.277 -1.958 ZFAND5 zinc finger, AN1-type domain 5 9 -74156160 AF062347 9q13-q21 Hs.406096 6

in utero embryonic development

vasculature development

respiratory system process

molecular_function

DNA binding

cellular_component

biological_process

zinc ion binding

fibroblast migration

metal ion binding

platelet-derived growth factor receptor signaling pathway

skeletal system morphogenesis

smooth muscle tissue development

face development

 
223583_at 0.357 5.061 3.306 4.727e-03 0.277 -1.961 TNFAIP8L2 tumor necrosis factor, alpha-induced protein 8-like 2 1 149395728 AF271774 1q21.3 Hs.709522 2

protein binding

innate immune response

 
213812_s_at 0.511 7.145 3.305 4.733e-03 0.277 -1.962 CAMKK2 calcium/calmodulin-dependent protein kinase kinase 2, beta 12 -120165773, -120159877, -120159877 AK024748 12q24.2 Hs.297343 18

MAPKKK cascade

nucleotide binding

calmodulin-dependent protein kinase activity

protein tyrosine kinase activity

calcium ion binding

calmodulin binding

ATP binding

intracellular

cytoplasm

transferase activity

calcium-mediated signaling

regulation of protein kinase activity

positive regulation of transcription

protein amino acid autophosphorylation

Adipocytokine signaling pathway

201380_at -0.384 5.827 -3.305 4.736e-03 0.277 -1.962 CRTAP cartilage associated protein 3 33130453 NM_006371 3p22.3 Hs.719160 10

extracellular region

proteinaceous extracellular matrix

 
238592_at -1.188 8.949 -3.303 4.753e-03 0.277 -1.966 PDLIM3 PDZ and LIM domain 3 4 -186659844 BE840636 4q35 Hs.85862 12

nucleus

nucleolus

cytoplasm

actin filament organization

heart development

cytoskeletal protein binding

zinc ion binding

structural constituent of muscle

actin cytoskeleton

Z disc

metal ion binding

 
224666_at 0.324 7.798 3.302 4.758e-03 0.277 -1.967 NSMCE1 non-SMC element 1 homolog (S. cerevisiae) 16 -27143815 AF161451 16p12.1 Hs.284295 6

nucleus

DNA repair

DNA recombination

response to DNA damage stimulus

zinc ion binding

metal ion binding

 
222617_s_at -0.532 7.394 -3.302 4.759e-03 0.277 -1.967 C10orf84 chromosome 10 open reading frame 84 10 -120058561 AI147026 10q26.11 Hs.372309 5    
213001_at -0.687 7.322 -3.302 4.763e-03 0.277 -1.967 ANGPTL2 angiopoietin-like 2 9 -128889448 AF007150 9q34 Hs.653262 11

receptor binding

extracellular region

extracellular space

signal transduction

multicellular organismal development

 
232063_x_at 0.416 4.132 3.302 4.766e-03 0.277 -1.968 FARSB phenylalanyl-tRNA synthetase, beta subunit 2 -223144405 AW024617 2q36.1 Hs.471452 14

nucleotide binding

magnesium ion binding

RNA binding

phenylalanine-tRNA ligase activity

ATP binding

soluble fraction

cytoplasm

translation

phenylalanyl-tRNA aminoacylation

ligase activity

Aminoacyl-tRNA biosynthesis

201298_s_at -0.338 7.583 -3.301 4.776e-03 0.277 -1.970 MOBKL1B MOB1, Mps One Binder kinase activator-like 1B (yeast) 2 -74236718 BC003398 2p13.1 Hs.196437 12

protein binding

zinc ion binding

metal ion binding

 
227406_at 0.466 6.757 3.300 4.783e-03 0.277 -1.971 LOC100129387 hypothetical LOC100129387 15 48433662 AI286203 15q21.2 Hs.659360 1    
201520_s_at -0.544 9.375 -3.299 4.788e-03 0.277 -1.972 GRSF1 G-rich RNA sequence binding factor 1 4 -71900362, -71900362 BF034561 4q13 Hs.309763 6

mRNA binding

cytoplasm

mRNA polyadenylation

 
219441_s_at 0.389 5.096 3.299 4.796e-03 0.277 -1.974 LRRK1 leucine-rich repeat kinase 1 15 99276982 NM_024652 15q26.3 Hs.407918 16

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

GTP binding

intracellular

cytoplasm

protein amino acid phosphorylation

small GTPase mediated signal transduction

transferase activity

manganese ion binding

 
218735_s_at 0.679 5.646 3.298 4.797e-03 0.277 -1.974 ZNF544 zinc finger protein 544 19 63431881 AA349848 19q13.43 Hs.438994 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
220650_s_at 0.286 5.813 3.298 4.800e-03 0.277 -1.975 SLC9A5 solute carrier family 9 (sodium/hydrogen exchanger), member 5 16 65840355 NM_004594 16q22.1 Hs.439650 11

cation transport

sodium ion transport

regulation of pH

antiporter activity

solute:hydrogen antiporter activity

sodium:hydrogen antiporter activity

membrane

integral to membrane

sodium ion binding

 
214265_at 0.373 5.193 3.297 4.812e-03 0.277 -1.977 ITGA8 integrin, alpha 8 10 -15599093 AI193623 10p13 Hs.171311 15

metanephros development

receptor activity

calcium ion binding

protein binding

cell-matrix adhesion

integrin-mediated signaling pathway

multicellular organismal development

nervous system development

memory

integrin complex

membrane

integral to membrane

cell-cell adhesion

cell projection organization

cell differentiation

extracellular matrix organization

positive regulation of transforming growth factor beta receptor signaling pathway

inner ear morphogenesis

apical part of cell

Focal adhesion

ECM-receptor interaction

Cell adhesion molecules (CAMs)

Regulation of actin cytoskeleton

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

226676_at 0.397 4.388 3.293 4.850e-03 0.279 -1.984 ZNF521 zinc finger protein 521 18 -20895885 AK021452 18q11.2 Hs.116935 9    
212188_at 0.745 7.397 3.292 4.860e-03 0.279 -1.986 KCTD12 potassium channel tetramerisation domain containing 12 13 -76352304 AA551075 13q22.3 Hs.644125 14

voltage-gated potassium channel activity

protein binding

potassium ion transport

voltage-gated potassium channel complex

membrane

 
218706_s_at 0.682 5.188 3.289 4.888e-03 0.280 -1.991 GRAMD3 GRAM domain containing 3 5 125723686, 125786767, 125828685 AW575493 5q23.2 Hs.363558 6    
232011_s_at 0.411 6.301 3.289 4.895e-03 0.280 -1.992 MAP1LC3A microtubule-associated protein 1 light chain 3 alpha 20 32598352, 32610179 AL118520 20cen-q13 Hs.632273 29

autophagic vacuole formation

protein binding

cytoplasm

autophagic vacuole

cytosol

microtubule

autophagy

phosphatidylethanolamine binding

modification-dependent protein catabolic process

organelle membrane

cytoplasmic vesicle

 
228155_at 0.812 9.301 3.287 4.913e-03 0.280 -1.995 C10orf58 chromosome 10 open reading frame 58 10 82158221, 82163570 BF512388 10q23.1 Hs.500333 Hs.718589 10

extracellular region

 
235122_at 0.513 4.554 3.286 4.920e-03 0.280 -1.997 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 1 -41748270 AI800713 1p34 Hs.648369 Hs.715958 12

DNA binding

intracellular

nucleus

cytoplasm

zinc ion binding

transcription activator activity

positive regulation of transcription

metal ion binding

 
227631_at 0.340 4.612 3.285 4.928e-03 0.280 -1.998 ABI2 abl-interactor 2 2 203901247 BF058849 2q33 Hs.471156 22

DNA binding

SH3/SH2 adaptor activity

cytoplasm

cytoplasm

cytosol

cytoskeleton

cell motion

cytoskeleton organization

cytoskeletal adaptor activity

actin polymerization or depolymerization

cell migration

SH3 domain binding

peptidyl-tyrosine phosphorylation

kinase binding

lamellipodium

filopodium

Regulation of actin cytoskeleton

205830_at 1.379 4.555 3.284 4.939e-03 0.280 -2.000 CLGN calmegin 4 -141529056 NM_004362 4q28.3-q31.1 Hs.86368 11

calcium ion binding

endoplasmic reticulum

protein folding

single fertilization

membrane

integral to membrane

unfolded protein binding

 
202845_s_at -0.368 7.788 -3.283 4.950e-03 0.281 -2.002 RALBP1 ralA binding protein 1 18 9465529 NM_006788 18p11.3 Hs.528993 Hs.719181 42

GTPase activator activity

protein binding

intracellular

transport

chemotaxis

signal transduction

small GTPase mediated signal transduction

membrane

ATPase activity

Ral GTPase binding

Rac GTPase activator activity

regulation of GTPase activity

positive regulation of Cdc42 GTPase activity

ATPase activity, coupled to movement of substances

Rac GTPase binding

Pathways in cancer

Pancreatic cancer

201832_s_at -0.421 9.929 -3.282 4.968e-03 0.281 -2.005 USO1 USO1 homolog, vesicle docking protein (yeast) 4 76868852 NM_003715 4q21.1 Hs.292689 34

Golgi membrane

protein binding

cytoplasm

microsome

Golgi apparatus

cytosol

intracellular protein transport

protein transporter activity

membrane

vesicle-mediated transport

vesicle fusion with Golgi apparatus

perinuclear region of cytoplasm

 
217591_at -0.655 5.835 -3.280 4.981e-03 0.281 -2.008 SKIL SKI-like oncogene 3 171558166, 171560104 BF725121 3q26 Hs.581632 34

nucleotide binding

transcription corepressor activity

transforming growth factor beta receptor, cytoplasmic mediator activity

protein binding

nucleus

transcription from RNA polymerase II promoter

signal transduction

multicellular organismal development

 
232473_at 0.405 4.405 3.277 5.012e-03 0.282 -2.013 PRPF18 PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae) 10 13668944 AU144329 10p13 Hs.161181 6

nucleus

spliceosomal complex

mRNA processing

RNA splicing

nuclear speck

 
1556049_at 0.882 6.283 3.276 5.024e-03 0.282 -2.016 RTN4 reticulon 4 2 -55052830, -55052830, -55052830 CA428769 2p16.3 Hs.704007 73

protein binding

nuclear envelope

endoplasmic reticulum

membrane

integral to membrane

negative regulation of anti-apoptosis

integral to endoplasmic reticulum membrane

regulation of cell migration

negative regulation of axon extension

regulation of apoptosis

 
235082_at -0.499 4.866 -3.275 5.037e-03 0.282 -2.018 PCNX pecanex homolog (Drosophila) 14 70443874 BG024649 14q24.2 Hs.446559 10

membrane

integral to membrane

 
241233_x_at 0.272 7.465 3.275 5.037e-03 0.282 -2.018 C21orf81 ankyrin repeat domain 20 family, member A3 pseudogene 21 -14237966 AI978581 21q11.2 Hs.364456 2    
210867_at -0.408 5.238 -3.275 5.040e-03 0.282 -2.018 CNOT4 CCR4-NOT transcription complex, subunit 4 7 -134723303, -134697088 AF180475 7q22-qter Hs.490224 7

nucleotide binding

RNA binding

protein binding

nucleus

cytoplasm

zinc ion binding

ligase activity

modification-dependent protein catabolic process

regulation of transcription

metal ion binding

RNA degradation

202077_at 0.308 12.059 3.273 5.058e-03 0.283 -2.022 NDUFAB1 NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa 16 -23499835 NM_005003 16p12.2 Hs.189716 14

acyl carrier activity

fatty acid binding

calcium ion binding

mitochondrion

mitochondrial respiratory chain complex I

mitochondrial respiratory chain complex I

mitochondrial matrix

mitochondrial electron transport, NADH to ubiquinone

fatty acid biosynthetic process

transport

NADH dehydrogenase (ubiquinone) activity

electron transport chain

phosphopantetheine binding

mitochondrial membrane

mitochondrial membrane

cofactor binding

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

215734_at 0.373 4.771 3.272 5.067e-03 0.283 -2.023 C19orf36 chromosome 19 open reading frame 36 19 2047867 AW182303 19p13.3 Hs.424049 3

extracellular region

 
1569076_a_at 0.360 3.324 3.271 5.073e-03 0.283 -2.024 ZNF836 zinc finger protein 836 19 -57349936 BE791720 19q13.41 Hs.631584 1

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
231567_s_at 0.266 5.634 3.270 5.088e-03 0.284 -2.027 CCDC62 coiled-coil domain containing 62 12 121825025 AI027946 12q24.31 Hs.592008 6    
214039_s_at -0.636 11.019 -3.269 5.097e-03 0.284 -2.028 LAPTM4B lysosomal protein transmembrane 4 beta 8 98856984 T15777 8q22.1 Hs.492314 17

transport

endomembrane system

membrane

integral to membrane

Lysosome

213820_s_at 0.251 4.770 3.269 5.097e-03 0.284 -2.028 STARD5 StAR-related lipid transfer (START) domain containing 5 15 -79392061 T54159 15q26 Hs.513075 12

cytosol

steroid biosynthetic process

lipid transport

lipid binding

 
221221_s_at 0.398 6.145 3.269 5.100e-03 0.284 -2.029 KLHL3 kelch-like 3 (Drosophila) 5 -136981087 NM_017415 5q31 Hs.655084 8

actin binding

structural molecule activity

protein binding

cytoplasm

cytoskeleton

modification-dependent protein catabolic process

 
224857_s_at -0.347 7.320 -3.266 5.133e-03 0.284 -2.035 POLR1D polymerase (RNA) I polypeptide D, 16kDa 13 27094002, 27094028 BE378670 13q12.2 Hs.507584 15

DNA binding

DNA-directed RNA polymerase activity

nucleus

nucleoplasm

transcription

protein dimerization activity

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

239517_at 0.733 6.000 3.265 5.138e-03 0.284 -2.036 ITGB6 integrin, beta 6 2 -160666478 AA609987 2q24.2 Hs.470399 44

receptor activity

protein binding

cell adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

integrin complex

membrane

integral to membrane

interspecies interaction between organisms

Focal adhesion

ECM-receptor interaction

Regulation of actin cytoskeleton

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

65630_at 0.393 6.360 3.265 5.141e-03 0.284 -2.036 TMEM80 transmembrane protein 80 11 685615 AI742455 11p15.5 Hs.448664 2

membrane

integral to membrane

 
232284_at 0.450 4.777 3.265 5.145e-03 0.284 -2.037 PSMD6 proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 3 -63971270 AI206345 3p14.1 Hs.152536 35

proteasome complex

protein binding

cytosol

proteolysis

ATPase activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

211086_x_at 0.238 3.870 3.264 5.145e-03 0.284 -2.037 NEK1 NIMA (never in mitosis gene a)-related kinase 1 4 -170551003 Z25431 4q33 Hs.481181 11

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

cell cycle

mitosis

transferase activity

cell division

 
222154_s_at -0.497 9.172 -3.264 5.151e-03 0.284 -2.038 SPATS2L spermatogenesis associated, serine-rich 2-like 2 200878848, 200879229, 200879600 AK002064 2q33.1 Hs.120323 9    
218264_at -0.286 7.406 -3.262 5.172e-03 0.285 -2.042 BCCIP BRCA2 and CDKN1A interacting protein 10 127502093, 127502093, 127502093 NM_016567 10q26.1 Hs.370292 Hs.715543 31

regulation of cyclin-dependent protein kinase activity

protein binding

nucleus

DNA repair

response to DNA damage stimulus

cell cycle

 
218710_at -0.322 6.208 -3.260 5.193e-03 0.285 -2.045 TTC27 tetratricopeptide repeat domain 27 2 32706632 NM_017735 2p22.3 Hs.468125 6

protein binding

cellular_component

biological_process

 
57588_at -1.064 8.282 -3.259 5.203e-03 0.285 -2.047 SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 20 19141289 R62432 20p13 Hs.654790 2

calcium ion binding

ion transport

potassium ion transport

sodium ion transport

calcium ion transport

calcium, potassium:sodium antiporter activity

symporter activity

antiporter activity

membrane

integral to membrane

potassium ion binding

sodium ion binding

 
238840_at 0.575 5.145 3.259 5.203e-03 0.285 -2.047 LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 2 238200962, 238265545, 238265545 AW082668 2q37.3 Hs.471779 16

DNA binding

double-stranded RNA binding

protein binding

nucleus

cytoplasm

cytoskeleton

regulation of transcription from RNA polymerase II promoter

negative regulation of transcription

transcription repressor activity

 
226047_at 0.366 7.129 3.259 5.208e-03 0.285 -2.048 MRVI1 murine retrovirus integration site 1 homolog 11 -10551213, -10551213, -10551213 N66571 11p15 Hs.501898 13

cytoplasm

endoplasmic reticulum membrane

membrane

integral to membrane

sarcoplasmic reticulum

perinuclear region of cytoplasm

Vascular smooth muscle contraction

235521_at 0.441 6.453 3.258 5.210e-03 0.285 -2.048 HOXA3 homeobox A3 7 -27112333, -27112333, -27112333 AW137982 7p15-p14 Hs.659337 18

blood vessel remodeling

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

positive regulation of cell proliferation

anterior/posterior pattern formation

specification of organ position

glossopharyngeal nerve morphogenesis

thyroid gland development

sequence-specific DNA binding

thymus development

organ formation

embryonic skeletal system morphogenesis

cartilage development

parathyroid gland development

 
235408_x_at 0.622 3.536 3.257 5.231e-03 0.285 -2.052 ZNF117 zinc finger protein 117 7 -64072264 AW058673 7q11.21 Hs.250693 5

molecular_function

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

biological_process

zinc ion binding

metal ion binding

 
228077_at 0.520 7.456 3.256 5.237e-03 0.285 -2.053 MRI1 methylthioribose-1-phosphate isomerase homolog (S. cerevisiae) 19 13736336 AK026666 19p13.2 Hs.439370 11

cellular amino acid biosynthetic process

methionine biosynthetic process

isomerase activity

identical protein binding

cellular biosynthetic process

S-methyl-5-thioribose-1-phosphate isomerase activity

 
1558954_at 0.316 5.816 3.255 5.244e-03 0.285 -2.054 SNORA78 small nucleolar RNA, H/ACA box 78 16 1955185 BC028232 16p13.3 Hs.707294 2    
230025_at 0.358 5.927 3.255 5.252e-03 0.285 -2.055 GJD3 gap junction protein, delta 3, 31.9kDa 17 -35770430 BF508941 17q21.2 Hs.444663 8

protein binding

plasma membrane

integral to plasma membrane

connexon complex

cell communication

cell surface

gap junction assembly

cell junction

 
218270_at 0.332 9.273 3.254 5.253e-03 0.285 -2.056 MRPL24 mitochondrial ribosomal protein L24 1 -154973717 NM_024540 1q21-q22 Hs.418233 9

structural constituent of ribosome

intracellular

mitochondrion

ribosome

translation

 
234317_s_at 0.457 5.728 3.254 5.256e-03 0.285 -2.056 STOX2 storkhead box 2 4 185063502 AL390216 4q35.1 Hs.21958 Hs.696657 3    
201599_at -0.742 9.166 -3.251 5.290e-03 0.287 -2.062 OAT ornithine aminotransferase (gyrate atrophy) 10 -126075861 NM_000274 10q26 Hs.523332 28

ornithine-oxo-acid transaminase activity

protein binding

cytoplasm

mitochondrion

mitochondrial matrix

visual perception

transferase activity

pyridoxal phosphate binding

Arginine and proline metabolism

Metabolic pathways

203465_at -0.693 8.070 -3.250 5.300e-03 0.287 -2.063 MRPL19 mitochondrial ribosomal protein L19 2 75727416 NM_014763 2q11.1-q11.2 Hs.44024 11

structural constituent of ribosome

intracellular

nucleus

mitochondrion

ribosome

translation

nuclear membrane

 
1570242_x_at -0.267 6.366 -3.249 5.309e-03 0.287 -2.065 SPATA21 spermatogenesis associated 21 1 -16597724 BC022039 1p36.13 Hs.705501 1

calcium ion binding

 
206695_x_at 0.621 3.798 3.249 5.315e-03 0.287 -2.066 ZNF43 zinc finger protein 43 19 -21779591 NM_003423 19p13.1-p12 Hs.534365 13

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
201392_s_at 0.522 8.226 3.247 5.331e-03 0.288 -2.069 IGF2R insulin-like growth factor 2 receptor 6 160310120 BG031974 6q26 Hs.487062 101

glycoprotein binding

receptor activity

insulin-like growth factor receptor activity

transporter activity

insulin-like growth factor binding

mannose binding

membrane fraction

nucleus

nuclear envelope lumen

cytoplasm

lysosome

endosome

Golgi apparatus

integral to plasma membrane

transport

receptor-mediated endocytosis

signal transduction

membrane

trans-Golgi network transport vesicle

Lysosome

232488_at 0.462 6.953 3.247 5.337e-03 0.288 -2.070 AGXT2L2 alanine-glyoxylate aminotransferase 2-like 2 5 -177568146 AK023470 5q35.3 Hs.248746 4

mitochondrion

transaminase activity

transferase activity

pyridoxal phosphate binding

 
238117_at 0.493 3.644 3.246 5.349e-03 0.288 -2.072 PPOX protoporphyrinogen oxidase 1 159402804 AW615133 1q22 Hs.517373 32

oxygen-dependent protoporphyrinogen oxidase activity

oxygen-dependent protoporphyrinogen oxidase activity

mitochondrion

mitochondrial intermembrane space

heme biosynthetic process

electron carrier activity

membrane

oxidoreductase activity

intrinsic to mitochondrial inner membrane

FAD binding

oxidation reduction

Porphyrin and chlorophyll metabolism

Metabolic pathways

228909_at 0.294 4.595 3.245 5.354e-03 0.288 -2.073 LOC642852 hypothetical LOC642852 21 45532394 AW131553 21q22.3 Hs.11637 Hs.676029 Hs.710382 2    
208985_s_at -0.574 9.651 -3.244 5.362e-03 0.288 -2.074 EIF3J eukaryotic translation initiation factor 3, subunit J 15 42616557 BC002719 15q21.1 Hs.404056 19

translation initiation factor activity

protein binding

cytoplasm

cytosol

eukaryotic translation initiation factor 3 complex

translational initiation

 
209563_x_at -0.358 11.120 -3.243 5.383e-03 0.289 -2.077 CALM1 calmodulin 1 (phosphorylase kinase, delta) 14 89933125 BC000454 14q24-q31 Hs.282410 Hs.708270 181  

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Glioma

202204_s_at -0.374 7.366 -3.240 5.410e-03 0.290 -2.082 AMFR autocrine motility factor receptor 16 -54952864 AF124145 16q21 Hs.295137 33

protein polyubiquitination

integral to membrane of membrane fraction

ubiquitin-protein ligase activity

ubiquitin-protein ligase activity

receptor activity

receptor activity

protein binding

endoplasmic reticulum

ubiquitin-dependent protein catabolic process

cell motion

signal transduction

zinc ion binding

membrane

integral to membrane

integral to membrane

ligase activity

integral to endoplasmic reticulum membrane

ER-associated protein catabolic process

ER-associated protein catabolic process

endoplasmic reticulum unfolded protein response

metal ion binding

protein oligomerization

 
1555630_a_at 0.361 6.032 3.240 5.411e-03 0.290 -2.082 RAB34 RAB34, member RAS oncogene family 17 -24065425, -24065425, -24065425 AF327350 17q11.2 Hs.301853 16

nucleotide binding

ruffle

GTPase activity

GTP binding

cytoplasm

early endosome

Golgi apparatus

endocytosis

small GTPase mediated signal transduction

protein transport

guanyl nucleotide binding

 
235070_at -0.370 8.267 -3.238 5.433e-03 0.290 -2.086 A2BP1 ataxin 2-binding protein 1 16 6009132, 6763810, 7322751 AL133898 16p13.3 Hs.459842 22

nucleotide binding

RNA binding

nucleus

cytoplasm

trans-Golgi network

mRNA processing

protein C-terminus binding

RNA splicing

RNA transport

 
206492_at 0.632 5.547 3.237 5.443e-03 0.291 -2.087 FHIT fragile histidine triad gene 3 -59710075 NM_002012 3p14.2 Hs.715588 Hs.715597 164

magnesium ion binding

protein binding

cytoplasm

DNA replication

nucleotide metabolic process

hydrolase activity

manganese ion binding

bis(5'-adenosyl)-triphosphatase activity

Purine metabolism

Small cell lung cancer

Non-small cell lung cancer

208936_x_at 0.370 6.008 3.235 5.468e-03 0.291 -2.092 LGALS8 lectin, galactoside-binding, soluble, 8 1 234748187, 234753361, 234753699 AF074000 1q42-q43 Hs.4082 Hs.708114 29

sugar binding

extracellular space

cytoplasm

 
229327_s_at -0.802 7.139 -3.233 5.492e-03 0.292 -2.095 MAF v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) 16 -78185246 BE674528 16q22-q23 Hs.134859 37

chromatin

cytokine production

transcription factor activity

RNA polymerase II transcription factor activity

protein binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

regulation of chondrocyte differentiation

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

cell development

lens fiber cell differentiation

 
235166_at -0.269 4.133 -3.232 5.500e-03 0.292 -2.097 ZNF148 zinc finger protein 148 3 -126427202 T08836 3q21 Hs.592591 34

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

specific RNA polymerase II transcription factor activity

intracellular

nucleus

DNA-directed RNA polymerase II, core complex

nucleolus

Golgi apparatus

cellular defense response

gamete generation

zinc ion binding

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

 
1554568_at 0.261 2.795 3.231 5.511e-03 0.293 -2.098 DYNLRB1 dynein, light chain, roadblock-type 1 20 32567864 BC007223 20q11.21 Hs.593920 17

microtubule motor activity

protein binding

cytoplasm

cytoplasmic dynein complex

microtubule

microtubule-based movement

visual behavior

 
205726_at -0.660 6.840 -3.230 5.523e-03 0.293 -2.101 DIAPH2 diaphanous homolog 2 (Drosophila) X 95826317, 95826317 NM_006729 Xq21.33 Hs.226483 Hs.716101 14

cytokinesis

actin binding

receptor binding

cytoplasm

early endosome

Golgi apparatus

cytosol

multicellular organismal development

cellular component organization

Rho GTPase binding

actin cytoskeleton organization

cell differentiation

oogenesis

Regulation of actin cytoskeleton

204346_s_at -0.398 6.119 -3.228 5.548e-03 0.294 -2.105 RASSF1 Ras association (RalGDS/AF-6) domain family member 1 3 -50342220, -50342220, -50342220 NM_007182 3p21.3 Hs.476270 170

nucleus

cytoplasm

centrosome

spindle

microtubule

cell cycle

cell cycle arrest

intracellular signaling cascade

Ras protein signal transduction

zinc ion binding

diacylglycerol binding

identical protein binding

metal ion binding

Pathways in cancer

Bladder cancer

Non-small cell lung cancer

226616_s_at -0.504 10.644 -3.224 5.596e-03 0.295 -2.112 NDUFV3 NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa 21 43186446 NM_021075 21q22.3 Hs.473937 16

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

transport

NADH dehydrogenase (ubiquinone) activity

membrane

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

1553954_at 0.660 5.747 3.224 5.597e-03 0.295 -2.112 ALG14 asparagine-linked glycosylation 14 homolog (S. cerevisiae) 1 -95220866 BU682208 1p21.3 Hs.408927 5

endoplasmic reticulum

membrane

integral to membrane

N-Glycan biosynthesis

Metabolic pathways

208753_s_at -0.459 8.160 -3.223 5.601e-03 0.295 -2.113 NAP1L1 nucleosome assembly protein 1-like 1 12 -74724938 BC002387 12q21.2 Hs.524599 Hs.695185 17

protein binding

nucleus

chromatin assembly complex

DNA replication

nucleosome assembly

positive regulation of cell proliferation

melanosome

 
219017_at 0.493 4.987 3.223 5.610e-03 0.295 -2.115 ETNK1 ethanolamine kinase 1 12 22669342, 22669342 NM_018638 12p12.1 Hs.29464 4

nucleotide binding

ethanolamine kinase activity

ATP binding

cytoplasm

phosphatidylethanolamine biosynthetic process

transferase activity

Glycerophospholipid metabolism

Metabolic pathways

1555789_s_at -0.356 6.167 -3.222 5.618e-03 0.295 -2.116 PHF23 PHD finger protein 23 17 -7079070 AY099328 17p13.1 Hs.647432 4

protein binding

zinc ion binding

metal ion binding

 
213373_s_at 0.514 4.414 3.220 5.640e-03 0.295 -2.119 CASP8 caspase 8, apoptosis-related cysteine peptidase 2 201806410, 201806410, 201830998, 201833467 BF439983 2q33-q34 Hs.599762 362

cysteine-type endopeptidase activity

nucleus

cytoplasm

mitochondrion

cytosol

cytoskeleton

peptidase activity

induction of apoptosis by extracellular signals

induction of apoptosis by extracellular signals

activation of pro-apoptotic gene products

death-inducing signaling complex

response to tumor necrosis factor

identical protein binding

regulation of apoptosis

positive regulation of I-kappaB kinase/NF-kappaB cascade

proteolysis involved in cellular protein catabolic process

p53 signaling pathway

Apoptosis

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

Alzheimer's disease

Huntington's disease

Pathways in cancer

214844_s_at -0.541 9.310 -3.220 5.641e-03 0.295 -2.119 DOK5 docking protein 5 20 52525672 AL050069 20q13.2 Hs.656582 10

MAPKKK cascade

transmembrane receptor protein tyrosine kinase signaling protein activity

insulin receptor binding

transmembrane receptor protein tyrosine kinase signaling pathway

nervous system development

 
228696_at 0.267 4.077 3.219 5.655e-03 0.295 -2.122 SLC45A3 solute carrier family 45, member 3 1 -203893603 AA631143 1q32.1 Hs.278695 9

transport

membrane

integral to membrane

 
207394_at 0.442 3.848 3.216 5.688e-03 0.296 -2.127 ZNF137 zinc finger protein 137 19 57791748 NM_003438 19q13.4 Hs.373648 3    
214121_x_at -0.591 9.173 -3.216 5.691e-03 0.296 -2.127 PDLIM7 PDZ and LIM domain 7 (enigma) 5 -176849852, -176843000 AA086229 5q35.3 Hs.533040 22

ossification

protein binding

cytoplasm

cytoskeleton

receptor-mediated endocytosis

multicellular organismal development

zinc ion binding

cell differentiation

metal ion binding

 
235695_at 0.297 4.629 3.210 5.762e-03 0.299 -2.139 INPP4A inositol polyphosphate-4-phosphatase, type I, 107kDa 2 98427752, 98427752 AI051236 2q11.2 Hs.469386 16

signal transduction

phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity

hydrolase activity

phosphatidyl-inositol-4,5-bisphosphate 4-phosphatase activity

Inositol phosphate metabolism

Metabolic pathways

Phosphatidylinositol signaling system

203920_at 0.419 5.158 3.207 5.787e-03 0.300 -2.142 NR1H3 nuclear receptor subfamily 1, group H, member 3 11 47227024, 47236072 NM_005693 11p11.2 Hs.438863 Hs.513522 94

transcription factor activity

steroid hormone receptor activity

transcription coactivator activity

thyroid hormone receptor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

positive regulation of specific transcription from RNA polymerase II promoter

negative regulation of foam cell differentiation

positive regulation of triglyceride biosynthetic process

positive regulation of cholesterol efflux

negative regulation of cholesterol storage

positive regulation of cellular protein metabolic process

negative regulation of lipid transport

sequence-specific DNA binding

positive regulation of fatty acid biosynthetic process

metal ion binding

negative regulation of pinocytosis

positive regulation of lipoprotein lipase activity

PPAR signaling pathway

206175_x_at 0.351 4.863 3.207 5.791e-03 0.300 -2.143 ZNF222 zinc finger protein 222 19 49221333 NM_013360 19q13.2 Hs.279840 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
231908_at 0.320 4.401 3.207 5.793e-03 0.300 -2.143 ZDHHC18 zinc finger, DHHC-type containing 18 1 27025787 AL034380 1p36.11 Hs.523710 4

zinc ion binding

acyltransferase activity

membrane

integral to membrane

transferase activity

metal ion binding

 
222128_at 0.422 4.525 3.207 5.798e-03 0.300 -2.144 NSUN6 NOL1/NOP2/Sun domain family, member 6 10 -18874269 U80764 10p12.31 Hs.396175 4

RNA binding

methyltransferase activity

transferase activity

 
224352_s_at -0.447 11.148 -3.206 5.804e-03 0.300 -2.145 CFL2 cofilin 2 (muscle) 14 -34249338, -34249338, -34249338 AF134802 14q12 Hs.180141 20

actin binding

protein binding

intracellular

nucleus

cytoplasm

cytoskeleton

nuclear matrix

Axon guidance

Fc gamma R-mediated phagocytosis

Regulation of actin cytoskeleton

218403_at -0.330 9.088 -3.205 5.813e-03 0.300 -2.146 TRIAP1 TP53 regulated inhibitor of apoptosis 1 12 -119366146 NM_016399 12q24.31 Hs.69499 7

protein binding

cytoplasm

mitochondrion

apoptosis

anti-apoptosis

DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest

caspase inhibitor activity

perinuclear region of cytoplasm

 
227135_at -0.281 5.638 -3.205 5.813e-03 0.300 -2.146 NAAA N-acylethanolamine acid amidase 4 -77053832, -77050831 AI436803 4q21.1 Hs.437365 12

molecular_function

cellular_component

cytoplasm

lysosome

lipid metabolic process

biological_process

hydrolase activity

 
208763_s_at -0.482 9.335 -3.204 5.829e-03 0.300 -2.149 TSC22D3 TSC22 domain family, member 3 X -106843107, -106843107, -106843107 AL110191 Xq22.3 Hs.716410 24

transcription factor activity

regulation of transcription, DNA-dependent

 
242564_at 0.298 3.681 3.204 5.832e-03 0.300 -2.149 ZNF814 zinc finger protein 814 19 -63072558 AI703142 19q13.43 Hs.634143 Hs.669024 Hs.719319 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
235497_at -0.584 7.209 -3.202 5.856e-03 0.300 -2.153 LOC643837 hypothetical LOC643837 1 752926 AL079648 1p36.33 Hs.133183 2    
226664_at 0.287 6.004 3.201 5.860e-03 0.300 -2.154 TBC1D20 TBC1 domain family, member 20 20 -364123 AL121747 20p13 Hs.590876 8

GTPase activator activity

Rab GTPase activator activity

intracellular

membrane

integral to membrane

regulation of Rab GTPase activity

interspecies interaction between organisms

 
238577_s_at 0.350 2.850 3.201 5.863e-03 0.300 -2.154 TSHZ2 teashirt zinc finger homeobox 2 20 51022283 AA628481 20q13.2 Hs.271605 Hs.473117 Hs.649877 6

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

sequence-specific DNA binding

metal ion binding

 
204479_at 0.368 6.163 3.201 5.866e-03 0.300 -2.155 OSTF1 osteoclast stimulating factor 1 9 76893217 NM_012383 9q13-q21.2 Hs.494192 17

ossification

intracellular

cytoplasm

signal transduction

identical protein binding

 
223113_at 0.400 6.164 3.201 5.868e-03 0.300 -2.155 TMEM138 transmembrane protein 138 11 60886431 AF151030 11q12.2 Hs.406530 3

membrane

integral to membrane

 
227396_at 0.633 5.515 3.199 5.885e-03 0.300 -2.157 PTPRJ protein tyrosine phosphatase, receptor type, J 11 47958685, 47958685 AI631833 11p11.2 Hs.318547 36

transmembrane receptor protein tyrosine phosphatase activity

protein binding

nucleus

plasma membrane

integral to plasma membrane

protein amino acid dephosphorylation

transmembrane receptor protein tyrosine kinase signaling pathway

cell-cell signaling

hydrolase activity

cell junction

Adherens junction

209681_at -1.258 8.790 -3.199 5.889e-03 0.300 -2.158 SLC19A2 solute carrier family 19 (thiamine transporter), member 2 1 -167699772 AF153330 1q23.3 Hs.30246 32

folic acid binding

cytoplasm

plasma membrane

transport

folic acid transporter activity

reduced folate carrier activity

thiamin transmembrane transporter activity

thiamin transport

integral to membrane

thiamin and derivative metabolic process

 
241172_at 0.251 3.852 3.199 5.890e-03 0.300 -2.158 GRIA2 glutamate receptor, ionotropic, AMPA 2 4 158361185, 158361269 AI939470 4q32-q33 Hs.32763 48

regulation of receptor recycling

receptor activity

alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity

ion channel activity

extracellular-glutamate-gated ion channel activity

protein binding

plasma membrane

ion transport

signal transduction

response to lithium ion

postsynaptic density

kainate selective glutamate receptor activity

integral to membrane

cell junction

PDZ domain binding

growth cone

synaptic vesicle membrane

receptor internalization

asymmetric synapse

presynaptic membrane

cell soma

dendritic spine

dendritic shaft

protein complex

establishment of protein localization

postsynaptic membrane

positive regulation of synaptic transmission

regulation of synaptic transmission, glutamatergic

Neuroactive ligand-receptor interaction

Long-term potentiation

Long-term depression

Amyotrophic lateral sclerosis (ALS)

223125_s_at -0.409 9.410 -3.199 5.891e-03 0.300 -2.158 C1orf21 chromosome 1 open reading frame 21 1 182622772 AL563236 1q25 Hs.497159 Hs.719188 8    
201258_at -0.477 11.844 -3.198 5.900e-03 0.300 -2.160 RPS16 ribosomal protein S16 19 -44615686 NM_001020 19q13.1 Hs.397609 24

RNA binding

structural constituent of ribosome

protein binding

intracellular

cytosol

ribosome

rRNA processing

translational elongation

cytosolic small ribosomal subunit

cytosolic small ribosomal subunit

ribosomal small subunit biogenesis

Ribosome

225466_at -0.381 7.832 -3.198 5.901e-03 0.300 -2.160 PATL1 protein associated with topoisomerase II homolog 1 (yeast) 11 -59160767 BG291961 11q12.1 Hs.591960 8

cytoplasmic mRNA processing body

cytoplasm

RNA degradation

213899_at 0.491 6.305 3.197 5.907e-03 0.300 -2.161 METAP2 methionyl aminopeptidase 2 12 94391952 AI743685 12q22 Hs.444986 35

aminopeptidase activity

cytoplasm

proteolysis

peptidase activity

metalloexopeptidase activity

cellular process

protein processing

peptidyl-methionine modification

N-terminal protein amino acid modification

metal ion binding

cobalt ion binding

 
210102_at 0.420 4.548 3.193 5.958e-03 0.302 -2.168 VWA5A von Willebrand factor A domain containing 5A 11 123491320, 123491320 BC001234 11q23 Hs.152944 5    
202479_s_at -0.475 5.774 -3.192 5.969e-03 0.302 -2.170 TRIB2 tribbles homolog 2 (Drosophila) 2 12774448, 12774448 BC002637 2p24.3 Hs.467751 16

nucleotide binding

protein kinase activity

protein kinase inhibitor activity

protein binding

ATP binding

cytoplasm

cytoskeleton

protein amino acid phosphorylation

regulation of MAP kinase activity

 
211938_at -0.291 10.524 -3.192 5.970e-03 0.302 -2.170 EIF4B eukaryotic translation initiation factor 4B 12 51686328 BF247371 12q13.13 Hs.648394 Hs.702041 23

nucleotide binding

RNA binding

translation initiation factor activity

cytosol

translation

regulation of translational initiation

eukaryotic translation initiation factor 4F complex

mTOR signaling pathway

226017_at 0.392 6.648 3.192 5.973e-03 0.302 -2.171 CMTM7 CKLF-like MARVEL transmembrane domain containing 7 3 32408166 AI708432 3p22.3 Hs.440494 4

cytokine activity

extracellular space

chemotaxis

membrane

integral to membrane

 
221231_s_at -0.302 4.221 -3.192 5.977e-03 0.302 -2.171 C14orf102 chromosome 14 open reading frame 102 14 -89814150 NM_017970 14q32.11 Hs.528131 4

protein binding

 
227259_at 0.405 5.147 3.188 6.024e-03 0.304 -2.178 CD47 CD47 molecule 3 -109244630 BF439618 3q13.1-q13.2 Hs.446414 68

protein binding

plasma membrane

plasma membrane

integral to plasma membrane

cell adhesion

integrin-mediated signaling pathway

positive regulation of cell proliferation

positive regulation of cell-cell adhesion

positive regulation of T cell activation

thrombospondin receptor activity

ECM-receptor interaction

1555759_a_at 0.344 5.788 3.188 6.026e-03 0.304 -2.179 CCL5 chemokine (C-C motif) ligand 5 17 -31222608 AF043341 17q11.2-q12 Hs.514821 312

signal transducer activity

extracellular region

extracellular space

cytoplasm

cellular calcium ion homeostasis

exocytosis

cell motion

chemotaxis

inflammatory response

immune response

cellular defense response

response to oxidative stress

cell adhesion

signal transduction

cell-cell signaling

chemokine activity

response to virus

response to tumor necrosis factor

chemoattractant activity

negative regulation of viral genome replication

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

Toll-like receptor signaling pathway

Prion diseases

Epithelial cell signaling in Helicobacter pylori infection

218488_at 0.222 9.280 3.186 6.045e-03 0.305 -2.181 EIF2B3 eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa 1 -45089036 NM_020365 1p34.1 Hs.533549 25

translation initiation factor activity

guanyl-nucleotide exchange factor activity

guanyl-nucleotide exchange factor activity

protein binding

cytoplasm

eukaryotic translation initiation factor 2B complex

translational initiation

biosynthetic process

response to heat

response to heat

response to glucose stimulus

oligodendrocyte development

transferase activity

nucleotidyltransferase activity

negative regulation of translational initiation in response to stress

response to peptide hormone stimulus

cellular response to stimulus

 
224677_x_at -0.291 8.682 -3.185 6.057e-03 0.305 -2.183 C11orf31 chromosome 11 open reading frame 31 11 57265297 AV729234 11q12.1 Hs.655373 Hs.719147 6

selenium binding

cell redox homeostasis

 
1569171_a_at 0.286 4.857 3.184 6.071e-03 0.305 -2.185 FXR1 fragile X mental retardation, autosomal homolog 1 3 182113145 BC034416 3q28 Hs.478407 30

RNA binding

nucleolus

cytoplasm

polysome

apoptosis

multicellular organismal development

muscle organ development

cell differentiation

 
1552732_at -1.144 10.048 -3.184 6.072e-03 0.305 -2.185 ABRA actin-binding Rho activating protein 8 -107840886 AL832152 8q23.1 Hs.374668 12

protein import into nucleus, translocation

transcription coactivator activity

actin binding

cytoplasm

plasma membrane

protein transport

actin cytoskeleton

sarcomere

positive regulation of Rho protein signal transduction

positive regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

positive regulation of transcription factor activity

intracellular protein transmembrane transport

 
203921_at 0.295 4.537 3.182 6.099e-03 0.305 -2.190 CHST2 carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2 3 144321357 NM_004267 3q24 Hs.8786 19

N-acetylglucosamine 6-O-sulfotransferase activity

Golgi apparatus

trans-Golgi network

carbohydrate metabolic process

N-acetylglucosamine metabolic process

sulfur metabolic process

inflammatory response

multicellular organismal development

membrane

integral to membrane

transferase activity

intrinsic to Golgi membrane

Keratan sulfate biosynthesis

Metabolic pathways

200961_at -0.408 8.180 -3.182 6.103e-03 0.305 -2.190 SEPHS2 selenophosphate synthetase 2 16 -30362452 NM_012248 16p11.2 Hs.718460 7

nucleotide binding

selenide, water dikinase activity

ATP binding

cellular_component

selenium binding

selenocysteine biosynthetic process

transferase activity

Selenoamino acid metabolism

Metabolic pathways

214294_at -0.273 5.290 -3.182 6.103e-03 0.305 -2.190 KIAA0485 hypothetical LOC57235     AI122905   Hs.604754 1    
218786_at -0.395 6.181 -3.181 6.106e-03 0.305 -2.190 NT5DC3 5'-nucleotidase domain containing 3 12 -102690210 NM_016575 12q22-q23.1 Hs.48428 4

magnesium ion binding

hydrolase activity

 
205472_s_at 0.562 4.213 3.181 6.116e-03 0.305 -2.192 DACH1 dachshund homolog 1 (Drosophila) 13 -70910098 NM_004392 13q22 Hs.129452 24

nucleotide binding

transcription factor activity

protein binding

nucleus

transcription factor complex

cytoplasm

multicellular organismal development

regulation of transcription

 
228316_at 0.423 4.186 3.180 6.119e-03 0.305 -2.192 C2orf63 chromosome 2 open reading frame 63 2 -55253187, -55253187 AA905470 2p16.1 Hs.347014 4

binding

 
204294_at 0.350 7.196 3.180 6.120e-03 0.305 -2.193 AMT aminomethyltransferase 3 -49429214 NM_000481 3p21.2-p21.1 Hs.102 17

aminomethyltransferase activity

cytoplasm

mitochondrion

glycine catabolic process

transaminase activity

transferase activity

Glycine, serine and threonine metabolism

One carbon pool by folate

Nitrogen metabolism

Metabolic pathways

204589_at 0.530 7.466 3.180 6.122e-03 0.305 -2.193 NUAK1 NUAK family, SNF1-like kinase, 1 12 -104981254 NM_014840 12q23.3 Hs.719171 13

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

transferase activity

 
217821_s_at -0.390 5.997 -3.180 6.125e-03 0.305 -2.193 WBP11 WW domain binding protein 11 12 -14830678 AF118023 12p12.3 Hs.655138 13

single-stranded DNA binding

protein binding

nucleus

cytoplasm

rRNA processing

mRNA processing

RNA splicing

protein phosphatase type 1 regulator activity

nuclear speck

 
228790_at -0.592 6.461 -3.180 6.128e-03 0.305 -2.194 FAM110B family with sequence similarity 110, member B 8 59069666 AW264082 8q12.1 Hs.154652 7

cytoplasm

mitochondrion

centrosome

 
1554679_a_at -1.411 8.658 -3.177 6.155e-03 0.306 -2.198 LAPTM4B lysosomal protein transmembrane 4 beta 8 98856984 AF317417 8q22.1 Hs.492314 17

transport

endomembrane system

membrane

integral to membrane

Lysosome

212409_s_at -0.655 5.992 -3.177 6.159e-03 0.306 -2.198 TOR1AIP1 torsin A interacting protein 1 1 178118042 AK021613 1q24.2 Hs.496459 9

nucleus

membrane

integral to membrane

 
226617_at -0.586 8.348 -3.175 6.182e-03 0.306 -2.202 ARL5A ADP-ribosylation factor-like 5A 2 -152365725 AW291264 2q23.3 Hs.470233 6

nucleotide binding

GTP binding

intracellular

small GTPase mediated signal transduction

 
201531_at -0.539 7.413 -3.175 6.183e-03 0.306 -2.202 ZFP36 zinc finger protein 36, C3H type, homolog (mouse) 19 44589326 NM_003407 19q13.1 Hs.534052 Hs.707878 62

nuclear-transcribed mRNA poly(A) tail shortening

DNA binding

single-stranded RNA binding

mRNA binding

protein binding

nucleus

cytoplasm

cytosol

mRNA catabolic process

protein kinase cascade

zinc ion binding

AU-rich element binding

regulation of mRNA stability

negative regulation of myeloid cell differentiation

metal ion binding

negative regulation of inflammatory response

RNA destabilization

 
209545_s_at 0.285 5.602 3.174 6.204e-03 0.306 -2.205 RIPK2 receptor-interacting serine-threonine kinase 2 8 90839109 AF064824 8q21 Hs.103755 52

nucleotide binding

protein serine/threonine kinase activity

protein serine/threonine kinase activity

signal transducer activity

protein binding

ATP binding

intracellular

cytoplasm

cytosol

protein amino acid phosphorylation

inflammatory response

signal transduction

transferase activity

LIM domain binding

positive regulation of interleukin-6 production

positive regulation of tumor necrosis factor production

positive regulation of stress-activated MAPK cascade

toll-like receptor 2 signaling pathway

T cell proliferation

positive regulation of apoptosis

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of JNK cascade

CARD domain binding

defense response to Gram-positive bacterium

positive regulation of NF-kappaB transcription factor activity

positive regulation of ERK1 and ERK2 cascade

Neurotrophin signaling pathway

206182_at 0.381 5.196 3.174 6.205e-03 0.306 -2.205 ZNF134 zinc finger protein 134 19 62817641 NM_003435 19q13.4 Hs.469694 2

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
208407_s_at 0.397 6.604 3.172 6.219e-03 0.307 -2.207 CTNND1 catenin (cadherin-associated protein), delta 1 11 57285809 NM_001331 11q11 Hs.166011 99

protein binding

nucleus

cytoplasm

plasma membrane

Wnt receptor signaling pathway

cell-cell adhesion

cadherin binding

regulation of transcription

Adherens junction

Leukocyte transendothelial migration

238697_at 0.352 3.047 3.172 6.228e-03 0.307 -2.208 NCRNA00086 non-protein coding RNA 86 X 134383533 AA565509 Xq26.3 Hs.374414 3    
212552_at 0.337 6.716 3.170 6.250e-03 0.307 -2.211 HPCAL1 hippocalcin-like 1 2 10360490, 10361276 BE617588 2p25.1 Hs.467696 Hs.580427 20

calcium ion binding

protein binding

 
205160_at 0.416 6.679 3.169 6.265e-03 0.308 -2.214 PEX11A peroxisomal biogenesis factor 11 alpha 15 -88027290 AL360141 15q26.1 Hs.31034 9

peroxisome

peroxisomal membrane

integral to peroxisomal membrane

signal transduction

membrane

integral to membrane

peroxisome fission

 
210321_at 0.393 4.655 3.169 6.270e-03 0.308 -2.214 GZMH granzyme H (cathepsin G-like 2, protein h-CCPX) 14 -24145532 M36118 14q11.2 Hs.348264 17

serine-type endopeptidase activity

cytoplasm

proteolysis

apoptosis

peptidase activity

cytolysis

 
225314_at 0.527 5.913 3.168 6.272e-03 0.308 -2.214 OCIAD2 OCIA domain containing 2 4 -48582161 BG291649 4p11 Hs.95835 2

mitochondrion

mitochondrial inner membrane

endosome

 
212681_at 0.997 4.830 3.168 6.281e-03 0.308 -2.216 EPB41L3 erythrocyte membrane protein band 4.1-like 3 18 -5382387 AI770004 18p11.32 Hs.213394 39

actin binding

structural molecule activity

cytoplasm

cytoskeleton

plasma membrane

cell-cell junction

biological_process

extrinsic to membrane

cortical actin cytoskeleton organization

Tight junction

202341_s_at 0.321 5.699 3.167 6.287e-03 0.308 -2.217 TRIM2 tripartite motif-containing 2 4 154293719, 154345047 AA149745 4q31.3 Hs.435711 6

protein binding

intracellular

cytoplasm

biological_process

zinc ion binding

metal ion binding

 
202467_s_at -0.498 9.905 -3.166 6.298e-03 0.308 -2.218 COPS2 COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis) 15 -47204762 NM_004236 15q21.2 Hs.369614 37

signal transducer activity

protein binding

protein binding

nucleus

nucleolus

cytoplasm

transcription from RNA polymerase II promoter

signal transduction

signalosome

 
223461_at 0.549 6.889 3.165 6.317e-03 0.308 -2.221 TBC1D7 TBC1 domain family, member 7 6 -13413164 AF151073 6p24.1 Hs.484678 9

GTPase activator activity

Rab GTPase activator activity

intracellular

regulation of Rab GTPase activity

 
203803_at -0.860 7.593 -3.163 6.341e-03 0.309 -2.224 PCYOX1 prenylcysteine oxidase 1 2 70338734 N45309 2p13.3 Hs.567502 13

prenylcysteine oxidase activity

binding

lysosome

oxidoreductase activity

prenylated protein catabolic process

prenylcysteine catabolic process

very-low-density lipoprotein particle

oxidation reduction

 
235686_at 0.276 4.108 3.163 6.342e-03 0.309 -2.224 C2orf60 chromosome 2 open reading frame 60 2 -200501878 BF108661 2q33.1 Hs.204619 3    
204999_s_at 1.299 5.575 3.163 6.347e-03 0.309 -2.225 ATF5 activating transcription factor 5 19 55123785 BC005174 19q13.3 Hs.9754 25

transcription factor activity

RNA polymerase II transcription factor activity

transcription corepressor activity

nucleus

transcription factor complex

cytoplasm

regulation of transcription from RNA polymerase II promoter

anti-apoptosis

sequence-specific DNA binding

protein dimerization activity

 
211450_s_at -0.461 4.469 -3.161 6.368e-03 0.309 -2.228 MSH6 mutS homolog 6 (E. coli) 2 47863724 D89646 2p16 Hs.445052 162

nucleotide binding

magnesium ion binding

four-way junction DNA binding

meiotic mismatch repair

nuclear chromatin

chromatin binding

damaged DNA binding

protein binding

ATP binding

nucleus

response to DNA damage stimulus

determination of adult lifespan

DNA damage response, signal transduction resulting in induction of apoptosis

response to UV

somatic hypermutation of immunoglobulin genes

somatic recombination of immunoglobulin gene segments

ATPase activity

guanine/thymine mispair binding

single guanine insertion binding

single thymine insertion binding

MutSalpha complex

oxidized purine DNA binding

MutLalpha complex binding

protein homodimerization activity

ADP binding

maintenance of DNA repeat elements

isotype switching

negative regulation of DNA recombination

positive regulation of helicase activity

Mismatch repair

Pathways in cancer

Colorectal cancer

222762_x_at 0.431 6.680 3.160 6.387e-03 0.310 -2.231 LIMD1 LIM domains containing 1 3 45611326 AU144259 3p21.3 Hs.193370 Hs.621057 14

protein binding

regulation of transcription, DNA-dependent

signal transduction

multicellular organismal development

zinc ion binding

metal ion binding

 
203870_at 0.528 7.329 3.159 6.390e-03 0.310 -2.231 USP46 ubiquitin specific peptidase 46 4 -53151885, -53151885 BE856374 4q12 Hs.7966 10

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

protein binding

ubiquitin-dependent protein catabolic process

behavior

peptidase activity

cysteine-type peptidase activity

protein deubiquitination

regulation of synaptic transmission, GABAergic

 
213592_at 0.545 6.462 3.159 6.395e-03 0.310 -2.232 APLNR apelin receptor 11 -56757629 X89271 11q12 Hs.438311 29

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

Neuroactive ligand-receptor interaction

226515_at -0.386 8.030 -3.157 6.421e-03 0.311 -2.236 CCDC127 coiled-coil domain containing 127 5 -257874 AL577758 5p15.33 Hs.294145 4    
213035_at -0.644 7.921 -3.156 6.438e-03 0.311 -2.238 ANKRD28 ankyrin repeat domain 28 3 -15683747 AI081194 3p25.1 Hs.335239 10

protein binding

nucleus

nucleoplasm

 
224932_at 0.454 11.130 3.156 6.440e-03 0.311 -2.238 CHCHD10 coiled-coil-helix-coiled-coil-helix domain containing 10 22 -22438020 AI814909 22q11.23 Hs.66915 2

mitochondrion

 
213733_at 0.296 4.788 3.155 6.447e-03 0.311 -2.239 MYO1F myosin IF 19 -8491996 BF740152 19p13.3-p13.2 Hs.465818 11

nucleotide binding

motor activity

actin binding

calmodulin binding

ATP binding

negative regulation of cell adhesion

biological_process

unconventional myosin complex

positive regulation of cell migration

cortical actin cytoskeleton

filamentous actin

regulation of actin cytoskeleton organization

neutrophil degranulation

regulation of innate immune response

defense response to Gram-positive bacterium

 
219514_at -0.409 5.030 -3.153 6.471e-03 0.311 -2.243 ANGPTL2 angiopoietin-like 2 9 -128889448 NM_012098 9q34 Hs.653262 11

receptor binding

extracellular region

extracellular space

signal transduction

multicellular organismal development

 
218178_s_at -0.533 8.778 -3.152 6.490e-03 0.312 -2.245 CHMP1B chromatin modifying protein 1B 18 11841388 NM_020412 18p11.21 Hs.656244 16

cytoplasm

endosome

cytosol

cell cycle

protein transport

membrane

protein domain specific binding

cell division

Endocytosis

203721_s_at -0.637 7.769 -3.151 6.503e-03 0.312 -2.247 UTP18 UTP18, small subunit (SSU) processome component, homolog (yeast) 17 46692895 NM_016001 17q21.33 Hs.709327 11

nucleus

nucleolus

small nucleolar ribonucleoprotein complex

rRNA processing

 
204185_x_at -0.462 9.597 -3.151 6.503e-03 0.312 -2.247 PPID peptidylprolyl isomerase D 4 -159849728 NM_005038 4q31.3 Hs.581725 25

peptidyl-prolyl cis-trans isomerase activity

cytoplasm

protein folding

cyclosporin A binding

isomerase activity

heat shock protein binding

Calcium signaling pathway

Parkinson's disease

Huntington's disease

201886_at 0.247 7.279 3.150 6.508e-03 0.312 -2.248 DCAF11 DDB1 and CUL4 associated factor 11 14 23653745, 23653825, 23654331, 23654333 NM_025230 14q11.2 Hs.525251 9

protein binding

 
218300_at 0.288 7.164 3.150 6.509e-03 0.312 -2.248 C16orf53 chromosome 16 open reading frame 53 16 29735028 NM_024516 16p11.2 Hs.702841 7    
201811_x_at 0.834 8.105 3.150 6.517e-03 0.312 -2.249 SH3BP5 SH3-domain binding protein 5 (BTK-associated) 3 -15271360, -15271360 NM_004844 3p24.3 Hs.257761 Hs.719150 11

protein kinase inhibitor activity

protein binding

cytoplasm

mitochondrion

intracellular signaling cascade

SH3 domain binding

 
231837_at -0.626 7.163 -3.148 6.538e-03 0.312 -2.252 USP28 ubiquitin specific peptidase 28 11 -113173806 AB040948 11q23 Hs.503891 9

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
213238_at 0.357 5.264 3.148 6.539e-03 0.312 -2.252 ATP10D ATPase, class V, type 10D 4 47182166 AI478147 4p12 Hs.437241 4

nucleotide binding

magnesium ion binding

phospholipid-translocating ATPase activity

ATP binding

ATP biosynthetic process

cation transport

ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism

phospholipid transport

membrane

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

 
223093_at -0.476 6.531 -3.147 6.550e-03 0.312 -2.253 ANKH ankylosis, progressive homolog (mouse) 5 -14757908 T99215 5p15.1 Hs.156727 36

skeletal system development

inorganic phosphate transmembrane transporter activity

integral to plasma membrane

transport

phosphate transport

locomotory behavior

outer membrane

outer membrane

regulation of bone mineralization

regulation of bone mineralization

inorganic diphosphate transmembrane transporter activity

 
236813_at 0.404 5.600 3.147 6.556e-03 0.312 -2.254 MORN4 MORN repeat containing 4 10 -99364299, -99364299 N21659 10q24.2 Hs.217409 6    
218352_at 0.531 5.266 3.145 6.584e-03 0.313 -2.258 RCBTB1 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 13 -49004082 NM_018191 13q14 Hs.508021 11

protein binding

nucleus

cytoplasm

cell cycle

chromatin modification

regulation of transcription

 
203161_s_at -0.301 4.074 -3.143 6.606e-03 0.314 -2.261 RNF8 ring finger protein 8 6 37429725 NM_003958 6p21.3 Hs.485278 24

ubiquitin ligase complex

chromatin binding

ubiquitin-protein ligase activity

nucleus

chromosome

double-strand break repair

response to DNA damage stimulus

cell cycle

mitosis

zinc ion binding

response to ionizing radiation

protein ubiquitination

chromatin modification

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

histone H2A ubiquitination

histone H2B ubiquitination

histone binding

positive regulation of DNA repair

metal ion binding

cell division

 
230660_at 0.288 4.242 3.143 6.613e-03 0.314 -2.262 SERTAD4 SERTA domain containing 4 1 208472817 AU146709 1q32.1-q41 Hs.600545 2    
240381_at 0.317 5.864 3.141 6.629e-03 0.314 -2.264 ZBED5 zinc finger, BED-type containing 5 11 -10830829 AA813103 11p15.3 Hs.655066 5

DNA binding

zinc ion binding

metal ion binding

 
203238_s_at 0.355 5.554 3.141 6.630e-03 0.314 -2.264 NOTCH3 Notch homolog 3 (Drosophila) 19 -15131443 NM_000435 19p13.2-p13.1 Hs.8546 96

receptor activity

calcium ion binding

protein binding

nucleus

plasma membrane

Notch signaling pathway

multicellular organismal development

integral to membrane

forebrain development

regulation of transcription

negative regulation of neuron differentiation

neuron fate commitment

regulation of developmental process

Dorso-ventral axis formation

Notch signaling pathway

238614_x_at 0.288 2.660 3.140 6.651e-03 0.314 -2.267 ZNF430 zinc finger protein 430 19 20995336 AW954842 19p12 Hs.466289 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
233801_s_at 0.367 5.443 3.140 6.652e-03 0.314 -2.267 SEMA6D sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D 15 45797977, 45797977 AK022747 15q21.1 Hs.511265 8

receptor activity

cytoplasm

plasma membrane

multicellular organismal development

nervous system development

integral to membrane

cell differentiation

Axon guidance

204950_at 0.438 6.268 3.139 6.665e-03 0.314 -2.269 CARD8 caspase recruitment domain family, member 8 19 -53403154 NM_014959 19q13.33 Hs.446146 Hs.655940 23

protein binding

intracellular

nucleus

cytoplasm

caspase activator activity

NACHT domain binding

protein homodimerization activity

regulation of apoptosis

negative regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of caspase activity

positive regulation of interleukin-1 beta secretion

 
224378_x_at 0.328 7.995 3.138 6.673e-03 0.314 -2.270 MAP1LC3A microtubule-associated protein 1 light chain 3 alpha 20 32598352, 32610179 AF276658 20cen-q13 Hs.632273 29

autophagic vacuole formation

protein binding

cytoplasm

autophagic vacuole

cytosol

microtubule

autophagy

phosphatidylethanolamine binding

modification-dependent protein catabolic process

organelle membrane

cytoplasmic vesicle

 
226916_x_at -0.280 6.304 -3.138 6.673e-03 0.314 -2.270 DPP9 dipeptidyl-peptidase 9 19 -4626243 AW190431 19p13.3 Hs.515081 14

aminopeptidase activity

cytoplasm

cytosol

proteolysis

peptidase activity

serine-type peptidase activity

membrane

 
216489_at 0.359 3.718 3.137 6.684e-03 0.314 -2.272 TRPM3 transient receptor potential cation channel, subfamily M, member 3 9 -72588597, -72339785, -72339785 AB046836 9q21.12 Hs.47288 19

calcium channel activity

calcium ion binding

cation transport

calcium ion transport

membrane

integral to membrane

 
235180_at -0.232 2.966 -3.137 6.694e-03 0.314 -2.273 STYX serine/threonine/tyrosine interacting protein 14 52266632 AI492892   Hs.364980 8

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

 
238944_at 0.560 6.368 3.137 6.694e-03 0.314 -2.273 ZNF404 zinc finger protein 404 19 -49068354 AI393706 19q13.31 Hs.76561 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
226089_at 0.414 4.845 3.136 6.698e-03 0.314 -2.273 RABL3 RAB, member of RAS oncogene family-like 3 3 -121888217 AI742028 3q13.33 Hs.444360 1

nucleotide binding

GTP binding

intracellular

small GTPase mediated signal transduction

 
224839_s_at 0.738 7.443 3.136 6.699e-03 0.314 -2.274 GPT2 glutamic pyruvate transaminase (alanine aminotransferase) 2 16 45475808, 45476602 BG328998 16q12.1 Hs.460693 9

L-alanine:2-oxoglutarate aminotransferase activity

transaminase activity

biosynthetic process

pyridoxal phosphate binding

Alanine, aspartate and glutamate metabolism

Carbon fixation in photosynthetic organisms

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Metabolic pathways

210967_x_at -0.288 9.549 -3.136 6.700e-03 0.314 -2.274 CACNB1 calcium channel, voltage-dependent, beta 1 subunit 17 -34586914, -34583234 M92301 17q21-q22 Hs.635 18

voltage-gated ion channel activity

voltage-gated calcium channel activity

calcium ion binding

plasma membrane

voltage-gated calcium channel complex

ion transport

calcium ion transport

MAPK signaling pathway

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

238813_at 0.339 4.336 3.136 6.702e-03 0.314 -2.274 ALAS2 aminolevulinate, delta-, synthase 2 X -55052213 AI910842 Xp11.21 Hs.522666 Hs.555936 29

response to hypoxia

5-aminolevulinate synthase activity

protein binding

mitochondrion

mitochondrial inner membrane

mitochondrial matrix

porphyrin metabolic process

heme biosynthetic process

heme biosynthetic process

cellular iron ion homeostasis

acyltransferase activity

glycine binding

transferase activity, transferring nitrogenous groups

pyridoxal phosphate binding

erythrocyte differentiation

erythrocyte differentiation

oxygen homeostasis

tetrapyrrole biosynthetic process

hemoglobin biosynthetic process

coenzyme binding

Glycine, serine and threonine metabolism

Porphyrin and chlorophyll metabolism

Metabolic pathways

244861_at 0.268 6.374 3.136 6.705e-03 0.314 -2.274 ZNF527 zinc finger protein 527 19 42553898 AI679883 19q13.1 Hs.590940 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
230871_at 0.383 5.661 3.135 6.720e-03 0.314 -2.276 DHX30 DEAH (Asp-Glu-Ala-His) box polypeptide 30 3 47819402 H67762 3p21.31 Hs.517948 7

nucleotide binding

RNA binding

helicase activity

ATP binding

cytoplasm

mitochondrion

ATP-dependent helicase activity

hydrolase activity

mitochondrial nucleoid

 
209249_s_at -0.324 11.307 -3.134 6.728e-03 0.314 -2.277 GHITM growth hormone inducible transmembrane protein 10 85889164 AF131820 10q23.1 Hs.352656 15

molecular_function

biological_process

membrane

integral to membrane

 
1553062_at 0.487 5.203 3.134 6.733e-03 0.314 -2.278 MOGAT1 monoacylglycerol O-acyltransferase 1 2 223244700 NM_058165 2q36.1 Hs.344090 4

2-acylglycerol O-acyltransferase activity

diacylglycerol O-acyltransferase activity

membrane fraction

endoplasmic reticulum

glycerol metabolic process

diacylglycerol biosynthetic process

acyltransferase activity

lipid biosynthetic process

membrane

integral to membrane

transferase activity

 
239004_at 0.214 5.936 3.132 6.757e-03 0.315 -2.281 SQSTM1 sequestosome 1 5 179165993, 179166608, 179180447 AI041019 5q35 Hs.437277 100

protein kinase C binding

protein binding

nucleus

cytoplasm

late endosome

cytosol

cytosol

ubiquitin-dependent protein catabolic process

apoptosis

response to stress

immune response

intracellular signaling cascade

protein localization

zinc ion binding

endosome transport

cell differentiation

receptor tyrosine kinase binding

SH2 domain binding

SH2 domain binding

regulation of I-kappaB kinase/NF-kappaB cascade

regulation of I-kappaB kinase/NF-kappaB cascade

ubiquitin binding

ubiquitin binding

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

 
200954_at 0.293 8.103 3.132 6.760e-03 0.315 -2.282 ATP6V0C ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c 16 2503953 NM_001694 16p13.3 Hs.389107 23

protein binding

vacuole

ion transport

ATP synthesis coupled proton transport

proton transport

membrane

integral to membrane

proton-transporting V-type ATPase, V0 domain

interspecies interaction between organisms

proton-transporting ATP synthase complex, coupling factor F(o)

hydrogen ion transporting ATP synthase activity, rotational mechanism

proton-transporting ATPase activity, rotational mechanism

Oxidative phosphorylation

Metabolic pathways

Lysosome

Vibrio cholerae infection

Epithelial cell signaling in Helicobacter pylori infection

217978_s_at -0.282 7.870 -3.132 6.764e-03 0.315 -2.282 UBE2Q1 ubiquitin-conjugating enzyme E2Q family member 1 1 -152787674 NM_017582 1q21.3 Hs.607928 7

nucleotide binding

ubiquitin-protein ligase activity

protein binding

ATP binding

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

217935_s_at -0.386 8.709 -3.129 6.800e-03 0.315 -2.287 UQCC ubiquinol-cytochrome c reductase complex chaperone 20 -33353794 NM_018244 20q11.22 Hs.714359 16

cytoplasmic vesicle

 
202453_s_at -0.298 5.694 -3.129 6.800e-03 0.315 -2.287 GTF2H1 general transcription factor IIH, polypeptide 1, 62kDa 11 18300391 NM_005316 11p15.1-p14 Hs.577202 77

regulation of cyclin-dependent protein kinase activity

nucleotide-excision repair, DNA damage removal

protein binding

nucleus

nucleoplasm

holo TFIIH complex

DNA repair

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

response to DNA damage stimulus

RNA polymerase II carboxy-terminal domain kinase activity

general RNA polymerase II transcription factor activity

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

Basal transcription factors

Nucleotide excision repair

211992_at 0.301 9.142 3.129 6.806e-03 0.315 -2.288 WNK1 WNK lysine deficient protein kinase 1 12 732485 AI445745 12p13.3 Hs.709894 51

nucleotide binding

molecular_function

protein serine/threonine kinase activity

protein kinase inhibitor activity

protein binding

ATP binding

cytoplasm

cytoplasm

protein amino acid phosphorylation

ion transport

protein kinase cascade

biological_process

transferase activity

regulation of cellular process

 
203375_s_at -0.378 7.546 -3.128 6.817e-03 0.315 -2.289 TPP2 tripeptidyl peptidase II 13 102047286 NM_003291 13q32-q33 Hs.432424 23

aminopeptidase activity

serine-type endopeptidase activity

cytoplasm

proteolysis

peptidase activity

tripeptidyl-peptidase activity

 
207067_s_at 0.242 4.696 3.127 6.835e-03 0.315 -2.292 HDC histidine decarboxylase 15 -48321437 NM_002112 15q21-q22 Hs.1481 37

histidine decarboxylase activity

cellular amino acid and derivative metabolic process

histidine metabolic process

lyase activity

carboxylic acid metabolic process

pyridoxal phosphate binding

catecholamine biosynthetic process

Histidine metabolism

Biosynthesis of alkaloids derived from histidine and purine

Metabolic pathways

1552770_s_at 0.295 4.807 3.127 6.836e-03 0.315 -2.292 ZNF563 zinc finger protein 563 19 -12289305 NM_145276 19p13.2 Hs.663510 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
202829_s_at -0.377 7.722 -3.126 6.840e-03 0.315 -2.292 VAMP7 vesicle-associated membrane protein 7 X, Y 154764140, 57623340 NM_005638 Xq28 Yq12 Hs.24167 38

protein binding

protein binding

lysosomal membrane

endosome

endoplasmic reticulum

endoplasmic reticulum membrane

Golgi apparatus

ER to Golgi vesicle-mediated transport

vesicle fusion

phagocytosis, engulfment

endosome to lysosome transport

protein transport

membrane

integral to membrane

calcium ion-dependent exocytosis

SNARE complex

cytoplasmic vesicle

late endosome membrane

eosinophil degranulation

neutrophil degranulation

apical part of cell

phagocytic vesicle

SNARE interactions in vesicular transport

205657_at 0.252 6.751 3.126 6.846e-03 0.315 -2.293 HAAO 3-hydroxyanthranilate 3,4-dioxygenase 2 -42847732 NM_012205 2p21 Hs.368805 12

3-hydroxyanthranilate 3,4-dioxygenase activity

3-hydroxyanthranilate 3,4-dioxygenase activity

soluble fraction

cytoplasm

cytosol

cytosol

ferrous iron binding

electron carrier activity

response to zinc ion

oxidoreductase activity

pyridine nucleotide biosynthetic process

NAD metabolic process

quinolinate biosynthetic process

response to cadmium ion

metal ion binding

oxidation reduction

neuron maintenance

Tryptophan metabolism

Metabolic pathways

1559871_s_at 0.501 4.114 3.126 6.848e-03 0.315 -2.293 LOC100129129 hypothetical protein LOC100129129 8   BC038546 8p23.1 Hs.662094      
38037_at -0.490 6.686 -3.126 6.849e-03 0.315 -2.293 HBEGF heparin-binding EGF-like growth factor 5 -139692611 M60278 5q23 Hs.592942 Hs.799 98

receptor activity

epidermal growth factor receptor binding

extracellular region

extracellular space

plasma membrane

integral to plasma membrane

signal transduction

epidermal growth factor receptor signaling pathway

muscle organ development

regulation of heart contraction

growth factor activity

heparin binding

cell surface

wound healing, spreading of epidermal cells

positive regulation of smooth muscle cell proliferation

positive regulation of keratinocyte migration

ErbB signaling pathway

GnRH signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

200973_s_at -0.622 9.408 -3.126 6.850e-03 0.315 -2.294 TSPAN3 tetraspanin 3 15 -75125385 NM_005724 15q24.3 Hs.5062 Hs.716484 8

membrane

integral to membrane

 
218235_s_at -0.508 10.276 -3.125 6.852e-03 0.315 -2.294 UTP11L UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast) 1 38250970 NM_016037 1p34.3 Hs.472038 Hs.637686 11

protein binding

extracellular space

nucleus

nucleolus

cytoplasm

rRNA processing

induction of apoptosis

nervous system development

small-subunit processome

nerve growth factor receptor signaling pathway

 
202429_s_at -0.604 8.493 -3.125 6.857e-03 0.315 -2.294 PPP3CA protein phosphatase 3 (formerly 2B), catalytic subunit, alpha isoform 4 -102163609 AL353950 4q21-q24 Hs.435512 59

protein serine/threonine phosphatase activity

iron ion binding

calcium ion binding

calmodulin binding

nucleus

cytoplasm

calcineurin complex

protein amino acid dephosphorylation

zinc ion binding

hydrolase activity

MAPK signaling pathway

Calcium signaling pathway

Apoptosis

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Long-term potentiation

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

221713_s_at -0.493 6.499 -3.125 6.861e-03 0.315 -2.295 MAP6D1 MAP6 domain containing 1 3 -185016357 BC006434 3q27.1 Hs.478465 4

calmodulin binding

cytoplasm

Golgi apparatus

Golgi-associated vesicle

cis-Golgi network

cytoskeleton

negative regulation of microtubule depolymerization

microtubule binding

N-terminal peptidyl-L-cysteine N-palmitoylation

 
222588_s_at -0.341 6.003 -3.124 6.875e-03 0.316 -2.297 C11orf57 chromosome 11 open reading frame 57 11 111450177 AA024582 11q23.1 Hs.195060 6    
227219_x_at 0.302 7.879 3.123 6.890e-03 0.316 -2.299 MAP1LC3A microtubule-associated protein 1 light chain 3 alpha 20 32598352, 32610179 BE857601 20cen-q13 Hs.632273 29

autophagic vacuole formation

protein binding

cytoplasm

autophagic vacuole

cytosol

microtubule

autophagy

phosphatidylethanolamine binding

modification-dependent protein catabolic process

organelle membrane

cytoplasmic vesicle

 
220721_at 0.298 4.428 3.123 6.891e-03 0.316 -2.299 ZNF614 zinc finger protein 614 19 -57208389 NM_025040 19q13.41 Hs.292336 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
214987_at -0.278 5.482 -3.122 6.894e-03 0.316 -2.299 GAB1 GRB2-associated binding protein 1 4 144477432 AL049449 4q31.21 Hs.618456 Hs.80720 69

SH3/SH2 adaptor activity

protein binding

cytosol

epidermal growth factor receptor signaling pathway

cell proliferation

insulin receptor signaling pathway

ErbB signaling pathway

Neurotrophin signaling pathway

Renal cell carcinoma

1553960_at 0.576 7.328 3.122 6.902e-03 0.316 -2.300 SNX21 sorting nexin family member 21 20 43895876 CA447177 20q13.12 Hs.472854 8

protein binding

cell communication

protein transport

phosphoinositide binding

 
218168_s_at -0.428 11.345 -3.121 6.914e-03 0.316 -2.302 CABC1 chaperone, ABC1 activity of bc1 complex homolog (S. pombe) 1 225194560 NM_020247 1q42.13 Hs.118241 10

nucleotide binding

ATP binding

mitochondrion

cell death

kinase activity

transferase activity

 
207430_s_at -0.338 3.544 -3.121 6.920e-03 0.316 -2.303 MSMB microseminoprotein, beta- 10 51219558 NM_002443 10q11.2 Hs.255462 46

molecular_function

extracellular region

extracellular space

nucleus

biological_process

 
241899_at 0.310 5.396 3.120 6.922e-03 0.316 -2.303 LOC553103 hypothetical LOC553103     AA524418   Hs.633421 1    
212214_at -0.410 8.123 -3.120 6.932e-03 0.316 -2.304 OPA1 optic atrophy 1 (autosomal dominant) 3 194793626 BF439570 3q28-q29 Hs.594504 86

nucleotide binding

mitochondrial fission

magnesium ion binding

GTPase activity

GTP binding

mitochondrion

mitochondrial outer membrane

mitochondrial intermembrane space

apoptosis

mitochondrion organization

inner mitochondrial membrane organization

visual perception

mitochondrial fusion

membrane

integral to membrane

axon transport of mitochondrion

mitochondrial crista

dendrite

positive regulation of anti-apoptosis

response to stimulus

 
214901_at 0.387 5.371 3.118 6.956e-03 0.317 -2.307 ZNF8 zinc finger protein 8 19 63482129 AI671579 19q13.43 Hs.590941 Hs.713519 8

negative regulation of transcription from RNA polymerase II promoter

DNA binding

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

BMP signaling pathway

metal ion binding

 
209522_s_at 0.474 9.483 3.118 6.957e-03 0.317 -2.307 CRAT carnitine acetyltransferase 9 -130896895, -130896893 BC000723 9q34.1 Hs.12068 10

carnitine O-acetyltransferase activity

mitochondrion

mitochondrial inner membrane

peroxisome

endoplasmic reticulum

lipid metabolic process

fatty acid metabolic process

transport

acyltransferase activity

energy derivation by oxidation of organic compounds

membrane

transferase activity

 
210658_s_at -0.341 5.965 -3.117 6.966e-03 0.317 -2.309 GGA2 golgi associated, gamma adaptin ear containing, ARF binding protein 2 16 -23383143 BC000284 16p12 Hs.460336 37

protein binding

intracellular

endosome

trans-Golgi network

intracellular protein transport

membrane

vesicle-mediated transport

membrane coat

clathrin adaptor complex

ADP-ribosylation factor binding

Lysosome

227100_at -0.478 5.464 -3.116 6.979e-03 0.317 -2.310 B3GALTL beta 1,3-galactosyltransferase-like 13 30672111 AI569766 13q12.3 Hs.13205 11

endoplasmic reticulum

carbohydrate metabolic process

fucose metabolic process

membrane

integral to membrane

transferase activity, transferring glycosyl groups

 
37950_at -0.414 7.856 -3.115 6.994e-03 0.317 -2.312 PREP prolyl endopeptidase 6 -105832198 X74496 6q22 Hs.436564 26

serine-type endopeptidase activity

cytoplasm

proteolysis

peptidase activity

 
228482_at 0.396 3.801 3.115 7.000e-03 0.317 -2.313 CDRT4 CMT1A duplicated region transcript 4 17 -15280062 AV702789 17p12 Hs.164595 4    
223589_at 0.322 5.059 3.114 7.014e-03 0.317 -2.315 ZNF416 zinc finger protein 416 19 -62774745 BC000130 19q13.4 Hs.247711 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
202816_s_at -0.286 4.986 -3.114 7.015e-03 0.317 -2.315 SS18 synovial sarcoma translocation, chromosome 18 18 -21850214 AW292882 18q11.2 Hs.404263 32

nucleus

 
223041_at -0.414 7.409 -3.113 7.028e-03 0.317 -2.316 CD99L2 CD99 molecule-like 2 X -149685466 AL136580 Xq28 Hs.522805 8

protein binding

plasma membrane

cell adhesion

integral to membrane

cell junction

 
222808_at -0.365 4.384 -3.111 7.051e-03 0.317 -2.319 ALG13 asparagine-linked glycosylation 13 homolog (S. cerevisiae) X 110811068 BC005336 Xq23 Hs.443061 14

N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity

endoplasmic reticulum

carbohydrate metabolic process

transferase activity, transferring hexosyl groups

carbohydrate binding

lipid glycosylation

N-Glycan biosynthesis

Metabolic pathways

225131_at -0.524 7.856 -3.111 7.053e-03 0.317 -2.320 ZRANB1 zinc finger, RAN-binding domain containing 1 10 126620681 H60265 10q26.13 Hs.595158 3

ubiquitin-protein ligase activity

protein binding

intracellular

nucleus

cytoplasm

peptidase activity

cysteine-type peptidase activity

zinc ion binding

modification-dependent protein catabolic process

positive regulation of Wnt receptor signaling pathway

metal ion binding

 
242272_at 0.309 5.954 3.110 7.074e-03 0.317 -2.322 ZNF785 zinc finger protein 785 16 -30499494 AI375066 16p11.2 Hs.513509 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
227761_at 0.396 5.516 3.109 7.080e-03 0.317 -2.323 MYO5A myosin VA (heavy chain 12, myoxin) 15 -50386774 AW235548 15q21 Hs.21213 Hs.596221 47

microfilament motor activity

nucleotide binding

ruffle

calmodulin binding

ATP binding

cytoplasm

transport

myosin complex

actin filament-based movement

growth cone

neuron projection

actin filament binding

 
204308_s_at 0.258 6.888 3.109 7.085e-03 0.317 -2.324 TECPR2 tectonin beta-propeller repeat containing 2 14 101899130 NM_014844 14q32.31 Hs.195667 3    
224276_at 0.352 3.695 3.109 7.090e-03 0.317 -2.324 ZNF33A zinc finger protein 33A 10 38339583 AF063599 10p11.2 Hs.435774 8

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
222126_at 0.244 5.403 3.109 7.093e-03 0.317 -2.325 AGFG2 ArfGAP with FG repeats 2 7 99974769 AI247494 7q22.1 Hs.521083 9

molecular_function

cellular_component

ARF GTPase activator activity

biological_process

zinc ion binding

regulation of ARF GTPase activity

metal ion binding

 
209495_at 0.294 6.205 3.109 7.093e-03 0.317 -2.325 CEP250 centrosomal protein 250kDa 20 33506563 AF022655 20q11.22-q12 Hs.443976 14

mitotic cell cycle

cytoplasm

centriole

cilium

microtubule basal body

protein C-terminus binding

protein localization

protein kinase binding

regulation of centriole-centriole cohesion

protein complex

perinuclear region of cytoplasm

 
207705_s_at 0.607 6.329 3.108 7.099e-03 0.317 -2.326 NINL ninein-like 20 -25381337 NM_025176 20p11.22-p11.1 Hs.696157 13

calcium ion binding

cytoplasm

centrosome

microtubule

 
201670_s_at 0.487 6.420 3.107 7.114e-03 0.317 -2.327 MARCKS myristoylated alanine-rich protein kinase C substrate 6 114285219 M68956 6q22.2 Hs.519909 Hs.712721 41

protein kinase C binding

calmodulin binding

cytoplasm

centrosome

cell cortex

actin cytoskeleton

membrane

germinal vesicle

actin filament binding

Fc gamma R-mediated phagocytosis

212861_at -0.329 6.426 -3.107 7.115e-03 0.317 -2.328 MFSD5 major facilitator superfamily domain containing 5 12 51932146 BF690150 12q13.13 Hs.654660 7

transport

membrane

integral to membrane

 
223490_s_at -0.351 5.070 -3.107 7.119e-03 0.317 -2.328 EXOSC3 exosome component 3 9 -37770307, -37770307 AF281132 9p11 Hs.602571 Hs.713483 12

3'-5'-exoribonuclease activity

nuclear exosome (RNase complex)

cytoplasmic exosome (RNase complex)

RNA binding

exonuclease activity

protein binding

nucleus

nucleolus

cytoplasm

rRNA processing

hydrolase activity

RNA degradation

213178_s_at 0.493 6.065 3.106 7.133e-03 0.318 -2.330 MAPK8IP3 mitogen-activated protein kinase 8 interacting protein 3 16 1696221 AB028989 16p13.3 Hs.207763 23

Golgi membrane

MAP-kinase scaffold activity

cytoplasm

vesicle-mediated transport

kinesin binding

protein kinase binding

regulation of JNK cascade

MAPK signaling pathway

204118_at 0.398 4.535 3.106 7.136e-03 0.318 -2.330 CD48 CD48 molecule 1 -158915159 NM_001778 1q21.3-q22 Hs.243564 35

protein binding

plasma membrane

integral to plasma membrane

defense response

anchored to membrane

membrane raft

Natural killer cell mediated cytotoxicity

213380_x_at 0.305 5.443 3.105 7.151e-03 0.318 -2.332 MSTP9 macrophage stimulating, pseudogene 9 1 -16953988 AA911235 1p36.13 Hs.349110 Hs.655432 2

serine-type endopeptidase activity

extracellular region

proteolysis

peptidase activity

 
230822_at 0.296 4.496 3.105 7.152e-03 0.318 -2.332 TMEM61 transmembrane protein 61 1 55219052 AI766925 1p32.3 Hs.663950 3

membrane

integral to membrane

 
230066_at 0.277 3.507 3.103 7.170e-03 0.318 -2.334 SNX25 sorting nexin 25 4 186368277 AW134876 4q35.1 Hs.369091 4

signal transducer activity

protein binding

cell communication

protein transport

phosphoinositide binding

 
207213_s_at -0.658 7.347 -3.103 7.178e-03 0.318 -2.336 USP2 ubiquitin specific peptidase 2 11 -118731134, -118731134 NM_004205 11q23.3 Hs.524085 15

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

protein binding

cytoplasm

plasma membrane

ubiquitin-dependent protein catabolic process

peptidase activity

 
226287_at 0.646 4.718 3.102 7.187e-03 0.318 -2.337 CCDC34 coiled-coil domain containing 34 11 -27326994, -27316636 AI458313 11p14.1 Hs.143733 4    
235049_at 0.412 5.891 3.101 7.200e-03 0.318 -2.338 ADCY1 adenylate cyclase 1 (brain) 7 45580649 AA021120 7p13-p12 Hs.192215 24

nucleotide binding

magnesium ion binding

calmodulin binding

ATP binding

cAMP biosynthetic process

long-term memory

calcium- and calmodulin-responsive adenylate cyclase activity

hormone-mediated signaling

membrane

integral to membrane

Purine metabolism

Calcium signaling pathway

Chemokine signaling pathway

Vascular smooth muscle contraction

Gap junction

Long-term potentiation

GnRH signaling pathway

Melanogenesis

214279_s_at -1.204 9.481 -3.100 7.219e-03 0.319 -2.340 NDRG2 NDRG family member 2 14 -20554761, -20554761 W74452 14q11.2 Hs.525205 42

molecular_function

nucleus

cytoplasm

Golgi apparatus

centrosome

cytosol

multicellular organismal development

nervous system development

cell differentiation

perinuclear region of cytoplasm

 
230292_at 0.466 6.050 3.099 7.232e-03 0.319 -2.342 LOC100131993 similar to hCG2020760 13   AA868809 13q14.2 Hs.709358      
227945_at -0.785 7.217 -3.096 7.278e-03 0.320 -2.348 TBC1D1 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 4 37569114 BE882538 4p14 Hs.176503 15

GTPase activator activity

Rab GTPase activator activity

intracellular

nucleus

regulation of Rab GTPase activity

 
203666_at 0.575 7.941 3.096 7.281e-03 0.320 -2.348 CXCL12 chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1) 10 -44192515, -44191370, -44185610 NM_000609 10q11.1 Hs.522891 435

signal transducer activity

extracellular region

extracellular space

cellular calcium ion homeostasis

chemotaxis

immune response

cell adhesion

signal transduction

G-protein coupled receptor protein signaling pathway

chemokine activity

blood circulation

regulation of actin polymerization or depolymerization

growth factor activity

response to virus

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

Axon guidance

Leukocyte transendothelial migration

1555350_at -0.293 3.626 -3.096 7.282e-03 0.320 -2.348 PPHLN1 periphilin 1 12 41006213, 41006213, 41006213, 41006213 AY039238 12q12 Hs.444157 13

nucleus

cytoplasm

keratinization

 
227951_s_at 0.487 5.800 3.096 7.285e-03 0.320 -2.349 FAM98C family with sequence similarity 98, member C 19 43585614 AW338561 19q13.2 Hs.355162 2    
202588_at -0.344 8.800 -3.095 7.288e-03 0.320 -2.349 AK1 adenylate kinase 1 9 -129668579 NM_000476 9q34.1 Hs.175473 24

nucleotide binding

adenylate kinase activity

protein binding

ATP binding

nucleus

cytoplasm

mitochondrion

cytosol

plasma membrane

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

cell cycle arrest

transferase activity

nucleoside kinase activity

ATP metabolic process

Purine metabolism

Metabolic pathways

218919_at -0.333 7.043 -3.095 7.301e-03 0.320 -2.351 ZFAND1 zinc finger, AN1-type domain 1 8 -82776512 NM_024699 8q21.13 Hs.655453 4

zinc ion binding

metal ion binding

 
1552739_s_at -0.262 5.334 -3.093 7.321e-03 0.320 -2.353 ST7L suppression of tumorigenicity 7 like 1 -112885935, -112867663 NM_138729 1p13.2 Hs.201921 6

membrane

integral to membrane

 
205588_s_at 0.468 4.110 3.091 7.359e-03 0.321 -2.358 FGFR1OP FGFR1 oncogene partner 6 167332805 NM_007045 6q27 Hs.487175 14

centrosome

positive regulation of cell proliferation

microtubule anchoring

 
205388_at -0.788 13.323 -3.090 7.361e-03 0.321 -2.358 TNNC2 troponin C type 2 (fast) 20 -43885261 NM_003279 20q12-q13.11 Hs.182421 12

skeletal muscle contraction

actin binding

calcium ion binding

troponin complex

regulation of muscle contraction

Calcium signaling pathway

201095_at 0.388 5.010 3.090 7.373e-03 0.321 -2.359 DAP death-associated protein 5 -10732341 NM_004394 5p15.2 Hs.75189 9

apoptosis

induction of apoptosis by extracellular signals

 
202315_s_at 0.461 4.790 3.090 7.375e-03 0.321 -2.360 BCR breakpoint cluster region 22 21852551 NM_004327 22q11 22q11.23 Hs.517461 Hs.715409 201

nucleotide binding

protein serine/threonine kinase activity

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

GTPase activator activity

ATP binding

intracellular

protein amino acid phosphorylation

intracellular signaling cascade

kinase activity

transferase activity

regulation of Rho protein signal transduction

Pathways in cancer

Chronic myeloid leukemia

227409_at -0.499 6.106 -3.085 7.447e-03 0.323 -2.368 PPP1R3E protein phosphatase 1, regulatory (inhibitor) subunit 3E 14 -22834952 AA167748 14q11.2 Hs.601513 Hs.672733 3

carbohydrate metabolic process

glycogen metabolic process

 
223000_s_at 0.411 6.332 3.085 7.450e-03 0.323 -2.369 F11R F11 receptor 1 -159231624 AF172398 1q21.2-q21.3 Hs.517293 63

protein binding

plasma membrane

cell-cell junction

tight junction

inflammatory response

cell adhesion

integral to membrane

epithelial cell differentiation

interspecies interaction between organisms

Cell adhesion molecules (CAMs)

Tight junction

Leukocyte transendothelial migration

Epithelial cell signaling in Helicobacter pylori infection

201779_s_at -0.447 9.059 -3.084 7.463e-03 0.323 -2.370 RNF13 ring finger protein 13 3 151013164 AF070558 3q25.1 Hs.12333 Hs.712766 10

protein binding

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
222705_s_at 0.383 3.865 3.083 7.468e-03 0.323 -2.371 SLC25A15 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 13 40261546 BC002702 13q14 Hs.646645 Hs.655240 17

urea cycle

L-ornithine transmembrane transporter activity

mitochondrial ornithine transport

transporter activity

binding

mitochondrion

mitochondrial inner membrane

cellular amino acid metabolic process

transport

membrane

integral to membrane

 
214838_at 0.340 5.580 3.083 7.473e-03 0.323 -2.372 SFT2D2 SFT2 domain containing 2 1 166461878 AL035297 1q24.2 Hs.645435 7

protein transport

membrane

integral to membrane

 
205040_at 0.464 4.148 3.083 7.474e-03 0.323 -2.372 ORM1 orosomucoid 1 9 116125123 NM_000607 9q31-q32 Hs.522356 55

regulation of immune system process

protein binding

extracellular region

extracellular space

acute-phase response

inflammatory response

 
205216_s_at -0.264 4.469 -3.083 7.475e-03 0.323 -2.372 APOH apolipoprotein H (beta-2-glycoprotein I) 17 -61638608 NM_000042 17q23-qter Hs.445358 129

negative regulation of endothelial cell proliferation

glycoprotein binding

phospholipid binding

extracellular region

extracellular space

triglyceride metabolic process

blood coagulation, intrinsic pathway

heparin binding

cell surface

negative regulation of endothelial cell migration

negative regulation of angiogenesis

positive regulation of blood coagulation

negative regulation of blood coagulation

organ regeneration

plasminogen activation

negative regulation of myeloid cell apoptosis

triglyceride transport

very-low-density lipoprotein particle

high-density lipoprotein particle

negative regulation of smooth muscle cell apoptosis

chylomicron

eukaryotic cell surface binding

positive regulation of lipoprotein lipase activity

negative regulation of fibrinolysis

lipoprotein lipase activator activity

 
209943_at -0.833 5.450 -3.083 7.482e-03 0.323 -2.373 FBXL4 F-box and leucine-rich repeat protein 4 6 -99428321 AF176699 6q16.1-q16.3 Hs.536850 6

ubiquitin ligase complex

nucleus

cytoplasm

ubiquitin-dependent protein catabolic process

 
233461_x_at 0.599 5.286 3.082 7.488e-03 0.323 -2.373 ZNF226 zinc finger protein 226 19 49361088, 49361088, 49361096, 49361156 AK023091 19q13.2 Hs.145956 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
229262_at -0.249 5.139 -3.082 7.489e-03 0.323 -2.373 LRRC68 leucine rich repeat containing 68 19   AW027563 19q13.32 Hs.285363 3    
226587_at 0.854 7.172 3.081 7.500e-03 0.323 -2.375 SNRPN small nuclear ribonucleoprotein polypeptide N 15 22619886, 22652790, 22751227 BE783065 15q11.2 Hs.555970 Hs.564847 Hs.578619 Hs.585703 Hs.592473 Hs.621316 Hs.632166 47

RNA binding

nucleus

spliceosomal complex

RNA splicing

small nuclear ribonucleoprotein complex

identical protein binding

 
201686_x_at -0.281 5.513 -3.080 7.521e-03 0.324 -2.377 API5 apoptosis inhibitor 5 11 43290080 AF229254 11p11.2 Hs.435771 15

binding

nucleus

spliceosomal complex

cytoplasm

apoptosis

anti-apoptosis

anti-apoptosis

anti-apoptosis

fibroblast growth factor binding

 
226433_at -0.921 7.026 -3.080 7.527e-03 0.324 -2.378 RNF157 ring finger protein 157 17 -71650128 BF056204 17q25.1 Hs.500643 3

protein binding

zinc ion binding

metal ion binding

 
204572_s_at -0.357 5.736 -3.078 7.550e-03 0.324 -2.381 PIN4 protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) X 71318250 NM_006223 Xq13 Hs.655623 13

peptidyl-prolyl cis-trans isomerase activity

nucleolus

cytoplasm

mitochondrion

mitochondrial matrix

spindle

protein folding

isomerase activity

 
205589_at 0.373 12.188 3.078 7.552e-03 0.324 -2.381 MYL3 myosin, light chain 3, alkali; ventricular, skeletal, slow 3 -46874360 NM_000258 3p21.3-p21.2 Hs.517939 27

regulation of the force of heart contraction

motor activity

actin monomer binding

calcium ion binding

muscle myosin complex

regulation of striated muscle contraction

structural constituent of muscle

myosin complex

A band

I band

myosin II heavy chain binding

positive regulation of ATPase activity

ventricular cardiac muscle morphogenesis

cardiac muscle contraction

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

211947_s_at -0.327 4.975 -3.078 7.553e-03 0.324 -2.381 BAT2D1 BAT2 domain containing 1 1 169721289 AI359472 1q23.3 Hs.494614 5    
209331_s_at -0.373 5.527 -3.077 7.562e-03 0.324 -2.382 MAX MYC associated factor X 14 -64620214, -64614273, -64611597, -64542644 AA723514 14q23 Hs.285354 Hs.712926 56

transcription factor activity

transcription coactivator activity

protein binding

nucleus

cytoplasm

transcription from RNA polymerase II promoter

regulation of transcription

MAPK signaling pathway

Pathways in cancer

Small cell lung cancer

213982_s_at 0.647 4.676 3.077 7.571e-03 0.324 -2.383 RABGAP1L RAB GTPase activating protein 1-like 1 172395256, 173111306 BG107203 1q24 Hs.585378 9

GTPase activator activity

Rab GTPase activator activity

intracellular

regulation of Rab GTPase activity

 
226019_at -0.509 7.391 -3.076 7.580e-03 0.324 -2.384 OMA1 OMA1 homolog, zinc metallopeptidase (S. cerevisiae) 1 -58718978 AI927931 1p32.2-p32.1 Hs.425769 4

metalloendopeptidase activity

mitochondrion

proteolysis

peptidase activity

zinc ion binding

membrane

integral to membrane

metal ion binding

 
219263_at -0.613 6.831 -3.076 7.580e-03 0.324 -2.384 RNF128 ring finger protein 128 X 105823723, 105856549 NM_024539 Xq22.3 Hs.496542 13

protein binding

cytoplasm

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

metal ion binding

perinuclear region of cytoplasm

 
203404_at 0.394 6.255 3.076 7.582e-03 0.324 -2.384 ARMCX2 armadillo repeat containing, X-linked 2 X -100796925 NM_014782 Xq21.33-q22.2 Hs.48924 7

binding

membrane

integral to membrane

 
224751_at -0.465 8.277 -3.076 7.583e-03 0.324 -2.385 PL-5283 PL-5283 protein 7 134997760 BE738276 7q33 Hs.200022 3    
201241_at -0.429 9.959 -3.076 7.588e-03 0.324 -2.385 DDX1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 2 15649220 NM_004939 2p24 Hs.440599 24

nucleotide binding

spliceosome assembly

RNA binding

RNA helicase activity

protein binding

ATP binding

cellular_component

regulation of translational initiation

multicellular organismal development

ATP-dependent helicase activity

hydrolase activity

ribonucleoprotein complex

 
1560390_s_at 0.290 3.039 3.075 7.596e-03 0.324 -2.386 LOC284440 hypothetical LOC284440 19 -19728182 BI599587 19p13.11 Hs.665307 4    
205931_s_at 0.444 4.227 3.074 7.622e-03 0.324 -2.389 CREB5 cAMP responsive element binding protein 5 7 28305464, 28418668, 28441758, 28692245 NM_004904 7p15.1 Hs.437075 10

transcription factor activity

intracellular

nucleus

transcription from RNA polymerase II promoter

zinc ion binding

sequence-specific DNA binding

positive regulation of transcription, DNA-dependent

metal ion binding

protein dimerization activity

Huntington's disease

Prostate cancer

235754_at 0.322 4.308 3.072 7.649e-03 0.325 -2.392 HFE hemochromatosis 6 26195487 AA088873 6p21.3 Hs.233325 592

antigen processing and presentation of peptide antigen via MHC class I

iron ion binding

protein binding

cytoplasm

early endosome

plasma membrane

integral to plasma membrane

protein complex assembly

ion transport

iron ion transport

cellular iron ion homeostasis

receptor-mediated endocytosis

immune response

antigen processing and presentation

cytoplasmic vesicle

MHC class I protein complex

apical part of cell

basal part of cell

perinuclear region of cytoplasm

recycling endosome

 
203565_s_at -0.371 7.850 -3.071 7.656e-03 0.325 -2.393 MNAT1 menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis) 14 60271222 NM_002431 14q23 Hs.509523 66

regulation of cyclin-dependent protein kinase activity

nucleotide-excision repair, DNA damage removal

nucleus

nucleoplasm

cytoplasm

DNA repair

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

protein complex assembly

apoptosis

cell cycle

adult heart development

zinc ion binding

cell proliferation

ventricular system development

multicellular organismal metabolic process

positive regulation of transcription from RNA polymerase II promoter

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

protein N-terminus binding

regulation of catalytic activity

response to calcium ion

Nucleotide excision repair

225173_at -0.415 6.987 -3.071 7.660e-03 0.325 -2.394 ARHGAP18 Rho GTPase activating protein 18 6 -129939932 BE501862 6q22.33 Hs.486458 Hs.708586 7

GTPase activator activity

protein binding

intracellular

signal transduction

 
201017_at -0.762 8.116 -3.070 7.676e-03 0.325 -2.396 EIF1AX eukaryotic translation initiation factor 1A, X-linked X -20052556 BG149698 Xp22.12 Hs.522590 17

RNA binding

translation initiation factor activity

cytoplasm

cytosol

translational initiation

 
217783_s_at -0.295 8.135 -3.070 7.680e-03 0.325 -2.396 YPEL5 yippee-like 5 (Drosophila) 2 30223253 NM_016061 2p23.1 Hs.515890 6    
1556121_at -0.636 6.152 -3.069 7.699e-03 0.325 -2.398 NAP1L1 nucleosome assembly protein 1-like 1 12 -74724938 AK021751 12q21.2 Hs.524599 Hs.695185 17

protein binding

nucleus

chromatin assembly complex

DNA replication

nucleosome assembly

positive regulation of cell proliferation

melanosome

 
224856_at -1.002 8.312 -3.068 7.704e-03 0.325 -2.399 FKBP5 FK506 binding protein 5 6 -35656311, -35649339, -35649339, -35649339 W86302 6p21.3-p21.2 Hs.407190 50

peptidyl-prolyl cis-trans isomerase activity

FK506 binding

nucleus

cytoplasm

protein folding

isomerase activity

heat shock protein binding

 
214693_x_at 0.520 5.981 3.068 7.706e-03 0.325 -2.399 NBPF10 neuroblastoma breakpoint family, member 10 1 144004727 BE732345 1q21.1 Hs.515947 6

cytoplasm

 
230595_at 0.479 5.731 3.066 7.738e-03 0.326 -2.403 LOC572558 hypothetical locus LOC572558 9 -70159930 BF677651 9q13 Hs.552819 Hs.9015 2    
227199_at 0.465 6.555 3.066 7.743e-03 0.326 -2.403 DIP2A DIP2 disco-interacting protein 2 homolog A (Drosophila) 21 46703289, 46703289, 46703289, 46703289, 46703289 AW027812 21q22.3 Hs.189585 11

catalytic activity

nucleus

multicellular organismal development

transcription factor binding

metabolic process

 
1554483_at 0.320 6.345 3.066 7.748e-03 0.326 -2.404 TMEM37 transmembrane protein 37 2 119905915 AF361356 2q14.2 Hs.26216 3

voltage-gated ion channel activity

calcium channel activity

calcium ion binding

ion transport

calcium ion transport

membrane

integral to membrane

 
214992_s_at -0.485 5.483 -3.065 7.761e-03 0.326 -2.405 DNASE2 deoxyribonuclease II, lysosomal 19 -12847024 AD000092 19p13.2 Hs.118243 27

DNA binding

endodeoxyribonuclease activity

deoxyribonuclease II activity

protein binding

lysosome

DNA catabolic process

apoptosis

multicellular organismal development

hydrolase activity

erythrocyte differentiation

Lysosome

204685_s_at -1.250 7.048 -3.064 7.777e-03 0.326 -2.407 ATP2B2 ATPase, Ca++ transporting, plasma membrane 2 3 -10340706 R52647 3p25.3 Hs.268942 30

nucleotide binding

magnesium ion binding

calcium-transporting ATPase activity

calcium ion binding

calmodulin binding

ATP binding

cytoplasm

plasma membrane

ATP biosynthetic process

cation transport

calcium ion transport

sensory perception of sound

metabolic process

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

neuron differentiation

Calcium signaling pathway

221974_at 0.851 8.224 3.064 7.778e-03 0.326 -2.407 IPW imprinted in Prader-Willi syndrome (non-protein coding) 15 22912784 AW770748 15q11-q12 Hs.555970 3    
235863_at -0.366 6.936 -3.061 7.814e-03 0.328 -2.411 JSRP1 junctional sarcoplasmic reticulum protein 1 19 -2203251 AI805145 19p13.3 Hs.712901 4

membrane

sarcoplasmic reticulum membrane

 
243980_at 0.247 4.330 3.061 7.817e-03 0.328 -2.412 ZNF594 zinc finger protein 594 17 -5023554 AW978739 17p13 Hs.658402 5

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
1569906_s_at -0.325 6.371 -3.061 7.828e-03 0.328 -2.413 PHF20 PHD finger protein 20 20 33823336 BC015538 20q11.22-q11.23 Hs.517044 11

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
206996_x_at -0.281 9.524 -3.060 7.839e-03 0.328 -2.414 CACNB1 calcium channel, voltage-dependent, beta 1 subunit 17 -34586914, -34583234 NM_000723 17q21-q22 Hs.635 18

voltage-gated ion channel activity

voltage-gated calcium channel activity

calcium ion binding

plasma membrane

voltage-gated calcium channel complex

ion transport

calcium ion transport

MAPK signaling pathway

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

223136_at 0.651 7.015 3.056 7.893e-03 0.329 -2.420 AIG1 androgen-induced 1 6 143423715 AF151861 6q24.2 Hs.567501 8

membrane

integral to membrane

 
208091_s_at -0.371 8.084 -3.056 7.893e-03 0.329 -2.420 VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 7 -55505799 NM_030796 7p11.2 Hs.488307 17    
223822_at 0.456 4.359 3.056 7.904e-03 0.329 -2.422 SUSD4 sushi domain containing 4 1 -221474874, -221460783 BC004888 1q41 Hs.497841 4

membrane

integral to membrane

 
1558723_at 0.242 3.250 3.056 7.907e-03 0.329 -2.422 LOC284014 hypothetical protein LOC284014 17   AK095567 17p13.3 Hs.131035 1    
205730_s_at 0.580 6.986 3.055 7.910e-03 0.329 -2.422 ABLIM3 actin binding LIM protein family, member 3 5 148501246 NM_014945 5q32 Hs.49688 15

actin binding

cytoplasm

cytoskeleton organization

zinc ion binding

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

Axon guidance

221073_s_at 0.275 6.206 3.055 7.915e-03 0.329 -2.423 NOD1 nucleotide-binding oligomerization domain containing 1 7 -30430667 NM_006092 7p15-p14 Hs.405153 72

nucleotide binding

ATP binding

intracellular

cytoplasm

induction of apoptosis

activation of caspase activity

inflammatory response

intracellular signaling cascade

caspase activator activity

detection of bacterium

positive regulation of interleukin-6 production

positive regulation of tumor necrosis factor production

positive regulation of stress-activated MAPK cascade

interleukin-8 biosynthetic process

identical protein binding

peptidoglycan binding

regulation of apoptosis

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of JNK cascade

CARD domain binding

defense response to Gram-positive bacterium

protein oligomerization

positive regulation of ERK1 and ERK2 cascade

Epithelial cell signaling in Helicobacter pylori infection

209090_s_at -0.479 9.676 -3.055 7.923e-03 0.329 -2.424 SH3GLB1 SH3-domain GRB2-like endophilin B1 1 86942844 AL049597 1p22 Hs.136309 28

protein insertion into mitochondrial membrane during induction of apoptosis

fatty acid binding

protein binding

nucleus

cytoplasm

mitochondrion

mitochondrial outer membrane

microsome

Golgi apparatus

phosphatidic acid biosynthetic process

apoptosis

anti-apoptosis

phospholipid biosynthetic process

membrane

lysophosphatidic acid acyltransferase activity

protein homodimerization activity

protein complex

'de novo' posttranslational protein folding

Endocytosis

240459_at -0.276 3.787 -3.054 7.927e-03 0.329 -2.424 YTHDC1 YTH domain containing 1 4 -68858699 AW467048 4q13.2 Hs.175955 18

nucleus

mRNA processing

RNA splicing

 
222725_s_at -0.576 7.474 -3.051 7.986e-03 0.330 -2.431 PALMD palmdelphin 1 99884018 AI082747 1p22-p21 Hs.483993 7

cytoplasm

regulation of cell shape

membrane

 
204159_at -0.651 7.084 -3.051 7.988e-03 0.330 -2.431 CDKN2C cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) 1 51206954, 51208229 NM_001262 1p32 Hs.525324 Hs.716664 45

regulation of cyclin-dependent protein kinase activity

G1/S transition of mitotic cell cycle

cyclin-dependent protein kinase inhibitor activity

protein binding

nucleus

cytoplasm

induction of apoptosis

cell cycle

cell cycle arrest

negative regulation of cell proliferation

protein kinase binding

negative regulation of cell growth

negative regulation of phosphorylation

oligodendrocyte differentiation

Cell cycle

229820_at 0.474 5.322 3.050 7.994e-03 0.330 -2.432 LOC440993 hypothetical LOC440993 3   BF509179 3q29 Hs.709411      
209189_at -1.321 5.703 -3.050 7.995e-03 0.330 -2.432 FOS FBJ murine osteosarcoma viral oncogene homolog 14 74815233 BC004490 14q24.3 Hs.707896 207

double-stranded DNA binding

transcription factor activity

specific RNA polymerase II transcription factor activity

nucleus

transcription factor complex

nucleolus

DNA methylation

inflammatory response

transforming growth factor beta receptor signaling pathway

nervous system development

promoter binding

cellular response to extracellular stimulus

cellular response to reactive oxygen species

response to drug

positive regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

protein heterodimerization activity

SMAD protein signal transduction

R-SMAD binding

MAPK signaling pathway

Toll-like receptor signaling pathway

T cell receptor signaling pathway

B cell receptor signaling pathway

Pathways in cancer

Colorectal cancer

238732_at -0.412 3.122 -3.049 8.009e-03 0.331 -2.433 COL24A1 collagen, type XXIV, alpha 1 1 -85967503 AI631241 1p22.3 Hs.659516 3

extracellular matrix structural constituent

collagen

cell adhesion

 
35436_at -0.270 7.607 -3.046 8.068e-03 0.332 -2.440 GOLGA2 golgi autoantigen, golgin subfamily a, 2 9 -130057928 L06147 9q34.11 Hs.155827 45

protein binding

Golgi apparatus

membrane

 
208149_x_at 0.472 5.717 3.045 8.079e-03 0.332 -2.441 DDX11 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae) 12 31118045 NM_030653 12p11 Hs.443960 13

mitotic sister chromatid segregation

S phase of mitotic cell cycle

G2/M transition of mitotic cell cycle

nucleotide binding

DNA binding

RNA binding

ATP-dependent DNA helicase activity

ATP binding

nucleus

nucleolus

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

cell cycle

positive regulation of cell proliferation

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

 
227646_at 0.524 6.777 3.044 8.090e-03 0.332 -2.442 EBF1 early B-cell factor 1 5 -158055500 BG435302 5q34 Hs.573143 21

DNA binding

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

transcription regulator activity

metal ion binding

 
238594_x_at 0.328 7.318 3.043 8.115e-03 0.333 -2.445 DUSP8 dual specificity phosphatase 8 11 -1531856 AI864441 11p15.5 Hs.41688 6

inactivation of MAPK activity

protein tyrosine phosphatase activity

nucleus

cytoplasm

protein amino acid dephosphorylation

hydrolase activity

MAP kinase tyrosine/serine/threonine phosphatase activity

MAPK signaling pathway

238116_at 0.240 2.408 3.043 8.120e-03 0.333 -2.446 DYNLRB2 dynein, light chain, roadblock-type 2 16 79132354 AW959427 16q23.3 Hs.98849 5

microtubule motor activity

protein binding

cytoplasm

cytoplasmic dynein complex

microtubule

microtubule-based movement

 
243309_at -0.547 5.284 -3.042 8.123e-03 0.333 -2.446 FLJ27352 hypothetical LOC145788 15   AA398658 15q21.3 Hs.97300      
225607_at -0.341 8.256 -3.042 8.135e-03 0.333 -2.447 CCDC43 coiled-coil domain containing 43 17 -40110330 AI948491 17q21.31 Hs.579115 2    
209783_at -0.223 5.660 -3.041 8.155e-03 0.333 -2.450 DBP D site of albumin promoter (albumin D-box) binding protein 19 -53825628 D28468 19q13.3 Hs.414480 Hs.528006 35

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

regulation of cell proliferation

sequence-specific DNA binding

protein dimerization activity

rhythmic process

 
218210_at 0.378 6.582 3.040 8.160e-03 0.333 -2.450 FN3KRP fructosamine 3 kinase related protein 17 78267870 NM_024619 17q25.3 Hs.31431 12

kinase activity

transferase activity

 
205914_s_at -0.254 4.007 -3.039 8.173e-03 0.333 -2.452 GRIN1 glutamate receptor, ionotropic, N-methyl D-aspartate 1 9 139153429 NM_007327 9q34.3 Hs.558334 119

magnesium ion binding

receptor activity

N-methyl-D-aspartate selective glutamate receptor activity

ion channel activity

extracellular-glutamate-gated ion channel activity

calcium channel activity

calcium ion binding

calmodulin binding

plasma membrane

integral to plasma membrane

cation transport

synaptic transmission

synaptic vesicle

visual learning

postsynaptic density

glycine binding

glycine binding

glutamate binding

N-methyl-D-aspartate selective glutamate receptor complex

synaptosome

cell junction

dendrite

ionotropic glutamate receptor signaling pathway

glutamate receptor binding

regulation of membrane potential

synapse

postsynaptic membrane

response to ethanol

positive regulation of transcription from RNA polymerase II promoter

calcium ion homeostasis

regulation of excitatory postsynaptic membrane potential

Calcium signaling pathway

Neuroactive ligand-receptor interaction

Long-term potentiation

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

Huntington's disease

219601_s_at -0.249 2.943 -3.039 8.173e-03 0.333 -2.452 C10orf12 chromosome 10 open reading frame 12 10 98731030 NM_015652 10q24.1 Hs.14555 Hs.427927 5    
228476_at 0.291 4.216 3.039 8.176e-03 0.333 -2.452 KIAA1407 KIAA1407 3 -115165673 AW193515 3q13.31 Hs.477159 1    
228257_at 0.282 7.495 3.039 8.177e-03 0.333 -2.452 ANKRD52 ankyrin repeat domain 52 12 -54917857 AA458879 12q13.3 Hs.524506 6

protein binding

 
225665_at -0.375 11.862 -3.038 8.202e-03 0.334 -2.455 ZAK sterile alpha motif and leucine zipper containing kinase AZK 2 173648810, 173648810 AI129320 2q24.2 Hs.444451 24

cell cycle checkpoint

DNA damage checkpoint

nucleotide binding

activation of MAPKK activity

magnesium ion binding

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

protein tyrosine kinase activity

ATP binding

nucleus

cytoplasm

response to stress

cell cycle

cell cycle arrest

protein kinase cascade

activation of JUN kinase activity

cell death

cell proliferation

response to radiation

transferase activity

cell differentiation

identical protein binding

positive regulation of apoptosis

MAPK signaling pathway

Tight junction

230422_at -0.392 4.183 -3.038 8.206e-03 0.334 -2.455 FPR3 formyl peptide receptor 3 19 56990222 AW026543 19q13.3-q13.4 Hs.445466 13

receptor activity

G-protein coupled receptor activity

N-formyl peptide receptor activity

plasma membrane

cell motion

chemotaxis

signal transduction

G-protein coupled receptor protein signaling pathway

integral to membrane

Neuroactive ligand-receptor interaction

200684_s_at -0.437 6.645 -3.034 8.267e-03 0.335 -2.462 UBE2L3 ubiquitin-conjugating enzyme E2L 3 22 20251956 AI819709 22q11.21 Hs.108104 Hs.603229 Hs.715088 38

ubiquitin ligase complex

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

cytoplasm

ubiquitin-dependent protein catabolic process

protein ubiquitination

ligase activity

enzyme binding

regulation of protein metabolic process

Ubiquitin mediated proteolysis

Parkinson's disease

204319_s_at -0.564 5.928 -3.034 8.271e-03 0.335 -2.462 RGS10 regulator of G-protein signaling 10 10 -121249328, -121249328 NM_002925 10q25 Hs.501200 15

signal transducer activity

protein binding

negative regulation of signal transduction

 
205210_at -0.243 5.527 -3.034 8.272e-03 0.335 -2.462 TGFBRAP1 transforming growth factor, beta receptor associated protein 1 2 -105249973 NM_004257 2q12.1 Hs.446350 7

transforming growth factor beta receptor binding

cytoplasm

signal transduction

transforming growth factor beta receptor signaling pathway

membrane

regulation of transcription

SMAD binding

 
217873_at -0.648 9.662 -3.033 8.284e-03 0.335 -2.464 CAB39 calcium binding protein 39 2 231285800, 231286506 NM_016289 2q37.1 Hs.632536 14

protein binding

cytoplasm

mTOR signaling pathway

230779_at 0.588 7.017 3.033 8.285e-03 0.335 -2.464 TNRC6B trinucleotide repeat containing 6B 22 38770766, 38903874, 38903874 BF594371 22q13.1 Hs.372082 15

nucleotide binding

cytoplasmic mRNA processing body

RNA binding

cytoplasm

regulation of translation

gene silencing by RNA

 
206181_at 0.281 2.996 3.032 8.305e-03 0.335 -2.466 SLAMF1 signaling lymphocytic activation molecule family member 1 1 -158846514 NM_003037 1q22-q23 Hs.523660 36

antigen binding

transmembrane receptor activity

plasma membrane

positive regulation of cell proliferation

cell surface

integral to membrane

interspecies interaction between organisms

lymphocyte activation

 
229614_at 0.457 4.892 3.031 8.316e-03 0.335 -2.467 ZNF320 zinc finger protein 320 19 -58071236 AI277652 19q13.41 Hs.446907 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
201064_s_at -0.385 9.863 -3.031 8.320e-03 0.335 -2.468 PABPC4 poly(A) binding protein, cytoplasmic 4 (inducible form) 1 -39799071 NM_003819 1p32-p36 Hs.169900 17

nucleotide binding

RNA binding

protein binding

cytoplasm

RNA processing

RNA catabolic process

translation

blood coagulation

poly(A) RNA binding

poly(U) RNA binding

poly(C) RNA binding

 
201457_x_at -0.355 6.984 -3.030 8.330e-03 0.335 -2.469 BUB3 budding uninhibited by benzimidazoles 3 homolog (yeast) 10 124903749 AF081496 10q26 Hs.418533 28

kinetochore

protein binding

nucleus

nucleolus

cytosol

mitosis

mitotic cell cycle checkpoint

cell proliferation

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

219495_s_at 0.317 4.259 3.029 8.345e-03 0.335 -2.470 ZNF180 zinc finger protein 180 19 -49671698 NM_013256 19q13.2 Hs.22305 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
202566_s_at -0.592 9.802 -3.029 8.349e-03 0.335 -2.471 SVIL supervillin 10 -29786282, -29786282 AF051851 10p11.2 Hs.499209 23

podosome

calcium ion binding

nucleus

cytoplasm

plasma membrane

cytoskeleton organization

skeletal muscle tissue development

cell projection

costamere

actin filament binding

 
1570169_at 0.224 4.674 3.028 8.370e-03 0.335 -2.473 CSMD2 CUB and Sushi multiple domains 2 1 -33752195 BC031871 1p35.1-p34.3 Hs.656915 9

protein binding

plasma membrane

integral to membrane

 
1569128_at -0.222 2.412 -3.027 8.377e-03 0.335 -2.474 C3orf38 chromosome 3 open reading frame 38 3 88281582 BC016013 3p11.1 Hs.476944 Hs.518099 2

apoptosis

 
207457_s_at -0.279 4.492 -3.027 8.380e-03 0.335 -2.474 LY6G6D lymphocyte antigen 6 complex, locus G6D 6 31791111, 3129252, 2930718 NM_021246 6p21.3 Hs.591792 2

protein binding

cytosol

plasma membrane

defense response

response to unfolded protein

response to nutrient

anchored to membrane

protein complex

NF-kappaB binding

 
218115_at 0.300 5.553 3.027 8.384e-03 0.335 -2.474 ASF1B ASF1 anti-silencing function 1 homolog B (S. cerevisiae) 19 -14091320 NM_018154 19p13.12 Hs.26516 15

chromatin

nucleus

chromatin assembly or disassembly

nucleosome assembly

multicellular organismal development

spermatogenesis

chromatin modification

cell differentiation

histone binding

regulation of transcription

 
212653_s_at 0.326 7.281 3.027 8.387e-03 0.335 -2.475 EHBP1 EH domain binding protein 1 2 62754516, 62786504, 62787535 AB020710 2p15 Hs.271667 13

cytoplasm

membrane

 
222700_at -0.556 7.622 -3.027 8.388e-03 0.335 -2.475 ATL2 atlastin GTPase 2 2 -38375534 AV700003 2p22.2-p22.1 Hs.594950 8

nucleotide binding

GTPase activity

GTP binding

membrane

integral to membrane

 
1554127_s_at -0.619 8.134 -3.025 8.421e-03 0.336 -2.478 MSRB3 methionine sulfoxide reductase B3 12 63958754 BC040053 12q14.3 Hs.339024 6

mitochondrion

endoplasmic reticulum

peptide-methionine-(S)-S-oxide reductase activity

zinc ion binding

oxidoreductase activity

metal ion binding

oxidation reduction

 
210154_at 0.568 6.228 3.025 8.422e-03 0.336 -2.478 ME2 malic enzyme 2, NAD(+)-dependent, mitochondrial 18 46659432 M55905 18q21 6p25-p24 Hs.233119 24

malate dehydrogenase (decarboxylating) activity

binding

mitochondrion

mitochondrial matrix

malate metabolic process

electron carrier activity

oxidoreductase activity

malate dehydrogenase (oxaloacetate-decarboxylating) activity

metal ion binding

NAD or NADH binding

oxidation reduction

Pyruvate metabolism

Biosynthesis of phenylpropanoids

Biosynthesis of alkaloids derived from terpenoid and polyketide

240289_at -0.881 7.611 -3.023 8.453e-03 0.337 -2.482 LOC100131683 hypothetical protein LOC100131683 4   W86910 4q35.1 Hs.442702      
210007_s_at -0.485 4.688 -3.023 8.454e-03 0.337 -2.482 GPD2 glycerol-3-phosphate dehydrogenase 2 (mitochondrial) 2 157000210, 157001145 U36310 2q24.1 Hs.512382 20

glycerol-3-phosphate dehydrogenase activity

calcium ion binding

mitochondrion

mitochondrial inner membrane

glycerol-3-phosphate metabolic process

gluconeogenesis

glycerol-3-phosphate dehydrogenase complex

oxidoreductase activity

oxidation reduction

Glycerophospholipid metabolism

1559630_at 0.253 3.876 3.022 8.471e-03 0.337 -2.484 DLGAP3 discs, large (Drosophila) homolog-associated protein 3 1 -35103623 R24798 1p35.3-p34.1 Hs.436393 9

protein binding

plasma membrane

cell-cell signaling

postsynaptic density

cell junction

synapse

postsynaptic membrane

 
204663_at 0.297 7.408 3.022 8.478e-03 0.337 -2.484 ME3 malic enzyme 3, NADP(+)-dependent, mitochondrial 11 -85829799, -85829797, -85829797 NM_006680 11cen-q22.3 Hs.199743 8

malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity

mitochondrion

mitochondrial matrix

pyruvate metabolic process

malate metabolic process

oxygen and reactive oxygen species metabolic process

aerobic respiration

oxidoreductase activity

metal ion binding

cofactor binding

NAD or NADH binding

oxidation reduction

Pyruvate metabolism

Carbon fixation in photosynthetic organisms

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Metabolic pathways

212150_at -0.511 8.492 -3.022 8.480e-03 0.337 -2.485 EFR3A EFR3 homolog A (S. cerevisiae) 8 132985540 AA805651 8q24.22 Hs.204564 4

binding

plasma membrane

 
214815_at 0.389 4.959 3.021 8.496e-03 0.337 -2.486 TRIM33 tripartite motif-containing 33 1 -114736921 AU136587 1p13.1 Hs.26837 12

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

negative regulation of transcription

protein ubiquitination

ligase activity

regulation of transforming growth factor beta receptor signaling pathway

modification-dependent protein catabolic process

negative regulation of BMP signaling pathway

metal ion binding

co-SMAD binding

R-SMAD binding

 
1555567_s_at -0.521 7.832 -3.020 8.512e-03 0.337 -2.488 LMOD3 leiomodin 3 (fetal) 3 -69238728 BC039202 3p14.1 Hs.350621 9

tropomyosin binding

cytoplasm

cytoskeleton

 
48659_at 0.246 6.612 3.019 8.515e-03 0.337 -2.488 MIIP migration and invasion inhibitory protein 1 12002098 W60802 1p36.22 Hs.8595 4    
202905_x_at -0.442 5.938 -3.019 8.517e-03 0.337 -2.488 NBN nibrin 8 -91014739 AI796269 8q21 Hs.492208 222

DNA damage checkpoint

telomere maintenance

nuclear chromosome, telomeric region

in utero embryonic development

blastocyst growth

damaged DNA binding

intracellular

nucleus

nucleoplasm

replication fork

chromosome

nucleolus

Golgi apparatus

double-strand break repair

response to DNA damage stimulus

cell cycle

cell cycle arrest

mitotic cell cycle G2/M transition DNA damage checkpoint

meiosis

transcription factor binding

cell proliferation

regulation of DNA replication initiation

DNA damage response, signal transduction by p53 class mediator

Mre11 complex

G1/S transition checkpoint

nuclear inclusion body

isotype switching

protein N-terminus binding

regulation of fibroblast proliferation

neuromuscular process controlling balance

Homologous recombination

228953_at -0.483 6.967 -3.019 8.531e-03 0.337 -2.490 WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules 15 81275026 AI023634 15q25.2 Hs.377360 5

actin binding

cytoplasm

ER-Golgi intermediate compartment

Golgi apparatus

membrane

cytoplasmic vesicle membrane

cytoplasmic vesicle

 
55662_at -0.381 6.188 -3.018 8.540e-03 0.337 -2.491 C10orf76 chromosome 10 open reading frame 76 10 -103595345 H27225 10q24.32 Hs.16004 4

membrane

integral to membrane

 
201911_s_at -0.651 5.912 -3.017 8.562e-03 0.337 -2.493 FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) 13 97593434, 97593434 NM_005766 13q32.2 Hs.403917 9

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

binding

intracellular

cytoplasm

cytoskeleton

cytoskeletal protein binding

extrinsic to membrane

regulation of Rho protein signal transduction

 
212640_at 0.505 5.977 3.016 8.567e-03 0.337 -2.494 PTPLB protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b 3 -124696052 AV712602 3q21.1 Hs.705480 5

protein binding

endoplasmic reticulum

membrane

integral to membrane

Biosynthesis of unsaturated fatty acids

1569256_a_at -0.290 5.689 -3.016 8.568e-03 0.337 -2.494 FAM43B family with sequence similarity 43, member B 1 20751518 BC015675 1p36.12 Hs.429179 3    
228027_at 0.384 7.503 3.016 8.573e-03 0.337 -2.494 GPRASP2 G protein-coupled receptor associated sorting protein 2 X 101853995 BF732712 Xq22.1 Hs.603154 11

protein binding

cytoplasm

 
203957_at -0.437 6.571 -3.016 8.578e-03 0.337 -2.495 E2F6 E2F transcription factor 6 2 -11501951 NM_001952 2p25.1 Hs.603093 24

regulation of transcription of G1/S-phase of mitotic cell cycle

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

transcription corepressor activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

cell cycle

 
238465_at 0.937 5.872 3.016 8.580e-03 0.337 -2.495 C5orf35 chromosome 5 open reading frame 35 5 56240859 AI265933 5q11.2 Hs.85950 1    
217325_at -0.285 5.259 -3.016 8.583e-03 0.337 -2.495 KRT3 keratin 3 12 -51469735 X05421 12q12-q13 Hs.680652 9

structural molecule activity

structural molecule activity

epithelial cell differentiation

keratin filament

intermediate filament cytoskeleton organization

 
227889_at 0.276 4.849 3.015 8.587e-03 0.337 -2.496 LPCAT2 lysophosphatidylcholine acyltransferase 2 16 54100413 AI765437 16q12.2 Hs.460857 4

calcium ion binding

endoplasmic reticulum

Golgi apparatus

Golgi stack

platelet activating factor biosynthetic process

metabolic process

acyltransferase activity

phospholipid biosynthetic process

membrane

integral to membrane

membrane organization

transferase activity

1-acylglycerophosphocholine O-acyltransferase activity

1-alkylglycerophosphocholine O-acetyltransferase activity

 
225894_at -0.425 11.477 -3.015 8.588e-03 0.337 -2.496 SYNPO2 synaptopodin 2 4 120029443, 120029443 AL589603 4q26 Hs.655519 14

actin binding

protein binding

nucleus

cytoplasm

 
202750_s_at -0.460 6.999 -3.014 8.609e-03 0.338 -2.498 TFIP11 tuftelin interacting protein 11 22 -25217894 AL080147 22q12.1 Hs.20225 19

nucleic acid binding

protein binding

proteinaceous extracellular matrix

intracellular

nucleus

spliceosomal complex

cytoplasm

mRNA processing

RNA splicing

nuclear speck

biomineral formation

 
203705_s_at -0.624 7.321 -3.013 8.622e-03 0.338 -2.499 FZD7 frizzled homolog 7 (Drosophila) 2 202607554 AI333651 2q33 Hs.173859 23

non-G-protein coupled 7TM receptor activity

G-protein coupled receptor activity

plasma membrane

G-protein coupled receptor protein signaling pathway

multicellular organismal development

integral to membrane

Wnt receptor signaling pathway

Wnt receptor activity

Wnt signaling pathway

Melanogenesis

Pathways in cancer

Colorectal cancer

Basal cell carcinoma

226588_at -0.380 5.799 -3.012 8.644e-03 0.338 -2.502 CWC22 CWC22 spliceosome-associated protein homolog (S. cerevisiae) 2 -180517848 AB046824 2q31.3 Hs.311363 6

RNA binding

protein binding

nucleus

spliceosomal complex

mRNA processing

RNA splicing

RNA metabolic process

regulation of nuclear mRNA splicing, via spliceosome

 
219939_s_at -0.278 12.053 -3.012 8.650e-03 0.338 -2.502 CSDE1 cold shock domain containing E1, RNA-binding 1 -115061060, -115061060, -115061059 NM_007158 1p22 Hs.69855 25

DNA binding

RNA binding

protein binding

cytoplasm

regulation of transcription, DNA-dependent

male gonad development

 
200849_s_at -0.448 9.078 -3.011 8.657e-03 0.338 -2.503 AHCYL1 adenosylhomocysteinase-like 1 1 110328830 AI589266 1p13.2 Hs.705418 15

adenosylhomocysteinase activity

binding

endoplasmic reticulum

one-carbon metabolic process

metabolic process

hydrolase activity

Cysteine and methionine metabolism

Selenoamino acid metabolism

Metabolic pathways

201488_x_at 0.275 9.629 3.011 8.662e-03 0.338 -2.504 KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 1 32252077 BC000717 1p32 Hs.709204 86

G2/M transition of mitotic cell cycle

DNA binding

RNA binding

SH3/SH2 adaptor activity

protein binding

nucleus

mRNA processing

cell cycle

cell cycle arrest

cell surface receptor linked signal transduction

cell proliferation

membrane

negative regulation of transcription

transcription repressor activity

SH3 domain binding

regulation of RNA export from nucleus

 
233261_at 0.417 3.599 3.011 8.668e-03 0.338 -2.504 EBF1 early B-cell factor 1 5 -158055500 AU145682 5q34 Hs.573143 21

DNA binding

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

transcription regulator activity

metal ion binding

 
221774_x_at -0.253 5.992 -3.009 8.697e-03 0.338 -2.507 FAM48A family with sequence similarity 48, member A 13 -36481450 AW003334 13q13.3 Hs.435815 14

protein binding

multicellular organismal development

gastrulation

 
235547_at 0.768 3.938 3.009 8.698e-03 0.338 -2.507 N4BP2L2 NEDD4 binding protein 2-like 2 13 -31989029, -31904929 BG548427 13q13.1 Hs.507680 4

molecular_function

cellular_component

biological_process

 
218265_at -0.287 6.809 -3.009 8.706e-03 0.338 -2.508 SECISBP2 SECIS binding protein 2 9 91123231 NM_024077 9q22.2 Hs.59804 20

RNA binding

mRNA 3'-UTR binding

nucleus

translation

 
205478_at 0.513 11.526 3.008 8.716e-03 0.338 -2.509 PPP1R1A protein phosphatase 1, regulatory (inhibitor) subunit 1A 12 -53259290 NM_006741 12q13.2 Hs.505662 9

protein serine/threonine phosphatase inhibitor activity

protein binding

carbohydrate metabolic process

glycogen metabolic process

signal transduction

Long-term potentiation

223993_s_at 0.362 9.370 3.007 8.731e-03 0.338 -2.511 CNIH4 cornichon homolog 4 (Drosophila) 1 222611217 AL136930 1q42.11 Hs.195403 Hs.445890 11

protein binding

endoplasmic reticulum

intracellular signaling cascade

membrane

integral to membrane

 
204059_s_at 0.571 9.227 3.007 8.733e-03 0.338 -2.511 ME1 malic enzyme 1, NADP(+)-dependent, cytosolic 6 -83976828 NM_002395 6q12 Hs.21160 24

malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity

malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity

binding

nucleus

nucleolus

cytoplasm

cytosol

carbohydrate metabolic process

malate metabolic process

NADP biosynthetic process

electron carrier activity

response to hormone stimulus

response to carbohydrate stimulus

oxidoreductase activity

manganese ion binding

ADP binding

metal ion binding

NADP or NADPH binding

NAD or NADH binding

oxidation reduction

Pyruvate metabolism

Carbon fixation in photosynthetic organisms

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Metabolic pathways

PPAR signaling pathway

219330_at 0.287 4.051 3.007 8.734e-03 0.338 -2.511 VANGL1 vang-like 1 (van gogh, Drosophila) 1 115986096 NM_024062 1p11-p13.1 Hs.515130 12

protein binding

multicellular organismal development

membrane

integral to membrane

Wnt signaling pathway

207145_at -0.637 4.700 -3.007 8.737e-03 0.338 -2.511 MSTN myostatin 2 -190628670 NM_005259 2q32.2 Hs.41565 55

cytokine activity

extracellular region

extracellular space

transforming growth factor beta receptor signaling pathway

muscle organ development

growth factor activity

growth

positive regulation of transcription

 
218790_s_at 0.312 5.262 3.007 8.740e-03 0.338 -2.512 TMLHE trimethyllysine hydroxylase, epsilon X -154372966 NM_018196 Xq28 Hs.133321 12

iron ion binding

mitochondrion

mitochondrial matrix

mitochondrial matrix

electron carrier activity

oxidoreductase activity

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

L-ascorbic acid binding

carnitine biosynthetic process

trimethyllysine dioxygenase activity

oxidation reduction

Lysine degradation

224583_at 0.475 4.477 3.007 8.742e-03 0.338 -2.512 COTL1 coactosin-like 1 (Dictyostelium) 16 -83156704 AL565621 16q24.1 Hs.289092 18

actin binding

cellular_component

intracellular

cytoplasm

cytoskeleton

biological_process

enzyme binding

defense response to fungus

 
235333_at 0.626 5.816 3.005 8.774e-03 0.339 -2.515 B4GALT6 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 18 -27456206 BG503479 18q11 Hs.591063 12

magnesium ion binding

calcium ion binding

Golgi apparatus

carbohydrate metabolic process

galactosyltransferase activity

membrane

integral to membrane

transferase activity, transferring glycosyl groups

manganese ion binding

Sphingolipid metabolism

Metabolic pathways

229552_at -0.338 4.817 -3.003 8.804e-03 0.339 -2.518 LOC283454 hypothetical protein LOC283454 12   AI698128 12q24.23 Hs.26605 1    
235306_at 0.681 5.665 3.003 8.811e-03 0.339 -2.519 GIMAP8 GTPase, IMAP family member 8 7 149778894 AI611648 7q36.1 Hs.647121 7

nucleotide binding

GTP binding

mitochondrion

endoplasmic reticulum

Golgi apparatus

 
220683_at -0.302 5.002 -3.003 8.813e-03 0.339 -2.519 RDH8 retinol dehydrogenase 8 (all-trans) 19 9984924 NM_015725 19p13.2-p13.3 Hs.675522 9

estradiol 17-beta-dehydrogenase activity

retinol dehydrogenase activity

binding

cytoplasm

integral to plasma membrane

estrogen biosynthetic process

visual perception

membrane

oxidoreductase activity

response to stimulus

oxidation reduction

Retinol metabolism

Metabolic pathways

222885_at 0.344 8.351 3.003 8.813e-03 0.339 -2.519 EMCN endomucin 4 -101535522 AF205940 4q24 Hs.152913 12

extracellular region

plasma membrane

integral to membrane

 
201799_s_at -0.408 6.906 -3.003 8.814e-03 0.339 -2.519 OSBP oxysterol binding protein 11 -59098446 AI927993 11q12-q13 Hs.597091 13

cytoplasm

Golgi apparatus

lipid transport

oxysterol binding

steroid metabolic process

membrane

 
236022_at 0.275 5.085 3.002 8.828e-03 0.339 -2.521 MYO19 myosin XIX 17 -31943030, -31925712, -31925711 AI650341 17q12 Hs.302051 3

nucleotide binding

motor activity

actin binding

ATP binding

cytoplasm

myosin complex

 
204152_s_at 0.270 4.888 3.001 8.837e-03 0.339 -2.521 MFNG MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 22 -36195048 AI738965 22q12 Hs.517603 15

extracellular space

Golgi apparatus

pattern specification process

membrane

integral to membrane

transferase activity, transferring glycosyl groups

integral to Golgi membrane

O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity

Notch signaling pathway

202457_s_at -0.606 9.104 -3.001 8.838e-03 0.339 -2.521 PPP3CA protein phosphatase 3 (formerly 2B), catalytic subunit, alpha isoform 4 -102163609 AA911231 4q21-q24 Hs.435512 59

protein serine/threonine phosphatase activity

iron ion binding

calcium ion binding

calmodulin binding

nucleus

cytoplasm

calcineurin complex

protein amino acid dephosphorylation

zinc ion binding

hydrolase activity

MAPK signaling pathway

Calcium signaling pathway

Apoptosis

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Long-term potentiation

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

210746_s_at 0.199 3.885 3.001 8.847e-03 0.339 -2.522 EPB42 erythrocyte membrane protein band 4.2 15 -41276717 M30646 15q15-q21 Hs.368642 34

cell morphogenesis

protein-glutamine gamma-glutamyltransferase activity

structural constituent of cytoskeleton

protein binding

ATP binding

cytoplasm

plasma membrane

regulation of cell shape

peptide cross-linking

hemoglobin metabolic process

cortical cytoskeleton

erythrocyte maturation

spleen development

ion homeostasis

iron ion homeostasis

 
221601_s_at 1.099 4.906 3.001 8.848e-03 0.339 -2.522 FAIM3 Fas apoptotic inhibitory molecule 3 1 -205143252, -205143252 AI084226 1q32.1 Hs.58831 Hs.719320 10

nucleus

cytoplasm

plasma membrane

focal adhesion

anti-apoptosis

immune response

cellular defense response

integral to membrane

 
222798_at 0.598 7.204 2.998 8.895e-03 0.339 -2.527 PTER phosphotriesterase related 10 16518972 BF112019 10p12 Hs.444321 Hs.716660 6

zinc ion binding

catabolic process

hydrolase activity, acting on ester bonds

metal ion binding

 
223191_at -0.326 10.153 -2.998 8.897e-03 0.339 -2.527 COX16 COX16 cytochrome c oxidase assembly homolog (S. cerevisiae) 14 -69861551 AF151037 14q24.2 Hs.709581 5

mitochondrion

membrane

integral to membrane

mitochondrial membrane

 
1558093_s_at -0.592 5.991 -2.998 8.906e-03 0.339 -2.528 MATR3 matrin 3 5 138637690, 138657253 BI832461 5q31.2 Hs.268939 24

nucleotide binding

RNA binding

structural molecule activity

protein binding

intracellular

nucleus

nuclear inner membrane

zinc ion binding

nuclear matrix

metal ion binding

 
220939_s_at -0.409 9.023 -2.997 8.910e-03 0.339 -2.529 DPP8 dipeptidyl-peptidase 8 15 -63525050, -63525050 NM_017743 15q22 Hs.591106 16

aminopeptidase activity

nucleus

cytoplasm

proteolysis

immune response

peptidase activity

serine-type peptidase activity

dipeptidyl-peptidase activity

membrane

 
212651_at -1.401 8.536 -2.997 8.913e-03 0.339 -2.529 RHOBTB1 Rho-related BTB domain containing 1 10 -62299205, -62299205, -62299205 AB018283 10q21.2 Hs.148670 10

nucleotide binding

protein binding

GTP binding

intracellular

small GTPase mediated signal transduction

 
1558969_a_at 0.223 5.256 2.997 8.922e-03 0.339 -2.530 RPL32P3 ribosomal protein L32 pseudogene 3 3 -130584366 BG741817 3q21.3 Hs.477537 Hs.652423 2    
205902_at -0.477 6.119 -2.995 8.951e-03 0.340 -2.533 KCNN3 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 1 -152946536, -152946536 AJ251016 1q21.3 Hs.490765 40

ion channel activity

calmodulin binding

ion transport

potassium ion transport

membrane

integral to membrane

small conductance calcium-activated potassium channel activity

 
229963_at 0.380 3.927 2.994 8.965e-03 0.340 -2.534 BEX5 brain expressed, X-linked 5 X -101295335, -101295335 AV726956 Xq22.1 Hs.47209 5

cytoplasm

 
226475_at 0.323 6.394 2.993 8.995e-03 0.340 -2.537 FAM118A family with sequence similarity 118, member A 22 44083744, 44084448 AI650582 22q13 Hs.265018 6

membrane

integral to membrane

 
238647_at -0.500 5.084 -2.993 8.995e-03 0.340 -2.537 C14orf28 chromosome 14 open reading frame 28 14 44436256 AA496213 14q21.2 Hs.82098 3    
202646_s_at -0.327 11.463 -2.993 8.997e-03 0.340 -2.537 CSDE1 cold shock domain containing E1, RNA-binding 1 -115061060, -115061060, -115061059 AA167775 1p22 Hs.69855 25

DNA binding

RNA binding

protein binding

cytoplasm

regulation of transcription, DNA-dependent

male gonad development

 
1554868_s_at -0.758 7.913 -2.992 9.005e-03 0.340 -2.538 PCNP PEST proteolytic signal containing nuclear protein 3 102775731 BC013916 3q12.3 Hs.545311 Hs.654949 6

protein binding

nucleus

cell cycle

protein ubiquitination

proteasomal ubiquitin-dependent protein catabolic process

 
227031_at -0.426 7.445 -2.992 9.017e-03 0.340 -2.539 SNX13 sorting nexin 13 7 -17796910 AV681975 7p21.1 Hs.487648 10

signal transducer activity

protein binding

cell communication

negative regulation of signal transduction

protein transport

phosphoinositide binding

 
225274_at -0.596 9.882 -2.991 9.021e-03 0.340 -2.540 PCYOX1 prenylcysteine oxidase 1 2 70338734 BF247054 2p13.3 Hs.567502 13

prenylcysteine oxidase activity

binding

lysosome

oxidoreductase activity

prenylated protein catabolic process

prenylcysteine catabolic process

very-low-density lipoprotein particle

oxidation reduction

 
206806_at 0.222 3.698 2.991 9.035e-03 0.341 -2.541 DGKI diacylglycerol kinase, iota 7 -136724924 NM_004717 7q32.3-q33 Hs.242947 6

nucleotide binding

diacylglycerol kinase activity

protein binding

ATP binding

nucleus

cytoplasm

activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway

intracellular signaling cascade

zinc ion binding

transferase activity

metal ion binding

Glycerolipid metabolism

Glycerophospholipid metabolism

Metabolic pathways

Phosphatidylinositol signaling system

224796_at 0.341 6.708 2.990 9.050e-03 0.341 -2.543 ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 8 -131133534 W03103 8q24.1-q24.2 Hs.655552 19

protein binding

cytoplasm

ARF GTPase activator activity

zinc ion binding

membrane

regulation of ARF GTPase activity

metal ion binding

Endocytosis

Fc gamma R-mediated phagocytosis

226649_at -0.367 7.435 -2.989 9.057e-03 0.341 -2.543 PANK1 pantothenate kinase 1 10 -91332728, -91332728 AI373299 10q23.31 Hs.715502 10

nucleotide binding

pantothenate kinase activity

pantothenate kinase activity

ATP binding

cytoplasm

cytosol

coenzyme A biosynthetic process

transferase activity

Pantothenate and CoA biosynthesis

Metabolic pathways

234071_at -0.345 3.755 -2.988 9.089e-03 0.342 -2.547 DEPDC6 DEP domain containing 6 8 120955080 AU147969 8q24.12 Hs.112981 11

protein binding

intracellular

negative regulation of protein kinase activity

intracellular signaling cascade

negative regulation of TOR signaling pathway

regulation of apoptosis

negative regulation of cell size

 
228189_at -0.408 6.760 -2.987 9.096e-03 0.342 -2.547 BAG4 BCL2-associated athanogene 4 8 38153262 T32429 8p11.23 Hs.194726 14

receptor signaling protein activity

protein binding

cytoplasm

protein folding

apoptosis

anti-apoptosis

 
214106_s_at 0.395 5.044 2.987 9.099e-03 0.342 -2.548 GMDS GDP-mannose 4,6-dehydratase 6 -1569039 AI762113 6p25 Hs.144496 Hs.660919 11

binding

intracellular

cytoplasm

carbohydrate metabolic process

leukocyte adhesion

GDP-mannose 4,6-dehydratase activity

lyase activity

GDP-mannose metabolic process

'de novo' GDP-L-fucose biosynthetic process

cellular metabolic process

coenzyme binding

Fructose and mannose metabolism

Amino sugar and nucleotide sugar metabolism

Metabolic pathways

220667_at -0.242 3.056 -2.985 9.130e-03 0.343 -2.551 USP49 ubiquitin specific peptidase 49 6 -41873360 NM_018540 6p21 Hs.665742 5

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

zinc ion binding

metal ion binding

 
238315_s_at 0.402 3.990 2.985 9.142e-03 0.343 -2.552 ZNF567 zinc finger protein 567 19 41872141 BF061829 19q13.12 Hs.412517 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
218728_s_at 0.464 7.655 2.984 9.150e-03 0.343 -2.552 CNIH4 cornichon homolog 4 (Drosophila) 1 222611217 NM_014184 1q42.11 Hs.195403 Hs.445890 11

protein binding

endoplasmic reticulum

intracellular signaling cascade

membrane

integral to membrane

 
235146_at 0.644 7.179 2.984 9.151e-03 0.343 -2.553 TMCC3 transmembrane and coiled-coil domain family 3 12 -93485030 N51717 12q22 Hs.370410 5

membrane

integral to membrane

 
231403_at 0.365 6.017 2.983 9.168e-03 0.343 -2.554 TRIO triple functional domain (PTPRF interacting) 5 14196828 N21108 5p15.2 Hs.130031 22

nucleotide binding

protein serine/threonine kinase activity

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

ATP binding

intracellular

cytoplasm

protein amino acid phosphorylation

transmembrane receptor protein tyrosine phosphatase signaling pathway

transferase activity

regulation of Rho protein signal transduction

 
212731_at -0.499 8.864 -2.983 9.174e-03 0.343 -2.555 ANKRD46 ankyrin repeat domain 46 8 -101602175 U79297 8q22.2 Hs.530199 5

membrane

integral to membrane

 
228039_at -0.433 7.700 -2.982 9.186e-03 0.343 -2.556 DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 5 134122359 AI765169 5q31.1 Hs.406549 9

nucleotide binding

RNA binding

helicase activity

ATP binding

nucleus

mRNA processing

ATP-dependent helicase activity

RNA splicing

Cajal body

nuclear speck

hydrolase activity

 
225273_at 0.406 6.123 2.980 9.229e-03 0.345 -2.560 WWC3 WWC family member 3 X 9943794 AB033106 Xp22.32 Hs.527524 5    
232266_x_at 0.325 8.553 2.979 9.251e-03 0.345 -2.562 CDC2L5 cell division cycle 2-like 5 (cholinesterase-related cell division controller) 7 39956483 AK024379 7p13 Hs.233552 18

nucleotide binding

cyclin-dependent protein kinase activity

ATP binding

protein amino acid phosphorylation

regulation of mitosis

multicellular organismal development

positive regulation of cell proliferation

transferase activity

 
233884_at 0.566 4.537 2.978 9.268e-03 0.345 -2.564 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 1 -41748270 AL512747 1p34 Hs.648369 Hs.715958 12

DNA binding

intracellular

nucleus

cytoplasm

zinc ion binding

transcription activator activity

positive regulation of transcription

metal ion binding

 
215620_at 0.401 5.033 2.978 9.274e-03 0.345 -2.565 RREB1 ras responsive element binding protein 1 6 7053186 AU147182 6p25 Hs.298248 13

DNA binding

intracellular

nucleus

cytoplasm

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

Ras protein signal transduction

multicellular organismal development

zinc ion binding

transcription activator activity

nuclear speck

metal ion binding

 
233813_at 0.507 4.567 2.977 9.287e-03 0.345 -2.566 PPP1R16B protein phosphatase 1, regulatory (inhibitor) subunit 16B 20 36867761 AK026900 20q11.23 Hs.45719 7

plasma membrane

signal transduction

protein phosphatase binding

 
203763_at 0.357 5.435 2.977 9.290e-03 0.345 -2.566 DYNC2LI1 dynein, cytoplasmic 2, light intermediate chain 1 2 43854685, 43854685, 43854685 NM_016008 2p25.1-p24.1 Hs.371597 7

motor activity

cytoplasm

microtubule

cilium

multicellular organismal development

determination of left/right symmetry

cell projection organization

dynein complex

cilium axoneme

cilium assembly

 
239918_at -0.216 5.589 -2.977 9.294e-03 0.345 -2.566 PVR poliovirus receptor 19 49838937, 49838937 AI139114 19q13.2 Hs.171844 46

positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target

receptor activity

extracellular region

extracellular space

cytoplasm

plasma membrane

plasma membrane

cell adhesion

cell surface

integral to membrane

susceptibility to natural killer cell mediated cytotoxicity

interspecies interaction between organisms

cell adhesion molecule binding

susceptibility to T cell mediated cytotoxicity

Cell adhesion molecules (CAMs)

212567_s_at -0.331 8.340 -2.977 9.294e-03 0.345 -2.566 MAP4 microtubule-associated protein 4 3 -47989573, -47867183, -47867183 AL523310 3p21 Hs.517949 40

structural molecule activity

protein binding

microtubule

microtubule associated complex

negative regulation of microtubule depolymerization

 
230619_at -0.255 6.369 -2.976 9.309e-03 0.345 -2.568 ARNT aryl hydrocarbon receptor nuclear translocator 1 -149048809 AI768497 1q21 Hs.632446 88

response to hypoxia

positive regulation of endothelial cell proliferation

RNA polymerase II transcription factor activity, enhancer binding

transcription coactivator activity

signal transducer activity

nucleus

regulation of transcription, DNA-dependent

signal transduction

positive regulation vascular endothelial growth factor production

aryl hydrocarbon receptor binding

positive regulation of vascular endothelial growth factor receptor signaling pathway

mRNA transcription from RNA polymerase II promoter

positive regulation of gene-specific transcription

sequence-specific DNA binding

regulation of transcription from RNA polymerase II promoter in response to oxidative stress

positive regulation of erythrocyte differentiation

positive regulation of glycolysis

positive regulation of hormone biosynthetic process

protein heterodimerization activity

Pathways in cancer

Renal cell carcinoma

240061_at 0.591 4.293 2.976 9.309e-03 0.345 -2.568 PION pigeon homolog (Drosophila) 7 -76778003 AW664903 7q11.23 Hs.186649 4    
1562581_at 0.324 4.926 2.974 9.342e-03 0.346 -2.571 LOC254028 hypothetical LOC254028 14   AK093210 14q11.2 Hs.652569 2    
1559870_at 0.290 5.947 2.973 9.361e-03 0.346 -2.573 LOC100129129 hypothetical protein LOC100129129 8   BC038546 8p23.1 Hs.662094      
208583_x_at -0.224 6.372 -2.973 9.366e-03 0.346 -2.573 HIST1H2AJ histone cluster 1, H2aj 6 -27890058 NM_021066 6p22-p21.3 Hs.406691 10  

Systemic lupus erythematosus

212588_at 0.507 4.854 2.972 9.378e-03 0.346 -2.574 PTPRC protein tyrosine phosphatase, receptor type, C 1 196874759, 196874759 Y00062 1q31-q32 Hs.654514 174

negative regulation of T cell mediated cytotoxicity

negative regulation of cytokine-mediated signaling pathway

immunoglobulin biosynthetic process

transmembrane receptor protein tyrosine phosphatase activity

protein binding

plasma membrane

integral to plasma membrane

focal adhesion

negative regulation of protein kinase activity

negative regulation of protein kinase activity

protein amino acid dephosphorylation

cell surface receptor linked signal transduction

hydrolase activity

protein kinase binding

T cell differentiation

positive regulation of B cell proliferation

regulation of S phase

positive regulation of T cell proliferation

positive regulation of protein kinase activity

T cell receptor signaling pathway

B cell receptor signaling pathway

positive regulation of antigen receptor-mediated signaling pathway

release of sequestered calcium ion into cytosol

defense response to virus

regulation of cell cycle

Cell adhesion molecules (CAMs)

T cell receptor signaling pathway

Fc gamma R-mediated phagocytosis

Primary immunodeficiency

207180_s_at -0.304 7.429 -2.970 9.418e-03 0.346 -2.578 HTATIP2 HIV-1 Tat interactive protein 2, 30kDa 11 20341806, 20341822, 20341864, 20341978, 20342262 NM_006410 11p15.1 Hs.90753 31

RNA polymerase II transcription factor activity

transcription coactivator activity

protein binding

nucleus

nuclear envelope

cytoplasm

regulation of transcription from RNA polymerase II promoter

anti-apoptosis

induction of apoptosis

multicellular organismal development

oxidoreductase activity

cell differentiation

regulation of apoptosis

interspecies interaction between organisms

regulation of angiogenesis

nuclear import

oxidation reduction

 
225161_at -0.429 7.141 -2.970 9.426e-03 0.346 -2.579 GFM1 G elongation factor, mitochondrial 1 3 159845010 AI659020 3q25.1-q26.2 Hs.518355 11

nucleotide binding

translation elongation factor activity

GTPase activity

GTP binding

intracellular

mitochondrion

translational elongation

 
203524_s_at 0.459 7.661 2.970 9.427e-03 0.346 -2.579 MPST mercaptopyruvate sulfurtransferase 22 35745647 NM_021126 22q13.1 Hs.248267 9

thiosulfate sulfurtransferase activity

cytoplasm

mitochondrion

sulfate transport

cyanate catabolic process

response to toxin

transferase activity

3-mercaptopyruvate sulfurtransferase activity

Cysteine and methionine metabolism

Metabolic pathways

1553071_a_at -0.721 6.578 -2.970 9.427e-03 0.346 -2.579 MYOZ3 myozenin 3 5 150020596 NM_133371 5q33.1 Hs.91626 7

protein binding

cytoplasm

Z disc

 
236954_at -0.352 5.249 -2.970 9.429e-03 0.346 -2.579 BOLL bol, boule-like (Drosophila) 2 -198299847, -198299847 BF059752 2q33 Hs.169797 16

nucleotide binding

RNA binding

protein binding

cytoplasm

regulation of translation

meiosis

multicellular organismal development

spermatogenesis

translation activator activity

cell differentiation

positive regulation of translational initiation

 
231260_at 0.350 3.911 2.969 9.439e-03 0.346 -2.580 BC036928 hypothetical protein BC036928 19   AW162207 19q13.43 Hs.549564 1    
227792_at -0.323 7.361 -2.968 9.465e-03 0.347 -2.583 ITPRIPL2 inositol 1,4,5-triphosphate receptor interacting protein-like 2 16 19032754 AA490685 16p12.3 Hs.530899 Hs.648523 3

membrane

integral to membrane

 
201160_s_at -0.226 12.837 -2.967 9.474e-03 0.347 -2.584 CSDA cold shock domain protein A 12 -10742944 AL556190 12p13.1 Hs.221889 20

negative regulation of transcription from RNA polymerase II promoter

double-stranded DNA binding

transcription factor activity

RNA polymerase II transcription factor activity

transcription corepressor activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

response to cold

Tight junction

213587_s_at 0.423 6.317 2.967 9.482e-03 0.347 -2.584 ATP6V0E2 ATPase, H+ transporting V0 subunit e2 7 149200989, 149200989 AI884867 7q36.1 Hs.556998 Hs.698060 5

ion transport

vacuolar acidification

hydrogen ion transmembrane transporter activity

ATP synthesis coupled proton transport

ATP hydrolysis coupled proton transport

proton transport

membrane

integral to membrane

cell growth

hydrolase activity

proton-transporting V-type ATPase, V0 domain

ATPase activity, coupled to transmembrane movement of ions

Oxidative phosphorylation

Metabolic pathways

Vibrio cholerae infection

Epithelial cell signaling in Helicobacter pylori infection

201238_s_at -0.517 10.394 -2.967 9.484e-03 0.347 -2.585 CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 7 116289798 BC005338 7q31.2-q31.3 Hs.446123 14

actin binding

protein binding

protein complex assembly

cell motion

F-actin capping protein complex

actin cytoskeleton organization

actin filament capping

 
202144_s_at -0.453 9.944 -2.967 9.488e-03 0.347 -2.585 ADSL adenylosuccinate lyase 22 39072449 NM_000026 22q13.1 22q13.2 Hs.75527 29

N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity

N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity

cytoplasm

cytosol

AMP biosynthetic process

purine ribonucleotide biosynthetic process

lyase activity

protein tetramerization

(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity

Purine metabolism

Alanine, aspartate and glutamate metabolism

Biosynthesis of alkaloids derived from histidine and purine

Metabolic pathways

201791_s_at 0.259 5.806 2.965 9.517e-03 0.347 -2.588 DHCR7 7-dehydrocholesterol reductase 11 -70823104 NM_001360 11q13.2-q13.5 Hs.503134 48

blood vessel development

protein binding

nuclear outer membrane

endoplasmic reticulum

endoplasmic reticulum membrane

cholesterol biosynthetic process

post-embryonic development

membrane

integral to membrane

oxidoreductase activity

cell differentiation

lung development

multicellular organism growth

regulation of cell proliferation

7-dehydrocholesterol reductase activity

7-dehydrocholesterol reductase activity

oxidation reduction

Steroid biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

1558077_s_at 0.244 4.430 2.963 9.553e-03 0.348 -2.591 MDH1B malate dehydrogenase 1B, NAD (soluble) 2 -207310733 BG202523 2q33.3 Hs.147816 1

binding

carbohydrate metabolic process

tricarboxylic acid cycle

malate metabolic process

oxidoreductase activity

malate dehydrogenase activity

oxidation reduction

 
223229_at -0.471 6.718 -2.963 9.556e-03 0.348 -2.591 UBE2T ubiquitin-conjugating enzyme E2T (putative) 1 -200567408 AB032931 1q32.1 Hs.5199 10

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

 
222389_s_at -0.268 7.428 -2.963 9.561e-03 0.348 -2.592 WAC WW domain containing adaptor with coiled-coil 10 28861432, 28862429 BE879807   Hs.714700 15

protein binding

nucleus

nuclear speck

 
225793_at -0.405 7.860 -2.962 9.581e-03 0.348 -2.594 LIX1L Lix1 homolog (mouse)-like 1 144188441 AW500180 1q21.1 Hs.632435 2    
230137_at -0.261 4.321 -2.962 9.585e-03 0.348 -2.594 TMEM155 transmembrane protein 155 4 -122899534 BF673779 4q27 Hs.27524 Hs.607691 5

extracellular region

 
234192_s_at -0.463 8.574 -2.961 9.598e-03 0.348 -2.595 GKAP1 G kinase anchoring protein 1 9 -85544156 AK026487 9q21.32 Hs.522255 5

protein binding

Golgi apparatus

signal transduction

 
230524_at 0.245 4.328 2.961 9.599e-03 0.348 -2.595 MPI mannose phosphate isomerase 15 72969462 AA973383 15q22-qter Hs.75694 18

mannose-6-phosphate isomerase activity

cytoplasm

carbohydrate metabolic process

zinc ion binding

isomerase activity

metal ion binding

Fructose and mannose metabolism

Amino sugar and nucleotide sugar metabolism

Metabolic pathways

229534_at 0.381 4.631 2.961 9.606e-03 0.348 -2.596 ACOT4 acyl-CoA thioesterase 4 14 73128162 AA046424 14q24.3 Hs.49433 10

very-long-chain fatty acid metabolic process

carboxylesterase activity

peroxisome

succinyl-CoA metabolic process

lipid metabolic process

acyl-CoA metabolic process

palmitoyl-CoA hydrolase activity

hydrolase activity

thiolester hydrolase activity

saturated monocarboxylic acid metabolic process

unsaturated monocarboxylic acid metabolic process

butanoic acid metabolic process

dicarboxylic acid metabolic process

Biosynthesis of unsaturated fatty acids

202474_s_at -0.254 7.695 -2.960 9.621e-03 0.348 -2.597 HCFC1 host cell factor C1 (VP16-accessory protein) X -152866201 NM_005334 Xq28 Hs.83634 53

transcription factor activity

transcription coactivator activity

nucleus

cytoplasm

transcription from RNA polymerase II promoter

reactivation of latent virus

identical protein binding

regulation of protein complex assembly

regulation of transcription

positive regulation of cell cycle

MLL5-L complex

 
229222_at 0.531 6.266 2.959 9.632e-03 0.348 -2.598 ACSS3 acyl-CoA synthetase short-chain family member 3 12 79995939 AI123815 12q21.31 Hs.259559 2

nucleotide binding

acetate-CoA ligase activity

ATP binding

mitochondrion

metabolic process

ligase activity

Propanoate metabolism

Metabolic pathways

229110_at 0.741 3.472 2.958 9.650e-03 0.348 -2.600 LOC100128844 hypothetical protein LOC100128844 9   N50083 9p22.1 Hs.593150      
235199_at 0.717 5.278 2.958 9.663e-03 0.348 -2.601 RNF125 ring finger protein 125 18 27852442 AI969697 18q12.1 Hs.633703 10

protein binding

intracellular

immune response

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

RIG-I-like receptor signaling pathway

214704_at 0.242 4.378 2.958 9.664e-03 0.348 -2.601 TCF25 transcription factor 25 (basic helix-loop-helix) 16 88467494 AK024679 16q24.3 Hs.415342 9

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

protein binding

nucleus

heart development

regulation of transcription

 
221637_s_at 0.316 7.056 2.957 9.678e-03 0.348 -2.603 C11orf48 chromosome 11 open reading frame 48 11 -62186864 BC001434 11q12.3 Hs.9061 3    
222437_s_at -0.337 9.163 -2.956 9.689e-03 0.348 -2.604 VPS24 vacuolar protein sorting 24 homolog (S. cerevisiae) 2 -86584063 BC004419 2p24.3-p24.1 Hs.591582 25

protein binding

cytoplasm

endosome

cytosol

cell cycle

protein transport

membrane

late endosome membrane

cell division

Endocytosis

212678_at -0.280 5.639 -2.955 9.716e-03 0.348 -2.606 NF1 neurofibromin 1 17 26446120, 26446120 AW054826 17q11.2 Hs.113577 204

osteoblast differentiation

metanephros development

response to hypoxia

liver development

negative regulation of endothelial cell proliferation

regulation of cell-matrix adhesion

Ras GTPase activator activity

protein binding

intracellular

nucleus

cytoplasm

signal transduction

Ras protein signal transduction

negative regulation of neuroblast proliferation

brain development

peripheral nervous system development

heart development

visual learning

phosphoinositide 3-kinase cascade

spinal cord development

forebrain astrocyte development

cerebral cortex development

myelination in the peripheral nervous system

actin cytoskeleton organization

collagen fibril organization

adrenal gland development

negative regulation of cell migration

axon

dendrite

positive regulation of Ras GTPase activity

wound healing

negative regulation of transcription factor import into nucleus

negative regulation of MAP kinase activity

negative regulation of MAPKKK cascade

pigmentation

positive regulation of neuron apoptosis

regulation of blood vessel endothelial cell migration

regulation of bone resorption

regulation of glial cell differentiation

positive regulation of adenylate cyclase activity

regulation of angiogenesis

sympathetic nervous system development

camera-type eye morphogenesis

negative regulation of oligodendrocyte differentiation

smooth muscle tissue development

artery morphogenesis

forebrain morphogenesis

cognition

regulation of small GTPase mediated signal transduction

MAPK signaling pathway

215895_x_at 0.259 3.327 2.955 9.720e-03 0.348 -2.606 PLIN2 perilipin 2 9 -19105758 AK022061 9p22.1 Hs.3416 31

protein binding

extracellular region

nucleus

cytoplasm

endoplasmic reticulum

lipid particle

plasma membrane

long-chain fatty acid transport

lipid storage

 
205444_at -1.400 10.528 -2.954 9.743e-03 0.348 -2.609 ATP2A1 ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 16 28797309 NM_004320 16p12.1 Hs.657344 41

nucleotide binding

magnesium ion binding

calcium-transporting ATPase activity

calcium ion binding

protein binding

ATP binding

microsome

ATP biosynthetic process

cation transport

metabolic process

apoptotic mitochondrial changes

membrane

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

positive regulation of fast-twitch skeletal muscle fiber contraction

elevation of endoplasmic reticulum calcium ion concentration

reduction of endoplasmic reticulum calcium ion concentration

sarcoplasmic reticulum membrane

sarcoplasmic reticulum membrane

calcium channel complex

response to endoplasmic reticulum stress

protein homodimerization activity

elevation of mitochondrial calcium ion concentration

maintenance of mitochondrion location

apoptosis in response to endoplasmic reticulum stress

calcium ion import

Calcium signaling pathway

Alzheimer's disease

1555522_s_at -0.398 7.572 -2.954 9.744e-03 0.348 -2.609 MEMO1 mediator of cell motility 1 2 -31946398, -31946397 BC036262 2p22-p21 Hs.444969 10

nucleus

cytosol

 
218455_at 0.380 6.681 2.953 9.747e-03 0.348 -2.609 NFS1 NFS1 nitrogen fixation 1 homolog (S. cerevisiae) 20 -33720024 NM_021100 20q11.22 Hs.194692 14

protein binding

nucleus

cytoplasm

mitochondrion

mitochondrial matrix

cytosol

protein complex assembly

cysteine metabolic process

Mo-molybdopterin cofactor biosynthetic process

metabolic process

transferase activity

iron incorporation into metallo-sulfur cluster

pyridoxal phosphate binding

cysteine desulfurase activity

protein homodimerization activity

Thiamine metabolism

210852_s_at 0.332 4.575 2.952 9.781e-03 0.349 -2.612 AASS aminoadipate-semialdehyde synthase 7 -121500835 AF229180 7q31.3 Hs.156738 10

binding

mitochondrion

electron carrier activity

oxidoreductase activity

L-lysine catabolic process

saccharopine dehydrogenase (NADP+, L-lysine-forming) activity

saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity

protein tetramerization

oxidation reduction

Lysine biosynthesis

Lysine degradation

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Metabolic pathways

222859_s_at 0.474 4.120 2.952 9.781e-03 0.349 -2.612 DAPP1 dual adaptor of phosphotyrosine and 3-phosphoinositides 4 100957003 AA150186 4q25-q27 Hs.436271 Hs.708484 15

protein tyrosine phosphatase activity

protein binding

phospholipid binding

cellular_component

cytoplasm

protein amino acid dephosphorylation

signal transduction

membrane

B cell receptor signaling pathway

1556283_s_at -0.319 4.937 -2.951 9.786e-03 0.349 -2.613 FGFR1OP2 FGFR1 oncogene partner 2 12 26982582 W74643 12p11.23 Hs.591162 5

cytoplasm

 
231798_at 0.652 5.036 2.951 9.795e-03 0.349 -2.613 NOG noggin 17 52026058 AL575177 17q21-q22 Hs.248201 48

osteoblast differentiation

ureteric bud development

epithelial to mesenchymal transition

extracellular region

extracellular region

extracellular space

pattern specification process

brain development

dorsal/ventral pattern formation

cytokine binding

negative regulation of BMP signaling pathway

prostate gland development

somatic stem cell maintenance

wound healing

middle ear morphogenesis

embryonic digit morphogenesis

protein homodimerization activity

negative regulation of cell differentiation

notochord morphogenesis

anatomical structure formation involved in morphogenesis

embryonic skeletal system development

negative regulation of astrocyte differentiation

mesenchymal cell differentiation

positive regulation of epithelial cell proliferation

cartilage development

negative regulation of cardiac muscle cell proliferation

limb development

embryonic skeletal joint morphogenesis

negative regulation of cytokine activity

TGF-beta signaling pathway

221270_s_at 0.323 6.081 2.950 9.810e-03 0.349 -2.615 QTRT1 queuine tRNA-ribosyltransferase 1 19 10673111 NM_031209 19p13.3 Hs.631638 7

ribosome

zinc ion binding

queuine tRNA-ribosyltransferase activity

queuine tRNA-ribosyltransferase activity

queuosine biosynthetic process

queuosine biosynthetic process

transferase activity, transferring glycosyl groups

metal ion binding

 
240310_at -0.463 5.372 -2.950 9.817e-03 0.349 -2.615 TOR1AIP1 torsin A interacting protein 1 1 178118042 AI807835 1q24.2 Hs.496459 9

nucleus

membrane

integral to membrane

 
201124_at 0.313 5.461 2.950 9.824e-03 0.349 -2.616 ITGB5 integrin, beta 5 3 -125964484 AL048423 3q21.2 Hs.536663 55

receptor activity

protein binding

cell adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

integrin complex

membrane

integral to membrane

Focal adhesion

ECM-receptor interaction

Regulation of actin cytoskeleton

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

234367_x_at 0.269 5.286 2.949 9.835e-03 0.349 -2.617 TMPRSS6 transmembrane protease, serine 6 22 -35791424 AL022314 22q12.3 Hs.370885 16

angiogenesis

serine-type endopeptidase activity

plasma membrane

proteolysis

intracellular signaling cascade

peptidase activity

integral to membrane

extracellular matrix organization

fibrinolysis

 
235760_at 0.413 5.317 2.948 9.855e-03 0.349 -2.619 NSD1 nuclear receptor binding SET domain protein 1 5 176492685, 176493438 AI421972 5q35.2-q35.3 Hs.106861 36

negative regulation of transcription from RNA polymerase II promoter

chromatin binding

transcription corepressor activity

protein binding

nucleus

methyltransferase activity

zinc ion binding

chromatin modification

histone methylation

transferase activity

ligand-dependent nuclear receptor binding

estrogen receptor binding

histone methyltransferase activity (H4-K20 specific)

regulation of transcription

positive regulation of transcription, DNA-dependent

metal ion binding

retinoid X receptor binding

thyroid hormone receptor binding

histone methyltransferase activity (H3-K36 specific)

androgen receptor binding

Lysine degradation

226852_at 0.259 4.750 2.948 9.856e-03 0.349 -2.619 MTA3 metastasis associated 1 family, member 3 2 42649174 AB033092 2p21 Hs.435413 15

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

sequence-specific DNA binding

metal ion binding

 
227207_x_at -0.297 6.302 -2.947 9.876e-03 0.349 -2.621 ZNF213 zinc finger protein 213 16 3125057, 3125134 BF510572 16p13.3 Hs.115284 7

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
228878_s_at -0.266 4.612 -2.947 9.879e-03 0.349 -2.621 CFC1B cripto, FRL-1, cryptic family 1B 2 -131066822, 130995136 BE550131 2q21.1 Hs.503733 1    
203824_at -1.861 8.236 -2.946 9.888e-03 0.349 -2.622 TSPAN8 tetraspanin 8 12 -69805143 NM_004616 12q14.1-q21.1 Hs.170563 23

signal transducer activity

lysosome

protein amino acid glycosylation

membrane

integral to membrane

 
210711_at 0.231 4.589 2.946 9.902e-03 0.349 -2.623 C1orf217 chromosome 1 open reading frame 217 1   BC000988 1q32.1 Hs.661178 1    
218769_s_at 0.510 6.523 2.945 9.914e-03 0.349 -2.624 ANKRA2 ankyrin repeat, family A (RFXANK-like), 2 5 -72883918 NM_023039 5q12-q13 Hs.239154 6

protein binding

membrane fraction

cytoplasm

cytosol

cytoskeleton

biological_process

membrane

low-density lipoprotein binding

 
218520_at -0.390 6.533 -2.945 9.915e-03 0.349 -2.624 TBK1 TANK-binding kinase 1 12 63132203 NM_013254 12q14.1 Hs.505874 Hs.607889 51

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

cytosol

protein amino acid phosphorylation

response to virus

transferase activity

positive regulation of I-kappaB kinase/NF-kappaB cascade

interspecies interaction between organisms

innate immune response

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

209139_s_at -0.383 9.622 -2.944 9.927e-03 0.349 -2.625 PRKRA protein kinase, interferon-inducible double stranded RNA dependent activator 2 -179004387, -179004387, -179004387 AF083033 2q31.2 Hs.570274 27

double-stranded RNA binding

protein binding

intracellular

cytoplasm

protein amino acid phosphorylation

induction of apoptosis

response to stress

immune response

enzyme activator activity

negative regulation of cell proliferation

response to virus

RNA interference, production of siRNA

gene silencing by RNA

outer ear morphogenesis

middle ear morphogenesis

protein homodimerization activity

perinuclear region of cytoplasm

skeletal system morphogenesis

 
220512_at 0.238 4.901 2.944 9.932e-03 0.349 -2.626 DLC1 deleted in liver cancer 1 8 -13116452, -12985242, -12985242 NM_024767 8p22 Hs.134296 48

neural tube closure

heart morphogenesis

GTPase activator activity

protein binding

intracellular

nucleus

cytoplasm

caveola

focal adhesion

induction of apoptosis

activation of caspase activity

signal transduction

negative regulation of cell proliferation

negative regulation of cell proliferation

regulation of cell shape

hindbrain morphogenesis

negative regulation of cell migration

negative regulation of cell migration

Rac GTPase activator activity

forebrain development

regulation of actin cytoskeleton organization

negative regulation of Rho protein signal transduction

positive regulation of protein amino acid dephosphorylation

SH2 domain binding

focal adhesion formation

negative regulation of stress fiber formation

 
223608_at 0.601 6.228 2.944 9.932e-03 0.349 -2.626 EFCAB2 EF-hand calcium binding domain 2 1 243199793, 243199906, 243200253, 243200253 BC005357 1q44 Hs.134857 5

calcium ion binding

 
227862_at 0.444 5.362 2.944 9.939e-03 0.349 -2.626 TRNP1 TMF1-regulated nuclear protein 1 1 27192781 AA037766 1p36.11 Hs.355747 2

nucleus

cell cycle

 
234018_s_at -0.936 4.316 -2.942 9.975e-03 0.350 -2.630 SEL1L2 sel-1 suppressor of lin-12-like 2 (C. elegans) 20 -13778049 AL137678 20p12.1 Hs.590879 1

binding

membrane

integral to membrane

 
235721_at 0.248 6.811 2.941 9.994e-03 0.350 -2.631 DTX3 deltex homolog 3 (Drosophila) 12 56284870 N62126 12q13.3 Hs.32374 6

protein binding

cytoplasm

Notch signaling pathway

zinc ion binding

metal ion binding

Notch signaling pathway

1554510_s_at -0.371 9.923 -2.940 1.003e-02 0.351 -2.634 GHITM growth hormone inducible transmembrane protein 10 85889164 AB009685 10q23.1 Hs.352656 15

molecular_function

biological_process

membrane

integral to membrane

 
41577_at 0.392 5.424 2.940 1.003e-02 0.351 -2.634 PPP1R16B protein phosphatase 1, regulatory (inhibitor) subunit 16B 20 36867761 AB020630 20q11.23 Hs.45719 7

plasma membrane

signal transduction

protein phosphatase binding

 
202716_at -0.286 6.465 -2.940 1.003e-02 0.351 -2.634 PTPN1 protein tyrosine phosphatase, non-receptor type 1 20 48560297 NM_002827 20q13.1-q13.2 Hs.417549 144

protein tyrosine phosphatase activity

protein binding

endoplasmic reticulum

protein amino acid dephosphorylation

signal transduction

zinc ion binding

membrane

hydrolase activity

negative regulation of insulin receptor signaling pathway

Adherens junction

Insulin signaling pathway

1557132_at 0.211 2.251 2.939 1.004e-02 0.351 -2.635 WDR17 WD repeat domain 17 4 177224125 BI713506 4q34 Hs.532056 3    
214065_s_at 0.268 4.956 2.938 1.006e-02 0.351 -2.637 CIB2 calcium and integrin binding family member 2 15 -76184045 BG251252 15q24 Hs.129867 6

calcium ion binding

protein binding

 
222125_s_at 0.280 6.465 2.938 1.007e-02 0.351 -2.638 P4HTM prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) 3 49002344 BC000580 3p21.31 Hs.654944 9

iron ion binding

calcium ion binding

endoplasmic reticulum

membrane

integral to membrane

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

L-ascorbic acid binding

oxidation reduction

 
202732_at 0.314 8.196 2.937 1.008e-02 0.351 -2.639 PKIG protein kinase (cAMP-dependent, catalytic) inhibitor gamma 20 42593849 NM_007066 20q12-q13.1 Hs.472831 9

negative regulation of transcription from RNA polymerase II promoter

protein kinase inhibitor activity

cAMP-dependent protein kinase inhibitor activity

protein binding

soluble fraction

negative regulation of protein kinase activity

negative regulation of protein import into nucleus

 
222827_s_at -1.152 11.393 -2.936 1.011e-02 0.352 -2.641 KBTBD10 kelch repeat and BTB (POZ) domain containing 10 2 170074457 AI126808 2q31.1 Hs.50550 8

ruffle

protein binding

nucleus

cytoplasm

cytoskeleton

plasma membrane

focal adhesion

striated muscle contraction

modification-dependent protein catabolic process

pseudopodium

 
1560445_x_at 0.308 6.213 2.935 1.011e-02 0.352 -2.642 ARHGEF1 Rho guanine nucleotide exchange factor (GEF) 1 19 47079106, 47080285 AK026781 19q13.13 Hs.631550 29

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

GTPase activator activity

protein binding

intracellular

cytoplasm

cytosol

plasma membrane

plasma membrane

cell proliferation

regulation of Rho protein signal transduction

Vascular smooth muscle contraction

Regulation of actin cytoskeleton

231437_at 0.250 4.973 2.935 1.012e-02 0.352 -2.643 SLC35D2 solute carrier family 35, member D2 9 -98122809 AA693722 9q22.32 Hs.494556 6

nucleotide-sugar transmembrane transporter activity

cellular_component

Golgi apparatus

biological_process

carbohydrate transport

membrane

integral to membrane

 
210257_x_at -0.357 4.790 -2.935 1.013e-02 0.352 -2.643 CUL4B cullin 4B X -119542473, -119542473 AF212995 Xq23 Hs.102914 28

molecular_function

protein binding

cellular_component

DNA repair

ubiquitin-dependent protein catabolic process

response to DNA damage stimulus

cell cycle

cullin-RING ubiquitin ligase complex

ubiquitin protein ligase binding

Nucleotide excision repair

Ubiquitin mediated proteolysis

1558140_at -0.251 4.242 -2.934 1.014e-02 0.352 -2.644 PLXNA1 plexin A1 3 128190191 X87832 3q21.3 Hs.432329 18

receptor activity

protein binding

cellular_component

intracellular

membrane fraction

signal transduction

multicellular organismal development

membrane

integral to membrane

semaphorin receptor activity

Axon guidance

209675_s_at 0.218 6.030 2.934 1.014e-02 0.352 -2.645 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U-like 1 19 46460230, 46461959 BC004242 19q13.2 Hs.155218 Hs.718642 26

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

RNA processing

response to virus

heterogeneous nuclear ribonucleoprotein complex

regulation of transcription

 
205021_s_at 0.298 6.755 2.934 1.015e-02 0.352 -2.645 FOXN3 forkhead box N3 14 -88692268, -88692268 AA860806 14q31.3 Hs.434286 Hs.621371 16

DNA damage checkpoint

G2 phase of mitotic cell cycle

transcription factor activity

nucleus

cell cycle

protein C-terminus binding

transcription repressor activity

sequence-specific DNA binding

negative regulation of transcription, DNA-dependent

 
244655_at 0.476 4.113 2.934 1.015e-02 0.352 -2.645 LOC100132798 similar to hCG1774772 15   W68045 15q26.2        
228561_at -0.647 6.687 -2.933 1.016e-02 0.352 -2.646 CDC37L1 cell division cycle 37 homolog (S. cerevisiae)-like 1 9 4669565 BF510563 9p24.1 Hs.561954 6

protein binding

cytoplasm

 
208159_x_at 0.521 6.452 2.933 1.016e-02 0.352 -2.646 DDX11 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae) 12 31118045 NM_004399 12p11 Hs.443960 13

mitotic sister chromatid segregation

S phase of mitotic cell cycle

G2/M transition of mitotic cell cycle

nucleotide binding

DNA binding

RNA binding

ATP-dependent DNA helicase activity

ATP binding

nucleus

nucleolus

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

cell cycle

positive regulation of cell proliferation

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

 
214266_s_at -0.493 7.183 -2.931 1.021e-02 0.352 -2.650 PDLIM7 PDZ and LIM domain 7 (enigma) 5 -176849852, -176843000 AW206786 5q35.3 Hs.533040 22

ossification

protein binding

cytoplasm

cytoskeleton

receptor-mediated endocytosis

multicellular organismal development

zinc ion binding

cell differentiation

metal ion binding

 
1564299_at -0.257 3.053 -2.930 1.022e-02 0.352 -2.651 LOC100127940 hypothetical LOC100127940 7   AK090626 7p22.3 Hs.638549 1    
236831_at -0.431 4.498 -2.930 1.023e-02 0.352 -2.652 CCDC50 coiled-coil domain containing 50 3 192529567 AV683852 3q28 Hs.478682 12

protein binding

cytoplasm

 
211212_s_at -0.513 4.231 -2.929 1.024e-02 0.352 -2.653 ORC5L origin recognition complex, subunit 5-like (yeast) 7 -103595859, -103554023 AF081459 7q22.1 Hs.432948 28

nucleotide binding

DNA replication origin binding

ATP binding

nucleus

nucleoplasm

DNA replication

DNA replication

DNA replication initiation

identical protein binding

Cell cycle

1558166_at 0.272 3.666 2.929 1.024e-02 0.352 -2.653 MGC16275 hypothetical protein MGC16275 17 -69717735 BM824870 17q25.1 Hs.706954 1    
201375_s_at -0.310 10.090 -2.929 1.025e-02 0.352 -2.654 PPP2CB protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform 8 -30762667 NM_004156 8p12 Hs.491440 40

protein phosphatase type 2A complex

chromosome, centromeric region

protein serine/threonine phosphatase activity

iron ion binding

protein binding

nucleus

cytoplasm

spindle

protein amino acid dephosphorylation

regulation of gene expression

hydrolase activity

manganese ion binding

response to hydrogen peroxide

negative regulation of apoptosis

proteasomal ubiquitin-dependent protein catabolic process

response to antibiotic

metal ion binding

Wnt signaling pathway

TGF-beta signaling pathway

Tight junction

Long-term depression

1565786_x_at 0.434 5.202 2.929 1.026e-02 0.352 -2.654 FLJ45482 hypothetical LOC645566 7   BQ953917   Hs.644332 1    
200830_at -0.267 9.581 -2.928 1.028e-02 0.352 -2.656 PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 3 185499715 NM_002808 3q27.1 Hs.518464 45

proteasome complex

protein binding

cytosol

proteasome regulatory particle

enzyme regulator activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

regulation of protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

222636_at -0.306 4.772 -2.927 1.028e-02 0.352 -2.656 MED28 mediator complex subunit 28 4 17225370 AF317680 4p16 Hs.434075 Hs.644788 14

actin binding

protein binding

nucleus

cytoplasm

membrane

regulation of transcription

 
217183_at 0.214 5.383 2.927 1.028e-02 0.352 -2.657 LDLR low density lipoprotein receptor 19 11061056 S70123 19p13.3 Hs.213289 Hs.713967 374

transmembrane receptor activity

low-density lipoprotein receptor activity

calcium ion binding

endosome

plasma membrane

plasma membrane

integral to plasma membrane

coated pit

protein amino acid O-linked glycosylation

lipid metabolic process

lipid transport

endocytosis

steroid metabolic process

cholesterol metabolic process

endosome membrane

very-low-density lipoprotein receptor activity

intestinal cholesterol absorption

clathrin-coated endocytic vesicle membrane

low-density lipoprotein particle

low-density lipoprotein particle clearance

lipoprotein catabolic process

cholesterol homeostasis

interspecies interaction between organisms

Endocytosis

207996_s_at -0.735 6.652 -2.927 1.029e-02 0.352 -2.657 C18orf1 chromosome 18 open reading frame 1 18 13208785, 13601664, 13610866 NM_004338 18p11.2 Hs.149363 9

molecular_function

plasma membrane

biological_process

integral to membrane

 
1558828_s_at 0.418 5.178 2.926 1.030e-02 0.352 -2.658 LOC728264 hypothetical LOC728264 5 148766632 AL703532 5q32 Hs.519666 1    
242750_at 0.431 6.155 2.926 1.031e-02 0.352 -2.659 MMAA methylmalonic aciduria (cobalamin deficiency) cblA type 4 146759989 AA678047 4q31.21 Hs.452864 10

nucleotide binding

ATP binding

mitochondrion

nucleoside-triphosphatase activity

 
219455_at -0.299 5.015 -2.926 1.032e-02 0.352 -2.660 C7orf63 chromosome 7 open reading frame 63 7 89712423 NM_024788 7q21.13 Hs.657403 4

binding

 
206853_s_at -0.279 6.486 -2.925 1.032e-02 0.352 -2.660 MAP3K7 mitogen-activated protein kinase kinase kinase 7 6 -91282073, -91282073 AL121964 6q16.1-q16.3 Hs.719192 114

nucleotide binding

magnesium ion binding

positive regulation of T cell cytokine production

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

cytosol

protein amino acid phosphorylation

signal transduction

transforming growth factor beta receptor signaling pathway

activation of NF-kappaB-inducing kinase activity

transferase activity

positive regulation of interleukin-2 production

T cell receptor signaling pathway

positive regulation of T cell activation

MAPK signaling pathway

Wnt signaling pathway

Adherens junction

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

T cell receptor signaling pathway

204822_at 0.195 2.579 2.925 1.033e-02 0.352 -2.660 TTK TTK protein kinase 6 80771077 NM_003318 6q13-q21 Hs.169840 33

nucleotide binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

spindle

protein amino acid phosphorylation

mitotic spindle organization

mitotic cell cycle spindle assembly checkpoint

positive regulation of cell proliferation

positive regulation of pathway-restricted SMAD protein phosphorylation

transferase activity

Cell cycle

232207_at -0.367 5.575 -2.925 1.034e-02 0.352 -2.661 GUSBL2 glucuronidase, beta-like 2 6 -58354117 AK026691 6p11.2 Hs.561539 Hs.711053 5    
203570_at 0.651 4.863 2.924 1.034e-02 0.352 -2.662 LOXL1 lysyl oxidase-like 1 15 72005841 NM_005576 15q22 15q24-q25 Hs.65436 48

copper ion binding

protein binding

extracellular region

proteinaceous extracellular matrix

extracellular space

oxidoreductase activity

oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor

protein amino acid deamination

metal ion binding

oxidation reduction

 
225919_s_at -0.345 5.703 -2.924 1.035e-02 0.352 -2.662 C9orf72 chromosome 9 open reading frame 72 9 -27550498, -27536543 AI832598 9p21.2 Hs.493639 4    
209146_at 0.448 5.459 2.924 1.035e-02 0.352 -2.663 SC4MOL sterol-C4-methyl oxidase-like 4 166468267 AV704962 4q32-q34 Hs.105269 Hs.593050 5

C-4 methylsterol oxidase activity

C-4 methylsterol oxidase activity

iron ion binding

endoplasmic reticulum

endoplasmic reticulum membrane

plasma membrane

fatty acid biosynthetic process

integral to membrane

sterol biosynthetic process

oxidoreductase activity

oxidation reduction

Steroid biosynthesis

Biosynthesis of alkaloids derived from terpenoid and polyketide

Metabolic pathways

228588_s_at -0.519 9.960 -2.924 1.035e-02 0.352 -2.663 UBE2B ubiquitin-conjugating enzyme E2B (RAD6 homolog) 5 133734768 AI499236 5q23-q31 Hs.615284 Hs.644421 23

nucleotide binding

protein polyubiquitination

chromatin

ubiquitin-protein ligase activity

ubiquitin-protein ligase activity

protein binding

ATP binding

nucleus

replication fork

cytoplasm

plasma membrane

postreplication repair

postreplication repair

ubiquitin-dependent protein catabolic process

ubiquitin-dependent protein catabolic process

protein monoubiquitination

response to DNA damage stimulus

spermatogenesis

sperm axoneme assembly

response to UV

ligase activity

ubiquitin protein ligase binding

histone H2A ubiquitination

response to drug

protein stabilization

regulation of protein metabolic process

protein autoubiquitination

Wnt receptor signaling pathway through beta-catenin

Ubiquitin mediated proteolysis

226590_at 0.371 5.294 2.923 1.036e-02 0.352 -2.664 ZNF618 zinc finger protein 618 9 115678382 AA910497 9q32 Hs.349208 2

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

protein dimerization activity

 
226066_at -0.359 8.536 -2.923 1.038e-02 0.352 -2.665 MITF microphthalmia-associated transcription factor 3 69871322, 69895651, 69998131, 70010945, 70068442 AL117653 3p14.2-p14.1 Hs.166017 Hs.618266 93

DNA binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

transcription activator activity

transcription activator activity

melanocyte differentiation

Melanogenesis

Pathways in cancer

Melanoma

235953_at 0.505 4.455 2.922 1.038e-02 0.352 -2.665 ZNF610 zinc finger protein 610 19 57531309, 57540493 AA776810 19q13.41 Hs.357663 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
215590_x_at -0.414 6.356 -2.922 1.038e-02 0.352 -2.665 LOC100128640 hypothetical protein LOC100128640 3   AK025619 3p22.2        
219892_at -0.725 7.987 -2.922 1.039e-02 0.352 -2.666 TM6SF1 transmembrane 6 superfamily member 1 15 81567327 NM_023003 15q24-q26 Hs.513094 4

molecular_function

biological_process

membrane

integral to membrane

 
225606_at 0.593 6.832 2.921 1.041e-02 0.352 -2.668 BCL2L11 BCL2-like 11 (apoptosis facilitator) 2 111594961, 111594961 AI949179 2q13 Hs.469658 143

peripheral to membrane of membrane fraction

in utero embryonic development

B cell homeostasis

B cell apoptosis

kidney development

myeloid cell homeostasis

protein binding

cytoplasm

mitochondrion

mitochondrial outer membrane

cytosol

plasma membrane

induction of apoptosis

cell-matrix adhesion

spermatogenesis

microtubule binding

male gonad development

activation of pro-apoptotic gene products

post-embryonic development

mammary gland development

tube lumen formation

odontogenesis of dentine-containing tooth

T cell homeostasis

ear development

regulation of organ growth

regulation of pigmentation during development

spleen development

thymus development

post-embryonic organ morphogenesis

 
214493_s_at -0.452 4.578 -2.921 1.042e-02 0.352 -2.668 INADL InaD-like (Drosophila) 1 61980736 NM_005799 1p31.3 Hs.478125 24

protein binding

cellular_component

plasma membrane

tight junction

intracellular signaling cascade

apical plasma membrane

cell junction

Tight junction

218404_at 0.518 4.568 2.921 1.042e-02 0.352 -2.669 SNX10 sorting nexin 10 7 26298039 NM_013322 7p15.2 Hs.719227 6

protein binding

cell communication

protein transport

phosphoinositide binding

 
227674_at 0.379 5.421 2.920 1.043e-02 0.352 -2.669 ZNF585A zinc finger protein 585A 19 -42332840, -42332840 AA910852 19q13.12 Hs.390568 Hs.659236 3

nucleic acid binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
210976_s_at -0.502 12.191 -2.920 1.043e-02 0.352 -2.669 PFKM phosphofructokinase, muscle 12 46799294 U24183 12q13.3 Hs.75160 35

nucleotide binding

magnesium ion binding

6-phosphofructokinase activity

6-phosphofructokinase activity

6-phosphofructokinase activity

ATP binding

sugar binding

soluble fraction

cytoplasm

cytosol

cytosol

6-phosphofructokinase complex

fructose 6-phosphate metabolic process

glycolysis

protein C-terminus binding

kinase activity

apical plasma membrane

transferase activity

kinase binding

fructose 1,6-bisphosphate metabolic process

positive regulation of insulin secretion

glucose homeostasis

identical protein binding

muscle maintenance

protein oligomerization

fructose-6-phosphate binding

Glycolysis / Gluconeogenesis

Pentose phosphate pathway

Fructose and mannose metabolism

Galactose metabolism

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

235792_x_at 0.312 5.251 2.920 1.044e-02 0.352 -2.670 PIK3C2A phosphoinositide-3-kinase, class 2, alpha polypeptide 11 -17064699 AU154663 11p15.5-p14 Hs.175343 39

nucleotide binding

inositol or phosphatidylinositol kinase activity

protein binding

ATP binding

nucleus

cytoplasm

Golgi apparatus

plasma membrane

phosphoinositide 3-kinase complex

phosphatidylinositol biosynthetic process

cell communication

1-phosphatidylinositol-3-kinase activity

transferase activity

phosphotransferase activity, alcohol group as acceptor

clathrin-coated vesicle

cytoplasmic vesicle

phosphatidylinositol-4-phosphate 3-kinase activity

phosphoinositide binding

phosphoinositide phosphorylation

phosphoinositide-mediated signaling

Inositol phosphate metabolism

Metabolic pathways

Phosphatidylinositol signaling system

236870_at 0.296 2.543 2.920 1.044e-02 0.352 -2.670 IQCF3 IQ motif containing F3 3 51837608 AW958766 3p21.2 Hs.254808 2    
205621_at -0.283 6.865 -2.920 1.045e-02 0.352 -2.671 ALKBH1 alkB, alkylation repair homolog 1 (E. coli) 14 -77208501 NM_006020 14q24.3 Hs.94542 6

DNA dealkylation

 
203458_at -0.522 7.972 -2.918 1.047e-02 0.352 -2.673 SPR sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase) 2 72968019 AI951454 2p14-p12 Hs.301540 23

aldo-keto reductase activity

sepiapterin reductase activity

binding

cytoplasm

tetrahydrobiopterin biosynthetic process

nitric oxide biosynthetic process

oxidoreductase activity

NADP or NADPH binding

oxidation reduction

Folate biosynthesis

Metabolic pathways

201534_s_at -0.438 7.049 -2.918 1.047e-02 0.352 -2.673 UBL3 ubiquitin-like 3 13 -29236545 AF044221 13q12-q13 Hs.145575 12

intracellular

plasma membrane

 
1555906_s_at -0.630 6.472 -2.917 1.050e-02 0.352 -2.675 C3orf23 chromosome 3 open reading frame 23 3 44354614, 44354947, 44354947 AI147556 3p21.31 Hs.55131 8

mitochondrion

 
223271_s_at -0.373 5.914 -2.917 1.051e-02 0.352 -2.676 CTDSPL2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 15 42506870 AF161543 15q15.3-q21.1 Hs.497967 4

phosphoprotein phosphatase activity

hydrolase activity

 
1568644_at 0.251 2.618 2.916 1.052e-02 0.352 -2.677 ZNF208 zinc finger protein 208 19 -21940736 BC038199 19p12 Hs.541334 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
210544_s_at -0.430 6.810 -2.916 1.053e-02 0.352 -2.678 ALDH3A2 aldehyde dehydrogenase 3 family, member A2 17 19492655, 19492655 BC002430 17p11.2 Hs.499886 27

3-chloroallyl aldehyde dehydrogenase activity

aldehyde dehydrogenase (NAD) activity

aldehyde dehydrogenase [NAD(P)+] activity

mitochondrial inner membrane

endoplasmic reticulum

cellular aldehyde metabolic process

lipid metabolic process

central nervous system development

peripheral nervous system development

epidermis development

membrane

integral to membrane

oxidoreductase activity

oxidation reduction

Glycolysis / Gluconeogenesis

Ascorbate and aldarate metabolism

Fatty acid metabolism

Valine, leucine and isoleucine degradation

Lysine degradation

Arginine and proline metabolism

Histidine metabolism

Tryptophan metabolism

beta-Alanine metabolism

Glycerolipid metabolism

Pyruvate metabolism

Propanoate metabolism

3-Chloroacrylic acid degradation

Butanoate metabolism

Limonene and pinene degradation

Metabolic pathways

200627_at -0.496 10.402 -2.915 1.053e-02 0.352 -2.678 PTGES3 prostaglandin E synthase 3 (cytosolic) 12 -55343391 BC003005 12 12q13.3 Hs.50425 36

telomere maintenance

chromosome, telomeric region

prostaglandin biosynthetic process

telomerase activity

telomerase holoenzyme complex

cytoplasm

fatty acid biosynthetic process

signal transduction

isomerase activity

prostaglandin-E synthase activity

unfolded protein binding

 
241817_at 0.374 3.722 2.915 1.054e-02 0.352 -2.679 C3orf62 chromosome 3 open reading frame 62 3 -49281033 AA729235 3p21.31 Hs.403828 3    
222869_s_at 0.446 3.818 2.915 1.055e-02 0.352 -2.679 ELAC1 elaC homolog 1 (E. coli) 18 46748384 AI669235 18q21 Hs.657360 9

endonuclease activity

nucleus

tRNA processing

zinc ion binding

hydrolase activity

metal ion binding

 
232740_at 0.253 2.920 2.914 1.056e-02 0.352 -2.680 MCM3APAS MCM3AP antisense RNA (non-protein coding) 21 46473585 BC002458 21q22.3 Hs.709346 3    
202432_at -0.633 11.048 -2.913 1.058e-02 0.352 -2.682 PPP3CB protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform 10 -74866569 NM_021132 10q21-q22 Hs.500067 29

protein serine/threonine phosphatase activity

iron ion binding

calcium ion binding

calmodulin binding

calcineurin complex

signal transduction

zinc ion binding

hydrolase activity

MAPK signaling pathway

Calcium signaling pathway

Apoptosis

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Long-term potentiation

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

241859_at -0.719 5.324 -2.913 1.059e-02 0.352 -2.683 PLCL1 phospholipase C-like 1 2 198377670, 198377777 BF593050 2q33 Hs.153322 Hs.593586 8

phosphoinositide phospholipase C activity

signal transducer activity

calcium ion binding

cytoplasm

lipid metabolic process

intracellular signaling cascade

 
210347_s_at 0.285 3.668 2.913 1.059e-02 0.352 -2.683 BCL11A B-cell CLL/lymphoma 11A (zinc finger protein) 2 -60537832, -60531805 AF080216 2p16.1 Hs.370549 26

nucleic acid binding

intracellular

nucleus

cytoplasm

zinc ion binding

hemopoiesis

regulation of transcription

metal ion binding

 
217864_s_at -0.316 7.683 -2.912 1.060e-02 0.352 -2.684 PIAS1 protein inhibitor of activated STAT, 1 15 66133625 NM_016166 15q Hs.162458 67

DNA binding

transcription coactivator activity

transcription corepressor activity

nucleus

JAK-STAT cascade

zinc ion binding

nuclear speck

SUMO ligase activity

enzyme binding

modification-dependent protein catabolic process

androgen receptor signaling pathway

positive regulation of protein sumoylation

regulation of transcription

positive regulation of transcription, DNA-dependent

metal ion binding

androgen receptor binding

Ubiquitin mediated proteolysis

Jak-STAT signaling pathway

Pathways in cancer

Small cell lung cancer

214883_at -0.227 5.062 -2.912 1.062e-02 0.353 -2.685 THRA thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian) 17 35472588, 35472685 X55005 17q11.2 Hs.724 95

transcription factor activity

steroid hormone receptor activity

thyroid hormone receptor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

zinc ion binding

hormone-mediated signaling

regulation of specific transcription from RNA polymerase II promoter

promoter binding

metal ion binding

Neuroactive ligand-receptor interaction

232704_s_at -0.387 6.347 -2.911 1.063e-02 0.353 -2.686 LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 3 -37069120 AK025207 3p22.2 Hs.719246 7

protein binding

cellular_component

biological_process

Wnt receptor signaling pathway

LRR domain binding

 
219436_s_at 0.407 6.908 2.911 1.063e-02 0.353 -2.686 EMCN endomucin 4 -101535522 NM_016242 4q24 Hs.152913 12

extracellular region

plasma membrane

integral to membrane

 
238461_at -0.953 5.652 -2.911 1.063e-02 0.353 -2.687 EIF4E3 eukaryotic translation initiation factor 4E family member 3 3 -71811131, -71811131, -71811131, -71811131 AA228031 3p14 Hs.581355 3

RNA binding

translation initiation factor activity

cytoplasm

translational initiation

regulation of translation

 
207822_at -0.231 4.483 -2.911 1.064e-02 0.353 -2.687 FGFR1 fibroblast growth factor receptor 1 8 -38400008, -38387812 NM_023107 8p11.2-p11.1 Hs.264887 187

MAPKKK cascade

nucleotide binding

skeletal system development

receptor activity

fibroblast growth factor receptor activity

fibroblast growth factor receptor activity

protein binding

ATP binding

membrane fraction

plasma membrane

integral to plasma membrane

protein amino acid phosphorylation

heparin binding

fibroblast growth factor receptor signaling pathway

fibroblast growth factor receptor signaling pathway

cell growth

transferase activity

MAPK signaling pathway

Adherens junction

Regulation of actin cytoskeleton

Pathways in cancer

Prostate cancer

Melanoma

225016_at -0.734 4.994 -2.910 1.065e-02 0.353 -2.688 APCDD1 adenomatosis polyposis coli down-regulated 1 18 10444624 N48299 18p11.22 Hs.293274 4

membrane

integral to membrane

 
210971_s_at 0.541 3.972 2.910 1.065e-02 0.353 -2.688 ARNTL aryl hydrocarbon receptor nuclear translocator-like 11 13255900 AB000815 11p15 Hs.65734 37

transcription factor activity

signal transducer activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

signal transduction

circadian rhythm

aryl hydrocarbon receptor binding

positive regulation of transcription from RNA polymerase II promoter

Hsp90 protein binding

Circadian rhythm - mammal

202116_at -0.279 7.182 -2.908 1.070e-02 0.354 -2.692 DPF2 D4, zinc and double PHD fingers family 2 11 64857921 NM_006268 11q13 Hs.13495 11

protein binding

intracellular

nucleus

cytoplasm

apoptosis

zinc ion binding

induction of apoptosis by extracellular signals

regulation of transcription

metal ion binding

 
239250_at 0.615 6.194 2.908 1.070e-02 0.354 -2.692 ZNF542 zinc finger protein 542 19 61571279, 61571476 BE966038 19q13.43 Hs.467326 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
205441_at -0.314 7.035 -2.907 1.071e-02 0.354 -2.693 OCEL1 occludin/ELL domain containing 1 19 17198054 NM_024578 19p13.11 Hs.422676 3    
213603_s_at 0.391 5.445 2.907 1.072e-02 0.354 -2.694 RAC2 ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) 22 -35951255 BE138888 22q13.1 Hs.517601 58

nucleotide binding

GTPase activity

protein binding

GTP binding

intracellular

membrane fraction

nuclear envelope

cytoplasm

chemotaxis

signal transduction

small GTPase mediated signal transduction

positive regulation of cell proliferation

regulation of hydrogen peroxide metabolic process

cell projection assembly

actin cytoskeleton organization

regulation of respiratory burst

MAPK signaling pathway

Chemokine signaling pathway

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Focal adhesion

Adherens junction

Natural killer cell mediated cytotoxicity

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Pathways in cancer

Colorectal cancer

Pancreatic cancer

226008_at -0.316 7.262 -2.907 1.072e-02 0.354 -2.694 NDNL2 necdin-like 2 15 -27347649 AA627644 15q13.1 Hs.719283 8

protein binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

regulation of growth

 
224712_x_at 0.312 5.572 2.906 1.073e-02 0.354 -2.695 C19orf42 chromosome 19 open reading frame 42 19 -16617958 AI656658 19p13.11 Hs.356467 1

membrane

integral to membrane

 
205177_at 0.381 12.643 2.905 1.076e-02 0.354 -2.697 TNNI1 troponin I type 1 (skeletal, slow) 1 -199639517 NM_003281 1q31.3 Hs.320890 31

actin binding

tropomyosin binding

troponin complex

regulation of striated muscle contraction

 
1556730_at 0.244 2.964 2.905 1.076e-02 0.354 -2.697 LOC652993 hypothetical LOC652993 12   AK074510 12q21 Hs.585591 1    
216081_at 0.440 4.533 2.905 1.077e-02 0.354 -2.698 LAMA4 laminin, alpha 4 6 -112681678, -112535826 AK027151 6q21 Hs.654572 32

receptor binding

extracellular matrix structural constituent

extracellular region

basal lamina

laminin-1 complex

regulation of cell adhesion

regulation of cell migration

regulation of embryonic development

Focal adhesion

ECM-receptor interaction

Pathways in cancer

Small cell lung cancer

225324_at -0.536 7.581 -2.904 1.077e-02 0.354 -2.698 CRLS1 cardiolipin synthase 1 20 5934738, 5935897 AL035461 20p13-p12.3 Hs.224764 14

mitochondrion

mitochondrial inner membrane

phospholipid biosynthetic process

membrane

integral to membrane

transferase activity

phosphotransferase activity, for other substituted phosphate groups

Glycerophospholipid metabolism

Metabolic pathways

208562_s_at -0.307 4.642 -2.903 1.079e-02 0.354 -2.700 ABCC9 ATP-binding cassette, sub-family C (CFTR/MRP), member 9 12 -21849374, -21841590 NM_020297 12p12.1 Hs.446050 35

nucleotide binding

receptor activity

transporter activity

ATP binding

transport

sulfonylurea receptor activity

ATP-sensitive potassium channel complex

potassium ion import

potassium channel regulator activity

membrane

integral to membrane

ATPase activity

ATPase activity, coupled to transmembrane movement of substances

defense response to virus

ABC transporters

228882_at 0.423 5.286 2.903 1.079e-02 0.354 -2.700 TUB tubby homolog (mouse) 11 8016755, 8059484 AL042088 11p15.5 Hs.231850 Hs.568986 16

nucleus

cytoplasm

response to stimulus

 
201454_s_at -0.451 9.084 -2.903 1.080e-02 0.354 -2.700 NPEPPS aminopeptidase puromycin sensitive 17 42963442 AW055008 17q21 Hs.443837 14

aminopeptidase activity

protein binding

nucleus

cytoplasm

cytosol

proteolysis

peptidase activity

metallopeptidase activity

zinc ion binding

metal ion binding

 
217995_at -0.410 9.138 -2.903 1.081e-02 0.354 -2.701 SQRDL sulfide quinone reductase-like (yeast) 15 43714547 NM_021199 15q15 Hs.511251 6

mitochondrion

mitochondrial inner membrane

oxidoreductase activity

oxidation reduction

 
226926_at -0.245 5.441 -2.903 1.081e-02 0.354 -2.701 DMKN dermokine 19 -40686045, -40679961, -40679961, -40679961 AA706316 19q13.12 Hs.417795 7

extracellular region

extracellular space

 
201023_at -0.430 9.598 -2.903 1.081e-02 0.354 -2.702 TAF7 TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa 5 -140678240 NM_005642 5q31 Hs.438838 38

spermine transport

transcription factor activity

transcription coactivator activity

nucleus

transcription factor TFIID complex

nucleolus

cytoplasm

Golgi apparatus

transcription initiation from RNA polymerase II promoter

negative regulation of protein kinase activity

positive transcription elongation factor complex b

negative regulation of specific transcription from RNA polymerase II promoter

promoter binding

general RNA polymerase II transcription factor activity

specific transcriptional repressor activity

transcription initiation factor activity

estrogen receptor signaling pathway

transcription factor TFTC complex

histone acetyltransferase binding

negative regulation of histone acetylation

vitamin D receptor binding

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

thyroid hormone receptor binding

Basal transcription factors

204142_at -0.612 6.051 -2.902 1.083e-02 0.354 -2.703 ENOSF1 enolase superfamily member 1 18 -663860, -663860, -662543 NM_017512 18p11.32 Hs.369762 Hs.658550 12

magnesium ion binding

cellular_component

mitochondrion

metabolic process

cellular amino acid catabolic process

isomerase activity

 
204198_s_at 0.277 3.687 2.902 1.083e-02 0.354 -2.703 RUNX3 runt-related transcription factor 3 1 -25098588, -25098588 AA541630 1p36 Hs.170019 95

transcription factor activity

protein binding

ATP binding

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

induction of apoptosis

cell proliferation

negative regulation of cell cycle

negative regulation of epithelial cell proliferation

 
201735_s_at -0.499 6.971 -2.901 1.085e-02 0.354 -2.704 CLCN3 chloride channel 3 4 170778296 NM_001829 4q33 Hs.481186 28

nucleotide binding

ion channel activity

voltage-gated chloride channel activity

protein binding

ATP binding

early endosome

early endosome

late endosome

late endosome

Golgi apparatus

Golgi apparatus

ion transport

chloride transport

regulation of pH

cell surface

vesicle membrane

vesicle membrane

antiporter activity

membrane

integral to membrane

PDZ domain binding

PDZ domain binding

chloride ion binding

cytoplasmic vesicle

protein homodimerization activity

protein heterodimerization activity

protein heterodimerization activity

endosomal lumen acidification

 
240230_s_at 0.293 5.509 2.901 1.086e-02 0.354 -2.705 LOC642826 hypothetical LOC642826 10 -46662697, 47805861 AW000942 10q11.22 Hs.463017 Hs.647204 Hs.711074 Hs.711898 Hs.718802 2    
209406_at -0.361 8.221 -2.900 1.087e-02 0.354 -2.706 BAG2 BCL2-associated athanogene 2 6 57145062 AF095192 6p12.1-p11.2 Hs.719303 16

protein binding

protein folding

apoptosis

protein metabolic process

 
207417_s_at 0.430 3.952 2.898 1.092e-02 0.355 -2.710 ZNF177 zinc finger protein 177 19 9334695 NM_003451 19p13.2 Hs.172979 4

negative regulation of transcription from RNA polymerase II promoter

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
206076_at -0.356 5.596 -2.898 1.092e-02 0.355 -2.711 LRRC23 leucine rich repeat containing 23 12 6884157 NM_006992 12p13 Hs.155586 10

molecular_function

protein binding

cellular_component

biological_process

 
236565_s_at 1.141 6.053 2.897 1.094e-02 0.356 -2.712 LARP6 La ribonucleoprotein domain family, member 6 15 -68930821, -68910942 BF792126 15q23 Hs.416755 5

RNA binding

nucleus

cytoplasm

RNA processing

ribonucleoprotein complex

 
1562901_at -0.227 2.854 -2.897 1.094e-02 0.356 -2.712 LOC400456 hypothetical protein LOC400456 15   BC040875 15q26.2 Hs.632160 1    
212966_at 0.454 3.806 2.896 1.096e-02 0.356 -2.713 HIC2 hypermethylated in cancer 2 22 20101692 AL043112 22q11.21 Hs.632767 12

DNA binding

intracellular

nucleus

protein C-terminus binding

zinc ion binding

regulation of transcription

negative regulation of transcription, DNA-dependent

metal ion binding

 
218469_at -0.982 4.026 -2.896 1.096e-02 0.356 -2.714 GREM1 gremlin 1, cysteine knot superfamily, homolog (Xenopus laevis) 15 30797496 NM_013372 15q13-q15 Hs.40098 28

cytokine activity

protein binding

extracellular region

extracellular space

multicellular organismal development

nervous system development

 
201946_s_at -0.546 8.231 -2.895 1.098e-02 0.356 -2.715 CCT2 chaperonin containing TCP1, subunit 2 (beta) 12 68265474 AL545982 12q15 Hs.189772 19

nucleotide binding

ATP binding

nucleus

nucleolus

cytoplasm

cytosol

chaperonin-containing T-complex

protein folding

unfolded protein binding

 
236172_at 0.260 3.712 2.895 1.098e-02 0.356 -2.715 LTB4R leukotriene B4 receptor 14 23850544, 23852152 AW206817 14q11.2-q12 Hs.567248 43

nucleotide binding

leukotriene B4 receptor activity

receptor activity

plasma membrane

integral to plasma membrane

cell motion

muscle contraction

inflammatory response

immune response

signal transduction

activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger

Neuroactive ligand-receptor interaction

237033_at -0.294 4.818 -2.894 1.101e-02 0.357 -2.717 FAM159A family with sequence similarity 159, member A 1 52871653 AI202832 1p32.3 Hs.424589 2

membrane

integral to membrane

 
1552323_s_at 0.584 3.828 2.893 1.102e-02 0.357 -2.719 FAM122C family with sequence similarity 122C X 133768889 NM_138819 Xq26.3 Hs.269127 3    
243481_at 0.262 4.148 2.891 1.107e-02 0.358 -2.723 RHOJ ras homolog gene family, member J 14 62740897 AA181207 14q23.2 Hs.656339 8

nucleotide binding

GTPase activity

protein binding

GTP binding

cellular_component

intracellular

plasma membrane

small GTPase mediated signal transduction

Rho protein signal transduction

regulation of cell shape

actin cytoskeleton organization

 
1569949_at 0.688 8.496 2.890 1.109e-02 0.358 -2.724 GRK5 G protein-coupled receptor kinase 5 10 120957186 BC018116 10q24-qter Hs.524625 38

nucleotide binding

G-protein coupled receptor kinase activity

signal transducer activity

protein kinase C binding

protein binding

ATP binding

phospholipid binding

soluble fraction

cytoplasm

plasma membrane

protein amino acid phosphorylation

signal transduction

G-protein signaling, coupled to cAMP nucleotide second messenger

tachykinin receptor signaling pathway

regulation of G-protein coupled receptor protein signaling pathway

transferase activity

Chemokine signaling pathway

Endocytosis

1556176_at -0.337 5.421 -2.888 1.114e-02 0.359 -2.728 TAF8 TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa 6 42126228 BU618741 6p21.1 Hs.520122 17

inner cell mass cell proliferation

DNA binding

protein binding

nucleus

transcription factor TFIID complex

cytoplasm

multicellular organismal development

transcription activator activity

cell differentiation

regulation of transcription

regulation of fat cell differentiation

positive regulation of transcription, DNA-dependent

 
221538_s_at 0.458 6.832 2.886 1.118e-02 0.360 -2.731 PLXNA1 plexin A1 3 128190191 AL136663 3q21.3 Hs.432329 18

receptor activity

protein binding

cellular_component

intracellular

membrane fraction

signal transduction

multicellular organismal development

membrane

integral to membrane

semaphorin receptor activity

Axon guidance

237447_at 0.363 5.134 2.885 1.120e-02 0.361 -2.733 C22orf45 chromosome 22 open reading frame 45 22   BF509218 22q11.23 Hs.712771 2    
208002_s_at 0.307 4.767 2.885 1.120e-02 0.361 -2.733 ACOT7 acyl-CoA thioesterase 7 1 -6246918, -6246918, -6246918, -6246918 NM_007274 1p36.31-p36.11 Hs.126137 11

acyl-CoA binding

carboxylesterase activity

cytoplasm

mitochondrion

lipid metabolic process

palmitoyl-CoA hydrolase activity

hydrolase activity

Biosynthesis of unsaturated fatty acids

1553990_at 0.471 6.260 2.884 1.123e-02 0.361 -2.735 C16orf79 chromosome 16 open reading frame 79 16 -2199254 BC039154 16p13.3 Hs.647399 1

membrane

integral to membrane

 
202374_s_at -0.246 6.766 -2.883 1.126e-02 0.361 -2.737 RAB3GAP2 RAB3 GTPase activating protein subunit 2 (non-catalytic) 1 -218388232 NM_012414 1q41 Hs.654849 Hs.708165 14

GTPase activator activity

protein binding

soluble fraction

cytoplasm

intracellular protein transport

regulation of GTPase activity

protein heterodimerization activity

 
213845_at -0.581 4.027 -2.883 1.126e-02 0.361 -2.737 GRIK2 glutamate receptor, ionotropic, kainate 2 6 101953625 AL355532 6q16.3-q21 Hs.98262 53

receptor activity

ion channel activity

extracellular-glutamate-gated ion channel activity

plasma membrane

integral to plasma membrane

ion transport

glutamate signaling pathway

kainate selective glutamate receptor activity

cell junction

induction of programmed cell death in response to chemical stimulus

synapse

postsynaptic membrane

regulation of short-term neuronal synaptic plasticity

positive regulation of synaptic transmission

neuron apoptosis

Neuroactive ligand-receptor interaction

1558113_at 0.356 4.200 2.883 1.126e-02 0.361 -2.737 FAM78B family with sequence similarity 78, member B 1 -164305879 BM545032 1q24.1 Hs.493518 5    
213521_at 0.306 6.700 2.882 1.127e-02 0.361 -2.738 PTPN18 protein tyrosine phosphatase, non-receptor type 18 (brain-derived) 2 130830049 AW575379 2q21.1 Hs.516390 Hs.591549 16

non-membrane spanning protein tyrosine phosphatase activity

nucleus

cytoplasm

protein amino acid dephosphorylation

hydrolase activity

 
204194_at -0.599 5.949 -2.881 1.130e-02 0.362 -2.741 BACH1 BTB and CNC homology 1, basic leucine zipper transcription factor 1 21 29593090, 29593607, 29599430 NM_001186 21q22.11 Hs.154276 30

transcription factor activity

nucleus

nucleolus

cytosol

regulation of transcription, DNA-dependent

sequence-specific DNA binding

protein dimerization activity

 
231820_x_at 0.331 4.918 2.880 1.131e-02 0.362 -2.742 ZNF587 zinc finger protein 587 19 63053080 BF038484 19q13.43 Hs.642598 Hs.715493 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
212094_at 0.915 4.959 2.879 1.134e-02 0.362 -2.744 PEG10 paternally expressed 10 7 94123572 AL582836 7q21 Hs.147492 25

DNA binding

aspartic-type endopeptidase activity

nucleus

cytoplasm

proteolysis

apoptosis

zinc ion binding

cell differentiation

metal ion binding

 
224443_at 0.722 6.229 2.879 1.134e-02 0.362 -2.744 C1orf97 chromosome 1 open reading frame 97 1 209622719 BC005997 1q32.3 Hs.523932 4    
218424_s_at -0.281 7.754 -2.878 1.138e-02 0.363 -2.747 STEAP3 STEAP family member 3 2 119697853 NM_018234 2q14.2 Hs.647822 11

binding

iron ion binding

copper ion binding

endosome

ion transport

iron ion transport

apoptosis

cell cycle

electron carrier activity

membrane

integral to membrane

oxidoreductase activity

metal ion binding

FAD binding

oxidation reduction

p53 signaling pathway

217627_at 0.577 5.847 2.877 1.139e-02 0.363 -2.748 ZNF573 zinc finger protein 573 19 -42921040 BE515346 19q13.12 Hs.531262 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
201856_s_at -0.486 5.459 -2.876 1.141e-02 0.363 -2.749 ZFR zinc finger RNA binding protein 5 -32390212 BC000376 5p13.3 Hs.435231 6

DNA binding

RNA binding

intracellular

nucleus

nucleolus

cytoplasm

multicellular organismal development

zinc ion binding

 
225208_s_at -0.275 7.809 -2.876 1.141e-02 0.363 -2.749 FAM103A1 family with sequence similarity 103, member A1 15 81445998 AW575350 15q25.2 Hs.80624 3    
227718_at -0.571 6.497 -2.875 1.143e-02 0.363 -2.751 PURB purine-rich element binding protein B 7 -44882416 BF337790 7p13 Hs.349150 Hs.596321 13

translation repressor activity, nucleic acid binding

double-stranded DNA binding

single-stranded DNA binding

transcription factor activity

mRNA binding

nucleus

DNA replication factor A complex

transcription factor binding

specific transcriptional repressor activity

purine-rich negative regulatory element binding

regulation of transcription

regulation of myeloid cell differentiation

negative regulation of transcription, DNA-dependent

SMAD binding

 
205909_at 0.371 4.225 2.874 1.145e-02 0.364 -2.753 POLE2 polymerase (DNA directed), epsilon 2 (p59 subunit) 14 -49180028 NM_002692 14q21-q22 Hs.162777 14

DNA binding

DNA-directed DNA polymerase activity

nucleus

nucleoplasm

DNA-dependent DNA replication

DNA repair

nucleotide-excision repair, DNA gap filling

transferase activity

nucleotidyltransferase activity

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

DNA replication

Base excision repair

Nucleotide excision repair

203674_at 0.293 6.874 2.874 1.146e-02 0.364 -2.753 HELZ helicase with zinc finger 17 -62497015 NM_014877 17q24.2 Hs.370140 Hs.569824 Hs.596366 8

nucleotide binding

nucleic acid binding

helicase activity

ATP binding

nucleus

zinc ion binding

hydrolase activity

metal ion binding

 
201543_s_at 0.300 7.255 2.873 1.148e-02 0.364 -2.755 SAR1A SAR1 homolog A (S. cerevisiae) 10 -71579973 NM_020150 10q22.1 Hs.499960 Hs.594910 13

nucleotide binding

GTPase activity

GTP binding

intracellular

cytoplasm

Golgi apparatus

intracellular protein transport

ER to Golgi vesicle-mediated transport

vesicle-mediated transport

sarcoplasmic reticulum

 
1569354_at 0.253 3.689 2.873 1.149e-02 0.364 -2.755 NSUN6 NOL1/NOP2/Sun domain family, member 6 10 -18874269 BC033534 10p12.31 Hs.396175 4

RNA binding

methyltransferase activity

transferase activity

 
221805_at 0.202 2.231 2.872 1.150e-02 0.364 -2.757 NEFL neurofilament, light polypeptide 8 -24864387 AL537457 8p21 Hs.521461 57

structural constituent of cytoskeleton

neurofilament

protein C-terminus binding

anterograde axon cargo transport

retrograde axon cargo transport

axon transport of mitochondrion

axon

TSC1-TSC2 complex

neurofilament bundle assembly

neurofilament bundle assembly

identical protein binding

intermediate filament organization

Amyotrophic lateral sclerosis (ALS)

222622_at 0.500 9.451 2.872 1.151e-02 0.364 -2.757 PGP phosphoglycolate phosphatase 16 -2201603 BG284709 16p13.3 Hs.442634 9

skeletal system development

membrane fraction

carbohydrate metabolic process

metabolic process

phosphoglycolate phosphatase activity

morphogenesis of embryonic epithelium

hydrolase activity

regulation of cell adhesion

odontogenesis of dentine-containing tooth

regulation of apoptosis

Glyoxylate and dicarboxylate metabolism

Metabolic pathways

221743_at -0.260 10.502 -2.871 1.154e-02 0.365 -2.759 CUGBP1 CUG triplet repeat, RNA binding protein 1 11 -47446520, -47446520, -47446520 AI472139 11p11 Hs.632137 34

nucleotide binding

translation repressor activity, nucleic acid binding

mRNA binding

nucleus

cytoplasm

mRNA splice site selection

mRNA processing

germ cell development

embryonic development

RNA interference

ribonucleoprotein complex

BRE binding

 
1563607_x_at -0.220 4.532 -2.870 1.155e-02 0.365 -2.760 hCG_2045089 hypothetical LOC286359 9 -99192941 AL833510 9q22.33 Hs.132262 2    
207033_at 0.309 4.212 2.869 1.158e-02 0.365 -2.762 GIF gastric intrinsic factor (vitamin B synthesis) 11 -59353321 NM_005142 11q13 Hs.110014 13

extracellular region

ion transport

cobalt ion transport

cobalt ion transmembrane transporter activity

cobalamin transport

cobalamin binding

cobalt ion binding

 
235457_at 0.519 5.597 2.868 1.159e-02 0.365 -2.764 MAML2 mastermind-like 2 (Drosophila) 11 -95351087 AI769569 11q21 Hs.428214 17

transcription coactivator activity

nucleus

Notch signaling pathway

nuclear speck

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

Notch signaling pathway

214180_at 0.295 5.544 2.868 1.160e-02 0.365 -2.764 MAN1C1 mannosidase, alpha, class 1C, member 1 1 25816545 AW340588 1p35 Hs.197043 26

mannosyl-oligosaccharide 1,2-alpha-mannosidase activity

calcium ion binding

Golgi apparatus

protein amino acid N-linked glycosylation

metabolic process

membrane

integral to membrane

hydrolase activity, acting on glycosyl bonds

integral to Golgi membrane

N-Glycan biosynthesis

Metabolic pathways

200768_s_at -0.310 8.543 -2.867 1.162e-02 0.365 -2.765 MAT2A methionine adenosyltransferase II, alpha 2 85619798 BC001686 2p11.2 Hs.516157 18

nucleotide binding

magnesium ion binding

methionine adenosyltransferase activity

protein binding

ATP binding

S-adenosylmethionine biosynthetic process

one-carbon metabolic process

circadian rhythm

response to light stimulus

response to hormone stimulus

transferase activity

potassium ion binding

response to drug

cobalt ion binding

response to cAMP

Cysteine and methionine metabolism

Selenoamino acid metabolism

Biosynthesis of plant hormones

Metabolic pathways

37232_at -0.195 5.388 -2.867 1.163e-02 0.365 -2.766 KIAA0586 KIAA0586 14 57964462 AB011158 14q23.1 Hs.232532 8    
209032_s_at 0.477 6.063 2.867 1.164e-02 0.365 -2.767 CADM1 cell adhesion molecule 1 11 -114549554 AF132811 11q23.2 Hs.370510 50

T cell mediated cytotoxicity

receptor binding

receptor binding

plasma membrane

cell-cell junction

apoptosis

immune response

cell adhesion

homophilic cell adhesion

heterophilic cell adhesion

multicellular organismal development

spermatogenesis

protein C-terminus binding

cell recognition

cell recognition

integral to membrane

basolateral plasma membrane

cell differentiation

PDZ domain binding

susceptibility to natural killer cell mediated cytotoxicity

susceptibility to natural killer cell mediated cytotoxicity

protein homodimerization activity

positive regulation of cytokine secretion

activated T cell proliferation

detection of stimulus

detection of stimulus

Cell adhesion molecules (CAMs)

241834_at 0.666 6.002 2.866 1.164e-02 0.365 -2.767 IPW imprinted in Prader-Willi syndrome (non-protein coding) 15 22912784 AW299520 15q11-q12 Hs.555970 3    
205007_s_at 0.548 6.177 2.865 1.167e-02 0.365 -2.769 CIB2 calcium and integrin binding family member 2 15 -76184045 AI478592 15q24 Hs.129867 6

calcium ion binding

protein binding

 
200867_at -0.483 7.326 -2.865 1.168e-02 0.365 -2.770 RNF114 ring finger protein 114 20 47986320 AL031685 20q13.13 Hs.144949 9

protein binding

intracellular

multicellular organismal development

spermatogenesis

zinc ion binding

cell differentiation

metal ion binding

 
235292_at 0.367 2.774 2.865 1.168e-02 0.365 -2.770 FLJ32255 hypothetical protein LOC643977 5   BE875232 5p12 Hs.535791 1    
202583_s_at -0.542 6.875 -2.865 1.168e-02 0.365 -2.770 RANBP9 RAN binding protein 9 6 -13729708 NM_005493 6p23 Hs.708182 37

nucleus

cytoplasm

microtubule associated complex

protein complex assembly

microtubule nucleation

Ran GTPase binding

enzyme binding

 
212501_at -0.641 10.232 -2.864 1.169e-02 0.365 -2.771 CEBPB CCAAT/enhancer binding protein (C/EBP), beta 20 48240782 AL564683 20q13.1 Hs.517106 Hs.701858 Hs.719041 186

embryonic placenta development

RNA polymerase II transcription factor activity, enhancer binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

anti-apoptosis

induction of apoptosis

acute-phase response

inflammatory response

immune response

transcription activator activity

neuron differentiation

protein homodimerization activity

sequence-specific DNA binding

regulation of interleukin-6 biosynthetic process

fat cell differentiation

positive regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

protein heterodimerization activity

 
212103_at -0.354 7.476 -2.864 1.171e-02 0.365 -2.772 KPNA6 karyopherin alpha 6 (importin alpha 7) 1 32346230 BG403834 1p35.1-p34.3 Hs.470588 Hs.711019 53

protein binding

nucleus

nuclear pore

cytoplasm

NLS-bearing substrate import into nucleus

intracellular protein transport

protein transporter activity

 
239043_at 0.584 3.229 2.863 1.171e-02 0.365 -2.773 ZNF404 zinc finger protein 404 19 -49068354 AA084273 19q13.31 Hs.76561 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
206204_at 1.017 5.316 2.863 1.171e-02 0.365 -2.773 GRB14 growth factor receptor-bound protein 14 2 -165057568 NM_004490 2q22-q24 Hs.411881 19

SH3/SH2 adaptor activity

protein binding

cytoplasm

endosome

microsome

Golgi apparatus

plasma membrane

signal transduction

 
236573_at 0.689 10.726 2.863 1.172e-02 0.365 -2.773 MIB1 mindbomb homolog 1 (Drosophila) 18 17575542 AI819052 18q11.2 Hs.140903 Hs.658808 15

blood vessel development

in utero embryonic development

somitogenesis

neural tube formation

heart looping

ubiquitin-protein ligase activity

protein binding

cytoplasm

plasma membrane

Notch signaling pathway

heart development

zinc ion binding

protein ubiquitination

ligase activity

modification-dependent protein catabolic process

cytoplasmic vesicle

negative regulation of neuron differentiation

positive regulation of endocytosis

metal ion binding

 
239527_at 0.274 2.997 2.863 1.173e-02 0.365 -2.774 RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 2 135526322 BF103605 2q21.3 Hs.306327 17

GTPase activator activity

Rab GTPase activator activity

soluble fraction

cytoplasm

Rab GTPase binding

regulation of GTPase activity

 
225105_at 1.945 8.723 2.862 1.174e-02 0.365 -2.774 C12orf75 chromosome 12 open reading frame 75 12 104248543 BF969397 12q23.3 Hs.368938 3    
216294_s_at -0.359 4.775 -2.862 1.174e-02 0.365 -2.775 KIAA1109 KIAA1109 4 123311207 AL137254 4q27 Hs.408142 12

membrane

integral to membrane

 
205206_at -0.810 7.950 -2.862 1.174e-02 0.365 -2.775 KAL1 Kallmann syndrome 1 sequence X -8456914 NM_000216 Xp22.32 Hs.521869 35

serine-type endopeptidase inhibitor activity

extracellular matrix structural constituent

protein binding

extracellular region

proteinaceous extracellular matrix

extracellular space

chemotaxis

cell adhesion

axon guidance

cell surface

peptidase inhibitor activity

 
239074_at 0.274 5.489 2.862 1.175e-02 0.365 -2.775 LOC400581 GRB2-related adaptor protein-like 17 18971506 AI538454 17p11.2 Hs.661470 Hs.677674 1

protein binding

 
211801_x_at -0.481 4.834 -2.861 1.176e-02 0.365 -2.776 MFN1 mitofusin 1 3 180548173 AF329637 3q26.33 Hs.478383 16

nucleotide binding

GTPase activity

GTP binding

cytoplasm

mitochondrion

mitochondrial outer membrane

mitochondrial fusion

biological_process

membrane

integral to membrane

hydrolase activity

 
238070_at -0.423 5.013 -2.861 1.177e-02 0.365 -2.777 CHD1L chromodomain helicase DNA binding protein 1-like 1 145180914 AA573217 1q12 Hs.191164 12

nucleotide binding

DNA binding

helicase activity

ATP binding

nucleus

ATP-dependent helicase activity

hydrolase activity

 
214574_x_at 0.290 5.450 2.861 1.177e-02 0.365 -2.777 LST1 leukocyte specific transcript 1 6 31661949, 31662603, 3000093, 3000747, 2801557, 2802211 NM_007161 6p21.3 Hs.436066 20

cell morphogenesis

molecular_function

protein binding

cytoplasm

Golgi apparatus

immune response

regulation of cell shape

anatomical structure morphogenesis

membrane

integral to membrane

dendrite development

negative regulation of lymphocyte proliferation

 
242584_at 0.624 5.343 2.861 1.178e-02 0.365 -2.778 FAM161A family with sequence similarity 161, member A 2 -61905486 AI954412 2p15 Hs.440466 7    
233314_at 0.294 3.793 2.860 1.179e-02 0.365 -2.778 PTEN phosphatase and tensin homolog 10 89613174 AK021487 10q23.3 Hs.500466 557

regulation of cyclin-dependent protein kinase activity

magnesium ion binding

angiogenesis

phosphatidylinositol-3-phosphatase activity

protein serine/threonine phosphatase activity

protein tyrosine phosphatase activity

platelet-derived growth factor receptor binding

protein binding

nucleus

cytoplasm

cytoplasm

cytosol

protein amino acid dephosphorylation

protein amino acid dephosphorylation

lipid metabolic process

induction of apoptosis

central nervous system development

protein tyrosine/serine/threonine phosphatase activity

negative regulation of cell proliferation

lipid binding

phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity

phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity

hydrolase activity

PDZ domain binding

negative regulation of cell migration

neuron projection development

regulation of protein stability

negative regulation of apoptosis

endothelial cell migration

inositol phosphate dephosphorylation

phosphoinositide dephosphorylation

platelet-derived growth factor receptor signaling pathway

cardiac muscle tissue development

inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity

phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity

negative regulation of focal adhesion formation

negative regulation of protein kinase B signaling cascade

Inositol phosphate metabolism

Phosphatidylinositol signaling system

p53 signaling pathway

Focal adhesion

Tight junction

Pathways in cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Small cell lung cancer

204305_at -0.418 6.030 -2.860 1.179e-02 0.365 -2.778 MIPEP mitochondrial intermediate peptidase 13 -23202327 NM_005932 13q12 Hs.507498 6

magnesium ion binding

metalloendopeptidase activity

iron ion binding

calcium ion binding

mitochondrion

mitochondrial matrix

proteolysis

mitochondrial protein processing during import

peptidase activity

zinc ion binding

manganese ion binding

cobalt ion binding

 
229139_at -0.663 10.879 -2.860 1.180e-02 0.365 -2.779 JPH1 junctophilin 1 8 -75309492 AI202201 8q21 Hs.657367 9

molecular_function

microsome

plasma membrane

muscle organ development

structural constituent of muscle

junctional sarcoplasmic reticulum membrane

integral to membrane

sarcoplasmic reticulum

Z disc

junctional membrane complex

regulation of ryanodine-sensitive calcium-release channel activity

calcium ion transport into cytosol

 
221822_at -0.454 6.879 -2.860 1.180e-02 0.365 -2.779 CCDC101 coiled-coil domain containing 101 16 28472749 BE544663 16p11.2 Hs.655476 6

nucleus

regulation of transcription

 
210136_at -0.607 7.580 -2.859 1.181e-02 0.365 -2.780 MBP myelin basic protein 18 -72853726, -72819776, -72819776 AW070431 18q23 Hs.551713 102

plasma membrane

immune response

synaptic transmission

central nervous system development

structural constituent of myelin sheath

internode region of axon

myelination

cell projection

cell soma

myelin sheath

 
227179_at -0.328 8.385 -2.858 1.184e-02 0.365 -2.782 STAU2 staufen, RNA binding protein, homolog 2 (Drosophila) 8 -74624394 AK002152 8q13-q21.1 Hs.561815 11

double-stranded RNA binding

intracellular

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

microtubule

transport

 
203197_s_at 0.365 8.562 2.858 1.184e-02 0.365 -2.782 C1orf123 chromosome 1 open reading frame 123 1 -53452359 AW157077 1p32.3 Hs.525391 4

molecular_function

cellular_component

biological_process

 
215379_x_at 0.592 6.110 2.858 1.185e-02 0.365 -2.783 IGL@ immunoglobulin lambda locus 22   AV698647 22q11.1-q11.2 Hs.449585 Hs.561078 20    
235698_at 0.379 5.197 2.858 1.185e-02 0.365 -2.783 ZFP90 zinc finger protein 90 homolog (mouse) 16 67131161 AA771779 16q22.1 Hs.461074 Hs.709017 7

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
226494_at -0.210 5.595 -2.856 1.190e-02 0.366 -2.787 KIAA1543 KIAA1543 19 7566787 AB040976 19p13.2 Hs.17686 9

molecular_function

protein binding

cellular_component

biological_process

 
229367_s_at 0.474 6.723 2.854 1.193e-02 0.367 -2.789 GIMAP6 GTPase, IMAP family member 6 7 -149953398 AW130536   Hs.647105 7

nucleotide binding

GTP binding

 
205694_at -1.364 6.660 -2.853 1.196e-02 0.368 -2.791 TYRP1 tyrosinase-related protein 1 9 12683385 NM_000550 9p23 Hs.270279 49

copper ion binding

protein binding

membrane

integral to membrane

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen

melanocyte differentiation

melanosome organization

melanosome membrane

melanin biosynthetic process

protein homodimerization activity

acetoacetic acid metabolic process

pigmentation

metal ion binding

protein heterodimerization activity

oxidation reduction

Tyrosine metabolism

Metabolic pathways

Melanogenesis

220004_at -0.255 2.801 -2.853 1.197e-02 0.368 -2.792 DDX43 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 6 74161005 NM_018665 6q12-q13 Hs.125507 12

nucleotide binding

RNA binding

ATP-dependent RNA helicase activity

helicase activity

ATP binding

intracellular

hydrolase activity

 
225225_at -0.266 10.855 -2.851 1.202e-02 0.368 -2.796 LOC729082 hypothetical protein LOC729082 15 39363492 BF791544 15q15.1 Hs.380164 2    
232204_at 0.429 4.408 2.851 1.202e-02 0.368 -2.796 EBF1 early B-cell factor 1 5 -158055500 AF208502 5q34 Hs.573143 21

DNA binding

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

transcription regulator activity

metal ion binding

 
221898_at -0.437 6.126 -2.850 1.202e-02 0.368 -2.796 PDPN podoplanin 1 13782838, 13784553 AU154455 1p36.21 Hs.468675 48

cell morphogenesis

ruffle

lymphangiogenesis

plasma membrane

integral to plasma membrane

prostaglandin metabolic process

water transport

cell cycle

signal transduction

multicellular organismal development

cell proliferation

regulation of cell shape

folic acid transporter activity

amino acid transmembrane transporter activity

water channel activity

folic acid transport

cell-cell adhesion

lamellipodium

filopodium

positive regulation of cell migration

tube morphogenesis

lung alveolus development

 
221687_s_at -0.234 5.994 -2.850 1.203e-02 0.368 -2.796 FAM125B family with sequence similarity 125, member B 9 128128948, 128128948 BC000122 9q33.3 Hs.162659 4

endosome

protein transport

membrane

Endocytosis

213198_at -0.250 8.138 -2.850 1.204e-02 0.368 -2.797 ACVR1B activin A receptor, type IB 12 50631752, 50631752, 50631752 AL117643 12q13 Hs.438918 39

G1/S transition of mitotic cell cycle

nucleotide binding

magnesium ion binding

in utero embryonic development

hair follicle development

protein serine/threonine kinase activity

receptor activity

ATP binding

integral to plasma membrane

induction of apoptosis

signal transduction

transmembrane receptor protein serine/threonine kinase signaling pathway

embryonic development

cell surface

membrane

activin receptor activity, type I

transferase activity

peptidyl-threonine phosphorylation

growth factor binding

manganese ion binding

negative regulation of cell growth

ubiquitin protein ligase binding

positive regulation of activin receptor signaling pathway

regulation of transcription

positive regulation of erythrocyte differentiation

SMAD binding

protein amino acid autophosphorylation

activin binding

MAPK signaling pathway

Cytokine-cytokine receptor interaction

Endocytosis

TGF-beta signaling pathway

Adherens junction

Pathways in cancer

Colorectal cancer

Pancreatic cancer

Chronic myeloid leukemia

230677_at -0.213 5.487 -2.848 1.208e-02 0.369 -2.800 C14orf73 chromosome 14 open reading frame 73 14 102636233 AW006941 14q32.32 Hs.37712 2    
242274_x_at 0.407 4.133 2.848 1.208e-02 0.369 -2.800 SLC25A42 solute carrier family 25, member 42 19 19035807 AI057363 19p13.11 Hs.303669 3

binding

mitochondrion

mitochondrial inner membrane

transport

membrane

integral to membrane

 
227084_at -1.014 8.938 -2.848 1.208e-02 0.369 -2.800 DTNA dystrobrevin, alpha 18 30327251, 30327251, 30327251, 30427279, 30544193, 30589937, 30589937, 30652299, 30652299 AW339310 18q12 Hs.643454 38

calcium ion binding

protein binding

cytoplasm

striated muscle contraction

signal transduction

neuromuscular synaptic transmission

zinc ion binding

cell junction

synapse

 
228555_at -0.356 6.532 -2.848 1.209e-02 0.369 -2.801 CAMK2D calcium/calmodulin-dependent protein kinase II delta 4 -114597792, -114591638 AA029441 4q26 Hs.144114 29

G1/S transition of mitotic cell cycle

nucleotide binding

regulation of cell growth

calmodulin-dependent protein kinase activity

calmodulin binding

ATP binding

nucleus

cytoplasm

calcium- and calmodulin-dependent protein kinase complex

calcium ion transport

transferase activity

T-tubule

protein amino acid autophosphorylation

cardiac muscle contraction

ErbB signaling pathway

Calcium signaling pathway

Wnt signaling pathway

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

GnRH signaling pathway

Melanogenesis

Glioma

226196_s_at 0.243 6.218 2.848 1.209e-02 0.369 -2.801 C14orf179 chromosome 14 open reading frame 179 14 75521848 AW827281 14q24.3 Hs.532626 5    
1559206_at -0.220 2.325 -2.847 1.210e-02 0.369 -2.802 PSEN1 presenilin 1 14 72672895 BC002708 14q24.3 Hs.3260 386

kinetochore

endopeptidase activity

membrane fraction

integral to nuclear inner membrane

nuclear outer membrane

mitochondrion

endoplasmic reticulum

Golgi apparatus

integral to plasma membrane

membrane protein ectodomain proteolysis

apoptosis

anti-apoptosis

chromosome segregation

Notch receptor processing

intracellular signaling cascade

beta-catenin binding

cell death

peptidase activity

cell surface

membrane

cell-cell adhesion

protein processing

PDZ domain binding

endoplasmic reticulum calcium ion homeostasis

regulation of phosphorylation

amyloid precursor protein catabolic process

positive regulation of catalytic activity

Wnt signaling pathway

Notch signaling pathway

Neurotrophin signaling pathway

Alzheimer's disease

225539_at -0.504 5.600 -2.847 1.210e-02 0.369 -2.802 ZNF295 zinc finger protein 295 21 -42280008 AP001745 21q22.3 Hs.434947 Hs.618406 10

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
201227_s_at 0.293 10.740 2.847 1.212e-02 0.369 -2.803 NDUFB8 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa 10 -102273486 NM_005004 10q23.2-q23.33 Hs.523215 16

NADH dehydrogenase activity

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

endoplasmic reticulum

mitochondrial electron transport, NADH to ubiquinone

transport

NADH dehydrogenase (ubiquinone) activity

membrane

integral to membrane

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

1558924_s_at -0.821 6.486 -2.846 1.213e-02 0.369 -2.804 CLIP1 CAP-GLY domain containing linker protein 1 12 -121321933 BF673049 12q24.3 Hs.524809 37

kinetochore

nucleic acid binding

protein binding

cytoplasm

endosome

microtubule

intermediate filament

mitosis

microtubule binding

zinc ion binding

protein homodimerization activity

metal ion binding

 
204773_at 0.214 7.128 2.845 1.216e-02 0.370 -2.806 IL11RA interleukin 11 receptor, alpha 9 34642181, 34643931, 34643931 NM_004512 9p13 Hs.591088 26

cytokine receptor activity

integral to plasma membrane

membrane

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

Hematopoietic cell lineage

226131_s_at -0.298 13.104 -2.844 1.218e-02 0.370 -2.807 RPS16 ribosomal protein S16 19 -44615686 AA583817 19q13.1 Hs.397609 24

RNA binding

structural constituent of ribosome

protein binding

intracellular

cytosol

ribosome

rRNA processing

translational elongation

cytosolic small ribosomal subunit

cytosolic small ribosomal subunit

ribosomal small subunit biogenesis

Ribosome

226589_at 0.300 5.513 2.844 1.219e-02 0.370 -2.808 TMEM192 transmembrane protein 192 4 -166216679 BE964222 4q32.3 Hs.708090 3

membrane

integral to membrane

 
228947_x_at -0.248 5.809 -2.843 1.221e-02 0.370 -2.810 TMEM204 transmembrane protein 204 16 1524231 AW612362 16p13.3 Hs.459652 7

plasma membrane

adherens junction

response to stress

integral to membrane

cell junction

 
235878_at 0.297 3.801 2.843 1.222e-02 0.370 -2.810 TAF1B TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa 2 9901021 AA780048 2p25 Hs.584833 15

transcription factor activity

nucleus

nucleoplasm

transcription, DNA-dependent

regulation of transcription

 
243179_at 0.609 4.889 2.841 1.227e-02 0.371 -2.814 LOC100130360 hypothetical LOC100130360 6   BG231554 6p22.3        
236064_at 0.302 4.403 2.840 1.227e-02 0.371 -2.814 SLC25A35 solute carrier family 25, member 35 17 -8131806 AW966184 17p13.1 Hs.118918 3

binding

mitochondrion

mitochondrial inner membrane

transport

membrane

integral to membrane

 
207901_at -0.273 2.040 -2.840 1.228e-02 0.371 -2.815 IL12B interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40) 5 -158674368 NM_002187 5q31.1-q33.1 Hs.674 222

natural killer cell activation during immune response

positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target

signal transducer activity

cytokine receptor activity

cytokine activity

interleukin-12 receptor binding

protein binding

extracellular region

cell cycle arrest

cell surface receptor linked signal transduction

response to UV-B

membrane

cell migration

sensory perception of pain

positive regulation of interferon-gamma production

positive regulation of natural killer cell activation

positive regulation of smooth muscle cell apoptosis

regulation of cytokine biosynthetic process

T-helper 1 type immune response

T-helper cell differentiation

positive regulation of activated T cell proliferation

interleukin-12 alpha subunit binding

protein homodimerization activity

interleukin-12 complex

positive regulation of interferon-gamma biosynthetic process

positive regulation of cell adhesion

protein heterodimerization activity

negative regulation of smooth muscle cell proliferation

Cytokine-cytokine receptor interaction

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

Jak-STAT signaling pathway

Type I diabetes mellitus

Allograft rejection

219284_at -0.512 7.040 -2.840 1.228e-02 0.371 -2.815 HSPBAP1 HSPB (heat shock 27kDa) associated protein 1 3 -123941535 NM_024610 3q21.1 Hs.29169 5

cytoplasm

 
208029_s_at -0.715 8.976 -2.840 1.229e-02 0.371 -2.815 LAPTM4B lysosomal protein transmembrane 4 beta 8 98856984 NM_018407 8q22.1 Hs.492314 17

transport

endomembrane system

membrane

integral to membrane

Lysosome

1565269_s_at -0.568 5.359 -2.839 1.230e-02 0.371 -2.816 ATF1 activating transcription factor 1 12 49444085 AF047022 12q13 Hs.648565 45

transcription factor activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

sequence-specific DNA binding

protein dimerization activity

 
228071_at 0.653 6.480 2.839 1.231e-02 0.371 -2.817 GIMAP7 GTPase, IMAP family member 7 7 149842877 AA858297 7q36.1 Hs.647074 6

nucleotide binding

GTP binding

 
1569722_s_at 0.203 3.782 2.838 1.232e-02 0.371 -2.818 LOC219731 hypothetical protein LOC219731 10   BC032757 10p14 Hs.585473 1    
206408_at 0.275 3.452 2.838 1.234e-02 0.371 -2.819 LRRTM2 leucine rich repeat transmembrane neuronal 2 5 -138232977 NM_015564 5q31.2 Hs.656653 6

protein binding

membrane

integral to membrane

 
218894_s_at 0.262 4.628 2.838 1.234e-02 0.371 -2.819 MAGOHB mago-nashi homolog B (Drosophila) 12 -10648060 NM_018048 12p13.2 Hs.104650 6

RNA binding

nucleus

mRNA processing

transport

RNA splicing

mRNA transport

 
209031_at 0.696 6.696 2.837 1.235e-02 0.371 -2.820 CADM1 cell adhesion molecule 1 11 -114549554 AL519710 11q23.2 Hs.370510 50

T cell mediated cytotoxicity

receptor binding

receptor binding

plasma membrane

cell-cell junction

apoptosis

immune response

cell adhesion

homophilic cell adhesion

heterophilic cell adhesion

multicellular organismal development

spermatogenesis

protein C-terminus binding

cell recognition

cell recognition

integral to membrane

basolateral plasma membrane

cell differentiation

PDZ domain binding

susceptibility to natural killer cell mediated cytotoxicity

susceptibility to natural killer cell mediated cytotoxicity

protein homodimerization activity

positive regulation of cytokine secretion

activated T cell proliferation

detection of stimulus

detection of stimulus

Cell adhesion molecules (CAMs)

225130_at -0.264 5.923 -2.837 1.237e-02 0.371 -2.821 ZRANB1 zinc finger, RAN-binding domain containing 1 10 126620681 AW003734 10q26.13 Hs.595158 3

ubiquitin-protein ligase activity

protein binding

intracellular

nucleus

cytoplasm

peptidase activity

cysteine-type peptidase activity

zinc ion binding

modification-dependent protein catabolic process

positive regulation of Wnt receptor signaling pathway

metal ion binding

 
236937_at -0.436 5.404 -2.836 1.237e-02 0.371 -2.821 VPS8 vacuolar protein sorting 8 homolog (S. cerevisiae) 3 186012624 BF108423 3q27.2 Hs.269263 6

protein binding

zinc ion binding

metal ion binding

 
205413_at -1.467 6.229 -2.836 1.239e-02 0.371 -2.822 MPPED2 metallophosphoesterase domain containing 2 11 -30388194, -30362615 NM_001584 11p13 Hs.289795 8

nervous system development

hydrolase activity

 
224607_s_at -0.267 8.276 -2.836 1.239e-02 0.371 -2.823 SRP68 signal recognition particle 68kDa 17 -71546785 BG398597 17q25.1 Hs.514495 11

RNA binding

signal recognition particle binding

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

signal recognition particle, endoplasmic reticulum targeting

ribosome

response to drug

Protein export

32723_at 0.451 6.344 2.835 1.241e-02 0.371 -2.824 CSTF1 cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa 20 54400833, 54400980, 54401113 L02547 20q13.2 Hs.172865 19

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

mRNA polyadenylation

mRNA cleavage

 
206116_s_at -0.642 13.052 -2.835 1.242e-02 0.371 -2.824 TPM1 tropomyosin 1 (alpha) 15 61121890, 61121890, 61127688 NM_000366 15q22.1 Hs.133892 76

stress fiber

positive regulation of heart rate by epinephrine

actin binding

structural constituent of cytoskeleton

cytoplasm

cytoskeleton

muscle thin filament tropomyosin

cell motion

regulation of muscle contraction

cytoskeleton organization

regulation of heart contraction

structural constituent of muscle

sarcomere

muscle filament sliding

negative regulation of cell migration

ruffle organization

bleb

ruffle membrane

positive regulation of ATPase activity

cellular response to reactive oxygen species

wound healing

sarcomere organization

positive regulation of cell adhesion

positive regulation of stress fiber formation

ventricular cardiac muscle morphogenesis

cardiac muscle contraction

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

33850_at -0.307 8.659 -2.834 1.243e-02 0.371 -2.825 MAP4 microtubule-associated protein 4 3 -47989573, -47867183, -47867183 W28892 3p21 Hs.517949 40

structural molecule activity

protein binding

microtubule

microtubule associated complex

negative regulation of microtubule depolymerization

 
210960_at -0.317 3.590 -2.834 1.244e-02 0.371 -2.827 ADRA1D adrenergic, alpha-1D-, receptor 20 -4149277 M76446 20p13 Hs.557 30

negative regulation of the force of heart contraction during baroreceptor response to increased systemic arterial blood pressure

norepinephrine-epinephrine vasoconstriction involved in regulation of systemic arterial blood pressure

receptor activity

G-protein coupled receptor activity

adrenoceptor activity

alpha1-adrenergic receptor activity

plasma membrane

integral to plasma membrane

DNA metabolic process

signal transduction

G-protein coupled receptor protein signaling pathway

G-protein signaling, coupled to cAMP nucleotide second messenger

cell-cell signaling

multicellular organismal development

positive regulation of cell proliferation

Calcium signaling pathway

Neuroactive ligand-receptor interaction

Vascular smooth muscle contraction

205161_s_at 0.487 5.494 2.833 1.246e-02 0.371 -2.827 PEX11A peroxisomal biogenesis factor 11 alpha 15 -88027290 NM_003847 15q26.1 Hs.31034 9

peroxisome

peroxisomal membrane

integral to peroxisomal membrane

signal transduction

membrane

integral to membrane

peroxisome fission

 
226211_at -0.729 4.900 -2.833 1.246e-02 0.371 -2.828 MEG3 maternally expressed 3 (non-protein coding) 14 100362197, 100362215 AI291123 14q32 Hs.525589 Hs.593706 Hs.654863 Hs.655127 11    
244712_at -0.318 5.272 -2.833 1.246e-02 0.371 -2.828 MEX3D mex-3 homolog D (C. elegans) 19 -1505667 AI650529 19p13.3 Hs.436495 4

RNA binding

protein binding

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
203564_at 0.242 5.434 2.833 1.246e-02 0.371 -2.828 FANCG Fanconi anemia, complementation group G 9 -35063834 NM_004629 9p13 Hs.591084 57

cell cycle checkpoint

ovarian follicle development

damaged DNA binding

protein binding

nucleus

cytoplasm

mitochondrion

DNA repair

response to DNA damage stimulus

mitochondrion organization

spermatid development

response to radiation

 
207196_s_at -0.298 8.706 -2.833 1.247e-02 0.371 -2.828 TNIP1 TNFAIP3 interacting protein 1 5 -150389698 NM_006058 5q32-q33.1 Hs.355141 31

protein binding

intracellular

nucleus

cytoplasm

translation

defense response

glycoprotein biosynthetic process

pathogenesis

negative regulation of viral genome replication

 
226524_at -0.299 5.521 -2.833 1.247e-02 0.371 -2.828 C3orf38 chromosome 3 open reading frame 38 3 88281582 AI458735 3p11.1 Hs.476944 Hs.518099 2

apoptosis

 
218788_s_at 0.398 6.379 2.832 1.248e-02 0.371 -2.829 SMYD3 SET and MYND domain containing 3 1 -243979266 NM_022743 1q44 Hs.567571 18

protein binding

nucleus

cytoplasm

methyltransferase activity

zinc ion binding

chromatin modification

transferase activity

histone-lysine N-methyltransferase activity

metal ion binding

 
211204_at 0.234 4.669 2.832 1.249e-02 0.371 -2.830 ME1 malic enzyme 1, NADP(+)-dependent, cytosolic 6 -83976828 L34035 6q12 Hs.21160 24

malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity

malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity

binding

nucleus

nucleolus

cytoplasm

cytosol

carbohydrate metabolic process

malate metabolic process

NADP biosynthetic process

electron carrier activity

response to hormone stimulus

response to carbohydrate stimulus

oxidoreductase activity

manganese ion binding

ADP binding

metal ion binding

NADP or NADPH binding

NAD or NADH binding

oxidation reduction

Pyruvate metabolism

Carbon fixation in photosynthetic organisms

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Metabolic pathways

PPAR signaling pathway

207269_at 0.242 4.665 2.832 1.249e-02 0.371 -2.830 DEFA4 defensin, alpha 4, corticostatin 8 -6780754 NM_001925 8p23 Hs.591391 11

extracellular region

extracellular space

xenobiotic metabolic process

defense response to bacterium

defense response to fungus

 
204723_at 0.804 5.615 2.832 1.249e-02 0.371 -2.830 SCN3B sodium channel, voltage-gated, type III, beta 11 -123005104 AB032984 11q23.3 Hs.4865 19

voltage-gated ion channel activity

voltage-gated sodium channel activity

plasma membrane

ion transport

sodium ion transport

integral to membrane

sodium ion binding

 
1570279_at -0.255 3.296 -2.831 1.251e-02 0.371 -2.831 ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 9 -106583104 BC034824 9q31.1 Hs.719214 321

nucleotide binding

ATP binding

phospholipid binding

phospholipid transporter activity

membrane fraction

integral to plasma membrane

lipid metabolic process

transport

lysosome organization

G-protein coupled receptor protein signaling pathway

steroid metabolic process

cholesterol metabolic process

anion transmembrane transporter activity

negative regulation of foam cell differentiation

negative regulation of cholesterol storage

cholesterol binding

membrane

endosome transport

ATPase activity

cholesterol transporter activity

syntaxin-13 binding

positive regulation of cAMP biosynthetic process

small GTPase binding

intracellular cholesterol transport

Cdc42 protein signal transduction

cholesterol efflux

cholesterol efflux

phospholipid efflux

phospholipid efflux

apolipoprotein A-I receptor activity

high-density lipoprotein particle assembly

cholesterol homeostasis

reverse cholesterol transport

membrane raft

phagocytic vesicle

interleukin-1 beta secretion

phospholipid homeostasis

platelet dense granule organization

ABC transporters

232173_at 0.319 5.724 2.830 1.254e-02 0.372 -2.833 CLEC2L C-type lectin domain family 2, member L 7 138859213 W60866 7q34 Hs.57806 3

binding

sugar binding

membrane

integral to membrane

 
202257_s_at 0.285 7.130 2.830 1.255e-02 0.372 -2.834 CD2BP2 CD2 (cytoplasmic tail) binding protein 2 16 -30269588, -30269588 NM_006110 16p11.2 Hs.202677 21

nuclear mRNA splicing, via spliceosome

protein binding

cytoplasm

 
225730_s_at 0.371 7.536 2.829 1.255e-02 0.372 -2.834 THUMPD3 THUMP domain containing 3 3 9379716 AI921788 3p25.3 Hs.443081 5

RNA binding

protein binding

methyltransferase activity

transferase activity

 
1554464_a_at -0.647 5.317 -2.829 1.256e-02 0.372 -2.834 CRTAP cartilage associated protein 3 33130453 BC008745 3p22.3 Hs.719160 10

extracellular region

proteinaceous extracellular matrix

 
219419_at -0.351 6.838 -2.828 1.258e-02 0.372 -2.836 C18orf22 chromosome 18 open reading frame 22 18 75895345 NM_024805 18q23 Hs.593610 3

mitochondrion

rRNA processing

 
228372_at 0.317 6.539 2.828 1.259e-02 0.372 -2.837 C10orf128 chromosome 10 open reading frame 128 10 -50033896 AW204712 10q11.23 Hs.385493 1

membrane

integral to membrane

 
222471_s_at -0.427 9.130 -2.827 1.260e-02 0.372 -2.837 KCMF1 potassium channel modulatory factor 1 2 85051741 AI743396 2p11.2 Hs.654968 7

intracellular

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
205693_at -0.914 11.618 -2.827 1.260e-02 0.372 -2.838 TNNT3 troponin T type 3 (skeletal, fast) 11 1897374 NM_006757 11p15.5 Hs.73454 21

skeletal muscle contraction

actin binding

tropomyosin binding

tropomyosin binding

troponin complex

regulation of striated muscle contraction

troponin C binding

calcium-dependent ATPase activity

troponin I binding

regulation of ATPase activity

calcium-dependent protein binding

 
213004_at -0.455 6.725 -2.827 1.262e-02 0.372 -2.839 ANGPTL2 angiopoietin-like 2 9 -128889448 AI074333 9q34 Hs.653262 11

receptor binding

extracellular region

extracellular space

signal transduction

multicellular organismal development

 
212093_s_at -0.565 7.051 -2.826 1.264e-02 0.372 -2.841 MTUS1 mitochondrial tumor suppressor 1 8 -17545583, -17545583, -17545583 AI695017 8p22 Hs.7946 11

nucleus

mitochondrion

Golgi apparatus

plasma membrane

 
218013_x_at -0.541 6.579 -2.826 1.264e-02 0.372 -2.841 DCTN4 dynactin 4 (p62) 5 -150068502, -150068502 NM_016221 5q31-q32 Hs.675564 7

nucleus

cytoplasm

centrosome

cytoskeleton

protein N-terminus binding

Huntington's disease

227962_at -0.345 7.234 -2.825 1.265e-02 0.372 -2.841 ACOX1 acyl-Coenzyme A oxidase 1, palmitoyl 17 -71449186 BF435852 17q24-q25 17q25.1 Hs.464137 26

acyl-CoA dehydrogenase activity

acyl-CoA oxidase activity

acyl-CoA oxidase activity

cytoplasm

mitochondrion

peroxisome

peroxisomal membrane

generation of precursor metabolites and energy

lipid metabolic process

fatty acid beta-oxidation

prostaglandin metabolic process

spermatogenesis

electron carrier activity

protein N-terminus binding

FAD binding

oxidation reduction

Fatty acid metabolism

alpha-Linolenic acid metabolism

Biosynthesis of unsaturated fatty acids

Biosynthesis of plant hormones

Metabolic pathways

PPAR signaling pathway

205037_at 0.296 6.350 2.825 1.266e-02 0.372 -2.842 RABL4 RAB, member of RAS oncogene family-like 4 22 -35484200 NM_006860 22q13.1 Hs.415172 6

nucleotide binding

GTP binding

small GTPase mediated signal transduction

 
1555847_a_at -0.357 7.568 -2.825 1.266e-02 0.372 -2.842 LOC284454 hypothetical protein LOC284454 19   BU617052 19p13.13 Hs.436426      
214617_at 0.302 6.133 2.824 1.268e-02 0.373 -2.843 PRF1 perforin 1 (pore forming protein) 10 -72027109 AI445650 10q22 Hs.2200 88

calcium ion binding

apoptosis

cellular defense response

circadian rhythm

pathogenesis

membrane

integral to membrane

cytoplasmic membrane-bounded vesicle

cytolysis

response to ethanol

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

219371_s_at -0.636 7.552 -2.824 1.269e-02 0.373 -2.844 KLF2 Kruppel-like factor 2 (lung) 19 16296650 NM_016270 19p13.13-p13.11 Hs.715677 38

transcription factor activity

protein binding

intracellular

nucleus

zinc ion binding

transcription activator activity

positive regulation of transcription

metal ion binding

 
228420_at -0.201 5.780 -2.822 1.274e-02 0.374 -2.848 PDCD2 programmed cell death 2 6 -170732759, -170728374 AW590850 6q27 Hs.367900 14

DNA binding

protein binding

nucleus

cytoplasm

apoptosis

zinc ion binding

metal ion binding

 
226533_at -0.474 6.519 -2.818 1.284e-02 0.376 -2.855 HINT3 histidine triad nucleotide binding protein 3 6 126319553 BF694956 6q22.32 Hs.72325 6

nucleus

cytoplasm

hydrolase activity

 
217485_x_at 0.259 6.719 2.818 1.285e-02 0.376 -2.855 PMS2L1 postmeiotic segregation increased 2-like 1 pseudogene 7 -99756198 D38435 7q22.1 Hs.634244 Hs.661055 Hs.709266 7

molecular_function

ATP binding

cellular_component

mismatch repair

biological_process

kinase activity

transferase activity

mismatched DNA binding

 
238478_at 0.459 5.713 2.818 1.285e-02 0.376 -2.855 BNC2 basonuclin 2 9 -16399500 H97386 9p22.3-p22.2 Hs.656581 Hs.693437 10

intracellular

nucleus

cytoplasm

plasma membrane

zinc ion binding

regulation of transcription

metal ion binding

 
205061_s_at 0.311 7.259 2.818 1.285e-02 0.376 -2.855 EXOSC9 exosome component 9 4 122941921 NM_005033 4q27 Hs.91728 17

3'-5'-exoribonuclease activity

nuclear exosome (RNase complex)

RNA binding

exonuclease activity

protein binding

nucleus

nucleolus

cytoplasm

rRNA processing

RNA processing

immune response

hydrolase activity

RNA degradation

200836_s_at -0.369 8.420 -2.817 1.286e-02 0.376 -2.856 MAP4 microtubule-associated protein 4 3 -47989573, -47867183, -47867183 NM_002375 3p21 Hs.517949 40

structural molecule activity

protein binding

microtubule

microtubule associated complex

negative regulation of microtubule depolymerization

 
213131_at -0.676 6.098 -2.817 1.288e-02 0.376 -2.857 OLFM1 olfactomedin 1 9 137106909, 137106923 R38389 9q34.3 Hs.522484 9

protein binding

endoplasmic reticulum

endoplasmic reticulum lumen

multicellular organismal development

nervous system development

membrane

 
242757_at -0.249 4.506 -2.817 1.288e-02 0.376 -2.857 MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 6 -37708261 BE730067 6p21 Hs.437993 6

neuron migration

molecular_function

plasma membrane

multicellular organismal development

nervous system development

brain development

spinal cord association neuron differentiation

cell differentiation

anchored to plasma membrane

 
218858_at -0.545 9.627 -2.816 1.289e-02 0.377 -2.858 DEPDC6 DEP domain containing 6 8 120955080 NM_022783 8q24.12 Hs.112981 11

protein binding

intracellular

negative regulation of protein kinase activity

intracellular signaling cascade

negative regulation of TOR signaling pathway

regulation of apoptosis

negative regulation of cell size

 
209183_s_at 0.596 7.160 2.814 1.294e-02 0.377 -2.861 C10orf10 chromosome 10 open reading frame 10 10 -44791714 AL136653 10q11.21 Hs.93675 14

mitochondrion

 
1565620_at 0.385 6.017 2.814 1.294e-02 0.377 -2.861 AGAP4 ArfGAP with GTPase domain, ankyrin repeat and PH domain 4 10 -45641055 BG621044 10q11.22 Hs.656384 1

ARF GTPase activator activity

zinc ion binding

regulation of ARF GTPase activity

metal ion binding

 
1552506_at 0.194 3.694 2.814 1.295e-02 0.377 -2.862 CRB2 crumbs homolog 2 (Drosophila) 9 125158268 NM_173689 9q33.3 Hs.710092 7

calcium ion binding

extracellular region

plasma membrane

visual perception

integral to membrane

response to stimulus

 
205590_at 0.312 2.619 2.814 1.295e-02 0.377 -2.862 RASGRP1 RAS guanyl releasing protein 1 (calcium and DAG-regulated) 15 -36567593 NM_005739 15q14 Hs.591127 21

guanyl-nucleotide exchange factor activity

calcium ion binding

protein binding

intracellular

membrane fraction

cytoplasm

endoplasmic reticulum

Golgi apparatus

cytosol

plasma membrane

Ras protein signal transduction

zinc ion binding

diacylglycerol binding

cell differentiation

regulation of small GTPase mediated signal transduction

MAPK signaling pathway

T cell receptor signaling pathway

213718_at -0.315 5.584 -2.813 1.296e-02 0.378 -2.863 RBM4 RNA binding motif protein 4 11 66162713 BE222257 11q13 Hs.533712 20

nucleotide binding

RNA binding

nucleus

nucleolus

cytoplasm

mRNA processing

zinc ion binding

RNA splicing

metal ion binding

 
230904_at -0.627 5.557 -2.813 1.297e-02 0.378 -2.863 FSD1L fibronectin type III and SPRY domain containing 1-like 9 107250135, 107250135, 107250145 W42665 9q31 Hs.136901 4

molecular_function

cellular_component

biological_process

 
230249_at -0.854 5.937 -2.812 1.299e-02 0.378 -2.865 KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3 8 136538897 AI650382 8q24.2 Hs.444558 20

RNA binding

protein binding

nucleus

nucleolus

cytoplasm

spermatogenesis

SH3 domain binding

regulation of transcription

 
214434_at 0.313 5.592 2.812 1.300e-02 0.378 -2.865 HSPA12A heat shock 70kDa protein 12A 10 -118420692 AB007877 10q26.12 Hs.654682 8

nucleotide binding

ATP binding

 
211110_s_at -0.478 6.035 -2.812 1.300e-02 0.378 -2.865 AR androgen receptor X 66680598, 66705407 AF162704 Xq11.2-q12 Hs.496240 1010

in utero embryonic development

transcription factor activity

receptor activity

androgen receptor activity

androgen receptor activity

receptor binding

androgen binding

nucleus

cytoplasm

transport

signal transduction

cell-cell signaling

sex differentiation

cell death

zinc ion binding

cell proliferation

male gonad development

cell growth

male somatic sex determination

androgen receptor signaling pathway

prostate gland development

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

protein dimerization activity

regulation of catalytic activity

Pathways in cancer

Prostate cancer

231836_at 0.431 5.249 2.811 1.302e-02 0.378 -2.866 HKR1 GLI-Kruppel family member HKR1 19 42517419 BC004513 19q13.12 Hs.657027 8

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

metal ion binding

 
221884_at 0.372 5.524 2.811 1.302e-02 0.378 -2.866 MECOM MDS1 and EVI1 complex locus 3 -170283980, -170283980, -170283980, -170283980 BE466525 3q24-q28 Hs.659873 Hs.719216 46

molecular_function

DNA binding

transcription factor activity

protein binding

intracellular

nucleus

multicellular organismal development

biological_process

zinc ion binding

metal ion binding

MAPK signaling pathway

Pathways in cancer

Chronic myeloid leukemia

222990_at -0.245 9.423 -2.811 1.303e-02 0.378 -2.867 UBQLN1 ubiquilin 1 9 -85464697 AW204104 9q21.2-q21.3 9q22 Hs.9589 46

nucleus

cytoplasm

cytosol

kinase binding

protein complex

perinuclear region of cytoplasm

 
1555852_at 0.596 4.364 2.811 1.303e-02 0.378 -2.867 PSMB9 proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2) 6 32929915, 4202792, 4007991 AI375915 6p21.3 Hs.654585 72

threonine-type endopeptidase activity

nucleus

cytoplasm

cytosol

proteasome core complex

immune response

peptidase activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

proteolysis involved in cellular protein catabolic process

Proteasome

202660_at 0.423 4.807 2.811 1.303e-02 0.378 -2.868 ITPR2 inositol 1,4,5-triphosphate receptor, type 2 12 -26379551 AA834576 12p11 Hs.512235 22

response to hypoxia

plasma membrane enriched fraction

ion channel activity

inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity

calcium channel activity

calcium ion binding

cytoplasm

microsome

cell cortex

ion transport

calcium ion transport

signal transduction

calcium ion transmembrane transporter activity

membrane

integral to membrane

sarcoplasmic reticulum membrane

phosphoinositide binding

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Gap junction

Long-term potentiation

Long-term depression

GnRH signaling pathway

Alzheimer's disease

227298_at 0.270 5.515 2.811 1.303e-02 0.378 -2.868 FLJ37798 hypothetical gene supported by AK095117 6   AI806330 6p12.3 Hs.544586 1    
202661_at 0.255 3.582 2.810 1.304e-02 0.378 -2.868 ITPR2 inositol 1,4,5-triphosphate receptor, type 2 12 -26379551 AI963873 12p11 Hs.512235 22

response to hypoxia

plasma membrane enriched fraction

ion channel activity

inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity

calcium channel activity

calcium ion binding

cytoplasm

microsome

cell cortex

ion transport

calcium ion transport

signal transduction

calcium ion transmembrane transporter activity

membrane

integral to membrane

sarcoplasmic reticulum membrane

phosphoinositide binding

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Gap junction

Long-term potentiation

Long-term depression

GnRH signaling pathway

Alzheimer's disease

1555783_x_at 0.257 5.164 2.810 1.305e-02 0.378 -2.868 PQLC2 PQ loop repeat containing 2 1 19511326 BC015324 1p36.13 Hs.647620 5

membrane

integral to membrane

 
212350_at -0.664 7.557 -2.810 1.305e-02 0.378 -2.869 TBC1D1 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 4 37569114 AB029031 4p14 Hs.176503 15

GTPase activator activity

Rab GTPase activator activity

intracellular

nucleus

regulation of Rab GTPase activity

 
225379_at -0.327 8.104 -2.809 1.308e-02 0.378 -2.871 MAPT microtubule-associated protein tau 17 41327543 AA199717 17q21.1 Hs.101174 545

microtubule cytoskeleton organization

microtubule cytoskeleton organization

structural constituent of cytoskeleton

cytoplasm

cytosol

cytoskeleton

microtubule

microtubule associated complex

plasma membrane

plasma membrane

negative regulation of microtubule depolymerization

microtubule binding

microtubule binding

lipoprotein binding

SH3 domain binding

enzyme binding

axon

axon

growth cone

growth cone

positive regulation of microtubule polymerization

positive regulation of microtubule polymerization

apolipoprotein E binding

identical protein binding

cell projection

tubulin complex

tubulin complex

positive regulation of axon extension

positive regulation of axon extension

generation of neurons

MAPK signaling pathway

Alzheimer's disease

205495_s_at 0.441 4.997 2.808 1.309e-02 0.378 -2.872 GNLY granulysin 2 85774924 NM_006433 2p11.2 Hs.105806 36

extracellular region

extracellular space

xenobiotic metabolic process

cellular defense response

defense response to bacterium

defense response to fungus

 
1557122_s_at 0.203 3.477 2.805 1.319e-02 0.380 -2.878 GABRB2 gamma-aminobutyric acid (GABA) A receptor, beta 2 5 -160648013 BC036592 5q34 Hs.303527 47

GABA-A receptor activity

ion channel activity

extracellular ligand-gated ion channel activity

chloride channel activity

plasma membrane

integral to plasma membrane

ion transport

gamma-aminobutyric acid signaling pathway

synaptic transmission

cell junction

neurotransmitter receptor activity

chloride ion binding

chloride channel complex

synapse

postsynaptic membrane

Neuroactive ligand-receptor interaction

218364_at -0.432 8.099 -2.804 1.322e-02 0.381 -2.880 LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 3 -37069120 NM_017724 3p22.2 Hs.719246 7

protein binding

cellular_component

biological_process

Wnt receptor signaling pathway

LRR domain binding

 
212845_at -0.379 10.495 -2.803 1.323e-02 0.381 -2.881 SAMD4A sterile alpha motif domain containing 4A 14 54104386, 54291255 AB028976 14q22.2 Hs.98259 4

cytoplasm

synaptosome

translation repressor activity

dendrite

positive regulation of translation

 
218471_s_at 0.264 6.786 2.803 1.323e-02 0.381 -2.881 BBS1 Bardet-Biedl syndrome 1 11 66034694 NM_024649 11q13.1 Hs.502915 22

microtubule cytoskeleton organization

retina homeostasis

protein binding

cytoplasm

plasma membrane

sensory perception of smell

photoreceptor cell morphogenesis

flagellum assembly

fertilization

dendrite development

striatum development

hippocampus development

cerebral cortex development

adult behavior

motile secondary cilium

BBSome

sensory cilium assembly

multicellular organism growth

olfactory behavior

hormone metabolic process

cellular lipid metabolic process

fat cell differentiation

photoreceptor cell maintenance

brain morphogenesis

response to stimulus

cilium membrane

cilium morphogenesis

regulation of cilium beat frequency involved in ciliary motility

 
219296_at 0.340 3.900 2.803 1.324e-02 0.381 -2.882 ZDHHC13 zinc finger, DHHC-type containing 13 11 19095267 NM_019028 11p15.1 Hs.188569 6

signal transducer activity

zinc ion binding

acyltransferase activity

membrane

integral to membrane

transferase activity

positive regulation of I-kappaB kinase/NF-kappaB cascade

metal ion binding

 
216252_x_at -0.409 4.056 -2.803 1.325e-02 0.381 -2.882 FAS Fas (TNF receptor superfamily, member 6) 10 90740267, 90740267 Z70519 10q24.1 Hs.244139 589

immunoglobulin production

renal system process

transmembrane receptor activity

extracellular region

soluble fraction

cytosol

plasma membrane

plasma membrane

protein complex assembly

anti-apoptosis

activation-induced cell death of T cells

inflammatory cell apoptosis

transformed cell apoptosis

immune response

signal transduction

induction of apoptosis via death domain receptors

activation of pro-apoptotic gene products

response to toxin

external side of plasma membrane

gene expression

positive regulation of necrotic cell death

integral to membrane

B cell mediated immunity

kinase binding

death-inducing signaling complex

identical protein binding

negative thymic T cell selection

regulation of lymphocyte differentiation

regulation of myeloid cell differentiation

spleen development

negative regulation of B cell activation

protein homooligomerization

response to glucocorticoid stimulus

response to protein stimulus

MAPK signaling pathway

Cytokine-cytokine receptor interaction

p53 signaling pathway

Apoptosis

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Alzheimer's disease

Pathways in cancer

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

218127_at -0.608 7.185 -2.802 1.328e-02 0.381 -2.884 NFYB nuclear transcription factor Y, beta 12 -103034987 AI804118 12q22-q23 Hs.84928 38

transcription factor activity

protein binding

intracellular

nucleus

CCAAT-binding factor complex

sequence-specific DNA binding

positive regulation of transcription, DNA-dependent

Antigen processing and presentation

1558934_a_at 0.319 3.396 2.801 1.328e-02 0.381 -2.885 GTF2H5 general transcription factor IIH, polypeptide 5 6 158509366 AL134162 6q25.3 Hs.356224 11

DNA binding

nucleus

nucleotide-excision repair

response to DNA damage stimulus

regulation of transcription

Nucleotide excision repair

1566134_at 0.282 6.179 2.801 1.329e-02 0.381 -2.885 CARHSP1 calcium regulated heat stable protein 1, 24kDa 16 -8854302, -8854302 AL832316 16p13.2 Hs.632184 13

DNA binding

protein binding

cytoplasm

regulation of transcription, DNA-dependent

intracellular signaling cascade

phosphatase binding

 
205584_at -0.267 6.114 -2.801 1.329e-02 0.381 -2.885 ALG13 asparagine-linked glycosylation 13 homolog (S. cerevisiae) X 110811068 NM_024810 Xq23 Hs.443061 14

N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity

endoplasmic reticulum

carbohydrate metabolic process

transferase activity, transferring hexosyl groups

carbohydrate binding

lipid glycosylation

N-Glycan biosynthesis

Metabolic pathways

232662_x_at 0.338 7.435 2.801 1.331e-02 0.381 -2.886 C10orf58 chromosome 10 open reading frame 58 10 82158221, 82163570 AK022598 10q23.1 Hs.500333 Hs.718589 10

extracellular region

 
238784_at 0.410 3.311 2.800 1.331e-02 0.381 -2.886 DPY19L2 dpy-19-like 2 (C. elegans) 12 -62238959 AI039361 12q14.2 Hs.533644 4

membrane

integral to membrane

 
218699_at 0.299 6.389 2.800 1.332e-02 0.381 -2.887 RAB7L1 RAB7, member RAS oncogene family-like 1 1 -204003737 BG338251 1q32 Hs.115325 8

nucleotide binding

GTPase activity

protein binding

GTP binding

plasma membrane

small GTPase mediated signal transduction

protein transport

 
219777_at 0.451 7.326 2.800 1.333e-02 0.381 -2.887 GIMAP6 GTPase, IMAP family member 6 7 -149953398 NM_024711   Hs.647105 7

nucleotide binding

GTP binding

 
1554479_a_at -0.402 7.175 -2.800 1.333e-02 0.381 -2.888 CARD8 caspase recruitment domain family, member 8 19 -53403154 AF511652 19q13.33 Hs.446146 Hs.655940 23

protein binding

intracellular

nucleus

cytoplasm

caspase activator activity

NACHT domain binding

protein homodimerization activity

regulation of apoptosis

negative regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of caspase activity

positive regulation of interleukin-1 beta secretion

 
1557120_at 0.590 5.319 2.799 1.334e-02 0.381 -2.888 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 6 -74282193 BE622780 6q14.1 Hs.520703 Hs.586423 Hs.644639 Hs.697944 Hs.708256 Hs.713109 86

nucleotide binding

translation elongation factor activity

GTPase activity

protein binding

GTP binding

cytoplasm

cytosol

eukaryotic translation elongation factor 1 complex

translational elongation

translational elongation

 
1558305_at -0.258 2.479 -2.799 1.335e-02 0.381 -2.889 GIGYF2 GRB10 interacting GYF protein 2 2 233270258 BC029456 2q37.1 Hs.565319 23

protein binding

 
235648_at 0.405 4.526 2.798 1.337e-02 0.381 -2.890 ZNF567 zinc finger protein 567 19 41872141 AA742659 19q13.12 Hs.412517 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
235635_at -0.332 5.358 -2.798 1.337e-02 0.381 -2.891 ARHGAP5 Rho GTPase activating protein 5 14 31616245 N50119 14q12 Hs.592313 19

GTPase activity

GTPase activator activity

Rho GTPase activator activity

GTP binding

intracellular

cytoplasm

cell adhesion

signal transduction

small GTPase mediated signal transduction

Rho protein signal transduction

membrane

SH2 domain binding

Focal adhesion

Leukocyte transendothelial migration

224336_s_at -0.339 5.069 -2.797 1.339e-02 0.381 -2.892 DUSP16 dual specificity phosphatase 16 12 -12520097 AB052156 12p13 Hs.536535 12

inactivation of MAPK activity

protein tyrosine phosphatase activity

protein binding

nucleus

cytoplasm

protein amino acid dephosphorylation

hydrolase activity

MAP kinase tyrosine/serine/threonine phosphatase activity

MAPK export from nucleus

MAPK phosphatase export from nucleus, leptomycin B sensitive

MAPK signaling pathway

230389_at 0.375 5.740 2.797 1.339e-02 0.381 -2.892 FNBP1 formin binding protein 1 9 -131689286 BE046511 9q34 Hs.189409 25

cytoplasm

lysosome

cytoskeleton

plasma membrane

cell cortex

endocytosis

lipid binding

cytoplasmic vesicle

identical protein binding

 
235910_x_at 0.311 4.300 2.797 1.341e-02 0.382 -2.893 ZNF316 zinc finger protein 316 7   BE674951 7p22.1 Hs.112668 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1552316_a_at 0.492 5.203 2.796 1.342e-02 0.382 -2.894 GIMAP1 GTPase, IMAP family member 1 7 150044630 NM_130759 7q36.1 Hs.647087 7

GTP binding

endoplasmic reticulum

membrane

integral to membrane

 
202371_at 0.418 9.462 2.796 1.344e-02 0.382 -2.895 TCEAL4 transcription elongation factor A (SII)-like 4 X 102727074 NM_024863 Xq22.2 Hs.194329 10

nucleus

regulation of transcription

 
225803_at -0.960 10.166 -2.795 1.345e-02 0.382 -2.895 FBXO32 F-box protein 32 8 -124584538, -124584538 AW006123 8q24.13 Hs.403933 17

protein binding

modification-dependent protein catabolic process

 
219778_at -0.674 7.658 -2.795 1.346e-02 0.382 -2.896 ZFPM2 zinc finger protein, multitype 2 8 106400322 NM_012082 8q23 Hs.431009 16

negative regulation of transcription from RNA polymerase II promoter

vasculogenesis

in utero embryonic development

DNA binding

RNA polymerase II transcription factor activity

transcription corepressor activity

intracellular

nucleus

cytoplasm

transcription factor binding

zinc ion binding

lung development

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

embryonic organ development

cardiac muscle tissue development

 
225243_s_at -0.511 8.469 -2.795 1.346e-02 0.382 -2.896 SLMAP sarcolemma associated protein 3 57718213 AB046821 3p21.2-p14.3 Hs.476432 11

smooth endoplasmic reticulum

plasma membrane

integral to plasma membrane

protein folding

muscle contraction

prefoldin complex

unfolded protein binding

 
209316_s_at -0.401 8.606 -2.794 1.347e-02 0.382 -2.897 HBS1L HBS1-like (S. cerevisiae) 6 -135398687, -135323215, -135323213 BC001465 6q23-q24 Hs.378532 12

nucleotide binding

translation elongation factor activity

GTPase activity

GTP binding

translation

signal transduction

 
1564679_at -0.750 6.700 -2.794 1.349e-02 0.382 -2.898 ASB15 ankyrin repeat and SOCS box-containing 15 7 123036347 AF403033 7q31.31 Hs.83916 6

intracellular signaling cascade

modification-dependent protein catabolic process

 
217726_at -0.311 7.621 -2.793 1.351e-02 0.382 -2.900 COPZ1 coatomer protein complex, subunit zeta 1 12 53005177 NM_016057 12q13.2-q13.3 Hs.505652 14

protein binding

cytoplasm

Golgi apparatus

cytosol

intracellular protein transport

retrograde vesicle-mediated transport, Golgi to ER

retrograde vesicle-mediated transport, Golgi to ER

intra-Golgi vesicle-mediated transport

intra-Golgi vesicle-mediated transport

membrane

membrane organization

vesicle-mediated transport

membrane coat

COPI vesicle coat

COPI vesicle coat

cytoplasmic vesicle

COPI coating of Golgi vesicle

 
212062_at 0.422 7.052 2.793 1.352e-02 0.382 -2.900 ATP9A ATPase, class II, type 9A 20 -49646720 AB014511 20q13.2 Hs.719117 6

nucleotide binding

magnesium ion binding

phospholipid-translocating ATPase activity

ATP binding

ATP biosynthetic process

metabolic process

ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism

phospholipid transport

membrane

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

 
228438_at 0.605 3.703 2.792 1.355e-02 0.383 -2.902 LOC100132891 hypothetical protein LOC100132891 8   AI948599 8q13.3 Hs.137674      
227840_at 0.364 5.525 2.791 1.356e-02 0.383 -2.903 C2orf76 chromosome 2 open reading frame 76 2 -119776489 AA738440 2q14.2 Hs.99488 1    
218628_at -0.427 8.227 -2.791 1.356e-02 0.383 -2.903 CCDC53 coiled-coil domain containing 53 12 -100930847 NM_016053 12q23.2 Hs.405692 9

molecular_function

protein binding

cellular_component

biological_process

 
232269_x_at -0.288 6.918 -2.791 1.357e-02 0.383 -2.904 METRN meteorin, glial cell differentiation regulator 16 705173 BE965311 16p13.3 Hs.533772 6

extracellular region

extracellular space

multicellular organismal development

nervous system development

glial cell differentiation

positive regulation of axonogenesis

 
218781_at -0.256 5.880 -2.789 1.361e-02 0.383 -2.906 SMC6 structural maintenance of chromosomes 6 2 -17708559 NM_024624 2p24.2 Hs.526728 15

nucleotide binding

ATP binding

intracellular

nucleus

chromosome

DNA repair

DNA recombination

response to DNA damage stimulus

 
208752_x_at -0.389 9.727 -2.789 1.361e-02 0.383 -2.906 NAP1L1 nucleosome assembly protein 1-like 1 12 -74724938 AI888672 12q21.2 Hs.524599 Hs.695185 17

protein binding

nucleus

chromatin assembly complex

DNA replication

nucleosome assembly

positive regulation of cell proliferation

melanosome

 
217792_at -0.373 7.816 -2.789 1.363e-02 0.383 -2.907 SNX5 sorting nexin 5 20 -17870243, -17870243 NM_014426 20p11 Hs.316890 14

protein binding

cell communication

protein transport

phosphoinositide binding

 
204011_at -0.321 6.771 -2.788 1.366e-02 0.384 -2.909 SPRY2 sprouty homolog 2 (Drosophila) 13 -79808112 NM_005842 13q31.1 Hs.18676 59

protein binding

cytoplasm

cytosol

microtubule

plasma membrane

plasma membrane

cell-cell signaling

multicellular organismal development

sensory perception of sound

organ morphogenesis

regulation of signal transduction

lung development

inner ear morphogenesis

negative regulation of MAP kinase activity

cell fate commitment

branching morphogenesis of a tube

Jak-STAT signaling pathway

201014_s_at -0.457 6.343 -2.786 1.370e-02 0.385 -2.912 PAICS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase 4 56996671, 56997025 NM_006452 4q12 Hs.518774 Hs.709570 16

nucleotide binding

phosphoribosylaminoimidazole carboxylase activity

phosphoribosylaminoimidazolesuccinocarboxamide synthase activity

ATP binding

purine nucleotide biosynthetic process

'de novo' IMP biosynthetic process

purine base biosynthetic process

lyase activity

ligase activity

identical protein binding

Purine metabolism

Metabolic pathways

232936_at -0.480 7.577 -2.786 1.370e-02 0.385 -2.912 KCNA7 potassium voltage-gated channel, shaker-related subfamily, member 7 19 -54262486 AJ310479 19q13.3 Hs.306973 5

voltage-gated ion channel activity

voltage-gated potassium channel activity

protein binding

ion transport

potassium ion transport

voltage-gated potassium channel complex

membrane

integral to membrane

potassium ion binding

 
226490_at 0.357 3.681 2.786 1.370e-02 0.385 -2.912 NHSL1 NHS-like 1 6 -138784873, -138784873 AA503387 6q23.3 Hs.652741 3    
229294_at 0.243 2.578 2.785 1.372e-02 0.385 -2.913 JPH3 junctophilin 3 16 86193999 AL537395 16q24.3 Hs.592068 18

molecular_function

protein binding

endoplasmic reticulum

plasma membrane

junctional sarcoplasmic reticulum membrane

integral to membrane

regulation of ryanodine-sensitive calcium-release channel activity

calcium ion transport into cytosol

 
206510_at -0.703 6.218 -2.784 1.375e-02 0.386 -2.915 SIX2 SIX homeobox 2 2 -45085828 AF332197 2p16-p15 Hs.101937 10

metanephros development

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

protein import into nucleus

multicellular organismal development

middle ear morphogenesis

sequence-specific DNA binding

negative regulation of cell differentiation

positive regulation of transcription from RNA polymerase II promoter

embryonic skeletal system morphogenesis

 
200721_s_at -0.282 7.848 -2.784 1.375e-02 0.386 -2.915 ACTR1A ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) 10 -104228976 NM_005736 10q24.32 Hs.153961 26

nucleotide binding

protein binding

ATP binding

cytoplasm

centrosome

cytoskeleton

dynactin complex

vesicle-mediated transport

 
203912_s_at -0.360 9.011 -2.784 1.377e-02 0.386 -2.916 DNASE1L1 deoxyribonuclease I-like 1 X -153282772, -153282772 NM_006730 Xq28 Hs.401929 14

DNA binding

endonuclease activity

deoxyribonuclease activity

endoplasmic reticulum

DNA catabolic process

hydrolase activity

 
224478_s_at 0.443 7.075 2.783 1.377e-02 0.386 -2.917 C7orf50 chromosome 7 open reading frame 50 7 -1003148 BC006224 7p22.3 Hs.653258 5    
222514_at -0.449 7.213 -2.783 1.380e-02 0.386 -2.918 RRAGC Ras-related GTP binding C 1 -39077605 AK023373 1p34 Hs.532461 8

nucleotide binding

magnesium ion binding

GTPase activity

protein binding

GTP binding

nucleus

cytoplasm

transcription

apoptosis

small GTPase mediated signal transduction

RNA splicing

cell growth

GDP binding

protein heterodimerization activity

 
227705_at 0.862 5.007 2.782 1.381e-02 0.386 -2.919 TCEAL7 transcription elongation factor A (SII)-like 7 X 102471820 BF591534 Xq22.1 Hs.21861 7

nucleus

regulation of transcription

 
213355_at -1.058 6.136 -2.782 1.382e-02 0.386 -2.919 ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 3 99934261 AI989567 3q12.1 Hs.148716 5

Golgi apparatus

amino sugar metabolic process

protein amino acid glycosylation

glycolipid metabolic process

sialyltransferase activity

protein lipoylation

membrane

integral to membrane

integral to Golgi membrane

Glycosphingolipid biosynthesis - lacto and neolacto series

Metabolic pathways

201667_at 0.473 7.602 2.781 1.383e-02 0.386 -2.920 GJA1 gap junction protein, alpha 1, 43kDa 6 121798443 NM_000165 6q21-q23.2 Hs.74471 181

signal transducer activity

protein binding

cytoplasm

mitochondrial outer membrane

lysosome

early endosome

multivesicular body

endoplasmic reticulum

Golgi apparatus

plasma membrane

plasma membrane

integral to plasma membrane

fascia adherens

connexon complex

apoptosis

muscle contraction

cell-cell signaling

heart development

negative regulation of cell proliferation

response to pH

vascular transport

ion transmembrane transporter activity

ATP transport

gap junction assembly

SH3 domain binding

transmembrane transporter activity

cell junction

PDZ domain binding

Golgi-associated vesicle membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

membrane raft

positive regulation of protein catabolic process

neuron projection morphogenesis

protein oligomerization

regulation of calcium ion transport

Gap junction

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

208089_s_at -0.470 5.503 -2.781 1.384e-02 0.386 -2.921 TDRD3 tudor domain containing 3 13 59868591, 59869427 NM_030794 13q21.2 Hs.525061 12

nucleic acid binding

nucleus

cytoplasm

 
203313_s_at -0.448 4.866 -2.781 1.386e-02 0.386 -2.922 TGIF1 TGFB-induced factor homeobox 1 18 3402071, 3437607, 3439972, 3440030, 3440171, 3441590, 3443771 NM_003244 18p11.3 Hs.373550 38

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

transcription corepressor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

sequence-specific DNA binding

 
224298_s_at -0.375 7.624 -2.780 1.386e-02 0.386 -2.922 UBAC2 UBA domain containing 2 13 98650679, 98651163 BC004528 13q32.3 Hs.508545 6

membrane

integral to membrane

 
1558689_a_at 0.205 3.184 2.779 1.390e-02 0.387 -2.925 LOC441461 hypothetical LOC441461 9   BG701300 9q31.1 Hs.163155 1    
218675_at 0.279 5.218 2.778 1.392e-02 0.387 -2.926 SLC22A17 solute carrier family 22, member 17 14 -22885378, -22885366 NM_020372 14q11.2 Hs.373498 6

transporter activity

ion transport

membrane

integral to membrane

 
204066_s_at 0.423 6.021 2.778 1.393e-02 0.387 -2.927 AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 2 236067474 NM_014914 2q37 Hs.435039 11

nucleotide binding

GTP binding

intracellular

cytoplasm

small GTPase mediated signal transduction

ARF GTPase activator activity

zinc ion binding

protein transport

regulation of ARF GTPase activity

metal ion binding

Endocytosis

1569936_a_at 0.279 4.066 2.777 1.394e-02 0.387 -2.928 ZNF664 zinc finger protein 664 12 123023622 BC033539 12q24.31 Hs.524828 8

molecular_function

DNA binding

cellular_component

intracellular

nucleus

biological_process

zinc ion binding

regulation of transcription

metal ion binding

 
205896_at 0.480 4.695 2.776 1.398e-02 0.388 -2.930 SLC22A4 solute carrier family 22 (organic cation/ergothioneine transporter), member 4 5 131658043 NM_003059 5q31.1 Hs.310591 79

nucleotide binding

transporter activity

protein binding

ATP binding

mitochondrion

plasma membrane

integral to plasma membrane

triglyceride metabolic process

ion transport

sodium ion transport

body fluid secretion

secondary active organic cation transmembrane transporter activity

carnitine metabolic process

ion transmembrane transporter activity

carnitine transporter activity

symporter activity

cation:cation antiporter activity

quaternary ammonium group transport

carnitine transport

apical plasma membrane

PDZ domain binding

sodium ion binding

 
201136_at -0.560 7.879 -2.775 1.400e-02 0.388 -2.931 PLP2 proteolipid protein 2 (colonic epithelium-enriched) X 48915216 NM_002668 Xp11.23 Hs.77422 12

protein binding

membrane fraction

endoplasmic reticulum

endoplasmic reticulum membrane

plasma membrane

ion transport

chemotaxis

ion transmembrane transporter activity

integral to membrane

cytokine-mediated signaling pathway

chemokine binding

 
222448_s_at -0.434 7.474 -2.774 1.403e-02 0.389 -2.933 CMPK1 cytidine monophosphate (UMP-CMP) kinase 1, cytosolic 1 47572055 AF112216 1p32 Hs.714325 16

nucleotide binding

cytidylate kinase activity

uridine kinase activity

ATP binding

nucleus

cytoplasm

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

pyrimidine ribonucleotide biosynthetic process

transferase activity

phosphotransferase activity, phosphate group as acceptor

Pyrimidine metabolism

Metabolic pathways

210395_x_at 0.238 6.625 2.774 1.404e-02 0.389 -2.934 MYL4 myosin, light chain 4, alkali; atrial, embryonic 17 42641426, 42641712 AF116676 17q21-qter Hs.463300 21

regulation of the force of heart contraction

motor activity

actin monomer binding

calcium ion binding

muscle myosin complex

muscle organ development

structural constituent of muscle

myosin complex

A band

myosin II heavy chain binding

positive regulation of ATPase activity

actin filament binding

cardiac muscle contraction

Cardiac muscle contraction

222202_at -0.182 2.235 -2.774 1.405e-02 0.389 -2.935 LOC644213 glyceraldehyde-3-phosphate dehydrogenase pseudogene 1   AK024355 1p12 Hs.647686      
1562743_at 0.307 4.691 2.772 1.409e-02 0.390 -2.937 ZNF33B zinc finger protein 33B 10 -42404560 BC042873 10q11.2 Hs.499453 9

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
213832_at 0.492 5.595 2.772 1.410e-02 0.390 -2.938 KCND3 potassium voltage-gated channel, Shal-related subfamily, member 3 1 -112119976 AA530995 1p13.3 Hs.666367 23

voltage-gated ion channel activity

voltage-gated potassium channel activity

A-type (transient outward) potassium channel activity

protein binding

ion transport

potassium ion transport

voltage-gated potassium channel complex

zinc ion binding

potassium ion binding

sarcolemma

neuron projection

cell soma

metal ion binding

 
208466_at 0.228 4.300 2.771 1.411e-02 0.390 -2.938 RAB3D RAB3D, member RAS oncogene family 19 -11296092 NM_004283 19p13.2 Hs.655274 13

nucleotide binding

GTPase activity

protein binding

GTP binding

plasma membrane

exocytosis

small GTPase mediated signal transduction

protein transport

 
1559705_s_at 0.199 5.647 2.771 1.412e-02 0.390 -2.938 PHKA2 phosphorylase kinase, alpha 2 (liver) X -18820336 X73875 Xp22.2-p22.1 Hs.54941 Hs.607628 Hs.622882 29

catalytic activity

phosphorylase kinase activity

calmodulin binding

plasma membrane

phosphorylase kinase complex

carbohydrate metabolic process

glycogen metabolic process

generation of precursor metabolites and energy

protein modification process

Calcium signaling pathway

Insulin signaling pathway

225140_at -0.324 3.678 -2.771 1.413e-02 0.390 -2.939 KLF3 Kruppel-like factor 3 (basic) 4 38342184 BF438116 4p14 Hs.298658 12

transcription factor activity

intracellular

nucleus

multicellular organismal development

zinc ion binding

regulation of transcription

metal ion binding

 
219213_at 0.375 6.066 2.770 1.415e-02 0.390 -2.940 JAM2 junctional adhesion molecule 2 21 25933459 NM_021219 21q21.2 Hs.517227 21

plasma membrane

plasma membrane

integral to plasma membrane

tight junction

cell-cell adhesion

cell junction

Cell adhesion molecules (CAMs)

Tight junction

Leukocyte transendothelial migration

Epithelial cell signaling in Helicobacter pylori infection

220391_at 0.261 3.010 2.770 1.416e-02 0.390 -2.941 ZBTB3 zinc finger and BTB domain containing 3 11 -62275012 NM_024784 11q12.3 Hs.147554 5

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
210250_x_at -0.402 10.180 -2.768 1.420e-02 0.391 -2.944 ADSL adenylosuccinate lyase 22 39072449 AF067854 22q13.1 22q13.2 Hs.75527 29

N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity

N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity

cytoplasm

cytosol

AMP biosynthetic process

purine ribonucleotide biosynthetic process

lyase activity

protein tetramerization

(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity

Purine metabolism

Alanine, aspartate and glutamate metabolism

Biosynthesis of alkaloids derived from histidine and purine

Metabolic pathways

218584_at 0.286 6.253 2.768 1.421e-02 0.392 -2.945 TCTN1 tectonic family member 1 12 109536262 NM_024549 12q24.11 Hs.211511 Hs.694390 5

extracellular region

multicellular organismal development

 
214002_at -0.293 6.425 -2.767 1.426e-02 0.392 -2.947 MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 12 54838366 AA419227 12q13.2 Hs.632717 12

motor activity

calcium ion binding

skeletal muscle tissue development

structural constituent of muscle

unconventional myosin complex

muscle filament sliding

actin-dependent ATPase activity

Vascular smooth muscle contraction

218346_s_at -0.667 9.086 -2.766 1.426e-02 0.392 -2.947 SESN1 sestrin 1 6 -109414337 NM_014454 6q21 Hs.591336 6

nucleus

response to DNA damage stimulus

cell cycle arrest

negative regulation of cell proliferation

p53 signaling pathway

203478_at 0.173 11.672 2.766 1.426e-02 0.392 -2.948 NDUFC1 NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa 4 -140430540 NM_002494 4q28.2-q31.1 Hs.84549 8

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

transport

NADH dehydrogenase (ubiquinone) activity

membrane

integral to membrane

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

201604_s_at -0.347 6.274 -2.766 1.426e-02 0.392 -2.948 PPP1R12A protein phosphatase 1, regulatory (inhibitor) subunit 12A 12 -78691474, -78691474, -78691474 NM_002480 12q15-q21 Hs.49582 41

signal transducer activity

protein binding

cytoplasm

Vascular smooth muscle contraction

Focal adhesion

Long-term potentiation

Regulation of actin cytoskeleton

225836_s_at 0.427 3.744 2.766 1.426e-02 0.392 -2.948 C12orf32 chromosome 12 open reading frame 32 12 2856625 AL528840 12p13.33 Hs.198853 6    
233561_at 0.238 2.547 2.765 1.431e-02 0.392 -2.951 SH3TC2 SH3 domain and tetratricopeptide repeats 2 5 -148341905 AK023641 5q32 Hs.483784 15

binding

 
221486_at -0.448 9.846 -2.764 1.433e-02 0.392 -2.952 ENSA endosulfine alpha 1 -148866145, -148862377, -148862377, -148861222, -148861222 AF067170 1q21.3 Hs.632456 15

receptor binding

cytoplasm

transport

response to nutrient

ion channel inhibitor activity

 
227796_at -0.322 6.329 -2.764 1.433e-02 0.392 -2.952 ZFP62 zinc finger protein 62 homolog (mouse) 5 -180207218, -12668 AW157773 5q35.3 Hs.509227 Hs.719290 6

nucleic acid binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
204706_at 0.264 6.578 2.764 1.434e-02 0.392 -2.952 INPP5E inositol polyphosphate-5-phosphatase, 72 kDa 9 -138442892 NM_019892 9q34.3 Hs.120998 5

Golgi membrane

inositol or phosphatidylinositol phosphatase activity

phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity

inositol-polyphosphate 5-phosphatase activity

cellular_component

Golgi apparatus

lipid metabolic process

biological_process

membrane

hydrolase activity

Inositol phosphate metabolism

Metabolic pathways

Phosphatidylinositol signaling system

222538_s_at -0.642 8.000 -2.764 1.434e-02 0.392 -2.953 APPL1 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 3 57236804 AW467472 3p21.1-p14.3 Hs.476415 23

protein binding

nucleus

cytoplasm

endosome

microsome

cytosol

cell cycle

signal transduction

cell proliferation

insulin receptor signaling pathway

endosome membrane

vesicle membrane

membrane

NuRD complex

protein kinase B binding

regulation of glucose import

regulation of establishment of protein localization

Pathways in cancer

Colorectal cancer

228304_at 0.524 5.051 2.764 1.434e-02 0.392 -2.953 RBM43 RNA binding motif protein 43 2 -151812974 BE674118 2q23.3 Hs.302442 3

RNA binding

 
1557455_s_at -0.518 5.701 -2.763 1.435e-02 0.392 -2.953 MOSPD1 motile sperm domain containing 1 X -133849327 AF086333 Xq26.3 Hs.590789 4

structural molecule activity

membrane

integral to membrane

 
224573_at 0.272 10.494 2.763 1.435e-02 0.392 -2.953 RNASEK ribonuclease, RNase K 17 6856521 BE744389 17p13.1 Hs.632232 3

endoribonuclease activity

cellular_component

rRNA transcription

membrane

integral to membrane

hydrolase activity

 
223334_at 0.404 10.036 2.763 1.436e-02 0.392 -2.954 TMEM126A transmembrane protein 126A 11 85036692 AL136941 11q14.1 Hs.533725 8

molecular_function

mitochondrion

biological_process

membrane

integral to membrane

 
1552611_a_at 0.486 7.876 2.762 1.438e-02 0.393 -2.955 JAK1 Janus kinase 1 1 -65071493 AL555086 1p32.3-p31.3 Hs.207538 118

nucleotide binding

non-membrane spanning protein tyrosine kinase activity

Janus kinase activity

growth hormone receptor binding

protein binding

ATP binding

nucleus

cytoplasm

cytoskeleton

enzyme linked receptor protein signaling pathway

protein kinase cascade

membrane

transferase activity

peptidyl-tyrosine phosphorylation

cytokine-mediated signaling pathway

response to antibiotic

Jak-STAT signaling pathway

Pathways in cancer

Pancreatic cancer

227005_at 0.604 8.951 2.762 1.439e-02 0.393 -2.955 RPP14 ribonuclease P/MRP 14kDa subunit 3 58267011, 58267013 BF439230 3p14.3 Hs.446320 Hs.700016 14

RNA binding

ribonuclease P activity

ribonuclease activity

nucleus

tRNA processing

hydrolase activity

identical protein binding

 
220734_s_at -0.325 7.324 -2.762 1.440e-02 0.393 -2.956 GLTPD1 glycolipid transfer protein domain containing 1 1 1250005 NM_030575 1p36.33 Hs.515689 1

cytoplasm

glycolipid transporter activity

glycolipid transport

glycolipid binding

 
203525_s_at -0.517 7.366 -2.762 1.440e-02 0.393 -2.956 APC adenomatous polyposis coli 5 112071116, 112101454 AI375486 5q21-q22 Hs.158932 386

cytokinesis after mitosis

kinetochore

kidney development

hair follicle development

nucleus

cytoplasm

centrosome

cytosol

cytoplasmic microtubule

protein complex assembly

response to DNA damage stimulus

negative regulation of microtubule depolymerization

cell cycle arrest

mitotic metaphase/anaphase transition

mitotic cell cycle spindle assembly checkpoint

axonogenesis

beta-catenin binding

microtubule binding

axis specification

anterior/posterior pattern formation

dorsal/ventral pattern formation

proximal/distal pattern formation

lateral plasma membrane

protein kinase regulator activity

protein kinase binding

negative regulation of Wnt receptor signaling pathway

positive regulation of cell migration

growth cone

positive regulation of epithelial cell differentiation

beta-catenin destruction complex

positive regulation of microtubule polymerization

cell projection membrane

positive regulation of pseudopodium assembly

T cell differentiation in the thymus

axon part

Axin-APC-beta-catenin-GSK3B complex

somatic stem cell maintenance

negative regulation of odontogenesis

cell projection

positive regulation of apoptosis

negative regulation of apoptosis

negative regulation of MAPKKK cascade

skin development

regulation of osteoblast differentiation

regulation of osteoclast differentiation

positive regulation of protein catabolic process

negative regulation of cyclin-dependent protein kinase activity

positive regulation of cell adhesion

muscle maintenance

thymus development

negative regulation of epithelial cell proliferation

regulation of nitrogen compound metabolic process

chromosome organization

regulation of cell cycle

positive regulation of cell division

regulation of attachment of spindle microtubules to kinetochore

retina development in camera-type eye

Wnt receptor signaling pathway through beta-catenin

Wnt receptor signaling pathway through beta-catenin

Wnt signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Colorectal cancer

Endometrial cancer

Basal cell carcinoma

1555905_a_at -0.915 4.532 -2.760 1.444e-02 0.393 -2.959 C3orf23 chromosome 3 open reading frame 23 3 44354614, 44354947, 44354947 AI147556 3p21.31 Hs.55131 8

mitochondrion

 
234129_at -0.232 3.328 -2.760 1.445e-02 0.393 -2.959 ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 11 119713155 AL137456 11q23.3 Hs.24598 26

G-protein-coupled receptor binding

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

GTPase activator activity

protein binding

intracellular

cytoplasm

G-protein coupled receptor protein signaling pathway

intracellular signaling cascade

membrane

regulation of Rho protein signal transduction

Vascular smooth muscle contraction

Axon guidance

Regulation of actin cytoskeleton

202980_s_at -0.443 5.526 -2.759 1.446e-02 0.393 -2.960 SIAH1 seven in absentia homolog 1 (Drosophila) 16 -46951954, -46951946 AI953523 16q12 Hs.295923 64

ubiquitin-protein ligase activity

nucleus

cytoplasm

proteolysis

ubiquitin-dependent protein catabolic process

apoptosis

cell cycle

multicellular organismal development

spermatogenesis

nervous system development

axon guidance

protein C-terminus binding

zinc ion binding

anatomical structure morphogenesis

protein ubiquitination

ligase activity

cell differentiation

metal ion binding

p53 signaling pathway

Ubiquitin mediated proteolysis

Wnt signaling pathway

241405_at -0.413 5.644 -2.759 1.448e-02 0.394 -2.961 LOC400604 hypothetical gene supported by BC039664 17   AI085535 17q21.33 Hs.641441 1    
212228_s_at -0.342 10.592 -2.758 1.449e-02 0.394 -2.962 COQ9 coenzyme Q9 homolog (S. cerevisiae) 16 56038902 AC004382 16q21 Hs.513632 7

mitochondrion

ubiquinone biosynthetic process

 
200008_s_at -0.662 7.612 -2.758 1.450e-02 0.394 -2.962 GDI2 GDP dissociation inhibitor 2 10 -5847191 D13988 10p15 Hs.299055 16

Rab GDP-dissociation inhibitor activity

GTPase activator activity

cytoplasm

signal transduction

cell surface

protein transport

membrane

regulation of GTPase activity

 
204741_at 0.278 5.969 2.757 1.452e-02 0.394 -2.964 BICD1 bicaudal D homolog 1 (Drosophila) 12 32151451 NM_001714 12p11.2-p11.1 Hs.505202 17

structural constituent of cytoskeleton

protein binding

Golgi apparatus

cytoskeleton

RNA processing

transport

intracellular mRNA localization

anatomical structure morphogenesis

 
202518_at -0.327 7.330 -2.757 1.454e-02 0.395 -2.965 BCL7B B-cell CLL/lymphoma 7B 7 -72588621 NM_001707 7q11.23 Hs.647051 8

actin binding

cellular_component

biological_process

 
201361_at -0.257 7.562 -2.756 1.457e-02 0.395 -2.966 TMEM109 transmembrane protein 109 11 60437946 NM_024092 11q12.2 Hs.13662 5

molecular_function

cellular_component

nucleus

nucleolus

cytoplasm

biological_process

membrane

integral to membrane

sarcoplasmic reticulum

nuclear membrane

 
226905_at 0.474 7.645 2.756 1.457e-02 0.395 -2.967 FAM101B family with sequence similarity 101, member B 17 -289998 BG036514 17p13 Hs.345588 Hs.596411 Hs.719324 4    
239462_at 0.306 5.274 2.755 1.460e-02 0.395 -2.968 ZNF284 zinc finger protein 284 19 49268136 AI559740 19q13.31 Hs.279840 Hs.445395 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
216100_s_at -0.778 4.756 -2.755 1.460e-02 0.395 -2.968 TOR1AIP1 torsin A interacting protein 1 1 178118042 BG289527 1q24.2 Hs.496459 9

nucleus

membrane

integral to membrane

 
1555248_a_at -0.273 3.199 -2.754 1.462e-02 0.395 -2.969 WNK3 WNK lysine deficient protein kinase 3 X -54239579 AY082340 Xp11.23-p11.21 Hs.92423 12

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

protein kinase cascade

transferase activity

 
230612_at 0.277 4.758 2.754 1.463e-02 0.395 -2.970 WDR73 WD repeat domain 73 15 -82987014 AI264119 15q25.2 Hs.719288 3    
206544_x_at -0.561 7.914 -2.753 1.464e-02 0.395 -2.971 SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 9 2005341 NM_003070 9p22.3 Hs.298990 63

nucleotide binding

DNA binding

transcription coactivator activity

helicase activity

protein binding

ATP binding

nucleus

nucleoplasm

chromatin remodeling

regulation of transcription from RNA polymerase II promoter

DNA-dependent ATPase activity

positive regulation of specific transcription from RNA polymerase II promoter

negative regulation of specific transcription from RNA polymerase II promoter

SWI/SNF complex

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

 
219660_s_at 0.372 3.738 2.753 1.465e-02 0.395 -2.971 ATP8A2 ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 13 24844208 NM_016529 13q12 Hs.444957 4

nucleotide binding

magnesium ion binding

phospholipid-translocating ATPase activity

ATP binding

ATP biosynthetic process

negative regulation of cell proliferation

ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism

phospholipid transport

membrane

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

 
218625_at 0.442 6.380 2.753 1.466e-02 0.395 -2.972 NRN1 neuritin 1 6 -5943231 NM_016588 6p25.1 Hs.103291 7

plasma membrane

anchored to membrane

 
219596_at 0.432 6.128 2.753 1.466e-02 0.395 -2.972 THAP10 THAP domain containing 10 15 -68960734 NM_020147 15q23 Hs.591123 5

DNA binding

zinc ion binding

metal ion binding

 
1559688_at 0.452 3.281 2.753 1.466e-02 0.395 -2.972 LOC400581 GRB2-related adaptor protein-like 17 18971506 AK000842 17p11.2 Hs.661470 Hs.677674 1

protein binding

 
208667_s_at -0.421 10.144 -2.752 1.468e-02 0.395 -2.973 ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) 22 -39550546 U17714 22q13.2 Hs.712713 29

binding

cytoplasm

protein folding

protein binding, bridging

 
229287_at -0.333 7.423 -2.749 1.476e-02 0.397 -2.978 PCNX pecanex homolog (Drosophila) 14 70443874 BE326214 14q24.2 Hs.446559 10

membrane

integral to membrane

 
205231_s_at -0.434 8.783 -2.749 1.478e-02 0.397 -2.979 EPM2A epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) 6 -145988132 NM_005670 6q24 Hs.486696 37

protein serine/threonine phosphatase activity

protein serine/threonine phosphatase activity

protein tyrosine phosphatase activity

protein tyrosine phosphatase activity

protein binding

nucleus

cytoplasm

endoplasmic reticulum

cytosol

polysome

plasma membrane

carbohydrate metabolic process

glycogen metabolic process

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

carbohydrate binding

 
202303_x_at -0.403 5.846 -2.749 1.478e-02 0.397 -2.979 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 4 144654065 NM_003601 4q31.1-q31.2 Hs.558422 Hs.710623 37

nucleotide binding

condensed chromosome

DNA binding

RNA polymerase II transcription factor activity

helicase activity

ATP binding

nucleus

nucleoplasm

nucleolus

chromatin assembly or disassembly

nucleosome assembly

transcription initiation

regulation of transcription from RNA polymerase II promoter

embryonic development

transcription activator activity

nucleosome positioning

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

ATPase activity

RSF complex

nucleosome binding

histone binding

ATP-dependent chromatin remodeling

 
222605_at 0.334 8.633 2.749 1.478e-02 0.397 -2.979 RCOR3 REST corepressor 3 1 209499330, 209499330, 209499911 AI807073 1q32.2 Hs.356399 10

DNA binding

protein binding

nucleus

nucleolus

cytoplasm

regulation of transcription

 
221067_s_at -0.384 5.661 -2.748 1.480e-02 0.397 -2.980 C12orf39 chromosome 12 open reading frame 39 12 21570522 NM_030572 12p12.1 Hs.130692 8

extracellular region

nucleus

nucleolus

secretory granule

cytoplasmic vesicle

 
226519_s_at 0.425 6.955 2.747 1.482e-02 0.397 -2.981 AGXT2L2 alanine-glyoxylate aminotransferase 2-like 2 5 -177568146 AL561859 5q35.3 Hs.248746 4

mitochondrion

transaminase activity

transferase activity

pyridoxal phosphate binding

 
215748_at 0.269 4.439 2.747 1.483e-02 0.397 -2.982 KLHL35 kelch-like 35 (Drosophila) 11 -74811085 AL050370 11q13.4 Hs.292451 2    
225812_at 0.449 6.637 2.747 1.483e-02 0.397 -2.982 C6orf225 chromosome 6 open reading frame 225 6 112515366 N36759 6q21 Hs.591340 1    
213361_at 0.323 5.305 2.747 1.484e-02 0.397 -2.983 TDRD7 tudor domain containing 7 9 99214122 AW129593 9q22.33 Hs.193842 8

nucleic acid binding

cytoplasm

mitochondrial matrix

germ cell development

ribonucleoprotein complex

P granule

protein N-terminus binding

 
204727_at 0.281 2.148 2.746 1.485e-02 0.397 -2.983 WDHD1 WD repeat and HMG-box DNA binding protein 1 14 -54476691 AW772140 14q22.2 Hs.385998 8

DNA binding

nucleus

nucleoplasm

nucleolus

cytoplasm

 
203609_s_at -0.423 5.278 -2.746 1.487e-02 0.398 -2.985 ALDH5A1 aldehyde dehydrogenase 5 family, member A1 6 24603175 NM_001080 6p22.2-p22.3 Hs.371723 24

succinate-semialdehyde dehydrogenase activity

succinate-semialdehyde dehydrogenase activity

soluble fraction

mitochondrion

glucose metabolic process

acetate metabolic process

succinate metabolic process

glutamate metabolic process

glutamine metabolic process

glycerophospholipid metabolic process

galactosylceramide metabolic process

glutathione metabolic process

central nervous system development

gamma-aminobutyric acid catabolic process

gamma-aminobutyric acid catabolic process

oxidoreductase activity

respiratory electron transport chain

neurotransmitter catabolic process

protein homodimerization activity

short-chain fatty acid metabolic process

protein homotetramerization

oxidation reduction

Alanine, aspartate and glutamate metabolism

Butanoate metabolism

Metabolic pathways

214037_s_at -0.293 5.008 -2.744 1.491e-02 0.399 -2.987 CCDC22 coiled-coil domain containing 22 X 48978884 BF224247 Xp11.23 Hs.247700 Hs.26333 6

molecular_function

cellular_component

biological_process

 
214657_s_at -0.455 5.063 -2.743 1.494e-02 0.399 -2.989 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 11 64946844, 64946844 AU134977 11q13.1 Hs.523789 Hs.648467 6    
226823_at 0.237 8.078 2.743 1.495e-02 0.399 -2.989 PHACTR4 phosphatase and actin regulator 4 1 28568679, 28637247 AW450293 1p35.3 Hs.225641 7

actin binding

phosphoprotein phosphatase inhibitor activity

 
207616_s_at -0.454 8.047 -2.742 1.497e-02 0.399 -2.990 TANK TRAF family member-associated NFKB activator 2 161701711, 161701711 NM_004180 2q24-q31 Hs.132257 22

protein binding

cytoplasm

signal transduction

zinc ion binding

metal ion binding

RIG-I-like receptor signaling pathway

213890_x_at -0.353 12.550 -2.742 1.499e-02 0.399 -2.992 RPS16 ribosomal protein S16 19 -44615686 AI200589 19q13.1 Hs.397609 24

RNA binding

structural constituent of ribosome

protein binding

intracellular

cytosol

ribosome

rRNA processing

translational elongation

cytosolic small ribosomal subunit

cytosolic small ribosomal subunit

ribosomal small subunit biogenesis

Ribosome

227430_at -0.244 5.288 -2.742 1.499e-02 0.399 -2.992 ZC3H10 zinc finger CCCH-type containing 10 12 54798296 AI969773 12q13.2 Hs.632706 7

nucleic acid binding

zinc ion binding

metal ion binding

 
234952_s_at -0.297 6.162 -2.742 1.499e-02 0.399 -2.992 PHRF1 PHD and ring finger domains 1 11 566482 BC004950 11p15.5 Hs.325838 8

protein binding

zinc ion binding

metal ion binding

RNA polymerase binding

 
233893_s_at 0.353 6.677 2.741 1.500e-02 0.399 -2.992 KIAA1530 KIAA1530 4 1331103 AB040963 4p16.3 Hs.380475 3    
212967_x_at -0.333 9.824 -2.741 1.501e-02 0.399 -2.993 NAP1L1 nucleosome assembly protein 1-like 1 12 -74724938 AW148801 12q21.2 Hs.524599 Hs.695185 17

protein binding

nucleus

chromatin assembly complex

DNA replication

nucleosome assembly

positive regulation of cell proliferation

melanosome

 
208335_s_at 0.500 5.922 2.740 1.504e-02 0.400 -2.995 DARC Duffy blood group, chemokine receptor 1 157441133, 157441824 NM_002036 1q21-q22 Hs.153381 65

G-protein coupled receptor activity

chemokine receptor activity

plasma membrane

defense response

signal transduction

G-protein coupled receptor protein signaling pathway

integral to membrane

 
52255_s_at 0.284 6.219 2.739 1.506e-02 0.400 -2.996 COL5A3 collagen, type V, alpha 3 19 -9931236 AI984221 19p13.2 Hs.235368 12

extracellular matrix structural constituent

collagen binding

extracellular region

collagen

collagen type V

cell adhesion

cell-matrix adhesion

heparin binding

collagen fibril organization

skin development

Focal adhesion

ECM-receptor interaction

212184_s_at -0.496 7.951 -2.739 1.508e-02 0.400 -2.997 MAP3K7IP2 mitogen-activated protein kinase kinase kinase 7 interacting protein 2 6 149680755 AL117407 6q25.1-q25.3 Hs.269775 39

protein binding

intracellular

cytoplasm

cytosol

cytosol

zinc ion binding

membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of I-kappaB kinase/NF-kappaB cascade

metal ion binding

MAPK signaling pathway

Toll-like receptor signaling pathway

1552678_a_at -0.583 6.183 -2.739 1.508e-02 0.400 -2.997 USP28 ubiquitin specific peptidase 28 11 -113173806 NM_020886 11q23 Hs.503891 9

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
243610_at -1.881 5.491 -2.739 1.509e-02 0.400 -2.997 C9orf135 chromosome 9 open reading frame 135 9 71625550 AI768674 9q21.12 Hs.444459 3

membrane

integral to membrane

 
1559114_a_at 0.192 3.878 2.738 1.510e-02 0.400 -2.998 CXCR7 chemokine (C-X-C motif) receptor 7 2 237143118 BC038720 2q37.3 Hs.471751 21

receptor activity

G-protein coupled receptor activity

protein binding

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

biological_process

integral to membrane

interspecies interaction between organisms

 
203581_at -0.309 8.186 -2.738 1.510e-02 0.400 -2.998 RAB4A RAB4A, member RAS oncogene family 1 227473501 BC002438 1q42-q43 Hs.296169 43

nucleotide binding

GTPase activity

GTP binding

cytoplasm

small GTPase mediated signal transduction

protein transport

membrane

Endocytosis

204566_at -0.408 5.770 -2.738 1.511e-02 0.400 -2.999 PPM1D protein phosphatase 1D magnesium-dependent, delta isoform 17 56032335 NM_003620 17q23.2 Hs.591184 37

magnesium ion binding

protein serine/threonine phosphatase activity

protein binding

nucleus

protein amino acid dephosphorylation

cell cycle

negative regulation of cell proliferation

protein serine/threonine phosphatase complex

response to radiation

hydrolase activity

manganese ion binding

p53 signaling pathway

217987_at -0.405 8.972 -2.737 1.513e-02 0.400 -3.000 ASNSD1 asparagine synthetase domain containing 1 2 190234369 NM_019048 2p24.3-q21.3 Hs.101364 3

asparagine synthase (glutamine-hydrolyzing) activity

asparagine biosynthetic process

glutamine metabolic process

cellular amino acid biosynthetic process

 
228845_at 0.214 6.076 2.737 1.514e-02 0.400 -3.000 PLBD2 phospholipase B domain containing 2 12 112280753 AW451356 12q24.13 Hs.115896 4

lipid catabolic process

hydrolase activity

lysosomal lumen

 
218883_s_at 0.481 3.896 2.737 1.514e-02 0.400 -3.001 MLF1IP MLF1 interacting protein 4 -185852213 NM_024629 4q35.1 Hs.575032 16

condensed chromosome kinetochore

protein binding

nucleus

chromosome

cytoplasm

interspecies interaction between organisms

regulation of transcription

 
218631_at 0.300 5.876 2.737 1.515e-02 0.400 -3.001 AVPI1 arginine vasopressin-induced 1 10 -99427170 NM_021732 10q24.2 Hs.23918 9

cell cycle

 
213939_s_at 0.473 7.138 2.735 1.518e-02 0.400 -3.003 RUFY3 RUN and FYVE domain containing 3 4 71789517, 71806559, 71806559 AI871641 4q13.3 Hs.713172 8

multicellular organismal development

nervous system development

cell differentiation

filopodium

growth cone

negative regulation of axonogenesis

 
1554487_a_at 0.431 4.400 2.734 1.522e-02 0.401 -3.005 ATF6B activating transcription factor 6 beta 6 -32191022, -3490215 BC008394 6p21.3 Hs.42853 15

transcription factor activity

intracellular

nucleus

endoplasmic reticulum

regulation of transcription, DNA-dependent

response to unfolded protein

signal transduction

membrane

integral to membrane

sequence-specific DNA binding

protein dimerization activity

 
242287_at -0.523 6.343 -2.734 1.522e-02 0.401 -3.005 CLIP1 CAP-GLY domain containing linker protein 1 12 -121321933 AI090487 12q24.3 Hs.524809 37

kinetochore

nucleic acid binding

protein binding

cytoplasm

endosome

microtubule

intermediate filament

mitosis

microtubule binding

zinc ion binding

protein homodimerization activity

metal ion binding

 
204151_x_at 1.088 9.982 2.733 1.525e-02 0.402 -3.007 AKR1C1 aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase) 10 4995453 NM_001353 10p15-p14 Hs.460260 37

aldo-keto reductase activity

cytoplasm

cytosol

xenobiotic metabolic process

digestion

bile acid metabolic process

bile acid and bile salt transport

oxidoreductase activity

intestinal cholesterol absorption

carboxylic acid binding

bile acid binding

cholesterol homeostasis

response to organophosphorus

20-alpha-hydroxysteroid dehydrogenase activity

3-alpha-hydroxysteroid dehydrogenase (B-specific) activity

trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity

indanol dehydrogenase activity

protein homooligomerization

oxidation reduction

Metabolism of xenobiotics by cytochrome P450

214846_s_at -0.561 7.757 -2.733 1.526e-02 0.402 -3.008 ALPK3 alpha-kinase 3 15 83160914 AB037751 15q25.2 Hs.459183 5

protein serine/threonine kinase activity

ATP binding

nucleus

protein amino acid phosphorylation

multicellular organismal development

heart development

kinase activity

transferase activity

 
206121_at -0.798 10.853 -2.732 1.528e-02 0.402 -3.009 AMPD1 adenosine monophosphate deaminase 1 (isoform M) 1 -115017244 NM_000036 1p13 Hs.89570 59

AMP deaminase activity

purine base metabolic process

nucleotide metabolic process

purine ribonucleoside monophosphate biosynthetic process

hydrolase activity

Purine metabolism

Biosynthesis of plant hormones

Metabolic pathways

226060_at -0.305 4.822 -2.732 1.529e-02 0.402 -3.009 RFT1 RFT1 homolog (S. cerevisiae) 3 -53097542 BF475369 3p21.1 Hs.631910 3

lipid transporter activity

lipid transport

carbohydrate transport

membrane

integral to membrane

N-Glycan biosynthesis

203978_at -0.260 7.047 -2.732 1.529e-02 0.402 -3.009 NUBP1 nucleotide binding protein 1 (MinD homolog, E. coli) 16 10745198 NM_002484 16p13.13 Hs.81469 9

nucleotide binding

protein binding

ATP binding

cytosol

cellular iron ion homeostasis

cell growth

iron-sulfur cluster assembly

nucleoside-triphosphatase activity

iron-sulfur cluster binding

 
222717_at 0.468 6.895 2.732 1.530e-02 0.402 -3.010 SDPR serum deprivation response (phosphatidylserine binding protein) 2 -192407280 BF982174 2q32-q33 Hs.26530 12

phosphatidylserine binding

protein binding

cytoplasm

cytosol

caveola

membrane

 
219757_s_at 0.361 4.706 2.731 1.531e-02 0.402 -3.011 C14orf101 chromosome 14 open reading frame 101 14 56116263 NM_017799 14q22.3 Hs.497253 3

membrane

integral to membrane

 
208554_at -0.216 3.061 -2.730 1.533e-02 0.402 -3.012 POU4F3 POU class 4 homeobox 3 5 145698779 NM_002700 5q31 Hs.553499 12

transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

visual perception

sensory perception of sound

vestibulocochlear nerve development

retinal ganglion cell axon guidance

inner ear morphogenesis

auditory receptor cell differentiation

sequence-specific DNA binding

axon extension involved in development

neuromuscular process controlling balance

neuron apoptosis

 
209487_at 0.314 6.152 2.730 1.534e-02 0.402 -3.012 RBPMS RNA binding protein with multiple splicing 8 30361485, 30361485 D84109 8p12-p11 Hs.334587 8

nucleotide binding

RNA binding

protein binding

RNA processing

 
1558327_at 0.303 5.315 2.730 1.535e-02 0.402 -3.013 ZDHHC18 zinc finger, DHHC-type containing 18 1 27025787 AW408061 1p36.11 Hs.523710 4

zinc ion binding

acyltransferase activity

membrane

integral to membrane

transferase activity

metal ion binding

 
215242_at -0.330 4.111 -2.729 1.537e-02 0.402 -3.014 PIGC phosphatidylinositol glycan anchor biosynthesis, class C 1 -170677219 AL035301 1q23-q25 Hs.188456 12

endoplasmic reticulum

endoplasmic reticulum membrane

membrane

integral to membrane

preassembly of GPI anchor in ER membrane

transferase activity, transferring glycosyl groups

phosphatidylinositol N-acetylglucosaminyltransferase activity

Glycosylphosphatidylinositol(GPI)-anchor biosynthesis

Metabolic pathways

209577_at 0.214 6.605 2.729 1.537e-02 0.402 -3.014 PCYT2 phosphate cytidylyltransferase 2, ethanolamine 17 -77455383, -2421678 BC000351 17q25.3 Hs.645248 8

ethanolamine-phosphate cytidylyltransferase activity

cellular_component

phospholipid biosynthetic process

biosynthetic process

transferase activity

nucleotidyltransferase activity

Aminophosphonate metabolism

Glycerophospholipid metabolism

Metabolic pathways

228452_at -0.456 6.951 -2.729 1.538e-02 0.402 -3.015 C17orf39 chromosome 17 open reading frame 39 17 17883335 AA827865 17p11.2 Hs.187422 5    
225557_at -0.873 5.848 -2.729 1.539e-02 0.402 -3.015 CSRNP1 cysteine-serine-rich nuclear protein 1 3 -39158347 AI091372 3p22 Hs.370950 4

molecular_function

transcription factor activity

cellular_component

nucleus

apoptosis

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

 
1569368_at 0.281 4.748 2.728 1.540e-02 0.402 -3.016 LOC283693 actin, gamma pseudogene 15   BC014481 15q25.2 Hs.560399 1    
209554_at 0.292 5.067 2.728 1.540e-02 0.402 -3.016 CD36 CD36 molecule (thrombospondin receptor) 7 80069439, 80105767, 80105767, 80113580, 80113697 BE968792 7q11.2 Hs.120949 173

positive regulation of cell-matrix adhesion

low-density lipoprotein receptor activity

membrane fraction

Golgi apparatus

plasma membrane

integral to plasma membrane

lipid metabolic process

transport

cell adhesion

nitric oxide mediated signal transduction

blood coagulation

high-density lipoprotein binding

lipid binding

cell surface

cell surface

positive regulation of foam cell differentiation

plasma membrane long-chain fatty acid transport

lipid storage

cGMP-mediated signaling

cholesterol transport

platelet alpha granule membrane

lipoprotein particle clearance

lipoprotein catabolic process

lipoprotein transport

apoptotic cell clearance

transforming growth factor beta binding

thrombospondin receptor activity

PPAR signaling pathway

ECM-receptor interaction

Hematopoietic cell lineage

Adipocytokine signaling pathway

236841_at 0.517 5.562 2.727 1.543e-02 0.402 -3.017 WASH3P WAS protein family homolog 3 pseudogene 15 100318538 BE464132 15q26.3 Hs.459573 Hs.585931 6    
202501_at -0.504 7.499 -2.727 1.545e-02 0.402 -3.019 MAPRE2 microtubule-associated protein, RP/EB family, member 2 18 30810889, 30812205, 30875321 NM_014268 18q12.1-q12.2 Hs.532824 27

cytoplasm

microtubule

cell cycle

mitosis

signal transduction

microtubule binding

cell proliferation

cell division

 
225770_at 0.258 7.067 2.727 1.545e-02 0.402 -3.019 RSPRY1 ring finger and SPRY domain containing 1 16 55777741 AI206557 16q13 Hs.460885 5

protein binding

extracellular region

zinc ion binding

metal ion binding

 
232349_x_at -0.453 9.489 -2.726 1.546e-02 0.402 -3.019 DCAF6 DDB1 and CUL4 associated factor 6 1 166172531 BF671187 1q24.2 Hs.435741 10

nucleus

ligand-dependent nuclear receptor transcription coactivator activity

 
241383_at 0.318 4.344 2.726 1.547e-02 0.402 -3.019 ZNF385C zinc finger protein 385C 17   H05959 17q21.2 Hs.443140 2

nucleic acid binding

intracellular

nucleus

zinc ion binding

metal ion binding

 
224605_at -0.435 8.095 -2.726 1.547e-02 0.402 -3.019 C4orf3 chromosome 4 open reading frame 3 4 -120437021 AV727336 4q26 Hs.701808 Hs.718451 5

membrane

integral to membrane

 
224364_s_at 0.801 7.632 2.725 1.550e-02 0.403 -3.021 PPIL3 peptidylprolyl isomerase (cyclophilin)-like 3 2 -201443924, -201443923, -201443923 AF251049 2q33.1 Hs.121076 11

peptidyl-prolyl cis-trans isomerase activity

protein binding

spliceosomal complex

mRNA processing

protein folding

RNA splicing

isomerase activity

 
238231_at 0.465 4.503 2.724 1.553e-02 0.403 -3.023 NFYC nuclear transcription factor Y, gamma 1 40929828, 40930266 AV700263 1p32 Hs.233458 Hs.713051 24

transcription factor activity

RNA polymerase II transcription factor activity

transcription coactivator activity

protein binding

intracellular

nucleus

regulation of transcription from RNA polymerase II promoter

protein folding

CCAAT-binding factor complex

sequence-specific DNA binding

Antigen processing and presentation

1563874_at -0.277 4.068 -2.724 1.553e-02 0.403 -3.023 WDR72 WD repeat domain 72 15 -51593229 AK096055 15q21.3 Hs.122125 4    
223039_at -0.373 9.036 -2.723 1.556e-02 0.403 -3.025 C22orf13 chromosome 22 open reading frame 13 22 -23266407 BC004144 22q11.2 Hs.9850 3    
204221_x_at 0.277 3.961 2.723 1.556e-02 0.403 -3.025 GLIPR1 GLI pathogenesis-related 1 12 74160779 U16307 12q21.2 Hs.205558 13

extracellular region

membrane

integral to membrane

 
201928_at 0.216 6.967 2.722 1.559e-02 0.403 -3.027 PKP4 plakophilin 4 2 159021721 AA194254 2q23-q31 Hs.407580 27

protein binding

cell adhesion

desmosome

 
220819_at 0.180 5.801 2.722 1.560e-02 0.403 -3.027 FRMD1 FERM domain containing 1 6 -168199312, -168199312 NM_024919 6q27 Hs.266746 2

binding

cytoskeleton

 
211578_s_at -0.328 4.928 -2.722 1.560e-02 0.403 -3.027 RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 17 55325224 M60725 17q23.1 Hs.463642 123

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

cytosol

protein amino acid phosphorylation

signal transduction

transferase activity

synaptosome

cell junction

synapse

ErbB signaling pathway

mTOR signaling pathway

TGF-beta signaling pathway

Fc gamma R-mediated phagocytosis

Insulin signaling pathway

Acute myeloid leukemia

230000_at -0.353 4.654 -2.722 1.560e-02 0.403 -3.027 RNF213 ring finger protein 213 17 75928320 AI523817 17q25.3 Hs.195642 Hs.657519 6

nucleotide binding

protein binding

zinc ion binding

nucleoside-triphosphatase activity

metal ion binding

 
236320_at 0.265 3.883 2.720 1.566e-02 0.403 -3.030 CCDC17 coiled-coil domain containing 17 1 -45858302 AA010540 1p34.1 Hs.18912 3    
235475_at 0.386 6.018 2.720 1.566e-02 0.403 -3.030 SERP1 stress-associated endoplasmic reticulum protein 1 3 -151742469 AI580135 3q25.1 Hs.518326 Hs.709270 10

skeletal system development

endoplasmic reticulum

ribosome

glucose metabolic process

protein amino acid glycosylation

response to stress

plasma membrane organization

post-embryonic development

multicellular organismal aging

protein transport

membrane

integral to membrane

endoplasmic reticulum unfolded protein response

positive regulation of insulin secretion

positive regulation of translation

positive regulation of organ growth

muscle organ morphogenesis

positive regulation of growth hormone secretion

intracellular protein transmembrane transport

 
205348_s_at 0.464 5.722 2.720 1.566e-02 0.403 -3.030 DYNC1I1 dynein, cytoplasmic 1, intermediate chain 1 7 95239753 NM_004411 7q21.3-q22.1 Hs.440364 17

microtubule motor activity

protein binding

cytoplasmic dynein complex

microtubule

microtubule binding

vesicle transport along microtubule

perinuclear region of cytoplasm

 
212155_at 0.615 8.699 2.720 1.566e-02 0.403 -3.030 RNF187 ring finger protein 187 1 226741716 AA085748 1q42.13 Hs.356377 Hs.679030 3    
205395_s_at -0.292 5.026 -2.720 1.566e-02 0.403 -3.031 MRE11A MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 11 -93790114 NM_005590 11q21 Hs.192649 107

single-stranded DNA specific endodeoxyribonuclease activity

regulation of mitotic recombination

DNA binding

double-stranded DNA binding

nucleus

nucleoplasm

nucleolus

double-strand break repair via nonhomologous end joining

response to DNA damage stimulus

telomere maintenance via telomerase

meiosis

reciprocal meiotic recombination

protein C-terminus binding

3'-5' exonuclease activity

hydrolase activity

manganese ion binding

Homologous recombination

Non-homologous end-joining

1557523_at 0.352 3.764 2.720 1.567e-02 0.403 -3.031 ATP6AP1L ATPase, H+ transporting, lysosomal accessory protein 1-like 5 81636921 AW269750 5q14.2 Hs.364045 2

ATP synthesis coupled proton transport

membrane

integral to membrane

proton-transporting V-type ATPase, V1 domain

hydrogen ion transporting ATP synthase activity, rotational mechanism

proton-transporting ATPase activity, rotational mechanism

 
207397_s_at 0.230 3.123 2.719 1.569e-02 0.403 -3.032 HOXD13 homeobox D13 2 176665777 NM_000523 2q31.1 Hs.152414 37

skeletal system development

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

multicellular organismal development

sequence-specific DNA binding

 
208617_s_at -0.537 10.462 -2.719 1.570e-02 0.403 -3.033 PTP4A2 protein tyrosine phosphatase type IVA, member 2 1 -32146379 AF208850 1p35 Hs.470477 Hs.712749 Hs.713025 21

prenylated protein tyrosine phosphatase activity

protein binding

cytoplasm

early endosome

plasma membrane

protein amino acid dephosphorylation

hydrolase activity

 
220992_s_at -0.473 7.704 -2.718 1.571e-02 0.403 -3.033 C1orf25 chromosome 1 open reading frame 25 1 -183353840 NM_030934 1q25.2 Hs.107149 6

RNA binding

tRNA (guanine-N2-)-methyltransferase activity

intracellular

behavior

tRNA processing

zinc ion binding

metal ion binding

 
228693_at 0.453 6.246 2.718 1.573e-02 0.403 -3.034 CCDC50 coiled-coil domain containing 50 3 192529567 AI681307 3q28 Hs.478682 12

protein binding

cytoplasm

 
1557918_s_at -0.250 5.117 -2.718 1.573e-02 0.403 -3.034 SLC16A1 solute carrier family 16, member 1 (monocarboxylic acid transporter 1) 1 -113255992 AU131482 1p12 Hs.75231 43

protein binding

membrane fraction

plasma membrane

transport

mevalonate transmembrane transporter activity

symporter activity

secondary active monocarboxylate transmembrane transporter activity

organic anion transport

mevalonate transport

integral to membrane

 
220920_at -0.336 5.211 -2.718 1.573e-02 0.403 -3.035 ATP10B ATPase, class V, type 10B 5 -159922704 NM_025153 5q34 Hs.109358 5

nucleotide binding

magnesium ion binding

phospholipid-translocating ATPase activity

ATP binding

ATP biosynthetic process

ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism

phospholipid transport

membrane

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

 
225333_at 0.255 4.335 2.717 1.574e-02 0.403 -3.035 ZNF496 zinc finger protein 496 1 -245530244 AI218383 1q44 Hs.654803 5

transcription factor activity

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
201594_s_at 0.223 7.518 2.717 1.574e-02 0.403 -3.035 PPP4R1 protein phosphatase 4, regulatory subunit 1 18 -9536791 NM_005134 18p11.22 Hs.719096 11

protein binding

soluble fraction

signal transduction

protein phosphatase type 4 regulator activity

 
209480_at 0.999 4.013 2.717 1.574e-02 0.403 -3.035 HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 6 -32735634 M16276 6p21.3 Hs.409934 Hs.534322 Hs.713773 998

antigen processing and presentation of peptide or polysaccharide antigen via MHC class II

plasma membrane

immune response

immune response

membrane

membrane

integral to membrane

MHC class II receptor activity

MHC class II protein complex

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

210957_s_at -0.298 3.676 -2.717 1.575e-02 0.403 -3.035 AFF2 AF4/FMR2 family, member 2 X 147389830 L76569 Xq28 Hs.496911 21

protein binding

brain development

 
242956_at 0.264 3.682 2.717 1.575e-02 0.403 -3.036 IDH1 isocitrate dehydrogenase 1 (NADP+), soluble 2 -208809197 AA564352 2q33.3 Hs.593422 Hs.714620 33

magnesium ion binding

isocitrate dehydrogenase (NADP+) activity

cytoplasm

peroxisome

cytosol

carbohydrate metabolic process

glyoxylate cycle

tricarboxylic acid cycle

isocitrate metabolic process

glutathione metabolic process

response to oxidative stress

oxidoreductase activity

oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

manganese ion binding

NAD or NADH binding

oxidation reduction

Citrate cycle (TCA cycle)

Glutathione metabolism

Reductive carboxylate cycle (CO2 fixation)

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

200686_s_at 0.332 9.568 2.716 1.577e-02 0.403 -3.037 SFRS11 splicing factor, arginine/serine-rich 11 1 70443952 NM_004768 1p31 Hs.479693 13

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

nucleolus

RNA splicing

 
230122_at 0.317 3.275 2.716 1.578e-02 0.403 -3.037 MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 10 21863107, 21863579 BE219716 10p12 Hs.30385 19

transcription factor activity

protein binding

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
204248_at -0.296 8.246 -2.716 1.578e-02 0.403 -3.037 GNA11 guanine nucleotide binding protein (G protein), alpha 11 (Gq class) 19 3045407 NM_002067 19p13.3 Hs.650575 Hs.654784 44

nucleotide binding

skeletal system development

regulation of action potential

GTPase activity

signal transducer activity

GTP binding

cytoplasm

plasma membrane

protein amino acid ADP-ribosylation

signal transduction

G-protein coupled receptor protein signaling pathway

heart development

guanyl nucleotide binding

regulation of melanocyte differentiation

pigmentation during development

activation of phospholipase C activity by dopamine receptor signaling pathway

Calcium signaling pathway

Vascular smooth muscle contraction

Gap junction

Long-term depression

GnRH signaling pathway

216239_at 0.233 2.933 2.716 1.578e-02 0.403 -3.037 BBS9 Bardet-Biedl syndrome 9 7 33135676 U87408 7p14 Hs.372360 9

molecular_function

cytoplasm

centrosome

plasma membrane

cilium

visual perception

BBSome

fat cell differentiation

response to stimulus

cilium membrane

 
203543_s_at -0.815 7.801 -2.716 1.579e-02 0.403 -3.038 KLF9 Kruppel-like factor 9 9 -72189332 NM_001206 9q13 Hs.150557 Hs.602267 19

transcription factor activity

intracellular

nucleus

regulation of transcription from RNA polymerase II promoter

embryo implantation

zinc ion binding

regulation of transcription

metal ion binding

progesterone receptor signaling pathway

 
202734_at -0.354 7.090 -2.715 1.581e-02 0.403 -3.039 TRIP10 thyroid hormone receptor interactor 10 19 6690706 NM_004240 19p13.3 Hs.515094 28

cytoplasm

lysosome

Golgi apparatus

cytoskeleton

plasma membrane

cell cortex

endocytosis

signal transduction

lipid binding

actin cytoskeleton organization

identical protein binding

perinuclear region of cytoplasm

Insulin signaling pathway

213638_at 0.214 2.696 2.715 1.582e-02 0.403 -3.040 PHACTR1 phosphatase and actin regulator 1 6 12825818 AW054711 6p24.1 Hs.436996 8

actin binding

phosphoprotein phosphatase inhibitor activity

cytoplasm

cell junction

synapse

 
202379_s_at 0.344 7.803 2.715 1.583e-02 0.404 -3.040 NKTR natural killer-tumor recognition sequence 3 42617150 AI361805 3p23-p21 Hs.529509 9

peptidyl-prolyl cis-trans isomerase activity

protein folding

cyclosporin A binding

membrane

isomerase activity

 
206453_s_at -0.437 11.058 -2.714 1.585e-02 0.404 -3.041 NDRG2 NDRG family member 2 14 -20554761, -20554761 NM_016250 14q11.2 Hs.525205 42

molecular_function

nucleus

cytoplasm

Golgi apparatus

centrosome

cytosol

multicellular organismal development

nervous system development

cell differentiation

perinuclear region of cytoplasm

 
201464_x_at -0.416 9.248 -2.714 1.585e-02 0.404 -3.041 JUN jun oncogene 1 -59019050 BG491844 1p32-p31 Hs.714791 443

nuclear chromosome

transcription factor activity

RNA polymerase II transcription factor activity

Rho GTPase activator activity

nucleus

transcription factor complex

cytosol

regulation of transcription, DNA-dependent

transforming growth factor beta receptor signaling pathway

SMAD protein nuclear translocation

transcription factor binding

negative regulation of cell proliferation

cellular process

promoter binding

negative regulation of protein amino acid autophosphorylation

leading edge cell differentiation

response to drug

positive regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

protein dimerization activity

regulation of cell cycle

SMAD protein signal transduction

R-SMAD binding

MAPK signaling pathway

ErbB signaling pathway

Wnt signaling pathway

Focal adhesion

Toll-like receptor signaling pathway

T cell receptor signaling pathway

B cell receptor signaling pathway

Neurotrophin signaling pathway

GnRH signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

1561923_a_at -0.247 3.630 -2.712 1.590e-02 0.405 -3.044 SF3B14 splicing factor 3B, 14 kDa subunit 2 -24143957 AF147425 2pter-p25.1 Hs.177861 14

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

RNA splicing

 
238653_at 0.301 6.641 2.712 1.590e-02 0.405 -3.044 LRIG2 leucine-rich repeats and immunoglobulin-like domains 2 1 113417353 BF967997 1p13.1 Hs.448972 Hs.696605 7

protein binding

cytoplasm

plasma membrane

integral to membrane

 
242114_at -0.406 5.000 -2.712 1.591e-02 0.405 -3.044 BOLA2 bolA homolog 2 (E. coli) 16 -30111756, -29372414 BF088991 16p11.2 Hs.444600 Hs.655267 5    
204927_at 0.173 6.532 2.711 1.594e-02 0.405 -3.046 RASSF7 Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 11 550970, 551449 NM_003475 11p15.5 Hs.72925 9

DNA binding

protein binding

nucleus

regulation of transcription, DNA-dependent

signal transduction

 
222436_s_at -0.225 8.492 -2.711 1.594e-02 0.405 -3.046 VPS24 vacuolar protein sorting 24 homolog (S. cerevisiae) 2 -86584063 AF219226 2p24.3-p24.1 Hs.591582 25

protein binding

cytoplasm

endosome

cytosol

cell cycle

protein transport

membrane

late endosome membrane

cell division

Endocytosis

204344_s_at -0.544 6.373 -2.711 1.595e-02 0.405 -3.047 SEC23A Sec23 homolog A (S. cerevisiae) 14 -38570873 NM_006364 14q21.1 Hs.272927 18

Golgi membrane

protein binding

endoplasmic reticulum

Golgi apparatus

cytosol

intracellular protein transport

ER to Golgi vesicle-mediated transport

ER to Golgi vesicle-mediated transport

zinc ion binding

membrane

membrane organization

vesicle-mediated transport

COPII vesicle coat

perinuclear region of cytoplasm

 
203091_at -0.210 6.796 -2.710 1.598e-02 0.405 -3.048 FUBP1 far upstream element (FUSE) binding protein 1 1 -78186178 NM_003902 1p31.1 Hs.567380 28

single-stranded DNA binding

transcription factor activity

RNA binding

protein binding

nucleus

nucleolus

transcription from RNA polymerase II promoter

regulation of transcription

 
218401_s_at -0.501 6.409 -2.710 1.599e-02 0.405 -3.049 ZNF281 zinc finger protein 281 1 -198642042 NM_012482 1q32.1 Hs.59757 5

negative regulation of transcription from RNA polymerase II promoter

DNA binding

specific RNA polymerase II transcription factor activity

intracellular

nucleus

DNA-directed RNA polymerase II, core complex

zinc ion binding

regulation of transcription

metal ion binding

 
202354_s_at 0.236 5.134 2.709 1.601e-02 0.405 -3.050 GTF2F1 general transcription factor IIF, polypeptide 1, 74kDa 19 -6330579 AW190445 19p13.3 Hs.68257 79

nuclear mRNA splicing, via spliceosome

DNA binding

transcription coactivator activity

catalytic activity

nucleus

nucleoplasm

transcription factor TFIIF complex

transcription initiation from RNA polymerase II promoter

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

transcription factor binding

general RNA polymerase II transcription factor activity

positive regulation of transcription

Basal transcription factors

202418_at 0.316 8.675 2.709 1.601e-02 0.405 -3.050 YIF1A Yip1 interacting factor homolog A (S. cerevisiae) 11 -65808626 NM_020470 11q13 Hs.446445 13

cytoplasm

endoplasmic reticulum

ER-Golgi intermediate compartment

Golgi apparatus

protein transport

membrane

integral to membrane

vesicle-mediated transport

 
1553755_at 0.224 6.570 2.709 1.603e-02 0.405 -3.051 NXNL1 nucleoredoxin-like 1 19 -17427233 NM_138454 19p13.11 Hs.661836 6

nucleus

nuclear outer membrane

mitochondrion

membrane

cell redox homeostasis

 
221555_x_at 0.333 6.241 2.708 1.604e-02 0.406 -3.052 CDC14B CDC14 cell division cycle 14 homolog B (S. cerevisiae) 9 -98302215, -98302215 AU145941 9q22.32-q22.33 Hs.40582 17

protein serine/threonine phosphatase activity

protein tyrosine phosphatase activity

protein binding

nucleus

nucleolus

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

Cell cycle

1553351_at 0.314 3.749 2.707 1.607e-02 0.406 -3.054 OTUD7A OTU domain containing 7A 15 -29562620 NM_130901 15q13.3 Hs.355236 2

DNA binding

nucleus

cytoplasm

peptidase activity

cysteine-type peptidase activity

zinc ion binding

modification-dependent protein catabolic process

metal ion binding

 
226310_at -0.461 5.876 -2.707 1.608e-02 0.406 -3.054 RICTOR RPTOR independent companion of MTOR, complex 2 5 -38973779 AI743511 5p13.1 Hs.407926 21

guanyl-nucleotide exchange factor activity

protein binding

intracellular

embryonic development

positive regulation of actin filament polymerization

actin cytoskeleton reorganization

TORC2 complex

positive regulation of TOR signaling pathway

regulation of Rac GTPase activity

regulation of actin cytoskeleton organization

positive regulation of peptidyl-tyrosine phosphorylation

regulation of small GTPase mediated signal transduction

regulation of protein kinase B signaling cascade

mTOR signaling pathway

225904_at -0.442 5.579 -2.706 1.610e-02 0.406 -3.055 C1orf96 chromosome 1 open reading frame 96 1 -227523374 N64686 1q42.13 Hs.715507 2    
232119_at -0.584 7.352 -2.705 1.614e-02 0.407 -3.057 SYNPO2 synaptopodin 2 4 120029443, 120029443 BF984227 4q26 Hs.655519 14

actin binding

protein binding

nucleus

cytoplasm

 
219448_at -1.212 7.532 -2.704 1.616e-02 0.407 -3.058 TMEM70 transmembrane protein 70 8 75050983 BC002748 8q21.11 Hs.106650 7

molecular_function

mitochondrion

membrane

integral to membrane

integral to mitochondrial membrane

mitochondrial proton-transporting ATP synthase complex assembly

 
219236_at 0.298 5.607 2.704 1.617e-02 0.408 -3.059 PAQR6 progestin and adipoQ receptor family member VI 1 -154479833, -154479830 NM_024897 1q22 Hs.235873 5

receptor activity

membrane

integral to membrane

 
204795_at 0.275 5.049 2.703 1.620e-02 0.408 -3.061 PRR3 proline rich 3 6 30632734, 1973311, 1771606 NM_025263 6p21.33 Hs.118354 Hs.651434 Hs.83147 4

nucleic acid binding

zinc ion binding

metal ion binding

 
204560_at -0.576 4.975 -2.703 1.620e-02 0.408 -3.061 FKBP5 FK506 binding protein 5 6 -35656311, -35649339, -35649339, -35649339 NM_004117 6p21.3-p21.2 Hs.407190 50

peptidyl-prolyl cis-trans isomerase activity

FK506 binding

nucleus

cytoplasm

protein folding

isomerase activity

heat shock protein binding

 
228570_at 0.391 4.354 2.703 1.621e-02 0.408 -3.061 BTBD11 BTB (POZ) domain containing 11 12 106236326, 106498763 BF510581 12q23.3 Hs.271272 2

DNA binding

protein binding

membrane

integral to membrane

 
223700_at -0.233 2.708 -2.703 1.621e-02 0.408 -3.061 MND1 meiotic nuclear divisions 1 homolog (S. cerevisiae) 4 154485250 AY028916 4q31.3 Hs.294088 4

DNA binding

protein binding

nucleus

DNA recombination

meiosis

 
32128_at 0.303 3.617 2.703 1.622e-02 0.408 -3.061 CCL18 chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated) 17 31415755 Y13710 17q11.2 Hs.143961 35

extracellular region

extracellular space

chemotaxis

inflammatory response

immune response

signal transduction

cell-cell signaling

chemokine activity

response to biotic stimulus

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

202381_at -0.345 7.704 -2.702 1.625e-02 0.408 -3.063 ADAM9 ADAM metallopeptidase domain 9 (meltrin gamma) 8 38973661, 38973661 NM_003816 8p11.22 Hs.591852 36

activation of MAPKK activity

metalloendopeptidase activity

protein kinase C binding

integrin binding

integrin binding

integrin binding

collagen binding

extracellular region

extracellular space

cytoplasm

plasma membrane

proteolysis

response to oxidative stress

cell-matrix adhesion

transforming growth factor beta receptor signaling pathway

integrin-mediated signaling pathway

peptidase activity

zinc ion binding

cell surface

response to manganese ion

integral to membrane

SH3 domain binding

SH3 domain binding

keratinocyte differentiation

intrinsic to external side of plasma membrane

positive regulation of cell adhesion mediated by integrin

cell-cell adhesion mediated by integrin

positive regulation of macrophage fusion

response to tumor necrosis factor

monocyte activation

response to hydrogen peroxide

laminin binding

metal ion binding

positive regulation of protein secretion

positive regulation of membrane protein ectodomain proteolysis

PMA-inducible membrane protein ectodomain proteolysis

response to glucocorticoid stimulus

positive regulation of keratinocyte migration

response to calcium ion

 
203811_s_at -1.038 7.287 -2.702 1.625e-02 0.408 -3.063 DNAJB4 DnaJ (Hsp40) homolog, subfamily B, member 4 1 78243223 NM_007034 1p31.1 Hs.13852 11

protein folding

response to unfolded protein

response to heat

heat shock protein binding

unfolded protein binding

 
243709_at 0.470 4.080 2.701 1.629e-02 0.409 -3.065 SLC38A9 solute carrier family 38, member 9 5 -54957432 BG054799 5q11.2 Hs.649685 3

ion transport

sodium ion transport

amino acid transport

membrane

integral to membrane

sodium ion binding

 
212992_at 0.297 3.712 2.700 1.631e-02 0.409 -3.066 AHNAK2 AHNAK nucleoprotein 2 14 -104474635 AI935123 14q32.33 Hs.441783 3

protein binding

nucleus

cytoplasm

keratinization

 
203065_s_at 0.524 9.957 2.699 1.634e-02 0.409 -3.068 CAV1 caveolin 1, caveolae protein, 22kDa 7 115952074 NM_001753 7q31.1 Hs.74034 318

Golgi membrane

Golgi membrane

inactivation of MAPK activity

vasculogenesis

response to hypoxia

negative regulation of endothelial cell proliferation

intracellular

endoplasmic reticulum

Golgi apparatus

lipid particle

plasma membrane

caveola

triglyceride metabolic process

calcium ion transport

endocytosis

regulation of smooth muscle contraction

skeletal muscle tissue development

protein localization

positive regulation of calcium ion transport into cytosol

cholesterol binding

integral to membrane

vesicle organization

peptidase activator activity

regulation of fatty acid metabolic process

lipid storage

regulation of blood coagulation

cholesterol transport

negative regulation of epithelial cell differentiation

mammary gland development

maintenance of protein location in cell

response to progesterone stimulus

protein complex scaffold

nitric oxide homeostasis

cholesterol homeostasis

negative regulation of MAPKKK cascade

response to estrogen stimulus

interspecies interaction between organisms

negative regulation of nitric oxide biosynthetic process

positive regulation of vasoconstriction

negative regulation of vasodilation

negative regulation of JAK-STAT cascade

perinuclear region of cytoplasm

positive regulation of metalloenzyme activity

nitric-oxide synthase binding

protein homooligomerization

cytosolic calcium ion homeostasis

response to calcium ion

membrane depolarization

regulation of peptidase activity

mammary gland involution

Focal adhesion

225701_at 0.297 5.259 2.699 1.635e-02 0.409 -3.069 AKNA AT-hook transcription factor 9 -116136254 AK024431 9q32 Hs.494895 5

DNA binding

nucleus

regulation of transcription

 
225985_at 0.214 4.297 2.698 1.638e-02 0.409 -3.070 PRKAA1 protein kinase, AMP-activated, alpha 1 catalytic subunit 5 -40795237 AI935917 5p12 Hs.43322 68

nucleotide binding

activation of MAPK activity

magnesium ion binding

response to hypoxia

protein serine/threonine kinase activity

cAMP-dependent protein kinase activity

protein binding

ATP binding

intracellular

glucose metabolic process

fatty acid biosynthetic process

signal transduction

transferase activity

fatty acid oxidation

positive regulation of cholesterol biosynthetic process

positive regulation of anti-apoptosis

negative regulation of glucosylceramide biosynthetic process

Regulation of autophagy

mTOR signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

Hypertrophic cardiomyopathy (HCM)

212515_s_at -0.630 8.010 -2.698 1.638e-02 0.409 -3.070 DDX3X DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked X 41077594 BG492602 Xp11.3-p11.23 Hs.719127 34

nucleotide binding

DNA binding

RNA binding

ATP-dependent RNA helicase activity

helicase activity

protein binding

ATP binding

nucleus

cytoplasm

plasma membrane

nuclear speck

hydrolase activity

interspecies interaction between organisms

RIG-I-like receptor signaling pathway

202704_at -0.463 10.582 -2.697 1.639e-02 0.409 -3.071 TOB1 transducer of ERBB2, 1 17 -46294585 AA675892 17q21 Hs.709952 Hs.714409 Hs.719207 29

transcription corepressor activity

SH3/SH2 adaptor activity

cytoplasm

SMAD protein nuclear translocation

negative regulation of cell proliferation

negative regulation of BMP signaling pathway

negative regulation of osteoblast differentiation

SMAD binding

 
224642_at -0.739 7.117 -2.697 1.640e-02 0.409 -3.071 FYTTD1 forty-two-three domain containing 1 3 198960820, 198961020, 198961657 BG291550 3q29 Hs.277533 6    
1569701_at -0.591 3.757 -2.697 1.640e-02 0.409 -3.071 PER3 period homolog 3 (Drosophila) 1 7767349 BC036937 1p36.23 Hs.162200 35

signal transducer activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

signal transduction

rhythmic process

Circadian rhythm - mammal

1554077_a_at 0.317 5.760 2.697 1.642e-02 0.409 -3.072 TMEM53 transmembrane protein 53 1 -44892087 BC007521 1p34.1 Hs.22157 5

Golgi apparatus

plasma membrane

focal adhesion

integral to membrane

 
218285_s_at 0.225 8.077 2.697 1.642e-02 0.409 -3.072 BDH2 3-hydroxybutyrate dehydrogenase, type 2 4 -104218230 NM_020139 4q24 Hs.124696 7

3-hydroxybutyrate dehydrogenase activity

binding

cytoplasm

mitochondrion

fatty acid beta-oxidation

oxidoreductase activity

NAD or NADH binding

oxidation reduction

Synthesis and degradation of ketone bodies

Butanoate metabolism

Metabolic pathways

1557119_a_at 0.302 5.833 2.696 1.644e-02 0.409 -3.073 ZNF575 zinc finger protein 575 19 48729179 AK057129 19q13.31 Hs.213534 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
209678_s_at 0.349 6.378 2.696 1.645e-02 0.409 -3.074 PRKCI protein kinase C, iota 3 171422913 L18964 3q26.3 Hs.478199 91

polarisome

nucleotide binding

protein kinase C activity

protein binding

ATP binding

phospholipid binding

nucleus

cytoplasm

endosome

cytosol

protein amino acid phosphorylation

protein targeting to membrane

cytoskeleton organization

actin filament organization

intracellular signaling cascade

zinc ion binding

membrane

membrane organization

vesicle-mediated transport

apical plasma membrane

transferase activity

diacylglycerol binding

cellular response to insulin stimulus

establishment of apical/basal cell polarity

eye photoreceptor cell development

establishment or maintenance of epithelial cell apical/basal polarity

cell-cell junction organization

positive regulation of glucose import

metal ion binding

secretion

Golgi vesicle budding

regulation of establishment of protein localization

Endocytosis

Tight junction

Insulin signaling pathway

241813_at -0.547 5.183 -2.695 1.648e-02 0.409 -3.075 MBD1 methyl-CpG binding domain protein 1 18 -46049213 BG252318 18q21 Hs.405610 40

transcription factor activity

transcription corepressor activity

protein binding

nucleus

transcription from RNA polymerase II promoter

zinc ion binding

methyl-CpG binding

negative regulation of transcription

nuclear speck

metal ion binding

 
1552470_a_at 0.370 5.231 2.695 1.648e-02 0.409 -3.076 ABHD11 abhydrolase domain containing 11 7 -72789980, -72789935, -72788362, -72788362 NM_148914 7q11.23 Hs.647045 9

molecular_function

cellular_component

biological_process

hydrolase activity

 
204526_s_at -0.553 8.010 -2.694 1.649e-02 0.409 -3.076 TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 2 -100990121 NM_007063 2q11.2 Hs.442657 8

GTPase activator activity

Rab GTPase activator activity

intracellular

blood circulation

positive regulation of cell proliferation

membrane

regulation of Rab GTPase activity

 
204263_s_at 0.425 6.825 2.694 1.649e-02 0.409 -3.076 CPT2 carnitine palmitoyltransferase 2 1 53434688 M58581 1p32 Hs.713535 53

carnitine O-palmitoyltransferase activity

carnitine O-palmitoyltransferase activity

mitochondrion

mitochondrial inner membrane

mitochondrial inner membrane

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

transport

carnitine shuttle

acyltransferase activity

membrane

transferase activity

regulation of fatty acid oxidation

Fatty acid metabolism

PPAR signaling pathway

233193_x_at 0.224 6.327 2.694 1.652e-02 0.410 -3.078 INTS4 integrator complex subunit 4 11 -77267413 AK000455 11q14.1 Hs.533723 3

protein binding

nucleus

snRNA processing

integrator complex

 
230071_at 0.309 4.856 2.693 1.653e-02 0.410 -3.078 SEPT11 septin 11 4 78089918 AI333326 4q21.1 Hs.128199 16

nucleotide binding

stress fiber

protein binding

GTP binding

cell cycle

septin complex

protein heterooligomerization

cell division

 
1556436_at 0.297 3.392 2.693 1.654e-02 0.410 -3.079 C8orf50 chromosome 8 open reading frame 50 8   BC043205 8p21.1 Hs.667366 1    
205181_at 0.319 6.308 2.693 1.655e-02 0.410 -3.079 ZNF193 zinc finger protein 193 6 28301051 NM_006299 6p21.3 Hs.100921 8

transcription factor activity

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
212161_at 0.232 4.624 2.692 1.658e-02 0.410 -3.081 AP2A2 adaptor-related protein complex 2, alpha 2 subunit 11 915840 AA994666 11p15.5 Hs.19121 41

protein binding

cytosol

plasma membrane

plasma membrane

coated pit

intracellular protein transport

endocytosis

lipid binding

protein transporter activity

membrane coat

AP-2 adaptor complex

regulation of defense response to virus by virus

Endocytosis

Huntington's disease

208715_at -0.218 7.162 -2.691 1.659e-02 0.410 -3.082 TMCO1 transmembrane and coiled-coil domains 1 1 -163960151 BF002031 1q22-q25 Hs.31498 Hs.715707 12

endoplasmic reticulum

Golgi apparatus

membrane

integral to membrane

 
225726_s_at 0.655 5.398 2.691 1.660e-02 0.410 -3.082 PLEKHH1 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 14 67069760 AB033026 14q24.1 Hs.594236 4

binding

cytoskeleton

 
227970_at -0.467 8.917 -2.691 1.660e-02 0.410 -3.082 GPR157 G protein-coupled receptor 157 1 -9087062 AK026883 1p36.23 Hs.632367 5

G-protein coupled receptor activity

plasma membrane

G-protein coupled receptor protein signaling pathway

integral to membrane

 
243452_at 0.377 3.711 2.690 1.663e-02 0.411 -3.084 LOC646778 hypothetical LOC646778 18   BE895304 18q12.1 Hs.631680 1    
227711_at 1.045 3.836 2.690 1.664e-02 0.411 -3.084 GTSF1 gametocyte specific factor 1 12 -53136002 BG150433 12q13.13 Hs.524476 3

cytoplasm

zinc ion binding

metal ion binding

 
230442_at 0.356 3.783 2.689 1.666e-02 0.411 -3.085 MTHFSD methenyltetrahydrofolate synthetase domain containing 16 -85121283, -85121283, -85121282 AI700675 16q24.1 Hs.343627 2

nucleotide binding

RNA binding

ATP binding

folic acid and derivative biosynthetic process

5-formyltetrahydrofolate cyclo-ligase activity

 
209939_x_at 0.541 8.223 2.689 1.667e-02 0.411 -3.086 CFLAR CASP8 and FADD-like apoptosis regulator 2 201689060, 201689134, 201691631 AF005775 2q33-q34 Hs.390736 163

cysteine-type endopeptidase activity

protein binding

proteolysis

anti-apoptosis

induction of apoptosis by extracellular signals

regulation of apoptosis

positive regulation of I-kappaB kinase/NF-kappaB cascade

interspecies interaction between organisms

Apoptosis

1559584_a_at 0.293 2.523 2.688 1.670e-02 0.411 -3.087 C16orf54 chromosome 16 open reading frame 54 16 -29661286, -41077 BC025741 16p11.2 Hs.331095 7

membrane

integral to membrane

 
222673_x_at 0.496 5.100 2.688 1.670e-02 0.411 -3.087 FAM122B family with sequence similarity 122B X -133731261 AI582192 Xq26.3 Hs.404706 10    
204450_x_at -0.310 4.026 -2.688 1.672e-02 0.411 -3.088 APOA1 apolipoprotein A-I 11 -116211678, 13497 NM_000039 11q23-q24 Hs.633003 424

beta-amyloid binding

negative regulation of cytokine secretion during immune response

phospholipid binding

extracellular region

extracellular region

endoplasmic reticulum lumen

lipid metabolic process

phosphatidylcholine biosynthetic process

lipid transport

G-protein coupled receptor protein signaling pathway

steroid metabolic process

cholesterol metabolic process

positive regulation of cholesterol esterification

negative regulation of very-low-density lipoprotein particle remodeling

cholesterol binding

cholesterol transporter activity

cholesterol transporter activity

enzyme binding

endocytic vesicle

cytoplasmic vesicle

Cdc42 protein signal transduction

cholesterol efflux

phospholipid efflux

apolipoprotein A-I receptor binding

very-low-density lipoprotein particle

spherical high-density lipoprotein particle

high-density lipoprotein particle assembly

high-density lipoprotein particle clearance

lipoprotein metabolic process

cholesterol homeostasis

identical protein binding

reverse cholesterol transport

negative regulation of interleukin-1 beta secretion

protein stabilization

positive regulation of hydrolase activity

phosphatidylcholine-sterol O-acyltransferase activator activity

cholesterol import

high-density lipoprotein receptor binding

PPAR signaling pathway

200733_s_at -0.362 10.246 -2.687 1.675e-02 0.411 -3.090 PTP4A1 protein tyrosine phosphatase type IVA, member 1 6 64339878 U48296 6q12 Hs.227777 Hs.706850 28

protein tyrosine phosphatase activity

cytoplasm

early endosome

endoplasmic reticulum

spindle

plasma membrane

protein amino acid dephosphorylation

cell cycle

multicellular organismal development

hydrolase activity

 
226210_s_at -1.083 5.071 -2.687 1.675e-02 0.411 -3.090 MEG3 maternally expressed 3 (non-protein coding) 14 100362197, 100362215 AI291123 14q32 Hs.525589 Hs.593706 Hs.654863 Hs.655127 11    
214246_x_at 0.319 7.489 2.687 1.675e-02 0.411 -3.090 MINK1 misshapen-like kinase 1 (zebrafish) 17 4683350 AI859060 17p13.2 Hs.443417 16

nucleotide binding

protein serine/threonine kinase activity

small GTPase regulator activity

protein binding

ATP binding

protein amino acid phosphorylation

response to stress

protein kinase cascade

JNK cascade

multicellular organismal development

transferase activity

 
218193_s_at -0.436 5.717 -2.686 1.676e-02 0.411 -3.090 GOLT1B golgi transport 1 homolog B (S. cerevisiae) 12 21545965 NM_016072 12p12.1 Hs.62275 10

signal transducer activity

endoplasmic reticulum

Golgi apparatus

protein transport

membrane

integral to membrane

vesicle-mediated transport

positive regulation of I-kappaB kinase/NF-kappaB cascade

 
203662_s_at -0.442 9.137 -2.686 1.676e-02 0.411 -3.090 TMOD1 tropomodulin 1 9 99326257 NM_003275 9q22.3 Hs.494595 18

actin binding

tropomyosin binding

nucleus

cytoplasm

membrane

myofibril

myofibril assembly

cortical cytoskeleton

 
205120_s_at -0.361 8.075 -2.686 1.677e-02 0.411 -3.091 SGCB sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) 4 -52581617 U29586 4q12 Hs.438953 28

cytoplasm

cytoskeleton

plasma membrane

integral to plasma membrane

cytoskeleton organization

muscle organ development

sarcoglycan complex

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

217077_s_at -0.335 4.156 -2.686 1.677e-02 0.411 -3.091 GABBR2 gamma-aminobutyric acid (GABA) B receptor, 2 9 -100090186 AF095723 9q22.1-q22.3 Hs.198612 27

receptor activity

G-protein coupled receptor activity

GABA-B receptor activity

protein binding

cytoplasm

plasma membrane

integral to plasma membrane

signal transduction

negative regulation of adenylate cyclase activity

gamma-aminobutyric acid signaling pathway

synaptic transmission

cell junction

neuron projection

synapse

postsynaptic membrane

Neuroactive ligand-receptor interaction

207018_s_at 0.185 2.294 2.684 1.684e-02 0.412 -3.095 RAB27B RAB27B, member RAS oncogene family 18 50646837 NM_004163 18q21.2 Hs.25318 14

nucleotide binding

GTPase activity

protein binding

GTP binding

Golgi apparatus

small GTPase mediated signal transduction

protein transport

membrane

 
1553269_at 0.515 3.389 2.683 1.686e-02 0.412 -3.096 ZNF718 zinc finger protein 718 4 43276 CA411757 4p16.3 Hs.428579 Hs.636638 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
210407_at -0.477 5.498 -2.683 1.687e-02 0.412 -3.096 PPM1A protein phosphatase 1A (formerly 2C), magnesium-dependent, alpha isoform 14 59782222, 59785718, 59785718 AF070670 14q23.1 Hs.130036 28

magnesium ion binding

protein serine/threonine phosphatase activity

signal transducer activity

cellular_component

membrane fraction

voltage-gated calcium channel complex

protein amino acid dephosphorylation

protein C-terminus binding

protein serine/threonine phosphatase complex

hydrolase activity

manganese ion binding

positive regulation of Wnt receptor signaling pathway

neuron projection

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of transcription, DNA-dependent

MAPK signaling pathway

226043_at 0.222 6.571 2.683 1.689e-02 0.412 -3.097 GPSM1 G-protein signaling modulator 1 (AGS3-like, C. elegans) 9 138341752, 138341752, 138367329 AI242661 9q34.3 Hs.239370 14

GTPase activator activity

binding

cytoplasm

endoplasmic reticulum

Golgi apparatus

cytosol

plasma membrane

signal transduction

multicellular organismal development

nervous system development

cell differentiation

 
211628_x_at 0.342 12.146 2.682 1.691e-02 0.412 -3.099 FTHP1 ferritin, heavy polypeptide pseudogene 1 6   J04755 6p21.3-p12 Hs.453583 1    
206710_s_at 0.863 4.228 2.681 1.693e-02 0.412 -3.099 EPB41L3 erythrocyte membrane protein band 4.1-like 3 18 -5382387 NM_012307 18p11.32 Hs.213394 39

actin binding

structural molecule activity

cytoplasm

cytoskeleton

plasma membrane

cell-cell junction

biological_process

extrinsic to membrane

cortical actin cytoskeleton organization

Tight junction

226531_at -0.679 7.220 -2.681 1.693e-02 0.412 -3.099 ORAI1 ORAI calcium release-activated calcium modulator 1 12 120548837 AL530596 12q24.31 Hs.55148 56

ion channel activity

calcium ion binding

protein binding

plasma membrane

integral to plasma membrane

ion transport

immune response

store-operated calcium channel activity

positive regulation of calcium ion transport

 
202390_s_at 0.230 6.075 2.681 1.694e-02 0.412 -3.100 HTT huntingtin 4 3046205 NM_002111 4p16.3 Hs.518450 252

urea cycle

citrulline metabolic process

transcription corepressor activity

transporter activity

calcium channel regulator activity

protein binding

soluble fraction

nucleus

cytoplasm

Golgi apparatus

protein import into nucleus

ER to Golgi vesicle-mediated transport

anti-apoptosis

induction of apoptosis

mitochondrion organization

endoplasmic reticulum organization

dopamine receptor signaling pathway

spermatogenesis

gastrulation

brain development

cell aging

locomotory behavior

microtubule binding

axon cargo transport

associative learning

determination of adult lifespan

visual learning

pathogenesis

embryonic development

organ morphogenesis

anterior/posterior pattern formation

cytoplasmic membrane-bounded vesicle

endosome transport

inclusion body

lactate biosynthetic process from pyruvate

quinolinate biosynthetic process

striatum development

olfactory lobe development

neural plate formation

neurogenesis

insulin secretion

axon

social behavior

hormone metabolic process

negative regulation of neuron apoptosis

regulation of mitochondrial membrane permeability

vesicle transport along microtubule

regulation of synaptic plasticity

paraxial mesoderm formation

neuron development

diazepam binding

response to calcium ion

regulation of mitochondrial membrane potential

L-glutamate import

iron ion homeostasis

Huntington's disease

202954_at 0.248 4.464 2.681 1.694e-02 0.412 -3.100 UBE2C ubiquitin-conjugating enzyme E2C 20 43874661, 43875078 NM_007019 20q13.12 Hs.93002 33

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

nucleoplasm

cytosol

ubiquitin-dependent protein catabolic process

cell cycle

spindle organization

mitosis

cyclin catabolic process

protein ubiquitination

ligase activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

positive regulation of exit from mitosis

phosphoinositide-mediated signaling

regulation of protein metabolic process

cell division

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Ubiquitin mediated proteolysis

207312_at -0.831 7.698 -2.681 1.695e-02 0.412 -3.101 PHKG1 phosphorylase kinase, gamma 1 (muscle) 7 -56116168 NM_006213 7p11.2 Hs.715728 23

nucleotide binding

protein serine/threonine kinase activity

phosphorylase kinase activity

calmodulin binding

ATP binding

phosphorylase kinase complex

carbohydrate metabolic process

glycogen biosynthetic process

protein amino acid phosphorylation

transferase activity

Calcium signaling pathway

Insulin signaling pathway

212850_s_at -0.575 5.496 -2.680 1.696e-02 0.412 -3.101 LRP4 low density lipoprotein receptor-related protein 4 11 -46834993 AA584297 11p11.2-p12 Hs.4930 7

receptor activity

calcium ion binding

cellular_component

endocytosis

biological_process

membrane

integral to membrane

 
218689_at 0.265 4.961 2.680 1.696e-02 0.412 -3.101 FANCF Fanconi anemia, complementation group F 11 -22600654 NM_022725 11p15 Hs.713574 27

molecular_function

protein binding

cellular_component

nucleus

DNA repair

response to DNA damage stimulus

biological_process

 
213589_s_at 0.328 5.805 2.679 1.701e-02 0.413 -3.103 B3GNTL1 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 17 -78494955 AW468201 17q25.3 Hs.718480 5

transferase activity, transferring glycosyl groups

 
218651_s_at 0.864 6.598 2.679 1.701e-02 0.413 -3.104 LARP6 La ribonucleoprotein domain family, member 6 15 -68930821, -68910942 NM_018357 15q23 Hs.416755 5

RNA binding

nucleus

cytoplasm

RNA processing

ribonucleoprotein complex

 
201078_at -0.429 7.859 -2.679 1.701e-02 0.413 -3.104 TM9SF2 transmembrane 9 superfamily member 2 13 98951728 NM_004800 13q32.3 Hs.654824 9

endosome

integral to plasma membrane

transport

membrane

 
209699_x_at 1.059 9.901 2.678 1.703e-02 0.413 -3.105 AKR1C2 aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III) 10 -5021964 U05598 10p15-p14 Hs.460260 Hs.567256 35

cytoplasm

lipid metabolic process

prostaglandin metabolic process

digestion

steroid metabolic process

oxidoreductase activity

carboxylic acid binding

bile acid binding

3-alpha-hydroxysteroid dehydrogenase (A-specific) activity

trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity

oxidation reduction

Metabolism of xenobiotics by cytochrome P450

206690_at 0.244 4.003 2.678 1.705e-02 0.413 -3.106 ACCN1 amiloride-sensitive cation channel 1, neuronal 17 -28364218, -28364218 NM_001094 17q12 Hs.368417 18

ion channel activity

protein binding

plasma membrane

integral to plasma membrane

ion transport

sodium ion transport

synaptic transmission

central nervous system development

peripheral nervous system development

amiloride-sensitive sodium channel activity

sodium ion binding

Taste transduction

209772_s_at 0.258 3.933 2.678 1.705e-02 0.413 -3.106 CD24 CD24 molecule 6 -19611913 X69397 6q21 Hs.644105 Hs.694721 65

response to hypoxia

cell activation

regulation of cytokine-mediated signaling pathway

response to molecule of bacterial origin

pre-B cell differentiation

leukocyte migration during inflammatory response

immune response-regulating cell surface receptor signaling pathway

positive regulation of T cell mediated immune response to tumor cell

positive regulation of inflammatory response to antigenic stimulus

positive regulation of B cell apoptosis

signal transducer activity

protein binding

membrane fraction

plasma membrane

oxygen and reactive oxygen species metabolic process

heterophilic cell adhesion

leukocyte adhesion

elevation of cytosolic calcium ion concentration

neuromuscular synaptic transmission

negative regulation of neuroblast proliferation

induction of apoptosis by extracellular signals

induction of apoptosis by intracellular signals

apoptotic mitochondrial changes

external side of plasma membrane

Wnt receptor signaling pathway

cell migration

protein kinase binding

carbohydrate binding

apoptotic nuclear changes

protein tyrosine kinase activator activity

regulation of epithelial cell differentiation

negative regulation of B cell proliferation

neuron projection development

anchored to membrane

T cell costimulation

anchored to external side of plasma membrane

microvillus membrane

B cell receptor transport into membrane raft

chemokine receptor transport out of membrane raft

negative regulation of transforming growth factor-beta3 production

positive regulation of integrin activation

positive regulation of cell-cell adhesion mediated by integrin

negative regulation of erythrocyte clearance

homotypic cell-cell adhesion

negative regulation of erythrocyte aggregation

positive regulation of T cell homeostatic proliferation

positive regulation of activated T cell proliferation

regulation of phosphorylation

cholesterol homeostasis

positive regulation of MAP kinase activity

regulation of MAPKKK cascade

eukaryotic cell surface binding

response to estrogen stimulus

membrane raft

regulation of B cell differentiation

negative regulation of neuron differentiation

respiratory burst

negative regulation of T cell homeostatic proliferation

positive regulation of alpha-beta T cell proliferation

synaptic vesicle endocytosis

positive regulation of peptidyl-tyrosine phosphorylation

positive regulation of calcium-mediated signaling

cilium membrane

 
219643_at -1.578 5.193 -2.678 1.706e-02 0.413 -3.106 LRP1B low density lipoprotein-related protein 1B (deleted in tumors) 2 -140705465 NM_018557 2q21.2 Hs.656461 14

receptor activity

low-density lipoprotein receptor activity

calcium ion binding

protein binding

membrane fraction

receptor-mediated endocytosis

protein transport

membrane

integral to membrane

 
242195_x_at 0.316 7.556 2.678 1.706e-02 0.413 -3.106 NUMBL numb homolog (Drosophila)-like 19 -45863651 BE350811 19q13.13-q13.2 Hs.326953 15

protein binding

cytoplasm

nervous system development

neuroblast proliferation

axonogenesis

forebrain development

adherens junction organization

Notch signaling pathway

227271_at 0.387 6.348 2.677 1.708e-02 0.413 -3.107 FGF11 fibroblast growth factor 11 17 7283412 AU151265 17p13.1 Hs.655193 7

signal transduction

cell-cell signaling

nervous system development

growth factor activity

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

235565_at 0.333 3.407 2.677 1.708e-02 0.413 -3.107 ZNF786 zinc finger protein 786 7 -148397665 N30616 7q36.1 Hs.31743 7

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
213569_at 0.261 5.432 2.677 1.709e-02 0.413 -3.108 ANGEL1 angel homolog 1 (Drosophila) 14 -76323338 AV705485 14q24.3 Hs.497448 5    
214975_s_at -0.362 3.866 -2.676 1.710e-02 0.413 -3.108 MTMR1 myotubularin related protein 1 X 149612526 AK001816 Xq28 Hs.347187 10

protein tyrosine phosphatase activity

cellular_component

plasma membrane

dephosphorylation

hydrolase activity

phosphatase activity

Fructose and mannose metabolism

Thiamine metabolism

Riboflavin metabolism

Metabolic pathways

230405_at 0.241 7.327 2.676 1.710e-02 0.413 -3.108 C5orf56 chromosome 5 open reading frame 56 5 131774571 AI143416 5q31.1 Hs.658288 1    
209657_s_at -0.560 8.384 -2.675 1.713e-02 0.413 -3.110 HSF2 heat shock transcription factor 2 6 122762394 M65217 6q22.31 Hs.158195 28

transcription factor activity

transcription coactivator activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

response to stress

spermatogenesis

protein homodimerization activity

sequence-specific DNA binding

 
1556448_a_at -0.243 3.214 -2.675 1.716e-02 0.414 -3.111 LOC285370 hypothetical LOC285370 3 -10776168 AI357576 3p25.3 Hs.157613 1    
221589_s_at 0.684 8.211 2.674 1.717e-02 0.414 -3.112 ALDH6A1 aldehyde dehydrogenase 6 family, member A1 14 -73596624 AW612403 14q24.3 Hs.293970 9

acyl-CoA binding

methylmalonate-semialdehyde dehydrogenase (acylating) activity

mitochondrion

valine metabolic process

oxidoreductase activity

malonate-semialdehyde dehydrogenase (acetylating) activity

thymine metabolic process

brown fat cell differentiation

oxidation reduction

Valine, leucine and isoleucine degradation

Inositol phosphate metabolism

Propanoate metabolism

Metabolic pathways

208758_at -0.463 8.425 -2.674 1.717e-02 0.414 -3.112 ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase 2 215884936 D89976 2q35 Hs.90280 27

IMP cyclohydrolase activity

phosphoribosylaminoimidazolecarboxamide formyltransferase activity

protein binding

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

purine nucleotide biosynthetic process

IMP biosynthetic process

transferase activity

hydrolase activity

organ regeneration

Purine metabolism

One carbon pool by folate

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of plant hormones

Metabolic pathways

242870_at 0.262 3.249 2.674 1.718e-02 0.414 -3.113 RIMKLB ribosomal modification protein rimK-like family member B 12 8741784 BE551073 12p13.31 Hs.504670 4

nucleotide binding

catalytic activity

ATP binding

protein modification process

manganese ion binding

metal ion binding

 
226718_at -0.345 6.567 -2.673 1.723e-02 0.415 -3.115 AMIGO1 adhesion molecule with Ig-like domain 1 1 -109850968 AA001423 1p13.3 Hs.709892 5

protein binding

cell adhesion

homophilic cell adhesion

heterophilic cell adhesion

multicellular organismal development

nervous system development

axonal fasciculation

membrane

integral to membrane

cell differentiation

axon

myelination

cell projection

positive regulation of axonogenesis

 
206394_at -1.245 12.029 -2.672 1.723e-02 0.415 -3.115 MYBPC2 myosin binding protein C, fast type 19 55627971 NM_004533 19q13.33 Hs.85937 10

actin binding

protein binding

striated muscle thick filament

striated muscle contraction

cell adhesion

structural constituent of muscle

 
213002_at 0.453 5.961 2.672 1.724e-02 0.415 -3.116 MARCKS myristoylated alanine-rich protein kinase C substrate 6 114285219 AA770596 6q22.2 Hs.519909 Hs.712721 41

protein kinase C binding

calmodulin binding

cytoplasm

centrosome

cell cortex

actin cytoskeleton

membrane

germinal vesicle

actin filament binding

Fc gamma R-mediated phagocytosis

205450_at -0.751 8.175 -2.671 1.727e-02 0.415 -3.117 PHKA1 phosphorylase kinase, alpha 1 (muscle) X -71715388 NM_002637 Xq12-q13 Hs.201379 12

catalytic activity

phosphorylase kinase activity

calmodulin binding

cytoplasm

plasma membrane

carbohydrate metabolic process

glycogen metabolic process

generation of precursor metabolites and energy

intracellular membrane-bounded organelle

Calcium signaling pathway

Insulin signaling pathway

209184_s_at -0.889 7.140 -2.671 1.728e-02 0.415 -3.117 IRS2 insulin receptor substrate 2 13 -109204184 BF700086 13q34 Hs.442344 118

positive regulation of mesenchymal cell proliferation

signal transducer activity

insulin receptor binding

plasma membrane

signal transduction

brain development

insulin receptor signaling pathway

negative regulation of plasma membrane long-chain fatty acid transport

positive regulation of glucose metabolic process

regulation of lipid metabolic process

protein kinase binding

protein domain specific binding

positive regulation of cell migration

mammary gland development

positive regulation of fatty acid beta-oxidation

response to peptide hormone stimulus

phosphoinositide 3-kinase binding

positive regulation of glycogen biosynthetic process

positive regulation of glycogen biosynthetic process

positive regulation of glucose import

lipid homeostasis

Neurotrophin signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

Type II diabetes mellitus

242528_at 0.210 3.103 2.670 1.731e-02 0.415 -3.119 LOC285943 hypothetical protein LOC285943 7   AI473887 7p15.2 Hs.714774 1    
222660_s_at -0.211 3.727 -2.670 1.731e-02 0.415 -3.119 RNF38 ring finger protein 38 9 -36326398, -36326398, -36326398 AL136817 9p13 Hs.333503 12

protein binding

zinc ion binding

metal ion binding

 
242297_at 0.289 5.750 2.670 1.732e-02 0.415 -3.119 RREB1 ras responsive element binding protein 1 6 7053186 BF904033 6p25 Hs.298248 13

DNA binding

intracellular

nucleus

cytoplasm

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

Ras protein signal transduction

multicellular organismal development

zinc ion binding

transcription activator activity

nuclear speck

metal ion binding

 
226969_at -0.254 8.004 -2.670 1.732e-02 0.415 -3.120 MTR 5-methyltetrahydrofolate-homocysteine methyltransferase 1 235025203 AV706396 1q43 Hs.498187 219

dihydropteroate synthase activity

protein binding

intracellular

cytoplasm

cytosol

nervous system development

methyltransferase activity

zinc ion binding

cellular amino acid biosynthetic process

methionine synthase activity

methionine synthase activity

homocysteine S-methyltransferase activity

methionine biosynthetic process

folic acid and derivative biosynthetic process

transferase activity

cobalamin binding

cellular metabolic process

metal ion binding

cobalt ion binding

Cysteine and methionine metabolism

One carbon pool by folate

Metabolic pathways

226120_at 0.292 4.104 2.670 1.733e-02 0.415 -3.120 TTC8 tetratricopeptide repeat domain 8 14 88360730 AW293939 14q31.3 Hs.303055 7

binding

cytoplasm

centrosome

plasma membrane

cilium

visual perception

cell projection organization

BBSome

response to stimulus

cilium membrane

 
200071_at -0.483 8.339 -2.669 1.735e-02 0.415 -3.121 SMNDC1 survival motor neuron domain containing 1 10 -112042787 BF224259 10q23 Hs.632093 12

spliceosome assembly

RNA binding

protein binding

nucleus

spliceosomal complex

cytoplasm

mRNA processing

apoptosis

induction of apoptosis

RNA splicing

Cajal body

nuclear speck

RNA splicing factor activity, transesterification mechanism

 
207306_at -0.357 5.753 -2.669 1.735e-02 0.415 -3.121 TCF15 transcription factor 15 (basic helix-loop-helix) 20 -532636 NM_004609 20p13 Hs.437 4

somitogenesis

respiratory system process

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

multicellular organismal development

death

tail morphogenesis

eating behavior

ear development

skin development

regulation of transcription

paraxial mesoderm development

muscle organ morphogenesis

skeletal system morphogenesis

neuromuscular process controlling posture

 
203627_at -0.645 4.933 -2.669 1.737e-02 0.415 -3.122 IGF1R insulin-like growth factor 1 receptor 15 97010283 AI830698 15q26.3 Hs.643120 Hs.653608 Hs.714012 315

nucleotide binding

receptor activity

insulin-like growth factor receptor activity

insulin receptor binding

ATP binding

microsome

integral to plasma membrane

anti-apoptosis

immune response

signal transduction

brain development

positive regulation of cell proliferation

insulin receptor signaling pathway

organ morphogenesis

phosphoinositide 3-kinase cascade

membrane

transferase activity

male sex determination

positive regulation of cell migration

mammary gland development

insulin-like growth factor I binding

identical protein binding

phosphoinositide 3-kinase binding

insulin binding

insulin receptor substrate binding

positive regulation of DNA replication

protein amino acid autophosphorylation

insulin-like growth factor receptor signaling pathway

phosphoinositide-mediated signaling

protein tetramerization

Endocytosis

Focal adhesion

Adherens junction

Long-term depression

Pathways in cancer

Colorectal cancer

Glioma

Prostate cancer

Melanoma

1569069_s_at -0.336 6.322 -2.668 1.738e-02 0.415 -3.123 TDRD3 tudor domain containing 3 13 59868591, 59869427 BC020604 13q21.2 Hs.525061 12

nucleic acid binding

nucleus

cytoplasm

 
218378_s_at 0.281 7.029 2.668 1.739e-02 0.415 -3.123 PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 7 101823808 NM_024653 7q22.1 Hs.406395 6

double-stranded RNA binding

protein kinase inhibitor activity

protein binding

nucleus

nucleolus

negative regulation of protein kinase activity

protein kinase binding

negative regulation of phosphorylation

 
227678_at -0.914 6.963 -2.668 1.740e-02 0.416 -3.124 XRCC6BP1 XRCC6 binding protein 1 12 56621711 AI628122 12q14.1 Hs.61188 3

DNA-dependent protein kinase activity

DNA-dependent protein kinase-DNA ligase 4 complex

double-strand break repair via nonhomologous end joining

proteolysis

peptidase activity

metallopeptidase activity

zinc ion binding

metal ion binding

 
229106_at 0.311 6.218 2.668 1.740e-02 0.416 -3.124 DYNLL2 dynein, light chain, LC8-type 2 17 53515778 AA401429 17q22 Hs.514368 12

microtubule motor activity

protein binding

cytoplasm

cytosol

microtubule

plasma membrane

microtubule-based process

myosin complex

dynein complex

 
203498_at 0.877 8.886 2.667 1.742e-02 0.416 -3.125 RCAN2 regulator of calcineurin 2 6 -46296427 NM_005822 6p21.1-p12.3 Hs.440168 12

cellular_component

central nervous system development

calcium-mediated signaling

protein phosphatase 2B binding

 
216008_s_at -0.285 7.424 -2.666 1.745e-02 0.416 -3.126 ARIH2 ariadne homolog 2 (Drosophila) 3 48931284 AV694434 3p21.2-p21.3 Hs.633601 14

nucleic acid binding

protein binding

nucleus

ubiquitin-dependent protein catabolic process

multicellular organismal development

zinc ion binding

metal ion binding

 
207814_at 0.205 5.797 2.666 1.746e-02 0.416 -3.127 DEFA6 defensin, alpha 6, Paneth cell-specific 8 -6769628 NM_001926 8pter-p21 Hs.711 10

extracellular region

extracellular space

xenobiotic metabolic process

defense response to bacterium

defense response to fungus

 
213666_at 0.313 4.713 2.666 1.748e-02 0.416 -3.127 SEPT6 septin 6 X -118634936, -118633715 AK026589 Xq24 Hs.496666 22

nucleotide binding

cytokinesis

protein binding

protein binding

GTP binding

cellular_component

cell cycle

septin complex

 
219072_at 0.261 7.336 2.664 1.754e-02 0.417 -3.131 BCL7C B-cell CLL/lymphoma 7C 16 -30806616 NM_004765 16p11 Hs.658547 9

apoptosis

 
226748_at -0.591 8.208 -2.664 1.755e-02 0.417 -3.131 LYSMD2 LysM, putative peptidoglycan-binding, domain containing 2 15 -49802553, -49802553 AI674731 15q21.2 Hs.631693 3

cell wall macromolecule catabolic process

 
242282_at -0.190 6.080 -2.663 1.756e-02 0.417 -3.132 ZFPM1 zinc finger protein, multitype 1 16 87047514 AI889717 16q24.2 Hs.632218 12

DNA binding

protein binding

intracellular

nucleus

heart development

zinc ion binding

regulation of transcription

metal ion binding

 
227094_at 0.399 7.684 2.663 1.756e-02 0.417 -3.132 DHTKD1 dehydrogenase E1 and transketolase domain containing 1 10 12150939 AI934407 10p14 Hs.104980 Hs.711138 3

oxoglutarate dehydrogenase (succinyl-transferring) activity

mitochondrion

glycolysis

oxidoreductase activity

thiamin pyrophosphate binding

oxidation reduction

 
216594_x_at 1.055 9.978 2.663 1.756e-02 0.417 -3.132 AKR1C1 aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase) 10 4995453 S68290 10p15-p14 Hs.460260 37

aldo-keto reductase activity

cytoplasm

cytosol

xenobiotic metabolic process

digestion

bile acid metabolic process

bile acid and bile salt transport

oxidoreductase activity

intestinal cholesterol absorption

carboxylic acid binding

bile acid binding

cholesterol homeostasis

response to organophosphorus

20-alpha-hydroxysteroid dehydrogenase activity

3-alpha-hydroxysteroid dehydrogenase (B-specific) activity

trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity

indanol dehydrogenase activity

protein homooligomerization

oxidation reduction

Metabolism of xenobiotics by cytochrome P450

228425_at 0.528 4.928 2.663 1.757e-02 0.417 -3.132 LOC654433 hypothetical LOC654433 2 113710316 BF056746 2q13 Hs.656660 4    
206156_at 0.223 3.596 2.662 1.760e-02 0.418 -3.134 GJB5 gap junction protein, beta 5, 31.1kDa 1 34993307 NM_005268 1p35.1 Hs.198249 5

plasma membrane

connexon complex

cell communication

epidermis development

integral to membrane

cell junction

 
206349_at 0.756 5.306 2.661 1.762e-02 0.418 -3.135 LGI1 leucine-rich, glioma inactivated 1 10 95507555 NM_005097 10q24 Hs.533670 31

protein binding

extracellular region

nervous system development

cell proliferation

 
203022_at 0.363 5.552 2.661 1.765e-02 0.418 -3.136 RNASEH2A ribonuclease H2, subunit A 19 12778427 NM_006397 19p13.2 Hs.532851 8

RNA binding

endonuclease activity

ribonuclease H activity

ribonuclease activity

nucleus

DNA replication

RNA catabolic process

hydrolase activity

metal ion binding

DNA replication

202824_s_at -0.228 10.120 -2.661 1.765e-02 0.418 -3.136 TCEB1 transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) 8 -75021187 NM_005648 8q21.11 Hs.554594 46

protein binding

nucleus

nucleoplasm

cytosol

regulation of transcription from RNA polymerase II promoter

ubiquitin-dependent protein catabolic process

interspecies interaction between organisms

regulation of transcription

Ubiquitin mediated proteolysis

Pathways in cancer

Renal cell carcinoma

202058_s_at -0.656 5.315 -2.660 1.766e-02 0.418 -3.137 KPNA1 karyopherin alpha 1 (importin alpha 5) 3 -123623437 BC002374 3q21 Hs.161008 92

regulation of DNA recombination

protein binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

cytosol

NLS-bearing substrate import into nucleus

intracellular protein transport

nuclear localization sequence binding

protein transporter activity

interspecies interaction between organisms

 
229707_at 0.355 4.717 2.660 1.766e-02 0.418 -3.137 ZNF606 zinc finger protein 606 19 -63180252 AI817719 19q13.4 Hs.654967 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
36475_at 0.265 6.783 2.660 1.766e-02 0.418 -3.137 GCAT glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase) 22 36533900 Z97630 22q13.1 Hs.54609 6

mitochondrion

mitochondrial inner membrane

cellular amino acid metabolic process

acyltransferase activity

glycine C-acetyltransferase activity

biosynthetic process

transferase activity, transferring nitrogenous groups

pyridoxal phosphate binding

Glycine, serine and threonine metabolism

210282_at 0.611 3.368 2.660 1.768e-02 0.418 -3.138 ZMYM2 zinc finger, MYM-type 2 13 19430809 AL136621 13q11-q12 Hs.644041 29

protein binding

cellular_component

nucleus

biological_process

zinc ion binding

PML body

ubiquitin conjugating enzyme binding

regulation of transcription

metal ion binding

 
208656_s_at -0.268 9.947 -2.659 1.769e-02 0.418 -3.138 CCNI cyclin I 4 -78188198 AF135162 4q21.1 Hs.518827 7

spermatogenesis

 
208079_s_at 1.124 6.686 2.659 1.769e-02 0.418 -3.138 AURKA aurora kinase A 20 -54377851 NM_003158 20q13.2-q13.3 Hs.250822 196

nucleotide binding

mitotic cell cycle

protein serine/threonine kinase activity

protein binding

protein binding

ATP binding

nucleus

centrosome

spindle

protein amino acid phosphorylation

spindle organization

mitosis

transferase activity

ubiquitin protein ligase binding

regulation of protein stability

phosphoinositide-mediated signaling

 
238987_at -0.296 4.901 -2.658 1.773e-02 0.418 -3.140 B4GALT1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 9 -33100638 AL574435 9p13 Hs.272011 41

Golgi trans cisterna

epithelial cell development

acute inflammatory response

beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity

N-acetyllactosamine synthase activity

lactose synthase activity

extracellular region

Golgi apparatus

plasma membrane

carbohydrate metabolic process

lactose biosynthetic process

galactose metabolic process

protein amino acid terminal N-glycosylation

cell adhesion

binding of sperm to zona pellucida

penetration of zona pellucida

cytoskeletal protein binding

negative regulation of cell proliferation

glycoprotein biosynthetic process

oligosaccharide biosynthetic process

oligosaccharide biosynthetic process

external side of plasma membrane

integral to membrane

basolateral plasma membrane

transferase activity, transferring glycosyl groups

desmosome

glycocalyx

manganese ion binding

extracellular matrix organization

mammary gland development

brush border membrane

development of secondary sexual characteristics

metal ion binding

branching morphogenesis of a tube

leukocyte migration

regulation of cell motion

regulation of acrosome reaction

positive regulation of epithelial cell proliferation involved in wound healing

angiogenesis involved in wound healing

positive regulation of apoptosis involved in mammary gland involution

Galactose metabolism

N-Glycan biosynthesis

Keratan sulfate biosynthesis

Glycosphingolipid biosynthesis - lacto and neolacto series

Metabolic pathways

218999_at -0.573 7.217 -2.658 1.775e-02 0.418 -3.141 TMEM140 transmembrane protein 140 7 134483363 NM_018295 7q33 Hs.719309 8

membrane

integral to membrane

 
1555001_at -0.309 3.417 -2.658 1.776e-02 0.418 -3.142 IQCF1 IQ motif containing F1 3 -51903932 BC034228 3p21.2 Hs.671210 2    
214921_at 0.318 3.365 2.657 1.777e-02 0.418 -3.142 KCNMA1 potassium large conductance calcium-activated channel, subfamily M, alpha member 1 10 -78314641, -78299364 U02632 10q22.3 Hs.144795 89

magnesium ion binding

response to hypoxia

actin binding

catalytic activity

voltage-gated ion channel activity

voltage-gated potassium channel activity

calcium ion binding

protein binding

caveola

ion transport

potassium ion transport

response to osmotic stress

synaptic transmission

sensory perception of sound

circadian rhythm

adult walking behavior

voltage-gated potassium channel complex

metabolic process

external side of plasma membrane

integral to membrane

apical plasma membrane

regulation of action potential in neuron

cellular potassium ion homeostasis

potassium ion binding

regulation of aldosterone metabolic process

response to carbon monoxide

response to carbon monoxide

regulation of membrane potential

auditory receptor cell differentiation

positive regulation of apoptosis

terminal button

postsynaptic membrane

locomotor rhythm

negative regulation of cell volume

saliva secretion

cell maturation

neuromuscular process controlling balance

response to calcium ion

large conductance calcium-activated potassium channel activity

eye blink reflex

smooth muscle contraction involved in micturition

relaxation of vascular smooth muscle

Vascular smooth muscle contraction

232442_at -0.323 4.963 -2.657 1.777e-02 0.418 -3.142 LOC100131601 similar to hCG1980470 16   AU147442 16q23.1 Hs.479747 Hs.711220 1    
217356_s_at -0.642 10.442 -2.657 1.777e-02 0.418 -3.142 PGK1 phosphoglycerate kinase 1 X 77246321 S81916 Xq13 Hs.78771 52

nucleotide binding

phosphoglycerate kinase activity

ATP binding

cytoplasm

glycolysis

phosphorylation

transferase activity

Glycolysis / Gluconeogenesis

Carbon fixation in photosynthetic organisms

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

223758_s_at 0.597 6.231 2.657 1.777e-02 0.418 -3.142 GTF2H2 general transcription factor IIH, polypeptide 2, 44kDa 5 -70366706, 68891809, -972814, 350570 BC005345 5q12.2-q13.3 Hs.191356 Hs.655216 52

nucleotide-excision repair, DNA damage removal

transcription factor activity

nucleus

nucleoplasm

DNA repair

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

response to DNA damage stimulus

translation factor activity, nucleic acid binding

zinc ion binding

response to UV

regulation of transcription

metal ion binding

protein N-terminus binding

Basal transcription factors

Nucleotide excision repair

208215_x_at 0.297 5.327 2.657 1.779e-02 0.418 -3.143 DRD4 dopamine receptor D4 11 627304 NM_000797 11p15.5 Hs.99922 339

activation of MAPK activity

dopamine D4 receptor activity

behavioral fear response

response to amphetamine

receptor activity

G-protein coupled receptor activity

protein binding

plasma membrane

integral to plasma membrane

cellular calcium ion homeostasis

signal transduction

negative regulation of adenylate cyclase activity

inhibition of adenylate cyclase activity by dopamine receptor signaling pathway

drug binding

adult locomotory behavior

potassium channel regulator activity

SH3 domain binding

negative regulation of cAMP biosynthetic process

positive regulation of sodium:hydrogen antiporter activity

positive regulation of kinase activity

response to histamine

social behavior

regulation of dopamine metabolic process

behavioral response to cocaine

behavioral response to ethanol

arachidonic acid secretion

negative regulation of protein secretion

positive regulation of dopamine uptake

negative regulation of calcium ion transport via voltage-gated calcium channel activity

regulation of inhibitory postsynaptic membrane potential

Neuroactive ligand-receptor interaction

222992_s_at 0.236 12.030 2.657 1.779e-02 0.418 -3.143 NDUFB9 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa 8 125620523 AF261090 8q13.3 Hs.15977 13

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

transport

sensory perception of sound

NADH dehydrogenase (ubiquinone) activity

membrane

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

219134_at 0.509 6.497 2.657 1.779e-02 0.418 -3.143 ELTD1 EGF, latrophilin and seven transmembrane domain containing 1 1 -79128036 NM_022159 1p33-p32 Hs.132314 9

G-protein coupled receptor activity

G-protein coupled receptor activity

calcium ion binding

plasma membrane

neuropeptide signaling pathway

integral to membrane

integral to membrane

 
1564837_at -0.304 3.922 -2.656 1.780e-02 0.418 -3.144 LOC151760 hypothetical LOC151760 3   BC038577 3q13.13 Hs.124136 1    
218466_at -0.271 6.675 -2.656 1.780e-02 0.418 -3.144 TBC1D17 TBC1 domain family, member 17 19 55072640 NM_024682 19q13.33 Hs.631587 7

GTPase activator activity

Rab GTPase activator activity

intracellular

regulation of Rab GTPase activity

 
215447_at 0.395 3.836 2.656 1.781e-02 0.418 -3.144 TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 2 -188051550, -188037202 AL080215 2q32 Hs.516578 118

serine-type endopeptidase inhibitor activity

extracellular region

extracellular region

extracellular space

plasma membrane

blood coagulation, extrinsic pathway

Complement and coagulation cascades

217725_x_at -0.493 8.721 -2.655 1.784e-02 0.418 -3.145 SERBP1 SERPINE1 mRNA binding protein 1 1 -67646080 NM_015640 1p31 Hs.719078 22

RNA binding

mRNA 3'-UTR binding

protein binding

nucleus

cytoplasm

regulation of mRNA stability

perinuclear region of cytoplasm

 
229452_at 0.310 7.104 2.655 1.786e-02 0.418 -3.146 TMEM88 transmembrane protein 88 17 7699108 AL544576 17p13.1 Hs.389669 2

membrane

integral to membrane

 
232012_at 0.284 6.039 2.655 1.786e-02 0.418 -3.147 CAPN1 calpain 1, (mu/I) large subunit 11 64705918 AV691296 11q13 Hs.502842 78

calcium-dependent cysteine-type endopeptidase activity

calcium ion binding

protein binding

intracellular

cytoplasm

plasma membrane

proteolysis

peptidase activity

positive regulation of cell proliferation

Apoptosis

Alzheimer's disease

225782_at -0.585 9.363 -2.655 1.786e-02 0.418 -3.147 MSRB3 methionine sulfoxide reductase B3 12 63958754 AW027333 12q14.3 Hs.339024 6

mitochondrion

endoplasmic reticulum

peptide-methionine-(S)-S-oxide reductase activity

zinc ion binding

oxidoreductase activity

metal ion binding

oxidation reduction

 
225811_at -0.360 9.799 -2.655 1.786e-02 0.418 -3.147 C11orf58 chromosome 11 open reading frame 58 11 16716723 AI652868 11p15.1 Hs.719128 8

molecular_function

cellular_component

biological_process

 
236994_at -0.815 4.327 -2.654 1.787e-02 0.418 -3.147 FBXL4 F-box and leucine-rich repeat protein 4 6 -99428321 AW770868 6q16.1-q16.3 Hs.536850 6

ubiquitin ligase complex

nucleus

cytoplasm

ubiquitin-dependent protein catabolic process

 
218929_at -0.446 5.933 -2.653 1.791e-02 0.418 -3.149 CDKN2AIP CDKN2A interacting protein 4 184602782 NM_017632 4q35.1 Hs.699392 10

granular component

p53 binding

double-stranded RNA binding

intracellular

nucleus

nucleoplasm

nucleolus

positive regulation of signal transduction

negative regulation of cell growth

regulation of protein stability

 
203408_s_at -0.611 9.727 -2.653 1.792e-02 0.418 -3.149 SATB1 SATB homeobox 1 3 -18364269, -18364269 NM_002971 3p23 Hs.517717 34

negative regulation of transcription from RNA polymerase II promoter

double-stranded DNA binding

transcription factor activity

nucleus

chromatin organization

regulation of transcription, DNA-dependent

sequence-specific DNA binding

 
210596_at -0.272 6.170 -2.653 1.792e-02 0.418 -3.150 MAGT1 magnesium transporter 1 X -76968519 AF130104 Xq21.1 Hs.323562 Hs.710189 14

dolichyl-diphosphooligosaccharide-protein glycotransferase activity

endoplasmic reticulum

oligosaccharyltransferase complex

membrane

integral to membrane

protein amino acid N-linked glycosylation via asparagine

 
226459_at 0.363 4.705 2.653 1.793e-02 0.418 -3.150 PIK3AP1 phosphoinositide-3-kinase adaptor protein 1 10 -98343058 AW575754 10q24.1 Hs.310456 9

transmembrane receptor protein tyrosine kinase signaling protein activity

protein binding

cytoplasm

plasma membrane

B cell receptor signaling pathway

215926_x_at 0.326 6.627 2.652 1.795e-02 0.418 -3.151 SNAPC4 small nuclear RNA activating complex, polypeptide 4, 190kDa 9 -138389849 AK023513 9q34.3 Hs.113265 11

transcription factor activity

nucleus

snRNA-activating protein complex

snRNA transcription from RNA polymerase II promoter

snRNA transcription from RNA polymerase III promoter

regulation of transcription

 
200894_s_at -0.374 6.051 -2.652 1.795e-02 0.418 -3.151 FKBP4 FK506 binding protein 4, 59kDa 12 2774368 AA894574 12p13.33 Hs.524183 Hs.713721 47

peptidyl-prolyl cis-trans isomerase activity

ATP binding

GTP binding

FK506 binding

intracellular

nucleus

nucleolus

cytoplasm

protein folding

steroid hormone receptor complex assembly

copper ion transport

embryo implantation

isomerase activity

protein binding, bridging

heat shock protein binding

protein complex localization

glucocorticoid receptor binding

male sex differentiation

phosphoprotein binding

 
218921_at -0.279 5.578 -2.652 1.796e-02 0.418 -3.152 SIGIRR single immunoglobulin and toll-interleukin 1 receptor (TIR) domain 11 -395715, -395715 NM_021805 11p15.5 Hs.501624 13

negative regulation of cytokine-mediated signaling pathway

transmembrane receptor activity

protein binding

acute-phase response

signal transduction

membrane

integral to membrane

negative regulation of lipopolysaccharide-mediated signaling pathway

negative regulation of transcription factor activity

negative regulation of chemokine biosynthetic process

innate immune response

 
228383_at -0.347 5.970 -2.651 1.798e-02 0.419 -3.153 PNPLA7 patatin-like phospholipase domain containing 7 9 -139474225 AK024443 9q34.3 Hs.294147 6

nucleus

mitochondrion

lysosome

endoplasmic reticulum

microsome

lipid metabolic process

metabolic process

membrane

integral to membrane

hydrolase activity

 
216248_s_at -1.119 3.467 -2.650 1.802e-02 0.419 -3.154 NR4A2 nuclear receptor subfamily 4, group A, member 2 2 -156889189 S77154 2q22-q23 Hs.563344 76

transcription factor activity

steroid hormone receptor activity

nucleus

regulation of transcription, DNA-dependent

signal transduction

zinc ion binding

cellular response to extracellular stimulus

sequence-specific DNA binding

metal ion binding

response to protein stimulus

 
239843_at -0.255 3.550 -2.650 1.802e-02 0.419 -3.155 RIT1 Ras-like without CAAX 1 1 -154134224 AI655057 1q22 Hs.491234 17

nucleotide binding

calmodulin binding

GTP binding

intracellular

plasma membrane

signal transduction

small GTPase mediated signal transduction

small GTPase mediated signal transduction

 
221487_s_at -0.726 7.202 -2.649 1.806e-02 0.420 -3.157 ENSA endosulfine alpha 1 -148866145, -148862377, -148862377, -148861222, -148861222 AF157510 1q21.3 Hs.632456 15

receptor binding

cytoplasm

transport

response to nutrient

ion channel inhibitor activity

 
202352_s_at -0.263 8.329 -2.649 1.807e-02 0.420 -3.157 PSMD12 proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 17 -62767081, -62767080 AI446530 17q24.2 Hs.646575 39

protein binding

cytosol

proteasome regulatory particle

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

225649_s_at -0.668 6.829 -2.649 1.808e-02 0.420 -3.158 STK35 serine/threonine kinase 35 20 2031518 AA001414 20p13 Hs.100057 6

nucleotide binding

protein serine/threonine kinase activity

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

transferase activity

 
241812_at -0.342 5.277 -2.649 1.808e-02 0.420 -3.158 SPATS2L spermatogenesis associated, serine-rich 2-like 2 200878848, 200879229, 200879600 AV648669 2q33.1 Hs.120323 9    
218177_at -0.429 5.945 -2.648 1.810e-02 0.420 -3.159 CHMP1B chromatin modifying protein 1B 18 11841388 AA293502 18p11.21 Hs.656244 16

cytoplasm

endosome

cytosol

cell cycle

protein transport

membrane

protein domain specific binding

cell division

Endocytosis

225554_s_at -0.255 7.452 -2.648 1.812e-02 0.420 -3.159 ANAPC7 anaphase promoting complex subunit 7 12 -109297656, -109295087 AA131793 12q24.11 Hs.524741 30

binding

nucleoplasm

cytosol

cell cycle

mitosis

modification-dependent protein catabolic process

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

cell division

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

222921_s_at -0.311 6.677 -2.647 1.813e-02 0.420 -3.160 HEY2 hairy/enhancer-of-split related with YRPW motif 2 6 126112424 AF232238 6q21 Hs.144287 23

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

Notch signaling pathway

multicellular organismal development

nervous system development

organ morphogenesis

 
215268_at 0.545 3.981 2.647 1.815e-02 0.420 -3.161 KIAA0754 KIAA0754 1 39647762 AW663712 1p34.3 Hs.658760 1    
1569129_s_at 0.284 5.512 2.646 1.816e-02 0.420 -3.161 C3orf38 chromosome 3 open reading frame 38 3 88281582 BC016013 3p11.1 Hs.476944 Hs.518099 2

apoptosis

 
212116_at 0.261 5.761 2.646 1.816e-02 0.420 -3.162 TRIM27 tripartite motif-containing 27 6 -28978757, -330309, -128126 NM_006510 6p22 Hs.440382 27

negative regulation of transcription from RNA polymerase II promoter

DNA binding

transmembrane receptor protein tyrosine kinase activity

protein binding

intracellular

membrane fraction

nucleus

nucleoplasm

cytoplasm

integral to plasma membrane

spermatogenesis

zinc ion binding

cell proliferation

nuclear membrane

regulation of transcription

negative regulation of gene expression, epigenetic

metal ion binding

protein trimerization

 
230331_at -0.591 4.051 -2.646 1.817e-02 0.420 -3.162 C13orf39 chromosome 13 open reading frame 39 13 -102136097 AI333373 13q33.1 Hs.508623 1    
212261_at -0.184 7.311 -2.645 1.821e-02 0.420 -3.164 GIGYF2 GRB10 interacting GYF protein 2 2 233270258 AB014542 2q37.1 Hs.565319 23

protein binding

 
1564254_at -0.192 5.437 -2.645 1.823e-02 0.420 -3.165 KY kyphoscoliosis peptidase 3 -135801454 AK090526 3q22.2 Hs.146730 4

cytoplasm

cytoskeleton

peptidase activity

 
233647_s_at 0.336 6.259 2.644 1.823e-02 0.420 -3.165 CDADC1 cytidine and dCMP deaminase domain containing 1 13 48720103 AL138875 13q14.2 Hs.388220 2

zinc ion binding

hydrolase activity

metal ion binding

 
1556724_at 0.178 5.373 2.644 1.824e-02 0.420 -3.165 LOC100128398 hypothetical protein LOC100128398 19   BC036750 19q13.43 Hs.655081 1    
218373_at -0.344 9.125 -2.644 1.824e-02 0.420 -3.165 AKTIP AKT interacting protein 16 -52082692 NM_022476 16q12.2 Hs.380897 14

protein binding

cytoplasm

plasma membrane

apoptosis

endosome organization

lysosome organization

endosome to lysosome transport

protein transport

small conjugating protein ligase activity

HOPS complex

post-translational protein modification

early endosome to late endosome transport

regulation of protein metabolic process

FHF complex

 
230057_at -0.346 6.258 -2.644 1.824e-02 0.420 -3.165 LOC285178 hypothetical protein LOC285178 2   AI609832 2q35 Hs.586683 1    
204359_at 0.485 8.107 2.644 1.826e-02 0.421 -3.166 FLRT2 fibronectin leucine rich transmembrane protein 2 14 85066240 NM_013231 14q24-q32 Hs.533710 Hs.624735 Hs.719261 9

receptor signaling protein activity

proteinaceous extracellular matrix

integral to plasma membrane

cell adhesion

biological_process

membrane

protein binding, bridging

 
212665_at -0.315 7.184 -2.642 1.831e-02 0.421 -3.168 TIPARP TCDD-inducible poly(ADP-ribose) polymerase 3 157875072 AL556438 3q25.31 Hs.719169 11

vasculogenesis

kidney development

nucleic acid binding

NAD+ ADP-ribosyltransferase activity

protein binding

nucleus

protein amino acid ADP-ribosylation

nitrogen compound metabolic process

zinc ion binding

post-embryonic development

transferase activity, transferring glycosyl groups

hemopoiesis

multicellular organismal metabolic process

metal ion binding

platelet-derived growth factor receptor signaling pathway

skeletal system morphogenesis

smooth muscle tissue development

palate development

face morphogenesis

 
229809_at -0.352 5.722 -2.642 1.831e-02 0.421 -3.169 POU6F1 POU class 6 homeobox 1 12 -49866986, -49866986 AW445212 12q13.13 Hs.555886 10

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

brain development

heart development

muscle organ development

sequence-specific DNA binding

 
225474_at 0.530 5.455 2.642 1.834e-02 0.422 -3.170 MAGI1 membrane associated guanylate kinase, WW and PDZ domain containing 1 3 -65319983, -65314945 AI141556 3p14.1 Hs.651939 24

nucleotide binding

ATP binding

plasma membrane

cell-cell junction

tight junction

protein complex assembly

cell adhesion

cell surface receptor linked signal transduction

protein C-terminus binding

Tight junction

202128_at -0.348 6.577 -2.641 1.834e-02 0.422 -3.170 KIAA0317 KIAA0317 14 -74197707 NM_014821 14q24.3 Hs.497417 4

intracellular

protein modification process

membrane

integral to membrane

acid-amino acid ligase activity

modification-dependent protein catabolic process

 
226098_at 0.297 6.606 2.641 1.835e-02 0.422 -3.171 IFT80 intraflagellar transport 80 homolog (Chlamydomonas) 3 -161457481 AB037795 3q25.33 Hs.478095 7

cytoplasm

 
226032_at 0.305 6.601 2.641 1.837e-02 0.422 -3.171 CASP2 caspase 2, apoptosis-related cysteine peptidase 7 142695523 AU153405 7q34-q35 Hs.368982 83

cysteine-type endopeptidase activity

cellular_component

intracellular

proteolysis

peptidase activity

enzyme binding

protein domain specific binding

identical protein binding

regulation of apoptosis

protein maturation by peptide bond cleavage

 
205752_s_at 0.290 5.874 2.640 1.839e-02 0.422 -3.173 GSTM5 glutathione S-transferase mu 5 1 110056386 NM_000851 1p13.3 Hs.75652 15

glutathione transferase activity

cytoplasm

metabolic process

transferase activity

Glutathione metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

202372_at -0.256 6.772 -2.640 1.839e-02 0.422 -3.173 RAB3GAP2 RAB3 GTPase activating protein subunit 2 (non-catalytic) 1 -218388232 BF240652 1q41 Hs.654849 Hs.708165 14

GTPase activator activity

protein binding

soluble fraction

cytoplasm

intracellular protein transport

regulation of GTPase activity

protein heterodimerization activity

 
219144_at -0.564 9.919 -2.640 1.840e-02 0.422 -3.173 DUSP26 dual specificity phosphatase 26 (putative) 8 -33568392 NM_024025 8p12 Hs.8719 6

protein tyrosine phosphatase activity

nucleus

cytoplasm

Golgi apparatus

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

 
235496_at 0.418 6.309 2.640 1.840e-02 0.422 -3.173 HRCT1 histidine rich carboxyl terminus 1 9 35896188 AI521254 9p13.3 Hs.709734 1

membrane

integral to membrane

 
210613_s_at -0.263 7.987 -2.640 1.840e-02 0.422 -3.173 SYNGR1 synaptogyrin 1 22 38075899, 38075899, 38090120 BC000731 22q13.1 Hs.216226 13

integral to plasma membrane

membrane

cell junction

melanosome

synapse

 
1555719_a_at 0.380 3.147 2.640 1.841e-02 0.422 -3.174 C3orf15 chromosome 3 open reading frame 15 3 120904558 AB063298 3q12-q13.3 Hs.341906 8

protein binding

cytoplasm

mitochondrion

 
212829_at 0.268 5.744 2.639 1.842e-02 0.422 -3.174 PIP4K2A phosphatidylinositol-5-phosphate 4-kinase, type II, alpha 10 -22863771 BE878277 10p12.2 Hs.57079 24

nucleotide binding

ATP binding

cellular_component

kinase activity

1-phosphatidylinositol-4-phosphate 5-kinase activity

1-phosphatidylinositol-5-phosphate 4-kinase activity

phosphorylation

transferase activity

phosphatidylinositol metabolic process

Inositol phosphate metabolism

Phosphatidylinositol signaling system

Regulation of actin cytoskeleton

226024_at 0.250 8.761 2.639 1.842e-02 0.422 -3.174 COMMD1 copper metabolism (Murr1) domain containing 1 2 61986306 BG481459 2p15 Hs.468702 28

nucleus

cytoplasm

identical protein binding

 
235069_at -0.499 5.672 -2.639 1.842e-02 0.422 -3.174 TATDN3 TatD DNase domain containing 3 1 211031792 AL525367 1q32.3 Hs.530538 3

nuclease activity

nucleus

hydrolase activity

endodeoxyribonuclease activity, producing 5'-phosphomonoesters

 
202779_s_at -0.611 5.832 -2.639 1.844e-02 0.422 -3.175 UBE2S ubiquitin-conjugating enzyme E2S 19 -60604461 NM_014501 19q13.43 Hs.396393 6

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

224664_at -0.239 10.834 -2.638 1.845e-02 0.422 -3.176 C10orf104 chromosome 10 open reading frame 104 10 73645811 BE962336 10q22.1 Hs.426296 5    
235634_at 0.265 5.179 2.638 1.846e-02 0.422 -3.176 PURG purine-rich element binding protein G 8 -31007898, -30972862 BE503391 8p11 Hs.373778 3

DNA binding

nucleus

 
237378_at 0.220 5.706 2.638 1.847e-02 0.422 -3.177 FLJ46321 FAM75-like protein FLJ46321 9 83793506 AL040781 9q21.32 Hs.209545  

membrane

integral to membrane

 
213597_s_at 0.188 2.947 2.637 1.851e-02 0.422 -3.178 CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like 3 37878672 BF002474 3p21.3 Hs.475963 18

molecular_function

phosphoprotein phosphatase activity

cellular_component

nucleus

biological_process

hydrolase activity

 
205600_x_at 0.327 5.285 2.637 1.852e-02 0.422 -3.179 HOXB5 homeobox B5 17 -44023617 AI052747 17q21.3 Hs.654456 25

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anatomical structure morphogenesis

anterior/posterior pattern formation

sequence-specific DNA binding

endothelial cell differentiation

embryonic skeletal system morphogenesis

 
1555548_at 0.265 4.621 2.636 1.853e-02 0.422 -3.179 NDUFA10 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa 2 -240548828 AF453834 2q37.3 Hs.277677 11

ATP binding

mitochondrion

mitochondrial respiratory chain complex I

mitochondrial matrix

mitochondrial electron transport, NADH to ubiquinone

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

transport

NADH dehydrogenase (ubiquinone) activity

phosphotransferase activity, alcohol group as acceptor

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

206314_at 0.310 4.170 2.636 1.854e-02 0.422 -3.180 ZNF167 zinc finger protein 167 3 44571716, 44571716 NM_018651 3p22.3-p21.1 Hs.529512 Hs.696570 7

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
219653_at 0.239 5.830 2.635 1.857e-02 0.422 -3.181 LSM14B LSM14B, SCD6 homolog B (S. cerevisiae) 20 60130911 NM_014054 20q13.33 Hs.105379 5    
228306_at 0.360 6.755 2.635 1.858e-02 0.422 -3.181 CNIH4 cornichon homolog 4 (Drosophila) 1 222611217 T87074 1q42.11 Hs.195403 Hs.445890 11

protein binding

endoplasmic reticulum

intracellular signaling cascade

membrane

integral to membrane

 
222242_s_at 0.212 4.443 2.635 1.858e-02 0.422 -3.181 KLK5 kallikrein-related peptidase 5 19 -56138370 AF243527 19q13.3-q13.4 Hs.50915 37

serine-type endopeptidase activity

serine-type endopeptidase activity

extracellular region

extracellular space

proteolysis

peptidase activity

epidermis development

positive regulation of G-protein coupled receptor protein signaling pathway

 
220170_at -0.485 4.394 -2.635 1.859e-02 0.422 -3.182 FHL5 four and a half LIM domains 5 6 97117155 NM_020482 6q16.1-q16.3 Hs.632608 18

transcription coactivator activity

nucleus

zinc ion binding

metal ion binding

 
238848_at -0.295 3.418 -2.635 1.860e-02 0.422 -3.182 OTUD4 OTU domain containing 4 4 -146299738, -146274251 BF750565 4q31.21 Hs.270851 13

molecular_function

protein binding

cellular_component

biological_process

 
200719_at -0.417 8.289 -2.634 1.861e-02 0.422 -3.183 SKP1 S-phase kinase-associated protein 1 5 -133519980 BE964043 5q31 Hs.171626 Hs.710433 63

protein binding

nucleoplasm

cytosol

ubiquitin-dependent protein catabolic process

SCF ubiquitin ligase complex

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

Wnt signaling pathway

TGF-beta signaling pathway

237202_at 0.222 6.705 2.633 1.865e-02 0.423 -3.185 PGPEP1 pyroglutamyl-peptidase I 19 18312407 AI810572 19p13.11 Hs.131776 8

cytoplasm

proteolysis

peptidase activity

cysteine-type peptidase activity

 
225728_at 0.643 5.013 2.633 1.865e-02 0.423 -3.185 SORBS2 sorbin and SH3 domain containing 2 4 -186743592, -186743592, -186743592, -186743592, -186743592, -186743591, -186743591 AI659533 4q35.1 Hs.619806 Hs.655143 30

structural constituent of cytoskeleton

protein binding

nucleus

cytoplasm

cytoskeletal adaptor activity

biological_process

structural constituent of muscle

actin cytoskeleton

Z disc

perinuclear region of cytoplasm

 
1568702_a_at 0.289 6.598 2.632 1.868e-02 0.423 -3.186 PAAF1 proteasomal ATPase-associated factor 1 11 73265680 AI131457 11q13.4 Hs.525017 9

protein binding

cytosol

protein complex

interspecies interaction between organisms

 
224884_at -0.499 6.762 -2.632 1.869e-02 0.423 -3.187 AKAP13 A kinase (PRKA) anchor protein 13 15 83724874, 84021271 AW575773 15q24-q25 Hs.459211 Hs.710656 38

cAMP-dependent protein kinase activity

signal transducer activity

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

protein binding

cellular_component

intracellular

membrane fraction

nucleus

cytoplasm

intracellular signaling cascade

biological_process

zinc ion binding

membrane

diacylglycerol binding

regulation of Rho protein signal transduction

metal ion binding

 
225098_at 0.270 7.617 2.631 1.873e-02 0.424 -3.189 ABI2 abl-interactor 2 2 203901247 BF245400 2q33 Hs.471156 22

DNA binding

SH3/SH2 adaptor activity

cytoplasm

cytoplasm

cytosol

cytoskeleton

cell motion

cytoskeleton organization

cytoskeletal adaptor activity

actin polymerization or depolymerization

cell migration

SH3 domain binding

peptidyl-tyrosine phosphorylation

kinase binding

lamellipodium

filopodium

Regulation of actin cytoskeleton

219442_at 0.228 5.861 2.631 1.874e-02 0.424 -3.189 C16orf67 chromosome 16 open reading frame 67 16 31619434 NM_024048 16p11.2   4    
227391_x_at 0.228 7.568 2.630 1.878e-02 0.425 -3.191 LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 2 238200962, 238265545, 238265545 BE674143 2q37.3 Hs.471779 16

DNA binding

double-stranded RNA binding

protein binding

nucleus

cytoplasm

cytoskeleton

regulation of transcription from RNA polymerase II promoter

negative regulation of transcription

transcription repressor activity

 
212250_at -0.430 7.994 -2.628 1.884e-02 0.426 -3.194 MTDH metadherin 8 98725582 AV700332 8q22.1 Hs.377155 23

negative regulation of transcription from RNA polymerase II promoter

protein binding

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

tight junction

membrane

integral to membrane

cell junction

nuclear membrane

perinuclear region of cytoplasm

NF-kappaB binding

positive regulation of NF-kappaB transcription factor activity

 
244070_at -0.270 4.630 -2.628 1.885e-02 0.426 -3.195 SYNE1 spectrin repeat containing, nuclear envelope 1 6 -152484514, -152484514, -152484514, -152484514 AW300380 6q25 Hs.12967 29

actin binding

lamin binding

nucleus

nuclear envelope

cytoplasm

Golgi apparatus

cytoskeleton

nucleus organization

Golgi organization

cell death

integral to membrane

sarcomere

muscle cell differentiation

postsynaptic membrane

 
209362_at -0.419 7.983 -2.628 1.886e-02 0.426 -3.195 MED21 mediator complex subunit 21 12 27066749 AI688580 12p11.23 Hs.286145 27

blastocyst development

RNA polymerase II transcription factor activity

transcription coactivator activity

DNA-directed RNA polymerase activity

protein binding

nucleus

DNA-directed RNA polymerase II, core complex

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

 
226989_at -0.829 7.030 -2.628 1.886e-02 0.426 -3.195 RGMB RGM domain family, member B 5 98132898 BE855765 5q15 Hs.526902 5

ER-Golgi intermediate compartment

plasma membrane

cell adhesion

signal transduction

BMP signaling pathway

identical protein binding

positive regulation of transcription

anchored to plasma membrane

 
225465_at 0.396 7.216 2.627 1.888e-02 0.426 -3.196 MAGI1 membrane associated guanylate kinase, WW and PDZ domain containing 1 3 -65319983, -65314945 AK023358 3p14.1 Hs.651939 24

nucleotide binding

ATP binding

plasma membrane

cell-cell junction

tight junction

protein complex assembly

cell adhesion

cell surface receptor linked signal transduction

protein C-terminus binding

Tight junction

224952_at 0.291 4.534 2.627 1.890e-02 0.426 -3.196 TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 17 58440629 BF115054 17q23.2-q23.3 Hs.410889 3

binding

 
200605_s_at -0.531 9.785 -2.626 1.891e-02 0.426 -3.197 PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) 17 64019704, 64020137 NM_002734 17q23-q24 Hs.280342 106

nucleotide binding

mesoderm formation

regulation of protein amino acid phosphorylation

protein binding

cAMP-dependent protein kinase complex

regulation of transcription from RNA polymerase II promoter

cAMP-dependent protein kinase regulator activity

hormone-mediated signaling

cAMP binding

neuromuscular junction

Apoptosis

Insulin signaling pathway

236635_at 0.536 4.890 2.626 1.891e-02 0.426 -3.197 ZNF667 zinc finger protein 667 19 -61643017 AI332774 19q13.43 Hs.712574 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
223652_at 0.571 6.104 2.626 1.892e-02 0.426 -3.198 AS3MT arsenic (+3 oxidation state) methyltransferase 10 104619199 AF226730 10q24.32 Hs.34492 24

soluble fraction

cytoplasm

cytosol

metabolic process

methyltransferase activity

toxin metabolic process

transferase activity

arsonoacetate metabolic process

arsenite methyltransferase activity

methylarsonite methyltransferase activity

response to arsenic

 
226541_at -0.347 6.966 -2.626 1.892e-02 0.426 -3.198 FBXO30 F-box protein 30 6 -146160964 AI808182 6q24 Hs.421095 8

zinc ion binding

modification-dependent protein catabolic process

metal ion binding

 
205406_s_at 0.224 3.728 2.625 1.896e-02 0.427 -3.199 SPA17 sperm autoantigenic protein 17 11 124048949 NM_017425 11q24.2 Hs.286233 19

signal transduction

spermatogenesis

single fertilization

binding of sperm to zona pellucida

cAMP-dependent protein kinase regulator activity

membrane

 
208204_s_at -0.560 9.284 -2.624 1.899e-02 0.427 -3.201 CAV3 caveolin 3 3 8750495 NM_001234 3p25 Hs.98303 73

membrane fraction

Golgi apparatus

caveola

triglyceride metabolic process

elevation of cytosolic calcium ion concentration

muscle organ development

protein C-terminus binding

protein localization

negative regulation of cardiac muscle hypertrophy

regulation of skeletal muscle contraction

dystrophin-associated glycoprotein complex

integral to membrane

cell growth

sodium channel regulator activity

Z disc

cell differentiation

T-tubule

positive regulation of microtubule polymerization

membrane raft organization

neuromuscular junction

protein complex binding

protein complex scaffold

T-tubule organization

regulation of membrane potential

glucose homeostasis

cholesterol homeostasis

negative regulation of MAP kinase activity

negative regulation of MAPKKK cascade

negative regulation of cell size

muscle maintenance

negative regulation of nitric-oxide synthase activity

regulation of calcium ion transport via voltage-gated calcium channel activity

negative regulation of sarcomere organization

regulation of ventricular cardiomyocyte membrane repolarization

Focal adhesion

218534_s_at -0.391 6.554 -2.624 1.901e-02 0.427 -3.202 AGGF1 angiogenic factor with G patch and FHA domains 1 5 76361987 NM_018046 5q13.3 Hs.634849 12

vasculogenesis

positive regulation of endothelial cell proliferation

nucleic acid binding

protein binding

extracellular region

intracellular

cytoplasm

RNA processing

cell adhesion

multicellular organismal development

eukaryotic cell surface binding

positive regulation of angiogenesis

perinuclear region of cytoplasm

 
210106_at -0.267 6.762 -2.624 1.901e-02 0.427 -3.202 RDH5 retinol dehydrogenase 5 (11-cis/9-cis) 12 54400417 U43559 12q13-q14 Hs.600940 28

retinol dehydrogenase activity

binding

endoplasmic reticulum lumen

visual perception

membrane

oxidoreductase activity

response to stimulus

oxidation reduction

Retinol metabolism

203004_s_at -0.205 6.401 -2.623 1.901e-02 0.427 -3.202 MEF2D myocyte enhancer factor 2D 1 -154700142 NM_005920 1q12-q23 Hs.314327 35

transcription factor activity

nucleus

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

apoptosis

multicellular organismal development

nervous system development

muscle organ development

cell differentiation

sequence-specific DNA binding

 
206584_at 0.546 3.717 2.623 1.902e-02 0.427 -3.202 LY96 lymphocyte antigen 96 8 75066140 NM_015364 8q21.11 Hs.660766 65

lipopolysaccharide receptor activity

protein binding

extracellular region

extracellular space

plasma membrane

plasma membrane

inflammatory response

immune response

cellular defense response

cell surface receptor linked signal transduction

I-kappaB kinase/NF-kappaB cascade

coreceptor activity

detection of lipopolysaccharide

lipopolysaccharide receptor complex

Toll-like receptor signaling pathway

Pathogenic Escherichia coli infection - EHEC

201764_at 0.323 7.300 2.623 1.903e-02 0.427 -3.203 TMEM106C transmembrane protein 106C 12 46643596 NM_024056 12q13.1 Hs.596726 5

molecular_function

cellular_component

endoplasmic reticulum

biological_process

membrane

integral to membrane

 
1561892_at -0.228 2.713 -2.623 1.904e-02 0.427 -3.203 ZMYM6 zinc finger, MYM-type 6 1 -35224353 BC043174 1p34.2 Hs.533986 Hs.623978 Hs.675613 8

DNA binding

nucleus

nucleolus

multicellular organismal development

zinc ion binding

metal ion binding

 
221841_s_at -1.033 7.092 -2.622 1.906e-02 0.428 -3.204 KLF4 Kruppel-like factor 4 (gut) 9 -109286953 BF514079 9q31 Hs.376206 66

transcription factor activity

intracellular

nucleus

nucleolus

mesodermal cell fate determination

zinc ion binding

negative regulation of cell proliferation

transcription activator activity

transcription repressor activity

regulation of transcription

negative regulation of transcription, DNA-dependent

metal ion binding

 
220184_at 0.429 4.792 2.621 1.910e-02 0.428 -3.206 NANOG Nanog homeobox 12 7833261 NM_024865 12p13.31 Hs.661360 42

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

cell proliferation

embryonic development

sequence-specific DNA binding

regulation of cell differentiation

 
224937_at 0.581 4.284 2.620 1.913e-02 0.429 -3.207 PTGFRN prostaglandin F2 receptor negative regulator 1 117254211 BF311866 1p13.1 Hs.418093 14

protein binding

endoplasmic reticulum

Golgi apparatus

membrane

integral to membrane

 
1554380_at -0.196 4.998 -2.620 1.913e-02 0.429 -3.207 NEK11 NIMA (never in mitosis gene a)- related kinase 11 3 132228383, 132228383 AB071997 3q22.1 Hs.657336 8

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

ATP binding

nucleus

nucleolus

protein amino acid phosphorylation

cell cycle

protein kinase cascade

transferase activity

manganese ion binding

intra-S DNA damage checkpoint

identical protein binding

 
212758_s_at -0.479 8.044 -2.620 1.915e-02 0.429 -3.208 ZEB1 zinc finger E-box binding homeobox 1 10 31647429, 31647717, 31647752, 31648106, 31650069 AI373166 10p11.2 Hs.124503 52

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

transcription coactivator activity

transcription corepressor activity

intracellular

nucleus

immune response

zinc ion binding

cell proliferation

sequence-specific DNA binding

metal ion binding

 
238929_at -0.296 5.174 -2.620 1.916e-02 0.429 -3.209 SFRS2B splicing factor, arginine/serine-rich 2B 11 94439703 N30132 11q22 Hs.476680 Hs.713908 6

nucleotide binding

RNA binding

nucleus

mRNA processing

RNA splicing

 
203557_s_at 0.349 7.550 2.619 1.918e-02 0.429 -3.209 PCBD1 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha 10 -72313272 NM_000281 10q22 Hs.3192 28

transcription coactivator activity

phenylalanine 4-monooxygenase activity

nucleus

cytoplasm

tetrahydrobiopterin biosynthetic process

4-alpha-hydroxytetrahydrobiopterin dehydratase activity

lyase activity

identical protein binding

regulation of protein homodimerization activity

positive regulation of transcription

protein homotetramerization

protein heterooligomerization

 
219565_at -0.304 5.331 -2.618 1.922e-02 0.429 -3.211 CYP20A1 cytochrome P450, family 20, subfamily A, polypeptide 1 2 203811408 NM_020674 2q33.2 Hs.446065 Hs.707756 7

monooxygenase activity

electron carrier activity

membrane

integral to membrane

heme binding

metal ion binding

oxidation reduction

 
1557430_at 0.363 3.019 2.618 1.922e-02 0.429 -3.212 LOC147670 hypothetical protein LOC147670 19   BG910569 19q13.43 Hs.336588 1    
222542_x_at -0.657 6.701 -2.618 1.923e-02 0.429 -3.212 CABC1 chaperone, ABC1 activity of bc1 complex homolog (S. pombe) 1 225194560 BF724826 1q42.13 Hs.118241 10

nucleotide binding

ATP binding

mitochondrion

cell death

kinase activity

transferase activity

 
214526_x_at 0.319 6.215 2.618 1.924e-02 0.429 -3.212 PMS2L1 postmeiotic segregation increased 2-like 1 pseudogene 7 -99756198 NM_005394 7q22.1 Hs.634244 Hs.661055 Hs.709266 7

molecular_function

ATP binding

cellular_component

mismatch repair

biological_process

kinase activity

transferase activity

mismatched DNA binding

 
232892_at 0.366 9.816 2.617 1.924e-02 0.429 -3.213 C20orf166 chromosome 20 open reading frame 166 20 60558104 AL449263 20q13.33 Hs.86507 5    
1554469_at 0.313 4.351 2.617 1.924e-02 0.429 -3.213 ZBTB44 zinc finger and BTB domain containing 44 11 -129601783 BC030580 11q24.3 Hs.719099 7

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
203457_at -0.276 5.895 -2.617 1.927e-02 0.429 -3.214 STX7 syntaxin 7 6 -132820355 NM_003569 6q23.1 Hs.593148 Hs.605992 31

SNAP receptor activity

endosome

Golgi apparatus

intracellular protein transport

post-Golgi vesicle-mediated transport

membrane

integral to membrane

vesicle-mediated transport

SNARE interactions in vesicular transport

1554660_a_at -0.457 3.918 -2.617 1.928e-02 0.429 -3.214 C1orf71 chromosome 1 open reading frame 71 1 244796261, 244796261 BC036200 1q44 Hs.368353 9

membrane

integral to membrane

protein complex

 
209283_at 0.311 12.678 2.615 1.933e-02 0.430 -3.216 CRYAB crystallin, alpha B 11 -111284559 AF007162 11q22.3-q23.1 Hs.408767 143

structural constituent of eye lens

soluble fraction

insoluble fraction

cytoplasm

plasma membrane

protein folding

anti-apoptosis

muscle contraction

muscle organ development

response to heat

Z disc

negative regulation of intracellular transport

camera-type eye development

contractile fiber

unfolded protein binding

protein homooligomerization

 
203090_at -0.200 6.966 -2.614 1.937e-02 0.431 -3.218 SDF2 stromal cell-derived factor 2 17 -23999733 NM_006923 17q11.2 Hs.514036 5

dolichyl-phosphate-mannose-protein mannosyltransferase activity

extracellular region

extracellular space

protein amino acid glycosylation

membrane

 
228718_at 0.355 5.727 2.612 1.946e-02 0.432 -3.222 ZNF44 zinc finger protein 44 19 -12243624 AI379070 19p13.2 Hs.296731 Hs.693933 10

DNA binding

protein binding

intracellular

nucleus

cytoplasm

cytoskeleton

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
212470_at -0.327 8.166 -2.612 1.947e-02 0.432 -3.223 SPAG9 sperm associated antigen 9 17 -46394534 AB011088 17q21.33 Hs.463439 22

acrosomal vesicle

protein binding

cytoplasm

spermatogenesis

integral to membrane

positive regulation of cell migration

perinuclear region of cytoplasm

 
219428_s_at 0.204 6.736 2.612 1.947e-02 0.432 -3.223 PXMP4 peroxisomal membrane protein 4, 24kDa 20 -31754210 BF057649 20q11.22 Hs.654857 8

membrane fraction

peroxisome

peroxisomal membrane

membrane

integral to membrane

 
212345_s_at 0.341 6.941 2.611 1.948e-02 0.432 -3.223 CREB3L2 cAMP responsive element binding protein 3-like 2 7 -137210264 BE675139 7q34 Hs.719234 8

transcription factor activity

nucleus

endoplasmic reticulum

regulation of transcription, DNA-dependent

response to unfolded protein

membrane

integral to membrane

sequence-specific DNA binding

protein dimerization activity

Melanogenesis

Huntington's disease

Prostate cancer

216525_x_at 0.270 6.741 2.611 1.949e-02 0.432 -3.224 PMS2L3 postmeiotic segregation increased 2-like 3 7 -74975005, -74975004 D38437 7q11.23 Hs.406395 Hs.659871 Hs.661055 4

molecular_function

nucleic acid binding

ATP binding

cellular_component

intracellular

regulation of transcription, DNA-dependent

biological_process

 
242172_at 0.278 4.372 2.611 1.949e-02 0.432 -3.224 MEIS1 Meis homeobox 1 2 66516035 N50406 2p14-p13 Hs.526754 Hs.603755 42

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

sequence-specific DNA binding

 
215073_s_at 0.329 5.897 2.611 1.951e-02 0.432 -3.225 NR2F2 nuclear receptor subfamily 2, group F, member 2 15 94670160, 94675114, 94676797, 94677572 AL554245 15q26 Hs.657455 27

transcription factor activity

ligand-regulated transcription factor activity

steroid hormone receptor activity

transcription corepressor activity

nucleus

regulation of transcription from RNA polymerase II promoter

lipid metabolic process

signal transduction

zinc ion binding

sequence-specific DNA binding

metal ion binding

 
224250_s_at -0.388 7.930 -2.610 1.955e-02 0.432 -3.226 SECISBP2 SECIS binding protein 2 9 91123231 BC001189 9q22.2 Hs.59804 20

RNA binding

mRNA 3'-UTR binding

nucleus

translation

 
1553860_at 0.249 4.564 2.609 1.958e-02 0.433 -3.228 DCST1 DC-STAMP domain containing 1 1 153272923 NM_152494 1q22 Hs.567717 2

protein binding

zinc ion binding

membrane

integral to membrane

metal ion binding

 
227424_x_at -0.316 6.524 -2.609 1.959e-02 0.433 -3.228 C21orf119 chromosome 21 open reading frame 119 21 32687312 AI800837 21q22.11 Hs.58149 2    
1567247_at -0.301 2.562 -2.608 1.961e-02 0.433 -3.229 OR5H1 olfactory receptor, family 5, subfamily H, member 1 3 99334231 X64988 3q11.2 Hs.537383 1

receptor activity

olfactory receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

sensory perception of smell

integral to membrane

response to stimulus

 
224818_at -0.320 8.719 -2.608 1.962e-02 0.433 -3.230 SORT1 sortilin 1 1 -109653714 BE622952 1p21.3-p13.1 Hs.485195 Hs.703487 47

ossification

receptor activity

nucleus

lysosome

early endosome

endoplasmic reticulum

microsome

Golgi apparatus

plasma membrane

coated pit

transport

Golgi to endosome transport

endocytosis

neuropeptide signaling pathway

multicellular organismal development

endosome to lysosome transport

induction of apoptosis by extracellular signals

cell surface

nerve growth factor receptor activity

regulation of gene expression

myotube differentiation

integral to membrane

cytoplasmic membrane-bounded vesicle

vesicle organization

enzyme binding

clathrin-coated vesicle

cell differentiation

neurotensin receptor activity, non-G-protein coupled

endosome transport via multivesicular body sorting pathway

response to insulin stimulus

negative regulation of apoptosis

glucose import

nerve growth factor receptor signaling pathway

plasma membrane to endosome transport

nerve growth factor binding

perinuclear region of cytoplasm

negative regulation of lipoprotein lipase activity

Lysosome

Neurotrophin signaling pathway

221290_s_at 0.357 4.448 2.608 1.963e-02 0.433 -3.230 MUM1 melanoma associated antigen (mutated) 1 19 1305975, 1307322 NM_016473 19p13.3 Hs.515016 6    
217799_x_at -0.297 7.183 -2.607 1.964e-02 0.433 -3.230 UBE2H ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) 7 -129260230 NM_003344 7q32 Hs.643548 16

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ubiquitin-dependent protein catabolic process

protein ubiquitination

ligase activity

regulation of protein metabolic process

Ubiquitin mediated proteolysis

214829_at 0.540 5.483 2.607 1.966e-02 0.434 -3.231 AASS aminoadipate-semialdehyde synthase 7 -121500835 AK023446 7q31.3 Hs.156738 10

binding

mitochondrion

electron carrier activity

oxidoreductase activity

L-lysine catabolic process

saccharopine dehydrogenase (NADP+, L-lysine-forming) activity

saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity

protein tetramerization

oxidation reduction

Lysine biosynthesis

Lysine degradation

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Metabolic pathways

225171_at -0.322 7.098 -2.606 1.968e-02 0.434 -3.232 ARHGAP18 Rho GTPase activating protein 18 6 -129939932 BE644830 6q22.33 Hs.486458 Hs.708586 7

GTPase activator activity

protein binding

intracellular

signal transduction

 
212502_at -0.351 7.500 -2.606 1.968e-02 0.434 -3.232 ADO 2-aminoethanethiol (cysteamine) dioxygenase 10 64234521 AV713053 10q21.3 Hs.99821 4

iron ion binding

oxidoreductase activity

metal ion binding

cysteamine dioxygenase activity

oxidation reduction

Taurine and hypotaurine metabolism

Metabolic pathways

222954_at -0.370 9.457 -2.606 1.969e-02 0.434 -3.233 FBXO40 F-box protein 40 3 122794859 AF204674 3q13.33 Hs.272564 7

molecular_function

cellular_component

biological_process

zinc ion binding

modification-dependent protein catabolic process

metal ion binding

 
201204_s_at 0.401 6.224 2.606 1.970e-02 0.434 -3.233 RRBP1 ribosome binding protein 1 homolog 180kDa (dog) 20 -17542322 AA706065 20p12 Hs.472213 19

receptor activity

endoplasmic reticulum

ribosome

translation

signal transduction

protein transport

membrane

integral to membrane

integral to endoplasmic reticulum membrane

intracellular protein transmembrane transport

 
208190_s_at 0.349 5.410 2.604 1.975e-02 0.435 -3.236 LSR lipolysis stimulated lipoprotein receptor 19 40431398 NM_015925 19q13.12 Hs.466507 11

liver development

receptor activity

nucleus

nucleolus

cytoplasm

Golgi apparatus

plasma membrane

embryonic development

integral to membrane

very-low-density lipoprotein particle

low-density lipoprotein particle

chylomicron

 
211071_s_at 0.786 8.059 2.604 1.977e-02 0.435 -3.236 MLLT11 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11 1 149298774 BC006471 1q21 Hs.75823 9

molecular_function

cellular_component

 
202309_at 0.279 8.723 2.604 1.977e-02 0.435 -3.237 MTHFD1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase 14 63924511 NM_005956 14q24 Hs.652308 68

histidine biosynthetic process

nucleotide binding

formate-tetrahydrofolate ligase activity

methenyltetrahydrofolate cyclohydrolase activity

methylenetetrahydrofolate dehydrogenase (NADP+) activity

protein binding

ATP binding

cytoplasm

mitochondrion

purine nucleotide biosynthetic process

histidine catabolic process

one-carbon metabolic process

cellular amino acid biosynthetic process

methionine biosynthetic process

folic acid and derivative biosynthetic process

formyltetrahydrofolate dehydrogenase activity

oxidoreductase activity

hydrolase activity

ligase activity

oxidation reduction

Glyoxylate and dicarboxylate metabolism

One carbon pool by folate

Metabolic pathways

219975_x_at 0.222 2.435 2.603 1.981e-02 0.435 -3.238 OLAH oleoyl-ACP hydrolase 10 15125900 NM_018324 10p13 Hs.24309 4

oleoyl-[acyl-carrier-protein] hydrolase activity

fatty acid biosynthetic process

hydrolase activity, acting on ester bonds

Fatty acid biosynthesis

Metabolic pathways

1552266_at -0.198 2.725 -2.602 1.985e-02 0.436 -3.240 ADAM32 ADAM metallopeptidase domain 32 8 39084206 NM_145004 8p11.22 Hs.521545 6

metalloendopeptidase activity

proteolysis

zinc ion binding

membrane

integral to membrane

 
217234_s_at 0.320 4.581 2.601 1.989e-02 0.436 -3.242 EZR ezrin 6 -159106760, -159106760 AF199015 6q25.2-q26 Hs.487027 158

ruffle

cytoplasm

cytosol

actin filament

plasma membrane

microvillus

cell cortex

cytoskeletal anchoring at plasma membrane

leukocyte adhesion

cytoskeletal protein binding

regulation of cell shape

extrinsic to membrane

membrane to membrane docking

filopodium

cortical cytoskeleton

apical part of cell

cell adhesion molecule binding

actin filament binding

actin filament bundle formation

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Pathogenic Escherichia coli infection - EHEC

223567_at 0.222 3.275 2.601 1.990e-02 0.436 -3.242 SEMA6B sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B 19 -4493599 AB022433 19p13.3 Hs.465642 4

receptor activity

multicellular organismal development

nervous system development

membrane

integral to membrane

cell differentiation

Axon guidance

202847_at 0.682 4.676 2.601 1.990e-02 0.436 -3.242 PCK2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) 14 23633322, 23633322 NM_004563 14q11.2 Hs.75812 9

phosphoenolpyruvate carboxykinase (GTP) activity

GTP binding

mitochondrion

gluconeogenesis

lyase activity

purine nucleotide binding

manganese ion binding

metal ion binding

Glycolysis / Gluconeogenesis

Citrate cycle (TCA cycle)

Pyruvate metabolism

Metabolic pathways

PPAR signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

219714_s_at 0.584 5.935 2.600 1.991e-02 0.436 -3.243 CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 3 54131732 NM_018398 3p21.1 Hs.656687 9

voltage-gated ion channel activity

calcium channel activity

calcium ion binding

ion transport

calcium ion transport

membrane

integral to membrane

MAPK signaling pathway

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

201366_at -0.355 9.200 -2.600 1.994e-02 0.436 -3.244 ANXA7 annexin A7 10 -74805194 NM_004034 10q21.1-q21.2 Hs.631827 24

calcium ion binding

calcium-dependent phospholipid binding

calcium-dependent protein binding

 
205488_at 0.291 3.903 2.598 2.000e-02 0.437 -3.247 GZMA granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3) 5 54434230 NM_006144 5q11-q12 Hs.90708 39

immunological synapse

serine-type endopeptidase activity

extracellular region

nucleus

proteolysis

apoptosis

cleavage of lamin

immune response

peptidase activity

cytolysis

protein homodimerization activity

Neuroactive ligand-receptor interaction

218552_at 0.343 8.683 2.598 2.001e-02 0.437 -3.247 ECHDC2 enoyl Coenzyme A hydratase domain containing 2 1 -53134491 NM_018281 1p32.3 Hs.476319 2

mitochondrion

lipid metabolic process

fatty acid metabolic process

metabolic process

lyase activity

 
205030_at 1.776 6.423 2.598 2.001e-02 0.437 -3.247 FABP7 fatty acid binding protein 7, brain 6 123142344 NM_001446 6q22-q23 Hs.26770 28

transporter activity

cytoplasm

transport

nervous system development

negative regulation of cell proliferation

lipid binding

PPAR signaling pathway

205249_at -0.293 3.235 -2.598 2.002e-02 0.437 -3.247 EGR2 early growth response 2 10 -64241765, -64241765 NM_000399 10q21.1 Hs.1395 41

transcription factor activity

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

learning or memory

rhythmic behavior

motor axon guidance

zinc ion binding

Schwann cell differentiation

rhombomere 3 development

facial nerve structural organization

rhombomere 3 formation

rhombomere 5 formation

regulation of ossification

response to insulin stimulus

brain segmentation

myelination

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

regulation of neuronal synaptic plasticity

 
1553106_at -0.439 2.812 -2.597 2.005e-02 0.438 -3.249 C5orf24 chromosome 5 open reading frame 24 5 134209268, 134209556 NM_152409 5q31.1 Hs.406549 3    
226065_at 0.349 6.761 2.596 2.009e-02 0.438 -3.251 PRICKLE1 prickle homolog 1 (Drosophila) 12 -41138407, -41138407, -41138407 N98595 12q12 Hs.524348 Hs.639400 14

nucleus

cytoplasm

cytosol

zinc ion binding

membrane

nuclear membrane

metal ion binding

Wnt signaling pathway

226305_at 0.263 6.153 2.596 2.010e-02 0.438 -3.251 LYNX1 Ly6/neurotoxin 1 8 -143849616, -143849616, -143849616, -143842759, -143842757 AV696976 8q24.3 Hs.158665 Hs.604828 9

extracellular region

plasma membrane

anchored to membrane

 
205193_at -0.831 5.487 -2.595 2.012e-02 0.438 -3.252 MAFF v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian) 22 36927884, 36928972 NM_012323 22q13.1 Hs.517617 14

in utero embryonic development

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

response to stress

parturition

sequence-specific DNA binding

regulation of epidermal cell differentiation

 
206576_s_at 0.263 6.075 2.595 2.013e-02 0.438 -3.252 CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 19 -47703297 NM_001712 19q13.2 Hs.512682 97

angiogenesis

molecular_function

extracellular region

membrane fraction

plasma membrane

plasma membrane

integral to plasma membrane

homophilic cell adhesion

integrin-mediated signaling pathway

cell migration

 
212878_s_at -0.363 7.919 -2.595 2.015e-02 0.439 -3.253 KLC1 kinesin light chain 1 14 103165277, 103165277 AA284075 14q32.3 Hs.20107 Hs.657678 31

microtubule motor activity

protein binding

cytoplasm

cytosol

kinesin complex

microtubule

axon cargo transport

axon

cytoplasmic vesicle

ciliary rootlet

membrane-bounded organelle

 
206759_at -0.221 3.702 -2.594 2.016e-02 0.439 -3.254 FCER2 Fc fragment of IgE, low affinity II, receptor for (CD23) 19 -7659643 NM_002002 19p13.3 Hs.465778 71

receptor activity

integrin binding

binding

sugar binding

extracellular region

plasma membrane

integral to plasma membrane

IgE binding

positive regulation of nitric-oxide synthase activity

positive regulation of killing of cells of another organism

positive regulation of nitric-oxide synthase 2 biosynthetic process

Hematopoietic cell lineage

227776_at 0.539 5.642 2.594 2.018e-02 0.439 -3.254 ACER3 alkaline ceramidase 3 11 76249564 BF589251 11q13.5 Hs.23862 5

Golgi membrane

endoplasmic reticulum

endoplasmic reticulum membrane

Golgi apparatus

ceramide metabolic process

membrane

integral to membrane

hydrolase activity

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides

Sphingolipid metabolism

210039_s_at -0.448 8.266 -2.594 2.018e-02 0.439 -3.255 PRKCQ protein kinase C, theta 10 -6509110 L01087 10p15 Hs.498570 112

nucleotide binding

magnesium ion binding

regulation of cell growth

protein kinase C activity

protein binding

ATP binding

intracellular

protein amino acid phosphorylation

membrane protein ectodomain proteolysis

intracellular signaling cascade

zinc ion binding

transferase activity

diacylglycerol binding

Vascular smooth muscle contraction

Tight junction

T cell receptor signaling pathway

Adipocytokine signaling pathway

1553540_a_at -0.359 6.009 -2.593 2.022e-02 0.439 -3.256 SLC29A2 solute carrier family 29 (nucleoside transporters), member 2 11 -65886567 NM_001532 11q13 Hs.569017 26

nucleoside transmembrane transporter activity

nucleus

nucleolus

plasma membrane

integral to plasma membrane

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

transport

cell proliferation

nucleoside transport

 
37996_s_at 0.459 6.701 2.592 2.027e-02 0.440 -3.258 DMPK dystrophia myotonica-protein kinase 19 -50964815, -50964815 L08835 19q13.3 Hs.631596 91

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

protein modification process

protein amino acid phosphorylation

regulation of heart contraction

transferase activity

 
55692_at 0.239 7.074 2.591 2.030e-02 0.440 -3.259 ELMO2 engulfment and cell motility 2 20 -44428096 W22924 20q13 Hs.210469 16

binding

cytoplasm

cytoskeleton

phagocytosis

apoptosis

SH3 domain binding

 
227622_at 0.459 8.053 2.590 2.034e-02 0.440 -3.261 PCF11 PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae) 11 82545784 AW118175 11q13 Hs.128959 10

nuclear mRNA splicing, via spliceosome

nucleus

mRNA cleavage factor complex

mRNA cleavage

 
209019_s_at -0.308 10.140 -2.590 2.034e-02 0.440 -3.262 PINK1 PTEN induced putative kinase 1 1 20832534 AF316873 1p36 Hs.389171 105

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

ATP binding

mitochondrion

mitochondrial outer membrane

protein amino acid phosphorylation

response to stress

protein kinase cascade

membrane

integral to membrane

transferase activity

positive regulation of synaptic transmission, dopaminergic

positive regulation of dopamine secretion

Parkinson's disease

211452_x_at 0.337 8.109 2.590 2.035e-02 0.440 -3.262 LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 2 238200962, 238265545, 238265545 AF130054 2q37.3 Hs.471779 16

DNA binding

double-stranded RNA binding

protein binding

nucleus

cytoplasm

cytoskeleton

regulation of transcription from RNA polymerase II promoter

negative regulation of transcription

transcription repressor activity

 
227687_at -0.399 5.901 -2.590 2.035e-02 0.440 -3.262 HYLS1 hydrolethalus syndrome 1 11 125258718, 125262164 AL523264 11q24.2 Hs.585071 7

cytoplasm

 
205843_x_at 0.293 8.314 2.589 2.038e-02 0.440 -3.263 CRAT carnitine acetyltransferase 9 -130896895, -130896893 NM_000755 9q34.1 Hs.12068 10

carnitine O-acetyltransferase activity

mitochondrion

mitochondrial inner membrane

peroxisome

endoplasmic reticulum

lipid metabolic process

fatty acid metabolic process

transport

acyltransferase activity

energy derivation by oxidation of organic compounds

membrane

transferase activity

 
230679_at 0.318 3.507 2.589 2.038e-02 0.440 -3.263 DCAF10 DDB1 and CUL4 associated factor 10 9 37790789 AA976778 9p13.2 Hs.118394 2    
221692_s_at -0.442 9.606 -2.589 2.038e-02 0.440 -3.263 MRPL34 mitochondrial ribosomal protein L34 19 17277476 AB049652 19p13.1 Hs.515242 6

structural constituent of ribosome

intracellular

mitochondrion

mitochondrial large ribosomal subunit

ribosome

translation

translation regulator activity

 
220094_s_at 0.310 8.746 2.589 2.039e-02 0.440 -3.263 CCDC90A coiled-coil domain containing 90A 6 -13898998 NM_022102 6p24.3-p23 Hs.214043 3

mitochondrion

membrane

integral to membrane

 
215211_at 0.290 5.517 2.589 2.039e-02 0.440 -3.264 LOC730092 RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 16 -21715451 AF054994 16p12.2 Hs.31290 Hs.348979 Hs.658149 4    
209454_s_at -0.393 6.300 -2.588 2.040e-02 0.440 -3.264 TEAD3 TEA domain family member 3 6 -35549351 AF142482 6p21.2 Hs.485205 13

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

female pregnancy

 
215691_x_at 0.365 7.146 2.587 2.046e-02 0.441 -3.267 HSPB11 heat shock protein family B (small), member 11 1 -54159821 AV702994 1p32.1-p33 Hs.525462 Hs.624686 9

response to stress

cell adhesion

 
204363_at -0.343 5.513 -2.587 2.047e-02 0.441 -3.267 F3 coagulation factor III (thromboplastin, tissue factor) 1 -94767319 NM_001993 1p22-p21 Hs.62192 257

positive regulation of endothelial cell proliferation

protease binding

activation of plasma proteins involved in acute inflammatory response

activation of blood coagulation via clotting cascade

phospholipid binding

extracellular space

plasma membrane

plasma membrane

anti-apoptosis

activation of caspase activity

blood coagulation, extrinsic pathway

positive regulation of platelet-derived growth factor receptor signaling pathway

integral to membrane

positive regulation of cell migration

extracellular matrix

intrinsic to external side of plasma membrane

cell surface binding

positive regulation of angiogenesis

positive regulation of positive chemotaxis

positive regulation of protein kinase B signaling cascade

Complement and coagulation cascades

227874_at 0.375 7.601 2.587 2.047e-02 0.441 -3.267 EMCN endomucin 4 -101535522 AI635774 4q24 Hs.152913 12

extracellular region

plasma membrane

integral to membrane

 
212372_at 0.681 7.144 2.586 2.048e-02 0.441 -3.267 MYH10 myosin, heavy chain 10, non-muscle 17 -8318254 AK026977 17p13 Hs.16355 37

microfilament motor activity

nucleotide binding

cytokinesis after mitosis

in utero embryonic development

stress fiber

neuron migration

plasma membrane repair

calmodulin binding

ATP binding

cytoplasm

spindle

plasma membrane

cell cortex

exocytosis

substrate-bound cell migration, cell extension

nuclear migration

axon guidance

brain development

adult heart development

biological_process

cell proliferation

regulation of cell shape

myosin complex

fourth ventricle development

lateral ventricle development

third ventricle development

cerebellar Purkinje cell layer development

actin cytoskeleton organization

actin filament-based movement

axon

growth cone

midbody

actin-dependent ATPase activity

neuron projection development

neuromuscular junction

cleavage furrow

cell soma

dendritic spine

ADP binding

neuromuscular process controlling balance

actin filament binding

cardiac myofibril assembly

ventricular cardiac muscle cell development

retina development in camera-type eye

Tight junction

Regulation of actin cytoskeleton

1565329_at 0.379 2.450 2.586 2.048e-02 0.441 -3.268 POLE4 polymerase (DNA-directed), epsilon 4 (p12 subunit) 2 75039282 AY034104 2p12 Hs.469060 5

DNA-directed DNA polymerase activity

protein binding

intracellular

nucleus

transferase activity

nucleotidyltransferase activity

sequence-specific DNA binding

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

DNA replication

Base excision repair

Nucleotide excision repair

212835_at -0.529 6.466 -2.586 2.049e-02 0.441 -3.268 FAM175B family with sequence similarity 175, member B 10 126480343 AA777641 10q26.13 Hs.280695 10

protein binding

polyubiquitin binding

BRISC complex

 
1555314_at 0.245 3.178 2.586 2.051e-02 0.441 -3.269 WDR19 WD repeat domain 19 4 38860418 BC032578 4p14 Hs.438482 8

protein binding

intracellular protein transport

vesicle-mediated transport

 
202459_s_at 0.217 4.693 2.585 2.052e-02 0.441 -3.269 LPIN2 lipin 2 18 -2906991 U55968 18p11.31 Hs.132342 10

nucleus

phosphatidate phosphatase activity

 
222287_at -0.449 11.343 -2.585 2.053e-02 0.441 -3.269 TRDN triadin 6 -123579181 AW969675 6q22-q23 Hs.654601 19

receptor binding

cytoplasm

plasma membrane

muscle contraction

integral to membrane

sarcoplasmic reticulum

 
224966_s_at -0.217 4.780 -2.585 2.053e-02 0.441 -3.270 DUS3L dihydrouridine synthase 3-like (S. cerevisiae) 19 -5736154 AI857915 19p13.3 Hs.284297 5

nucleic acid binding

tRNA processing

zinc ion binding

oxidoreductase activity

tRNA dihydrouridine synthase activity

metal ion binding

FAD binding

oxidation reduction

 
1562703_at 0.252 3.895 2.585 2.054e-02 0.441 -3.270 LOC157381 hypothetical LOC157381 8 126023430 BC033393 8q24.13 Hs.638933 Hs.651593 3    
203588_s_at -0.377 6.335 -2.585 2.055e-02 0.441 -3.270 TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) 3 -143154017 BG034328 3q23 Hs.379018 14

transcription factor activity

transcription cofactor activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

cell cycle

protein domain specific binding

Cell cycle

222235_s_at -0.392 6.103 -2.584 2.056e-02 0.441 -3.271 CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 10 42953939 AL139812 10q11.21 Hs.657569 6

protein binding

Golgi apparatus

membrane

integral to membrane

transferase activity

integral to Golgi membrane

Golgi cisterna membrane

metal ion binding

glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity

dermatan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process

chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process

Chondroitin sulfate biosynthesis

Metabolic pathways

222919_at -0.373 12.085 -2.584 2.056e-02 0.441 -3.271 TRDN triadin 6 -123579181 AA192306 6q22-q23 Hs.654601 19

receptor binding

cytoplasm

plasma membrane

muscle contraction

integral to membrane

sarcoplasmic reticulum

 
206469_x_at 0.234 6.145 2.584 2.057e-02 0.441 -3.271 AKR7A3 aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase) 1 -19481643 NM_012067 1p36.13 Hs.6980 6

aldo-keto reductase activity

cytoplasm

cytosol

cellular aldehyde metabolic process

electron carrier activity

oxidoreductase activity

oxidation reduction

 
201729_s_at -0.230 7.560 -2.584 2.057e-02 0.441 -3.271 KIAA0100 KIAA0100 17 -23965584 NM_014680 17q11.2 Hs.151761 5

extracellular region

tricarboxylic acid cycle

malate dehydrogenase (acceptor) activity

 
224505_s_at -0.335 8.831 -2.584 2.059e-02 0.441 -3.272 PLCD4 phospholipase C, delta 4 2 219180875 BC006355 2q35 Hs.632528 19

phosphoinositide phospholipase C activity

signal transducer activity

calcium ion binding

nucleus

cytoplasm

endoplasmic reticulum

intracellular signaling cascade

membrane

lipid catabolic process

hydrolase activity

Inositol phosphate metabolism

Metabolic pathways

Calcium signaling pathway

Phosphatidylinositol signaling system

225996_at 0.372 7.455 2.583 2.060e-02 0.441 -3.272 LONRF2 LON peptidase N-terminal domain and ring finger 2 2 -100256184 AV709727 2q11.2 Hs.21380 4

ATP-dependent peptidase activity

protein binding

proteolysis

zinc ion binding

metal ion binding

 
203726_s_at 0.348 4.918 2.583 2.061e-02 0.441 -3.273 LAMA3 laminin, alpha 3 18 19523559, 19706981 NM_000227 18q11.2 Hs.436367 49

receptor binding

structural molecule activity

extracellular region

basement membrane

laminin-1 complex

epidermis development

regulation of cell adhesion

regulation of cell migration

regulation of embryonic development

Focal adhesion

ECM-receptor interaction

Pathways in cancer

Small cell lung cancer

209124_at 0.316 6.129 2.583 2.061e-02 0.441 -3.273 MYD88 myeloid differentiation primary response gene (88) 3 38154972 U70451 3p22 Hs.82116 98

response to molecule of fungal origin

MyD88-dependent toll-like receptor signaling pathway

transmembrane receptor activity

Toll binding

death receptor binding

protein binding

cytoplasm

inflammatory response

Toll signaling pathway

response to virus

immunoglobulin mediated immune response

cytokine-mediated signaling pathway

intrinsic to membrane

lipopolysaccharide-mediated signaling pathway

response to lipopolysaccharide

positive regulation of tumor necrosis factor production

regulation of cell proliferation

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of chemokine biosynthetic process

innate immune response

type I interferon biosynthetic process

positive regulation of transcription from RNA polymerase II promoter

positive regulation of JNK cascade

positive regulation of smooth muscle cell proliferation

positive regulation of NF-kappaB transcription factor activity

Apoptosis

Toll-like receptor signaling pathway

223436_s_at 0.631 8.773 2.583 2.062e-02 0.441 -3.273 TRPT1 tRNA phosphotransferase 1 11 -63747847, -63747847 BC005133 11q13.1 Hs.326586 6

tRNA 2'-phosphotransferase activity

tRNA splicing, via endonucleolytic cleavage and ligation

transferase activity, transferring phosphorus-containing groups

 
206355_at -0.968 5.808 -2.582 2.067e-02 0.442 -3.275 GNAL guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type 18 11679135, 11741561 R20102 18p11.22-p11.21 Hs.136295 16

nucleotide binding

GTPase activity

signal transducer activity

GTP binding

signal transduction

G-protein coupled receptor protein signaling pathway

guanyl nucleotide binding

Calcium signaling pathway

Olfactory transduction

214242_at 0.219 4.748 2.582 2.068e-02 0.442 -3.276 MAN1A2 mannosidase, alpha, class 1A, member 2 1 117711607 AI189305 1p13 Hs.435938 25

mannosyl-oligosaccharide 1,2-alpha-mannosidase activity

calcium ion binding

membrane fraction

Golgi apparatus

N-glycan processing

metabolic process

membrane

integral to membrane

hydrolase activity, acting on glycosyl bonds

N-Glycan biosynthesis

Metabolic pathways

1554258_a_at -0.289 5.286 -2.580 2.073e-02 0.443 -3.278 DNAJC5B DnaJ (Hsp40) homolog, subfamily C, member 5 beta 8 67096344 AF368276 8q13.1 Hs.491885 3

protein folding

membrane

heat shock protein binding

unfolded protein binding

 
229393_at 0.337 4.659 2.580 2.074e-02 0.443 -3.279 L3MBTL3 l(3)mbt-like 3 (Drosophila) 6 130381426 AA088346 6q23 Hs.658051 8

molecular_function

nucleus

regulation of transcription

 
205163_at -0.596 13.398 -2.579 2.077e-02 0.443 -3.280 MYLPF myosin light chain, phosphorylatable, fast skeletal muscle 16 30293623 NM_013292 16p11.2 Hs.50889 5

motor activity

calcium ion binding

muscle myosin complex

skeletal muscle tissue development

structural constituent of muscle

myosin complex

Focal adhesion

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

203369_x_at -0.352 7.046 -2.579 2.077e-02 0.443 -3.280 PDLIM7 PDZ and LIM domain 7 (enigma) 5 -176849852, -176843000 AI825846 5q35.3 Hs.533040 22

ossification

protein binding

cytoplasm

cytoskeleton

receptor-mediated endocytosis

multicellular organismal development

zinc ion binding

cell differentiation

metal ion binding

 
220901_at -0.467 5.578 -2.578 2.081e-02 0.443 -3.281 GPR157 G protein-coupled receptor 157 1 -9087062 NM_024980 1p36.23 Hs.632367 5

G-protein coupled receptor activity

plasma membrane

G-protein coupled receptor protein signaling pathway

integral to membrane

 
218397_at 0.342 6.817 2.578 2.082e-02 0.443 -3.282 FANCL Fanconi anemia, complementation group L 2 -58239881 NM_018062 2p16.1 Hs.631890 19

protein binding

nucleus

cytoplasm

DNA repair

response to DNA damage stimulus

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

Ubiquitin mediated proteolysis

235216_at -0.400 3.166 -2.578 2.084e-02 0.443 -3.283 ESCO1 establishment of cohesion 1 homolog 1 (S. cerevisiae) 18 -17363259 BG532121 18q11.2 Hs.464733 8

damaged DNA binding

DNA-directed DNA polymerase activity

nucleus

DNA repair

cell cycle

zinc ion binding

acyltransferase activity

transferase activity

metal ion binding

 
218937_at 0.303 5.265 2.577 2.085e-02 0.444 -3.283 ZNF434 zinc finger protein 434 16 -3372085 NM_017810 16p13.3 Hs.592078 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
232905_at 0.371 4.405 2.577 2.086e-02 0.444 -3.284 GTF2H5 general transcription factor IIH, polypeptide 5 6 158509366 AK024874 6q25.3 Hs.356224 11

DNA binding

nucleus

nucleotide-excision repair

response to DNA damage stimulus

regulation of transcription

Nucleotide excision repair

211536_x_at -0.235 5.661 -2.577 2.086e-02 0.444 -3.284 MAP3K7 mitogen-activated protein kinase kinase kinase 7 6 -91282073, -91282073 AB009358 6q16.1-q16.3 Hs.719192 114

nucleotide binding

magnesium ion binding

positive regulation of T cell cytokine production

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

cytosol

protein amino acid phosphorylation

signal transduction

transforming growth factor beta receptor signaling pathway

activation of NF-kappaB-inducing kinase activity

transferase activity

positive regulation of interleukin-2 production

T cell receptor signaling pathway

positive regulation of T cell activation

MAPK signaling pathway

Wnt signaling pathway

Adherens junction

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

T cell receptor signaling pathway

225215_s_at -0.302 8.333 -2.576 2.089e-02 0.444 -3.285 MTRF1L mitochondrial translational release factor 1-like 6 -153350092 BF665339 6q25-q26 Hs.225836 Hs.304818 9

cytoplasm

mitochondrion

translational termination

translation release factor activity, codon specific

 
200732_s_at -0.460 10.872 -2.576 2.089e-02 0.444 -3.285 PTP4A1 protein tyrosine phosphatase type IVA, member 1 6 64339878 AL578310 6q12 Hs.227777 Hs.706850 28

protein tyrosine phosphatase activity

cytoplasm

early endosome

endoplasmic reticulum

spindle

plasma membrane

protein amino acid dephosphorylation

cell cycle

multicellular organismal development

hydrolase activity

 
215028_at 0.466 4.078 2.576 2.092e-02 0.444 -3.286 SEMA6A sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 5 -115807149 AB002438 5q23.1 Hs.156967 11

receptor activity

protein binding

apoptosis

cytoskeleton organization

cell surface receptor linked signal transduction

multicellular organismal development

nervous system development

axon guidance

organ morphogenesis

membrane

integral to membrane

cell differentiation

axon

Axon guidance

214258_x_at -0.268 6.675 -2.575 2.095e-02 0.444 -3.287 KAT5 K(lysine) acetyltransferase 5 11 65236064 AA886971 11q13 Hs.397010 88

chromatin

chromatin binding

transcription coactivator activity

histone acetyltransferase activity

protein binding

nucleus

nucleolus

cytoplasm

double-strand break repair

chromatin assembly or disassembly

DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator

zinc ion binding

acyltransferase activity

chromatin modification

histone acetylation

transferase activity

androgen receptor signaling pathway

Piccolo NuA4 histone acetyltransferase complex

NuA4 histone acetyltransferase complex

regulation of growth

interspecies interaction between organisms

regulation of transcription

positive regulation of transcription, DNA-dependent

positive regulation of transcription, DNA-dependent

metal ion binding

perinuclear region of cytoplasm

androgen receptor binding

 
212566_at -0.285 10.545 -2.575 2.095e-02 0.444 -3.288 MAP4 microtubule-associated protein 4 3 -47989573, -47867183, -47867183 AL523310 3p21 Hs.517949 40

structural molecule activity

protein binding

microtubule

microtubule associated complex

negative regulation of microtubule depolymerization

 
211665_s_at -0.677 5.476 -2.575 2.097e-02 0.444 -3.288 SOS2 son of sevenless homolog 2 (Drosophila) 14 -49653595 L20686 14q21 Hs.291533 20

DNA binding

Rho guanyl-nucleotide exchange factor activity

protein binding

cellular_component

intracellular

regulation of Rho protein signal transduction

regulation of small GTPase mediated signal transduction

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

Dorso-ventral axis formation

Focal adhesion

Gap junction

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Insulin signaling pathway

GnRH signaling pathway

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Endometrial cancer

Glioma

Prostate cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Non-small cell lung cancer

205706_s_at -0.383 5.413 -2.574 2.097e-02 0.444 -3.288 ANKRD26 ankyrin repeat domain 26 10 -27333050 NM_014915 10pter-q22.1 Hs.361041 8    
218185_s_at -0.407 7.440 -2.574 2.100e-02 0.444 -3.289 ARMC1 armadillo repeat containing 1 8 -66677627 NM_018120 8q13.1 Hs.269542 3

binding

metal ion transport

metal ion binding

 
227388_at -0.427 7.954 -2.574 2.100e-02 0.444 -3.289 TUSC1 tumor suppressor candidate 1 9 -25666386 AA479016 9p21.2 Hs.26268 Hs.606014 2    
204777_s_at 0.238 5.155 2.574 2.100e-02 0.444 -3.289 MAL mal, T-cell differentiation protein 2 95055205 NM_002371 2cen-q13 Hs.80395 28

membrane raft polarization

endosome

endoplasmic reticulum

integral to plasma membrane

induction of apoptosis

central nervous system development

lipid binding

channel activity

membrane

apical plasma membrane

apoptotic protease activator activity

structural constituent of myelin sheath

cell differentiation

myelination

myelination

membrane raft

apical protein localization

 
230404_at 0.233 4.668 2.574 2.101e-02 0.444 -3.290 FLJ44606 glutaredoxin-like protein YDR286C homolog 5   AI418538 5q23.2 Hs.49573 1

transport

electron transport chain

 
223532_at 0.296 5.944 2.574 2.101e-02 0.444 -3.290 ANKRD39 ankyrin repeat domain 39 2 -96877450 AF151034 2q11.2 Hs.709507 6    
213789_at 0.217 5.459 2.573 2.103e-02 0.445 -3.291 EBP emopamil binding protein (sterol isomerase) X 48265107 N58493 Xp11.23-p11.22 Hs.30619 19

C-8 sterol isomerase activity

skeletal system development

steroid delta-isomerase activity

transmembrane receptor activity

endoplasmic reticulum

microsome

integral to plasma membrane

cholesterol biosynthetic process

drug transporter activity

membrane

isomerase activity

hemopoiesis

cholestenol delta-isomerase activity

Steroid biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

210284_s_at -0.377 6.650 -2.572 2.108e-02 0.445 -3.293 MAP3K7IP2 mitogen-activated protein kinase kinase kinase 7 interacting protein 2 6 149680755 AF241230 6q25.1-q25.3 Hs.269775 39

protein binding

intracellular

cytoplasm

cytosol

cytosol

zinc ion binding

membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of I-kappaB kinase/NF-kappaB cascade

metal ion binding

MAPK signaling pathway

Toll-like receptor signaling pathway

219127_at 0.275 4.213 2.571 2.112e-02 0.446 -3.294 ATAD4 ATPase family, AAA domain containing 4 17 -43384332 NM_024320 17q21.32 Hs.368260 1    
206966_s_at 0.276 5.446 2.571 2.112e-02 0.446 -3.295 KLF12 Kruppel-like factor 12 13 -73158149 NM_016285 13q22 Hs.373857 Hs.592500 17

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

transcription corepressor activity

intracellular

nucleus

zinc ion binding

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

 
220416_at 0.276 2.895 2.570 2.116e-02 0.446 -3.296 ATP8B4 ATPase, class I, type 8B, member 4 15 -47937726 NM_024837 15q21.2 Hs.511311 7

nucleotide binding

magnesium ion binding

phospholipid-translocating ATPase activity

ATP binding

ATP biosynthetic process

ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism

phospholipid transport

membrane

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

 
204781_s_at -0.295 4.273 -2.569 2.118e-02 0.446 -3.297 FAS Fas (TNF receptor superfamily, member 6) 10 90740267, 90740267 NM_000043 10q24.1 Hs.244139 589

immunoglobulin production

renal system process

transmembrane receptor activity

extracellular region

soluble fraction

cytosol

plasma membrane

plasma membrane

protein complex assembly

anti-apoptosis

activation-induced cell death of T cells

inflammatory cell apoptosis

transformed cell apoptosis

immune response

signal transduction

induction of apoptosis via death domain receptors

activation of pro-apoptotic gene products

response to toxin

external side of plasma membrane

gene expression

positive regulation of necrotic cell death

integral to membrane

B cell mediated immunity

kinase binding

death-inducing signaling complex

identical protein binding

negative thymic T cell selection

regulation of lymphocyte differentiation

regulation of myeloid cell differentiation

spleen development

negative regulation of B cell activation

protein homooligomerization

response to glucocorticoid stimulus

response to protein stimulus

MAPK signaling pathway

Cytokine-cytokine receptor interaction

p53 signaling pathway

Apoptosis

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Alzheimer's disease

Pathways in cancer

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

211653_x_at 1.089 9.225 2.569 2.119e-02 0.446 -3.297 AKR1C2 aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III) 10 -5021964 M33376 10p15-p14 Hs.460260 Hs.567256 35

cytoplasm

lipid metabolic process

prostaglandin metabolic process

digestion

steroid metabolic process

oxidoreductase activity

carboxylic acid binding

bile acid binding

3-alpha-hydroxysteroid dehydrogenase (A-specific) activity

trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity

oxidation reduction

Metabolism of xenobiotics by cytochrome P450

229271_x_at -0.288 1.889 -2.569 2.121e-02 0.446 -3.298 COL11A1 collagen, type XI, alpha 1 1 -103114610 BG028597 1p21 Hs.523446 31

extracellular matrix structural constituent

extracellular region

collagen

collagen type XI

collagen type XI

cell adhesion

visual perception

collagen fibril organization

protein binding, bridging

extracellular matrix binding

detection of mechanical stimulus involved in sensory perception of sound

Focal adhesion

ECM-receptor interaction

202115_s_at -0.168 6.997 -2.568 2.125e-02 0.447 -3.300 NOC2L nucleolar complex associated 2 homolog (S. cerevisiae) 1 -869445 NM_015658 1p36.33 Hs.405987 23

protein binding

nucleus

nucleolus

 
212219_at -0.243 8.217 -2.568 2.126e-02 0.447 -3.300 PSME4 proteasome (prosome, macropain) activator subunit 4 2 -53944707 D38521 2p16.2 Hs.413801 30

binding

nucleus

cytosol

multicellular organismal development

spermatogenesis

nuclear speck

cell differentiation

protein complex

Proteasome

1561928_s_at 0.223 5.156 2.567 2.129e-02 0.447 -3.301 C3orf16 chromosome 3 open reading frame 16 3 -150961581 AK027233 3q25.1 Hs.665988 3    
222899_at 0.236 4.932 2.566 2.131e-02 0.447 -3.302 ITGA11 integrin, alpha 11 15 -66381095 AF109681 15q23 Hs.436416 12

magnesium ion binding

receptor activity

calcium ion binding

collagen binding

substrate-bound cell migration

cell adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

muscle organ development

integrin complex

membrane

integral to membrane

Focal adhesion

ECM-receptor interaction

Regulation of actin cytoskeleton

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

212268_at -0.420 6.390 -2.566 2.132e-02 0.447 -3.303 SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 6 -2778732 NM_030666 6p25 Hs.381167 18

serine-type endopeptidase inhibitor activity

cytoplasm

peptidase inhibitor activity

 
240449_at -0.406 5.332 -2.566 2.133e-02 0.447 -3.303 ZNF341 zinc finger protein 341 20 31783468 AW204518 20q11.22 Hs.516989 4

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
212239_at 0.508 7.454 2.566 2.133e-02 0.447 -3.303 PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 5 67558217, 67620007, 67622250 AI680192 5q13.1 Hs.132225 Hs.604502 321

negative regulation of cell-matrix adhesion

insulin receptor binding

insulin-like growth factor receptor binding

phosphatidylinositol binding

intracellular

cytosol

cytosol

1-phosphatidylinositol-4-phosphate 3-kinase, class IA complex

protein amino acid phosphorylation

signal transduction

insulin receptor signaling pathway

phosphoinositide 3-kinase cascade

membrane

protein phosphatase binding

B cell differentiation

positive regulation of cell migration

phosphoinositide 3-kinase regulator activity

negative regulation of apoptosis

ErbB-3 class receptor binding

insulin binding

insulin receptor substrate binding

interspecies interaction between organisms

negative regulation of osteoclast differentiation

positive regulation of glucose import

phosphoinositide phosphorylation

insulin-like growth factor receptor signaling pathway

growth hormone receptor signaling pathway

regulation of establishment of protein localization

ErbB signaling pathway

Chemokine signaling pathway

Phosphatidylinositol signaling system

mTOR signaling pathway

Apoptosis

VEGF signaling pathway

Focal adhesion

Toll-like receptor signaling pathway

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Insulin signaling pathway

Type II diabetes mellitus

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Chronic myeloid leukemia

Acute myeloid leukemia

Small cell lung cancer

Non-small cell lung cancer

220199_s_at -0.471 5.831 -2.566 2.134e-02 0.447 -3.304 AIDA axin interactor, dorsalization associated 1 -220907977 NM_022831 1q41 Hs.156625 Hs.534965 Hs.707666 6

protein binding

cellular_component

multicellular organismal development

dorsal/ventral pattern formation

regulation of protein homodimerization activity

negative regulation of JNK cascade

 
1556136_at -1.587 6.925 -2.565 2.136e-02 0.447 -3.304 MYLK4 myosin light chain kinase family, member 4 6 -2608861 BU675945 6p25.2 Hs.127830 4

nucleotide binding

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

transferase activity

 
226251_at -0.330 5.926 -2.565 2.136e-02 0.447 -3.304 ASXL2 additional sex combs like 2 (Drosophila) 2 -25815756 AW295549 2p24.1 Hs.594386 6

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
231178_at 0.572 5.558 2.565 2.138e-02 0.447 -3.305 SPATA4 spermatogenesis associated 4 4 -177342718 BG150360 4q34.2 Hs.481235 4

molecular_function

cellular_component

cytoplasm

apoptosis

spermatogenesis

 
1570210_x_at 0.302 6.102 2.565 2.139e-02 0.447 -3.306 SAPS2 SAPS domain family, member 2 22 49128625 BC022346 22q13.33 Hs.449098 Hs.710221 8

protein binding

cytoplasm

 
219014_at 0.425 4.372 2.565 2.139e-02 0.447 -3.306 PLAC8 placenta-specific 8 4 -84234330, -84230234, -84230234 NM_016619 4q21.22 Hs.546392 5    
205321_at -0.632 5.896 -2.564 2.140e-02 0.447 -3.306 EIF2S3 eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa X 23982985 NM_001415 Xp22.2-p22.1 Hs.539684 21

nucleotide binding

translation initiation factor activity

GTPase activity

protein binding

GTP binding

cytosol

translational initiation

 
212617_at 0.211 4.980 2.564 2.143e-02 0.448 -3.307 ZNF609 zinc finger protein 609 15 62578671 AB002293 15q22.31 Hs.595451 Hs.696256 Hs.719276 7

intracellular

nucleus

zinc ion binding

metal ion binding

 
218399_s_at 0.235 5.381 2.563 2.144e-02 0.448 -3.308 CDCA4 cell division cycle associated 4 14 -104546954 NM_017955 14q32.33 Hs.34045 Hs.532504 Hs.715701 9

nucleus

 
1555307_at -0.192 2.240 -2.563 2.145e-02 0.448 -3.308 TTF2 transcription termination factor, RNA polymerase II 1 117404471 BC030058 1p22 Hs.486818 12

nucleotide binding

DNA binding

RNA polymerase II transcription termination factor activity

helicase activity

ATP binding

nucleus

spliceosomal complex

cytoplasm

transcription termination

mRNA processing

transcription elongation factor complex

ATP-dependent helicase activity

DNA-dependent ATPase activity

zinc ion binding

RNA splicing

hydrolase activity

regulation of transcription

 
227998_at 0.366 7.830 2.563 2.147e-02 0.448 -3.309 S100A16 S100 calcium binding protein A16 1 -151845990 AA045184 1q21 Hs.515714 8

calcium ion binding

nucleus

cytoplasm

protein homodimerization activity

response to calcium ion

 
1555173_at 0.219 2.711 2.562 2.150e-02 0.448 -3.310 STX19 syntaxin 19 3 -95215904 BC034696 3q11 Hs.679768 2

SNAP receptor activity

intracellular protein transport

membrane

vesicle-mediated transport

SNARE interactions in vesicular transport

201899_s_at -0.243 9.213 -2.561 2.153e-02 0.449 -3.311 UBE2A ubiquitin-conjugating enzyme E2A (RAD6 homolog) X 118592526, 118598325 NM_003336 Xq24-q25 Hs.379466 16

nucleotide binding

chromatin

ubiquitin-protein ligase activity

ATP binding

postreplication repair

ubiquitin-dependent protein catabolic process

response to DNA damage stimulus

positive regulation of cell proliferation

response to UV

ligase activity

ubiquitin protein ligase binding

histone H2A ubiquitination

post-translational protein modification

regulation of protein metabolic process

protein autoubiquitination

Ubiquitin mediated proteolysis

208076_at 0.271 3.011 2.561 2.155e-02 0.449 -3.312 HIST1H4D histone cluster 1, H4d 6 -26296916 NM_003539 6p21.3 Hs.248179 10  

Systemic lupus erythematosus

215040_at 0.306 6.661 2.561 2.155e-02 0.449 -3.312 RNASEH2B ribonuclease H2, subunit B 13 50381892, 50381892 AL049218 13q14.3 Hs.306291 13

nucleus

DNA replication

218773_s_at 0.224 10.273 2.560 2.158e-02 0.449 -3.313 MSRB2 methionine sulfoxide reductase B2 10 23424432 NM_012228 10p12 Hs.461420 14

protein-methionine-R-oxide reductase activity

transcription factor activity

mitochondrion

peptide-methionine-(S)-S-oxide reductase activity

zinc ion binding

oxidoreductase activity

protein repair

metal ion binding

oxidation reduction

 
225447_at -0.596 7.547 -2.560 2.159e-02 0.449 -3.314 GPD2 glycerol-3-phosphate dehydrogenase 2 (mitochondrial) 2 157000210, 157001145 AA613031 2q24.1 Hs.512382 20

glycerol-3-phosphate dehydrogenase activity

calcium ion binding

mitochondrion

mitochondrial inner membrane

glycerol-3-phosphate metabolic process

gluconeogenesis

glycerol-3-phosphate dehydrogenase complex

oxidoreductase activity

oxidation reduction

Glycerophospholipid metabolism

221322_at 0.208 2.626 2.559 2.162e-02 0.450 -3.315 NPVF neuropeptide VF precursor 7 -25230715 NM_022150 7p21-p15 Hs.60473 8

G-protein coupled receptor activity

protein binding

extracellular region

neuropeptide signaling pathway

membrane

 
1554808_at -0.255 3.564 -2.558 2.166e-02 0.450 -3.317 ACP1 acid phosphatase 1, soluble 2 254868, 254868 BC020699 2p25 Hs.558296 69

acid phosphatase activity

non-membrane spanning protein tyrosine phosphatase activity

soluble fraction

cytoplasm

protein amino acid dephosphorylation

hydrolase activity

identical protein binding

gamma-Hexachlorocyclohexane degradation

Riboflavin metabolism

Adherens junction

224756_s_at -0.356 7.144 -2.558 2.168e-02 0.450 -3.318 BAT5 HLA-B associated transcript 5 6 -31762714, -3100861, -2902325 AL578487 6p21.3 Hs.388188 14

protein binding

cytosol

defense response

response to unfolded protein

response to nutrient

membrane

integral to membrane

protein complex

NF-kappaB binding

 
230645_at 0.313 7.675 2.557 2.171e-02 0.451 -3.319 FRMD3 FERM domain containing 3 9 -85052126 BF110588 9q21.32 Hs.709357 7

binding

cytoplasm

cytoskeleton

cytoskeletal protein binding

membrane

integral to membrane

extrinsic to membrane

 
218120_s_at 0.328 6.908 2.556 2.174e-02 0.451 -3.320 HMOX2 heme oxygenase (decycling) 2 16 4464719, 4466341, 4485859 D21243 16p13.3 Hs.284279 32

response to hypoxia

heme oxygenase (decyclizing) activity

iron ion binding

protein binding

endoplasmic reticulum

microsome

plasma membrane

heme oxidation

electron carrier activity

oxidoreductase activity

metal ion binding

oxidation reduction

Porphyrin and chlorophyll metabolism

226922_at 0.327 6.751 2.556 2.175e-02 0.451 -3.320 RANBP2 RAN binding protein 2 2 108702368 BF215302 2q12.3 Hs.199561 Hs.715056 61

peptidyl-prolyl cis-trans isomerase activity

protein binding

intracellular

nucleus

nuclear pore

cytosol

protein folding

protein import into nucleus

zinc ion binding

Ran GTPase binding

protein transport

isomerase activity

modification-dependent protein catabolic process

metal ion binding

intracellular transport

mRNA transport

intracellular protein transmembrane transport

 
209947_at 0.254 6.629 2.556 2.175e-02 0.451 -3.320 UBAP2L ubiquitin associated protein 2-like 1 152459278, 152459948 BC003170 1q21.3 Hs.490551 12

protein binding

 
215886_x_at -0.183 4.869 -2.556 2.177e-02 0.451 -3.321 USP12 ubiquitin specific peptidase 12 13 -26540437 AF022790 13q12.13 Hs.42400 6

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

protein binding

cellular_component

protein modification process

ubiquitin-dependent protein catabolic process

peptidase activity

protein deubiquitination

 
229994_at 0.382 5.018 2.556 2.178e-02 0.451 -3.321 NFIA nuclear factor I/A 1 61315533, 61320121, 61320567 R45950 1p31.3-p31.2 Hs.594180 Hs.710546 20

transcription factor activity

intracellular

nucleus

nucleus

cytoplasm

plasma membrane

DNA replication

regulation of transcription, DNA-dependent

transcription factor binding

viral genome replication

 
212686_at 0.688 4.046 2.554 2.183e-02 0.452 -3.323 PPM1H protein phosphatase 1H (PP2C domain containing) 12 -61324030 AB032983 12q14.1-q14.2 Hs.435479 5

phosphoprotein phosphatase activity

hydrolase activity

 
238018_at -0.198 2.506 -2.554 2.184e-02 0.452 -3.324 FAM150B family with sequence similarity 150, member B 2 -269560 BF449053 2p25.3 Hs.355207 2

extracellular region

 
221688_s_at -0.337 8.008 -2.554 2.184e-02 0.452 -3.324 IMP3 IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast) 15 -73718490 AL136913 15q24 Hs.513043 21

protein binding

intracellular

nucleus

nucleolus

rRNA processing

rRNA binding

ribonucleoprotein complex

 
229850_at 0.354 4.924 2.554 2.184e-02 0.452 -3.324 KDSR 3-ketodihydrosphingosine reductase 18 -59145950 N30152 18q21.3 Hs.74050 12

binding

extracellular space

endoplasmic reticulum

membrane

integral to membrane

oxidoreductase activity

3-dehydrosphinganine reductase activity

oxidation reduction

Sphingolipid metabolism

Metabolic pathways

229732_at 0.388 4.007 2.554 2.185e-02 0.452 -3.324 ZNF823 zinc finger protein 823 19 -11693079 AI417785 19p13.2 Hs.142167 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
208680_at -0.338 10.706 -2.554 2.186e-02 0.452 -3.325 PRDX1 peroxiredoxin 1 1 -45749293 L19184 1p34.1 Hs.180909 62

skeletal system development

protein binding

nucleus

cytoplasm

mitochondrion

cell proliferation

oxidoreductase activity

melanosome

hydrogen peroxide catabolic process

cell redox homeostasis

peroxiredoxin activity

oxidation reduction

 
242492_at 0.289 4.835 2.553 2.188e-02 0.452 -3.326 CLNS1A chloride channel, nucleotide-sensitive, 1A 11 -77004844 AA412065 11q13.5-q14 Hs.430733 Hs.598033 24

spliceosomal snRNP biogenesis

nucleus

cytoplasm

cytosol

cytoskeleton

plasma membrane

transport

chloride transport

cell volume homeostasis

blood circulation

 
201926_s_at -0.417 7.311 -2.553 2.189e-02 0.452 -3.326 CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 1 205561439 BC001288 1q32 Hs.126517 118

soluble fraction

plasma membrane

integral to plasma membrane

complement activation, classical pathway

elevation of cytosolic calcium ion concentration

anchored to membrane

innate immune response

membrane raft

respiratory burst

Complement and coagulation cascades

Hematopoietic cell lineage

212446_s_at 0.618 5.692 2.553 2.190e-02 0.452 -3.326 LASS6 LAG1 homolog, ceramide synthase 6 2 169021080 AI658534 2q24.3 Hs.506829 Hs.718403 5

transcription factor activity

nucleus

endoplasmic reticulum

regulation of transcription, DNA-dependent

lipid biosynthetic process

membrane

integral to membrane

sphingolipid biosynthetic process

sequence-specific DNA binding

ceramide biosynthetic process

sphingosine N-acyltransferase activity

 
223301_s_at 0.290 6.164 2.552 2.193e-02 0.452 -3.327 CCDC82 coiled-coil domain containing 82 11 -95725576 AF245436 11q21 Hs.525088 9

protein binding

 
220397_at -0.245 3.400 -2.552 2.193e-02 0.452 -3.328 MDM1 Mdm1 nuclear protein homolog (mouse) 12 -67005051, -66974612 NM_020128 12q15 Hs.655702 6

nucleus

 
201476_s_at -0.358 6.428 -2.552 2.195e-02 0.452 -3.328 RRM1 ribonucleotide reductase M1 11 4072499 AI692974 11p15.5 Hs.445705 44

ribonucleoside-diphosphate reductase activity

protein binding

ATP binding

cytoplasm

cytosol

ribonucleoside-diphosphate reductase complex

DNA replication

deoxyribonucleotide biosynthetic process

oxidoreductase activity

purine nucleotide binding

protein oligomerization

oxidation reduction

Purine metabolism

Pyrimidine metabolism

Glutathione metabolism

Metabolic pathways

219456_s_at 0.203 3.966 2.551 2.197e-02 0.452 -3.329 RIN3 Ras and Rab interactor 3 14 92049877 AW027923 14q32.12 Hs.326822 8

GTPase activator activity

protein binding

cellular_component

cytoplasm

early endosome

endocytosis

signal transduction

Ras GTPase binding

cytoplasmic vesicle

 
226635_at -0.444 7.121 -2.551 2.199e-02 0.452 -3.330 LOC401504 hypothetical gene supported by AK091718 9   BG170478 9p13.2 Hs.446271 2    
211982_x_at 0.196 6.856 2.550 2.201e-02 0.452 -3.331 XPO6 exportin 6 16 -28016816 AL546600 16p11.2 Hs.460468 11

protein import into nucleus, docking

protein binding

nucleus

nuclear pore

cytoplasm

protein export from nucleus

intracellular protein transport

protein transporter activity

 
227374_at 0.255 6.107 2.550 2.201e-02 0.452 -3.331 EARS2 glutamyl-tRNA synthetase 2, mitochondrial (putative) 16 -23440834 AA833716 16p12.2 Hs.620541 6

nucleotide binding

RNA binding

glutamate-tRNA ligase activity

ATP binding

cytoplasm

mitochondrion

mitochondrial matrix

glutamyl-tRNA aminoacylation

ligase activity

Porphyrin and chlorophyll metabolism

Aminoacyl-tRNA biosynthesis

Metabolic pathways

233836_at 0.275 6.106 2.550 2.202e-02 0.452 -3.331 TNRC6A trinucleotide repeat containing 6A 16 24648549 AK025277 16p11.2 Hs.655057 28

nucleotide binding

cytoplasmic mRNA processing body

RNA binding

cytoplasm

regulation of translation

gene silencing by RNA

micro-ribonucleoprotein complex

gene silencing by miRNA, negative regulation of translation

 
1563290_at 0.218 5.303 2.549 2.205e-02 0.452 -3.332 DNAH3 dynein, axonemal, heavy chain 3 16 -20851976 Z83805 16p12.3 Hs.526500 7

nucleotide binding

ciliary or flagellar motility

microtubule motor activity

ATP binding

axonemal dynein complex

microtubule

cilium

microtubule-based movement

ATPase activity

cilium axoneme

Huntington's disease

1565947_a_at 0.233 3.298 2.549 2.205e-02 0.452 -3.332 CHML choroideremia-like (Rab escort protein 2) 1 -239858789 AJ293392 1q42-qter Hs.654545 17

Rab geranylgeranyltransferase activity

GTPase activator activity

Rab-protein geranylgeranyltransferase complex

intracellular protein transport

visual perception

regulation of GTPase activity

 
203149_at -0.237 5.774 -2.549 2.206e-02 0.452 -3.333 PVRL2 poliovirus receptor-related 2 (herpesvirus entry mediator B) 19 50041232, 50041232 NM_002856 19q13.2 Hs.655455 38

positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target

positive regulation of immunoglobulin mediated immune response

plasma membrane

cell-cell junction

zonula adherens

cell adhesion

homophilic cell adhesion

spermatid development

cell surface

coreceptor activity

integral to membrane

viral envelope fusion with host membrane

positive regulation of mast cell activation

susceptibility to natural killer cell mediated cytotoxicity

virion attachment, binding of host cell surface coreceptor

cell adhesion molecule binding

adhesion to symbiont

susceptibility to T cell mediated cytotoxicity

Cell adhesion molecules (CAMs)

Adherens junction

209067_s_at -0.307 9.175 -2.549 2.206e-02 0.452 -3.333 HNRPDL heterogeneous nuclear ribonucleoprotein D-like 4 -83563370 D89092 4q13-q21 Hs.527105 14

nucleotide binding

DNA binding

double-stranded DNA binding

single-stranded DNA binding

RNA binding

protein binding

nucleus

cytoplasm

RNA processing

poly(A) RNA binding

heterogeneous nuclear ribonucleoprotein complex

regulation of transcription

 
204140_at 0.339 5.469 2.549 2.206e-02 0.452 -3.333 TPST1 tyrosylprotein sulfotransferase 1 7 65307693 NM_003596 7q11.21 Hs.421194 17

membrane fraction

Golgi apparatus

peptidyl-tyrosine sulfation

inflammatory response

protein-tyrosine sulfotransferase activity

membrane

integral to membrane

transferase activity

 
241698_at -0.206 3.005 -2.549 2.207e-02 0.452 -3.333 RFTN2 raftlin family member 2 2 -198143771 AI206317 2q33.1 Hs.591615 4

plasma membrane

 
217952_x_at -0.417 7.112 -2.549 2.207e-02 0.452 -3.333 PHF3 PHD finger protein 3 6 64414389 BF430956 6q12 Hs.348921 13

molecular_function

protein binding

cellular_component

nucleus

transcription

multicellular organismal development

zinc ion binding

metal ion binding

 
241729_at -0.239 3.747 -2.549 2.208e-02 0.452 -3.334 DOK6 docking protein 6 18 65219270 AW173080 18q22.2 Hs.278285 4

insulin receptor binding

 
219634_at -0.227 4.306 -2.548 2.209e-02 0.452 -3.334 CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 12 103374907 NM_018413 12q Hs.17569 11

N-acetylgalactosamine 4-O-sulfotransferase activity

chondrocyte development

Golgi apparatus

respiratory gaseous exchange

post-embryonic development

membrane

integral to membrane

carbohydrate biosynthetic process

transferase activity

chondroitin sulfate biosynthetic process

negative regulation of transforming growth factor beta receptor signaling pathway

polysaccharide localization

tail morphogenesis

regulation of cell proliferation

embryonic digit morphogenesis

negative regulation of apoptosis

chondroitin 4-sulfotransferase activity

developmental growth

embryonic viscerocranium morphogenesis

embryonic skeletal system morphogenesis

cartilage development

Chondroitin sulfate biosynthesis

Sulfur metabolism

218757_s_at -0.360 7.156 -2.548 2.209e-02 0.452 -3.334 UPF3B UPF3 regulator of nonsense transcripts homolog B (yeast) X -118852016 NM_023010 Xq25-q26 Hs.103832 26

nucleotide binding

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

nuclear mRNA splicing, via spliceosome

RNA binding

nucleocytoplasmic transporter activity

protein binding

nucleus

cytoplasm

transport

mRNA transport

 
209908_s_at -0.262 3.082 -2.548 2.209e-02 0.452 -3.334 TGFB2 transforming growth factor, beta 2 1 216586013 BF061658 1q41 Hs.133379 112

cell morphogenesis

skeletal system development

cartilage condensation

angiogenesis

beta-amyloid binding

blood vessel development

eye development

response to hypoxia

blood vessel remodeling

receptor signaling protein serine/threonine kinase activity

type II transforming growth factor beta receptor binding

type II transforming growth factor beta receptor binding

cytokine activity

extracellular region

extracellular region

extracellular region

extracellular space

induction of apoptosis

activation-induced cell death of T cells

cell cycle arrest

transforming growth factor beta receptor signaling pathway

SMAD protein nuclear translocation

cell-cell signaling

axon guidance

salivary gland morphogenesis

growth factor activity

cell death

positive regulation of cell proliferation

glial cell migration

embryonic development

positive regulation of epithelial cell migration

negative regulation of alkaline phosphatase activity

positive regulation of epithelial to mesenchymal transition

positive regulation of phosphoinositide 3-kinase cascade

menstrual cycle phase

hemopoiesis

collagen fibril organization

positive regulation of cell growth

negative regulation of cell growth

axon

neutrophil chemotaxis

neutrophil chemotaxis

extracellular matrix

hair follicle morphogenesis

platelet alpha granule lumen

activation of protein kinase activity

response to progesterone stimulus

positive regulation of stress-activated MAPK cascade

regulation of transforming growth factor-beta2 production

positive regulation of cell adhesion mediated by integrin

wound healing

dopamine biosynthetic process

odontogenesis

protein homodimerization activity

cell soma

positive regulation of neuron apoptosis

cell-cell junction organization

positive regulation of integrin biosynthetic process

positive regulation of ossification

positive regulation of cell cycle

positive regulation of heart contraction

protein heterodimerization activity

somatic stem cell division

neuron fate commitment

neuron development

generation of neurons

negative regulation of epithelial cell proliferation

negative regulation of epithelial cell proliferation

positive regulation of protein secretion

negative regulation of immune response

positive regulation of immune response

positive regulation of catagen

positive regulation of cardioblast differentiation

cardiac muscle cell proliferation

cardiac epithelial to mesenchymal transition

pathway-restricted SMAD protein phosphorylation

MAPK signaling pathway

Cytokine-cytokine receptor interaction

Cell cycle

TGF-beta signaling pathway

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Chronic myeloid leukemia

Hypertrophic cardiomyopathy (HCM)

219338_s_at 0.291 3.815 2.548 2.210e-02 0.452 -3.334 LRRC49 leucine rich repeat containing 49 15 68972040 NM_017691 15q23 Hs.12692 7

protein binding

cytoplasm

cytoskeleton

microtubule

 
203460_s_at -0.321 5.881 -2.548 2.210e-02 0.452 -3.334 PSEN1 presenilin 1 14 72672895 NM_007318 14q24.3 Hs.3260 386

kinetochore

endopeptidase activity

membrane fraction

integral to nuclear inner membrane

nuclear outer membrane

mitochondrion

endoplasmic reticulum

Golgi apparatus

integral to plasma membrane

membrane protein ectodomain proteolysis

apoptosis

anti-apoptosis

chromosome segregation

Notch receptor processing

intracellular signaling cascade

beta-catenin binding

cell death

peptidase activity

cell surface

membrane

cell-cell adhesion

protein processing

PDZ domain binding

endoplasmic reticulum calcium ion homeostasis

regulation of phosphorylation

amyloid precursor protein catabolic process

positive regulation of catalytic activity

Wnt signaling pathway

Notch signaling pathway

Neurotrophin signaling pathway

Alzheimer's disease

200608_s_at -0.319 9.185 -2.548 2.211e-02 0.452 -3.335 RAD21 RAD21 homolog (S. pombe) 8 -117927354 NM_006265 8q24 Hs.81848 33

nuclear chromosome

protein binding

nucleus

double-strand break repair

apoptosis

response to DNA damage stimulus

cell cycle

chromosome segregation

mitosis

reciprocal meiotic recombination

cell division

Cell cycle

230069_at 0.343 5.230 2.548 2.211e-02 0.452 -3.335 SFXN1 sideroflexin 1 5 174838119 BF593817   Hs.369440 18

iron ion binding

protein binding

mitochondrion

mitochondrial inner membrane

cation transport

iron ion transport

cation transmembrane transporter activity

membrane

integral to membrane

erythrocyte differentiation

 
1559661_at -0.336 3.220 -2.548 2.211e-02 0.452 -3.335 ODZ3 odz, odd Oz/ten-m homolog 3 (Drosophila) 4 183482130 AF195420 4q35.1 Hs.130438 7

signal transduction

membrane

integral to membrane

 
206833_s_at -0.406 10.363 -2.548 2.212e-02 0.452 -3.335 ACYP2 acylphosphatase 2, muscle type 2 54195913 NM_001108 2p16.2 Hs.516173 Hs.642983 16

acylphosphatase activity

phosphate metabolic process

hydrolase activity

Pyruvate metabolism

Benzoate degradation via CoA ligation

205337_at 0.240 2.805 2.547 2.214e-02 0.452 -3.336 DCT dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2) 13 -93889841 AL139318 13q32 Hs.301865 41

dopachrome isomerase activity

copper ion binding

microsome

cytosol

melanin biosynthetic process from tyrosine

metabolic process

zinc ion binding

epidermis development

membrane

integral to membrane

oxidoreductase activity

isomerase activity

melanosome

metal ion binding

pigmentation during development

cell development

Tyrosine metabolism

Metabolic pathways

Melanogenesis

209904_at 0.315 13.411 2.547 2.216e-02 0.452 -3.337 TNNC1 troponin C type 1 (slow) 3 -52460147 AF020769 3p21.3-p14.3 Hs.118845 48

calcium ion binding

troponin complex

regulation of muscle contraction

troponin I binding

troponin T binding

regulation of muscle filament sliding speed

protein homodimerization activity

regulation of ATPase activity

calcium-dependent protein binding

actin filament binding

ventricular cardiac muscle morphogenesis

cardiac muscle contraction

Calcium signaling pathway

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

223077_at 0.339 4.823 2.547 2.217e-02 0.452 -3.337 TMOD3 tropomodulin 3 (ubiquitous) 15 49909180 AW576360 15q21.1-q21.2 Hs.4998 9

actin binding

tropomyosin binding

cytoplasm

cytoskeleton

 
203974_at -0.461 8.270 -2.546 2.218e-02 0.452 -3.337 HDHD1A haloacid dehalogenase-like hydrolase domain containing 1A X -6976960 NM_012080 Xp22.32 Hs.185910 8

catalytic activity

cellular_component

metabolic process

 
225282_at 0.262 5.344 2.546 2.219e-02 0.452 -3.338 SMAP2 small ArfGAP2 1 40612314 AL137764 1p35.3-p34.1 Hs.15200 4

cytoplasm

ARF GTPase activator activity

zinc ion binding

regulation of ARF GTPase activity

metal ion binding

Endocytosis

227569_at -0.360 6.493 -2.546 2.221e-02 0.452 -3.339 LNX2 ligand of numb-protein X 2 13 -27018049 AU151331 13q12.2 Hs.132359 6

protein binding

zinc ion binding

PDZ domain binding

metal ion binding

protein homooligomerization

 
231157_at -0.359 5.922 -2.546 2.221e-02 0.452 -3.339 TTLL11 tubulin tyrosine ligase-like family, member 11 9 -123791010, -123624025 BE856668 9q33.2 Hs.640663 Hs.644262 5

tubulin-tyrosine ligase activity

cilium

microtubule basal body

protein modification process

ligase activity

 
224160_s_at -0.360 6.763 -2.545 2.222e-02 0.452 -3.339 ACAD9 acyl-Coenzyme A dehydrogenase family, member 9 3 130081022 BC001817 3q21.3 Hs.567482 12

acyl-CoA dehydrogenase activity

mitochondrion

electron carrier activity

FAD binding

oxidation reduction

Geraniol degradation

1- and 2-Methylnaphthalene degradation

201351_s_at -0.355 8.669 -2.544 2.227e-02 0.452 -3.341 YME1L1 YME1-like 1 (S. cerevisiae) 10 -27439388 AF070656 10p14 Hs.499145 Hs.74647 9

nucleotide binding

metalloendopeptidase activity

ATP binding

mitochondrion

proteolysis

peptidase activity

zinc ion binding

membrane

nucleoside-triphosphatase activity

metal ion binding

 
218097_s_at 0.221 9.332 2.544 2.230e-02 0.453 -3.342 CUEDC2 CUE domain containing 2 10 -104172991 NM_024040 10q24.32 Hs.500874 6

protein binding

nucleus

cytoplasm

modification-dependent protein catabolic process

 
217868_s_at -0.216 8.863 -2.544 2.231e-02 0.453 -3.342 METTL9 methyltransferase like 9 16 21518356 NM_016025 16p13-p12 Hs.279583 6    
203771_s_at 0.359 6.944 2.542 2.239e-02 0.454 -3.346 BLVRA biliverdin reductase A 7 43764796 AA740186 7p14-cen Hs.488143 17

biliverdin reductase activity

binding

cytoplasm

zinc ion binding

oxidoreductase activity

heme catabolic process

metal ion binding

oxidation reduction

Porphyrin and chlorophyll metabolism

202074_s_at -0.396 11.092 -2.541 2.240e-02 0.454 -3.346 OPTN optineurin 10 13182087 NM_021980 10p13 Hs.332706 65

protein targeting to Golgi

cytoplasm

Golgi apparatus

Golgi organization

signal transduction

protein C-terminus binding

cell death

cellular protein localization

Golgi to plasma membrane protein transport

perinuclear region of cytoplasm

 
220478_at 0.215 5.601 2.541 2.241e-02 0.454 -3.346 APOL5 apolipoprotein L, 5 22 34443864 NM_030642 22q12.3 Hs.326561 3

protein binding

extracellular region

cytoplasm

lipid metabolic process

lipid transport

high-density lipoprotein binding

lipid binding

lipoprotein metabolic process

 
212310_at 0.332 5.350 2.541 2.243e-02 0.454 -3.347 MIA3 melanoma inhibitory activity family, member 3 1 220858066 D87742 1q41 Hs.118474 13

positive regulation of leukocyte migration

protein binding

endoplasmic reticulum

endoplasmic reticulum membrane

exocytosis

negative regulation of cell adhesion

protein transport

membrane

integral to membrane

negative regulation of cell migration

wound healing

 
34471_at 1.727 6.034 2.541 2.244e-02 0.454 -3.348 MYH8 myosin, heavy chain 8, skeletal muscle, perinatal 17 -10234366 M36769 17p13.1 Hs.700484 10

nucleotide binding

motor activity

actin binding

calmodulin binding

ATP binding

cytoplasm

striated muscle thick filament

striated muscle contraction

structural constituent of muscle

myosin complex

myofibril

Tight junction

207864_at -0.228 2.775 -2.540 2.245e-02 0.454 -3.348 SCN7A sodium channel, voltage-gated, type VII, alpha 2 -166969784 NM_002976 2q21-q23 Hs.695947 11

voltage-gated sodium channel complex

voltage-gated ion channel activity

voltage-gated sodium channel activity

ion transport

sodium ion transport

muscle contraction

membrane

integral to membrane

sodium ion binding

 
207511_s_at -0.294 5.553 -2.540 2.245e-02 0.454 -3.348 C2orf24 chromosome 2 open reading frame 24 2 -219744862 NM_015680 2q35 Hs.4973 5

membrane

integral to membrane

 
222083_at 0.282 5.101 2.540 2.246e-02 0.454 -3.349 GLYAT glycine-N-acyltransferase 11 -58234136, -58232805 AW024233 11q12.1 Hs.145384 12

mitochondrion

acyl-CoA metabolic process

acyltransferase activity

response to toxin

transferase activity

glycine N-acyltransferase activity

 
229241_at 0.263 6.996 2.540 2.247e-02 0.454 -3.349 LDHD lactate dehydrogenase D 16 -73703258 AI623801 16q23.1 Hs.380929 5

D-lactate dehydrogenase (cytochrome) activity

protein binding

protein binding

mitochondrion

oxidoreductase activity

FAD binding

oxidation reduction

Pyruvate metabolism

218906_x_at 0.289 7.234 2.540 2.247e-02 0.454 -3.349 KLC2 kinesin light chain 2 11 65781340, 65781666, 65781749, 65781749 NM_022822 11q13.2 Hs.280792 22

microtubule motor activity

protein binding

cytosol

kinesin complex

microtubule

protein complex

 
221104_s_at -0.473 8.611 -2.539 2.249e-02 0.454 -3.350 NIPSNAP3B nipsnap homolog 3B (C. elegans) 9 106566271 NM_018376 9q31.1 Hs.429294 5    
236381_s_at -0.435 5.023 -2.539 2.249e-02 0.454 -3.350 WDR8 WD repeat domain 8 1 -3537191 AW572779 1p36.3 Hs.31714 8

protein binding

cytoplasm

 
213864_s_at -0.360 9.661 -2.538 2.254e-02 0.454 -3.352 NAP1L1 nucleosome assembly protein 1-like 1 12 -74724938 AI985751 12q21.2 Hs.524599 Hs.695185 17

protein binding

nucleus

chromatin assembly complex

DNA replication

nucleosome assembly

positive regulation of cell proliferation

melanosome

 
236418_at 0.292 3.931 2.537 2.258e-02 0.455 -3.353 TTLL10 tubulin tyrosine ligase-like family, member 10 1 1099148, 1104939 AW772075 1p36.33 Hs.454835 4

tubulin-tyrosine ligase activity

cytoplasm

cytoskeleton

microtubule

protein modification process

ligase activity

protein polyglycylation

protein-glycine ligase activity

 
1562211_a_at 0.273 5.601 2.537 2.260e-02 0.455 -3.354 ZNF491 zinc finger protein 491 19 11770390 AK096593 19p13.2 Hs.631634 5

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
205068_s_at -0.292 5.604 -2.537 2.261e-02 0.455 -3.354 ARHGAP26 Rho GTPase activating protein 26 5 142130475 BE671084 5q31 Hs.654668 13

GTPase activator activity

Rho GTPase activator activity

protein binding

cellular_component

intracellular

cytoplasm

cytoskeleton

focal adhesion

signal transduction

nervous system development

actin cytoskeleton organization

cell junction

 
61297_at -0.217 5.433 -2.537 2.261e-02 0.455 -3.354 CASKIN2 CASK interacting protein 2 17 -71007937, -71007937 AL037338 17q25.1 Hs.274408 8

molecular_function

cytoplasm

biological_process

 
242002_at 0.346 4.931 2.537 2.261e-02 0.455 -3.354 NKAIN2 Na+/K+ transporting ATPase interacting 2 6 124166767 N62814 6q21 Hs.656604 6

plasma membrane

integral to membrane

 
215067_x_at 0.245 6.772 2.536 2.262e-02 0.455 -3.355 PRDX2 peroxiredoxin 2 19 -12772426, -12768633 AU147942 19p13.2 Hs.432121 52

cytoplasm

anti-apoptosis

response to oxidative stress

response to oxidative stress

thioredoxin peroxidase activity

oxidoreductase activity

regulation of apoptosis

cell redox homeostasis

oxidation reduction

 
227442_at 0.237 6.930 2.536 2.263e-02 0.455 -3.355 COX18 COX18 cytochrome c oxidase assembly homolog (S. cerevisiae) 4 -74139279 BG283902 4q13.3 Hs.356697 5

mitochondrion

mitochondrial inner membrane

respiratory chain complex IV assembly

protein transporter activity

membrane

integral to membrane

integral to mitochondrial inner membrane

protein insertion into mitochondrial membrane

 
221569_at 0.306 6.273 2.536 2.264e-02 0.455 -3.356 AHI1 Abelson helper integration site 1 6 -135750615, -135646804 AL136797 6q23.3 Hs.386684 30    
226143_at 0.346 7.538 2.536 2.266e-02 0.455 -3.356 RAI1 retinoic acid induced 1 17 17525511 BF984830 17p11.2 Hs.655395 16

protein binding

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
225612_s_at -0.550 6.270 -2.535 2.267e-02 0.455 -3.357 B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 3 184453725 BE672260 3q28 Hs.718506 7

intracellular

Golgi apparatus

protein amino acid glycosylation

multicellular organismal development

central nervous system development

galactosyltransferase activity

beta-galactosyl-N-acetylglucosaminylgalactosylglucosyl-ceramide beta-1,3-acetylglucosaminyltransferase activity

lipopolysaccharide N-acetylglucosaminyltransferase activity

glycolipid biosynthetic process

membrane

integral to membrane

transferase activity, transferring glycosyl groups

Glycosphingolipid biosynthesis - lacto and neolacto series

Metabolic pathways

200710_at 0.365 11.429 2.535 2.268e-02 0.455 -3.357 ACADVL acyl-Coenzyme A dehydrogenase, very long chain 17 7063876 NM_000018 17p13-p11 Hs.437178 Hs.463928 30

long-chain-acyl-CoA dehydrogenase activity

mitochondrion

mitochondrial inner membrane

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

electron carrier activity

energy derivation by oxidation of organic compounds

membrane

mitochondrial nucleoid

FAD binding

oxidation reduction

Fatty acid metabolism

Metabolic pathways

214663_at -0.230 6.017 -2.535 2.269e-02 0.455 -3.358 DSTYK dual serine/threonine and tyrosine protein kinase 1 -203378254 AB007941 1q32.1 Hs.6874 9

nucleotide binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

transferase activity

 
202384_s_at -0.222 5.895 -2.534 2.271e-02 0.455 -3.358 TCOF1 Treacher Collins-Franceschetti syndrome 1 5 149717394, 149717394 AW167713 5q32-q33.1 Hs.519672 Hs.605019 39

skeletal system development

transporter activity

protein binding

nucleus

nucleolus

transport

 
206393_at -1.003 12.029 -2.534 2.271e-02 0.455 -3.358 TNNI2 troponin I type 2 (skeletal, fast) 11 1816808, 1817294, 1818007 NM_003282 11p15.5 Hs.523403 29

skeletal muscle contraction

actin binding

protein binding

nucleus

troponin complex

troponin T binding

positive regulation of transcription

 
217367_s_at -0.239 5.554 -2.533 2.276e-02 0.455 -3.360 ZHX3 zinc fingers and homeoboxes 3 20 -39240502 AB007855 20q12 Hs.380133 13

transcription factor activity

protein binding

intracellular

nucleus

cytoplasm

zinc ion binding

sequence-specific DNA binding

negative regulation of transcription, DNA-dependent

metal ion binding

 
212571_at 0.219 5.988 2.533 2.277e-02 0.455 -3.361 CHD8 chromodomain helicase DNA binding protein 8 14 -20923197 U00955 14q11.2 Hs.530698 17

nucleotide binding

chromatin

p53 binding

DNA binding

DNA helicase activity

chromatin binding

ATP binding

nucleus

chromatin assembly or disassembly

beta-catenin binding

DNA-dependent ATPase activity

transcription activator activity

transcription repressor activity

chromatin modification

hydrolase activity

negative regulation of Wnt receptor signaling pathway

methylated histone residue binding

ATP-dependent chromatin remodeling

protein complex

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

positive regulation of transcription from RNA polymerase III promoter

Wnt receptor signaling pathway through beta-catenin

Wnt signaling pathway

241866_at 0.555 4.232 2.533 2.277e-02 0.455 -3.361 SLC16A7 solute carrier family 16, member 7 (monocarboxylic acid transporter 2) 12 58369392 AW975728 12q13 Hs.439643 8

pyruvate secondary active transmembrane transporter activity

membrane fraction

plasma membrane

integral to plasma membrane

transport

pyruvate transport

symporter activity

secondary active monocarboxylate transmembrane transporter activity

organic anion transport

 
1553947_at -0.205 5.024 -2.532 2.281e-02 0.455 -3.362 EXOSC6 exosome component 6 16 -68841634 NM_058219 16q22.1 Hs.660633 Hs.719211 9

3'-5'-exoribonuclease activity

exosome (RNase complex)

RNA binding

exonuclease activity

nucleus

nucleolus

cytoplasm

rRNA processing

RNA processing

hydrolase activity

RNA degradation

38703_at -0.282 8.876 -2.532 2.281e-02 0.455 -3.362 DNPEP aspartyl aminopeptidase 2 -219946423 AF005050 2q35 Hs.258551 8

aminopeptidase activity

protein binding

cytoplasm

vacuole

proteolysis

peptide metabolic process

peptidase activity

metallopeptidase activity

zinc ion binding

metal ion binding

 
230090_at -1.116 5.755 -2.532 2.282e-02 0.455 -3.363 GDNF glial cell derived neurotrophic factor 5 -37851509, -37851509, -37851509 AW296078 5p13.1-p12 Hs.248114 86

neural crest cell migration

extracellular region

anti-apoptosis

signal transduction

nervous system development

growth factor activity

adult locomotory behavior

positive regulation of specific transcription from RNA polymerase II promoter

neuron projection development

positive regulation of monooxygenase activity

positive regulation of dopamine secretion

protein homodimerization activity

negative regulation of neuron apoptosis

mRNA stabilization

regulation of dopamine uptake

 
207564_x_at -0.461 6.670 -2.532 2.283e-02 0.455 -3.363 OGT O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) X 70669657 NM_003605 Xq13 Hs.405410 47

protein binding

nucleus

cytoplasm

cytosol

protein amino acid O-linked glycosylation

signal transduction

response to nutrient

acetylglucosaminyltransferase activity

transferase activity, transferring glycosyl groups

MLL5-L complex

O-Glycan biosynthesis

Metabolic pathways

213283_s_at 0.198 5.772 2.532 2.284e-02 0.455 -3.363 SALL2 sal-like 2 (Drosophila) 14 -21059071 BG285616 14q11.1-q12 Hs.416358 Hs.719293 14

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
239288_at -0.851 6.386 -2.532 2.284e-02 0.455 -3.363 TNIK TRAF2 and NCK interacting kinase 3 -172547417, -172262985 BF431017 3q26.2-q26.31 Hs.34024 14

nucleotide binding

protein serine/threonine kinase activity

protein serine/threonine kinase activity

small GTPase regulator activity

protein binding

ATP binding

cellular_component

protein amino acid phosphorylation

response to stress

protein kinase cascade

JNK cascade

transferase activity

 
214357_at 0.736 5.129 2.531 2.287e-02 0.456 -3.364 C1orf105 chromosome 1 open reading frame 105 1 170656452 AL035295 1q24.3 Hs.517991 4    
209242_at 0.528 4.967 2.530 2.289e-02 0.456 -3.365 PEG3 paternally expressed 3 19 -62013256, -62013256 AL042588 19q13.4 Hs.719209 18

nucleic acid binding

transcription factor activity

intracellular

nucleus

cytoplasm

regulation of transcription, DNA-dependent

apoptosis

zinc ion binding

metal ion binding

 
1560018_at 0.483 5.859 2.530 2.290e-02 0.456 -3.365 ARPP-21 cyclic AMP-regulated phosphoprotein, 21 kD 3 35658852, 35696119, 35697432 H44077 3p22.3 Hs.475902 Hs.713605 7

molecular_function

nucleic acid binding

cellular_component

cytoplasm

biological_process

 
218977_s_at 0.320 5.319 2.530 2.291e-02 0.456 -3.366 TRNAU1AP tRNA selenocysteine 1 associated protein 1 1 28752115 NM_017846 1p35.3 Hs.533626 5

nucleotide binding

selenocysteine incorporation

RNA binding

nucleus

cytoplasm

translation

 
211984_at -0.342 10.402 -2.530 2.291e-02 0.456 -3.366 CALM1 calmodulin 1 (phosphorylase kinase, delta) 14 89933125 AI653730 14q24-q31 Hs.282410 Hs.708270 181  

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Glioma

213427_at 0.383 6.362 2.530 2.291e-02 0.456 -3.366 RPP40 ribonuclease P/MRP 40kDa subunit 6 -4940278 NM_006638 6p25.1 Hs.511756 4

ribonuclease P activity

protein binding

nucleus

nucleolar ribonuclease P complex

nucleolus

tRNA processing

hydrolase activity

 
235128_at -0.446 10.270 -2.529 2.294e-02 0.456 -3.367 SYNPO synaptopodin 5 150000412, 150000412 AI569782 5q33.1 Hs.435228 Hs.591256 Hs.714870 20

actin binding

cytoplasm

plasma membrane

tight junction

postsynaptic density

actin cytoskeleton

cell junction

cell projection

dendritic spine

perikaryon

synapse

postsynaptic membrane

 
212539_at -0.305 7.260 -2.529 2.296e-02 0.456 -3.368 CHD1L chromodomain helicase DNA binding protein 1-like 1 145180914 AI422099 1q12 Hs.191164 12

nucleotide binding

DNA binding

helicase activity

ATP binding

nucleus

ATP-dependent helicase activity

hydrolase activity

 
201910_at -0.501 7.009 -2.528 2.300e-02 0.456 -3.369 FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) 13 97593434, 97593434 BF213279 13q32.2 Hs.403917 9

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

binding

intracellular

cytoplasm

cytoskeleton

cytoskeletal protein binding

extrinsic to membrane

regulation of Rho protein signal transduction

 
227334_at 0.618 9.327 2.527 2.303e-02 0.456 -3.370 USP54 ubiquitin specific peptidase 54 10 -74927301 AW242125 10q22.2 Hs.657355 6

ubiquitin thiolesterase activity

protein binding

ubiquitin-dependent protein catabolic process

 
219655_at -0.351 6.289 -2.527 2.303e-02 0.456 -3.370 C7orf10 chromosome 7 open reading frame 10 7 40141099 NM_024728 7p14.1 Hs.586313 9

metabolic process

transferase activity

 
211961_s_at -0.377 9.232 -2.527 2.303e-02 0.456 -3.371 RAB7A RAB7A, member RAS oncogene family 3 129927668 AK000826 3q21.3 Hs.15738 Hs.716392 64

nucleotide binding

GTPase activity

protein binding

GTP binding

cytoplasm

lysosome

late endosome

Golgi apparatus

endocytosis

small GTPase mediated signal transduction

protein transport

cytoplasmic vesicle

melanosome

phagocytic vesicle

 
240770_at 0.546 2.734 2.527 2.304e-02 0.456 -3.371 TMEM171 transmembrane protein 171 5 72452143 AW058459 5q13.2 Hs.162246 5

membrane

integral to membrane

 
208897_s_at -0.339 7.006 -2.527 2.304e-02 0.456 -3.371 DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 2 118288724 BC003360 2q14.1 Hs.363492 6

nucleotide binding

RNA binding

ATP-dependent RNA helicase activity

helicase activity

ATP binding

hydrolase activity

 
212272_at -0.813 4.671 -2.527 2.305e-02 0.456 -3.371 LPIN1 lipin 1 2 11804190 AA813260 2p25.1 Hs.467740 28

molecular_function

nucleus

lipid metabolic process

phosphatidate phosphatase activity

ruffle organization

actin cytoskeleton reorganization

cellular response to insulin stimulus

regulation of fat cell differentiation

 
242851_at 0.295 5.626 2.527 2.306e-02 0.456 -3.371 KIAA1919 KIAA1919 6 111687174 BE964989 6q22 Hs.400572 5

plasma membrane

ion transport

sodium ion transport

carbohydrate transport

symporter activity

integral to membrane

sodium ion binding

 
236217_at 0.232 2.847 2.527 2.306e-02 0.456 -3.372 SLC31A1 solute carrier family 31 (copper transporters), member 1 9 115023628 AI885320 9q31-q32 Hs.532315 24

copper ion transmembrane transporter activity

copper ion binding

integral to plasma membrane

ion transport

copper ion transport

membrane

 
226878_at 0.270 5.212 2.527 2.307e-02 0.456 -3.372 HLA-DOA major histocompatibility complex, class II, DO alpha 6 -33079937, -4352783, -4157999 AL581873 6p21.3 Hs.631991 40

antigen processing and presentation of peptide or polysaccharide antigen via MHC class II

plasma membrane

plasma membrane

immune response

integral to membrane

antigen processing and presentation of exogenous peptide antigen via MHC class II

MHC class II receptor activity

MHC class II protein complex

regulation of T cell differentiation

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

201428_at -0.206 4.092 -2.526 2.310e-02 0.457 -3.373 CLDN4 claudin 4 7 72883128 NM_001305 7q11.23 Hs.647036 Hs.699253 Hs.718794 55

transmembrane receptor activity

structural molecule activity

plasma membrane

integral to plasma membrane

tight junction

pathogenesis

calcium-independent cell-cell adhesion

cell junction

identical protein binding

Cell adhesion molecules (CAMs)

Tight junction

Leukocyte transendothelial migration

222134_at -0.377 4.988 -2.526 2.311e-02 0.457 -3.374 DDO D-aspartate oxidase 6 -110820075 AL050350 6q21 Hs.591348 11

D-amino-acid oxidase activity

binding

peroxisome

aspartate catabolic process

D-aspartate oxidase activity

oxidoreductase activity

oxidation reduction

Alanine, aspartate and glutamate metabolism

213998_s_at 0.636 6.171 2.525 2.314e-02 0.457 -3.374 DDX17 DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 22 -37209388, -37209388 AW188131 22q13.1 Hs.528305 Hs.665429 Hs.719084 28

nucleotide binding

RNA binding

RNA helicase activity

ATP binding

nucleus

RNA processing

ATP-dependent helicase activity

RNA-dependent ATPase activity

hydrolase activity

 
209448_at -0.428 6.969 -2.525 2.315e-02 0.457 -3.375 HTATIP2 HIV-1 Tat interactive protein 2, 30kDa 11 20341806, 20341822, 20341864, 20341978, 20342262 BC002439 11p15.1 Hs.90753 31

RNA polymerase II transcription factor activity

transcription coactivator activity

protein binding

nucleus

nuclear envelope

cytoplasm

regulation of transcription from RNA polymerase II promoter

anti-apoptosis

induction of apoptosis

multicellular organismal development

oxidoreductase activity

cell differentiation

regulation of apoptosis

interspecies interaction between organisms

regulation of angiogenesis

nuclear import

oxidation reduction

 
216909_at 0.278 5.520 2.524 2.317e-02 0.457 -3.376 RRP12 ribosomal RNA processing 12 homolog (S. cerevisiae) 10 -99106448 AK021460 10q24.1 Hs.434251 15

protein binding

nucleus

nucleolus

membrane

integral to membrane

 
224501_at -0.378 7.785 -2.524 2.318e-02 0.457 -3.376 C1orf170 chromosome 1 open reading frame 170 1 -900441 BC006300 1p36.33 Hs.271462 2    
208869_s_at -0.479 6.940 -2.523 2.321e-02 0.457 -3.377 GABARAPL1 GABA(A) receptor-associated protein like 1 12 10256755 AF087847 12p13.2 Hs.524250 18

protein binding

intracellular

cytoplasm

autophagic vacuole

endoplasmic reticulum

Golgi apparatus

microtubule

membrane

beta-tubulin binding

GABA receptor binding

Regulation of autophagy

209936_at 0.247 5.370 2.523 2.323e-02 0.457 -3.378 RBM5 RNA binding motif protein 5 3 50101371 AF107493 3p21.3 Hs.439480 27

nucleotide binding

spliceosome assembly

regulation of alternative nuclear mRNA splicing, via spliceosome

DNA binding

mRNA binding

protein binding

intracellular

nucleus

spliceosomal complex

nucleolus

zinc ion binding

negative regulation of cell proliferation

RNA splicing

positive regulation of apoptosis

positive regulation of apoptosis

metal ion binding

 
1554892_a_at 0.229 3.218 2.523 2.324e-02 0.457 -3.378 MS4A3 membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific) 11 59580676 AY095480 11q12.1 Hs.99960 7

receptor activity

protein binding

cytoplasm

signal transduction

membrane

integral to membrane

perinuclear region of cytoplasm

 
217983_s_at 0.321 6.444 2.523 2.324e-02 0.457 -3.379 RNASET2 ribonuclease T2 6 -167262993 NM_003730 6q27 Hs.529989 11

RNA binding

endonuclease activity

ribonuclease activity

extracellular region

RNA catabolic process

hydrolase activity

ribonuclease T2 activity

 
217489_s_at 0.170 2.368 2.523 2.326e-02 0.457 -3.379 IL6R interleukin 6 receptor 1 152644292 S72848 1q21 Hs.709210 132

hepatic immune response

monocyte chemotaxis

positive regulation of leukocyte chemotaxis

receptor activity

ciliary neurotrophic factor receptor activity

interleukin-6 receptor activity

receptor binding

extracellular region

plasma membrane

interleukin-6 receptor complex

acute-phase response

integral to membrane

apical plasma membrane

enzyme binding

endocrine pancreas development

endocrine pancreas development

positive regulation of chemokine production

positive regulation of interleukin-6 production

response to cytokine stimulus

positive regulation of tyrosine phosphorylation of Stat3 protein

protein homodimerization activity

regulation of apoptosis

positive regulation of osteoblast differentiation

positive regulation of anti-apoptosis

positive regulation of smooth muscle cell proliferation

positive regulation of peptidyl-tyrosine phosphorylation

defense response to Gram-negative bacterium

interleukin-6-mediated signaling pathway

ciliary neurotrophic factor binding

ciliary neurotrophic factor-mediated signaling pathway

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

Hematopoietic cell lineage

229982_at 0.293 5.378 2.522 2.326e-02 0.457 -3.379 QSER1 glutamine and serine rich 1 11 32871367 AW195525 11p13 Hs.369368 2    
215101_s_at 0.226 3.350 2.522 2.327e-02 0.457 -3.380 CXCL5 chemokine (C-X-C motif) ligand 5 4 -75080222 BG166705 4q12-q13 Hs.89714 49

extracellular region

extracellular space

chemotaxis

immune response

signal transduction

cell-cell signaling

chemokine activity

positive regulation of cell proliferation

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

204524_at -0.202 7.350 -2.522 2.329e-02 0.457 -3.380 PDPK1 3-phosphoinositide dependent protein kinase-1 16 2527970 NM_002613 16p13.3 Hs.459691 103

nucleotide binding

3-phosphoinositide-dependent protein kinase activity

protein binding

ATP binding

cytoplasm

cytosol

plasma membrane

plasma membrane

negative regulation of protein kinase activity

intracellular signaling cascade

transferase activity

peptidyl-threonine phosphorylation

actin cytoskeleton organization

activation of protein kinase B activity

cellular response to insulin stimulus

regulation of establishment of protein localization

PPAR signaling pathway

mTOR signaling pathway

Focal adhesion

Insulin signaling pathway

Endometrial cancer

Prostate cancer

Non-small cell lung cancer

219957_at 0.369 6.834 2.522 2.329e-02 0.457 -3.380 RUFY2 RUN and FYVE domain containing 2 10 -69806955, -69773280 NM_017987 10q21.3 Hs.653144 5

nucleus

zinc ion binding

metal ion binding

 
213463_s_at -0.278 6.371 -2.522 2.329e-02 0.457 -3.380 FAM149B1 family with sequence similarity 149, member B1 10 74597882 AW300504 10q22.2 Hs.408577 4    
203605_at -0.314 7.496 -2.522 2.329e-02 0.457 -3.380 SRP54 signal recognition particle 54kDa 14 34521854 NM_003136 14q13.2 Hs.167535 15

nucleotide binding

GTPase activity

protein binding

GTP binding

nucleus

nucleolus

cytoplasm

signal recognition particle, endoplasmic reticulum targeting

SRP-dependent cotranslational protein targeting to membrane, translocation

SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition

drug binding

7S RNA binding

nuclear speck

GDP binding

endoplasmic reticulum signal peptide binding

response to drug

ribonucleoprotein binding

Protein export

223617_x_at -0.186 7.718 -2.521 2.330e-02 0.457 -3.381 ATAD3B ATPase family, AAA domain containing 3B 1 1397026 BC002542 1p36.33 Hs.23413 9

nucleotide binding

ATP binding

nucleoside-triphosphatase activity

 
220929_at 0.212 5.086 2.521 2.331e-02 0.457 -3.381 GALNT8 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8) 12 4700012 NM_017417 12p13.3 Hs.511985 2

polypeptide N-acetylgalactosaminyltransferase activity

calcium ion binding

sugar binding

Golgi apparatus

membrane

integral to membrane

transferase activity, transferring glycosyl groups

manganese ion binding

O-Glycan biosynthesis

Metabolic pathways

231382_at 0.355 4.546 2.521 2.332e-02 0.457 -3.381 FGF18 fibroblast growth factor 18 5 170779271 AI798863 5q34 Hs.87191 25

angiogenesis

intramembranous ossification

endochondral ossification

chondrocyte development

extracellular region

extracellular region

extracellular space

nucleolus

signal transduction

cell-cell signaling

growth factor activity

positive regulation of cell proliferation

fibroblast growth factor receptor signaling pathway

anatomical structure morphogenesis

lung development

positive regulation of vascular endothelial growth factor receptor signaling pathway

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

227681_at -0.201 6.124 -2.521 2.332e-02 0.457 -3.382 ZFP36L2 zinc finger protein 36, C3H type-like 2 2 -43303044 BF589368 2p22.3-p21 Hs.503093 8

nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay

transcription factor activity

RNA binding

nucleus

cytoplasm

zinc ion binding

cell proliferation

regulation of mRNA stability

metal ion binding

 
1564075_a_at 0.253 2.858 2.521 2.334e-02 0.457 -3.382 FLJ35848 hypothetical protein FLJ35848 17 40089507 AK097747 17q21.31 Hs.349758 2    
202147_s_at -0.642 7.163 -2.521 2.334e-02 0.457 -3.382 IFRD1 interferon-related developmental regulator 1 7 111850461, 111877750 NM_001550 7q22-q31 Hs.7879 23

binding

nucleus

multicellular organismal development

myoblast cell fate determination

adult somatic muscle development

muscle cell differentiation

 
201526_at 0.303 8.215 2.519 2.340e-02 0.458 -3.384 ARF5 ADP-ribosylation factor 5 7 127015752 NM_001662 7q31.3 Hs.653202 18

nucleotide binding

GTPase activity

GTP binding

intracellular

cytoplasm

Golgi apparatus

plasma membrane

small GTPase mediated signal transduction

protein transport

vesicle-mediated transport

 
200828_s_at -0.456 8.457 -2.519 2.341e-02 0.458 -3.385 ZNF207 zinc finger protein 207 17 27701269 BE871379 17q11.2 Hs.500775 7

transcription factor activity

intracellular

nucleus

nucleolus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
201408_at -0.478 9.614 -2.519 2.341e-02 0.458 -3.385 PPP1CB protein phosphatase 1, catalytic subunit, beta isoform 2 28828117, 28828129 W67887 2p23 Hs.591571 Hs.702907 42

protein serine/threonine phosphatase activity

iron ion binding

protein binding

cytoplasm

carbohydrate metabolic process

glycogen metabolic process

protein amino acid dephosphorylation

cell cycle

hydrolase activity

manganese ion binding

metal ion binding

cell division

MLL5-L complex

Vascular smooth muscle contraction

Focal adhesion

Long-term potentiation

Regulation of actin cytoskeleton

Insulin signaling pathway

1569206_at 0.303 6.172 2.519 2.343e-02 0.458 -3.386 TCP11L2 t-complex 11 (mouse)-like 2 12 105220710 BC017872 12q23.3 Hs.696047 1    
214372_x_at 0.219 7.265 2.519 2.343e-02 0.458 -3.386 ERN2 endoplasmic reticulum to nucleus signaling 2 16 -23609126 AI732416 16p12.2 Hs.592041 7

nucleotide binding

magnesium ion binding

endonuclease activity

protein serine/threonine kinase activity

ATP binding

endoplasmic reticulum

mRNA processing

protein amino acid phosphorylation

apoptosis

induction of apoptosis

response to stress

cell cycle arrest

membrane

integral to membrane

rRNA catabolic process

negative regulation of transcription

transferase activity

hydrolase activity

endoribonuclease activity, producing 5'-phosphomonoesters

 
201091_s_at -0.380 7.916 -2.519 2.343e-02 0.458 -3.386 CBX3 chromobox homolog 3 (HP1 gamma homolog, Drosophila) 7 26207623, 26207848 BE748755 7p15.2 Hs.381189 Hs.706294 45

condensed chromosome, centromeric region

chromatin

chromatin binding

nucleus

nuclear inner membrane

polytene chromosome chromocenter

nuclear euchromatin

spindle

chromatin assembly or disassembly

chromatin remodeling

negative regulation of transcription

general transcriptional repressor activity

enzyme binding

protein domain specific binding

nuclear centromeric heterochromatin

 
1554462_a_at -0.591 7.075 -2.519 2.344e-02 0.458 -3.386 DNAJB9 DnaJ (Hsp40) homolog, subfamily B, member 9 7 107997591 AF115512 14q24.2-q24.3 7q31 Hs.6790 16

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

protein folding

heat shock protein binding

unfolded protein binding

 
242442_x_at 0.317 3.570 2.518 2.345e-02 0.458 -3.386 RG9MTD2 RNA (guanine-9-) methyltransferase domain containing 2 4 -100686894, -100686894 AL515269 4q23 Hs.380412 1

methyltransferase activity

transferase activity

 
204125_at -0.466 9.234 -2.518 2.345e-02 0.458 -3.386 NDUFAF1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1 15 -39466842 NM_016013 15q11.2-q21.3 Hs.106529 11

mitochondrion

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

protein complex assembly

unfolded protein binding

 
234130_at -0.324 7.801 -2.518 2.348e-02 0.458 -3.387 LDB3 LIM domain binding 3 10 88418300, 88418405, 88418405 AL359621 10q22.3-q23.2 Hs.657271 15

protein binding

cytoplasm

cytoskeleton

zinc ion binding

Z disc

pseudopodium

metal ion binding

perinuclear region of cytoplasm

 
205549_at -0.195 4.709 -2.518 2.349e-02 0.458 -3.388 PCP4 Purkinje cell protein 4 21 40161216 NM_006198 21q22.2 Hs.80296 9

nucleus

cytosol

central nervous system development

 
241382_at 0.225 3.681 2.517 2.350e-02 0.458 -3.388 PCP4L1 Purkinje cell protein 4 like 1 1 159495140 W22165 1q23.3 Hs.433150 6    
231149_s_at -0.220 3.262 -2.517 2.350e-02 0.458 -3.388 ULK4 unc-51-like kinase 4 (C. elegans) 3 -41263093 AI828638 3p22.1 Hs.656192 7

nucleotide binding

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

transferase activity

 
219341_at 0.285 5.041 2.517 2.352e-02 0.458 -3.389 CLN8 ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation) 8 1699276 NM_018941 8p23 Hs.127675 15

age-dependent response to oxidative stress

endoplasmic reticulum

ER-Golgi intermediate compartment

phospholipid metabolic process

lipid transport

mitochondrial membrane organization

lysosome organization

nervous system development

adult walking behavior

cholesterol metabolic process

associative learning

regulation of cell size

lipid biosynthetic process

membrane

integral to membrane

spinal cord motor neuron differentiation

social behavior

negative regulation of apoptosis

cellular protein catabolic process

cellular macromolecule catabolic process

photoreceptor cell maintenance

negative regulation of proteolysis

ceramide biosynthetic process

musculoskeletal movement

neuromuscular process controlling posture

neuromuscular process controlling balance

negative regulation of transferase activity

glutamate uptake during transmission of nerve impulse

retina development in camera-type eye

neurofilament cytoskeleton organization

 
223716_s_at -0.251 9.448 -2.516 2.355e-02 0.458 -3.390 ZRANB2 zinc finger, RAN-binding domain containing 2 1 -71301561 AF065391 1p31 Hs.194718 18

transcription factor activity

RNA binding

protein binding

intracellular

nucleus

mRNA processing

zinc ion binding

RNA splicing

metal ion binding

 
219959_at 0.808 5.116 2.516 2.358e-02 0.459 -3.391 MOCOS molybdenum cofactor sulfurase 18 32021477 NM_017947 18q12 Hs.405028 10

cellular_component

Mo-molybdopterin cofactor biosynthetic process

metabolic process

Mo-molybdopterin cofactor sulfurase activity

lyase activity

molybdenum ion binding

pyridoxal phosphate binding

molybdopterin cofactor metabolic process

 
1553070_a_at -0.448 7.099 -2.516 2.358e-02 0.459 -3.391 MYOZ3 myozenin 3 5 150020596 NM_133371 5q33.1 Hs.91626 7

protein binding

cytoplasm

Z disc

 
204601_at -0.351 5.473 -2.515 2.359e-02 0.459 -3.392 N4BP1 NEDD4 binding protein 1 16 -47130137 NM_014664 16q12.1 Hs.511839 6

nucleus

 
228419_at -0.228 5.995 -2.515 2.359e-02 0.459 -3.392 METRN meteorin, glial cell differentiation regulator 16 705173 BF432260 16p13.3 Hs.533772 6

extracellular region

extracellular space

multicellular organismal development

nervous system development

glial cell differentiation

positive regulation of axonogenesis

 
238846_at 0.261 2.444 2.515 2.360e-02 0.459 -3.392 TNFRSF11A tumor necrosis factor receptor superfamily, member 11a, NFKB activator 18 58143527 AW026379 18q22.1 Hs.204044 79

receptor activity

protein binding

signal transduction

cell-cell signaling

positive regulation of cell proliferation

membrane

integral to membrane

Cytokine-cytokine receptor interaction

226967_at 0.259 6.463 2.514 2.365e-02 0.459 -3.394 FIZ1 FLT3-interacting zinc finger 1 19 -60794548 BG231981 19q13.42 Hs.515617 5

nucleic acid binding

receptor binding

intracellular

nucleus

cytoplasm

zinc ion binding

protein kinase binding

regulation of transcription

metal ion binding

 
38340_at 0.263 6.264 2.513 2.368e-02 0.459 -3.395 HIP1R huntingtin interacting protein 1 related 12 121885991 AB014555 12q24 Hs.524815 Hs.714965 19

actin binding

protein binding

cytoplasm

coated pit

receptor-mediated endocytosis

biological_process

membrane

clathrin coated vesicle membrane

cytoplasmic vesicle

phosphoinositide binding

perinuclear region of cytoplasm

 
210719_s_at -0.315 5.457 -2.513 2.368e-02 0.459 -3.395 HMG20B high-mobility group 20B 19 3523942 BC002552 19p13.3 Hs.406534 18

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

cell cycle

chromatin modification

 
1552580_at -0.174 4.358 -2.513 2.369e-02 0.459 -3.395 TRIML2 tripartite motif family-like 2 4 -189249420 NM_173553 4q35.2 Hs.276429 1    
201668_x_at 0.236 4.665 2.513 2.372e-02 0.459 -3.396 MARCKS myristoylated alanine-rich protein kinase C substrate 6 114285219 AW163148 6q22.2 Hs.519909 Hs.712721 41

protein kinase C binding

calmodulin binding

cytoplasm

centrosome

cell cortex

actin cytoskeleton

membrane

germinal vesicle

actin filament binding

Fc gamma R-mediated phagocytosis

226618_at -0.543 7.177 -2.513 2.372e-02 0.459 -3.396 FLJ25076 probable ubiquitin-conjugating enzyme E2 FLJ25076 5 6501735 AW572911 5p15.31 Hs.126856 3

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

 
220589_s_at -0.246 6.025 -2.513 2.372e-02 0.459 -3.396 ITFG2 integrin alpha FG-GAP repeat containing 2 12 2792123 NM_018463 12p13.33 Hs.446098 Hs.448720 2    
218853_s_at -0.510 7.362 -2.512 2.373e-02 0.459 -3.397 MOSPD1 motile sperm domain containing 1 X -133849327 NM_019556 Xq26.3 Hs.590789 4

structural molecule activity

membrane

integral to membrane

 
1561130_at -0.240 4.746 -2.512 2.373e-02 0.459 -3.397 C12orf51 chromosome 12 open reading frame 51 12 -111082493 AF086006 12q24.13 Hs.695995 3

intracellular

protein modification process

membrane

integral to membrane

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

 
219916_s_at 0.249 5.127 2.512 2.373e-02 0.459 -3.397 RNF39 ring finger protein 39 6 -30146021, -1486649, -1284968 NM_025236 6p21.3 Hs.121178 10

protein binding

cellular_component

cytoplasm

biological_process

zinc ion binding

metal ion binding

 
210870_s_at -0.494 7.276 -2.512 2.373e-02 0.459 -3.397 EPM2A epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) 6 -145988132 BC005286 6q24 Hs.486696 37

protein serine/threonine phosphatase activity

protein serine/threonine phosphatase activity

protein tyrosine phosphatase activity

protein tyrosine phosphatase activity

protein binding

nucleus

cytoplasm

endoplasmic reticulum

cytosol

polysome

plasma membrane

carbohydrate metabolic process

glycogen metabolic process

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

carbohydrate binding

 
202751_at -0.323 3.722 -2.512 2.374e-02 0.459 -3.397 TFIP11 tuftelin interacting protein 11 22 -25217894 NM_012143 22q12.1 Hs.20225 19

nucleic acid binding

protein binding

proteinaceous extracellular matrix

intracellular

nucleus

spliceosomal complex

cytoplasm

mRNA processing

RNA splicing

nuclear speck

biomineral formation

 
211792_s_at -0.295 6.716 -2.512 2.375e-02 0.459 -3.397 CDKN2C cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) 1 51206954, 51208229 U17074 1p32 Hs.525324 Hs.716664 45

regulation of cyclin-dependent protein kinase activity

G1/S transition of mitotic cell cycle

cyclin-dependent protein kinase inhibitor activity

protein binding

nucleus

cytoplasm

induction of apoptosis

cell cycle

cell cycle arrest

negative regulation of cell proliferation

protein kinase binding

negative regulation of cell growth

negative regulation of phosphorylation

oligodendrocyte differentiation

Cell cycle

225203_at 0.501 8.671 2.511 2.378e-02 0.459 -3.399 PPP1R16A protein phosphatase 1, regulatory (inhibitor) subunit 16A 8 145692916 AI742931 8q24.3 Hs.521937 9

protein binding

plasma membrane

 
204622_x_at -0.776 4.719 -2.511 2.380e-02 0.459 -3.399 NR4A2 nuclear receptor subfamily 4, group A, member 2 2 -156889189 NM_006186 2q22-q23 Hs.563344 76

transcription factor activity

steroid hormone receptor activity

nucleus

regulation of transcription, DNA-dependent

signal transduction

zinc ion binding

cellular response to extracellular stimulus

sequence-specific DNA binding

metal ion binding

response to protein stimulus

 
211715_s_at 0.529 7.004 2.511 2.380e-02 0.459 -3.399 BDH1 3-hydroxybutyrate dehydrogenase, type 1 3 -198721050, -198721050 BC005844 3q29 Hs.274539 11

3-hydroxybutyrate dehydrogenase activity

3-hydroxybutyrate dehydrogenase activity

binding

mitochondrion

mitochondrial inner membrane

mitochondrial matrix

mitochondrial matrix

oxidoreductase activity

oxidation reduction

Synthesis and degradation of ketone bodies

Butanoate metabolism

Metabolic pathways

223804_s_at 0.339 7.609 2.510 2.383e-02 0.459 -3.400 THUMPD3 THUMP domain containing 3 3 9379716 BC001622 3p25.3 Hs.443081 5

RNA binding

protein binding

methyltransferase activity

transferase activity

 
202190_at 0.487 5.919 2.510 2.384e-02 0.459 -3.401 CSTF1 cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa 20 54400833, 54400980, 54401113 NM_001324 20q13.2 Hs.172865 19

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

mRNA polyadenylation

mRNA cleavage

 
203857_s_at 0.326 5.307 2.510 2.384e-02 0.459 -3.401 PDIA5 protein disulfide isomerase family A, member 5 3 124268654 NM_006810 3q21.1 Hs.477352 9

protein disulfide isomerase activity

endoplasmic reticulum

endoplasmic reticulum lumen

protein folding

response to stress

oxidoreductase activity

isomerase activity

cell redox homeostasis

oxidation reduction

 
218847_at -0.294 5.262 -2.510 2.384e-02 0.459 -3.401 IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 3 -186844220 NM_006548 3q27.2 Hs.35354 55

nucleotide binding

RNA binding

protein binding

nucleus

cytoplasm

biological_process

anatomical structure morphogenesis

negative regulation of translation

regulation of cytokine biosynthetic process

cytoskeletal part

translation regulator activity

mRNA 5'-UTR binding

 
204171_at -0.290 5.842 -2.510 2.386e-02 0.459 -3.401 RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 17 55325224 NM_003161 17q23.1 Hs.463642 123

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

cytosol

protein amino acid phosphorylation

signal transduction

transferase activity

synaptosome

cell junction

synapse

ErbB signaling pathway

mTOR signaling pathway

TGF-beta signaling pathway

Fc gamma R-mediated phagocytosis

Insulin signaling pathway

Acute myeloid leukemia

202383_at -0.179 6.424 -2.510 2.386e-02 0.459 -3.402 KDM5C lysine (K)-specific demethylase 5C X -53237228 NM_004187 Xp11.22-p11.21 Hs.631768 17

molecular_function

DNA binding

iron ion binding

protein binding

cellular_component

intracellular

nucleus

biological_process

zinc ion binding

oxidoreductase activity

chromatin modification

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

regulation of transcription

metal ion binding

oxidation reduction

 
206060_s_at -0.215 3.065 -2.509 2.388e-02 0.459 -3.402 PTPN22 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) 1 -114177091, -114157962 NM_015967 1p13.3-p13.1 Hs.535276 Hs.719840 213

protein tyrosine phosphatase activity

protein binding

cytoplasm

protein amino acid dephosphorylation

signal transduction

hydrolase activity

 
1558041_a_at 0.261 5.030 2.509 2.388e-02 0.459 -3.402 KIAA0895L KIAA0895-like 16 -65767005 AL834156 16q22.1 Hs.651201 2    
226214_at -0.328 8.802 -2.509 2.388e-02 0.459 -3.402 GDE1 glycerophosphodiester phosphodiesterase 1 16 -19420515 BE677894 16p12-p11.2 Hs.512607 8

magnesium ion binding

cytoplasm

glycerol metabolic process

lipid metabolic process

glycerophosphodiester phosphodiesterase activity

membrane

integral to membrane

hydrolase activity

glycerophosphoinositol glycerophosphodiesterase activity

Glycerophospholipid metabolism

212226_s_at 0.300 8.307 2.509 2.389e-02 0.459 -3.403 PPAP2B phosphatidic acid phosphatase type 2B 1 -56733020 AA628586 1pter-p22.1 Hs.405156 Hs.715848 16

blood vessel development

gastrulation with mouth forming second

phosphoprotein phosphatase activity

Golgi apparatus

cytosol

plasma membrane

lipid metabolic process

phospholipid metabolic process

phosphatidate phosphatase activity

phosphatidate phosphatase activity

germ cell migration

integral to membrane

hydrolase activity

regulation of Wnt receptor signaling pathway

lipid phosphatase activity

Glycerolipid metabolism

Glycerophospholipid metabolism

Ether lipid metabolism

Sphingolipid metabolism

Metabolic pathways

Fc gamma R-mediated phagocytosis

203340_s_at -0.489 9.488 -2.509 2.389e-02 0.459 -3.403 SLC25A12 solute carrier family 25 (mitochondrial carrier, Aralar), member 12 2 -172348160 NM_003705 2q24 Hs.470608 27

transporter activity

L-glutamate transmembrane transporter activity

calcium ion binding

protein binding

mitochondrion

mitochondrial inner membrane

transport

L-aspartate transmembrane transporter activity

aspartate transport

L-glutamate transport

membrane

integral to membrane

malate-aspartate shuttle

response to calcium ion

 
220349_s_at 0.316 7.377 2.509 2.390e-02 0.459 -3.403 ENGASE endo-beta-N-acetylglucosaminidase 17 74582613 NM_022759 17q25.3 Hs.29288 5

intracellular

cytoplasm

cytosol

metabolic process

hydrolase activity, acting on glycosyl bonds

mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity

Other glycan degradation

223538_at 0.428 7.560 2.509 2.391e-02 0.459 -3.403 SERF1A small EDRK-rich factor 1A (telomeric) 5 69356827, 69356827, 70232245, 70232245, -510079, -499652 AF073518 5q12.2-q13.3 Hs.559428 7    
233197_at 0.343 4.984 2.509 2.391e-02 0.459 -3.403 KLHL9 kelch-like 9 (Drosophila) 9 -21321017 AK022805 9p22 Hs.522029 Hs.701778 Hs.710126 4

protein binding

modification-dependent protein catabolic process

Ubiquitin mediated proteolysis

212631_at -0.307 6.848 -2.507 2.397e-02 0.459 -3.405 STX7 syntaxin 7 6 -132820355 AI566082 6q23.1 Hs.593148 Hs.605992 31

SNAP receptor activity

endosome

Golgi apparatus

intracellular protein transport

post-Golgi vesicle-mediated transport

membrane

integral to membrane

vesicle-mediated transport

SNARE interactions in vesicular transport

240172_at -0.510 5.537 -2.507 2.397e-02 0.459 -3.406 ERGIC2 ERGIC and golgi 2 12 -29384845 AA102332 12p11.22 Hs.339453 11

nucleus

cytoplasm

endoplasmic reticulum

Golgi apparatus

membrane

integral to membrane

vesicle-mediated transport

 
207253_s_at -0.240 7.180 -2.507 2.399e-02 0.459 -3.406 UBN1 ubinuclein 1 16 4837912, 4842077 NM_016936 16p13.3 Hs.440219 9

transcription factor activity

nucleus

nucleoplasm

tight junction

regulation of transcription from RNA polymerase II promoter

chromatin modification

cell junction

interspecies interaction between organisms

 
202799_at 0.266 8.734 2.506 2.401e-02 0.459 -3.407 CLPP ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli) 19 6312462 NM_006012 19p13.3 Hs.515092 9

nucleotide binding

serine-type endopeptidase activity

protein binding

ATP binding

mitochondrion

proteolysis

peptidase activity

 
204223_at 0.388 5.014 2.506 2.403e-02 0.460 -3.408 PRELP proline/arginine-rich end leucine-rich repeat protein 1 201711505 NM_002725 1q32 Hs.632481 13

skeletal system development

extracellular matrix structural constituent

protein binding

extracellular region

proteinaceous extracellular matrix

cell aging

 
1558738_at -0.415 6.280 -2.506 2.405e-02 0.460 -3.409 NOL3 nucleolar protein 3 (apoptosis repressor with CARD domain) 16 65765370 BU785956 16q21-q23 Hs.513667 22

RNA binding

intracellular

nucleus

nucleolus

cytoplasm

cytosol

mRNA processing

anti-apoptosis

RNA splicing

identical protein binding

regulation of apoptosis

 
224931_at -0.265 7.334 -2.505 2.406e-02 0.460 -3.409 SLC41A3 solute carrier family 41, member 3 3 -127207889, -127207889 AK021925 3q21.2-q21.3 Hs.573007 5

plasma membrane

cation transport

cation transmembrane transporter activity

integral to membrane

 
209405_s_at -0.195 6.076 -2.505 2.407e-02 0.460 -3.409 FAM3A family with sequence similarity 3, member A X -153387699 BC002934 Xq28 Hs.289108 7

molecular_function

extracellular region

biological_process

 
208823_s_at -0.278 6.695 -2.505 2.408e-02 0.460 -3.410 PCTK1 PCTAIRE protein kinase 1 X 46962471, 46963058 BE787860 Xp11.3-p11.23 Hs.496068 24

nucleotide binding

cyclin-dependent protein kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

transferase activity

 
224874_at -0.384 7.384 -2.505 2.408e-02 0.460 -3.410 POLR1D polymerase (RNA) I polypeptide D, 16kDa 13 27094002, 27094028 N32181 13q12.2 Hs.507584 15

DNA binding

DNA-directed RNA polymerase activity

nucleus

nucleoplasm

transcription

protein dimerization activity

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

241779_at 0.254 5.699 2.505 2.410e-02 0.460 -3.410 MTX3 metaxin 3 5 -79308294 BE898126 5q14.1 Hs.531418 3

mitochondrion

mitochondrial outer membrane

protein targeting to mitochondrion

protein transport

membrane

 
202006_at -0.298 7.549 -2.504 2.411e-02 0.460 -3.411 PTPN12 protein tyrosine phosphatase, non-receptor type 12 7 77004708, 77005287 NM_002835 7q11.23 Hs.61812 53

non-membrane spanning protein tyrosine phosphatase activity

protein binding

soluble fraction

cytoplasm

cytosol

protein amino acid dephosphorylation

hydrolase activity

SH3 domain binding

 
208946_s_at -0.372 8.279 -2.504 2.412e-02 0.460 -3.411 BECN1 beclin 1, autophagy related 17 -38215675 AF139131 17q21 Hs.716464 56

protein binding

cytoplasm

Golgi apparatus

trans-Golgi network

autophagy

anti-apoptosis

cellular defense response

negative regulation of cell proliferation

response to virus

membrane

cytoplasmic membrane-bounded vesicle

positive regulation of macroautophagy

protein complex

Regulation of autophagy

230563_at 0.516 4.497 2.504 2.412e-02 0.460 -3.411 RASGEF1A RasGEF domain family, member 1A 10 -43009989 BF446578 10q11.21 Hs.125293 4

guanyl-nucleotide exchange factor activity

intracellular

regulation of small GTPase mediated signal transduction

 
228950_s_at -0.444 4.267 -2.504 2.412e-02 0.460 -3.411 GPR177 G protein-coupled receptor 177 1 -68363628, -68336738 AL534095 1p31.3 Hs.647659 8

signal transducer activity

membrane

integral to membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

 
202696_at -0.271 8.252 -2.504 2.415e-02 0.460 -3.412 OXSR1 oxidative-stress responsive 1 3 38182029 NM_005109 3p22-p21.3 Hs.475970 21

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

response to oxidative stress

protein kinase cascade

transferase activity

identical protein binding

 
206601_s_at 0.251 3.310 2.503 2.416e-02 0.460 -3.412 HOXD3 homeobox D3 2 176737050 BC005124 2q31.1 Hs.93574 25

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anterior/posterior pattern formation

glossopharyngeal nerve morphogenesis

thyroid gland development

sequence-specific DNA binding

positive regulation of neuron differentiation

embryonic skeletal system morphogenesis

cartilage development

 
34210_at 0.366 3.347 2.503 2.417e-02 0.460 -3.413 CD52 CD52 molecule 1 26516997 N90866 1p36 Hs.276770 27

membrane fraction

plasma membrane

integral to plasma membrane

elevation of cytosolic calcium ion concentration

anchored to membrane

respiratory burst

 
210942_s_at -1.203 4.696 -2.503 2.418e-02 0.460 -3.413 ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 3 99934261 AB022918 3q12.1 Hs.148716 5

Golgi apparatus

amino sugar metabolic process

protein amino acid glycosylation

glycolipid metabolic process

sialyltransferase activity

protein lipoylation

membrane

integral to membrane

integral to Golgi membrane

Glycosphingolipid biosynthesis - lacto and neolacto series

Metabolic pathways

218630_at 0.176 5.884 2.503 2.418e-02 0.460 -3.413 MKS1 Meckel syndrome, type 1 17 -53637796 NM_017777 17q22 Hs.408843 13    
206366_x_at 0.217 4.333 2.503 2.419e-02 0.460 -3.414 XCL1 chemokine (C motif) ligand 1 1 166812479 U23772 1q23 Hs.546295 39

extracellular region

extracellular space

cellular calcium ion homeostasis

chemotaxis

immune response

signal transduction

cell-cell signaling

chemokine activity

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

238902_at 0.375 6.656 2.503 2.420e-02 0.460 -3.414 PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 8 -52892692 T85248 8q11.23 Hs.308480 3

protein-L-isoaspartate (D-aspartate) O-methyltransferase activity

cytoplasm

protein modification process

 
214669_x_at 0.354 5.412 2.502 2.422e-02 0.460 -3.415 IGKC immunoglobulin kappa constant 2   BG485135 2p12 Hs.449621 Hs.703932 31

antigen binding

protein binding

extracellular region

extracellular region

immune response

 
218358_at 0.311 7.095 2.502 2.422e-02 0.460 -3.415 CRELD2 cysteine-rich with EGF-like domains 2 22 48698286 NM_024324 22q13.33 Hs.211282 9

calcium ion binding

extracellular region

endoplasmic reticulum

 
208093_s_at -0.272 7.737 -2.502 2.423e-02 0.460 -3.415 NDEL1 nudE nuclear distribution gene E homolog (A. nidulans)-like 1 17 8279903 NM_030808 17p13.1 Hs.372123 38

condensed chromosome kinetochore

protein binding

cytoplasm

centrosome

spindle

cytoskeleton

microtubule

transport

chromosome segregation

multicellular organismal development

nervous system development

cell differentiation

 
213935_at 0.251 6.708 2.502 2.423e-02 0.460 -3.415 ABHD5 abhydrolase domain containing 5 3 43707378 AF007132 3p21 Hs.19385 14

1-acylglycerol-3-phosphate O-acyltransferase activity

triacylglycerol lipase activity

protein binding

cytoplasm

cytosol

lipid metabolic process

fatty acid metabolic process

phosphatidic acid biosynthetic process

phospholipid biosynthetic process

negative regulation of sequestering of triglyceride

positive regulation of triglyceride catabolic process

monolayer-surrounded lipid storage body

transferase activity

hydrolase activity

cell differentiation

lysophosphatidic acid acyltransferase activity

 
1552482_at 0.195 2.332 2.502 2.424e-02 0.460 -3.415 RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 2 -204014436, -204006783 NM_025252 2q33 Hs.471162 13

nucleus

cytoplasm

cytoskeleton

plasma membrane

cell-matrix adhesion

signal transduction

lamellipodium

filopodium

 
244504_x_at -0.192 5.604 -2.500 2.430e-02 0.461 -3.418 ARF1 ADP-ribosylation factor 1 1 226336983, 226337473 AW139048 1q42 Hs.286221 97

Golgi membrane

nucleotide binding

GTPase activity

receptor signaling protein activity

protein binding

GTP binding

intracellular

Golgi apparatus

cytosol

cytosol

plasma membrane

retrograde vesicle-mediated transport, Golgi to ER

small GTPase mediated signal transduction

protein transport

membrane organization

vesicle-mediated transport

sarcomere

COPI coating of Golgi vesicle

Vibrio cholerae infection

225545_at -0.726 9.032 -2.500 2.431e-02 0.461 -3.418 EEF2K eukaryotic elongation factor-2 kinase 16 22125092 BF001312 16p12.2 Hs.498892 22

nucleotide binding

protein serine/threonine kinase activity

elongation factor-2 kinase activity

calcium ion binding

calmodulin binding

ATP binding

cytoplasm

cytosol

translational elongation

protein amino acid phosphorylation

translation factor activity, nucleic acid binding

transferase activity

 
218129_s_at -0.458 6.516 -2.500 2.432e-02 0.461 -3.418 NFYB nuclear transcription factor Y, beta 12 -103034987 NM_006166 12q22-q23 Hs.84928 38

transcription factor activity

protein binding

intracellular

nucleus

CCAAT-binding factor complex

sequence-specific DNA binding

positive regulation of transcription, DNA-dependent

Antigen processing and presentation

233589_x_at -0.237 6.070 -2.499 2.436e-02 0.461 -3.420 C9orf167 chromosome 9 open reading frame 167 9 139292100 AK000392 9q34.3 Hs.495541 1

nucleotide binding

ATP binding

endoplasmic reticulum

membrane

integral to membrane

nucleoside-triphosphatase activity

chaperone mediated protein folding requiring cofactor

 
224804_s_at 0.230 7.498 2.499 2.436e-02 0.461 -3.420 C15orf17 chromosome 15 open reading frame 17 15 -72979380 AU152410 15q24.1 Hs.367690 4    
205445_at 0.277 4.081 2.499 2.437e-02 0.461 -3.420 PRL prolactin 6 -22395457, -22395456 NM_000948 6p22.2-p21.3 Hs.1905 118

prolactin receptor binding

hormone activity

extracellular region

cell surface receptor linked signal transduction

female pregnancy

lactation

cell proliferation

regulation of multicellular organism growth

positive regulation of JAK-STAT cascade

Cytokine-cytokine receptor interaction

Neuroactive ligand-receptor interaction

Jak-STAT signaling pathway

216389_s_at 0.280 6.333 2.499 2.438e-02 0.461 -3.421 DCAF11 DDB1 and CUL4 associated factor 11 14 23653745, 23653825, 23654331, 23654333 AF283773 14q11.2 Hs.525251 9

protein binding

 
210378_s_at -0.186 7.301 -2.499 2.439e-02 0.461 -3.421 SSNA1 Sjogren syndrome nuclear autoantigen 1 9 139202874 BC004118 9q34.3 Hs.530314 6

nucleus

centrosome

identical protein binding

 
210632_s_at -0.395 9.118 -2.498 2.441e-02 0.461 -3.422 SGCA sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein) 17 45598364 L35853 17q21 Hs.463412 23

calcium ion binding

protein binding

cytoplasm

cytoskeleton

muscle contraction

muscle organ development

dystrophin-associated glycoprotein complex

sarcoglycan complex

integral to membrane

sarcolemma

membrane raft

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

204440_at 0.260 5.614 2.497 2.445e-02 0.461 -3.423 CD83 CD83 molecule 6 14225843 NM_004233 6p23 Hs.595133 44

plasma membrane

integral to plasma membrane

defense response

humoral immune response

signal transduction

external side of plasma membrane

response to organic cyclic substance

negative regulation of interleukin-4 production

positive regulation of interleukin-10 production

positive regulation of interleukin-2 production

positive regulation of CD4-positive, alpha beta T cell differentiation

 
204077_x_at 0.208 5.433 2.497 2.445e-02 0.461 -3.423 ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 8 -23345516, -23345516 NM_004901 8p21.3-p21.2 Hs.444389 8

magnesium ion binding

calcium ion binding

Golgi apparatus

UDP catabolic process

membrane

integral to membrane

hydrolase activity

integral to Golgi membrane

cytoplasmic vesicle

uridine-diphosphatase activity

Purine metabolism

Pyrimidine metabolism

Lysosome

225477_s_at -0.314 7.335 -2.497 2.445e-02 0.461 -3.423 NR2C2 nuclear receptor subfamily 2, group C, member 2 3 14964239 AL138444 3p25 Hs.555973 22

transcription factor activity

steroid hormone receptor activity

transcription coactivator activity

nucleus

nucleolus

regulation of transcription, DNA-dependent

nervous system development

zinc ion binding

sequence-specific DNA binding

metal ion binding

spermatocyte division

 
229113_s_at 0.340 5.894 2.497 2.448e-02 0.461 -3.424 C1orf86 chromosome 1 open reading frame 86 1 -2110847 W16779 1p36.33 Hs.107101 Hs.719244 5    
203409_at 0.289 5.218 2.497 2.448e-02 0.461 -3.424 DDB2 damage-specific DNA binding protein 2, 48kDa 11 47193068 NM_000107 11p12-p11 Hs.700338 52

protein polyubiquitination

nucleotide-excision repair, DNA damage removal

damaged DNA binding

ubiquitin-protein ligase activity

protein binding

nucleus

nucleoplasm

pyrimidine dimer repair

response to DNA damage stimulus

response to UV

modification-dependent protein catabolic process

protein complex

protein autoubiquitination

Nucleotide excision repair

p53 signaling pathway

Ubiquitin mediated proteolysis

1567270_at -0.234 4.108 -2.497 2.448e-02 0.461 -3.424 OR4C1P olfactory receptor, family 4, subfamily C, member 1 pseudogene 11   X64985 11q11 Hs.550274 1    
219219_at 0.321 7.029 2.496 2.450e-02 0.462 -3.425 TMEM160 transmembrane protein 160 19 -52241006 NM_017854 19q13.32 Hs.105606 3

membrane

integral to membrane

 
1565661_x_at 0.275 5.480 2.496 2.450e-02 0.462 -3.425 FUT6 fucosyltransferase 6 (alpha (1,3) fucosyltransferase) 19 -5781636 BC040472 19p13.3 Hs.631846 Hs.705615 19

Golgi apparatus

protein amino acid glycosylation

membrane

integral to membrane

transferase activity, transferring glycosyl groups

3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase activity

L-fucose catabolic process

alpha(1,3)-fucosyltransferase activity

Glycosphingolipid biosynthesis - lacto and neolacto series

Metabolic pathways

218188_s_at -0.298 8.185 -2.496 2.452e-02 0.462 -3.425 TIMM13 translocase of inner mitochondrial membrane 13 homolog (yeast) 19 -2376621 NM_012458 19p13.3 Hs.75056 16

protein binding

mitochondrion

mitochondrial inner membrane presequence translocase complex

sensory perception of sound

zinc ion binding

protein transport

membrane

mitochondrial intermembrane space protein transporter complex

protein import into mitochondrial inner membrane

metal ion binding

intracellular protein transmembrane transport

 
32042_at -0.233 4.272 -2.496 2.453e-02 0.462 -3.426 ENOX2 ecto-NOX disulfide-thiol exchanger 2 X -129585037 S72904 Xq25-q26.2 Hs.171458 22

nucleotide binding

nucleic acid binding

copper ion binding

extracellular region

extracellular space

nucleus

cytoplasm

cytosol

cytoskeleton

plasma membrane

transport

ultradian rhythm

external side of plasma membrane

protein disulfide oxidoreductase activity

cell growth

oxidoreductase activity

electron transport chain

regulation of growth

 
221516_s_at 0.208 7.080 2.494 2.459e-02 0.462 -3.428 SMCR7L Smith-Magenis syndrome chromosome region, candidate 7-like 22 38228229 BC002587 22q13 Hs.718449 11

mitochondrion

membrane

integral to membrane

 
209604_s_at 0.292 5.927 2.494 2.459e-02 0.462 -3.428 GATA3 GATA binding protein 3 10 8136672 BC003070 10p15 Hs.524134 92

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

defense response

transcription factor binding

zinc ion binding

anatomical structure morphogenesis

sequence-specific DNA binding

response to estrogen stimulus

metal ion binding

 
227994_x_at 0.445 8.313 2.494 2.459e-02 0.462 -3.428 PPDPF pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish) 20 61622576 AA548838 20q13.33 Hs.79625 3

multicellular organismal development

cell differentiation

 
223339_at 0.331 7.497 2.494 2.463e-02 0.462 -3.429 ATPIF1 ATPase inhibitory factor 1 1 28435197 BC001867   Hs.590908 13

angiogenesis

negative regulation of endothelial cell proliferation

calmodulin binding

mitochondrion

mitochondrion

mitochondrial proton-transporting ATP synthase complex

generation of precursor metabolites and energy

cell surface

ATPase inhibitor activity

ATPase inhibitor activity

protein homodimerization activity

angiostatin binding

negative regulation of nucleotide metabolic process

ATPase binding

ATPase binding

protein homotetramerization

negative regulation of hydrolase activity

negative regulation of hydrolase activity

 
228318_s_at 0.363 6.745 2.493 2.464e-02 0.462 -3.430 CRIPAK cysteine-rich PAK1 inhibitor 4 1375339 AI356283 4p16.3 Hs.26410 3

protein binding

nucleus

cytoplasm

endoplasmic reticulum

plasma membrane

negative regulation of protein kinase activity

ER-nuclear signaling pathway

response to estrogen stimulus

regulation of cytoskeleton organization

 
230737_s_at 0.217 4.357 2.493 2.465e-02 0.463 -3.430 LOC387647 patched domain containing 3 pseudogene 10 29738506 AW118878 10p11.23 Hs.719271 2    
204431_at -0.248 6.607 -2.493 2.468e-02 0.463 -3.431 TLE2 transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila) 19 -2948636, -2948636, -2948636 NM_003260 19p13.3 Hs.332173 15

protein binding

nucleus

signal transduction

organ morphogenesis

Wnt receptor signaling pathway

regulation of transcription

 
226029_at 0.280 4.077 2.493 2.468e-02 0.463 -3.431 VANGL2 vang-like 2 (van gogh, Drosophila) 1 158636990 AB033041 1q22-q23 Hs.99477 8

establishment of planar polarity

neural tube closure

heart looping

multicellular organismal development

membrane

integral to membrane

sensory cilium assembly

apical protein localization

Wnt signaling pathway

209896_s_at -0.790 6.546 -2.492 2.468e-02 0.463 -3.431 PTPN11 protein tyrosine phosphatase, non-receptor type 11 12 111340918 AF119855 12q24 Hs.506852 Hs.646231 326

non-membrane spanning protein tyrosine phosphatase activity

non-membrane spanning protein tyrosine phosphatase activity

protein binding

cytoplasm

cytosol

protein amino acid dephosphorylation

signal transduction

hydrolase activity

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Adipocytokine signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

Renal cell carcinoma

Chronic myeloid leukemia

210791_s_at -0.357 5.020 -2.492 2.470e-02 0.463 -3.432 RICS Rho GTPase-activating protein 11 -128340165, -128340165 BC000277 11q24-q25 Hs.440379 17

Golgi membrane

GTPase activator activity

protein binding

intracellular

cytoplasm

endosome

endoplasmic reticulum

endoplasmic reticulum membrane

Golgi apparatus

plasma membrane

cell cortex

signal transduction

endosome membrane

postsynaptic density

cell junction

phosphoinositide binding

cell projection

dendritic spine

synapse

postsynaptic membrane

 
210828_s_at -0.190 4.339 -2.492 2.472e-02 0.463 -3.433 ARNT aryl hydrocarbon receptor nuclear translocator 1 -149048809 AF001307 1q21 Hs.632446 88

response to hypoxia

positive regulation of endothelial cell proliferation

RNA polymerase II transcription factor activity, enhancer binding

transcription coactivator activity

signal transducer activity

nucleus

regulation of transcription, DNA-dependent

signal transduction

positive regulation vascular endothelial growth factor production

aryl hydrocarbon receptor binding

positive regulation of vascular endothelial growth factor receptor signaling pathway

mRNA transcription from RNA polymerase II promoter

positive regulation of gene-specific transcription

sequence-specific DNA binding

regulation of transcription from RNA polymerase II promoter in response to oxidative stress

positive regulation of erythrocyte differentiation

positive regulation of glycolysis

positive regulation of hormone biosynthetic process

protein heterodimerization activity

Pathways in cancer

Renal cell carcinoma

203244_at -0.275 8.432 -2.491 2.474e-02 0.463 -3.433 PEX5 peroxisomal biogenesis factor 5 12 7233025, 7233548, 7234224 NM_000319 12p13.31 Hs.567327 45

protein binding

cytoplasm

peroxisome

protein transport

membrane

 
215529_x_at 0.259 7.376 2.490 2.479e-02 0.464 -3.435 DIP2A DIP2 disco-interacting protein 2 homolog A (Drosophila) 21 46703289, 46703289, 46703289, 46703289, 46703289 AI590053 21q22.3 Hs.189585 11

catalytic activity

nucleus

multicellular organismal development

transcription factor binding

metabolic process

 
219520_s_at 0.247 7.080 2.490 2.481e-02 0.464 -3.436 WWC3 WWC family member 3 X 9943794 NM_018458 Xp22.32 Hs.527524 5    
1561042_at 0.463 4.227 2.490 2.482e-02 0.464 -3.436 ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 10 -33236244, -33229251, -33229251, -33229251 AF086249 10p11.2 Hs.643813 512

G1/S transition of mitotic cell cycle

in utero embryonic development

cell fate specification

receptor activity

integrin binding

focal adhesion

cellular defense response

cell adhesion

homophilic cell adhesion

leukocyte adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

positive regulation of cell proliferation

integrin complex

germ cell migration

cell surface

integral to membrane

synaptosome

B cell differentiation

neuromuscular junction

ruffle membrane

cell-cell adhesion mediated by integrin

sarcolemma

melanosome

identical protein binding

interspecies interaction between organisms

sarcomere organization

negative regulation of cell differentiation

protein heterodimerization activity

regulation of cell cycle

cardiac muscle cell differentiation

Axon guidance

Focal adhesion

ECM-receptor interaction

Cell adhesion molecules (CAMs)

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Pathogenic Escherichia coli infection - EHEC

Pathways in cancer

Small cell lung cancer

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

203761_at 0.329 5.123 2.490 2.482e-02 0.464 -3.436 SLA Src-like-adaptor 8 -134118154, -134118154 NM_006748 8q22.3-qter 8q24 Hs.75367 15

SH3/SH2 adaptor activity

protein binding

cytoplasm

endosome

 
213548_s_at -0.347 3.981 -2.489 2.485e-02 0.464 -3.437 CDV3 CDV3 homolog (mouse) 3 134775123, 134775990 BG257762 3q22.1 Hs.518265 11

molecular_function

cellular_component

cytoplasm

cell proliferation

 
223585_x_at -0.592 5.827 -2.488 2.489e-02 0.465 -3.438 KBTBD2 kelch repeat and BTB (POZ) domain containing 2 7 -32874302 AF151831 7p14.3 Hs.372541 4

protein binding

 
213570_at 0.252 5.014 2.488 2.492e-02 0.465 -3.440 EIF4E2 eukaryotic translation initiation factor 4E family member 2 2 233123600 BF516289 2q37.1 Hs.292026 Hs.700929 15

RNA cap binding

translation initiation factor activity

protein binding

cytoplasm

translational initiation

regulation of translation

mTOR signaling pathway

Insulin signaling pathway

208640_at -0.272 10.558 -2.487 2.495e-02 0.465 -3.441 RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 7 6380650 BG292367 7p22 Hs.413812 406

nucleotide binding

GTPase activity

GTP binding

intracellular

cytosol

plasma membrane

cell motion

inflammatory response

cell adhesion

small GTPase mediated signal transduction

anatomical structure morphogenesis

regulation of hydrogen peroxide metabolic process

positive regulation of lamellipodium assembly

enzyme binding

actin filament polymerization

GTP-dependent protein binding

ruffle organization

positive regulation of Rho protein signal transduction

melanosome

negative regulation of receptor-mediated endocytosis

localization within membrane

regulation of respiratory burst

MAPK signaling pathway

Chemokine signaling pathway

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Focal adhesion

Adherens junction

Toll-like receptor signaling pathway

Natural killer cell mediated cytotoxicity

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Amyotrophic lateral sclerosis (ALS)

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

1567458_s_at -0.573 7.595 -2.487 2.498e-02 0.465 -3.442 RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 7 6380650 AJ012502 7p22 Hs.413812 406

nucleotide binding

GTPase activity

GTP binding

intracellular

cytosol

plasma membrane

cell motion

inflammatory response

cell adhesion

small GTPase mediated signal transduction

anatomical structure morphogenesis

regulation of hydrogen peroxide metabolic process

positive regulation of lamellipodium assembly

enzyme binding

actin filament polymerization

GTP-dependent protein binding

ruffle organization

positive regulation of Rho protein signal transduction

melanosome

negative regulation of receptor-mediated endocytosis

localization within membrane

regulation of respiratory burst

MAPK signaling pathway

Chemokine signaling pathway

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Focal adhesion

Adherens junction

Toll-like receptor signaling pathway

Natural killer cell mediated cytotoxicity

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Amyotrophic lateral sclerosis (ALS)

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

1557642_at 0.191 2.092 2.486 2.498e-02 0.465 -3.442 LOC100129258 hypothetical protein LOC100129258 2   AK090907 2q37.2 Hs.591594 1    
202747_s_at 0.346 8.325 2.486 2.499e-02 0.465 -3.442 ITM2A integral membrane protein 2A X -78502536 NM_004867 Xq13.3-Xq21.2 Hs.17109 Hs.694944 14

cytoplasm

plasma membrane

integral to membrane

 
1552727_s_at 0.425 3.998 2.486 2.499e-02 0.465 -3.442 ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif, 17 15 -98329165 AA022668 15q24 Hs.513200 5

metalloendopeptidase activity

extracellular region

proteinaceous extracellular matrix

proteolysis

peptidase activity

zinc ion binding

metal ion binding

 
241393_at 0.312 6.009 2.486 2.500e-02 0.465 -3.442 IPP intracisternal A particle-promoted polypeptide 1 -45936995, -45932586 R78604 1p34-p32 Hs.699548 8

actin binding

protein binding

cytoplasm

actin cytoskeleton

 
219060_at 0.343 7.382 2.486 2.501e-02 0.465 -3.443 WDYHV1 WDYHV motif containing 1 8 124498145 NM_018024 8q24.13 Hs.18029 7

protein binding

nucleus

cytosol

protein modification process

protein N-terminal glutamine amidohydrolase activity

 
205332_at -0.213 5.443 -2.486 2.502e-02 0.465 -3.443 RCE1 RCE1 homolog, prenyl protein peptidase (S. cerevisiae) 11 66367458 AF121951 11q13 Hs.654972 9

metalloendopeptidase activity

endoplasmic reticulum

integral to plasma membrane

proteolysis

membrane

hydrolase activity

 
202948_at 0.402 5.509 2.486 2.503e-02 0.465 -3.443 IL1R1 interleukin 1 receptor, type I 2 102136833 NM_000877 2q12 Hs.701982 160

transmembrane receptor activity

interleukin-1, Type I, activating receptor activity

platelet-derived growth factor receptor binding

protein binding

integral to plasma membrane

cell surface receptor linked signal transduction

membrane

innate immune response

interleukin-1-mediated signaling pathway

response to interleukin-1

MAPK signaling pathway

Cytokine-cytokine receptor interaction

Apoptosis

Hematopoietic cell lineage

212237_at -0.351 6.826 -2.485 2.503e-02 0.465 -3.444 ASXL1 additional sex combs like 1 (Drosophila) 20 30409813 N64780 20q11.1 Hs.374043 13

protein binding

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
230409_at 0.238 4.023 2.484 2.508e-02 0.466 -3.445 MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 1 113734997, 113734997 AI738585 1p12-p11.2 Hs.486189 13

nucleotide binding

protein binding

ATP binding

nucleus

plasma membrane

tight junction

cell junction

interspecies interaction between organisms

Tight junction

203740_at 0.362 7.753 2.484 2.512e-02 0.466 -3.446 MPHOSPH6 M-phase phosphoprotein 6 16 -80739267 NM_005792 16q23.3 Hs.344400 11

M phase of mitotic cell cycle

protein binding

nucleus

nucleolus

cytoplasm

RNA degradation

226140_s_at -1.136 7.548 -2.484 2.512e-02 0.466 -3.447 OTUD1 OTU domain containing 1 10 23768203 AI934347 10p12.2 Hs.499042 4    
205357_s_at -0.315 6.117 -2.483 2.516e-02 0.466 -3.448 AGTR1 angiotensin II receptor, type 1 3 149898347, 149930656 NM_000685 3q21-q25 Hs.477887 Hs.719071 524

regulation of cell growth

angiotensin type I receptor activity

angiotensin type I receptor activity

kidney development

renin-angiotensin regulation of aldosterone production

regulation of blood vessel size by renin-angiotensin

regulation of natriuresis

receptor activity

G-protein coupled receptor activity

angiotensin type II receptor activity

plasma membrane

integral to plasma membrane

oxygen and reactive oxygen species metabolic process

signal transduction

acetyltransferase activator activity

positive regulation of foam cell differentiation

positive regulation of cholesterol esterification

regulation of vasoconstriction

regulation of vasoconstriction

regulation of vasoconstriction

calcium-mediated signaling

bradykinin receptor binding

positive regulation of cellular protein metabolic process

positive regulation of phospholipase A2 activity

positive regulation of NAD(P)H oxidase activity

low-density lipoprotein particle remodeling

regulation of cell proliferation

regulation of vasodilation

protein heterodimerization activity

positive regulation of inflammatory response

elevation of cytosolic calcium ion concentration during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)

Calcium signaling pathway

Neuroactive ligand-receptor interaction

Vascular smooth muscle contraction

Renin-angiotensin system

233558_s_at -0.440 5.746 -2.482 2.519e-02 0.466 -3.449 C4orf41 chromosome 4 open reading frame 41 4 184817439 AK023390 4q35.1 Hs.443240 6    
201588_at -0.192 10.440 -2.482 2.520e-02 0.466 -3.449 TXNL1 thioredoxin-like 1 18 -52421050 NM_004786 18q21.31 Hs.114412 15

cytoplasm

transport

disulfide oxidoreductase activity

electron transport chain

cell redox homeostasis

 
237515_at -0.932 6.341 -2.482 2.521e-02 0.466 -3.450 TMEM56 transmembrane protein 56 1 95355481 AA054642 1p21.3 Hs.483512 3

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
210805_x_at -0.186 3.581 -2.482 2.522e-02 0.466 -3.450 RUNX1 runt-related transcription factor 1 21 -35115443, -35081967, -35081967 U19601 21q22.3 Hs.149261 Hs.612648 256

transcription factor activity

protein binding

ATP binding

nucleus

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

transcription activator activity

positive regulation of granulocyte differentiation

chloride ion binding

positive regulation of angiogenesis

positive regulation of transcription from RNA polymerase II promoter

Pathways in cancer

Chronic myeloid leukemia

Acute myeloid leukemia

203095_at -0.300 8.767 -2.481 2.524e-02 0.466 -3.451 MTIF2 mitochondrial translational initiation factor 2 2 -55317259, -55317259 NM_002453 2p14-p16 Hs.149894 10

nucleotide binding

translation initiation factor activity

GTPase activity

GTP binding

intracellular

mitochondrion

regulation of translational initiation

ribosomal small subunit binding

 
209847_at 0.423 4.730 2.481 2.524e-02 0.466 -3.451 CDH17 cadherin 17, LI cadherin (liver-intestine) 8 -95208569, -95208569 U07969 8q22.1 Hs.591853 20

transporter activity

proton-dependent oligopeptide secondary active transmembrane transporter activity

calcium ion binding

protein binding

plasma membrane

transport

oligopeptide transport

cell adhesion

homophilic cell adhesion

integral to membrane

basolateral plasma membrane

calcium-dependent cell-cell adhesion

 
213392_at -0.289 6.354 -2.481 2.524e-02 0.466 -3.451 IQCK IQ motif containing K 16 19635278 AW070229 16p12.3 Hs.460217 6    
203821_at -0.416 7.604 -2.481 2.524e-02 0.466 -3.451 HBEGF heparin-binding EGF-like growth factor 5 -139692611 NM_001945 5q23 Hs.592942 Hs.799 98

receptor activity

epidermal growth factor receptor binding

extracellular region

extracellular space

plasma membrane

integral to plasma membrane

signal transduction

epidermal growth factor receptor signaling pathway

muscle organ development

regulation of heart contraction

growth factor activity

heparin binding

cell surface

wound healing, spreading of epidermal cells

positive regulation of smooth muscle cell proliferation

positive regulation of keratinocyte migration

ErbB signaling pathway

GnRH signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

231859_at -0.269 4.943 -2.481 2.524e-02 0.466 -3.451 C14orf132 chromosome 14 open reading frame 132 14 95575414 AK025915 14q32.2 Hs.6434 6

membrane

integral to membrane

 
210820_x_at -0.226 6.603 -2.481 2.526e-02 0.466 -3.451 COQ7 coenzyme Q7 homolog, ubiquinone (yeast) 16 18986427 AL136647 16p13.11-p12.3 Hs.157113 18

iron ion binding

nucleus

mitochondrion

ubiquinone biosynthetic process

oxidoreductase activity

protein metabolic process

Ubiquinone and other terpenoid-quinone biosynthesis

Metabolic pathways

212646_at -0.530 8.576 -2.481 2.527e-02 0.466 -3.452 RFTN1 raftlin, lipid raft linker 1 3 -16332355 D42043 3p25.1-p24.3 Hs.98910 6

plasma membrane

 
242224_at -0.228 3.122 -2.481 2.527e-02 0.466 -3.452 GPATCH2 G patch domain containing 2 1 -215670456 R40111 1q41 Hs.420757 6

nucleic acid binding

intracellular

 
203323_at 0.482 7.788 2.481 2.527e-02 0.466 -3.452 CAV2 caveolin 2 7 115926679 BF197655 7q31.1 Hs.212332 Hs.603096 50

negative regulation of endothelial cell proliferation

protein binding

intracellular

Golgi apparatus

plasma membrane

integral to plasma membrane

caveola

vesicle fusion

mitochondrion organization

endoplasmic reticulum organization

transport vesicle

protein homodimerization activity

vesicle docking

perinuclear region of cytoplasm

skeletal muscle fiber development

protein oligomerization

Focal adhesion

223548_at -0.245 5.383 -2.480 2.528e-02 0.466 -3.452 C1orf26 chromosome 1 open reading frame 26 1 183392814, 183392913 AF288392 1q25 Hs.134183 8    
202844_s_at -0.258 7.653 -2.480 2.529e-02 0.466 -3.453 RALBP1 ralA binding protein 1 18 9465529 AW025261 18p11.3 Hs.528993 Hs.719181 42

GTPase activator activity

protein binding

intracellular

transport

chemotaxis

signal transduction

small GTPase mediated signal transduction

membrane

ATPase activity

Ral GTPase binding

Rac GTPase activator activity

regulation of GTPase activity

positive regulation of Cdc42 GTPase activity

ATPase activity, coupled to movement of substances

Rac GTPase binding

Pathways in cancer

Pancreatic cancer

209905_at 0.360 7.543 2.480 2.531e-02 0.466 -3.453 HOXA9 homeobox A9 7 -27168581 AI246769 7p15-p14 Hs.659350 63

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

transcription activator activity

sequence-specific DNA binding

 
214505_s_at -0.673 12.494 -2.480 2.531e-02 0.466 -3.453 FHL1 four and a half LIM domains 1 X 135056526, 135057224, 135058402, 135079120, 135079731, 135106578, 135106720 AF220153 Xq26 Hs.435369 38

molecular_function

cellular_component

nucleus

cytoplasm

cytosol

multicellular organismal development

muscle organ development

zinc ion binding

organ morphogenesis

cell growth

cell differentiation

metal ion binding

 
1564263_at 0.196 4.838 2.480 2.532e-02 0.466 -3.454 LOC144817 hypothetical protein LOC144817 13   AK056732 13q14.11 Hs.585616 1    
200934_at -0.599 9.031 -2.479 2.534e-02 0.466 -3.454 DEK DEK oncogene 6 -18332380, -18332378 NM_003472 6p22.3 Hs.484813 55

DNA binding

specific RNA polymerase II transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

signal transduction

viral genome replication

histone binding

 
211742_s_at 0.236 4.255 2.479 2.535e-02 0.466 -3.455 EVI2B ecotropic viral integration site 2B 17 -26654913 BC005926 17q11.2 Hs.5509 10

cytoplasm

integral to plasma membrane

membrane

 
209055_s_at -0.449 6.170 -2.479 2.538e-02 0.466 -3.456 CDC5L CDC5 cell division cycle 5-like (S. pombe) 6 44463279 AW268817 6p21 Hs.485471 35

DNA binding

RNA binding

protein binding

nucleus

spliceosomal complex

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

mRNA processing

cell cycle

RNA splicing

nuclear speck

 
234685_x_at 0.253 3.300 2.478 2.542e-02 0.466 -3.457 KRTAP4-9 keratin associated protein 4-9 17 36515166 AJ406941 17q21.2 Hs.307018 Hs.711926 1

keratin filament

 
235577_at 0.518 4.843 2.478 2.542e-02 0.466 -3.457 ZNF652 zinc finger protein 652 17 -44721567, -44721567 AL036451 17q21.32-q21.33 Hs.463375 6

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
223424_s_at -0.271 6.552 -2.477 2.544e-02 0.467 -3.458 ZSCAN21 zinc finger and SCAN domain containing 21 7 99485352 AL136865 7q22.1 Hs.632294 9

transcription factor activity

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

transcription activator activity

metal ion binding

 
223445_at -0.382 6.676 -2.477 2.545e-02 0.467 -3.458 DTNBP1 dystrobrevin binding protein 1 6 -15631784, -15631017 AF061734 6p22.3 Hs.571148 99

nucleus

organelle organization

blood coagulation

visual perception

sarcoplasm

axon

sarcolemma

identical protein binding

response to stimulus

platelet dense granule organization

 
1556325_at -0.461 8.240 -2.477 2.547e-02 0.467 -3.459 FILIP1 filamin A interacting protein 1 6 -76074519 AL832009 6q14.1 Hs.696158 9    
226312_at -0.342 7.938 -2.477 2.548e-02 0.467 -3.459 RICTOR RPTOR independent companion of MTOR, complex 2 5 -38973779 BF940270 5p13.1 Hs.407926 21

guanyl-nucleotide exchange factor activity

protein binding

intracellular

embryonic development

positive regulation of actin filament polymerization

actin cytoskeleton reorganization

TORC2 complex

positive regulation of TOR signaling pathway

regulation of Rac GTPase activity

regulation of actin cytoskeleton organization

positive regulation of peptidyl-tyrosine phosphorylation

regulation of small GTPase mediated signal transduction

regulation of protein kinase B signaling cascade

mTOR signaling pathway

223598_at -0.400 9.548 -2.476 2.548e-02 0.467 -3.459 RAD23B RAD23 homolog B (S. cerevisiae) 9 109085364 AF262027 9q31.2 Hs.521640 54

nucleotide-excision repair, DNA damage removal

damaged DNA binding

single-stranded DNA binding

protein binding

nucleus

nucleoplasm

cytoplasm

cytosol

response to DNA damage stimulus

modification-dependent protein catabolic process

proteasomal ubiquitin-dependent protein catabolic process

protein complex

Nucleotide excision repair

220588_at 0.228 3.931 2.476 2.550e-02 0.467 -3.460 BCAS4 breast carcinoma amplified sequence 4 20 48844873 NM_017843 20q13.13 Hs.708239 6

cytoplasm

 
201828_x_at 0.365 9.276 2.475 2.554e-02 0.467 -3.461 FAM127A family with sequence similarity 127, member A X 133993998 NM_003928 Xq26 Hs.522789 9    
230611_at -0.286 9.547 -2.475 2.558e-02 0.468 -3.462 SYPL2 synaptophysin-like 2 1 109810622 AW271199 1p13.3 Hs.528366 5

transporter activity

transport

synaptic vesicle

membrane

integral to membrane

 
1553284_s_at 0.185 3.227 2.474 2.559e-02 0.468 -3.463 LMLN leishmanolysin-like (metallopeptidase M8 family) 3 199171467 NM_033029 3q29 Hs.518540 2

metalloendopeptidase activity

cytoplasm

proteolysis

cell cycle

mitosis

cell adhesion

peptidase activity

zinc ion binding

membrane

metal ion binding

cell division

 
225157_at -0.409 9.347 -2.474 2.561e-02 0.468 -3.464 MLXIP MLX interacting protein 12 121001142 AW245631 12q24.31 Hs.437153 7

DNA binding

nucleus

cytoplasm

mitochondrion

mitochondrial outer membrane

membrane

transcription regulator activity

regulation of transcription

 
207728_at 0.226 3.829 2.473 2.563e-02 0.468 -3.464 ATF7IP activating transcription factor 7 interacting protein 12 14409877 NM_018005 12p13.1 Hs.714407 17

negative regulation of transcription from RNA polymerase II promoter

transcription corepressor activity

protein binding

nucleus

transcription factor complex

cytoplasm

DNA methylation

ATPase activity

interspecies interaction between organisms

regulation of transcription

positive regulation of transcription, DNA-dependent

regulation of transcriptional preinitiation complex assembly

 
202090_s_at 0.216 11.887 2.473 2.563e-02 0.468 -3.464 UQCR ubiquinol-cytochrome c reductase, 6.4kDa subunit 19 -1548170 NM_006830 19p13.3 Hs.8372 4

mitochondrion

mitochondrial inner membrane

mitochondrial electron transport, ubiquinol to cytochrome c

transport

ubiquinol-cytochrome-c reductase activity

electron carrier activity

membrane

integral to membrane

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Cardiac muscle contraction

Alzheimer's disease

Parkinson's disease

Huntington's disease

1569348_at -0.414 4.238 -2.473 2.564e-02 0.468 -3.465 psiTPTE22 TPTE pseudogene 22 15462800 BC017420 22q11.1 Hs.474116 4    
219789_at -0.574 4.206 -2.472 2.569e-02 0.469 -3.466 NPR3 natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C) 5 32747421 AI628360 5p14-p13 Hs.237028 Hs.619466 27

skeletal system development

receptor activity

membrane fraction

inhibition of adenylate cyclase activity by G-protein signaling

activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger

regulation of blood pressure

peptide receptor activity, G-protein coupled

membrane

integral to membrane

natriuretic peptide receptor activity

peptide hormone binding

chloride ion binding

protein homodimerization activity

 
200738_s_at -0.450 11.446 -2.472 2.570e-02 0.469 -3.467 PGK1 phosphoglycerate kinase 1 X 77246321 NM_000291 Xq13 Hs.78771 52

nucleotide binding

phosphoglycerate kinase activity

ATP binding

cytoplasm

glycolysis

phosphorylation

transferase activity

Glycolysis / Gluconeogenesis

Carbon fixation in photosynthetic organisms

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

1552978_a_at -0.580 5.549 -2.472 2.571e-02 0.469 -3.467 SCAMP1 secretory carrier membrane protein 1 5 77692094 NM_052822 5q13.3-q14.1 Hs.482587 22

protein binding

endosome

Golgi apparatus

trans-Golgi network

post-Golgi vesicle-mediated transport

protein transport

membrane

integral to membrane

recycling endosome membrane

 
220259_at 0.208 3.264 2.471 2.574e-02 0.469 -3.468 PLEKHH3 pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 17 -38073458 NM_024927 17q21.2 Hs.632251 2

cytoskeleton

 
232489_at 0.385 5.732 2.471 2.575e-02 0.469 -3.468 CCDC76 coiled-coil domain containing 76 1 100371293 AK001149 1pter-q31.3 Hs.440371 5

tRNA processing

methyltransferase activity

zinc ion binding

transferase activity

metal ion binding

 
225210_s_at -0.332 8.367 -2.470 2.579e-02 0.469 -3.470 FAM103A1 family with sequence similarity 103, member A1 15 81445998 AW025216 15q25.2 Hs.80624 3    
214927_at 0.395 5.737 2.470 2.581e-02 0.470 -3.470 ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) 13 100902966 AL359052 13q33 Hs.696554 5

receptor activity

binding

extracellular region

cell adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

integrin complex

 
1561281_a_at 0.222 3.189 2.469 2.584e-02 0.470 -3.471 LOC284576 hypothetical protein LOC284576 1   AK090497 1q32.1 Hs.585440 1    
201075_s_at -0.314 5.226 -2.469 2.586e-02 0.470 -3.472 SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 3 -47602381 NM_003074 3p23-p21 Hs.476179 39

chromatin

DNA binding

chromatin binding

transcription coactivator activity

intracellular

nucleus

nucleoplasm

chromatin assembly or disassembly

chromatin remodeling

regulation of transcription from RNA polymerase II promoter

protein C-terminus binding

organ morphogenesis

SWI/SNF complex

regulation of transcription

positive regulation of transcription, DNA-dependent

protein N-terminus binding

 
225154_at -0.204 8.403 -2.469 2.586e-02 0.470 -3.472 SYAP1 synapse associated protein 1, SAP47 homolog (Drosophila) X 16647675 BG029566 Xp22.2 Hs.605178 11

nucleus

 
223611_s_at 0.513 5.929 2.468 2.589e-02 0.470 -3.473 LNX1 ligand of numb-protein X 1 4 -54021193, -54021193 AI738919 4q12 Hs.518760 Hs.624833 22

ubiquitin-protein ligase activity

protein binding

cytoplasm

zinc ion binding

ligase activity

PDZ domain binding

protein ubiquitination during ubiquitin-dependent protein catabolic process

metal ion binding

protein homooligomerization

 
222847_s_at -0.302 5.277 -2.468 2.590e-02 0.470 -3.473 EGLN3 egl nine homolog 3 (C. elegans) 14 -33463171 AI378406 14q13.1 Hs.135507 26

iron ion binding

protein binding

nucleus

cytoplasm

apoptosis

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

L-ascorbic acid binding

metal ion binding

oxidation reduction

Pathways in cancer

Renal cell carcinoma

226612_at -0.552 8.605 -2.468 2.590e-02 0.470 -3.473 FLJ25076 probable ubiquitin-conjugating enzyme E2 FLJ25076 5 6501735 H17038 5p15.31 Hs.126856 3

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

 
224355_s_at 0.367 5.409 2.468 2.592e-02 0.470 -3.474 MS4A8B membrane-spanning 4-domains, subfamily A, member 8B 11 60223622 AF237905 11q12.2 Hs.150878 5

receptor activity

signal transduction

membrane

integral to membrane

 
222589_at -0.308 6.459 -2.468 2.593e-02 0.470 -3.474 NLK nemo-like kinase 17 23393814 AI967933 17q11.2 Hs.208759 24

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

MAP kinase activity

ATP binding

nucleus

nucleolus

cytoplasm

transforming growth factor beta receptor signaling pathway

protein kinase cascade

transcription factor binding

transferase activity

peptidyl-threonine phosphorylation

negative regulation of Wnt receptor signaling pathway

ubiquitin protein ligase binding

serine phosphorylation of STAT3 protein

SH2 domain binding

regulation of transcription

protein amino acid autophosphorylation

MAPK signaling pathway

Wnt signaling pathway

Adherens junction

205032_at -0.182 4.910 -2.467 2.595e-02 0.470 -3.475 ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 5 52320912 NM_002203 5q23-q31 Hs.482077 235

magnesium ion binding

receptor activity

calcium ion binding

collagen binding

plasma membrane

plasma membrane

cell adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

blood coagulation

integrin complex

organ morphogenesis

external side of plasma membrane

integral to membrane

identical protein binding

interspecies interaction between organisms

Focal adhesion

ECM-receptor interaction

Hematopoietic cell lineage

Regulation of actin cytoskeleton

Pathways in cancer

Small cell lung cancer

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

1554514_at -0.259 3.375 -2.467 2.595e-02 0.470 -3.475 ACSM5 acyl-CoA synthetase medium-chain family member 5 16 20328356 BC013753 16p12.3 Hs.659606 3

nucleotide binding

magnesium ion binding

ATP binding

GTP binding

mitochondrion

mitochondrial matrix

lipid metabolic process

fatty acid metabolic process

metabolic process

ligase activity

butyrate-CoA ligase activity

Butanoate metabolism

Metabolic pathways

226804_at 0.285 4.386 2.467 2.597e-02 0.470 -3.476 FAM20A family with sequence similarity 20, member A 17 -64042852, -64042852 AI632223 17q24.2 Hs.268874 5

extracellular region

 
215464_s_at 0.330 6.211 2.467 2.597e-02 0.470 -3.476 TAX1BP3 Tax1 (human T-cell leukemia virus type I) binding protein 3 17 -3512937 AK001327 17p13 Hs.12956 14

nucleus

cytoplasm

Rho protein signal transduction

beta-catenin binding

negative regulation of cell proliferation

negative regulation of Wnt receptor signaling pathway

transcription regulator activity

 
212728_at 0.253 4.844 2.466 2.599e-02 0.470 -3.476 DLG3 discs, large homolog 3 (Drosophila) X 69581448, 69588885 T62872 Xq13.1 Hs.716481 39

guanylate kinase activity

protein binding

cellular_component

negative regulation of cell proliferation

 
228471_at 0.386 4.707 2.466 2.604e-02 0.470 -3.478 ANKRD44 ankyrin repeat domain 44 2 -197567494 AA744636 2q33.1 Hs.654819 6

protein binding

 
201288_at 0.393 7.825 2.465 2.606e-02 0.470 -3.479 ARHGDIB Rho GDP dissociation inhibitor (GDI) beta 12 -14986216 NM_001175 12p12.3 Hs.504877 34

Rho GDP-dissociation inhibitor activity

GTPase activator activity

protein binding

cytoplasm

cytoskeleton

cell motion

immune response

negative regulation of cell adhesion

Rho protein signal transduction

multicellular organismal development

cytoplasmic membrane-bounded vesicle

actin cytoskeleton organization

Neurotrophin signaling pathway

207284_s_at -0.393 6.962 -2.465 2.607e-02 0.470 -3.479 ASPH aspartate beta-hydroxylase 8 -62739837, -62699648, -62699648, -62575669 NM_020164 8q12.1 Hs.591874 24

peptide-aspartate beta-dioxygenase activity

binding

iron ion binding

calcium ion binding

endoplasmic reticulum

endoplasmic reticulum membrane

muscle contraction

pattern specification process

negative regulation of cell proliferation

structural constituent of muscle

electron carrier activity

membrane

integral to membrane

oxidoreductase activity

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

peptidyl-amino acid modification

integral to endoplasmic reticulum membrane

limb morphogenesis

peptidyl-aspartic acid hydroxylation

oxidation reduction

palate development

face morphogenesis

 
1555420_a_at -0.316 4.324 -2.465 2.608e-02 0.470 -3.480 KLF7 Kruppel-like factor 7 (ubiquitous) 2 -207653773 BC012919 2q32 Hs.471221 9

transcription factor activity

transcription coactivator activity

intracellular

nucleus

regulation of transcription from RNA polymerase II promoter

axon guidance

zinc ion binding

regulation of transcription

positive regulation of transcription, DNA-dependent

metal ion binding

dendrite morphogenesis

 
202166_s_at -0.518 9.095 -2.464 2.610e-02 0.470 -3.480 PPP1R2 protein phosphatase 1, regulatory (inhibitor) subunit 2 3 -196722511 NM_006241 3q29 Hs.535731 Hs.706920 22

protein serine/threonine phosphatase inhibitor activity

protein binding

carbohydrate metabolic process

glycogen metabolic process

generation of precursor metabolites and energy

regulation of signal transduction

regulation of phosphoprotein phosphatase activity

 
202071_at -0.851 7.771 -2.464 2.612e-02 0.471 -3.481 SDC4 syndecan 4 20 -43387342 NM_002999 20q12 Hs.632267 60

molecular_function

Golgi apparatus

plasma membrane

integral to plasma membrane

cytoskeletal protein binding

biological_process

cell surface

thrombospondin receptor activity

ECM-receptor interaction

Cell adhesion molecules (CAMs)

1554670_at 0.324 4.048 2.463 2.615e-02 0.471 -3.482 GGA1 golgi associated, gamma adaptin ear containing, ARF binding protein 1 22 36334448, 36334448 BC029388 22q13.31 Hs.499158 50

molecular_function

protein binding

intracellular

endosome

intracellular protein transport

membrane

vesicle-mediated transport

membrane coat

clathrin adaptor complex

Golgi apparatus part

Lysosome

222421_at -0.305 8.212 -2.463 2.618e-02 0.471 -3.483 UBE2H ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) 7 -129260230 BF435617 7q32 Hs.643548 16

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ubiquitin-dependent protein catabolic process

protein ubiquitination

ligase activity

regulation of protein metabolic process

Ubiquitin mediated proteolysis

223353_at -0.238 7.134 -2.462 2.621e-02 0.471 -3.484 HCCA2 HCCA2 protein 11 -1447268 AB028173 11p15.5 Hs.370360 6

protein binding

nucleus

cytoplasm

zinc ion binding

metal ion binding

perinuclear region of cytoplasm

 
1552670_a_at -0.914 6.455 -2.462 2.621e-02 0.471 -3.484 PPP1R3B protein phosphatase 1, regulatory (inhibitor) subunit 3B 8 -9031176 NM_024607 8p23.1 Hs.458513 7

carbohydrate metabolic process

glycogen metabolic process

Insulin signaling pathway

220129_at 0.712 4.303 2.462 2.622e-02 0.471 -3.484 SOHLH2 spermatogenesis and oogenesis specific basic helix-loop-helix 2 13 -35640346 NM_017826 13q13.3 Hs.124519 4

DNA binding

nucleus

multicellular organismal development

spermatogenesis

cell differentiation

transcription regulator activity

regulation of transcription

oogenesis

 
209192_x_at -0.246 6.558 -2.461 2.626e-02 0.472 -3.485 KAT5 K(lysine) acetyltransferase 5 11 65236064 BC000166 11q13 Hs.397010 88

chromatin

chromatin binding

transcription coactivator activity

histone acetyltransferase activity

protein binding

nucleus

nucleolus

cytoplasm

double-strand break repair

chromatin assembly or disassembly

DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator

zinc ion binding

acyltransferase activity

chromatin modification

histone acetylation

transferase activity

androgen receptor signaling pathway

Piccolo NuA4 histone acetyltransferase complex

NuA4 histone acetyltransferase complex

regulation of growth

interspecies interaction between organisms

regulation of transcription

positive regulation of transcription, DNA-dependent

positive regulation of transcription, DNA-dependent

metal ion binding

perinuclear region of cytoplasm

androgen receptor binding

 
1563632_at -0.250 5.280 -2.461 2.626e-02 0.472 -3.485 LOC220980 hypothetical protein LOC220980 10   AK056518 10q11.21 Hs.645270 1    
227612_at 0.210 3.583 2.460 2.630e-02 0.472 -3.487 ELAVL3 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C) 19 -11423142 R20763 19p13.2 Hs.1701 8

nucleotide binding

RNA binding

multicellular organismal development

nervous system development

cell differentiation

 
213019_at -0.283 7.854 -2.460 2.630e-02 0.472 -3.487 RANBP6 RAN binding protein 6 9 -6001019, -6001018 AI123233 9p24.1 Hs.167496 Hs.675725 5

binding

nucleus

cytoplasm

protein transport

 
1554728_at 0.188 3.408 2.460 2.630e-02 0.472 -3.487 SLC9A1 solute carrier family 9 (sodium/hydrogen exchanger), member 1 1 -27297887 BC012121 1p36.1-p35 Hs.469116 86

response to acid

membrane fraction

cation transport

sodium ion transport

regulation of pH

protein kinase cascade

transcription factor binding

response to acidity

response to organic cyclic substance

antiporter activity

solute:hydrogen antiporter activity

sodium:hydrogen antiporter activity

membrane

integral to membrane

cell growth

basolateral plasma membrane

cell differentiation

sodium ion binding

response to drug

membrane raft

positive regulation of anti-apoptosis

Cardiac muscle contraction

Regulation of actin cytoskeleton

201364_s_at -0.274 9.042 -2.460 2.635e-02 0.472 -3.488 OAZ2 ornithine decarboxylase antizyme 2 15 -62766825 AF242521 15q22.31 Hs.713816 Hs.74563 9

protein binding

polyamine metabolic process

ornithine decarboxylase inhibitor activity

 
202254_at 0.508 4.103 2.459 2.639e-02 0.472 -3.490 SIPA1L1 signal-induced proliferation-associated 1 like 1 14 71065794 AB007900 14q24.2 Hs.654657 14

molecular_function

GTPase activator activity

protein binding

cellular_component

intracellular

biological_process

regulation of small GTPase mediated signal transduction

 
235770_at -0.543 3.252 -2.459 2.640e-02 0.472 -3.490 MASP1 mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) 3 -188447299, -188434565, -188418631 AI023911 3q27-q28 Hs.89983 30

complement activation, lectin pathway

complement activation, lectin pathway

serine-type endopeptidase activity

calcium ion binding

extracellular region

extracellular region

extracellular space

proteolysis

peptidase activity

protein homodimerization activity

calcium-dependent protein binding

Complement and coagulation cascades

225852_at 0.246 7.584 2.458 2.640e-02 0.472 -3.490 ANKRD17 ankyrin repeat domain 17 4 -74159365 BE463523 4q13.3 Hs.644997 Hs.719092 10

RNA binding

ATP binding

nucleus

cytoplasm

mismatch repair

mismatched DNA binding

interspecies interaction between organisms

 
211581_x_at 0.320 5.299 2.458 2.641e-02 0.472 -3.491 LST1 leukocyte specific transcript 1 6 31661949, 31662603, 3000093, 3000747, 2801557, 2802211 AF000426 6p21.3 Hs.436066 20

cell morphogenesis

molecular_function

protein binding

cytoplasm

Golgi apparatus

immune response

regulation of cell shape

anatomical structure morphogenesis

membrane

integral to membrane

dendrite development

negative regulation of lymphocyte proliferation

 
222130_s_at -0.306 6.905 -2.458 2.644e-02 0.472 -3.491 FTSJ2 FtsJ homolog 2 (E. coli) 7 -2240451 AK024635 7p22 Hs.279877 4

nucleic acid binding

nucleus

nucleolus

rRNA processing

RNA methyltransferase activity

transferase activity

rRNA methylation

methylation

 
223175_s_at -0.438 10.444 -2.458 2.645e-02 0.472 -3.492 FEM1A fem-1 homolog a (C. elegans) 19 4742727 BC004988 19p13.3 Hs.515082 9

ubiquitin-protein ligase activity

cytoplasm

modification-dependent protein catabolic process

regulation of ubiquitin-protein ligase activity

 
229105_at -0.224 3.149 -2.457 2.645e-02 0.472 -3.492 GPR39 G protein-coupled receptor 39 2 132890616 AV717094 2q21-q22 Hs.432395 Hs.719231 14

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

zinc ion binding

metal ion binding

 
226591_at 0.686 6.832 2.457 2.647e-02 0.472 -3.492 SNRPN small nuclear ribonucleoprotein polypeptide N 15 22619886, 22652790, 22751227 BG413612 15q11.2 Hs.555970 Hs.564847 Hs.578619 Hs.585703 Hs.592473 Hs.621316 Hs.632166 47

RNA binding

nucleus

spliceosomal complex

RNA splicing

small nuclear ribonucleoprotein complex

identical protein binding

 
225999_at -0.381 5.149 -2.457 2.647e-02 0.472 -3.492 RIMKLB ribosomal modification protein rimK-like family member B 12 8741784 AI743612 12p13.31 Hs.504670 4

nucleotide binding

catalytic activity

ATP binding

protein modification process

manganese ion binding

metal ion binding

 
227582_at 0.326 6.611 2.457 2.649e-02 0.472 -3.493 KLHDC9 kelch domain containing 9 1 159334777 AW079843 1q23.3 Hs.507290 3    
214751_at 0.489 4.058 2.457 2.650e-02 0.472 -3.493 ZNF468 zinc finger protein 468 19 -58033596 BE541042 19q13.41 Hs.467223 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
222394_at -0.325 7.107 -2.457 2.650e-02 0.472 -3.493 PDCD6IP programmed cell death 6 interacting protein 3 33815069, 33815069, 33845133 BG484789 3p22.3 Hs.475896 65

protein binding

cytoplasm

centrosome

cytosol

apoptosis

cell cycle

protein transport

melanosome

interspecies interaction between organisms

cell division

Endocytosis

225484_at 0.262 4.076 2.457 2.650e-02 0.472 -3.493 TSGA14 testis specific, 14 7 -129823610 AW157525 7q32 Hs.368315 6

centrosome

 
209141_at -0.553 9.966 -2.456 2.652e-02 0.472 -3.494 UBE2G1 ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast) 17 -4119260 AW299555 17p13.2 1q42 Hs.714345 12

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ubiquitin-dependent protein catabolic process

ligase activity

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

Parkinson's disease

221449_s_at -0.572 8.152 -2.456 2.653e-02 0.472 -3.494 ITFG1 integrin alpha FG-GAP repeat containing 1 16 -45746798 NM_030790 16q12.1 Hs.42217 5

protein binding

extracellular region

membrane

integral to membrane

 
209677_at -0.407 3.387 -2.456 2.653e-02 0.472 -3.494 PRKCI protein kinase C, iota 3 171422913 L18964 3q26.3 Hs.478199 91

polarisome

nucleotide binding

protein kinase C activity

protein binding

ATP binding

phospholipid binding

nucleus

cytoplasm

endosome

cytosol

protein amino acid phosphorylation

protein targeting to membrane

cytoskeleton organization

actin filament organization

intracellular signaling cascade

zinc ion binding

membrane

membrane organization

vesicle-mediated transport

apical plasma membrane

transferase activity

diacylglycerol binding

cellular response to insulin stimulus

establishment of apical/basal cell polarity

eye photoreceptor cell development

establishment or maintenance of epithelial cell apical/basal polarity

cell-cell junction organization

positive regulation of glucose import

metal ion binding

secretion

Golgi vesicle budding

regulation of establishment of protein localization

Endocytosis

Tight junction

Insulin signaling pathway

204821_at 0.349 4.520 2.456 2.653e-02 0.472 -3.495 BTN3A3 butyrophilin, subfamily 3, member A3 6 26548741 NM_006994 6p21.3 Hs.167741 9

membrane

integral to membrane

 
205428_s_at 0.206 4.777 2.456 2.655e-02 0.472 -3.495 CALB2 calbindin 2 16 69950126, 69950126 NM_001740 16q22.2 Hs.106857 33

calcium ion binding

gap junction

 
214473_x_at 0.267 6.323 2.455 2.657e-02 0.472 -3.496 PMS2L3 postmeiotic segregation increased 2-like 3 7 -74975005, -74975004 NM_005395 7q11.23 Hs.406395 Hs.659871 Hs.661055 4

molecular_function

nucleic acid binding

ATP binding

cellular_component

intracellular

regulation of transcription, DNA-dependent

biological_process

 
207436_x_at -0.267 7.983 -2.455 2.657e-02 0.472 -3.496 KIAA0894 KIAA0894 protein 10   NM_014896 10q23.33   1    
228525_at -0.246 6.224 -2.455 2.658e-02 0.472 -3.496 LRP3 low density lipoprotein receptor-related protein 3 19 38377438 AL583533 19q13.11 Hs.515340 Hs.715569 9

receptor activity

coated pit

receptor-mediated endocytosis

membrane

integral to membrane

 
223441_at 0.375 6.537 2.455 2.659e-02 0.472 -3.496 SLC17A5 solute carrier family 17 (anion/sugar transporter), member 5 6 -74359822 AK026921 6q14-q15 Hs.597422 28

sugar:hydrogen symporter activity

membrane fraction

lysosomal membrane

integral to plasma membrane

transport

anion transport

symporter activity

membrane

Lysosome

218484_at 0.324 6.248 2.455 2.660e-02 0.472 -3.497 NDUFA4L2 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2 12 -55914952 NM_020142 12q13.3 Hs.75069 5  

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

206668_s_at -0.480 5.281 -2.454 2.663e-02 0.472 -3.498 SCAMP1 secretory carrier membrane protein 1 5 77692094 NM_004866 5q13.3-q14.1 Hs.482587 22

protein binding

endosome

Golgi apparatus

trans-Golgi network

post-Golgi vesicle-mediated transport

protein transport

membrane

integral to membrane

recycling endosome membrane

 
212119_at -0.236 10.984 -2.454 2.664e-02 0.472 -3.498 RHOQ ras homolog gene family, member Q 2 46623370 BF670447 2p21 Hs.709193 27

nucleotide binding

GTPase activity

profilin binding

GTP binding

intracellular

cytoplasm

actin filament

plasma membrane

GTP catabolic process

small GTPase mediated signal transduction

insulin receptor signaling pathway

regulation of cell shape

positive regulation of specific transcription from RNA polymerase II promoter

cortical actin cytoskeleton organization

GBD domain binding

regulation of actin cytoskeleton organization

membrane raft

positive regulation of glucose import

positive regulation of filopodium assembly

regulation of establishment of protein localization

Insulin signaling pathway

1556736_at 0.199 4.380 2.454 2.664e-02 0.472 -3.498 LOC100129858 hypothetical protein LOC100129858 4   AK095554 4q31.1 Hs.660477 1    
214278_s_at -0.246 6.162 -2.454 2.665e-02 0.472 -3.498 NDRG2 NDRG family member 2 14 -20554761, -20554761 AI358939 14q11.2 Hs.525205 42

molecular_function

nucleus

cytoplasm

Golgi apparatus

centrosome

cytosol

multicellular organismal development

nervous system development

cell differentiation

perinuclear region of cytoplasm

 
209771_x_at 0.509 4.450 2.453 2.667e-02 0.472 -3.499 CD24 CD24 molecule 6 -19611913 AA761181 6q21 Hs.644105 Hs.694721 65

response to hypoxia

cell activation

regulation of cytokine-mediated signaling pathway

response to molecule of bacterial origin

pre-B cell differentiation

leukocyte migration during inflammatory response

immune response-regulating cell surface receptor signaling pathway

positive regulation of T cell mediated immune response to tumor cell

positive regulation of inflammatory response to antigenic stimulus

positive regulation of B cell apoptosis

signal transducer activity

protein binding

membrane fraction

plasma membrane

oxygen and reactive oxygen species metabolic process

heterophilic cell adhesion

leukocyte adhesion

elevation of cytosolic calcium ion concentration

neuromuscular synaptic transmission

negative regulation of neuroblast proliferation

induction of apoptosis by extracellular signals

induction of apoptosis by intracellular signals

apoptotic mitochondrial changes

external side of plasma membrane

Wnt receptor signaling pathway

cell migration

protein kinase binding

carbohydrate binding

apoptotic nuclear changes

protein tyrosine kinase activator activity

regulation of epithelial cell differentiation

negative regulation of B cell proliferation

neuron projection development

anchored to membrane

T cell costimulation

anchored to external side of plasma membrane

microvillus membrane

B cell receptor transport into membrane raft

chemokine receptor transport out of membrane raft

negative regulation of transforming growth factor-beta3 production

positive regulation of integrin activation

positive regulation of cell-cell adhesion mediated by integrin

negative regulation of erythrocyte clearance

homotypic cell-cell adhesion

negative regulation of erythrocyte aggregation

positive regulation of T cell homeostatic proliferation

positive regulation of activated T cell proliferation

regulation of phosphorylation

cholesterol homeostasis

positive regulation of MAP kinase activity

regulation of MAPKKK cascade

eukaryotic cell surface binding

response to estrogen stimulus

membrane raft

regulation of B cell differentiation

negative regulation of neuron differentiation

respiratory burst

negative regulation of T cell homeostatic proliferation

positive regulation of alpha-beta T cell proliferation

synaptic vesicle endocytosis

positive regulation of peptidyl-tyrosine phosphorylation

positive regulation of calcium-mediated signaling

cilium membrane

 
235645_at -0.327 3.389 -2.453 2.668e-02 0.472 -3.499 ESCO1 establishment of cohesion 1 homolog 1 (S. cerevisiae) 18 -17363259 AW501507 18q11.2 Hs.464733 8

damaged DNA binding

DNA-directed DNA polymerase activity

nucleus

DNA repair

cell cycle

zinc ion binding

acyltransferase activity

transferase activity

metal ion binding

 
206028_s_at 0.225 3.393 2.453 2.669e-02 0.472 -3.500 MERTK c-mer proto-oncogene tyrosine kinase 2 112372661 NM_006343 2q14.1 Hs.306178 32

nucleotide binding

photoreceptor outer segment

transmembrane receptor protein tyrosine kinase activity

receptor activity

ATP binding

soluble fraction

integral to plasma membrane

protein amino acid phosphorylation

phagocytosis

cell surface receptor linked signal transduction

cell-cell signaling

visual perception

membrane

transferase activity

response to stimulus

 
1552887_at -0.237 4.439 -2.453 2.669e-02 0.472 -3.500 C10orf27 chromosome 10 open reading frame 27 10 -72201000 NM_152710 10q22.1 Hs.386698 5

protein binding

cytoplasm

cytosol

multicellular organismal development

spermatogenesis

cell differentiation

 
1560665_at 0.204 4.500 2.453 2.670e-02 0.472 -3.500 SCPEP1 serine carboxypeptidase 1 17 52410466 AK092928 17q22 Hs.514950 8

serine-type carboxypeptidase activity

extracellular region

proteolysis

peptidase activity

 
1562799_at 0.224 5.444 2.453 2.670e-02 0.472 -3.500 LOC100130285 hypothetical LOC100130285 16   AK097604 16p13.3 Hs.683811 1    
218499_at 0.264 2.665 2.453 2.670e-02 0.472 -3.500 RP6-213H19.1 serine/threonine protein kinase MST4 X 130984925, 130985316 NM_016542 Xq26.2 Hs.444247 16

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

ATP binding

cytoplasm

Golgi apparatus

protein amino acid phosphorylation

transferase activity

identical protein binding

regulation of apoptosis

 
236824_at -0.192 2.615 -2.453 2.670e-02 0.472 -3.500 TMEM132B transmembrane protein 132B 12 124377114 AI435595 12q24.31-q24.32 Hs.524838 4

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
213126_at -0.327 4.648 -2.453 2.671e-02 0.472 -3.500 MED8 mediator complex subunit 8 1 -43622983, -43622174 BG230758 1p34.2 Hs.301756 12

nucleus

regulation of transcription from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

modification-dependent protein catabolic process

regulation of transcription

 
223404_s_at -0.356 7.473 -2.452 2.675e-02 0.472 -3.502 C1orf25 chromosome 1 open reading frame 25 1 -183353840 AW512122 1q25.2 Hs.107149 6

RNA binding

tRNA (guanine-N2-)-methyltransferase activity

intracellular

behavior

tRNA processing

zinc ion binding

metal ion binding

 
200818_at 0.217 12.156 2.452 2.675e-02 0.472 -3.502 ATP5O ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit 21 -34197626 NM_001697 21q22.1-q22.2 21q22.11 Hs.409140 12

transporter activity

mitochondrion

mitochondrial proton-transporting ATP synthase complex

mitochondrial proton-transporting ATP synthase complex

plasma membrane

ATP catabolic process

ion transport

drug binding

proton transport

ATPase activity

mitochondrial ATP synthesis coupled proton transport

proton-transporting ATP synthase complex, catalytic core F(1)

hydrogen ion transporting ATP synthase activity, rotational mechanism

proton-transporting ATPase activity, rotational mechanism

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

212309_at -0.367 8.706 -2.452 2.676e-02 0.472 -3.502 CLASP2 cytoplasmic linker associated protein 2 3 -33512741 AV725315 3p22.3 Hs.108614 17

condensed chromosome kinetochore

protein binding

cytoplasm

Golgi apparatus

centrosome

spindle

kinetochore microtubule

cytoskeleton

cytoplasmic microtubule

cell cortex

negative regulation of microtubule depolymerization

cell cycle

mitosis

establishment or maintenance of cell polarity

galactoside 2-alpha-L-fucosyltransferase activity

regulation of microtubule polymerization or depolymerization

microtubule plus-end binding

cell division

 
206935_at 0.788 2.567 2.452 2.677e-02 0.472 -3.502 PCDH8 protocadherin 8 13 -52316109 NM_002590 13q14.3-q21.1 Hs.19492 13

calcium ion binding

protein binding

plasma membrane

integral to plasma membrane

cell adhesion

homophilic cell adhesion

cell-cell signaling

 
203179_at 0.266 7.076 2.451 2.681e-02 0.473 -3.504 GALT galactose-1-phosphate uridylyltransferase 9 34636634 NM_000155 9p13 Hs.522090 72

iron ion binding

cytosol

carbohydrate metabolic process

galactose metabolic process

UDP-glucose:hexose-1-phosphate uridylyltransferase activity

UDP-glucose:hexose-1-phosphate uridylyltransferase activity

zinc ion binding

transferase activity

nucleotidyltransferase activity

metal ion binding

Galactose metabolism

Amino sugar and nucleotide sugar metabolism

Metabolic pathways

212166_at -0.196 7.750 -2.451 2.682e-02 0.473 -3.504 XPO7 exportin 7 8 21833125, 21879694 H38643 8p21 Hs.172685 9

protein import into nucleus, docking

nuclear export signal receptor activity

nucleus

nuclear pore

cytoplasm

protein export from nucleus

protein transporter activity

mRNA transport

intracellular protein transmembrane transport

 
216178_x_at -0.593 7.325 -2.450 2.683e-02 0.473 -3.504 ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 10 -33236244, -33229251, -33229251, -33229251 AA215854 10p11.2 Hs.643813 512

G1/S transition of mitotic cell cycle

in utero embryonic development

cell fate specification

receptor activity

integrin binding

focal adhesion

cellular defense response

cell adhesion

homophilic cell adhesion

leukocyte adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

positive regulation of cell proliferation

integrin complex

germ cell migration

cell surface

integral to membrane

synaptosome

B cell differentiation

neuromuscular junction

ruffle membrane

cell-cell adhesion mediated by integrin

sarcolemma

melanosome

identical protein binding

interspecies interaction between organisms

sarcomere organization

negative regulation of cell differentiation

protein heterodimerization activity

regulation of cell cycle

cardiac muscle cell differentiation

Axon guidance

Focal adhesion

ECM-receptor interaction

Cell adhesion molecules (CAMs)

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Pathogenic Escherichia coli infection - EHEC

Pathways in cancer

Small cell lung cancer

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

221876_at -0.170 6.368 -2.450 2.684e-02 0.473 -3.504 ZNF783 zinc finger family member 783 7 148590194 AU151157 7q36.1 Hs.490512 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

 
213880_at -1.994 6.564 -2.450 2.685e-02 0.473 -3.505 LGR5 leucine-rich repeat-containing G protein-coupled receptor 5 12 70120079 AL524520 12q22-q23 Hs.658889 16

receptor activity

protein binding

plasma membrane

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

protein-hormone receptor activity

 
227498_at -0.736 7.987 -2.450 2.685e-02 0.473 -3.505 SOX6 SRY (sex determining region Y)-box 6 11 -15944571, -15944571, -15944571 AI480314 11p15.3 Hs.368226 24

transcription factor activity

nucleus

chromatin organization

regulation of transcription, DNA-dependent

multicellular organismal development

muscle organ development

 
204631_at -0.655 13.478 -2.450 2.687e-02 0.473 -3.506 MYH2 myosin, heavy chain 2, skeletal muscle, adult 17 -10365189, -10365189 NM_017534 17p13.1 Hs.699445 22

microfilament motor activity

nucleotide binding

actin binding

calmodulin binding

ATP binding

nucleolus

cytoplasm

striated muscle thick filament

focal adhesion

striated muscle contraction

structural constituent of muscle

myosin complex

muscle filament sliding

Tight junction

242201_at 0.467 5.241 2.449 2.692e-02 0.474 -3.507 PMS2L5 postmeiotic segregation increased 2-like 5 7 73944829, 73944829 AI418253 7q11-q22 Hs.292996 Hs.647025 4

ATP binding

mismatch repair

mismatched DNA binding

 
224692_at -0.495 6.812 -2.448 2.693e-02 0.474 -3.508 PPP1R15B protein phosphatase 1, regulatory (inhibitor) subunit 15B 1 -202639114 BF796046 1q32.1 Hs.304376 6

protein phosphatase type 1 complex

protein serine/threonine phosphatase activity

regulation of translation

response to oxidative stress

ER overload response

response to hydrogen peroxide

 
231816_s_at 0.237 4.612 2.448 2.695e-02 0.474 -3.508 UBE2Q1 ubiquitin-conjugating enzyme E2Q family member 1 1 -152787674 AI986085 1q21.3 Hs.607928 7

nucleotide binding

ubiquitin-protein ligase activity

protein binding

ATP binding

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

228785_at -0.314 7.557 -2.448 2.696e-02 0.474 -3.508 ZNF281 zinc finger protein 281 1 -198642042 AA121673 1q32.1 Hs.59757 5

negative regulation of transcription from RNA polymerase II promoter

DNA binding

specific RNA polymerase II transcription factor activity

intracellular

nucleus

DNA-directed RNA polymerase II, core complex

zinc ion binding

regulation of transcription

metal ion binding

 
209498_at 0.252 5.401 2.447 2.700e-02 0.474 -3.510 CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 19 -47703297 X16354 19q13.2 Hs.512682 97

angiogenesis

molecular_function

extracellular region

membrane fraction

plasma membrane

plasma membrane

integral to plasma membrane

homophilic cell adhesion

integrin-mediated signaling pathway

cell migration

 
1564544_x_at -0.257 5.028 -2.447 2.701e-02 0.474 -3.510 LOC644450 hypothetical protein LOC644450 1   BC014871 1q12 Hs.652926 1    
223805_at -0.382 8.468 -2.447 2.703e-02 0.474 -3.511 OSBPL6 oxysterol binding protein-like 6 2 178767619, 178893216 AF323728 2q31-q32.1 Hs.318775 7

lipid transport

steroid metabolic process

 
205551_at 0.397 5.273 2.446 2.704e-02 0.474 -3.511 SV2B synaptic vesicle glycoprotein 2B 15 89570106 NM_014848 15q26.1 Hs.21754 12

acrosomal vesicle

transporter activity

protein binding

neurotransmitter transport

synaptic vesicle

membrane

integral to membrane

cell junction

cytoplasmic vesicle

synapse

regulation of protein metabolic process

ECM-receptor interaction

218191_s_at -0.423 8.686 -2.446 2.705e-02 0.474 -3.512 LMBRD1 LMBR1 domain containing 1 6 -70442469 NM_018368 6q13 Hs.271643 9

lysosome

transport

membrane

integral to membrane

cobalamin binding

interspecies interaction between organisms

cobalt ion binding

 
232940_s_at 0.255 5.802 2.446 2.705e-02 0.474 -3.512 MLL3 myeloid/lymphoid or mixed-lineage leukemia 3 7 -151462942 AK025911 7q36.1 Hs.647120 21

DNA binding

protein binding

nucleus

regulation of transcription, DNA-dependent

intracellular signaling cascade

methyltransferase activity

zinc ion binding

chromatin modification

transferase activity

histone-lysine N-methyltransferase activity

metal ion binding

 
239265_at 0.446 4.832 2.446 2.706e-02 0.474 -3.512 TMEM20 transmembrane protein 20 10 95643719 R56424 10q23.33 Hs.632085 4

membrane

integral to membrane

 
240114_s_at 0.244 5.303 2.445 2.710e-02 0.475 -3.513 TMEM174 transmembrane protein 174 5 72504778 AI927971 5q13.2 Hs.508588 3

membrane

integral to membrane

 
235388_at -0.645 4.400 -2.445 2.710e-02 0.475 -3.513 CHD9 chromodomain helicase DNA binding protein 9 16 51646445 BG538482 16q12.2 Hs.59159 Hs.622347 10

nucleotide binding

chromatin

DNA binding

chromatin binding

helicase activity

protein binding

ATP binding

nucleus

cytoplasm

chromatin assembly or disassembly

chromatin modification

hydrolase activity

regulation of transcription

 
216054_x_at 0.207 6.600 2.445 2.712e-02 0.475 -3.514 MYL4 myosin, light chain 4, alkali; atrial, embryonic 17 42641426, 42641712 X58851 17q21-qter Hs.463300 21

regulation of the force of heart contraction

motor activity

actin monomer binding

calcium ion binding

muscle myosin complex

muscle organ development

structural constituent of muscle

myosin complex

A band

myosin II heavy chain binding

positive regulation of ATPase activity

actin filament binding

cardiac muscle contraction

Cardiac muscle contraction

227539_at -0.615 5.704 -2.444 2.715e-02 0.475 -3.514 GNA13 guanine nucleotide binding protein (G protein), alpha 13 17 -60435870 AW298099 17q24.3 Hs.515018 57

nucleotide binding

patterning of blood vessels

in utero embryonic development

GTPase activity

signal transducer activity

protein binding

GTP binding

cell motion

signal transduction

G-protein coupled receptor protein signaling pathway

protein kinase cascade

Rho protein signal transduction

regulation of cell shape

membrane

guanyl nucleotide binding

cell differentiation

platelet activation

regulation of cell migration

melanosome

Vascular smooth muscle contraction

Long-term depression

Regulation of actin cytoskeleton

214880_x_at -0.300 6.284 -2.444 2.717e-02 0.476 -3.515 CALD1 caldesmon 1 7 134114710, 134226698 D90453 7q33 Hs.490203 40

actin binding

calmodulin binding

tropomyosin binding

cytoskeleton

plasma membrane

cell motion

muscle contraction

myosin binding

Vascular smooth muscle contraction

207423_s_at -0.275 4.376 -2.444 2.718e-02 0.476 -3.516 ADAM20 ADAM metallopeptidase domain 20 14 -70058830 AF029899 14q24.1 Hs.177984 4

metalloendopeptidase activity

proteolysis

single fertilization

peptidase activity

zinc ion binding

membrane

integral to membrane

metal ion binding

 
223821_s_at 0.299 3.157 2.444 2.719e-02 0.476 -3.516 SUSD4 sushi domain containing 4 1 -221474874, -221460783 BC004888 1q41 Hs.497841 4

membrane

integral to membrane

 
1555002_at -0.187 1.909 -2.443 2.724e-02 0.476 -3.517 MGC39545 hypothetical protein LOC403312 11   BC036197 11q24.2 Hs.450611 1    
232124_at 0.267 3.430 2.443 2.724e-02 0.476 -3.518 LOC729085 hypothetical protein LOC729085 3 42995762 AL117530 3p22.1 Hs.146346 2    
201935_s_at -0.572 7.842 -2.442 2.728e-02 0.476 -3.519 EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 1 -21005560 AI768122 1p36.12 Hs.467084 19

RNA cap binding

translation initiation factor activity

protein binding

regulation of translational initiation

RNA metabolic process

eukaryotic translation initiation factor 4F complex

interspecies interaction between organisms

 
219398_at 0.454 5.793 2.442 2.728e-02 0.476 -3.519 CIDEC cell death-inducing DFFA-like effector c 3 -9883397 NM_022094 3p25.3 Hs.567562 Hs.635072 6

molecular_function

protein binding

intracellular

cytoplasm

cytosol

apoptosis

induction of apoptosis

 
242098_at 0.188 2.490 2.442 2.729e-02 0.476 -3.519 LOC202451 hypothetical protein LOC202451 6   AW953116 6q23.3 Hs.194408 1    
221661_at -0.220 3.784 -2.442 2.730e-02 0.476 -3.519 SLC22A7 solute carrier family 22 (organic anion transporter), member 7 6 43373975 AF210455 6p21.2-p21.1 Hs.485438 10

membrane fraction

plasma membrane

integral to plasma membrane

ion transport

ion transmembrane transporter activity

sodium-independent organic anion transmembrane transporter activity

organic anion transport

 
221101_at 0.190 3.520 2.441 2.730e-02 0.476 -3.519 C14orf113 chromosome 14 open reading frame 113 14   NM_017630 14q32.13 Hs.675410 1    
202301_s_at -0.415 7.267 -2.440 2.736e-02 0.476 -3.521 RSRC2 arginine/serine-rich coiled-coil 2 12 -121555225, -121555225 BE396879 12q24.31 Hs.432996 4    
219464_at -0.566 7.403 -2.440 2.736e-02 0.476 -3.521 CA14 carbonic anhydrase XIV 1 148496841 NM_012113 1q21 Hs.528988 11

carbonate dehydratase activity

zinc ion binding

membrane

integral to membrane

lyase activity

metal ion binding

Nitrogen metabolism

242578_x_at 0.242 7.287 2.439 2.744e-02 0.477 -3.524 SLC22A3 solute carrier family 22 (extraneuronal monoamine transporter), member 3 6 160689414 AV699746 6q26-q27 Hs.567337 33

transporter activity

protein binding

membrane fraction

integral to plasma membrane

ion transport

ion transmembrane transporter activity

quaternary ammonium group transmembrane transporter activity

quaternary ammonium group transport

monoamine transport

membrane

regulation of appetite

histamine uptake

 
203013_at -0.232 6.639 -2.438 2.748e-02 0.477 -3.525 ECD ecdysoneless homolog (Drosophila) 10 -74564288 NM_007265 10q22.1-q22.2 Hs.631822 11

transcription coactivator activity

nucleus

cytoplasm

regulation of glycolysis

transcription from RNA polymerase II promoter

regulation of transcription

 
235389_at -0.317 6.704 -2.438 2.748e-02 0.477 -3.525 PHF20 PHD finger protein 20 20 33823336 BG168139 20q11.22-q11.23 Hs.517044 11

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
211462_s_at 0.203 4.373 2.438 2.749e-02 0.477 -3.526 TBL1Y transducin (beta)-like 1Y-linked Y 6838726 AF332222 Yp11.2 Hs.664560 5

chromatin binding

protein binding

nucleus

transcription factor complex

regulation of transcription from RNA polymerase II promoter

modification-dependent protein catabolic process

regulation of transcription

Wnt signaling pathway

212761_at 0.245 7.824 2.438 2.749e-02 0.477 -3.526 TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 10 114699998 AI949687 10q25.3 Hs.593995 246

blood vessel development

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

anti-apoptosis

cell cycle arrest

beta-catenin binding

transcription factor binding

cell proliferation

positive regulation of specific transcription from RNA polymerase II promoter

positive regulation of heparan sulfate proteoglycan biosynthetic process

specific transcriptional repressor activity

protein kinase binding

pancreas development

positive regulation of insulin secretion

regulation of hormone metabolic process

glucose homeostasis

fat cell differentiation

regulation of transcription

myoblast cell fate commitment

Wnt receptor signaling pathway through beta-catenin

beta-catenin-TCF7L2 complex

Wnt signaling pathway

Adherens junction

Melanogenesis

Pathways in cancer

Colorectal cancer

Endometrial cancer

Prostate cancer

Thyroid cancer

Basal cell carcinoma

Acute myeloid leukemia

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

201643_x_at -0.229 8.231 -2.438 2.750e-02 0.477 -3.526 KDM3B lysine (K)-specific demethylase 3B 5 137716183 NM_016604 5q31 Hs.714832 14

iron ion binding

nucleus

nucleolus

zinc ion binding

oxidoreductase activity

chromatin modification

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

regulation of transcription

metal ion binding

oxidation reduction

 
205280_at 0.601 3.878 2.438 2.750e-02 0.477 -3.526 GLRB glycine receptor, beta 4 158216726 NM_000824 4q31.3 Hs.32973 14

startle response

ion channel activity

extracellular ligand-gated ion channel activity

protein binding

membrane fraction

plasma membrane

integral to plasma membrane

ion transport

chloride transport

neuropeptide signaling pathway

synaptic transmission

acrosome reaction

nervous system development

visual perception

adult walking behavior

glycine binding

extracellular-glycine-gated chloride channel activity

cell junction

neurotransmitter receptor activity

chloride ion binding

chloride channel complex

regulation of membrane potential

synapse

postsynaptic membrane

synaptic transmission, glycinergic

righting reflex

Neuroactive ligand-receptor interaction

201854_s_at -0.378 7.057 -2.438 2.751e-02 0.477 -3.526 ATMIN ATM interactor 16 79626958 AI744148 16q23.2 Hs.16349 Hs.589959 9

intracellular

nucleus

response to DNA damage stimulus

zinc ion binding

metal ion binding

 
1557736_at -0.195 2.689 -2.438 2.751e-02 0.477 -3.526 NKTR natural killer-tumor recognition sequence 3 42617150 AI880383 3p23-p21 Hs.529509 9

peptidyl-prolyl cis-trans isomerase activity

protein folding

cyclosporin A binding

membrane

isomerase activity

 
227834_at -0.485 9.571 -2.437 2.752e-02 0.477 -3.526 TXLNB taxilin beta 6 -139602893 AL589605 6q24.1 Hs.535820 12

cytoplasm

 
1568999_at -0.191 4.615 -2.437 2.753e-02 0.477 -3.527 PSG4 pregnancy specific beta-1-glycoprotein 4 19 -48388693 BC035419 19q13.2 Hs.654415 12

extracellular region

defense response

female pregnancy

 
230327_at 0.279 5.981 2.437 2.753e-02 0.477 -3.527 LOC730098 similar to chemokine (C-C motif) ligand 27 9   AI203673 9p13.3 Hs.459590      
203895_at 0.464 5.013 2.437 2.755e-02 0.477 -3.527 PLCB4 phospholipase C, beta 4 20 9024931 AL535113 20p12 Hs.472101 17

phosphoinositide phospholipase C activity

signal transducer activity

calcium ion binding

protein binding

intracellular signaling cascade

lipid catabolic process

hydrolase activity

Inositol phosphate metabolism

Metabolic pathways

Calcium signaling pathway

Chemokine signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Wnt signaling pathway

Gap junction

Long-term potentiation

Long-term depression

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Huntington's disease

208015_at 0.309 5.324 2.437 2.756e-02 0.477 -3.528 SMAD1 SMAD family member 1 4 146622400, 146623406 NM_015583 4q31 Hs.604588 118

MAPKKK cascade

mesodermal cell fate commitment

osteoblast fate commitment

transcription factor activity

RNA polymerase II transcription factor activity

receptor signaling protein activity

intracellular

nucleus

nucleoplasm

transcription factor complex

cytoplasm

cytosol

inflammatory response

signal transduction

transforming growth factor beta receptor signaling pathway

SMAD protein complex assembly

gamete generation

negative regulation of cell proliferation

embryonic pattern specification

positive regulation of gene expression

integral to membrane

transcription activator activity

BMP signaling pathway

BMP signaling pathway

transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity

midbrain development

hindbrain development

primary microRNA processing

homeostatic process

identical protein binding

positive regulation of osteoblast differentiation

positive regulation of transcription from RNA polymerase II promoter

co-SMAD binding

TGF-beta signaling pathway

235780_at 0.325 3.224 2.436 2.758e-02 0.478 -3.528 PRKACB protein kinase, cAMP-dependent, catalytic, beta 1 84316332, 84316332, 84382539 BE622723 1p36.1 Hs.487325 38

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

cAMP-dependent protein kinase activity

ATP binding

nucleus

cytoplasm

cAMP-dependent protein kinase complex

protein amino acid phosphorylation

signal transduction

G-protein signaling, coupled to cAMP nucleotide second messenger

protein kinase cascade

hormone-mediated signaling

transferase activity

MAPK signaling pathway

Calcium signaling pathway

Chemokine signaling pathway

Apoptosis

Vascular smooth muscle contraction

Wnt signaling pathway

Hedgehog signaling pathway

Gap junction

Long-term potentiation

Olfactory transduction

Taste transduction

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Prion diseases

Vibrio cholerae infection

218638_s_at 0.309 6.922 2.436 2.760e-02 0.478 -3.529 SPON2 spondin 2, extracellular matrix protein 4 -1150720, -1150720 NM_012445 4p16.3 Hs.302963 11

protein binding

extracellular region

proteinaceous extracellular matrix

immune response

cell adhesion

axon guidance

 
221602_s_at 0.391 5.142 2.436 2.760e-02 0.478 -3.529 FAIM3 Fas apoptotic inhibitory molecule 3 1 -205143252, -205143252 AF057557 1q32.1 Hs.58831 Hs.719320 10

nucleus

cytoplasm

plasma membrane

focal adhesion

anti-apoptosis

immune response

cellular defense response

integral to membrane

 
203339_at -0.458 8.822 -2.435 2.764e-02 0.478 -3.530 SLC25A12 solute carrier family 25 (mitochondrial carrier, Aralar), member 12 2 -172348160 AI887457 2q24 Hs.470608 27

transporter activity

L-glutamate transmembrane transporter activity

calcium ion binding

protein binding

mitochondrion

mitochondrial inner membrane

transport

L-aspartate transmembrane transporter activity

aspartate transport

L-glutamate transport

membrane

integral to membrane

malate-aspartate shuttle

response to calcium ion

 
242595_at -0.173 3.058 -2.435 2.764e-02 0.478 -3.530 TSSK4 testis-specific serine kinase 4 14 23744801 AI218614 14q12 Hs.314432 6

nucleotide binding

magnesium ion binding

magnesium ion binding

protein serine/threonine kinase activity

protein serine/threonine kinase activity

protein binding

ATP binding

ATP binding

protein amino acid phosphorylation

protein amino acid phosphorylation

multicellular organismal development

spermatogenesis

transferase activity

cell differentiation

positive regulation of CREB transcription factor activity

 
208383_s_at 0.433 2.944 2.435 2.767e-02 0.478 -3.531 PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) 20 55569542 NM_002591 20q13.31 Hs.1872 40

magnesium ion binding

phosphoenolpyruvate carboxykinase (GTP) activity

phosphoenolpyruvate carboxykinase (GTP) activity

GTP binding

nucleus

nucleolus

cytoplasm

centrosome

cytosol

gluconeogenesis

lipid metabolic process

lyase activity

purine nucleotide binding

manganese ion binding

carboxylic acid binding

response to insulin stimulus

glucose homeostasis

glycerol biosynthetic process from pyruvate

Glycolysis / Gluconeogenesis

Citrate cycle (TCA cycle)

Pyruvate metabolism

Metabolic pathways

PPAR signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

205039_s_at 0.247 6.700 2.435 2.767e-02 0.478 -3.531 IKZF1 IKAROS family zinc finger 1 (Ikaros) 7 50314923 NM_006060 7p13-p11.1 Hs.435949 Hs.488251 52

DNA binding

intracellular

nucleus

mesoderm development

zinc ion binding

regulation of transcription

metal ion binding

 
1556854_at 0.420 2.878 2.434 2.770e-02 0.478 -3.532 LOC283501 hypothetical protein LOC283501 13   AA921835 13q34 Hs.666761 1    
228870_at 0.223 5.337 2.434 2.771e-02 0.478 -3.532 FAM84B family with sequence similarity 84, member B 8 -127633868 BF732683 8q24.21 Hs.124951 5

protein binding

cytoplasm

plasma membrane

 
218782_s_at 0.271 3.153 2.434 2.772e-02 0.478 -3.533 ATAD2 ATPase family, AAA domain containing 2 8 -124401271 NM_014109 8q24.13 Hs.370834 9

nucleotide binding

transcription factor activity

ATP binding

nucleus

hydrolase activity

nucleoside-triphosphatase activity

ATPase activity, uncoupled

regulation of transcription

 
208361_s_at -0.222 6.380 -2.434 2.772e-02 0.478 -3.533 POLR3D polymerase (RNA) III (DNA directed) polypeptide D, 44kDa 8 22158563 NM_001722 8q21 Hs.148342 10

DNA binding

DNA-directed RNA polymerase activity

nucleus

DNA-directed RNA polymerase III complex

transcription

transcription from RNA polymerase III promoter

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

207773_x_at -0.275 3.682 -2.434 2.773e-02 0.478 -3.533 CYP3A43 cytochrome P450, family 3, subfamily A, polypeptide 43 7 99263571 NM_022820 7q21.1 Hs.306220 Hs.654391 Hs.695915 17

endoplasmic reticulum

microsome

electron carrier activity

membrane

heme binding

metal ion binding

oxidation reduction

aromatase activity

gamma-Hexachlorocyclohexane degradation

Linoleic acid metabolism

Retinol metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

Drug metabolism - other enzymes

Metabolic pathways

204092_s_at 1.091 6.963 2.433 2.775e-02 0.478 -3.534 AURKA aurora kinase A 20 -54377851 NM_003600 20q13.2-q13.3 Hs.250822 196

nucleotide binding

mitotic cell cycle

protein serine/threonine kinase activity

protein binding

protein binding

ATP binding

nucleus

centrosome

spindle

protein amino acid phosphorylation

spindle organization

mitosis

transferase activity

ubiquitin protein ligase binding

regulation of protein stability

phosphoinositide-mediated signaling

 
234542_at 0.241 2.802 2.433 2.776e-02 0.478 -3.534 ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 11 119713155 AL080067 11q23.3 Hs.24598 26

G-protein-coupled receptor binding

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

GTPase activator activity

protein binding

intracellular

cytoplasm

G-protein coupled receptor protein signaling pathway

intracellular signaling cascade

membrane

regulation of Rho protein signal transduction

Vascular smooth muscle contraction

Axon guidance

Regulation of actin cytoskeleton

243722_at -0.251 4.874 -2.433 2.778e-02 0.478 -3.535 PYDC1 PYD (pyrin domain) containing 1 16 -31134783 W73523 16p11.2 Hs.58314 7

cysteine-type endopeptidase activity

protein binding

nucleus

cytoplasm

cytosol

negative regulation of protein kinase activity

proteolysis

IkappaB kinase complex

negative regulation of NF-kappaB transcription factor activity

tumor necrosis factor-mediated signaling pathway

innate immune response

positive regulation of interleukin-1 beta secretion

 
236779_at 0.261 5.219 2.433 2.778e-02 0.478 -3.535 MRPS5 mitochondrial ribosomal protein S5 2 -95116678 BG539414 2p11.2-q11.2 Hs.655259 9

RNA binding

structural constituent of ribosome

protein binding

intracellular

mitochondrion

ribosome

translation

 
204722_at 0.747 6.199 2.432 2.782e-02 0.479 -3.536 SCN3B sodium channel, voltage-gated, type III, beta 11 -123005104 AW007335 11q23.3 Hs.4865 19

voltage-gated ion channel activity

voltage-gated sodium channel activity

plasma membrane

ion transport

sodium ion transport

integral to membrane

sodium ion binding

 
213540_at 0.415 7.653 2.431 2.786e-02 0.479 -3.537 HSD17B8 hydroxysteroid (17-beta) dehydrogenase 8 6 33280396, 4552579, 4358588 AL031228 6p21.3 Hs.415058 18

estradiol 17-beta-dehydrogenase activity

retinoid-X receptor activity

binding

cellular_component

membrane fraction

mitochondrion

mitochondrial envelope

plasma membrane

estrogen biosynthetic process

androgen metabolic process

oxidoreductase activity

thyroid hormone receptor coactivator activity

vitamin D receptor binding

retinoic acid receptor binding

thyroid hormone receptor binding

protein heterodimerization activity

testosterone 17-beta-dehydrogenase activity

oxidation reduction

Androgen and estrogen metabolism

Metabolic pathways

215705_at 0.249 5.818 2.431 2.787e-02 0.479 -3.537 PPP5C protein phosphatase 5, catalytic subunit 19 51542133 BC000750 19q13.3 Hs.654604 39

protein serine/threonine phosphatase activity

signal transducer activity

iron ion binding

protein binding

nucleus

cytoplasm

transcription

protein amino acid dephosphorylation

mitosis

hydrolase activity

manganese ion binding

positive regulation of I-kappaB kinase/NF-kappaB cascade

metal ion binding

MAPK signaling pathway

244699_at 0.275 4.775 2.431 2.788e-02 0.479 -3.538 AHI1 Abelson helper integration site 1 6 -135750615, -135646804 AV658469 6q23.3 Hs.386684 30    
224504_s_at -0.211 6.374 -2.431 2.789e-02 0.479 -3.538 BUD13 BUD13 homolog (S. cerevisiae) 11 -116124097 BC006350 11q23.3 Hs.437341 9    
219098_at 0.340 6.941 2.430 2.793e-02 0.479 -3.539 MYBBP1A MYB binding protein (P160) 1a 17 -4388939 NM_014520 17p13.3 Hs.22824 24

DNA binding

DNA-directed DNA polymerase activity

nucleus

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

nucleocytoplasmic transport

transcription factor binding

NLS-dependent protein nuclear import complex

 
220277_at 0.275 4.774 2.430 2.793e-02 0.479 -3.539 CXXC4 CXXC finger 4 4 -105612791 NM_025212 4q22-q24 Hs.12248 3

DNA binding

cytoplasm

zygotic determination of dorsal/ventral axis

zinc ion binding

cytoplasmic membrane-bounded vesicle

PDZ domain binding

negative regulation of Wnt receptor signaling pathway

metal ion binding

Wnt signaling pathway

205762_s_at 0.291 4.496 2.430 2.793e-02 0.479 -3.539 DUS4L dihydrouridine synthase 4-like (S. cerevisiae) 7 106991667 NM_007016 7q22-q31 Hs.97627 5

tRNA processing

oxidoreductase activity

tRNA dihydrouridine synthase activity

FAD binding

oxidation reduction

 
208868_s_at -0.325 6.745 -2.429 2.798e-02 0.480 -3.541 GABARAPL1 GABA(A) receptor-associated protein like 1 12 10256755 BF125756 12p13.2 Hs.524250 18

protein binding

intracellular

cytoplasm

autophagic vacuole

endoplasmic reticulum

Golgi apparatus

microtubule

membrane

beta-tubulin binding

GABA receptor binding

Regulation of autophagy

203479_s_at -0.246 5.403 -2.428 2.802e-02 0.480 -3.542 OTUD4 OTU domain containing 4 4 -146299738, -146274251 T79216 4q31.21 Hs.270851 13

molecular_function

protein binding

cellular_component

biological_process

 
209203_s_at -0.445 6.425 -2.428 2.804e-02 0.480 -3.543 BICD2 bicaudal D homolog 2 (Drosophila) 9 -94513465 BC002327 9q22.31 Hs.436939 15

protein binding

cytoplasm

Golgi apparatus

cytoskeleton

transport

microtubule-based movement

 
201030_x_at 0.736 10.837 2.428 2.804e-02 0.480 -3.543 LDHB lactate dehydrogenase B 12 -21679542 NM_002300 12p12.2-p12.1 Hs.446149 27

L-lactate dehydrogenase activity

binding

cytoplasm

oxidoreductase activity

anaerobic glycolysis

cellular carbohydrate metabolic process

oxidation reduction

Glycolysis / Gluconeogenesis

Cysteine and methionine metabolism

Pyruvate metabolism

Propanoate metabolism

Metabolic pathways

203397_s_at -0.196 2.696 -2.428 2.805e-02 0.480 -3.543 GALNT3 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3) 2 -166312558 BF063271 2q24-q31 Hs.170986 24

polypeptide N-acetylgalactosaminyltransferase activity

calcium ion binding

sugar binding

membrane fraction

Golgi apparatus

carbohydrate metabolic process

membrane

integral to membrane

transferase activity, transferring glycosyl groups

protein amino acid O-linked glycosylation via serine

protein amino acid O-linked glycosylation via threonine

manganese ion binding

perinuclear region of cytoplasm

O-Glycan biosynthesis

Metabolic pathways

1554769_at 0.237 3.037 2.427 2.807e-02 0.480 -3.544 ZNF785 zinc finger protein 785 16 -30499494 BC040642 16p11.2 Hs.513509 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1566957_at -0.244 4.871 -2.427 2.807e-02 0.480 -3.544 OR7E104P olfactory receptor, family 7, subfamily E, member 104 pseudogene 13   AL137719 13q21.31 Hs.568153      
222838_at 0.369 2.920 2.427 2.807e-02 0.480 -3.544 SLAMF7 SLAM family member 7 1 158975700 AL121985 1q23.1-q24.1 Hs.517265 21

receptor activity

cell adhesion

membrane

integral to membrane

natural killer cell activation

natural killer cell mediated cytotoxicity

 
1569111_at -0.405 4.337 -2.426 2.814e-02 0.480 -3.546 SOX13 SRY (sex determining region Y)-box 13 1 202308868 BC040649 1q32 Hs.201671 19

transcription factor activity

nucleus

anatomical structure morphogenesis

sequence-specific DNA binding

regulation of transcription

 
210011_s_at -0.152 6.699 -2.426 2.814e-02 0.480 -3.546 EWSR1 Ewing sarcoma breakpoint region 1 22 27993997, 27993997 BC000527 22q12.2 Hs.374477 90

nucleotide binding

RNA binding

calmodulin binding

intracellular

nucleus

cytoplasm

plasma membrane

zinc ion binding

regulation of transcription

metal ion binding

 
208066_s_at -0.363 6.996 -2.426 2.815e-02 0.480 -3.546 GTF2B general transcription factor IIB 1 -89090908 NM_001514 1p22-p21 Hs.481852 98

translation initiation factor activity

protein binding

nucleus

nucleoplasm

transcription factor complex

regulation of transcription, DNA-dependent

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

translational initiation

zinc ion binding

general RNA polymerase II transcription factor activity

transcription regulator activity

interspecies interaction between organisms

metal ion binding

Basal transcription factors

217911_s_at -0.248 10.389 -2.426 2.817e-02 0.480 -3.547 BAG3 BCL2-associated athanogene 3 10 121400871 NM_004281 10q25.2-q26.2 Hs.523309 37

protein binding

cellular_component

cytosol

protein folding

anti-apoptosis

 
233375_at 0.704 6.225 2.425 2.819e-02 0.480 -3.547 EFCAB2 EF-hand calcium binding domain 2 1 243199793, 243199906, 243200253, 243200253 AK001393 1q44 Hs.134857 5

calcium ion binding

 
202426_s_at 0.391 6.486 2.425 2.819e-02 0.480 -3.547 RXRA retinoid X receptor, alpha 9 136358136 BE675800 9q34.3 Hs.590886 190

transcription factor activity

ligand-regulated transcription factor activity

steroid hormone receptor activity

transcription coactivator activity

retinoid-X receptor activity

steroid binding

protein binding

nucleus

regulation of transcription, DNA-dependent

vitamin metabolic process

cholesterol metabolic process

zinc ion binding

response to retinoic acid

vitamin D receptor binding

sequence-specific DNA binding

interspecies interaction between organisms

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

retinoic acid receptor signaling pathway

ventricular cardiac muscle morphogenesis

ventricular cardiac muscle cell differentiation

cardiac muscle cell proliferation

vitamin D response element binding

PPAR signaling pathway

Adipocytokine signaling pathway

Pathways in cancer

Thyroid cancer

Small cell lung cancer

Non-small cell lung cancer

1553364_at 0.196 2.841 2.425 2.821e-02 0.480 -3.548 PNPLA1 patatin-like phospholipase domain containing 1 6 36318922, 36318957, 36346214 NM_173676 6p21.31 Hs.407002 5

metabolic process

lipid catabolic process

hydrolase activity

 
220773_s_at -0.286 5.619 -2.425 2.823e-02 0.480 -3.549 GPHN gephyrin 14 66043877 NM_020806 14q23.3 Hs.208765 29

nucleotide binding

magnesium ion binding

catalytic activity

protein binding

intracellular

cytoplasm

cytoskeleton

plasma membrane

Mo-molybdopterin cofactor biosynthetic process

establishment of synaptic specificity at neuromuscular junction

cell junction

synapse

postsynaptic membrane

 
226642_s_at -0.290 7.567 -2.424 2.824e-02 0.480 -3.549 NUDCD2 NudC domain containing 2 5 -162813163 BF735901 5q34 Hs.140443 7

intracellular

 
217364_x_at -0.377 5.559 -2.424 2.824e-02 0.480 -3.549 EIF3J eukaryotic translation initiation factor 3, subunit J 15 42616557 AL031313 15q21.1 Hs.404056 19

translation initiation factor activity

protein binding

cytoplasm

cytosol

eukaryotic translation initiation factor 3 complex

translational initiation

 
1557081_at 0.438 6.924 2.424 2.825e-02 0.480 -3.549 RBM25 RNA binding motif protein 25 14 72594973 AA580691 14q24.3 Hs.531106 13

nucleotide binding

nuclear mRNA splicing, via spliceosome

nucleic acid binding

mRNA binding

cellular_component

nucleus

cytoplasm

nuclear speck

 
213574_s_at -0.340 8.607 -2.424 2.826e-02 0.480 -3.549 KPNB1 karyopherin (importin) beta 1 17 43082273 AA861608 17q21.32 Hs.532793 Hs.706168 113

protein import into nucleus, docking

protein import into nucleus, translocation

nucleus

nuclear pore

nucleoplasm

cytoplasm

cytosol

NLS-bearing substrate import into nucleus

ribosomal protein import into nucleus

nuclear localization sequence binding

zinc ion binding

protein transporter activity

protein domain specific binding

interspecies interaction between organisms

 
214172_x_at -0.266 5.901 -2.424 2.826e-02 0.480 -3.550 RYK RYK receptor-like tyrosine kinase 3 -135358667 BG032035 3q22 Hs.654562 13

nucleotide binding

transmembrane receptor protein tyrosine kinase activity

receptor activity

ATP binding

membrane fraction

plasma membrane

integral to plasma membrane

protein amino acid phosphorylation

signal transduction

axonogenesis

transferase activity

Wnt-protein binding

Wnt receptor activity

skeletal system morphogenesis

 
211985_s_at -0.365 10.126 -2.424 2.827e-02 0.480 -3.550 CALM1 calmodulin 1 (phosphorylase kinase, delta) 14 89933125 AI653730 14q24-q31 Hs.282410 Hs.708270 181  

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Glioma

209770_at 0.344 5.674 2.424 2.828e-02 0.480 -3.550 BTN3A1 butyrophilin, subfamily 3, member A1 6 26510443 U90552 6p22.1 Hs.191510 Hs.628564 10

lipid metabolic process

membrane

integral to membrane

 
219566_at -0.351 7.622 -2.424 2.828e-02 0.480 -3.550 PLEKHF1 pleckstrin homology domain containing, family F (with FYVE domain) member 1 19 34848166 NM_024310 19q12 Hs.466383 5

nucleus

cytoplasm

lysosome

apoptosis

induction of apoptosis

zinc ion binding

metal ion binding

perinuclear region of cytoplasm

 
225075_at -0.265 7.320 -2.423 2.829e-02 0.480 -3.551 PDRG1 p53 and DNA-damage regulated 1 20 -29996418 AL031658 20q11.21 Hs.435755 6

cytoplasm

protein folding

prefoldin complex

unfolded protein binding

 
209895_at -0.759 5.951 -2.423 2.833e-02 0.481 -3.552 PTPN11 protein tyrosine phosphatase, non-receptor type 11 12 111340918 AF119855 12q24 Hs.506852 Hs.646231 326

non-membrane spanning protein tyrosine phosphatase activity

non-membrane spanning protein tyrosine phosphatase activity

protein binding

cytoplasm

cytosol

protein amino acid dephosphorylation

signal transduction

hydrolase activity

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Adipocytokine signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

Renal cell carcinoma

Chronic myeloid leukemia

203632_s_at -0.249 7.897 -2.423 2.834e-02 0.481 -3.552 GPRC5B G protein-coupled receptor, family C, group 5, member B 16 -19777793 NM_016235 16p12 Hs.148685 8

receptor activity

G-protein coupled receptor activity

nucleus

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

integral to membrane

cytoplasmic vesicle

 
214775_at -0.205 4.810 -2.422 2.837e-02 0.481 -3.553 N4BP3 Nedd4 binding protein 3 5 177473161 AW139448 5q35.3 Hs.101761 4

cytoplasm

membrane

cytoplasmic vesicle

 
204689_at 0.364 4.675 2.422 2.837e-02 0.481 -3.553 HHEX hematopoietically expressed homeobox 10 94439660 NM_001529 10q23.33 Hs.118651 86

liver development

transcription factor activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

mRNA export from nucleus

cell cycle

multicellular organismal development

transcription factor binding

eukaryotic initiation factor 4E binding

organ morphogenesis

anterior/posterior pattern formation

positive regulation of specific transcription from RNA polymerase II promoter

negative regulation of specific transcription from RNA polymerase II promoter

negative regulation of angiogenesis

transcription repressor activity

cell differentiation

positive regulation of Wnt receptor signaling pathway

thyroid gland development

forebrain development

negative regulation of vascular endothelial growth factor receptor signaling pathway

embryonic heart tube development

regulation of cell proliferation

sequence-specific DNA binding

Maturity onset diabetes of the young

212870_at -0.517 9.163 -2.422 2.838e-02 0.481 -3.553 SOS2 son of sevenless homolog 2 (Drosophila) 14 -49653595 AI628605 14q21 Hs.291533 20

DNA binding

Rho guanyl-nucleotide exchange factor activity

protein binding

cellular_component

intracellular

regulation of Rho protein signal transduction

regulation of small GTPase mediated signal transduction

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

Dorso-ventral axis formation

Focal adhesion

Gap junction

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Insulin signaling pathway

GnRH signaling pathway

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Endometrial cancer

Glioma

Prostate cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Non-small cell lung cancer

200930_s_at -0.176 3.383 -2.421 2.843e-02 0.481 -3.555 VCL vinculin 10 75427877 AA156675 10q22.2 Hs.643896 78

actin binding

structural molecule activity

cytoplasm

plasma membrane

cell-cell junction

adherens junction

focal adhesion

cell motion

cell adhesion

actin cytoskeleton

oxidoreductase activity

lamellipodium assembly

cell-substrate junction

negative regulation of cell migration

costamere

protein complex

apical junction assembly

alpha-catenin binding

Focal adhesion

Adherens junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

202780_at 1.039 7.181 2.421 2.843e-02 0.481 -3.555 OXCT1 3-oxoacid CoA transferase 1 5 -41765923 NM_000436 5p13.1 Hs.278277 15

mitochondrion

mitochondrion

mitochondrial matrix

mitochondrial matrix

metabolic process

3-oxoacid CoA-transferase activity

3-oxoacid CoA-transferase activity

transferase activity

protein homodimerization activity

ketone body catabolic process

Synthesis and degradation of ketone bodies

Valine, leucine and isoleucine degradation

Butanoate metabolism

223875_s_at -0.336 4.416 -2.421 2.844e-02 0.481 -3.555 EPC1 enhancer of polycomb homolog 1 (Drosophila) 10 -32597864 AF277374 10p11 Hs.167805 Hs.510635 Hs.621281 16

negative regulation of transcription from RNA polymerase II promoter

histone acetyltransferase activity

nucleus

nucleoplasm

transcription activator activity

transcription repressor activity

chromatin modification

nuclear membrane

Piccolo NuA4 histone acetyltransferase complex

NuA4 histone acetyltransferase complex

regulation of growth

histone H4 acetylation

histone H2A acetylation

regulation of transcription

negative regulation of gene expression, epigenetic

positive regulation of transcription from RNA polymerase II promoter

 
219207_at -0.245 5.522 -2.421 2.845e-02 0.481 -3.555 EDC3 enhancer of mRNA decapping 3 homolog (S. cerevisiae) 15 -72709952 NM_025083 15q24.1 Hs.682454 Hs.96852 16

cytoplasmic mRNA processing body

protein binding

cytoplasm

RNA degradation

238303_at 0.272 4.128 2.421 2.845e-02 0.481 -3.555 STT3B STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) 3 31549494 AW070371 3p23 Hs.475812 9

dolichyl-diphosphooligosaccharide-protein glycotransferase activity

protein binding

endoplasmic reticulum

protein amino acid glycosylation

membrane

integral to membrane

transferase activity

N-Glycan biosynthesis

Metabolic pathways

225063_at 0.283 7.547 2.420 2.846e-02 0.481 -3.556 UBL7 ubiquitin-like 7 (bone marrow stromal cell-derived) 15 -72525370, -72525370 BF568780 15q24.1 Hs.334713 7

protein binding

modification-dependent protein catabolic process

 
208463_at 0.280 4.592 2.420 2.848e-02 0.481 -3.556 GABRA4 gamma-aminobutyric acid (GABA) A receptor, alpha 4 4 -46615673 NM_000809 4p12 Hs.248112 17

GABA-A receptor activity

ion channel activity

extracellular ligand-gated ion channel activity

chloride channel activity

plasma membrane

integral to plasma membrane

ion transport

chloride transport

gamma-aminobutyric acid signaling pathway

benzodiazepine receptor activity

cell junction

chloride ion binding

chloride channel complex

synapse

postsynaptic membrane

Neuroactive ligand-receptor interaction

224452_s_at -0.538 9.919 -2.420 2.850e-02 0.481 -3.557 C7orf70 chromosome 7 open reading frame 70 7 -6335564 BC006110 7p22.1 Hs.696146 4

nucleus

 
210707_x_at 0.323 6.523 2.420 2.851e-02 0.481 -3.557 PMS2L11 postmeiotic segregation increased 2-like 11 pseudogene 7 76448074 U38980 7q11.23 Hs.675888 5    
823_at -0.402 6.266 -2.419 2.852e-02 0.481 -3.558 CX3CL1 chemokine (C-X3-C motif) ligand 1 16 55963914 U84487 16q13 Hs.531668 100

extracellular region

extracellular space

plasma membrane

chemotaxis

defense response

immune response

cell adhesion

chemokine activity

cell surface

integral to membrane

cytokine-mediated signaling pathway

leukocyte chemotaxis

positive regulation of inflammatory response

leukocyte adhesive activation

positive regulation of calcium-independent cell-cell adhesion

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

1569617_at 0.225 4.959 2.419 2.853e-02 0.481 -3.558 OSBP2 oxysterol binding protein 2 22 29420792 BC018025 22q12.2 Hs.517546 11

lipid transport

steroid metabolic process

membrane

 
229034_at -0.453 4.997 -2.419 2.854e-02 0.481 -3.558 SOBP sine oculis binding protein homolog (Drosophila) 6 107918009 BF511724 6q21 Hs.445244 4

zinc ion binding

metal ion binding

 
1559927_a_at -0.174 5.299 -2.419 2.856e-02 0.481 -3.559 LOC728353 hypothetical protein LOC728353 14   BC031683 14q11.2 Hs.621210      
1555942_a_at -0.199 3.760 -2.418 2.857e-02 0.481 -3.559 LOC642587 NPC-A-5 1 207668790 AK091113 1q32.2 Hs.510543 2    
213140_s_at -0.227 7.115 -2.418 2.861e-02 0.481 -3.560 SS18L1 synovial sarcoma translocation gene on chromosome 18-like 1 20 60152216 AB014593 20q13.3 Hs.154429 10

condensed nuclear chromosome, centromeric region

protein binding

dendrite development

 
218031_s_at -0.399 8.265 -2.418 2.861e-02 0.481 -3.560 FOXN3 forkhead box N3 14 -88692268, -88692268 NM_018589 14q31.3 Hs.434286 Hs.621371 16

DNA damage checkpoint

G2 phase of mitotic cell cycle

transcription factor activity

nucleus

cell cycle

protein C-terminus binding

transcription repressor activity

sequence-specific DNA binding

negative regulation of transcription, DNA-dependent

 
226028_at 0.294 7.036 2.418 2.861e-02 0.481 -3.560 ROBO4 roundabout homolog 4, magic roundabout (Drosophila) 11 -124259324 AA156022 11q24.2 Hs.524121 19

angiogenesis

receptor activity

multicellular organismal development

integral to membrane

cell differentiation

regulation of cell migration

 
232235_at 0.468 2.882 2.417 2.863e-02 0.481 -3.561 DSEL dermatan sulfate epimerase-like 18 -63324798 AK021539 18q22.1 Hs.124673 6

membrane

integral to membrane

 
200959_at 0.275 8.375 2.417 2.865e-02 0.481 -3.562 FUS fusion (involved in t(12;16) in malignant liposarcoma) 16 31098953 NM_004960 16p11.2 Hs.513522 55

nuclear mRNA splicing, via spliceosome

DNA binding

RNA binding

protein binding

intracellular

nucleus

nucleolus

cell death

zinc ion binding

metal ion binding

 
1554745_at -0.169 4.380 -2.417 2.865e-02 0.481 -3.562 RALGPS1 Ral GEF with PH domain and SH3 binding motif 1 9 128716873 BC032372 9q33.3 Hs.648175 4

guanyl-nucleotide exchange factor activity

cellular_component

intracellular

cytoplasm

plasma membrane

small GTPase mediated signal transduction

 
213897_s_at 0.325 8.690 2.417 2.866e-02 0.481 -3.562 MRPL23 mitochondrial ribosomal protein L23 11 1925077 AI832239 11p15.5-p15.4 Hs.3254 11

nucleotide binding

RNA binding

structural constituent of ribosome

intracellular

mitochondrion

mitochondrial large ribosomal subunit

ribosome

translation

 
202555_s_at 0.539 6.203 2.416 2.868e-02 0.482 -3.562 MYLK myosin light chain kinase 3 -124813832, -124813832 NM_005965 3q21 Hs.477375 56

nucleotide binding

magnesium ion binding

actin binding

myosin light chain kinase activity

calcium ion binding

calmodulin binding

ATP binding

protein amino acid phosphorylation

transferase activity

Calcium signaling pathway

Vascular smooth muscle contraction

Focal adhesion

Regulation of actin cytoskeleton

230864_at -0.271 4.637 -2.415 2.876e-02 0.482 -3.565 MGC42105 serine/threonine-protein kinase NIM1 5 43228083 BF222940 5p12 Hs.25845 4

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

transferase activity

 
213151_s_at -0.264 9.516 -2.414 2.880e-02 0.482 -3.566 SEPT7 septin 7 7 35807151 AU157515 7p14.3-p14.1 Hs.191346 Hs.642540 23

nucleotide binding

condensed chromosome kinetochore

cytokinesis

stress fiber

structural molecule activity

protein binding

GTP binding

nucleus

cytoplasm

spindle

cell cycle

mitosis

septin complex

protein heterooligomerization

 
1569796_s_at 0.303 4.522 2.414 2.882e-02 0.482 -3.567 ATRNL1 attractin-like 1 10 116843113 BC035157 10q26 Hs.501127 3

binding

sugar binding

membrane

integral to membrane

 
217010_s_at -0.260 2.687 -2.414 2.882e-02 0.482 -3.567 CDC25C cell division cycle 25 homolog C (S. pombe) 5 -137648857 AF277724 5q31 Hs.656 108

regulation of cyclin-dependent protein kinase activity

protein tyrosine phosphatase activity

protein binding

cellular_component

intracellular

nucleus

nucleoplasm

cytoplasm

cytosol

DNA replication

protein amino acid dephosphorylation

cell cycle

regulation of mitosis

traversing start control point of mitotic cell cycle

cell proliferation

hydrolase activity

interspecies interaction between organisms

WW domain binding

cell division

Cell cycle

207826_s_at -0.498 7.107 -2.414 2.883e-02 0.482 -3.567 ID3 inhibitor of DNA binding 3, dominant negative helix-loop-helix protein 1 -23756995 NM_002167 1p36.13-p36.12 Hs.76884 41

negative regulation of transcription from RNA polymerase II promoter

transcription corepressor activity

nucleus

nucleus

regulation of DNA replication

multicellular organismal development

heart development

transcription factor binding

response to wounding

negative regulation of transcription

protein domain specific binding

neuron differentiation

epithelial cell differentiation

positive regulation of apoptosis

negative regulation of transcription factor activity

TGF-beta signaling pathway

1555167_s_at -0.496 6.552 -2.414 2.883e-02 0.482 -3.567 NAMPT nicotinamide phosphoribosyltransferase 7 -105675967 BC020691 7q22.3 Hs.489615 98

cytokine activity

cytoplasm

cytosol

signal transduction

cell-cell signaling

positive regulation of cell proliferation

NAD biosynthetic process

transferase activity, transferring glycosyl groups

pyridine nucleotide biosynthetic process

nicotinamide phosphoribosyltransferase activity

nicotinamide phosphoribosyltransferase activity

Nicotinate and nicotinamide metabolism

225183_at -0.270 8.512 -2.414 2.884e-02 0.482 -3.567 C16orf72 chromosome 16 open reading frame 72 16 9093037 BG495327 16p13.2 Hs.221497 3    
230298_at 0.343 6.354 2.413 2.885e-02 0.482 -3.568 MBLAC2 metallo-beta-lactamase domain containing 2 5 -89789775 AI692906 5q14.3 Hs.64004 2

zinc ion binding

hydrolase activity

metal ion binding

 
1554126_at -0.333 8.070 -2.413 2.887e-02 0.483 -3.568 MSRB3 methionine sulfoxide reductase B3 12 63958754 BC040053 12q14.3 Hs.339024 6

mitochondrion

endoplasmic reticulum

peptide-methionine-(S)-S-oxide reductase activity

zinc ion binding

oxidoreductase activity

metal ion binding

oxidation reduction

 
218918_at 0.247 5.636 2.412 2.894e-02 0.483 -3.570 MAN1C1 mannosidase, alpha, class 1C, member 1 1 25816545 NM_020379 1p35 Hs.197043 26

mannosyl-oligosaccharide 1,2-alpha-mannosidase activity

calcium ion binding

Golgi apparatus

protein amino acid N-linked glycosylation

metabolic process

membrane

integral to membrane

hydrolase activity, acting on glycosyl bonds

integral to Golgi membrane

N-Glycan biosynthesis

Metabolic pathways

220123_at 0.549 3.457 2.412 2.895e-02 0.483 -3.571 SLC35F5 solute carrier family 35, member F5 2 -114188402 NM_025181 2q14.1 Hs.632527 2

transport

membrane

integral to membrane

 
216265_x_at 0.328 12.421 2.411 2.896e-02 0.483 -3.571 MYH7 myosin, heavy chain 7, cardiac muscle, beta 14 -22951786 AI292276 14q12 Hs.678918 129

microfilament motor activity

nucleotide binding

regulation of heart rate

actin binding

calmodulin binding

ATP binding

nucleus

nucleolus

cytoplasm

striated muscle thick filament

focal adhesion

ATP catabolic process

striated muscle contraction

adult heart development

structural constituent of muscle

myosin complex

ATPase activity

muscle filament sliding

actin-dependent ATPase activity

ventricular cardiac muscle morphogenesis

Cardiac muscle contraction

Tight junction

Hypertrophic cardiomyopathy (HCM)

201652_at -0.200 9.954 -2.411 2.897e-02 0.483 -3.571 COPS5 COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis) 8 -68117868 NM_006837 8q13.1 Hs.491912 79

protein deneddylation

transcription coactivator activity

translation initiation factor activity

protein binding

nucleus

nucleolus

cytoplasm

eukaryotic translation initiation factor 3 complex

transcription from RNA polymerase II promoter

translation

signalosome

peptidase activity

metallopeptidase activity

metal ion binding

regulation of cell cycle

 
202397_at 0.224 9.555 2.411 2.897e-02 0.483 -3.571 NUTF2 nuclear transport factor 2 16 66438319 NM_005796 16q22.1 Hs.719219 19

transporter activity

protein binding

intracellular

nuclear pore

cytoplasm

cytosol

protein import into nucleus

protein transporter activity

protein transport

 
227693_at -0.373 6.115 -2.411 2.898e-02 0.484 -3.572 WDR20 WD repeat domain 20 14 101675964, 101675964, 101675964 AI092930 14q32.31 Hs.36859 7    
225342_at 0.543 5.487 2.411 2.900e-02 0.484 -3.572 AK3L1 adenylate kinase 3-like 1 1 65385819, 65386100, 65386473 AK026966 1p31.3 Hs.10862 Hs.592601 10

nucleotide binding

adenylate kinase activity

ATP binding

GTP binding

mitochondrion

mitochondrial matrix

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

transferase activity

Purine metabolism

Metabolic pathways

204732_s_at -0.399 6.011 -2.411 2.901e-02 0.484 -3.572 TRIM23 tripartite motif-containing 23 5 -64921262 AI021991 5q12.3 Hs.792 14

Golgi membrane

nucleotide binding

GTPase activity

ubiquitin-protein ligase activity

protein binding

GTP binding

intracellular

nucleus

cytoplasm

lysosomal membrane

Golgi apparatus

small GTPase mediated signal transduction

enzyme activator activity

zinc ion binding

membrane

protein ubiquitination

GDP binding

metal ion binding

 
228708_at 0.216 4.659 2.410 2.903e-02 0.484 -3.573 RAB27B RAB27B, member RAS oncogene family 18 50646837 BF438386 18q21.2 Hs.25318 14

nucleotide binding

GTPase activity

protein binding

GTP binding

Golgi apparatus

small GTPase mediated signal transduction

protein transport

membrane

 
229955_at 0.302 4.945 2.410 2.904e-02 0.484 -3.573 FBXO3 F-box protein 3 11 -33724866, -33719065 AW772096 11p13 Hs.406787 8

ubiquitin-protein ligase activity

proteolysis

modification-dependent protein catabolic process

 
202577_s_at -0.315 6.353 -2.409 2.909e-02 0.484 -3.575 DDX19A DEAD (Asp-Glu-Ala-As) box polypeptide 19A 16 68938324 BC005162 16q22.1 Hs.656037 5

nucleotide binding

RNA binding

helicase activity

ATP binding

nucleus

nuclear pore

cytoplasm

ATP-dependent helicase activity

protein transport

membrane

hydrolase activity

mRNA transport

intracellular protein transmembrane transport

 
221530_s_at -0.590 9.452 -2.409 2.910e-02 0.484 -3.575 BHLHE41 basic helix-loop-helix family, member e41 12 -26164227 BE857425 12p11.23-p12.1 Hs.177841 15

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

cell proliferation

organ morphogenesis

cell differentiation

Circadian rhythm - mammal

218328_at 0.221 6.725 2.409 2.911e-02 0.484 -3.575 COQ4 coenzyme Q4 homolog (S. cerevisiae) 9 130124611 NM_016035 9q34.11 Hs.98541 9

mitochondrion

ubiquinone biosynthetic process

 
230076_at 0.218 3.351 2.409 2.912e-02 0.485 -3.576 PITPNM3 PITPNM family member 3 17 -6295306 BF063164 17p13 Hs.183983 5

calcium ion binding

intracellular

transport

visual perception

lipid binding

phosphatidylinositol transporter activity

membrane

integral to membrane

phosphoinositide metabolic process

receptor tyrosine kinase binding

response to stimulus

 
225835_at -0.925 7.477 -2.408 2.915e-02 0.485 -3.577 SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporters), member 2 5 127447381 AK025062 5q23.3 Hs.162585 Hs.712970 29

transporter activity

membrane fraction

integral to plasma membrane

ion transport

potassium ion transport

sodium ion transport

sodium:potassium:chloride symporter activity

symporter activity

membrane

transepithelial chloride transport

potassium ion binding

sodium ion binding

ammonia transporter activity

transepithelial ammonium transport

Vibrio cholerae infection

206666_at 0.279 4.091 2.408 2.918e-02 0.485 -3.578 GZMK granzyme K (granzyme 3; tryptase II) 5 54355863 NM_002104 5q11-q12 Hs.277937 15

serine-type endopeptidase activity

extracellular region

proteolysis

peptidase activity

 
216981_x_at -0.590 6.108 -2.408 2.919e-02 0.485 -3.578 SPN sialophorin 16 29581800, 29582080 X60502 16p11.2 Hs.632188 44

response to protozoan

negative regulation of type IV hypersensitivity

uropod

transmembrane receptor activity

protein binding

basement membrane

extracellular space

integral to plasma membrane

chemotaxis

cellular defense response

negative regulation of cell adhesion

establishment or maintenance of cell polarity

cell surface receptor linked signal transduction

bacterial binding

induction of apoptosis by extracellular signals

external side of plasma membrane

membrane

T cell costimulation

positive regulation of T cell proliferation

negative regulation of T cell proliferation

positive regulation of tumor necrosis factor biosynthetic process

defense response to bacterium

negative thymic T cell selection

regulation of defense response to virus

regulation of immune response

Cell adhesion molecules (CAMs)

1561342_at -0.274 4.131 -2.408 2.919e-02 0.485 -3.578 LOC150005 hypothetical protein LOC150005 21   AI677840 21q21.1 Hs.606124 1    
211380_s_at -0.412 5.933 -2.407 2.920e-02 0.485 -3.578 PRKG1 protein kinase, cGMP-dependent, type I 10 52420950, 52504239 D45864 10q11.2 Hs.654556 76

nucleotide binding

neuron migration

protein serine/threonine kinase activity

cGMP-dependent protein kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

signal transduction

dendrite development

transferase activity

actin cytoskeleton organization

cGMP binding

forebrain development

Vascular smooth muscle contraction

Gap junction

Long-term depression

Olfactory transduction

204247_s_at 0.260 6.258 2.406 2.926e-02 0.486 -3.580 CDK5 cyclin-dependent kinase 5 7 -150381831 NM_004935 7q36 Hs.647078 132

nucleotide binding

neuron migration

synaptic transmission, dopaminergic

p53 binding

cyclin-dependent protein kinase activity

ErbB-2 class receptor binding

ATP binding

nucleus

cytoplasm

cytosol

protein amino acid phosphorylation

intracellular protein transport

cell-matrix adhesion

axonogenesis

skeletal muscle tissue development

motor axon guidance

cell proliferation

associative learning

visual learning

embryonic development

Schwann cell development

membrane

transferase activity

sensory perception of pain

cerebellar cortex development

cerebellar cortex formation

hippocampus development

layer formation in the cerebral cortex

central nervous system neuron development

cerebral cortex development

corpus callosum development

lamellipodium

filopodium

neuron differentiation

regulation of cell migration

axon

dendrite

growth cone

acetylcholine receptor activator activity

neuron projection development

negative regulation of protein ubiquitination

neuromuscular junction

negative regulation of synaptic plasticity

receptor catabolic process

serine phosphorylation of STAT3 protein

synaptic transmission, glutamatergic

cell soma

receptor clustering

ErbB-3 class receptor binding

positive regulation of neuron apoptosis

negative regulation of cell cycle

positive regulation of protein kinase activity

positive regulation of calcium ion-dependent exocytosis

negative regulation of protein export from nucleus

behavioral response to cocaine

dendrite morphogenesis

tau-protein kinase activity

cell division

regulation of excitatory postsynaptic membrane potential

Axon guidance

Alzheimer's disease

204219_s_at -0.234 10.248 -2.406 2.927e-02 0.486 -3.580 PSMC1 proteasome (prosome, macropain) 26S subunit, ATPase, 1 14 89792646 NM_002802 14q32.11 Hs.356654 51

nucleotide binding

proteasome complex

protein binding

ATP binding

nucleus

nucleolus

cytoplasm

cytosol

hydrolase activity

ATPase activity

protein catabolic process

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

236109_at 0.398 5.899 2.406 2.930e-02 0.486 -3.581 RPUSD4 RNA pseudouridylate synthase domain containing 4 11 -125577199 BE674055 11q24.2 Hs.150458 5

pseudouridine synthesis

RNA binding

pseudouridine synthase activity

 
234098_at 0.278 5.202 2.405 2.932e-02 0.486 -3.582 SOBP sine oculis binding protein homolog (Drosophila) 6 107918009 AK021973 6q21 Hs.445244 4

zinc ion binding

metal ion binding

 
209015_s_at -0.299 10.020 -2.405 2.936e-02 0.486 -3.583 DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 7 156822470, 156822471 BC002446 7q36.3 Hs.593923 Hs.719116 25

ATPase activator activity

DNA binding

nucleus

cytoplasm

protein folding

response to unfolded protein

transcription repressor activity

heat shock protein binding

negative regulation of caspase activity

intermediate filament organization

negative regulation of transcription, DNA-dependent

perinuclear region of cytoplasm

chaperone binding

 
1569374_at 0.260 3.751 2.405 2.936e-02 0.486 -3.583 C3orf62 chromosome 3 open reading frame 62 3 -49281033 BC032616 3p21.31 Hs.403828 3    
225206_s_at -0.213 7.299 -2.404 2.937e-02 0.486 -3.583 MTRF1L mitochondrial translational release factor 1-like 6 -153350092 AI479199 6q25-q26 Hs.225836 Hs.304818 9

cytoplasm

mitochondrion

translational termination

translation release factor activity, codon specific

 
225346_at 0.369 6.759 2.404 2.937e-02 0.486 -3.583 MTERFD3 MTERF domain containing 3 12 -105895198 NM_025198 12q24.1 Hs.5009 6

mitochondrion

transcription termination

regulation of transcription

 
217465_at -0.344 3.667 -2.404 2.939e-02 0.486 -3.584 NCKAP1 NCK-associated protein 1 2 -183497849 AK001291 2q32 Hs.603732 20

protein binding

plasma membrane

apoptosis

central nervous system development

integral to membrane

cell projection

Regulation of actin cytoskeleton

201388_at -0.252 7.184 -2.404 2.939e-02 0.486 -3.584 PSMD3 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 17 35390585 NM_002809 17q21.1 Hs.12970 34

proteasome complex

protein binding

cytosol

enzyme regulator activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

regulation of protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

218736_s_at -0.383 8.679 -2.404 2.942e-02 0.486 -3.585 PALMD palmdelphin 1 99884018 NM_017734 1p22-p21 Hs.483993 7

cytoplasm

regulation of cell shape

membrane

 
227325_at -0.244 6.610 -2.403 2.943e-02 0.486 -3.585 LOC255783 hypothetical protein LOC255783 19 52469981 AW172584 19q13.32 Hs.128690 1    
211276_at 0.226 3.057 2.403 2.945e-02 0.486 -3.586 TCEAL2 transcription elongation factor A (SII)-like 2 X 101267315 AF063606 Xq22.1-q22.3 Hs.401835 6

nucleus

regulation of transcription

 
209384_at 0.187 8.240 2.403 2.946e-02 0.486 -3.586 PROSC proline synthetase co-transcribed homolog (bacterial) 8 37739258 AA176833 8p11.2 Hs.304792 Hs.608177 8

intracellular

cytoplasm

 
232964_at -0.278 6.153 -2.403 2.947e-02 0.486 -3.586 SPDYE1 speedy homolog E1 (Xenopus laevis) 7 44007013 AL137266 7p13 Hs.645483 2    
221295_at 0.207 4.973 2.401 2.954e-02 0.487 -3.588 CIDEA cell death-inducing DFFA-like effector a 18 12244317, 12244627 NM_001279 18 18p11.21 Hs.249129 15

temperature homeostasis

protein binding

intracellular

nucleus

cytoplasm

mitochondrion

mitochondrial envelope

lipid particle

DNA fragmentation involved in apoptosis

lipid metabolic process

cell death

DNA damage response, signal transduction resulting in induction of apoptosis

positive regulation of sequestering of triglyceride

lipid storage

negative regulation of transforming growth factor beta receptor signaling pathway

negative regulation of tumor necrosis factor production

protein homodimerization activity

negative regulation of apoptosis

negative regulation of cytokine secretion

negative regulation of lipid catabolic process

 
243617_at 0.257 6.123 2.401 2.955e-02 0.487 -3.589 ZNF827 zinc finger protein 827 4 -146901337 BF678830 4q31.21-q31.22 Hs.133916 Hs.633543 7

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
45526_g_at -0.375 8.498 -2.401 2.955e-02 0.487 -3.589 NAT15 N-acetyltransferase 15 (GCN5-related, putative) 16 3433668, 3447992 AI246641 16p13.3 Hs.513296 6

N-acetyltransferase activity

metabolic process

acyltransferase activity

transferase activity

 
1558675_s_at -0.330 6.888 -2.401 2.958e-02 0.487 -3.589 SDCCAG1 serologically defined colon cancer antigen 1 14 -49320281 AV724508 14q22 Hs.655964 8

nucleus

cytoplasm

 
235809_at -0.275 3.853 -2.401 2.958e-02 0.487 -3.589 LIN54 lin-54 homolog (C. elegans) 4 -84064780, -84064780 BF678497 4q21.22 Hs.96952 2

nucleus

chromosome

regulation of transcription

 
223315_at 0.553 5.790 2.401 2.959e-02 0.487 -3.590 NTN4 netrin 4 12 -94575713 AF278532 12q22 12q22-q23 Hs.201034 9

protein binding

extracellular region

basement membrane

neuron remodeling

Axon guidance

214057_at -0.413 4.910 -2.401 2.959e-02 0.487 -3.590 MCL1 myeloid cell leukemia sequence 1 (BCL2-related) 1 -148813658 H71805 1q21 Hs.719112 154

cell fate determination

protein binding

nucleus

nucleoplasm

cytoplasm

mitochondrion

mitochondrial outer membrane

anti-apoptosis

multicellular organismal development

protein channel activity

membrane

integral to membrane

cellular homeostasis

cell differentiation

response to cytokine stimulus

regulation of apoptosis

protein heterodimerization activity

 
226360_at 0.424 5.470 2.400 2.960e-02 0.487 -3.590 ZNRF3 zinc and ring finger 3 22 27609889 AK022809 22q12.1 Hs.655242 8

protein binding

zinc ion binding

membrane

integral to membrane

metal ion binding

 
218541_s_at -0.684 7.090 -2.400 2.962e-02 0.487 -3.591 C8orf4 chromosome 8 open reading frame 4 8 40130145 NM_020130 8p11.2 Hs.591849 13

apoptosis

 
1559576_at 0.246 4.110 2.400 2.963e-02 0.487 -3.591 WDR78 WD repeat domain 78 1 -67075873, -67051159 BI088045 1p31.3 Hs.49421 4    
242663_at 0.232 4.550 2.399 2.970e-02 0.487 -3.593 LOC148189 hypothetical LOC148189 19 -32973241 AA115127 19q11 Hs.565253 2    
225866_at -0.285 8.184 -2.398 2.972e-02 0.487 -3.593 BXDC1 brix domain containing 1 6 111409983 AA976536 6q21 Hs.372265 8

protein binding

nucleus

nucleolus

 
226778_at -0.200 4.347 -2.398 2.972e-02 0.487 -3.593 C8orf42 chromosome 8 open reading frame 42 8 -431645 AI632224 8p23.3 Hs.289293 1    
240140_s_at -0.213 4.271 -2.398 2.974e-02 0.487 -3.594 LRIG1 leucine-rich repeats and immunoglobulin-like domains 1 3 -66511910 AW293282 3p14 Hs.518055 18

protein binding

membrane

integral to membrane

 
217852_s_at -0.423 8.728 -2.398 2.975e-02 0.487 -3.594 ARL8B ADP-ribosylation factor-like 8B 3 5138929 NM_018184 3p26.1 Hs.250009 Hs.719100 10

nucleotide binding

GTPase activity

GTP binding

intracellular

cytoplasm

lysosomal membrane

endosome

chromosome segregation

small GTPase mediated signal transduction

membrane

GDP binding

midbody

late endosome membrane

alpha-tubulin binding

beta-tubulin binding

spindle midzone

 
1555326_a_at -0.448 4.830 -2.398 2.976e-02 0.487 -3.595 ADAM9 ADAM metallopeptidase domain 9 (meltrin gamma) 8 38973661, 38973661 AF495383 8p11.22 Hs.591852 36

activation of MAPKK activity

metalloendopeptidase activity

protein kinase C binding

integrin binding

integrin binding

integrin binding

collagen binding

extracellular region

extracellular space

cytoplasm

plasma membrane

proteolysis

response to oxidative stress

cell-matrix adhesion

transforming growth factor beta receptor signaling pathway

integrin-mediated signaling pathway

peptidase activity

zinc ion binding

cell surface

response to manganese ion

integral to membrane

SH3 domain binding

SH3 domain binding

keratinocyte differentiation

intrinsic to external side of plasma membrane

positive regulation of cell adhesion mediated by integrin

cell-cell adhesion mediated by integrin

positive regulation of macrophage fusion

response to tumor necrosis factor

monocyte activation

response to hydrogen peroxide

laminin binding

metal ion binding

positive regulation of protein secretion

positive regulation of membrane protein ectodomain proteolysis

PMA-inducible membrane protein ectodomain proteolysis

response to glucocorticoid stimulus

positive regulation of keratinocyte migration

response to calcium ion

 
202081_at -0.534 7.070 -2.398 2.976e-02 0.487 -3.595 IER2 immediate early response 2 19 13122281 NM_004907 19p13.2 Hs.501629 3

cytoplasm

 
1559369_at -0.340 3.168 -2.398 2.976e-02 0.487 -3.595 C5orf44 chromosome 5 open reading frame 44 5 64956313, 64956313 BI668018 5q12.3 Hs.591760 5    
225262_at -0.376 6.462 -2.398 2.977e-02 0.487 -3.595 FOSL2 FOS-like antigen 2 2 28469282 AI670862 2p23.3 Hs.220971 Hs.596972 20

transcription factor activity

nucleus

nucleolus

regulation of transcription from RNA polymerase II promoter

cell death

sequence-specific DNA binding

protein dimerization activity

positive regulation of fibroblast proliferation

 
209160_at 1.366 8.487 2.397 2.977e-02 0.487 -3.595 AKR1C3 aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II) 10 5126567 AB018580 10p15-p14 Hs.78183 68

aldo-keto reductase activity

intracellular

cytoplasm

prostaglandin metabolic process

oxidoreductase activity

prostaglandin-F synthase activity

3-alpha-hydroxysteroid dehydrogenase (A-specific) activity

testosterone 17-beta-dehydrogenase (NADP+) activity

trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity

indanol dehydrogenase activity

testosterone 17-beta-dehydrogenase activity

oxidation reduction

Arachidonic acid metabolism

Metabolism of xenobiotics by cytochrome P450

203226_s_at -0.271 7.757 -2.397 2.977e-02 0.487 -3.595 TSPAN31 tetraspanin 31 12 56425050 AL514076 12q13.3 Hs.632708 12

membrane fraction

integral to plasma membrane

positive regulation of cell proliferation

membrane

 
209154_at 0.554 8.433 2.397 2.980e-02 0.487 -3.596 TAX1BP3 Tax1 (human T-cell leukemia virus type I) binding protein 3 17 -3512937 AF234997 17p13 Hs.12956 14

nucleus

cytoplasm

Rho protein signal transduction

beta-catenin binding

negative regulation of cell proliferation

negative regulation of Wnt receptor signaling pathway

transcription regulator activity

 
223124_s_at -0.312 8.444 -2.397 2.982e-02 0.488 -3.596 C1orf128 chromosome 1 open reading frame 128 1 23977462 AF271784 1p36.11 Hs.31819 4    
218175_at 0.259 8.233 2.396 2.985e-02 0.488 -3.597 CCDC92 coiled-coil domain containing 92 12 -122986907 NM_025140 12q24.31 Hs.114111 5    
206174_s_at -0.349 7.891 -2.396 2.986e-02 0.488 -3.597 PPP6C protein phosphatase 6, catalytic subunit 9 -126948672 NM_002721 9q33.3 Hs.715605 16

G1/S transition of mitotic cell cycle

protein serine/threonine phosphatase activity

iron ion binding

protein binding

cytoplasm

cytosol

protein amino acid dephosphorylation

cell cycle

hydrolase activity

manganese ion binding

metal ion binding

 
209027_s_at -0.359 5.959 -2.395 2.990e-02 0.488 -3.599 ABI1 abl-interactor 1 10 -27075530 BF673013 10p11.2 Hs.508148 39

intracellular

soluble fraction

nucleus

cytoplasm

endoplasmic reticulum

cytosol

cytoskeleton

transmembrane receptor protein tyrosine kinase signaling pathway

cytoskeletal protein binding

negative regulation of cell proliferation

peptidyl-tyrosine phosphorylation

synaptosome

lamellipodium

cell junction

filopodium

growth cone

synapse

 
217315_s_at -0.221 5.222 -2.395 2.992e-02 0.488 -3.599 KLK13 kallikrein-related peptidase 13 19 -56251274 AL050220 19q13.3-q13.4 Hs.165296 18

serine-type endopeptidase activity

protein binding

extracellular region

cytoplasm

proteolysis

peptidase activity

 
235259_at -0.239 3.065 -2.395 2.992e-02 0.488 -3.599 PACRGL PARK2 co-regulated-like 4 20311133 AA398590 4p15.31 Hs.479298 5

binding

 
203389_at 0.204 5.823 2.395 2.993e-02 0.488 -3.600 KIF3C kinesin family member 3C 2 -26002958 AF035621 2p23 Hs.21611 9

nucleotide binding

microtubule motor activity

ATP binding

kinesin complex

microtubule

microtubule-based movement

 
212530_at -0.329 9.438 -2.395 2.994e-02 0.488 -3.600 NEK7 NIMA (never in mitosis gene a)-related kinase 7 1 196392730 AL080111 1q31.3 Hs.24119 7

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

transferase activity

 
202512_s_at -0.358 6.611 -2.395 2.994e-02 0.488 -3.600 ATG5 ATG5 autophagy related 5 homolog (S. cerevisiae) 6 -106739044 NM_004849 6q21 Hs.486063 30

autophagic vacuole formation

protein binding

cytoplasm

autophagic vacuole

autophagy

apoptosis

pre-autophagosomal structure membrane

post-translational protein modification

Regulation of autophagy

RIG-I-like receptor signaling pathway

200978_at 0.248 12.281 2.394 2.995e-02 0.488 -3.600 MDH1 malate dehydrogenase 1, NAD (soluble) 2 63669625 NM_005917 2p13.3 Hs.526521 18

malic enzyme activity

binding

soluble fraction

cytoplasm

cytosol

cytosol

glycolysis

tricarboxylic acid cycle

oxaloacetate metabolic process

malate metabolic process

oxidoreductase activity

NAD metabolic process

L-malate dehydrogenase activity

L-malate dehydrogenase activity

cellular carbohydrate metabolic process

NAD or NADH binding

oxidation reduction

Citrate cycle (TCA cycle)

Pyruvate metabolism

Glyoxylate and dicarboxylate metabolism

Carbon fixation in photosynthetic organisms

Reductive carboxylate cycle (CO2 fixation)

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

202593_s_at -0.659 7.613 -2.394 2.996e-02 0.488 -3.601 GDE1 glycerophosphodiester phosphodiesterase 1 16 -19420515 NM_016641 16p12-p11.2 Hs.512607 8

magnesium ion binding

cytoplasm

glycerol metabolic process

lipid metabolic process

glycerophosphodiester phosphodiesterase activity

membrane

integral to membrane

hydrolase activity

glycerophosphoinositol glycerophosphodiesterase activity

Glycerophospholipid metabolism

218653_at 0.410 6.541 2.394 2.997e-02 0.488 -3.601 SLC25A15 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 13 40261546 NM_014252 13q14 Hs.646645 Hs.655240 17

urea cycle

L-ornithine transmembrane transporter activity

mitochondrial ornithine transport

transporter activity

binding

mitochondrion

mitochondrial inner membrane

cellular amino acid metabolic process

transport

membrane

integral to membrane

 
210825_s_at 0.266 10.757 2.394 2.997e-02 0.488 -3.601 PEBP1 phosphatidylethanolamine binding protein 1 12 117058252 AF130103 12q24.23 Hs.433863 Hs.718605 55

nucleotide binding

serine-type endopeptidase inhibitor activity

protein binding

ATP binding

cytoplasm

lipid binding

phosphatidylethanolamine binding

peptidase inhibitor activity

 
213034_at 0.267 7.272 2.394 2.998e-02 0.488 -3.601 QSK serine/threonine-protein kinase QSK 11 -116219327 AB023216 11q23.3 Hs.167451 14

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

transferase activity

 
1555197_a_at -0.193 4.342 -2.394 2.998e-02 0.488 -3.601 C21orf58 chromosome 21 open reading frame 58 21 -46545474 AY039243 21q22.3 Hs.236572 5    
205345_at -0.512 5.725 -2.394 3.000e-02 0.488 -3.602 BARD1 BRCA1 associated RING domain 1 2 -215301519 NM_000465 2q34-q35 Hs.591642 100

ubiquitin ligase complex

tissue homeostasis

RNA binding

ubiquitin-protein ligase activity

protein binding

intracellular

nucleus

nucleus

cytoplasm

DNA repair

response to DNA damage stimulus

cell cycle arrest

zinc ion binding

protein ubiquitination

ligase activity

kinase binding

modification-dependent protein catabolic process

BRCA1-BARD1 complex

negative regulation of mRNA 3'-end processing

regulation of phosphorylation

protein homodimerization activity

positive regulation of apoptosis

negative regulation of apoptosis

positive regulation of protein catabolic process

negative regulation of protein export from nucleus

metal ion binding

protein heterodimerization activity

BRCA1-A complex

 
231860_at -0.294 5.417 -2.393 3.002e-02 0.488 -3.602 BRWD1 bromodomain and WD repeat domain containing 1 21 -39590234, -39484017, -39479273 AW268572 21q22.2 Hs.654740 8

protein binding

nucleus

cytoplasm

regulation of transcription from RNA polymerase II promoter

biological_process

transcription regulator activity

regulation of transcription

 
201005_at 0.563 8.565 2.393 3.005e-02 0.488 -3.603 CD9 CD9 molecule 12 6179815 NM_001769 12p13.3 Hs.114286 96

protein binding

plasma membrane

plasma membrane

integral to plasma membrane

cell motion

cell adhesion

fusion of sperm to egg plasma membrane

platelet activation

paranodal junction assembly

platelet alpha granule membrane

Hematopoietic cell lineage

218998_at -0.295 7.265 -2.393 3.005e-02 0.488 -3.603 C9orf6 chromosome 9 open reading frame 6 9 110736493 NM_017832 9q31.3 Hs.29276 2    
203374_s_at -0.305 7.165 -2.392 3.007e-02 0.488 -3.604 TPP2 tripeptidyl peptidase II 13 102047286 AW612376 13q32-q33 Hs.432424 23

aminopeptidase activity

serine-type endopeptidase activity

cytoplasm

proteolysis

peptidase activity

tripeptidyl-peptidase activity

 
201539_s_at -0.746 11.817 -2.392 3.008e-02 0.488 -3.604 FHL1 four and a half LIM domains 1 X 135056526, 135057224, 135058402, 135079120, 135079731, 135106578, 135106720 U29538 Xq26 Hs.435369 38

molecular_function

cellular_component

nucleus

cytoplasm

cytosol

multicellular organismal development

muscle organ development

zinc ion binding

organ morphogenesis

cell growth

cell differentiation

metal ion binding

 
1554770_x_at 0.309 2.991 2.392 3.008e-02 0.488 -3.604 ZNF785 zinc finger protein 785 16 -30499494 BC040642 16p11.2 Hs.513509 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
235030_at -0.349 6.982 -2.392 3.010e-02 0.488 -3.605 FAM55C family with sequence similarity 55, member C 3 102980718, 102980975 BF969254 3q12.3 Hs.595933 4

extracellular region

 
213391_at 0.338 6.242 2.392 3.011e-02 0.488 -3.605 DPY19L4 dpy-19-like 4 (C. elegans) 8 95801278 AI669947 8q22.1 Hs.567828 6

membrane

integral to membrane

 
202234_s_at -0.451 7.965 -2.391 3.012e-02 0.488 -3.605 SLC16A1 solute carrier family 16, member 1 (monocarboxylic acid transporter 1) 1 -113255992 BF511091 1p12 Hs.75231 43

protein binding

membrane fraction

plasma membrane

transport

mevalonate transmembrane transporter activity

symporter activity

secondary active monocarboxylate transmembrane transporter activity

organic anion transport

mevalonate transport

integral to membrane

 
222071_s_at -0.189 2.426 -2.391 3.013e-02 0.488 -3.605 SLCO4C1 solute carrier organic anion transporter family, member 4C1 5 -101597590 BE552428 5q21.2 Hs.127648 2

transporter activity

plasma membrane

ion transport

multicellular organismal development

spermatogenesis

integral to membrane

cell differentiation

 
203315_at -0.251 8.167 -2.391 3.014e-02 0.488 -3.606 NCK2 NCK adaptor protein 2 2 105727785, 105834736 BC000103 2q12 Hs.529244 Hs.707062 34

protein binding

cytoplasm

endoplasmic reticulum

regulation of translation

actin filament organization

signal transduction

signal complex assembly

epidermal growth factor receptor signaling pathway

regulation of epidermal growth factor receptor activity

cytoskeletal adaptor activity

negative regulation of cell proliferation

vesicle membrane

cell migration

lamellipodium assembly

receptor signaling complex scaffold activity

positive regulation of actin filament polymerization

positive regulation of T cell proliferation

T cell activation

ErbB signaling pathway

Axon guidance

T cell receptor signaling pathway

Pathogenic Escherichia coli infection - EHEC

204811_s_at 0.270 6.104 2.391 3.016e-02 0.488 -3.606 CACNA2D2 calcium channel, voltage-dependent, alpha 2/delta subunit 2 3 -50375234 NM_006030 3p21.3 Hs.476273 Hs.674666 9

voltage-gated ion channel activity

calcium channel activity

calcium ion binding

ion transport

calcium ion transport

membrane

integral to membrane

MAPK signaling pathway

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

217292_at -0.182 2.190 -2.391 3.017e-02 0.488 -3.606 MTMR7 myotubularin related protein 7 8 -17198676 AL117549 8p22 Hs.625674 6

inositol or phosphatidylinositol phosphatase activity

protein tyrosine phosphatase activity

protein binding

membrane fraction

cytoplasm

cytosol

protein amino acid dephosphorylation

hydrolase activity

 
230367_at -1.313 9.957 -2.390 3.022e-02 0.489 -3.608 SMTNL1 smoothelin-like 1 11 57065554 AI359511 11q12.1 Hs.68756 2

response to activity

peptidyl-serine phosphorylation

M band

I band

response to drug

contractile fiber

positive regulation of vasoconstriction

negative regulation of vasodilation

muscle organ morphogenesis

 
205130_at 0.236 4.763 2.389 3.025e-02 0.489 -3.609 RAGE renal tumor antigen 14 -101764930 NM_014226 14q32 Hs.104119 67

nucleotide binding

cyclin-dependent protein kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

signal transduction

transferase activity

 
203192_at -0.321 6.466 -2.389 3.026e-02 0.489 -3.609 ABCB6 ATP-binding cassette, sub-family B (MDR/TAP), member 6 2 -219782737 NM_005689 2q36 Hs.107911 15

nucleotide binding

ATP binding

mitochondrion

mitochondrial envelope

mitochondrial outer membrane

transport

cellular iron ion homeostasis

membrane

integral to membrane

ATPase activity

ATPase activity, coupled to transmembrane movement of substances

ATP-binding cassette (ABC) transporter complex

ABC transporters

225840_at -0.415 7.277 -2.389 3.026e-02 0.489 -3.609 TEF thyrotrophic embryonic factor 22 40093337, 40107908 AA779795 22q13 22q13.2 Hs.181159 14

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

sequence-specific DNA binding

protein dimerization activity

rhythmic process

 
224991_at 0.273 4.888 2.389 3.028e-02 0.489 -3.610 CMIP c-Maf-inducing protein 16 80036275, 80086454 AI819630 16q23 Hs.709248 7

nucleus

cytoplasm

 
200767_s_at -0.212 7.277 -2.388 3.031e-02 0.489 -3.611 FAM120A family with sequence similarity 120A 9 95253993 NM_014612 9q22.31 Hs.372003 Hs.707324 14

RNA binding

cytoplasm

plasma membrane

 
215984_s_at -0.252 6.251 -2.388 3.034e-02 0.489 -3.611 ARFRP1 ADP-ribosylation factor related protein 1 20 -61800439 AL121845 20q13.3 Hs.389277 12

nucleotide binding

GTPase activity

GTP binding

intracellular

membrane fraction

Golgi apparatus

signal transduction

small GTPase mediated signal transduction

gastrulation

 
1569894_at 0.336 4.641 2.388 3.035e-02 0.489 -3.612 PPP2R3C protein phosphatase 2 (formerly 2A), regulatory subunit B'', gamma 14 -34624428 BC037797 14q13.2 Hs.530712 Hs.621667 8

calcium ion binding

protein binding

nucleus

cytoplasm

 
232147_at 0.181 6.059 2.387 3.037e-02 0.489 -3.612 BTBD12 BTB (POZ) domain containing 12 16 -3571183 AL442083 16p13.3 Hs.143681 8

protein binding

 
226595_at 0.203 6.249 2.387 3.039e-02 0.490 -3.613 SNX21 sorting nexin family member 21 20 43895876 AI935964 20q13.12 Hs.472854 8

protein binding

cell communication

protein transport

phosphoinositide binding

 
242338_at -0.264 4.707 -2.386 3.042e-02 0.490 -3.614 TMEM64 transmembrane protein 64 8 -91703398 BG535396 8q21.3 Hs.567759 2

membrane

integral to membrane

 
45714_at -0.754 9.104 -2.386 3.043e-02 0.490 -3.614 HCFC1R1 host cell factor C1 regulator 1 (XPO1 dependent) 16 -3012626 AA436930 16p13.3 Hs.719259 2

nucleus

cytoplasm

 
239730_at -0.241 5.238 -2.386 3.046e-02 0.490 -3.615 DGCR14 DiGeorge syndrome critical region gene 14 22 -17497791 AA662761 22q11.2 22q11.21 Hs.517407 Hs.716675 17

molecular_function

nucleus

spliceosomal complex

nucleolus

cytoplasm

mRNA processing

nervous system development

RNA splicing

 
229752_at 0.349 6.321 2.386 3.046e-02 0.490 -3.615 IKZF4 IKAROS family zinc finger 4 (Eos) 12 54700955 BF115531 12q13 Hs.553221 9

transcription factor activity

intracellular

nucleus

zinc ion binding

transcription repressor activity

regulation of transcription

metal ion binding

 
201189_s_at 0.208 6.302 2.386 3.046e-02 0.490 -3.615 ITPR3 inositol 1,4,5-triphosphate receptor, type 3 6 33697138 NM_002224 6p21 Hs.65758 40

inositol hexakisphosphate binding

ion channel activity

inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity

calcium channel activity

calcium ion binding

protein binding

nucleus

nuclear outer membrane

nucleoplasm

nucleolus

cytoplasm

endoplasmic reticulum

microsome

integral to plasma membrane

brush border

ion transport

calcium ion transport

G-protein coupled receptor protein signaling pathway

elevation of cytosolic calcium ion concentration

membrane

phosphoinositide binding

cell soma

myelin sheath

inositol 1,3,4,5 tetrakisphosphate binding

apical part of cell

sensory perception of bitter taste

sensory perception of sweet taste

sensory perception of umami taste

protein homooligomerization

protein heterooligomerization

response to calcium ion

inositol 1,4,5 trisphosphate binding

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Gap junction

Long-term potentiation

Long-term depression

Taste transduction

GnRH signaling pathway

Alzheimer's disease

210886_x_at 0.288 6.997 2.386 3.046e-02 0.490 -3.615 TP53TG1 TP53 target 1 (non-protein coding) 7 -86792599 AB007457 7q21.1 Hs.274329 3

signal transducer activity

response to stress

 
202222_s_at -0.249 11.468 -2.385 3.049e-02 0.490 -3.616 DES desmin 2 219991342 NM_001927 2q35 Hs.594952 57

structural constituent of cytoskeleton

protein binding

intracellular

insoluble fraction

cytoplasm

cytoskeleton

muscle contraction

cytoskeleton organization

regulation of heart contraction

Z disc

sarcolemma

contractile fiber

type III intermediate filament

synapse

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

230739_at -0.328 8.015 -2.385 3.049e-02 0.490 -3.616 C18orf19 chromosome 18 open reading frame 19 18 -13653345 AI192379 18p11.21 Hs.13034 3

membrane

integral to membrane

 
222936_s_at -0.222 2.867 -2.385 3.052e-02 0.490 -3.617 PPPDE1 PPPDE peptidase domain containing 1 1 242882974 AF151904 1q44 Hs.498317 5    
229247_at 0.232 4.873 2.385 3.053e-02 0.490 -3.617 FBLN7 fibulin 7 2 112612432 BE677799 2q13 Hs.437696 5

calcium ion binding

protein binding

extracellular region

proteinaceous extracellular matrix

cell adhesion

heparin binding

 
200059_s_at -0.299 10.457 -2.385 3.053e-02 0.490 -3.617 RHOA ras homolog gene family, member A 3 -49371582 BC001360 3p21.3 Hs.247077 Hs.709788 348

nucleotide binding

magnesium ion binding

cell morphogenesis

GTPase activity

protein binding

GTP binding

intracellular

nucleus

cytoplasm

cytoskeleton

plasma membrane

regulation of transcription from RNA polymerase II promoter

cell adhesion

cell-matrix adhesion

small GTPase mediated signal transduction

Rho protein signal transduction

skeletal muscle tissue development

myosin binding

actin cytoskeleton organization

cell differentiation

positive regulation of NF-kappaB import into nucleus

positive regulation of I-kappaB kinase/NF-kappaB cascade

negative regulation of neuron apoptosis

interspecies interaction between organisms

negative regulation of neuron differentiation

positive regulation of neuron differentiation

positive regulation of stress fiber formation

Chemokine signaling pathway

Vascular smooth muscle contraction

Wnt signaling pathway

TGF-beta signaling pathway

Axon guidance

Focal adhesion

Adherens junction

Tight junction

T cell receptor signaling pathway

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Pathogenic Escherichia coli infection - EHEC

Pathways in cancer

220266_s_at -0.338 5.360 -2.384 3.054e-02 0.490 -3.617 KLF4 Kruppel-like factor 4 (gut) 9 -109286953 NM_004235 9q31 Hs.376206 66

transcription factor activity

intracellular

nucleus

nucleolus

mesodermal cell fate determination

zinc ion binding

negative regulation of cell proliferation

transcription activator activity

transcription repressor activity

regulation of transcription

negative regulation of transcription, DNA-dependent

metal ion binding

 
212095_s_at -0.331 7.019 -2.384 3.056e-02 0.490 -3.618 MTUS1 mitochondrial tumor suppressor 1 8 -17545583, -17545583, -17545583 BE552421 8p22 Hs.7946 11

nucleus

mitochondrion

Golgi apparatus

plasma membrane

 
219199_at -0.338 3.674 -2.384 3.058e-02 0.490 -3.618 AFF4 AF4/FMR2 family, member 4 5 -132238969 NM_014423 5q31 Hs.519313 Hs.664840 10

transcription factor activity

nucleus

transcription from RNA polymerase II promoter

regulation of transcription

 
222688_at 0.385 4.216 2.384 3.058e-02 0.490 -3.618 ACER3 alkaline ceramidase 3 11 76249564 R12678 11q13.5 Hs.23862 5

Golgi membrane

endoplasmic reticulum

endoplasmic reticulum membrane

Golgi apparatus

ceramide metabolic process

membrane

integral to membrane

hydrolase activity

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides

Sphingolipid metabolism

210305_at -0.738 11.233 -2.384 3.059e-02 0.490 -3.619 PDE4DIP phosphodiesterase 4D interacting protein 1 -143663117, -143663117, -143601947, -143601947, -143562783 AB042557 1q12 Hs.584841 Hs.613082 Hs.657186 Hs.657490 Hs.719077 10

nucleus

cytoplasm

Golgi apparatus

centrosome

 
1565681_s_at -0.391 6.440 -2.384 3.059e-02 0.490 -3.619 DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 10 -310131 N42910 10p15.3 Hs.432397 7

catalytic activity

nucleus

transcription factor binding

metabolic process

 
204508_s_at -0.219 3.892 -2.383 3.060e-02 0.490 -3.619 CA12 carbonic anhydrase XII 15 -61402782 BC001012 15q22 Hs.210995 27

carbonate dehydratase activity

cytoplasm

plasma membrane

one-carbon metabolic process

zinc ion binding

integral to membrane

lyase activity

metal ion binding

Nitrogen metabolism

223581_at 0.235 5.041 2.383 3.061e-02 0.490 -3.619 ZNF577 zinc finger protein 577 19 -57066361, -57066361, -57050868 BC004992 19q13.41 Hs.148322 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
218601_at 0.187 8.240 2.383 3.062e-02 0.490 -3.619 URG4 up-regulated gene 4 7 -43882025, -43882025 NM_017920 7p13 Hs.709317 9    
1565716_at 0.332 5.339 2.382 3.069e-02 0.491 -3.622 FUS fusion (involved in t(12;16) in malignant liposarcoma) 16 31098953 BE930017 16p11.2 Hs.513522 55

nuclear mRNA splicing, via spliceosome

DNA binding

RNA binding

protein binding

intracellular

nucleus

nucleolus

cell death

zinc ion binding

metal ion binding

 
212926_at -0.395 4.594 -2.382 3.070e-02 0.491 -3.622 SMC5 structural maintenance of chromosomes 5 9 72063697 AW183677 9q21.12 Hs.534189 Hs.601181 13

nucleotide binding

ATP binding

nucleus

chromosome

DNA repair

DNA recombination

response to DNA damage stimulus

 
202472_at 0.271 6.465 2.382 3.070e-02 0.491 -3.622 MPI mannose phosphate isomerase 15 72969462 NM_002435 15q22-qter Hs.75694 18

mannose-6-phosphate isomerase activity

cytoplasm

carbohydrate metabolic process

zinc ion binding

isomerase activity

metal ion binding

Fructose and mannose metabolism

Amino sugar and nucleotide sugar metabolism

Metabolic pathways

237475_x_at 0.211 8.236 2.382 3.070e-02 0.491 -3.622 CCDC152 coiled-coil domain containing 152 5 42792676 AI151104 5p12 Hs.718521 1    
230700_at -0.277 5.276 -2.381 3.073e-02 0.491 -3.623 RTN4RL1 reticulon 4 receptor-like 1 17 -1784720 H06251 17p13.3 Hs.22917 5

receptor activity

protein binding

plasma membrane

axon regeneration

anchored to plasma membrane

 
225521_at -0.373 5.871 -2.381 3.075e-02 0.491 -3.623 ANAPC7 anaphase promoting complex subunit 7 12 -109297656, -109295087 AL137586 12q24.11 Hs.524741 30

binding

nucleoplasm

cytosol

cell cycle

mitosis

modification-dependent protein catabolic process

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

cell division

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

1568834_s_at 0.268 5.705 2.381 3.075e-02 0.491 -3.623 CCDC90B coiled-coil domain containing 90B 11 -82650149 BC017771 11q14.1 Hs.368866 7

mitochondrion

membrane

integral to membrane

 
1564207_at -0.356 7.969 -2.381 3.076e-02 0.491 -3.623 FLJ35390 hypothetical LOC255031 7 44045222, 44045591 BC014556 7p13 Hs.633978 Hs.661253 3    
202482_x_at -0.215 5.175 -2.380 3.079e-02 0.491 -3.624 RANBP1 RAN binding protein 1 22 18485023 AI862473 22q11.21 Hs.24763 24

GDP-dissociation inhibitor activity

GTPase activator activity

protein binding

nucleus

cytoplasm

centrosome

spindle organization

signal transduction

Ran GTPase binding

positive regulation of mitotic centrosome separation

intracellular transport

 
238864_at 0.224 5.488 2.380 3.080e-02 0.491 -3.624 VWA3A von Willebrand factor A domain containing 3A 16 22011363 AI559649 16p12.2 Hs.10697 4

extracellular region

 
223053_x_at -0.235 8.527 -2.380 3.081e-02 0.491 -3.625 SSU72 SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) 1 -1466915 AF277178 1p36.33 Hs.30026 Hs.657061 7

phosphoprotein phosphatase activity

nucleus

cytoplasm

mRNA processing

hydrolase activity

 
1566271_x_at -0.185 3.442 -2.380 3.083e-02 0.491 -3.625 GARNL1 GTPase activating Rap/RanGAP domain-like 1 14 -35077308 AF085938 14q13.2 Hs.113150 10

GTPase activator activity

intracellular

nucleus

cytoplasm

mitochondrion

regulation of small GTPase mediated signal transduction

 
208803_s_at -0.398 5.248 -2.379 3.086e-02 0.491 -3.626 SRP72 signal recognition particle 72kDa 4 57028518 AF069765 4q11 Hs.237825 18

signal recognition particle binding

binding

cytoplasm

signal recognition particle, endoplasmic reticulum targeting

SRP-dependent cotranslational protein targeting to membrane

7S RNA binding

response to drug

Protein export

1555758_a_at 0.371 4.726 2.378 3.090e-02 0.492 -3.627 CDKN3 cyclin-dependent kinase inhibitor 3 14 53933422 AF213040 14q22 Hs.84113 17

regulation of cyclin-dependent protein kinase activity

G1/S transition of mitotic cell cycle

protein serine/threonine phosphatase activity

protein tyrosine phosphatase activity

protein binding

cytoplasm

cell cycle

cell cycle arrest

protein tyrosine/serine/threonine phosphatase activity

negative regulation of cell proliferation

dephosphorylation

hydrolase activity

perinuclear region of cytoplasm

 
1560163_at 0.230 4.092 2.378 3.091e-02 0.492 -3.628 LOC100129510 hypothetical protein LOC100129510 17   AK097908 17q25.3 Hs.656230 1    
226573_at 0.571 5.920 2.377 3.097e-02 0.492 -3.629 DIRAS1 DIRAS family, GTP-binding RAS-like 1 19 -2665564 AI829795 19p13.3 Hs.172753 6

nucleotide binding

GTP binding

intracellular

plasma membrane

small GTPase mediated signal transduction

 
201149_s_at 0.583 8.493 2.377 3.098e-02 0.492 -3.630 TIMP3 TIMP metallopeptidase inhibitor 3 22 31526801 U67195 22q12.1-q13.2 22q12.3 Hs.644633 Hs.714168 117

enzyme inhibitor activity

protein binding

extracellular region

basement membrane

visual perception

metalloendopeptidase inhibitor activity

response to organic cyclic substance

tissue regeneration

response to estrogen stimulus

response to stimulus

negative regulation of membrane protein ectodomain proteolysis

 
1555271_a_at 0.231 5.059 2.377 3.099e-02 0.492 -3.630 TERT telomerase reverse transcriptase 5 -1306286 AB085628 5p15.33 Hs.492203 518

telomere maintenance

chromosome, telomeric region

nuclear telomere cap complex

DNA binding

telomeric template RNA reverse transcriptase activity

protein binding

nucleus

nucleoplasm

chromosome

telomerase holoenzyme complex

anti-apoptosis

telomere maintenance via telomerase

senescence

transferase activity

nucleotidyltransferase activity

DNA strand elongation

telomere formation via telomerase

telomeric DNA binding

protein homodimerization activity

telomeric RNA binding

 
220300_at 0.432 4.919 2.377 3.099e-02 0.492 -3.630 RGS3 regulator of G-protein signaling 3 9 115246831, 115265829, 115303527, 115367181, 115382760, 115396020 NM_017790 9q32 Hs.494875 24

inactivation of MAPK activity

signal transducer activity

GTPase activator activity

protein binding

nucleus

cytoplasm

cytosol

plasma membrane

regulation of G-protein coupled receptor protein signaling pathway

negative regulation of signal transduction

Axon guidance

203781_at 0.207 11.411 2.377 3.101e-02 0.492 -3.630 MRPL33 mitochondrial ribosomal protein L33 2 27848087 NM_004891 2p21 Hs.515879 8

structural constituent of ribosome

intracellular

mitochondrion

ribosome

translation

 
236514_at 0.492 5.262 2.377 3.101e-02 0.492 -3.631 ACOT8 acyl-CoA thioesterase 8 20 -43903767 AI885067 20q13.12 Hs.444776 18

carboxylesterase activity

protein binding

peroxisome

lipid metabolic process

acyl-CoA metabolic process

peroxisome organization

acyl-CoA thioesterase activity

hydrolase activity

choloyl-CoA hydrolase activity

interspecies interaction between organisms

 
201514_s_at -0.527 6.900 -2.376 3.106e-02 0.493 -3.632 G3BP1 GTPase activating protein (SH3 domain) binding protein 1 5 151131668 NM_005754 5q33.1 Hs.587054 27

nucleotide binding

DNA binding

RNA binding

ATP-dependent DNA helicase activity

ATP-dependent RNA helicase activity

helicase activity

endonuclease activity

protein binding

ATP binding

intracellular

nucleus

cytoplasm

cytosol

plasma membrane

transport

Ras protein signal transduction

hydrolase activity

 
223193_x_at 0.272 10.789 2.376 3.107e-02 0.493 -3.632 FAM162A family with sequence similarity 162, member A 3 123585712 AF201944 3q21.1 Hs.584881 8

membrane

integral to membrane

 
1553693_s_at 0.356 5.173 2.375 3.108e-02 0.493 -3.632 CBR4 carbonyl reductase 4 4 -170145316 NM_032783 4q32.3 Hs.659311 4

binding

cytoplasm

oxidoreductase activity

oxidation reduction

 
212018_s_at -0.381 8.731 -2.375 3.108e-02 0.493 -3.633 RSL1D1 ribosomal L1 domain containing 1 16 -11835555 AK000822 16p13.13 Hs.401842 17

RNA binding

structural constituent of ribosome

protein binding

intracellular

nucleus

nucleolus

ribosome

RNA processing

translation

regulation of protein localization

 
206976_s_at -0.477 8.022 -2.375 3.113e-02 0.493 -3.634 HSPH1 heat shock 105kDa/110kDa protein 1 13 -30608762 NM_006644 13q12.3 Hs.36927 25

nucleotide binding

ATP binding

cytoplasm

response to unfolded protein

 
207001_x_at -0.340 6.615 -2.375 3.113e-02 0.493 -3.634 TSC22D3 TSC22 domain family, member 3 X -106843107, -106843107, -106843107 NM_004089 Xq22.3 Hs.716410 24

transcription factor activity

regulation of transcription, DNA-dependent

 
212149_at -0.334 9.238 -2.375 3.113e-02 0.493 -3.634 EFR3A EFR3 homolog A (S. cerevisiae) 8 132985540 AW470003 8q24.22 Hs.204564 4

binding

plasma membrane

 
205990_s_at 0.414 6.131 2.375 3.114e-02 0.493 -3.634 WNT5A wingless-type MMTV integration site family, member 5A 3 -55474782 NM_003392 3p21-p14 Hs.696364 68

signal transducer activity

receptor binding

extracellular region

proteinaceous extracellular matrix

extracellular space

soluble fraction

signal transduction

Wnt receptor signaling pathway, calcium modulating pathway

JNK cascade

cell-cell signaling

anatomical structure morphogenesis

embryonic development

cell differentiation

lung development

embryonic limb morphogenesis

cartilage development

Wnt signaling pathway

Hedgehog signaling pathway

Melanogenesis

Pathways in cancer

Basal cell carcinoma

206391_at 0.265 4.967 2.373 3.123e-02 0.494 -3.637 RARRES1 retinoic acid receptor responder (tazarotene induced) 1 3 -159905133, -159897590 NM_002888 3q25.32 Hs.131269 11

negative regulation of cell proliferation

membrane

integral to membrane

 
226750_at -0.419 6.597 -2.373 3.124e-02 0.494 -3.637 LARP1B La ribonucleoprotein domain family, member 1B 4 129201952, 129201952, 129201952 AI767732 4q28.2 Hs.657067 3

RNA binding

 
232337_at -0.187 3.934 -2.372 3.129e-02 0.495 -3.638 B3GNT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 2 231968578 AK000770 2q37.1 Hs.299329 4

Golgi apparatus

protein amino acid glycosylation

galactosyltransferase activity

membrane

integral to membrane

transferase activity, transferring glycosyl groups

Keratan sulfate biosynthesis

Metabolic pathways

203687_at -0.288 6.533 -2.372 3.129e-02 0.495 -3.638 CX3CL1 chemokine (C-X3-C motif) ligand 1 16 55963914 NM_002996 16q13 Hs.531668 100

extracellular region

extracellular space

plasma membrane

chemotaxis

defense response

immune response

cell adhesion

chemokine activity

cell surface

integral to membrane

cytokine-mediated signaling pathway

leukocyte chemotaxis

positive regulation of inflammatory response

leukocyte adhesive activation

positive regulation of calcium-independent cell-cell adhesion

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

225717_at -0.567 6.412 -2.371 3.133e-02 0.495 -3.639 KIAA1715 KIAA1715 2 -176498655 AI814587 2q31 Hs.209561 7

protein binding

multicellular organismal development

membrane

integral to membrane

limb development

 
228055_at 0.309 4.243 2.371 3.138e-02 0.495 -3.641 NAPSB napsin B aspartic peptidase pseudogene 19 -55528868 AI763426 19q13.33 Hs.636624 4    
227666_at 0.177 4.735 2.370 3.139e-02 0.495 -3.641 DCLK2 doublecortin-like kinase 2 4 151219529 AI523594 4q31.23-q31.3 Hs.591683 4

nucleotide binding

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

intracellular signaling cascade

transferase activity

 
1562650_at -0.175 3.069 -2.370 3.140e-02 0.495 -3.641 FRYL FRY-like 4 -48194136 AL833444 4p11 Hs.631525 8

protein binding

regulation of transcription

 
208541_x_at -0.205 6.752 -2.370 3.141e-02 0.495 -3.642 TFAM transcription factor A, mitochondrial 10 59815181 NM_012251 10q21 Hs.642966 50

transcription factor activity

nucleus

mitochondrion

DNA-dependent DNA replication

regulation of transcription from RNA polymerase I promoter

transcription from mitochondrial promoter

mitochondrial nucleoid

regulation of transcription

Huntington's disease

208522_s_at 0.229 4.865 2.370 3.142e-02 0.495 -3.642 PTCH1 patched homolog 1 (Drosophila) 9 -97245084, -97245084, -97245084, -97245084, -97245084 NM_000264 9q22.3 Hs.494538 Hs.638946 96

receptor activity

protein binding

integral to plasma membrane

signal transduction

hedgehog receptor activity

cell proliferation

regulation of smoothened signaling pathway

organ morphogenesis

dorsal/ventral pattern formation

membrane

protein processing

embryonic limb morphogenesis

negative regulation of multicellular organism growth

Hedgehog signaling pathway

Pathways in cancer

Basal cell carcinoma

1555214_a_at 0.209 3.808 2.370 3.143e-02 0.495 -3.642 CLEC7A C-type lectin domain family 7, member A 12 -10171188, -10160646 AF400602 12p13.2 Hs.143929 30

binding

sugar binding

cytoplasm

phagocytosis, recognition

inflammatory response

pattern recognition receptor activity

carbohydrate mediated signaling

membrane

integral to membrane

T cell activation

MHC protein binding

defense response to protozoan

innate immune response

 
223394_at -0.352 6.703 -2.370 3.144e-02 0.495 -3.642 SERTAD1 SERTA domain containing 1 19 -45620248 BC002670 19q13.1-q13.2 Hs.269898 15

regulation of cyclin-dependent protein kinase activity

protein binding

positive regulation of cell proliferation

transcription activator activity

positive regulation of transcription

 
211838_x_at -0.173 5.124 -2.370 3.144e-02 0.495 -3.643 PCDHA5 protocadherin alpha 5 5 140181544, 140181544 AF152483 5q31 Hs.199343 10

calcium ion binding

protein binding

plasma membrane

integral to plasma membrane

cell adhesion

homophilic cell adhesion

nervous system development

 
212291_at 0.361 4.346 2.369 3.146e-02 0.495 -3.643 HIPK1 homeodomain interacting protein kinase 1 1 114273518, 114273518, 114295289, 114298021 AI393355 1p13.2 Hs.532363 11

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

nucleolus

cytoplasm

centrosome

protein amino acid phosphorylation

transferase activity

regulation of transcription

 
233242_at -0.232 4.321 -2.369 3.146e-02 0.495 -3.643 WDR73 WD repeat domain 73 15 -82987014 AL357213 15q25.2 Hs.719288 3    
219901_at 0.375 4.578 2.369 3.148e-02 0.495 -3.644 FGD6 FYVE, RhoGEF and PH domain containing 6 12 -93994655 NM_018351 12q22 Hs.506381 6

ruffle

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

protein binding

intracellular

cytoplasm

Golgi apparatus

cytoskeleton

zinc ion binding

regulation of cell shape

lamellipodium

actin cytoskeleton organization

small GTPase binding

regulation of Rho protein signal transduction

regulation of Cdc42 GTPase activity

filopodium assembly

metal ion binding

 
233880_at 0.218 4.869 2.369 3.148e-02 0.495 -3.644 RNF213 ring finger protein 213 17 75928320 AL161961 17q25.3 Hs.195642 Hs.657519 6

nucleotide binding

protein binding

zinc ion binding

nucleoside-triphosphatase activity

metal ion binding

 
221505_at -0.268 8.351 -2.369 3.150e-02 0.495 -3.644 ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 1 -148457341, -148457341 AW612574 1q21.2 Hs.656466 14

protein binding

nucleus

cytoplasm

cytoplasmic membrane-bounded vesicle

phosphatase inhibitor activity

 
1565765_x_at 0.171 3.379 2.369 3.151e-02 0.495 -3.644 C13orf33 chromosome 13 open reading frame 33 13 30378311 AL832478 13q12.3 Hs.646647 Hs.708377 4    
221191_at 0.195 4.968 2.368 3.151e-02 0.495 -3.644 STAG3L1 stromal antigen 3-like 1 7 74826382 NM_018991 7q11.23-q21.1 Hs.632310 Hs.661254 Hs.709564 2    
203798_s_at -0.361 2.981 -2.368 3.152e-02 0.495 -3.645 VSNL1 visinin-like 1 2 17585287 NM_003385 2p24.3 Hs.444212 29

calcium ion binding

 
209132_s_at 0.336 6.451 2.368 3.154e-02 0.495 -3.645 COMMD4 COMM domain containing 4 15 73415426 BE313890 15q24.2 Hs.351327 8

protein binding

cytoplasm

 
1555603_at 0.194 2.416 2.368 3.155e-02 0.495 -3.646 BAGE B melanoma antigen 21 -10079666 AF527551 21p11.1 Hs.545789 Hs.624542 Hs.624543 7

extracellular region

 
226319_s_at 0.301 7.666 2.368 3.156e-02 0.495 -3.646 THOC4 THO complex 4 17 -77439008 AF047002 17q25.3 Hs.534385 26

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

spliceosomal complex

cytoplasm

transport

RNA splicing

nuclear speck

mRNA transport

 
235616_at 0.231 4.398 2.367 3.157e-02 0.495 -3.646 TSHZ2 teashirt zinc finger homeobox 2 20 51022283 AI694059 20q13.2 Hs.271605 Hs.473117 Hs.649877 6

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

sequence-specific DNA binding

metal ion binding

 
209568_s_at 0.362 6.717 2.367 3.157e-02 0.495 -3.646 RGL1 ral guanine nucleotide dissociation stimulator-like 1 1 181871830 AF186779 1q25.3 Hs.497148 6

guanyl-nucleotide exchange factor activity

protein binding

cellular_component

intracellular

signal transduction

Ral guanyl-nucleotide exchange factor activity

regulation of small GTPase mediated signal transduction

 
1555814_a_at -0.354 9.327 -2.367 3.158e-02 0.495 -3.646 RHOA ras homolog gene family, member A 3 -49371582 AF498970 3p21.3 Hs.247077 Hs.709788 348

nucleotide binding

magnesium ion binding

cell morphogenesis

GTPase activity

protein binding

GTP binding

intracellular

nucleus

cytoplasm

cytoskeleton

plasma membrane

regulation of transcription from RNA polymerase II promoter

cell adhesion

cell-matrix adhesion

small GTPase mediated signal transduction

Rho protein signal transduction

skeletal muscle tissue development

myosin binding

actin cytoskeleton organization

cell differentiation

positive regulation of NF-kappaB import into nucleus

positive regulation of I-kappaB kinase/NF-kappaB cascade

negative regulation of neuron apoptosis

interspecies interaction between organisms

negative regulation of neuron differentiation

positive regulation of neuron differentiation

positive regulation of stress fiber formation

Chemokine signaling pathway

Vascular smooth muscle contraction

Wnt signaling pathway

TGF-beta signaling pathway

Axon guidance

Focal adhesion

Adherens junction

Tight junction

T cell receptor signaling pathway

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Pathogenic Escherichia coli infection - EHEC

Pathways in cancer

227798_at 0.375 7.699 2.367 3.162e-02 0.495 -3.647 SMAD1 SMAD family member 1 4 146622400, 146623406 AU146891 4q31 Hs.604588 118

MAPKKK cascade

mesodermal cell fate commitment

osteoblast fate commitment

transcription factor activity

RNA polymerase II transcription factor activity

receptor signaling protein activity

intracellular

nucleus

nucleoplasm

transcription factor complex

cytoplasm

cytosol

inflammatory response

signal transduction

transforming growth factor beta receptor signaling pathway

SMAD protein complex assembly

gamete generation

negative regulation of cell proliferation

embryonic pattern specification

positive regulation of gene expression

integral to membrane

transcription activator activity

BMP signaling pathway

BMP signaling pathway

transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity

midbrain development

hindbrain development

primary microRNA processing

homeostatic process

identical protein binding

positive regulation of osteoblast differentiation

positive regulation of transcription from RNA polymerase II promoter

co-SMAD binding

TGF-beta signaling pathway

1561660_at -0.276 2.591 -2.367 3.162e-02 0.495 -3.647 MCART6 mitochondrial carrier triple repeat 6 X -103230553 AL833609 Xq22.2 Hs.660022 1

binding

mitochondrion

mitochondrial inner membrane

transport

membrane

integral to membrane

 
207910_at 0.229 3.144 2.366 3.166e-02 0.495 -3.648 SCGB1D1 secretoglobin, family 1D, member 1 11 61714285 NM_006552 11q13 Hs.202686 4

binding

extracellular region

extracellular space

 
206993_at 0.533 7.515 2.366 3.166e-02 0.495 -3.649 ATP5S ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s (factor B) 14 49848796, 49848796 NM_015684 14q21.3 Hs.438489 12

mitochondrion

mitochondrial inner membrane

ATP biosynthetic process

ion transport

hydrogen ion transmembrane transporter activity

proton transport

membrane

proton-transporting ATP synthase complex, coupling factor F(o)

 
221810_at 0.296 5.284 2.366 3.168e-02 0.495 -3.649 RAB15 RAB15, member RAS onocogene family 14 -64482284 AA631242 14q23.3 Hs.512492 11

nucleotide binding

GTP binding

plasma membrane

small GTPase mediated signal transduction

protein transport

 
225998_at -0.671 5.872 -2.366 3.169e-02 0.495 -3.649 GAB1 GRB2-associated binding protein 1 4 144477432 AK022142 4q31.21 Hs.618456 Hs.80720 69

SH3/SH2 adaptor activity

protein binding

cytosol

epidermal growth factor receptor signaling pathway

cell proliferation

insulin receptor signaling pathway

ErbB signaling pathway

Neurotrophin signaling pathway

Renal cell carcinoma

202822_at 0.351 7.884 2.365 3.173e-02 0.496 -3.650 LPP LIM domain containing preferred translocation partner in lipoma 3 189413414 BF221852 3q28 Hs.444362 30

molecular_function

protein binding

cellular_component

nucleus

cytoplasm

plasma membrane

focal adhesion

cell adhesion

biological_process

zinc ion binding

cell junction

metal ion binding

 
228046_at 0.336 7.204 2.364 3.181e-02 0.497 -3.653 ZNF827 zinc finger protein 827 4 -146901337 AA741243 4q31.21-q31.22 Hs.133916 Hs.633543 7

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
226985_at 0.229 5.909 2.362 3.189e-02 0.497 -3.655 FGD5 FYVE, RhoGEF and PH domain containing 5 3 14835472 AW269340 3p25.1 Hs.412406 4

ruffle

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

protein binding

intracellular

cytoplasm

Golgi apparatus

cytoskeleton

zinc ion binding

regulation of cell shape

lamellipodium

actin cytoskeleton organization

small GTPase binding

regulation of Rho protein signal transduction

regulation of Cdc42 GTPase activity

filopodium assembly

metal ion binding

 
220173_at 0.302 4.762 2.362 3.192e-02 0.498 -3.656 C14orf45 chromosome 14 open reading frame 45 14 73555811 NM_025057 14q24.3 Hs.644621 5    
204156_at 0.335 5.842 2.361 3.194e-02 0.498 -3.656 QSK serine/threonine-protein kinase QSK 11 -116219327 AA044154 11q23.3 Hs.167451 14

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

transferase activity

 
234956_at -0.250 5.402 -2.361 3.197e-02 0.498 -3.657 LOC93444 hypothetical protein LOC93444 15   AK000175 15q22.32 Hs.270133      
214183_s_at 0.542 4.083 2.361 3.199e-02 0.498 -3.657 TKTL1 transketolase-like 1 X 153177220, 153186602 X91817 Xq28 Hs.102866 21

transketolase activity

calcium ion binding

nucleus

cytoplasm

glucose catabolic process

thiamin metabolic process

metabolic process

transferase activity

Pentose phosphate pathway

Carbon fixation in photosynthetic organisms

Biosynthesis of phenylpropanoids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of plant hormones

Metabolic pathways

227416_s_at 0.205 9.919 2.360 3.203e-02 0.498 -3.659 ZCRB1 zinc finger CCHC-type and RNA binding motif 1 12 -40992154 BE265803 12q12 Hs.496279 5

nucleotide binding

RNA binding

nucleus

nucleoplasm

U12-type spliceosomal complex

mRNA processing

zinc ion binding

RNA splicing

metal ion binding

 
1558846_at 0.247 2.802 2.360 3.204e-02 0.498 -3.659 PNLIPRP3 pancreatic lipase-related protein 3 10 118177413 AL833418 10q25.3 Hs.276724 1

triacylglycerol lipase activity

extracellular region

lipid catabolic process

hydrolase activity

 
223019_at 0.231 6.214 2.360 3.205e-02 0.498 -3.659 FAM129B family with sequence similarity 129, member B 9 -129307438, -129307438 BC001979 9q33.3-q34.11 Hs.522401 8    
236605_at 0.206 5.721 2.360 3.206e-02 0.498 -3.659 EIF3K eukaryotic translation initiation factor 3, subunit K 19 43801561 AA470798 19q13.2 Hs.314359 15

translation initiation factor activity

translation initiation factor activity

protein binding

nucleus

cytoplasm

cytosol

eukaryotic translation initiation factor 3 complex

regulation of translational initiation

ribosome binding

 
1562403_a_at -0.359 7.147 -2.359 3.207e-02 0.498 -3.660 SLC8A3 solute carrier family 8 (sodium/calcium exchanger), member 3 14 -69580686, -69580686, -69580686 AK096553 14q24.1 Hs.337696 16

calcium:sodium antiporter activity

calcium ion binding

calmodulin binding

ion transport

sodium ion transport

calcium ion transport

cell communication

antiporter activity

membrane

integral to membrane

sodium ion binding

Calcium signaling pathway

203191_at -0.252 5.297 -2.359 3.208e-02 0.498 -3.660 ABCB6 ATP-binding cassette, sub-family B (MDR/TAP), member 6 2 -219782737 AF308472 2q36 Hs.107911 15

nucleotide binding

ATP binding

mitochondrion

mitochondrial envelope

mitochondrial outer membrane

transport

cellular iron ion homeostasis

membrane

integral to membrane

ATPase activity

ATPase activity, coupled to transmembrane movement of substances

ATP-binding cassette (ABC) transporter complex

ABC transporters

222629_at 0.485 5.370 2.359 3.209e-02 0.498 -3.660 REV1 REV1 homolog (S. cerevisiae) 2 -99383369 N51427 2q11.1-q11.2 Hs.443077 27

magnesium ion binding

damaged DNA binding

DNA-directed DNA polymerase activity

protein binding

intracellular

nucleus

DNA replication

DNA repair

response to DNA damage stimulus

response to UV

transferase activity

deoxycytidyl transferase activity

error-prone postreplication DNA repair

 
221912_s_at 0.427 8.726 2.359 3.210e-02 0.498 -3.660 CCDC28B coiled-coil domain containing 28B 1 32438788 AL049795 1p35.1 Hs.718470 10    
1568629_s_at 0.237 7.774 2.358 3.214e-02 0.499 -3.662 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 19 18125015 BC033311 19q13.2-q13.4 Hs.371344 68

protein binding

intracellular

cytosol

phosphoinositide 3-kinase complex

signal transduction

1-phosphatidylinositol-3-kinase activity

negative regulation of anti-apoptosis

phosphoinositide 3-kinase regulator activity

ErbB signaling pathway

Chemokine signaling pathway

Phosphatidylinositol signaling system

mTOR signaling pathway

Apoptosis

VEGF signaling pathway

Focal adhesion

Toll-like receptor signaling pathway

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Insulin signaling pathway

Type II diabetes mellitus

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Chronic myeloid leukemia

Acute myeloid leukemia

Small cell lung cancer

Non-small cell lung cancer

212049_at 0.207 6.240 2.358 3.215e-02 0.499 -3.662 WIPF2 WAS/WASL interacting protein family, member 2 17 35629099 BG230612 17q21.1-q21.2 Hs.421622 Hs.705989 11

actin binding

cytoplasm

cytoskeleton

 
243346_at -0.366 9.852 -2.358 3.215e-02 0.499 -3.662 LMOD3 leiomodin 3 (fetal) 3 -69238728 BF109621 3p14.1 Hs.350621 9

tropomyosin binding

cytoplasm

cytoskeleton

 
200045_at -0.292 8.182 -2.358 3.217e-02 0.499 -3.662 ABCF1 ATP-binding cassette, sub-family F (GCN20), member 1 6 30647148, 1987727, 1786022 NM_001090 6p21.33 Hs.655285 15

nucleotide binding

ATP binding

translation

inflammatory response

translation factor activity, nucleic acid binding

ATPase activity

ATPase activity, coupled to transmembrane movement of substances

 
203642_s_at 0.333 4.977 2.358 3.218e-02 0.499 -3.663 COBLL1 COBL-like 1 2 -165249503 NM_014900 2q24.3 Hs.470457 9    
225805_at -0.389 5.331 -2.357 3.221e-02 0.499 -3.664 HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 1 -243080224 AW137669 1q44 Hs.106212 47

nucleotide binding

nuclear mRNA splicing, via spliceosome

DNA binding

RNA binding

protein binding

ATP binding

nucleus

spliceosomal complex

RNA splicing

cell surface

heterogeneous nuclear ribonucleoprotein complex

 
211033_s_at 0.393 7.209 2.357 3.221e-02 0.499 -3.664 PEX7 peroxisomal biogenesis factor 7 6 137185394 BC006268 6q23.3 Hs.280932 21

peroxisome matrix targeting signal-2 binding

cytoplasm

peroxisome

visual perception

ether lipid biosynthetic process

protein transport

protein import into peroxisome matrix

response to stimulus

 
1563426_a_at 0.307 4.127 2.357 3.222e-02 0.499 -3.664 LOC644613 hypothetical protein LOC644613 11   BC025792 11q13.1 Hs.604039 1    
235822_at 0.375 6.208 2.357 3.223e-02 0.499 -3.664 COQ9 coenzyme Q9 homolog (S. cerevisiae) 16 56038902 AW273049 16q21 Hs.513632 7

mitochondrion

ubiquinone biosynthetic process

 
1553023_a_at -0.198 4.054 -2.357 3.224e-02 0.499 -3.664 NOX5 NADPH oxidase, EF-hand calcium binding domain 5 15 67009917 NM_024505 15q23 Hs.657932 27

cytokinesis

ion channel activity

calcium ion binding

ion transport

induction of apoptosis

cell proliferation

electron carrier activity

regulation of proton transport

hydrogen ion channel activity

hydrogen ion channel activity

membrane

integral to membrane

superoxide-generating NADPH oxidase activity

superoxide-generating NADPH oxidase activity

oxidoreductase activity

heme binding

electron transport chain

superoxide anion generation

superoxide anion generation

regulation of fusion of sperm to egg plasma membrane

FAD binding

NADP or NADPH binding

cytokine secretion

 
1564637_a_at 0.268 7.701 2.357 3.224e-02 0.499 -3.664 FAM98B family with sequence similarity 98, member B 15 36533619, 36533619 BC035600 15q14 Hs.6799 5

protein binding

 
1559651_at -0.240 2.712 -2.357 3.225e-02 0.499 -3.665 CSNK1A1P casein kinase 1, alpha 1 pseudogene 15 -34878593 BC028192 15q14 Hs.659822 1    
207570_at 0.229 5.913 2.356 3.227e-02 0.499 -3.665 SHOX short stature homeobox X, Y 505078, 505078, 505078, 505078 NM_000451 Xp22.33 Yp11.3 Hs.105932 48

skeletal system development

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

multicellular organismal development

sequence-specific DNA binding

 
205913_at 0.644 5.958 2.356 3.227e-02 0.499 -3.665 PLIN1 perilipin 1 15 -88008602 NM_002666 15q26 Hs.103253 42

protein binding

lipid binding

monolayer-surrounded lipid storage body

lipid catabolic process

PPAR signaling pathway

209149_s_at 0.226 5.555 2.356 3.229e-02 0.499 -3.666 TM9SF1 transmembrane 9 superfamily member 1 14 -23729083, -23728192 BE899402 14q11.2 Hs.91586 5

membrane

integral to membrane

 
224690_at 0.516 9.832 2.356 3.230e-02 0.499 -3.666 C20orf108 chromosome 20 open reading frame 108 20 54367389 BG432350 20q13.2 Hs.143736 Hs.593629 6

membrane

integral to membrane

 
227933_at -0.246 5.081 -2.356 3.232e-02 0.499 -3.666 LINGO1 leucine rich repeat and Ig domain containing 1 15 -75692423 AI193252 15q24.3 Hs.656765 14    
229854_at 0.274 9.795 2.356 3.232e-02 0.499 -3.666 OBSCN obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF 1 226462483, 226462483 AW614056 1q42.13 Hs.650039 Hs.656999 23

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

Rho guanyl-nucleotide exchange factor activity

protein binding

ATP binding

intracellular

nucleus

cytoplasm

plasma membrane

protein amino acid phosphorylation

multicellular organismal development

structural constituent of muscle

transferase activity

myofibril

Z disc

cell differentiation

M band

titin binding

regulation of Rho protein signal transduction

 
242396_at 0.270 3.868 2.355 3.233e-02 0.499 -3.667 LOC100132798 similar to hCG1774772 15   AA195408 15q26.2        
201628_s_at -0.250 9.819 -2.355 3.234e-02 0.499 -3.667 RRAGA Ras-related GTP binding A 9 19039371 NM_006570 9p22.1 Hs.432330 10

nucleotide binding

GTP binding

nucleus

cytoplasm

Golgi apparatus

apoptosis

cell death

virus-host interaction

protein homodimerization activity

interspecies interaction between organisms

positive regulation of cytolysis

protein heterodimerization activity

phosphoprotein binding

 
223103_at 0.335 7.374 2.355 3.236e-02 0.499 -3.668 STARD10 StAR-related lipid transfer (START) domain containing 10 11 -72143421 AF151810 11q13 Hs.188606 8    
217649_at -0.264 3.697 -2.355 3.237e-02 0.499 -3.668 ZFAND5 zinc finger, AN1-type domain 5 9 -74156160 AV702306 9q13-q21 Hs.406096 6

in utero embryonic development

vasculature development

respiratory system process

molecular_function

DNA binding

cellular_component

biological_process

zinc ion binding

fibroblast migration

metal ion binding

platelet-derived growth factor receptor signaling pathway

skeletal system morphogenesis

smooth muscle tissue development

face development

 
235619_at -0.539 8.613 -2.355 3.238e-02 0.499 -3.668 LOC285986 hypothetical protein LOC285986 7   AI681644 7q21.3 Hs.602765 1    
211029_x_at 0.275 4.014 2.355 3.238e-02 0.499 -3.668 FGF18 fibroblast growth factor 18 5 170779271 BC006245 5q34 Hs.87191 25

angiogenesis

intramembranous ossification

endochondral ossification

chondrocyte development

extracellular region

extracellular region

extracellular space

nucleolus

signal transduction

cell-cell signaling

growth factor activity

positive regulation of cell proliferation

fibroblast growth factor receptor signaling pathway

anatomical structure morphogenesis

lung development

positive regulation of vascular endothelial growth factor receptor signaling pathway

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

201042_at 0.320 6.969 2.354 3.242e-02 0.499 -3.669 TGM2 transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase) 20 -36199764, -36190277 AL031651 20q12 Hs.517033 141

blood vessel remodeling

protein-glutamine gamma-glutamyltransferase activity

calcium ion binding

GTP binding

mitochondrion

plasma membrane

induction of apoptosis

acyltransferase activity

transferase activity

peptide cross-linking

isopeptide cross-linking via N6-(L-isoglutamyl)-L-lysine

protein domain specific binding

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of cell adhesion

positive regulation of smooth muscle cell proliferation

positive regulation of inflammatory response

protein homooligomerization

elevation of cytosolic calcium ion concentration during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)

Huntington's disease

208016_s_at -0.330 5.154 -2.354 3.243e-02 0.499 -3.669 AGTR1 angiotensin II receptor, type 1 3 149898347, 149930656 NM_004835 3q21-q25 Hs.477887 Hs.719071 524

regulation of cell growth

angiotensin type I receptor activity

angiotensin type I receptor activity

kidney development

renin-angiotensin regulation of aldosterone production

regulation of blood vessel size by renin-angiotensin

regulation of natriuresis

receptor activity

G-protein coupled receptor activity

angiotensin type II receptor activity

plasma membrane

integral to plasma membrane

oxygen and reactive oxygen species metabolic process

signal transduction

acetyltransferase activator activity

positive regulation of foam cell differentiation

positive regulation of cholesterol esterification

regulation of vasoconstriction

regulation of vasoconstriction

regulation of vasoconstriction

calcium-mediated signaling

bradykinin receptor binding

positive regulation of cellular protein metabolic process

positive regulation of phospholipase A2 activity

positive regulation of NAD(P)H oxidase activity

low-density lipoprotein particle remodeling

regulation of cell proliferation

regulation of vasodilation

protein heterodimerization activity

positive regulation of inflammatory response

elevation of cytosolic calcium ion concentration during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)

Calcium signaling pathway

Neuroactive ligand-receptor interaction

Vascular smooth muscle contraction

Renin-angiotensin system

225627_s_at -0.280 5.425 -2.354 3.244e-02 0.499 -3.670 CACHD1 cache domain containing 1 1 64709063 AK024256 1p31.3 Hs.708156 4

calcium ion binding

ion transport

calcium ion transport

membrane

integral to membrane

 
205024_s_at -0.177 4.407 -2.354 3.244e-02 0.499 -3.670 RAD51 RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae) 15 38774650 NM_002875 15q15.1 Hs.631709 241

recombinase activity

nucleotide binding

double-strand break repair via homologous recombination

condensed nuclear chromosome

damaged DNA binding

double-stranded DNA binding

double-stranded DNA binding

single-stranded DNA binding

single-stranded DNA binding

ATP binding

nucleus

nucleus

nucleoplasm

DNA unwinding during replication

DNA repair

mitotic recombination

response to DNA damage stimulus

meiosis

reciprocal meiotic recombination

protein C-terminus binding

PML body

ATPase activity

identical protein binding

single-stranded DNA-dependent ATPase activity

positive regulation of DNA ligation

protein homooligomerization

Homologous recombination

Pathways in cancer

Pancreatic cancer

212430_at -0.487 7.854 -2.352 3.251e-02 0.499 -3.672 RBM38 RNA binding motif protein 38 20 55399869 AL109955 20q13.31 Hs.236361 6

nucleotide binding

mRNA 3'-UTR binding

nucleus

cytoplasm

cytosol

mRNA processing

DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest

DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator

cell cycle

regulation of RNA splicing

protein stabilization

 
227696_at 0.475 8.541 2.352 3.251e-02 0.499 -3.672 EXOSC6 exosome component 6 16 -68841634 AI701408 16q22.1 Hs.660633 Hs.719211 9

3'-5'-exoribonuclease activity

exosome (RNase complex)

RNA binding

exonuclease activity

nucleus

nucleolus

cytoplasm

rRNA processing

RNA processing

hydrolase activity

RNA degradation

232524_x_at -0.276 6.754 -2.352 3.257e-02 0.499 -3.673 ANAPC4 anaphase promoting complex subunit 4 4 24987945 AK001881 4p15.2 Hs.152173 21

G2/M transition of mitotic cell cycle

mitotic anaphase

ubiquitin-protein ligase activity

nucleoplasm

anaphase-promoting complex

cytosol

ubiquitin-dependent protein catabolic process

cell cycle

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

cell division

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

222049_s_at 0.207 3.313 2.351 3.258e-02 0.499 -3.673 RBP4 retinol binding protein 4, plasma 10 -95341582 AA908769 10q23-q24 Hs.50223 110

eye development

eye development

transporter activity

binding

extracellular region

extracellular space

extracellular space

gluconeogenesis

gluconeogenesis

transport

visual perception

retinal binding

retinol binding

maintenance of gastrointestinal epithelium

lung development

positive regulation of insulin secretion

response to retinoic acid

retinol transporter activity

retinol transport

retinol metabolic process

glucose homeostasis

embryonic organ morphogenesis

embryonic skeletal system development

cardiac muscle tissue development

female genitalia morphogenesis

response to stimulus

positive regulation of immunoglobulin secretion

negative regulation of cardiac muscle cell proliferation

embryonic retina morphogenesis in camera-type eye

uterus development

vagina development

urinary bladder development

heart trabecula formation

 
52285_f_at -0.487 3.813 -2.351 3.259e-02 0.499 -3.674 CEP76 centrosomal protein 76kDa 18 -12662630 AW002970 18p11.21 Hs.236940 7

protein binding

centriole

regulation of centriole replication

 
202056_at -0.416 8.604 -2.351 3.260e-02 0.499 -3.674 KPNA1 karyopherin alpha 1 (importin alpha 5) 3 -123623437 AW051311 3q21 Hs.161008 92

regulation of DNA recombination

protein binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

cytosol

NLS-bearing substrate import into nucleus

intracellular protein transport

nuclear localization sequence binding

protein transporter activity

interspecies interaction between organisms

 
202313_at -0.192 8.633 -2.351 3.262e-02 0.499 -3.675 PPP2R2A protein phosphatase 2 (formerly 2A), regulatory subunit B, alpha isoform 8 26204950 NM_002717 8p21.2 Hs.146339 44

protein phosphatase type 2A complex

protein serine/threonine phosphatase activity

protein binding

protein amino acid dephosphorylation

signal transduction

protein phosphatase type 2A regulator activity

response to morphine

Tight junction

228086_at 0.303 4.294 2.350 3.264e-02 0.499 -3.675 STK33 serine/threonine kinase 33 11 -8369993 AI703417 11p15.3 Hs.501833 8

nucleotide binding

protein serine/threonine kinase activity

ATP binding

nucleus

cytoplasm

Golgi apparatus

protein amino acid phosphorylation

transferase activity

perinuclear region of cytoplasm

 
226957_x_at -0.322 5.153 -2.350 3.266e-02 0.499 -3.675 RALBP1 ralA binding protein 1 18 9465529 BF433757 18p11.3 Hs.528993 Hs.719181 42

GTPase activator activity

protein binding

intracellular

transport

chemotaxis

signal transduction

small GTPase mediated signal transduction

membrane

ATPase activity

Ral GTPase binding

Rac GTPase activator activity

regulation of GTPase activity

positive regulation of Cdc42 GTPase activity

ATPase activity, coupled to movement of substances

Rac GTPase binding

Pathways in cancer

Pancreatic cancer

1554873_at -0.211 3.752 -2.350 3.266e-02 0.499 -3.676 CSPP1 centrosome and spindle pole associated protein 1 8 68139156 BC029445 8q13.1-q13.2 Hs.370147 6

centrosome

microtubule

 
217816_s_at -0.259 9.041 -2.350 3.267e-02 0.499 -3.676 PCNP PEST proteolytic signal containing nuclear protein 3 102775731 NM_020357 3q12.3 Hs.545311 Hs.654949 6

protein binding

nucleus

cell cycle

protein ubiquitination

proteasomal ubiquitin-dependent protein catabolic process

 
AFFX-HSAC07/X00351_5_at -0.226 11.188 -2.350 3.267e-02 0.499 -3.676 ACTB actin, beta 7 -5533304 AFFX-HSAC07/X00351_5 7p15-p12 Hs.520640 Hs.708120 206

nucleotide binding

structural constituent of cytoskeleton

protein binding

ATP binding

soluble fraction

cytoplasm

cytosol

cell motion

cortical cytoskeleton

NuA4 histone acetyltransferase complex

nitric-oxide synthase binding

MLL5-L complex

Focal adhesion

Adherens junction

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Vibrio cholerae infection

Pathogenic Escherichia coli infection - EHEC

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

233446_at 0.300 3.362 2.350 3.268e-02 0.499 -3.676 ONECUT2 one cut homeobox 2 18 53253914 AU145336 18q21.1-q21.2 Hs.194725 7

liver development

regulation of cell-matrix adhesion

epithelial cell development

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription, DNA-dependent

organ morphogenesis

positive regulation of cell migration

negative regulation of transforming growth factor beta receptor signaling pathway

endocrine pancreas development

cilium assembly

sequence-specific DNA binding

cell fate commitment

positive regulation of transcription from RNA polymerase II promoter

peripheral nervous system neuron development

 
241816_at 0.226 4.184 2.349 3.270e-02 0.499 -3.677 C14orf106 chromosome 14 open reading frame 106 14 -44742142 AW103300 14q21.2 Hs.437941 10

chromosome, centromeric region

DNA binding

nucleus

cell cycle

mitosis

cell division

 
228135_at -0.320 7.598 -2.349 3.271e-02 0.499 -3.677 C1orf52 chromosome 1 open reading frame 52 1 -85488226 AA738437 1p22.3 Hs.26226 7    
210093_s_at 0.250 5.940 2.349 3.272e-02 0.499 -3.677 MAGOH mago-nashi homolog, proliferation-associated (Drosophila) 1 -53465151 AF067173 1p34-p33 Hs.421576 24

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

spliceosomal complex

cytoplasm

transport

RNA splicing

nuclear speck

exon-exon junction complex

mRNA transport

 
226164_x_at 0.386 5.187 2.349 3.272e-02 0.499 -3.677 RIMKLB ribosomal modification protein rimK-like family member B 12 8741784 AI760919 12p13.31 Hs.504670 4

nucleotide binding

catalytic activity

ATP binding

protein modification process

manganese ion binding

metal ion binding

 
1558247_s_at 0.231 3.351 2.349 3.273e-02 0.499 -3.677 NTN5 netrin 5 19 -53856475 BC021210 19q13.33 Hs.326217 1

protein binding

extracellular region

 
206542_s_at -0.407 8.391 -2.349 3.273e-02 0.499 -3.677 SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 9 2005341 AV725365 9p22.3 Hs.298990 63

nucleotide binding

DNA binding

transcription coactivator activity

helicase activity

protein binding

ATP binding

nucleus

nucleoplasm

chromatin remodeling

regulation of transcription from RNA polymerase II promoter

DNA-dependent ATPase activity

positive regulation of specific transcription from RNA polymerase II promoter

negative regulation of specific transcription from RNA polymerase II promoter

SWI/SNF complex

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

 
244065_at -0.455 3.968 -2.349 3.274e-02 0.499 -3.678 LOC643827 similar to cell recognition molecule CASPR3 9   AW016751 9q12        
232160_s_at -0.298 6.866 -2.349 3.274e-02 0.499 -3.678 TNIP2 TNFAIP3 interacting protein 2 4 -2713184, -2713184 AL137262 4p16.3 Hs.719161 20

protein binding

cytoplasm

I-kappaB kinase/NF-kappaB cascade

 
219967_at -0.176 5.597 -2.348 3.276e-02 0.500 -3.678 MRM1 mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) 17 32032137 NM_024864 17q12 Hs.194864 4

RNA binding

mitochondrion

RNA processing

RNA methyltransferase activity

transferase activity

 
227775_at 0.191 3.725 2.348 3.277e-02 0.500 -3.679 BRUNOL6 bruno-like 6, RNA binding protein (Drosophila) 15 -70364121 BE467313 15q24 Hs.348342 5

nucleotide binding

regulation of alternative nuclear mRNA splicing, via spliceosome

RNA binding

nucleus

cytoplasm

mRNA processing

 
225053_at -0.259 10.293 -2.348 3.278e-02 0.500 -3.679 CNOT7 CCR4-NOT transcription complex, subunit 7 8 -17133392, -17131110 W94952 8p22-p21.3 Hs.645009 Hs.719129 19

nucleic acid binding

transcription factor activity

signal transducer activity

protein binding

nucleus

carbohydrate metabolic process

signal transduction

transcription activator activity

CCR4-NOT complex

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

RNA degradation

240479_at 0.287 5.098 2.348 3.281e-02 0.500 -3.679 HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 6 -114483442 AW449310 6q21 Hs.645477 8

protein binding

Golgi apparatus

protein amino acid sulfation

sulfotransferase activity

[heparan sulfate]-glucosamine 3-sulfotransferase 1 activity

heparan sulfate proteoglycan biosynthetic process, enzymatic modification

membrane

integral to membrane

transferase activity

regulation of virion penetration into host cell

3'-phosphoadenosine 5'-phosphosulfate binding

negative regulation of coagulation

Heparan sulfate biosynthesis

231406_at 0.234 5.101 2.348 3.281e-02 0.500 -3.680 ORAI2 ORAI calcium release-activated calcium modulator 2 7 101861000 AW205664 7q22.1 Hs.363308 12

membrane

integral to membrane

 
220862_s_at 0.249 5.447 2.347 3.286e-02 0.500 -3.681 USP22 ubiquitin specific peptidase 22 17 -20843497 NM_014093 17p11.2 Hs.462492 10

SAGA complex

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

ubiquitin-specific protease activity

protein binding

nucleus

ubiquitin-dependent protein catabolic process

cell cycle

peptidase activity

cysteine-type peptidase activity

zinc ion binding

embryonic development

H4 histone acetyltransferase activity

chromatin modification

histone ubiquitination

histone deubiquitination

ligand-dependent nuclear receptor transcription coactivator activity

positive regulation of mitotic cell cycle

positive regulation of transcription

metal ion binding

 
1555979_at -0.258 4.398 -2.346 3.290e-02 0.500 -3.682 FLJ39609 similar to hCG1995469 1 -842817 CA447406 1p36.33 Hs.200644 2    
1564972_x_at -0.203 2.995 -2.346 3.291e-02 0.500 -3.682 SETDB2 SET domain, bifurcated 2 13 48916429, 48923688 AF277186 13q14 Hs.631789 Hs.633823 6

DNA binding

nucleus

methyltransferase activity

zinc ion binding

chromatin modification

transferase activity

histone-lysine N-methyltransferase activity

Lysine degradation

230266_at 0.415 5.235 2.346 3.291e-02 0.500 -3.682 RAB7B RAB7B, member RAS oncogene family 1   AI127991 1q32 Hs.534612 4

nucleotide binding

GTP binding

lysosome

small GTPase mediated signal transduction

protein transport

 
201962_s_at -0.419 6.710 -2.346 3.291e-02 0.500 -3.682 RNF41 ring finger protein 41 12 -54884552, -54884552 NM_005785 12q13.2-q13.3 Hs.524502 13

protein binding

zinc ion binding

protein ubiquitination

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

protein tag

metal ion binding

Endocytosis

213918_s_at -0.269 5.516 -2.346 3.292e-02 0.500 -3.682 NIPBL Nipped-B homolog (Drosophila) 5 36912617 BF221673 5p13.2 Hs.481927 22

protein binding

nucleus

cell cycle

cohesin loading complex

maintenance of mitotic sister chromatid cohesion

 
1556567_at 0.232 4.860 2.346 3.293e-02 0.500 -3.683 NAP1L4 nucleosome assembly protein 1-like 4 11 -2922235 BE087543 11p15.5 Hs.501684 Hs.695395 12

nucleus

chromatin assembly complex

cytoplasm

nucleosome assembly

unfolded protein binding

 
219553_at 0.335 6.196 2.346 3.295e-02 0.501 -3.683 NME7 non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase) 1 -167368396, -167368392 NM_013330 1q24 Hs.706952 10

nucleotide binding

magnesium ion binding

nucleoside diphosphate kinase activity

ATP binding

GTP biosynthetic process

UTP biosynthetic process

CTP biosynthetic process

nucleotide metabolic process

kinase activity

transferase activity

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

212447_at -0.362 8.214 -2.345 3.298e-02 0.501 -3.684 KBTBD2 kelch repeat and BTB (POZ) domain containing 2 7 -32874302 AF161402 7p14.3 Hs.372541 4

protein binding

 
1555543_a_at -0.373 5.470 -2.345 3.299e-02 0.501 -3.684 CLCC1 chloride channel CLIC-like 1 1 -109273652 AB052917 1p13.3 Hs.658489 6

nucleus

endoplasmic reticulum

Golgi apparatus

membrane

integral to membrane

 
41512_at -0.396 6.164 -2.345 3.300e-02 0.501 -3.684 BRAP BRCA1 associated protein 12 -110564332 AL042733 12q24 Hs.530940 12

ubiquitin-protein ligase activity

cytoplasm

zinc ion binding

negative regulation of signal transduction

ligase activity

modification-dependent protein catabolic process

identical protein binding

metal ion binding

 
213523_at 0.221 5.997 2.345 3.301e-02 0.501 -3.685 CCNE1 cyclin E1 19 34994740, 34995400 AI671049 19q12 Hs.244723 144

G1/S transition of mitotic cell cycle

transcription coactivator activity

protein binding

nucleus

nucleoplasm

cytosol

cell cycle

androgen receptor signaling pathway

positive regulation of transcription, DNA-dependent

androgen receptor binding

cell division

Cell cycle

p53 signaling pathway

Pathways in cancer

Prostate cancer

Small cell lung cancer

211672_s_at -0.352 6.332 -2.345 3.301e-02 0.501 -3.685 ARPC4 actin related protein 2/3 complex, subunit 4, 20kDa 3 9809226 AF019888 3p25.3 Hs.323342 16

cytoplasm

cytoskeleton

Arp2/3 protein complex

actin filament polymerization

protein binding, bridging

cell projection

actin nucleation

actin filament binding

Fc gamma R-mediated phagocytosis

Regulation of actin cytoskeleton

206024_at 0.246 3.309 2.344 3.305e-02 0.501 -3.686 HPD 4-hydroxyphenylpyruvate dioxygenase 12 -120761815 NM_002150 12q24-qter Hs.2899 11

4-hydroxyphenylpyruvate dioxygenase activity

iron ion binding

endoplasmic reticulum

Golgi apparatus

L-phenylalanine catabolic process

tyrosine catabolic process

aromatic amino acid family metabolic process

oxidoreductase activity

metal ion binding

oxidation reduction

Ubiquinone and other terpenoid-quinone biosynthesis

Tyrosine metabolism

Phenylalanine metabolism

Metabolic pathways

238722_x_at 0.295 5.906 2.343 3.314e-02 0.502 -3.688 NAPEPLD N-acyl phosphatidylethanolamine phospholipase D 7 -102527258 AI460037 7q22.1 Hs.324271 5

lipid metabolic process

zinc ion binding

phospholipid catabolic process

membrane

hydrolase activity

metal ion binding

 
1569332_at -0.243 2.853 -2.342 3.317e-02 0.502 -3.689 C3orf66 chromosome 3 open reading frame 66 3 110379701 BC022563 3q13.13 Hs.618669 2    
1553959_a_at 0.284 6.229 2.342 3.320e-02 0.502 -3.690 B3GALT6 UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6 1 1157491 N95564 1p36.33 Hs.284284 4

Golgi apparatus

Golgi medial cisterna

glycosaminoglycan biosynthetic process

protein amino acid glycosylation

UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity

membrane

integral to membrane

transferase activity, transferring glycosyl groups

manganese ion binding

galactosylxylosylprotein 3-beta-galactosyltransferase activity

Chondroitin sulfate biosynthesis

Heparan sulfate biosynthesis

Metabolic pathways

1560002_at -0.358 4.124 -2.341 3.322e-02 0.502 -3.690 LOC100132859 similar to Protein FAM27D1 9   BI917658 9q13        
205521_at 0.372 5.928 2.341 3.322e-02 0.502 -3.690 EXOG endo/exonuclease (5'-3'), endonuclease G-like 3 38512766 BF511976 3p21.3 Hs.517897 6

nucleic acid binding

endonuclease activity

cellular_component

mitochondrion

mitochondrial inner membrane

biological_process

membrane

hydrolase activity

metal ion binding

Apoptosis

227176_at -0.256 5.049 -2.341 3.323e-02 0.502 -3.690 SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 12 -38435091 AL565362 12q12 Hs.558595 5

transporter activity

membrane

integral to membrane

substrate-specific transmembrane transporter activity

transmembrane transport

 
221875_x_at 0.353 8.396 2.341 3.324e-02 0.502 -3.691 HLA-F major histocompatibility complex, class I, F 6 29799095, 29799095, 1143812, 1143812, 945922, 945922 AW514210 6p21.3 Hs.519972 68

antigen processing and presentation of peptide antigen via MHC class I

immune response

membrane

integral to membrane

antigen processing and presentation

MHC class I receptor activity

MHC class I protein complex

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

229245_at 0.336 4.256 2.341 3.324e-02 0.502 -3.691 PLEKHA6 pleckstrin homology domain containing, family A member 6 1 -202454603 AA535361 1q32.1 Hs.253146 9    
229378_at 0.198 3.502 2.341 3.325e-02 0.502 -3.691 STOX1 storkhead box 1 10 70257299, 70257299, 70257568 N53051 10q21.3-q22.1 Hs.37636 9

DNA binding

nucleus

nucleolus

cytoplasm

 
203540_at 0.254 3.306 2.341 3.325e-02 0.502 -3.691 GFAP glial fibrillary acidic protein 17 -40342566, -40338518 NM_002055 17q21 Hs.514227 110

structural constituent of cytoskeleton

protein binding

cytoplasm

intermediate filament

 
41644_at 0.300 7.141 2.341 3.326e-02 0.502 -3.691 SASH1 SAM and SH3 domain containing 1 6 148705421 AB018333 6q24.3 Hs.193133 12

protein binding

 
209364_at -0.203 7.108 -2.341 3.328e-02 0.502 -3.692 BAD BCL2-associated agonist of cell death 11 -63793876 U66879 11q13.1 Hs.370254 130

protein binding

protein binding

cytoplasm

mitochondrion

mitochondrial outer membrane

mitochondrial outer membrane

cytosol

induction of apoptosis

activation of pro-apoptotic gene products

membrane

ErbB signaling pathway

Apoptosis

VEGF signaling pathway

Focal adhesion

Neurotrophin signaling pathway

Insulin signaling pathway

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

Pathways in cancer

Colorectal cancer

Pancreatic cancer

Endometrial cancer

Prostate cancer

Melanoma

Chronic myeloid leukemia

Acute myeloid leukemia

Non-small cell lung cancer

238635_at 0.215 2.314 2.340 3.334e-02 0.503 -3.693 C5orf28 chromosome 5 open reading frame 28 5 -43480110 W72333 5p12 Hs.558531 5

membrane

integral to membrane

 
36830_at -0.426 6.161 -2.339 3.334e-02 0.503 -3.694 MIPEP mitochondrial intermediate peptidase 13 -23202327 U80034 13q12 Hs.507498 6

magnesium ion binding

metalloendopeptidase activity

iron ion binding

calcium ion binding

mitochondrion

mitochondrial matrix

proteolysis

mitochondrial protein processing during import

peptidase activity

zinc ion binding

manganese ion binding

cobalt ion binding

 
221215_s_at 0.206 5.756 2.339 3.337e-02 0.503 -3.694 RIPK4 receptor-interacting serine-threonine kinase 4 21 -42032597 NM_020639 21q22.3 Hs.517310 13

nucleotide binding

protein serine/threonine kinase activity

receptor activity

ATP binding

cytoplasm

protein amino acid phosphorylation

membrane

transferase activity

 
1569867_at 0.213 4.098 2.339 3.337e-02 0.503 -3.694 EME2 essential meiotic endonuclease 1 homolog 2 (S. pombe) 16 1763229 BC041011 16p13.3 Hs.7247 4

DNA binding

endonuclease activity

protein binding

nucleus

DNA repair

DNA recombination

response to DNA damage stimulus

hydrolase activity

 
227239_at -0.533 8.467 -2.339 3.340e-02 0.503 -3.695 FAM126A family with sequence similarity 126, member A 7 -22947402 AV734839 7p15.3 Hs.85603 9

signal transducer activity

cellular_component

cytoplasm

biological_process

membrane

 
213444_at 0.244 5.652 2.338 3.343e-02 0.503 -3.696 ZNF862 zinc finger protein 862 7 149166441 AB011115 7q36.1 Hs.301277 4

nucleic acid binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

protein dimerization activity

 
219868_s_at -0.175 4.908 -2.338 3.343e-02 0.503 -3.696 ANKFY1 ankyrin repeat and FYVE domain containing 1 17 -4044521, -4013413 NM_016376 17p13.3 Hs.696087 11

protein binding

cytoplasm

endosome

zinc ion binding

endosome membrane

membrane

metal ion binding

 
218554_s_at -0.220 5.132 -2.337 3.348e-02 0.504 -3.697 ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 1 -153571675 NM_018489 1q22 Hs.491060 10

DNA binding

RNA polymerase II transcription factor activity

protein binding

nucleus

tight junction

DNA packaging

transcription from RNA polymerase II promoter

cell-cell signaling

methyltransferase activity

zinc ion binding

chromatin modification

transferase activity

histone-lysine N-methyltransferase activity

cell junction

regulation of transcription

metal ion binding

Lysine degradation

Tight junction

223518_at 0.210 5.792 2.337 3.354e-02 0.505 -3.698 DFFA DNA fragmentation factor, 45kDa, alpha polypeptide 1 -10443189 AF087573 1p36.3-p36.2 Hs.484782 44

caspase-activated deoxyribonuclease activity

intracellular

nucleus

nucleoplasm

cytoplasm

cytosol

DNA fragmentation involved in apoptosis

intracellular signaling cascade

identical protein binding

negative regulation of apoptosis

Apoptosis

228937_at 0.688 3.778 2.335 3.365e-02 0.506 -3.702 C13orf31 chromosome 13 open reading frame 31 13 43351419, 43351968 AI659800 13q14.11 Hs.210586 5    
206356_s_at -0.446 5.119 -2.335 3.366e-02 0.506 -3.702 GNAL guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type 18 11679135, 11741561 NM_002071 18p11.22-p11.21 Hs.136295 16

nucleotide binding

GTPase activity

signal transducer activity

GTP binding

signal transduction

G-protein coupled receptor protein signaling pathway

guanyl nucleotide binding

Calcium signaling pathway

Olfactory transduction

224719_s_at 0.314 9.100 2.335 3.367e-02 0.506 -3.702 C12orf57 chromosome 12 open reading frame 57 12 6923463 BG339653 12p13.31 Hs.405913 Hs.591045 5    
219600_s_at -0.588 6.912 -2.334 3.370e-02 0.506 -3.703 TMEM50B transmembrane protein 50B 21 -33743317 NM_006134 21q22.11 Hs.433668 8

molecular_function

endoplasmic reticulum

plasma membrane

biological_process

integral to membrane

 
226597_at -0.315 4.171 -2.334 3.371e-02 0.506 -3.703 REEP6 receptor accessory protein 6 19 1442164 AI348159 19p13.3 Hs.76277 6

membrane

integral to membrane

 
232523_at -0.694 6.578 -2.334 3.371e-02 0.506 -3.703 MEGF10 multiple EGF-like-domains 10 5 126654354 AU144892 5q33 Hs.438709 9

protein binding

plasma membrane

phagocytosis

cell adhesion

integral to membrane

 
204285_s_at -0.458 4.893 -2.334 3.373e-02 0.506 -3.703 PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 18 55718171 AI857639 18q21.32 Hs.96 36

release of cytochrome c from mitochondria

protein binding

mitochondrion

induction of apoptosis

activation of caspase activity

cell structure disassembly during apoptosis

virus-infected cell apoptosis

response to dsRNA

p53 signaling pathway

1556113_at -0.218 5.615 -2.333 3.374e-02 0.506 -3.704 DKFZp451A211 DKFZp451A211 protein 13   BC036906 13q34 Hs.646609 1    
214006_s_at 0.228 6.676 2.333 3.376e-02 0.506 -3.704 GGCX gamma-glutamyl carboxylase 2 -85629703 BE326952 2p12 Hs.77719 53

membrane fraction

endoplasmic reticulum

protein modification process

blood coagulation

gamma-glutamyl carboxylase activity

membrane

integral to membrane

ligase activity

peptidyl-glutamic acid carboxylation

 
229730_at -0.498 9.352 -2.333 3.377e-02 0.506 -3.705 SMTNL2 smoothelin-like 2 17 4434024, 4434582 AI193973 17p13.2 Hs.441709 2    
209797_at 0.247 7.507 2.333 3.377e-02 0.506 -3.705 CNPY2 canopy 2 homolog (zebrafish) 12 -54990483 BC001027 12q15 Hs.8752 7

protein binding

endoplasmic reticulum

integral to plasma membrane

 
210296_s_at -0.294 8.183 -2.333 3.379e-02 0.506 -3.705 PXMP3 peroxisomal membrane protein 3, 35kDa 8 -78055048 BC005375 8q21.1 Hs.437966 Hs.703022 19

neuron migration

protein binding

peroxisome

peroxisomal membrane

integral to peroxisomal membrane

peroxisome organization

nervous system development

zinc ion binding

membrane

integral to membrane

metal ion binding

 
210837_s_at -0.259 2.675 -2.333 3.380e-02 0.506 -3.705 PDE4D phosphodiesterase 4D, cAMP-specific (phosphodiesterase E3 dunce homolog, Drosophila) 5 -58300622, -58300622 AF012074 5q12 Hs.117545 89

3',5'-cyclic-AMP phosphodiesterase activity

soluble fraction

insoluble fraction

cytoplasm

centrosome

cytoskeleton

signal transduction

membrane

hydrolase activity

metal ion binding

Purine metabolism

215424_s_at -0.387 7.230 -2.333 3.380e-02 0.506 -3.705 SNW1 SNW domain containing 1 14 -77253696 AV689564 14q24.3 Hs.445498 32

nuclear mRNA splicing, via spliceosome

transcription coactivator activity

Notch binding

protein binding

nucleus

spliceosomal complex

nucleolus

regulation of transcription from RNA polymerase II promoter

RNA splicing

negative regulation of transcription

Notch signaling pathway

202212_at -0.170 6.664 -2.332 3.381e-02 0.506 -3.705 PES1 pescadillo homolog 1, containing BRCT domain (zebrafish) 22 -29302611 NM_014303 22q12.1 Hs.517543 20

maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

protein binding

intracellular

nucleus

nucleoplasm

nucleolus

rRNA processing

cell proliferation

cell proliferation

preribosome, large subunit precursor

ribosomal large subunit biogenesis

regulation of cell cycle

PeBoW complex

 
207108_s_at -0.221 4.947 -2.332 3.384e-02 0.506 -3.706 NIPBL Nipped-B homolog (Drosophila) 5 36912617 NM_015384 5p13.2 Hs.481927 22

protein binding

nucleus

cell cycle

cohesin loading complex

maintenance of mitotic sister chromatid cohesion

 
221324_at 0.248 4.409 2.332 3.384e-02 0.506 -3.706 TAS2R1 taste receptor, type 2, member 1 5 -9682108 NM_019599 5p15 Hs.567492 12

receptor activity

signal transduction

G-protein coupled receptor protein signaling pathway

chemosensory behavior

taste receptor activity

membrane

integral to membrane

response to stimulus

sensory perception of taste

Taste transduction

207817_at -0.216 3.208 -2.332 3.384e-02 0.506 -3.706 IFNW1 interferon, omega 1 9 -21130630 NM_002177 9p22 Hs.73010 14

cytokine activity

cytokine receptor binding

extracellular region

extracellular space

defense response

cell cycle arrest

response to virus

Cytokine-cytokine receptor interaction

RIG-I-like receptor signaling pathway

Jak-STAT signaling pathway

1559060_a_at -0.466 5.104 -2.332 3.386e-02 0.506 -3.707 FNIP1 folliculin interacting protein 1 5 -131005305 BF677986 5q23.3 Hs.591273 4

cytoplasm

 
224726_at 0.233 7.604 2.332 3.386e-02 0.506 -3.707 MIB1 mindbomb homolog 1 (Drosophila) 18 17575542 W80418 18q11.2 Hs.140903 Hs.658808 15

blood vessel development

in utero embryonic development

somitogenesis

neural tube formation

heart looping

ubiquitin-protein ligase activity

protein binding

cytoplasm

plasma membrane

Notch signaling pathway

heart development

zinc ion binding

protein ubiquitination

ligase activity

modification-dependent protein catabolic process

cytoplasmic vesicle

negative regulation of neuron differentiation

positive regulation of endocytosis

metal ion binding

 
230136_at 0.498 5.281 2.332 3.387e-02 0.506 -3.707 LOC400099 hypothetical LOC400099 13   AI573252 13q12.11 Hs.400432      
221954_at -0.387 7.321 -2.331 3.389e-02 0.506 -3.708 C20orf111 chromosome 20 open reading frame 111 20 -42258549 AA160474 20q13.11 Hs.75798 6    
225376_at 0.192 6.726 2.331 3.391e-02 0.506 -3.708 C20orf11 chromosome 20 open reading frame 11 20 61039885 BG480592 20q13.33 Hs.353013 7

protein binding

nucleus

 
201662_s_at -0.404 7.577 -2.331 3.392e-02 0.506 -3.708 ACSL3 acyl-CoA synthetase long-chain family member 3 2 223433975 D89053 2q34-q35 Hs.655772 20

nucleotide binding

magnesium ion binding

fatty-acyl-CoA synthase activity

long-chain-fatty-acid-CoA ligase activity

protein binding

ATP binding

mitochondrion

mitochondrial outer membrane

peroxisome

endoplasmic reticulum

microsome

lipid metabolic process

fatty acid metabolic process

metabolic process

membrane

integral to membrane

ligase activity

Fatty acid metabolism

Metabolic pathways

PPAR signaling pathway

Adipocytokine signaling pathway

217286_s_at 0.212 7.975 2.330 3.394e-02 0.507 -3.709 NDRG3 NDRG family member 3 20 -34713582 BC001805 20q11.21-q11.23 Hs.437338 9

molecular_function

cytoplasm

spermatogenesis

cell differentiation

negative regulation of cell growth

 
224318_s_at -0.354 8.751 -2.330 3.395e-02 0.507 -3.709 KIAA1310 KIAA1310 2 -96622633 AF311326 2p12-p11.2 Hs.516341 10    
222439_s_at -0.438 7.555 -2.330 3.397e-02 0.507 -3.710 THRAP3 thyroid hormone receptor associated protein 3 1 36462603 BE967048 1p34.3 Hs.160211 21

nucleotide binding

receptor activity

protein binding

ATP binding

nucleus

nucleolus

transcription initiation from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

ligand-dependent nuclear receptor transcription coactivator activity

androgen receptor signaling pathway

vitamin D receptor binding

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

thyroid hormone receptor binding

 
231966_at -0.239 4.126 -2.330 3.400e-02 0.507 -3.710 PPP1R9A protein phosphatase 1, regulatory (inhibitor) subunit 9A 7 94374884 AB033048 7q21.3 Hs.21816 12

actin binding

protein binding

cytoplasm

cytoskeleton

actin filament organization

multicellular organismal development

nervous system development

synaptosome

cell junction

cell differentiation

filopodium

cortical actin cytoskeleton

dendritic spine

synapse

 
221629_x_at 0.237 6.634 2.329 3.402e-02 0.507 -3.711 C8orf30A chromosome 8 open reading frame 30A 8 145264659, 145408687 AF151022 8q24.3 Hs.300224 5

binding

cellular_component

biological_process

 
216682_s_at 0.205 3.200 2.329 3.403e-02 0.507 -3.711 FAM48A family with sequence similarity 48, member A 13 -36481450 AK021457 13q13.3 Hs.435815 14

protein binding

multicellular organismal development

gastrulation

 
221255_s_at 0.187 9.635 2.329 3.404e-02 0.507 -3.712 TMEM93 transmembrane protein 93 17 3518838 NM_031298 17p13.2 Hs.30011 3

membrane

integral to membrane

 
209177_at 0.272 8.781 2.329 3.405e-02 0.507 -3.712 NDUFAF3 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3 3 49032911, 49033621, 49034077 BC002873 3p21.31 Hs.31387 8

protein binding

nucleus

mitochondrial inner membrane

mitochondrial respiratory chain complex I assembly

 
220603_s_at 0.219 2.871 2.329 3.406e-02 0.507 -3.712 MCTP2 multiple C2 domains, transmembrane 2 15 92642433, 92700167 NM_018349 15q26.2 Hs.33368 Hs.592017 7

calcium ion binding

calcium-dependent phospholipid binding

membrane fraction

membrane

integral to membrane

calcium-mediated signaling

 
212796_s_at 0.241 6.174 2.328 3.407e-02 0.507 -3.712 TBC1D2B TBC1 domain family, member 2B 15 -76074381 BF195608 15q24.3-q25.1 Hs.719242 2

GTPase activator activity

Rab GTPase activator activity

intracellular

regulation of Rab GTPase activity

 
236321_at 0.312 5.266 2.328 3.407e-02 0.507 -3.712 LOC285550 hypothetical protein LOC285550 4 15292449 AW439843 4p15.32 Hs.399980 Hs.619367 3    
212333_at -0.295 8.992 -2.328 3.412e-02 0.507 -3.713 FAM98A family with sequence similarity 98, member A 2 -33662232 AL049943 2p22.3 Hs.468140 2    
211251_x_at -0.183 7.421 -2.327 3.414e-02 0.507 -3.714 NFYC nuclear transcription factor Y, gamma 1 40929828, 40930266 U78774 1p32 Hs.233458 Hs.713051 24

transcription factor activity

RNA polymerase II transcription factor activity

transcription coactivator activity

protein binding

intracellular

nucleus

regulation of transcription from RNA polymerase II promoter

protein folding

CCAAT-binding factor complex

sequence-specific DNA binding

Antigen processing and presentation

222550_at -0.230 8.687 -2.327 3.415e-02 0.507 -3.714 ARMC1 armadillo repeat containing 1 8 -66677627 AK024053 8q13.1 Hs.269542 3

binding

metal ion transport

metal ion binding

 
210122_at -0.220 3.382 -2.327 3.415e-02 0.507 -3.714 PRM2 protamine 2 16 -11276993 BC005303 16p13.2 Hs.2324 36

nucleosome

DNA binding

nucleus

nucleoplasm

chromosome

nucleus organization

multicellular organismal development

spermatogenesis

spermatid development

cell differentiation

chromosome condensation

 
238825_at 0.384 5.205 2.327 3.417e-02 0.507 -3.715 ACRC acidic repeat containing X 70714598 AI091533 Xq13.1 Hs.135167 3

nucleus

 
222279_at 0.243 4.999 2.327 3.418e-02 0.507 -3.715 RP3-377H14.5 hypothetical LOC285830 6 -29802356, -1147069, -949185 AI669379 6p22.1 Hs.646985 2    
228214_at -0.486 7.401 -2.327 3.418e-02 0.507 -3.715 SOX6 SRY (sex determining region Y)-box 6 11 -15944571, -15944571, -15944571 AW242286 11p15.3 Hs.368226 24

transcription factor activity

nucleus

chromatin organization

regulation of transcription, DNA-dependent

multicellular organismal development

muscle organ development

 
1565660_at 0.269 5.656 2.326 3.420e-02 0.507 -3.716 FUT6 fucosyltransferase 6 (alpha (1,3) fucosyltransferase) 19 -5781636 BC040472 19p13.3 Hs.631846 Hs.705615 19

Golgi apparatus

protein amino acid glycosylation

membrane

integral to membrane

transferase activity, transferring glycosyl groups

3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase activity

L-fucose catabolic process

alpha(1,3)-fucosyltransferase activity

Glycosphingolipid biosynthesis - lacto and neolacto series

Metabolic pathways

227892_at 0.576 9.418 2.326 3.420e-02 0.507 -3.716 PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit 1 56883577 AA855042 1p31 Hs.437039 67

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

nucleoplasm

cytosol

protein amino acid phosphorylation

fatty acid biosynthetic process

cholesterol biosynthetic process

signal transduction

transferase activity

regulation of fatty acid oxidation

Regulation of autophagy

mTOR signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

Hypertrophic cardiomyopathy (HCM)

201631_s_at -0.379 6.178 -2.326 3.422e-02 0.507 -3.716 IER3 immediate early response 3 6 -30818954, -2159551, -1957851 NM_003897 6p21.3 Hs.591785 37

protein binding

apoptosis

anti-apoptosis

anatomical structure morphogenesis

membrane

integral to membrane

 
213389_at -0.275 6.844 -2.326 3.422e-02 0.507 -3.716 ZNF592 zinc finger protein 592 15 83092821 BF508616 15q25.3 Hs.79347 7

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
212833_at -0.354 8.755 -2.326 3.424e-02 0.507 -3.716 SLC25A46 solute carrier family 25, member 46 5 110102652 M74089 5q22.1 Hs.75639 5

binding

cellular_component

mitochondrion

mitochondrial inner membrane

transport

biological_process

membrane

integral to membrane

 
1560276_at 0.463 7.318 2.326 3.424e-02 0.507 -3.716 LOC283403 hypothetical protein LOC283403 12   BC038743 12q13.13 Hs.667179 1    
207251_at -0.212 3.440 -2.326 3.425e-02 0.507 -3.717 MEP1B meprin A, beta 18 28023984 NM_005925 18q12.2-q12.3 Hs.194777 18

metalloendopeptidase activity

extracellular space

membrane fraction

plasma membrane

integral to plasma membrane

proteolysis

digestion

peptidase activity

zinc ion binding

metal ion binding

 
205315_s_at 0.346 6.611 2.325 3.427e-02 0.508 -3.717 SNTB2 syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2) 16 67778550 NM_006750 16q22-q23 Hs.461117 22

actin binding

calcium ion binding

calmodulin binding

membrane fraction

cytoplasm

cytoskeleton

microtubule

dystrophin-associated glycoprotein complex

membrane

cell junction

cytoplasmic vesicle

synapse

 
227944_at 0.367 6.249 2.325 3.431e-02 0.508 -3.718 PTPN3 protein tyrosine phosphatase, non-receptor type 3 9 -111177794, -111177794, -111177794, -111177794 BF437260 9q31 Hs.436429 20

protein tyrosine phosphatase activity

cytoplasm

cytoskeleton

plasma membrane

protein amino acid dephosphorylation

cytoskeletal protein binding

hydrolase activity

extrinsic to membrane

negative regulation of membrane protein ectodomain proteolysis

 
213056_at 0.302 3.725 2.325 3.432e-02 0.508 -3.718 FRMD4B FERM domain containing 4B 3 -69301835 AU145019 3p14.1 Hs.709671 5

binding

cytoplasm

cytoskeleton

 
236436_at -0.344 5.710 -2.325 3.432e-02 0.508 -3.718 SLC25A45 solute carrier family 25, member 45 11 -64899238 AI336233 11q13.1 Hs.661604 4

binding

mitochondrion

mitochondrial inner membrane

transport

membrane

integral to membrane

 
233409_at 0.182 5.523 2.325 3.432e-02 0.508 -3.718 RHBDL3 rhomboid, veinlet-like 3 (Drosophila) 17 27617307 AL133573 17q11.2 Hs.655027 3

serine-type endopeptidase activity

calcium ion binding

signal transduction

peptidase activity

membrane

integral to membrane

 
212388_at -0.489 7.751 -2.324 3.435e-02 0.508 -3.719 USP24 ubiquitin specific peptidase 24 1 -55304619 AB028980 1p32.3 Hs.477009 13

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
213588_x_at -0.196 12.014 -2.324 3.435e-02 0.508 -3.719 RPL14 ribosomal protein L14 3 40473804, 40473833 AA838274 3p22-p21.2 Hs.719095 21

RNA binding

structural constituent of ribosome

protein binding

intracellular

cytoplasm

cytosol

ribosome

rRNA processing

translational elongation

cytosolic large ribosomal subunit

ribosomal large subunit biogenesis

Ribosome

242176_at -0.235 5.443 -2.324 3.436e-02 0.508 -3.720 MEF2A myocyte enhancer factor 2A 15 97923655, 97990705 AA491228 15q26 Hs.268675 77

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

apoptosis

multicellular organismal development

nervous system development

muscle organ development

cell differentiation

sequence-specific DNA binding

 
206580_s_at 0.285 6.882 2.324 3.437e-02 0.508 -3.720 EFEMP2 EGF-containing fibulin-like extracellular matrix protein 2 11 -65390487 NM_016938 11q13.1 Hs.170622 15

transmembrane receptor activity

extracellular matrix structural constituent

calcium ion binding

protein binding

extracellular region

basement membrane

blood coagulation

membrane

 
208057_s_at -0.193 6.365 -2.324 3.437e-02 0.508 -3.720 GLI2 GLI family zinc finger 2 2 121271336 D14827 2q14 Hs.111867 35

negative regulation of transcription from RNA polymerase II promoter

skeletal system development

kidney development

osteoblast development

transcription factor activity

intracellular

nucleus

smoothened signaling pathway

pattern specification process

axon guidance

hindgut morphogenesis

heart development

zinc ion binding

cell proliferation

proximal/distal pattern formation

transcription activator activity

floor plate formation

spinal cord dorsal/ventral patterning

ventral spinal cord development

cerebellar cortex morphogenesis

smoothened signaling pathway involved in ventral spinal cord interneuron specification

spinal cord ventral commissure morphogenesis

pituitary gland development

lung development

mammary gland development

hindbrain development

notochord development

tube development

odontogenesis of dentine-containing tooth

sequence-specific DNA binding

regulation of transcription

positive regulation of DNA replication

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

embryonic gut development

developmental growth

neuron development

branching morphogenesis of a tube

Hedgehog signaling pathway

Pathways in cancer

Basal cell carcinoma

223743_s_at 0.427 7.087 2.323 3.440e-02 0.508 -3.721 MRPL4 mitochondrial ribosomal protein L4 19 10223639, 10223639 BC000756 19p13.2 Hs.279652 10

structural constituent of ribosome

intracellular

mitochondrion

ribosome

translation

 
212124_at 0.331 7.734 2.323 3.441e-02 0.508 -3.721 ZMIZ1 zinc finger, MIZ-type containing 1 10 80498797 AF070622 10q22.3 Hs.193118 14

vasculogenesis

in utero embryonic development

heart morphogenesis

protein binding

nucleus

cytoplasm

vitellogenesis

cell aging

zinc ion binding

nuclear speck

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

positive regulation of fibroblast proliferation

developmental growth

artery morphogenesis

 
224053_s_at -0.201 5.403 -2.323 3.446e-02 0.508 -3.722 SLC4A9 solute carrier family 4, sodium bicarbonate cotransporter, member 9 5 139719970 AF336237 5q31 Hs.550313 3

transporter activity

inorganic anion exchanger activity

anion transport

anion transmembrane transporter activity

antiporter activity

membrane

integral to membrane

apical part of cell

 
216347_s_at 0.214 6.265 2.322 3.447e-02 0.508 -3.722 PPP1R13B protein phosphatase 1, regulatory (inhibitor) subunit 13B 14 -103269840 AK023188 14q32.33 Hs.709297 13

protein binding

nucleus

cytoplasm

apoptosis

induction of apoptosis

negative regulation of cell cycle

 
206188_at 0.242 4.039 2.322 3.451e-02 0.508 -3.723 ZNF623 zinc finger protein 623 8 144789515, 144803096 NM_014789 8q24.3 Hs.43133 Hs.694018 4

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
202539_s_at -0.372 5.336 -2.321 3.453e-02 0.508 -3.724 HMGCR 3-hydroxy-3-methylglutaryl-Coenzyme A reductase 5 74668748 AL518627 5q13.3-q14 Hs.643495 Hs.698445 Hs.713530 72

hydroxymethylglutaryl-CoA reductase (NADPH) activity

peroxisome

endoplasmic reticulum

endoplasmic reticulum membrane

endoplasmic reticulum membrane

cholesterol biosynthetic process

isoprenoid biosynthetic process

germ cell migration

gonad development

coenzyme A metabolic process

membrane

integral to membrane

oxidoreductase activity

NADP or NADPH binding

oxidation reduction

Terpenoid backbone biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

215978_x_at 0.233 9.064 2.321 3.454e-02 0.508 -3.724 LOC152719 hypothetical protein LOC152719 4   AK021514 4p16.3 Hs.428360 1    
217405_x_at 0.267 3.967 2.321 3.457e-02 0.508 -3.725 GPLD1 glycosylphosphatidylinositol specific phospholipase D1 6 -24581304, -24536383 AL031230 6p22.3-p22.2 Hs.533291 26

glycosylphosphatidylinositol phospholipase D activity

extracellular region

hydrolase activity

Glycosylphosphatidylinositol(GPI)-anchor biosynthesis

211323_s_at 0.334 4.727 2.321 3.458e-02 0.508 -3.725 ITPR1 inositol 1,4,5-triphosphate receptor, type 1 3 4510033 L38019 3p26-p25 Hs.567295 Hs.715765 87

response to hypoxia

ion channel activity

inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity

calcium channel activity

calcium channel activity

calcium ion binding

protein binding

endoplasmic reticulum

ion transport

calcium ion transport

signal transduction

cell death

calcium ion transmembrane transporter activity

membrane

integral to membrane

platelet dense granule membrane

platelet dense tubular network membrane

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Gap junction

Long-term potentiation

Long-term depression

GnRH signaling pathway

Alzheimer's disease

Huntington's disease

203390_s_at 0.292 4.767 2.320 3.462e-02 0.508 -3.726 KIF3C kinesin family member 3C 2 -26002958 NM_002254 2p23 Hs.21611 9

nucleotide binding

microtubule motor activity

ATP binding

kinesin complex

microtubule

microtubule-based movement

 
218987_at 0.376 6.961 2.320 3.462e-02 0.508 -3.726 ATF7IP activating transcription factor 7 interacting protein 12 14409877 NM_018179 12p13.1 Hs.714407 17

negative regulation of transcription from RNA polymerase II promoter

transcription corepressor activity

protein binding

nucleus

transcription factor complex

cytoplasm

DNA methylation

ATPase activity

interspecies interaction between organisms

regulation of transcription

positive regulation of transcription, DNA-dependent

regulation of transcriptional preinitiation complex assembly

 
228622_s_at 0.245 7.183 2.320 3.462e-02 0.508 -3.726 DNAJC4 DnaJ (Hsp40) homolog, subfamily C, member 4 11 63754328 AW071239 11q13 Hs.172847 4

membrane fraction

protein folding

response to unfolded protein

membrane

integral to membrane

heat shock protein binding

unfolded protein binding

 
203400_s_at 0.238 3.055 2.320 3.463e-02 0.508 -3.726 TF transferrin 3 134947924 NM_001063 3q22.1 Hs.518267 163

response to hypoxia

protein binding

extracellular region

basement membrane

extracellular space

early endosome

late endosome

ion transport

cellular iron ion homeostasis

acute-phase response

ferric iron binding

basal plasma membrane

response to organic cyclic substance

ferric iron transmembrane transporter activity

ferric iron transport

endocytic vesicle

positive regulation of myelination

metal ion binding

perinuclear region of cytoplasm

recycling endosome

 
212969_x_at 0.248 5.102 2.320 3.463e-02 0.508 -3.726 EML3 echinoderm microtubule associated protein like 3 11 -62126266 BE222618 11q12.3 Hs.379785 8

protein binding

cytoplasm

microtubule

 
200912_s_at -0.223 12.291 -2.320 3.463e-02 0.508 -3.726 EIF4A2 eukaryotic translation initiation factor 4A, isoform 2 3 187984054 NM_001967 3q28 Hs.518475 Hs.599481 15

nucleotide binding

RNA binding

translation initiation factor activity

helicase activity

protein binding

ATP binding

cytosol

translation

regulation of translational initiation

ATP-dependent helicase activity

eukaryotic translation initiation factor 4F complex

hydrolase activity

interspecies interaction between organisms

 
232686_at 0.285 3.515 2.320 3.463e-02 0.508 -3.726 SIGLECP3 sialic acid binding Ig-like lectin, pseudogene 3 19 56362396 AI801574 19q13.3 Hs.132045 3    
225268_at -0.347 10.637 -2.320 3.464e-02 0.508 -3.727 KPNA4 karyopherin alpha 4 (importin alpha 3) 3 -161700655 AU144710 3q25.33 Hs.715552 53

protein binding

nucleus

nuclear pore

cytoplasm

NLS-bearing substrate import into nucleus

intracellular protein transport

protein transporter activity

 
1554396_at 0.268 5.094 2.320 3.464e-02 0.508 -3.727 UEVLD UEV and lactate/malate dehyrogenase domains 11 -18509819 BC011011 11p15.1 Hs.407991 5

binding

glycolysis

metabolic process

protein transport

oxidoreductase activity

oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

small conjugating protein ligase activity

modification-dependent protein catabolic process

post-translational protein modification

cellular carbohydrate metabolic process

regulation of protein metabolic process

 
227220_at 0.240 5.103 2.320 3.465e-02 0.508 -3.727 NFXL1 nuclear transcription factor, X-box binding-like 1 4 -47544013 AI743731 4p12 Hs.646325 6

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

membrane

integral to membrane

metal ion binding

 
244345_at 0.207 2.913 2.320 3.467e-02 0.508 -3.727 CADM1 cell adhesion molecule 1 11 -114549554 AI627453 11q23.2 Hs.370510 50

T cell mediated cytotoxicity

receptor binding

receptor binding

plasma membrane

cell-cell junction

apoptosis

immune response

cell adhesion

homophilic cell adhesion

heterophilic cell adhesion

multicellular organismal development

spermatogenesis

protein C-terminus binding

cell recognition

cell recognition

integral to membrane

basolateral plasma membrane

cell differentiation

PDZ domain binding

susceptibility to natural killer cell mediated cytotoxicity

susceptibility to natural killer cell mediated cytotoxicity

protein homodimerization activity

positive regulation of cytokine secretion

activated T cell proliferation

detection of stimulus

detection of stimulus

Cell adhesion molecules (CAMs)

229577_at 0.225 5.122 2.319 3.469e-02 0.508 -3.728 AGPAT6 1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta) 8 41554863 AI742085 8p11.21 Hs.355753 7

glandular epithelial cell maturation

1-acylglycerol-3-phosphate O-acyltransferase activity

glycerol-3-phosphate O-acyltransferase activity

membrane fraction

endoplasmic reticulum

endoplasmic reticulum

acyl-CoA metabolic process

phosphatidylcholine biosynthetic process

lactation

metabolic process

acyltransferase activity

phospholipid biosynthetic process

membrane

integral to membrane

transferase activity

triglyceride biosynthetic process

triglyceride biosynthetic process

regulation of multicellular organism growth

diacylglycerol metabolic process

Glycerolipid metabolism

Glycerophospholipid metabolism

Ether lipid metabolism

Metabolic pathways

213851_at -0.558 7.019 -2.319 3.469e-02 0.508 -3.728 TMEM110 transmembrane protein 110 3 -52848937 BG031677 3p21.1 Hs.705605 2

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
228810_at -0.361 5.632 -2.319 3.471e-02 0.509 -3.728 CCNYL1 cyclin Y-like 1 2 208284508 AW135279 2q33.3 Hs.471234 Hs.597952 5    
203387_s_at -0.487 8.548 -2.318 3.476e-02 0.509 -3.730 TBC1D4 TBC1 domain family, member 4 13 -74756809 NM_014832 13q22.2 Hs.210891 26

GTPase activator activity

Rab GTPase activator activity

intracellular

cytoplasm

regulation of Rab GTPase activity

 
202098_s_at 0.260 6.417 2.318 3.477e-02 0.509 -3.730 PRMT2 protein arginine methyltransferase 2 21 46879954 NM_001535 21q22.3 Hs.154163 17

signal transducer activity

nucleus

protein amino acid methylation

signal transduction

methyltransferase activity

transferase activity

identical protein binding

 
200761_s_at -0.304 10.622 -2.318 3.478e-02 0.509 -3.730 ARL6IP5 ADP-ribosylation-like factor 6 interacting protein 5 3 69216779 NM_006407 3p14 Hs.518060 Hs.716493 30

protein binding

cytoplasm

endoplasmic reticulum

L-glutamate transport

membrane

integral to membrane

 
36711_at -2.468 5.879 -2.318 3.479e-02 0.509 -3.730 MAFF v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian) 22 36927884, 36928972 AL021977 22q13.1 Hs.517617 14

in utero embryonic development

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

response to stress

parturition

sequence-specific DNA binding

regulation of epidermal cell differentiation

 
232087_at 0.274 4.906 2.318 3.479e-02 0.509 -3.730 CXorf23 chromosome X open reading frame 23 X -19844038 AW628045 Xp22.12 Hs.28896 2

mitochondrion

 
231781_s_at -0.582 9.640 -2.317 3.484e-02 0.509 -3.731 LRRC2 leucine rich repeat containing 2 3 -46531881, -46531881 AK021919 3p21.31 Hs.657345 7

protein binding

 
209106_at -0.302 7.862 -2.317 3.485e-02 0.509 -3.732 NCOA1 nuclear receptor coactivator 1 2 24660849 BF576458 2p23 Hs.596314 123

DNA binding

chromatin binding

transcription coactivator activity

histone acetyltransferase activity

signal transducer activity

nucleus

signal transduction

acyltransferase activity

transferase activity

androgen receptor signaling pathway

transcription regulator activity

nuclear hormone receptor binding

positive regulation of transcription from RNA polymerase II promoter

protein N-terminus binding

androgen receptor binding

 
205760_s_at 0.217 5.928 2.317 3.485e-02 0.509 -3.732 OGG1 8-oxoguanine DNA glycosylase 3 9766627, 9766627 NM_016821 3p26.2 Hs.380271 243

damaged DNA binding

endonuclease activity

protein binding

nucleus

nucleoplasm

nucleoplasm

mitochondrion

base-excision repair

nucleotide-excision repair

response to DNA damage stimulus

metabolic process

oxidized purine base lesion DNA N-glycosylase activity

oxidized purine base lesion DNA N-glycosylase activity

hydrolase activity, acting on glycosyl bonds

lyase activity

depurination

Base excision repair

219620_x_at -0.318 5.497 -2.317 3.487e-02 0.509 -3.732 C9orf167 chromosome 9 open reading frame 167 9 139292100 NM_017723 9q34.3 Hs.495541 1

nucleotide binding

ATP binding

endoplasmic reticulum

membrane

integral to membrane

nucleoside-triphosphatase activity

chaperone mediated protein folding requiring cofactor

 
212111_at -0.245 6.915 -2.316 3.490e-02 0.510 -3.733 STX12 syntaxin 12 1 27972280 AA628051 1p35-p34.1 Hs.523855 18

SNAP receptor activity

Golgi apparatus

intracellular protein transport

membrane

integral to membrane

vesicle-mediated transport

cholesterol efflux

membrane raft

phagocytic vesicle

protein stabilization

SNARE interactions in vesicular transport

201503_at -0.381 9.351 -2.316 3.491e-02 0.510 -3.733 G3BP1 GTPase activating protein (SH3 domain) binding protein 1 5 151131668 BG500067 5q33.1 Hs.587054 27

nucleotide binding

DNA binding

RNA binding

ATP-dependent DNA helicase activity

ATP-dependent RNA helicase activity

helicase activity

endonuclease activity

protein binding

ATP binding

intracellular

nucleus

cytoplasm

cytosol

plasma membrane

transport

Ras protein signal transduction

hydrolase activity

 
221497_x_at -0.392 7.147 -2.315 3.498e-02 0.510 -3.735 EGLN1 egl nine homolog 1 (C. elegans) 1 -229566120 BC005369 1q42.1 Hs.444450 Hs.710300 42

response to hypoxia

embryonic placenta development

iron ion binding

protein binding

cytosol

heart development

zinc ion binding

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

L-ascorbic acid binding

peptidyl-proline dioxygenase activity

oxygen homeostasis

negative regulation of transcription factor activity

metal ion binding

oxidation reduction

Pathways in cancer

Renal cell carcinoma

204747_at -0.250 6.255 -2.315 3.498e-02 0.510 -3.735 IFIT3 interferon-induced protein with tetratricopeptide repeats 3 10 91077581, 91082218 NM_001549 10q24 Hs.714337 14

binding

cellular_component

biological_process

 
226908_at 0.237 2.841 2.315 3.499e-02 0.510 -3.735 LRIG3 leucine-rich repeats and immunoglobulin-like domains 3 12 -57552204, -57552203 AI627704 12q14.1 Hs.715683 9

protein binding

membrane

integral to membrane

 
1559399_s_at 0.460 4.963 2.315 3.499e-02 0.510 -3.735 ZCCHC10 zinc finger, CCHC domain containing 10 5 -132360575 BC015986 5q31.1 Hs.29700 5

nucleic acid binding

zinc ion binding

metal ion binding

 
223380_s_at -0.374 7.621 -2.314 3.506e-02 0.510 -3.737 LATS2 LATS, large tumor suppressor, homolog 2 (Drosophila) 13 -20445175 AF207547 13q11-q12 Hs.78960 17

G1/S transition of mitotic cell cycle

nucleotide binding

magnesium ion binding

spindle pole

protein serine/threonine kinase activity

ATP binding

nucleus

cytoplasm

centrosome

protein amino acid phosphorylation

cell cycle

mitosis

protein kinase cascade

hormone-mediated signaling

transferase activity

negative regulation of cyclin-dependent protein kinase activity

cell division

 
243027_at 0.229 2.633 2.313 3.508e-02 0.510 -3.737 IGSF5 immunoglobulin superfamily, member 5 21 40039203 AI824021 21q22.2 Hs.422120 3

plasma membrane

tight junction

integral to membrane

cell junction

Tight junction

Epithelial cell signaling in Helicobacter pylori infection

212487_at 0.322 7.068 2.313 3.508e-02 0.510 -3.737 GPATCH8 G patch domain containing 8 17 -39828175 AI673812 17q21.31 Hs.463129 8

molecular_function

cellular_component

biological_process

 
220907_at -0.153 4.761 -2.313 3.508e-02 0.510 -3.737 GPR110 G protein-coupled receptor 110 6 -47095580, -47075771 NM_025048 6p12.3 Hs.256897 11

G-protein coupled receptor activity

G-protein coupled receptor activity

plasma membrane

neuropeptide signaling pathway

integral to membrane

integral to membrane

 
227627_at 0.192 6.360 2.313 3.512e-02 0.511 -3.738 SGK3 serum/glucocorticoid regulated kinase family, member 3 8 67787444, 67850015 AV690866 8q12.3-q13.1 Hs.613417 30

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

early endosome

protein amino acid phosphorylation

response to stress

cell communication

transferase activity

cytoplasmic vesicle

phosphoinositide binding

 
212573_at -0.344 8.451 -2.313 3.513e-02 0.511 -3.739 ENDOD1 endonuclease domain containing 1 11 94462664 AF131747 11q21 Hs.167115 6

nucleic acid binding

endonuclease activity

extracellular region

hydrolase activity

metal ion binding

Apoptosis

220422_at 0.193 2.633 2.313 3.513e-02 0.511 -3.739 UBQLN3 ubiquilin 3 11 -5485105 NM_017481 11p15 Hs.189184 6    
200882_s_at -0.252 9.443 -2.312 3.519e-02 0.511 -3.740 PSMD4 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 1 149493820 NM_002810 1q21.3 Hs.505059 62

proteasome complex

protein binding

cytosol

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

211497_x_at 0.277 4.455 2.311 3.522e-02 0.511 -3.741 NKX3-1 NK3 homeobox 1 8 -23592151 AF249671 8p21 Hs.55999 45

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

sequence-specific DNA binding

Pathways in cancer

Prostate cancer

1555153_s_at -0.265 2.158 -2.311 3.522e-02 0.511 -3.741 FCHO2 FCH domain only 2 5 72287563 BC014311 5q13.2 Hs.719247 11    
209635_at 0.248 5.586 2.311 3.525e-02 0.511 -3.742 AP1S1 adaptor-related protein complex 1, sigma 1 subunit 7 100584405 BC003561 7q22.1 Hs.489365 Hs.718546 26

protein binding

Golgi apparatus

cytosol

coated pit

intracellular protein transport

receptor-mediated endocytosis

protein transporter activity

membrane

membrane coat

AP-1 adaptor complex

cytoplasmic vesicle

Lysosome

230807_at 0.231 4.882 2.311 3.525e-02 0.511 -3.742 CCDC151 coiled-coil domain containing 151 19 -11392271 AI807422 19p13.2 Hs.124010 3    
1555841_at 0.256 6.235 2.311 3.527e-02 0.511 -3.742 C9orf30 chromosome 9 open reading frame 30 9 102229462 BQ014020 9q31.1 Hs.530272 3    
221926_s_at 0.264 5.445 2.310 3.529e-02 0.512 -3.743 IL17RC interleukin 17 receptor C 3 9933763 BF196320 3p25.3 3p25.3-p24.1 Hs.129959 14

receptor activity

plasma membrane

integral to membrane

 
227372_s_at 0.317 4.011 2.310 3.529e-02 0.512 -3.743 BAIAP2L1 BAI1-associated protein 2-like 1 7 -97758903 AA496034 7q21.3-q22.1 Hs.656063 Hs.710371 13

molecular_function

actin binding

cellular_component

signal transduction

cytoskeletal adaptor activity

biological_process

SH3 domain binding

filopodium assembly

 
201724_s_at -0.234 6.968 -2.310 3.531e-02 0.512 -3.743 GALNT1 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) 18 31488530 NM_020474 18q12.1 Hs.514806 26

polypeptide N-acetylgalactosaminyltransferase activity

calcium ion binding

sugar binding

extracellular region

Golgi apparatus

membrane

integral to membrane

transferase activity, transferring glycosyl groups

protein amino acid O-linked glycosylation via serine

protein amino acid O-linked glycosylation via threonine

manganese ion binding

perinuclear region of cytoplasm

O-Glycan biosynthesis

Metabolic pathways

206513_at -0.210 4.000 -2.310 3.533e-02 0.512 -3.744 AIM2 absent in melanoma 2 1 -157298898 NM_004833 1q22 Hs.281898 11

protein binding

nucleus

immune response

 
203227_s_at -0.293 7.828 -2.310 3.534e-02 0.512 -3.744 TSPAN31 tetraspanin 31 12 56425050 NM_005981 12q13.3 Hs.632708 12

membrane fraction

integral to plasma membrane

positive regulation of cell proliferation

membrane

 
210299_s_at -0.362 12.759 -2.308 3.544e-02 0.512 -3.746 FHL1 four and a half LIM domains 1 X 135056526, 135057224, 135058402, 135079120, 135079731, 135106578, 135106720 AF063002 Xq26 Hs.435369 38

molecular_function

cellular_component

nucleus

cytoplasm

cytosol

multicellular organismal development

muscle organ development

zinc ion binding

organ morphogenesis

cell growth

cell differentiation

metal ion binding

 
220579_at -0.234 4.036 -2.308 3.544e-02 0.512 -3.746 FLJ14100 hypothetical protein FLJ14100 1   NM_025025 1p36.33 Hs.711221 1    
220753_s_at 0.275 6.227 2.308 3.544e-02 0.512 -3.746 CRYL1 crystallin, lambda 1 13 -19875805 NM_015974 13q12.11 Hs.370703 6

binding

cytosol

fatty acid metabolic process

metabolic process

oxidoreductase activity

protein homodimerization activity

L-gulonate 3-dehydrogenase activity

NAD binding

 
244640_at 0.197 2.477 2.308 3.544e-02 0.512 -3.746 ZNF850P zinc finger protein 850 pseudogene 19   AW440392 19q13.12 Hs.406307 1

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
201993_x_at -0.217 8.794 -2.308 3.545e-02 0.512 -3.747 HNRPDL heterogeneous nuclear ribonucleoprotein D-like 4 -83563370 NM_005463 4q13-q21 Hs.527105 14

nucleotide binding

DNA binding

double-stranded DNA binding

single-stranded DNA binding

RNA binding

protein binding

nucleus

cytoplasm

RNA processing

poly(A) RNA binding

heterogeneous nuclear ribonucleoprotein complex

regulation of transcription

 
230847_at 0.227 3.855 2.308 3.545e-02 0.512 -3.747 WRNIP1 Werner helicase interacting protein 1 6 2710664 T79870 6p25.2 Hs.236828 14

nucleotide binding

DNA synthesis during DNA repair

DNA binding

protein binding

protein binding

ATP binding

nucleus

response to DNA damage stimulus

hydrolase activity

ATPase activity

regulation of DNA replication initiation

 
209395_at 0.306 2.365 2.308 3.547e-02 0.513 -3.747 CHI3L1 chitinase 3-like 1 (cartilage glycoprotein-39) 1 -201414681 M80927 1q32.1 Hs.382202 71

catalytic activity

chitinase activity

extracellular matrix structural constituent

sugar binding

extracellular region

proteinaceous extracellular matrix

extracellular space

carbohydrate metabolic process

chitin catabolic process

cation binding

 
213778_x_at -0.179 6.100 -2.307 3.549e-02 0.513 -3.748 ZNF276 zinc finger protein 276 16 88314893, 88315452 AI983201 16q24.3 Hs.290154 8

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
216180_s_at -0.320 5.900 -2.307 3.553e-02 0.513 -3.749 SYNJ2 synaptojanin 2 6 158322906 AK026758 6q25.3 Hs.434494 18

RNA binding

inositol or phosphatidylinositol phosphatase activity

phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity

protein binding

membrane

dephosphorylation

hydrolase activity

Inositol phosphate metabolism

Metabolic pathways

Phosphatidylinositol signaling system

223828_s_at 0.200 3.883 2.306 3.556e-02 0.513 -3.749 LGALS12 lectin, galactoside-binding, soluble, 12 11 63030099, 63032034 AF222694 11q13 Hs.502774 5

sugar binding

nucleus

mitochondrion

apoptosis

induction of apoptosis by intracellular signals

lactose binding

 
203089_s_at 0.213 6.857 2.306 3.556e-02 0.513 -3.749 HTRA2 HtrA serine peptidase 2 2 74610039 NM_013247 2p12 Hs.469045 Hs.716372 54

serine-type endopeptidase activity

nucleus

mitochondrion

mitochondrial intermembrane space

endoplasmic reticulum

endoplasmic reticulum membrane

proteolysis

apoptosis

response to stress

mitochondrion organization

adult walking behavior

peptidase activity

induction of apoptosis by intracellular signals

membrane

integral to membrane

forebrain development

regulation of multicellular organism growth

neuron development

unfolded protein binding

Parkinson's disease

215179_x_at 0.210 8.176 2.306 3.556e-02 0.513 -3.749 PGF placental growth factor 14 -74478290 AK023843 14q24-q31 Hs.252820 79

angiogenesis

extracellular region

signal transduction

cell-cell signaling

multicellular organismal development

growth factor activity

heparin binding

positive regulation of cell proliferation

membrane

cell differentiation

mTOR signaling pathway

Focal adhesion

Pathways in cancer

Renal cell carcinoma

Pancreatic cancer

Bladder cancer

217856_at -0.419 5.399 -2.306 3.557e-02 0.513 -3.749 RBM8A RNA binding motif protein 8A 1 144218994 AF182415 1q12 Hs.356873 43

nucleotide binding

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

nuclear mRNA splicing, via spliceosome

mRNA binding

protein binding

nucleus

spliceosomal complex

cytoplasm

transport

biological_process

RNA splicing

nuclear speck

exon-exon junction complex

mRNA transport

 
1557079_at 0.329 2.395 2.306 3.557e-02 0.513 -3.750 ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) 13 100902966 AI753143 13q33 Hs.696554 5

receptor activity

binding

extracellular region

cell adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

integrin complex

 
37965_at 0.301 6.330 2.306 3.558e-02 0.513 -3.750 PARVB parvin, beta 22 42726505, 42751500 AA181053 22q13.2-q13.33 Hs.475074 18

actin binding

protein binding

cytoplasm

cytoskeleton

plasma membrane

focal adhesion

cell adhesion

cell junction

Focal adhesion

1552299_at -0.221 4.250 -2.306 3.558e-02 0.513 -3.750 AKD1 adenylate kinase domain containing 1 6 -110059592, -109920751 NM_145025 6q21 Hs.205144 Hs.335027 Hs.486169 6

ATP binding

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

nucleobase, nucleoside, nucleotide kinase activity

 
208524_at 0.201 4.539 2.306 3.560e-02 0.513 -3.750 GPR15 G protein-coupled receptor 15 3 99733567 NM_005290 3q11.2-q13.1 Hs.563128 11

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

purinergic nucleotide receptor activity, G-protein coupled

 
200853_at -0.346 8.798 -2.305 3.563e-02 0.513 -3.751 H2AFZ H2A histone family, member Z 4 -101088266 NM_002106 4q24 Hs.119192 37

nucleosome

DNA binding

nucleus

chromosome

nucleosome assembly

Systemic lupus erythematosus

238937_at 0.713 5.825 2.305 3.569e-02 0.514 -3.752 ZNF420 zinc finger protein 420 19 42261221 AI339586 19q13.12 Hs.444992 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
209185_s_at -0.948 8.675 -2.305 3.569e-02 0.514 -3.752 IRS2 insulin receptor substrate 2 13 -109204184 AF073310 13q34 Hs.442344 118

positive regulation of mesenchymal cell proliferation

signal transducer activity

insulin receptor binding

plasma membrane

signal transduction

brain development

insulin receptor signaling pathway

negative regulation of plasma membrane long-chain fatty acid transport

positive regulation of glucose metabolic process

regulation of lipid metabolic process

protein kinase binding

protein domain specific binding

positive regulation of cell migration

mammary gland development

positive regulation of fatty acid beta-oxidation

response to peptide hormone stimulus

phosphoinositide 3-kinase binding

positive regulation of glycogen biosynthetic process

positive regulation of glycogen biosynthetic process

positive regulation of glucose import

lipid homeostasis

Neurotrophin signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

Type II diabetes mellitus

215613_at 0.198 3.808 2.305 3.569e-02 0.514 -3.752 ADAM12 ADAM metallopeptidase domain 12 10 -127719902, -127692894 AU145357 10q26.3 Hs.594537 59

metalloendopeptidase activity

protein binding

extracellular region

plasma membrane

proteolysis

cell adhesion

myoblast fusion

peptidase activity

zinc ion binding

integral to membrane

SH3 domain binding

metal ion binding

 
228634_s_at -0.503 6.543 -2.304 3.570e-02 0.514 -3.753 CSDA cold shock domain protein A 12 -10742944 BF195718 12p13.1 Hs.221889 20

negative regulation of transcription from RNA polymerase II promoter

double-stranded DNA binding

transcription factor activity

RNA polymerase II transcription factor activity

transcription corepressor activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

response to cold

Tight junction

226368_at 0.204 4.921 2.304 3.570e-02 0.514 -3.753 CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 12 103374907 AI806905 12q Hs.17569 11

N-acetylgalactosamine 4-O-sulfotransferase activity

chondrocyte development

Golgi apparatus

respiratory gaseous exchange

post-embryonic development

membrane

integral to membrane

carbohydrate biosynthetic process

transferase activity

chondroitin sulfate biosynthetic process

negative regulation of transforming growth factor beta receptor signaling pathway

polysaccharide localization

tail morphogenesis

regulation of cell proliferation

embryonic digit morphogenesis

negative regulation of apoptosis

chondroitin 4-sulfotransferase activity

developmental growth

embryonic viscerocranium morphogenesis

embryonic skeletal system morphogenesis

cartilage development

Chondroitin sulfate biosynthesis

Sulfur metabolism

208984_x_at -0.241 6.098 -2.304 3.571e-02 0.514 -3.753 RBM10 RNA binding motif protein 10 X 46889574, 46889574 BC004181 Xp11.23 Hs.401509 23

nucleotide binding

RNA binding

intracellular

nucleus

mRNA processing

biological_process

zinc ion binding

RNA splicing

chromatin remodeling complex

metal ion binding

 
218035_s_at 0.205 3.727 2.304 3.573e-02 0.514 -3.754 RBM47 RNA binding motif protein 47 4 -40120028, -40120028 NM_019027 4p13-p12 Hs.518727 4

RNA binding

nucleus

 
213490_s_at -0.310 6.453 -2.304 3.576e-02 0.514 -3.754 MAP2K2 mitogen-activated protein kinase kinase 2 19 -4041319 AI762811 19p13.3 Hs.465627 98

nucleotide binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

extracellular region

protein amino acid phosphorylation

Ras protein signal transduction

transferase activity

MAPK signaling pathway

ErbB signaling pathway

Vascular smooth muscle contraction

VEGF signaling pathway

Gap junction

Toll-like receptor signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Long-term potentiation

Neurotrophin signaling pathway

Long-term depression

Regulation of actin cytoskeleton

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Prion diseases

Pathways in cancer

Renal cell carcinoma

Endometrial cancer

Glioma

Prostate cancer

Thyroid cancer

Melanoma

Bladder cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Non-small cell lung cancer

217066_s_at 0.267 6.055 2.303 3.576e-02 0.514 -3.754 DMPK dystrophia myotonica-protein kinase 19 -50964815, -50964815 M87313 19q13.3 Hs.631596 91

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

protein modification process

protein amino acid phosphorylation

regulation of heart contraction

transferase activity

 
218441_s_at 0.232 6.491 2.303 3.578e-02 0.514 -3.755 RPAP1 RNA polymerase II associated protein 1 15 -39596666 NM_015540 15q15.1 Hs.371045 7

DNA binding

DNA-directed RNA polymerase activity

nucleus

transcription

transferase activity

nucleotidyltransferase activity

 
1558815_at 0.222 2.717 2.303 3.581e-02 0.514 -3.755 SORBS2 sorbin and SH3 domain containing 2 4 -186743592, -186743592, -186743592, -186743592, -186743592, -186743591, -186743591 BC035329 4q35.1 Hs.619806 Hs.655143 30

structural constituent of cytoskeleton

protein binding

nucleus

cytoplasm

cytoskeletal adaptor activity

biological_process

structural constituent of muscle

actin cytoskeleton

Z disc

perinuclear region of cytoplasm

 
210479_s_at -0.561 6.339 -2.303 3.583e-02 0.514 -3.756 RORA RAR-related orphan receptor A 15 -58567776, -58567776, -58567776 L14611 15q22.2 Hs.560343 Hs.655155 33

transcription factor activity

steroid hormone receptor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

nitric oxide biosynthetic process

signal transduction

zinc ion binding

cerebellar Purkinje cell differentiation

regulation of macrophage activation

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

cGMP metabolic process

metal ion binding

 
203810_at -0.482 8.517 -2.302 3.584e-02 0.514 -3.756 DNAJB4 DnaJ (Hsp40) homolog, subfamily B, member 4 1 78243223 BG252490 1p31.1 Hs.13852 11

protein folding

response to unfolded protein

response to heat

heat shock protein binding

unfolded protein binding

 
219094_at -0.297 3.116 -2.302 3.588e-02 0.515 -3.757 ARMC8 armadillo repeat containing 8 3 139388837, 139388837 NM_014154 3q22.3 Hs.719108 4

binding

 
222447_at -0.343 7.726 -2.302 3.590e-02 0.515 -3.757 METTL9 methyltransferase like 9 16 21518356 BC000195 16p13-p12 Hs.279583 6    
227279_at 0.453 7.300 2.301 3.592e-02 0.515 -3.758 TCEAL3 transcription elongation factor A (SII)-like 3 X 102749489 AA847654 Xq22.2 Hs.311776 6

nucleus

regulation of transcription

 
219131_at -0.168 5.837 -2.301 3.593e-02 0.515 -3.758 UBIAD1 UbiA prenyltransferase domain containing 1 1 11255841 NM_013319 1p36-p34.1 Hs.522933 15

prenyltransferase activity

nucleus

cytoplasm

membrane

integral to membrane

 
1568780_at 0.464 3.280 2.301 3.593e-02 0.515 -3.758 LOC649305 hypothetical LOC649305 8   BC030211   Hs.638932 1    
203405_at -0.333 6.521 -2.301 3.594e-02 0.515 -3.759 PSMG1 proteasome (prosome, macropain) assembly chaperone 1 21 -39469253 NM_003720 21q22.3 Hs.473838 12

protein binding

cytoplasm

endoplasmic reticulum

proteasome assembly

 
207453_s_at -0.381 6.474 -2.300 3.597e-02 0.515 -3.759 DNAJB5 DnaJ (Hsp40) homolog, subfamily B, member 5 9 34979724, 34980266 NM_012266 9p13.3 Hs.237506 5

protein folding

response to unfolded protein

heat shock protein binding

unfolded protein binding

 
216199_s_at 0.268 7.761 2.300 3.601e-02 0.515 -3.760 MAP3K4 mitogen-activated protein kinase kinase kinase 4 6 161332811 AL109942 6q26 Hs.390428 20

nucleotide binding

activation of MAPKK activity

magnesium ion binding

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

ATP binding

response to stress

JNK cascade

transferase activity

MAPK signaling pathway

GnRH signaling pathway

222985_at -0.202 11.964 -2.300 3.602e-02 0.515 -3.760 YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 7 -75794043 AB024334 7q11.23 Hs.520974 56

protein kinase C binding

insulin-like growth factor receptor binding

cytoplasm

negative regulation of protein kinase activity

protein targeting

protein kinase C inhibitor activity

regulation of signal transduction

protein domain specific binding

regulation of neuron differentiation

regulation of synaptic plasticity

Cell cycle

Neurotrophin signaling pathway

208876_s_at 0.210 3.422 2.300 3.603e-02 0.515 -3.761 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 3 197951124 AI076186 3q29 Hs.518530 80

nucleotide binding

protein serine/threonine kinase activity

ATP binding

nucleus

cytoplasm

cytosol

negative regulation of protein kinase activity

apoptosis

signal transduction

membrane

transferase activity

regulation of growth

identical protein binding

interspecies interaction between organisms

protein amino acid autophosphorylation

perinuclear region of cytoplasm

MAPK signaling pathway

ErbB signaling pathway

Axon guidance

Focal adhesion

T cell receptor signaling pathway

Regulation of actin cytoskeleton

Renal cell carcinoma

229055_at 0.261 5.298 2.300 3.603e-02 0.515 -3.761 GPR68 G protein-coupled receptor 68 14 -90768628 AI805006 14q31 Hs.8882 14

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

inflammatory response

signal transduction

G-protein coupled receptor protein signaling pathway

 
227195_at 0.482 5.934 2.299 3.604e-02 0.515 -3.761 ZNF503 zinc finger protein 503 10 -76827610 AA603467 10q22.2 Hs.195710 6

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
218955_at -0.216 7.480 -2.299 3.606e-02 0.515 -3.761 BRF2 BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like 8 -37820560 NM_018310 8p11.23 Hs.709301 11

protein binding

nucleus

transcription factor complex

transcription initiation

regulation of transcription, DNA-dependent

zinc ion binding

transcription regulator activity

metal ion binding

 
229274_at 0.446 5.100 2.299 3.608e-02 0.515 -3.762 GNAS GNAS complex locus 20 56848189, 56861430, 56897574, 56899819, 56899820, 56900163 AI693143 20q13.3 Hs.125898 Hs.694849 221

nucleotide binding

ruffle

molecular_function

GTPase activity

signal transducer activity

GTP binding

extracellular region

membrane fraction

cytoplasm

cytoplasm

heterotrimeric G-protein complex

heterotrimeric G-protein complex

plasma membrane

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

activation of adenylate cyclase activity by G-protein signaling pathway

activation of adenylate cyclase activity

female pregnancy

sensory perception of smell

protein secretion

hormone-mediated signaling

guanyl nucleotide binding

intrinsic to membrane

mu-type opioid receptor binding

vesicle

trans-Golgi network membrane

sarcolemma

identical protein binding

intracellular transport

Calcium signaling pathway

Vascular smooth muscle contraction

Gap junction

Long-term depression

Taste transduction

GnRH signaling pathway

Melanogenesis

Vibrio cholerae infection

231973_s_at -0.490 4.745 -2.299 3.609e-02 0.515 -3.762 ANAPC1 anaphase promoting complex subunit 1 2 -112243110 AK001223 2q12.1 Hs.436527 26

nucleoplasm

cytosol

cell cycle

mitosis

modification-dependent protein catabolic process

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

cell division

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

232722_at 0.173 3.025 2.299 3.611e-02 0.515 -3.762 RNASET2 ribonuclease T2 6 -167262993 AK001769 6q27 Hs.529989 11

RNA binding

endonuclease activity

ribonuclease activity

extracellular region

RNA catabolic process

hydrolase activity

ribonuclease T2 activity

 
209741_x_at 0.422 7.092 2.299 3.611e-02 0.515 -3.763 SCAPER S-phase cyclin A-associated protein in the ER 15 -74427583, -74427583 AF119814 15q24 Hs.458986 7

intracellular

nucleus

endoplasmic reticulum

zinc ion binding

metal ion binding

 
222230_s_at 0.284 9.811 2.298 3.612e-02 0.515 -3.763 ACTR10 actin-related protein 10 homolog (S. cerevisiae) 14 57736585 AK022248 14q23.1 Hs.509451 7

protein binding

cytoplasm

cytoskeleton

dynactin complex

microtubule-based movement

 
227598_at 0.213 3.757 2.298 3.614e-02 0.515 -3.763 C7orf29 chromosome 7 open reading frame 29 7 149657870 AI762857 7q36.1 Hs.655915 4    
1555867_at 0.191 2.676 2.298 3.615e-02 0.515 -3.763 GNG4 guanine nucleotide binding protein (G protein), gamma 4 1 -233777607, -233777607 BM666010 1q42.3 Hs.159711 13

signal transducer activity

heterotrimeric G-protein complex

plasma membrane

signal transduction

regulation of G-protein coupled receptor protein signaling pathway

hormone-mediated signaling

negative regulation of cell growth

Chemokine signaling pathway

50400_at 0.177 4.793 2.298 3.617e-02 0.516 -3.764 PAOX polyamine oxidase (exo-N4-amino) 10 135042730 AI743990 10q26.3 Hs.532469 8    
212032_s_at -0.293 7.334 -2.297 3.619e-02 0.516 -3.764 PTOV1 prostate tumor overexpressed 1 19 55046227 AL046054 19q13.33 Hs.587979 11

nucleus

cytoplasm

plasma membrane

regulation of transcription

perinuclear region of cytoplasm

 
208842_s_at -0.221 7.657 -2.297 3.622e-02 0.516 -3.765 GORASP2 golgi reassembly stacking protein 2, 55kDa 2 171493956 W93787 2q31.1-q31.2 Hs.431317 16

protein binding

Golgi apparatus

Golgi medial cisterna

Golgi organization

membrane

 
1553626_a_at -0.202 2.337 -2.297 3.623e-02 0.516 -3.765 C17orf57 chromosome 17 open reading frame 57 17 42756348 NM_152347 17q21.32 Hs.463303 2

calcium ion binding

 
226658_at -0.374 4.837 -2.297 3.623e-02 0.516 -3.765 PDPN podoplanin 1 13782838, 13784553 AW590196 1p36.21 Hs.468675 48

cell morphogenesis

ruffle

lymphangiogenesis

plasma membrane

integral to plasma membrane

prostaglandin metabolic process

water transport

cell cycle

signal transduction

multicellular organismal development

cell proliferation

regulation of cell shape

folic acid transporter activity

amino acid transmembrane transporter activity

water channel activity

folic acid transport

cell-cell adhesion

lamellipodium

filopodium

positive regulation of cell migration

tube morphogenesis

lung alveolus development

 
207695_s_at 0.480 4.624 2.297 3.623e-02 0.516 -3.765 IGSF1 immunoglobulin superfamily, member 1 X -130245822, -130235162 NM_001555 Xq25 Hs.22111 15

receptor activity

protein binding

extracellular region

signal transduction

membrane

integral to membrane

regulation of transcription

inhibin beta-A binding

inhibin beta-B binding

 
1560078_at -0.216 4.273 -2.297 3.623e-02 0.516 -3.766 LAMA3 laminin, alpha 3 18 19523559, 19706981 AL708055 18q11.2 Hs.436367 49

receptor binding

structural molecule activity

extracellular region

basement membrane

laminin-1 complex

epidermis development

regulation of cell adhesion

regulation of cell migration

regulation of embryonic development

Focal adhesion

ECM-receptor interaction

Pathways in cancer

Small cell lung cancer

225402_at -0.384 4.989 -2.296 3.629e-02 0.516 -3.767 TP53RK TP53 regulating kinase 20 -44746410 BG339450 20q13.2 Hs.440263 12

nucleotide binding

p53 binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

ATP binding

nucleus

protein amino acid phosphorylation

transferase activity

 
1564300_at 0.251 3.458 2.295 3.633e-02 0.516 -3.768 LOC100129058 similar to hCG2038656 3   AK097471 3p21.2   1    
213116_at 0.273 5.404 2.295 3.633e-02 0.516 -3.768 NEK3 NIMA (never in mitosis gene a)-related kinase 3 13 -51604780, -51604779, -51604779 AI191920 13q14.13 Hs.409989 12

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

protein amino acid phosphorylation

cell cycle

mitosis

transferase activity

cell division

 
217467_at 0.178 3.159 2.295 3.634e-02 0.516 -3.768 BTF3 basic transcription factor 3 5 72830005 M90356 5q13.2 Hs.591768 12

RNA polymerase II transcription factor activity

protein binding

nucleus

transcription from RNA polymerase II promoter

regulation of transcription

 
1557227_s_at -0.219 3.072 -2.295 3.634e-02 0.516 -3.768 TPR translocated promoter region (to activated MET oncogene) 1 -184547408 AW235355 1q25 Hs.279640 30

nucleotide binding

kinetochore

serine-tRNA ligase activity

protein binding

ATP binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

translation

seryl-tRNA aminoacylation

protein import into nucleus

mitotic cell cycle spindle assembly checkpoint

protein transport

membrane

mRNA transport

intracellular protein transmembrane transport

Pathways in cancer

Thyroid cancer

219585_at -0.301 5.123 -2.295 3.637e-02 0.516 -3.769 CCDC28B coiled-coil domain containing 28B 1 32438788 NM_024296 1p35.1 Hs.718470 10    
211105_s_at -0.615 7.707 -2.295 3.637e-02 0.516 -3.769 NFATC1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 18 75256759, 75256759, 75261313 U80918 18q23 Hs.534074 Hs.701518 83

transcription factor activity

FK506 binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

intracellular signaling cascade

transcription activator activity

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

235025_at -0.257 2.571 -2.295 3.638e-02 0.516 -3.769 WDR89 WD repeat domain 89 14 -63133509, -63133509 AW196959 14q23.2 Hs.655666 6    
206117_at -0.409 13.220 -2.295 3.638e-02 0.516 -3.769 TPM1 tropomyosin 1 (alpha) 15 61121890, 61121890, 61127688 NM_000366 15q22.1 Hs.133892 76

stress fiber

positive regulation of heart rate by epinephrine

actin binding

structural constituent of cytoskeleton

cytoplasm

cytoskeleton

muscle thin filament tropomyosin

cell motion

regulation of muscle contraction

cytoskeleton organization

regulation of heart contraction

structural constituent of muscle

sarcomere

muscle filament sliding

negative regulation of cell migration

ruffle organization

bleb

ruffle membrane

positive regulation of ATPase activity

cellular response to reactive oxygen species

wound healing

sarcomere organization

positive regulation of cell adhesion

positive regulation of stress fiber formation

ventricular cardiac muscle morphogenesis

cardiac muscle contraction

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

229177_at 0.230 5.551 2.294 3.641e-02 0.516 -3.770 C16orf89 chromosome 16 open reading frame 89 16 -5034123 AI823572 16p13.3 Hs.11782 4

extracellular region

 
201181_at -0.230 4.746 -2.294 3.642e-02 0.516 -3.770 GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 1 109892708 NM_006496 1p13 Hs.73799 54

nucleotide binding

GTPase activity

signal transducer activity

protein binding

GTP binding

cytoplasm

Golgi apparatus

transport

signal transduction

G-protein coupled receptor protein signaling pathway

negative regulation of adenylate cyclase activity

guanyl nucleotide binding

Chemokine signaling pathway

Axon guidance

Tight junction

Gap junction

Leukocyte transendothelial migration

Long-term depression

Melanogenesis

232073_at -0.254 4.127 -2.294 3.642e-02 0.516 -3.770 PPFIA2 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 12 -80177486 AL157453 12q21.31 Hs.506216 7

protein binding

cytoplasm

cell-matrix adhesion

cell surface

 
244680_at 0.270 3.784 2.294 3.644e-02 0.516 -3.770 GLRB glycine receptor, beta 4 158216726 AI701428 4q31.3 Hs.32973 14

startle response

ion channel activity

extracellular ligand-gated ion channel activity

protein binding

membrane fraction

plasma membrane

integral to plasma membrane

ion transport

chloride transport

neuropeptide signaling pathway

synaptic transmission

acrosome reaction

nervous system development

visual perception

adult walking behavior

glycine binding

extracellular-glycine-gated chloride channel activity

cell junction

neurotransmitter receptor activity

chloride ion binding

chloride channel complex

regulation of membrane potential

synapse

postsynaptic membrane

synaptic transmission, glycinergic

righting reflex

Neuroactive ligand-receptor interaction

1568377_x_at 0.212 5.890 2.294 3.645e-02 0.516 -3.771 DEFB124 defensin, beta 124 20 -29516969 AY122476 20q11.1 Hs.381373 3

extracellular region

defense response to bacterium

 
201581_at -0.341 8.777 -2.294 3.645e-02 0.516 -3.771 TMX4 thioredoxin-related transmembrane protein 4 20 -7909715 BF572868 20p12 Hs.169358 11

mitochondrion

transport

membrane

integral to membrane

electron transport chain

cell redox homeostasis

 
223601_at 0.184 3.061 2.293 3.650e-02 0.517 -3.772 OLFM2 olfactomedin 2 19 -9825393 AF131839 19p13.2 Hs.169743 9

extracellular region

 
211570_s_at -0.291 6.748 -2.293 3.650e-02 0.517 -3.772 RAPSN receptor-associated protein of the synapse 11 -47415890 BC004196 11p11.2-p11.1 Hs.81218 32

protein binding

cytoplasm

Golgi apparatus

cytoskeleton

plasma membrane

synaptic transmission

zinc ion binding

cell junction

neuromuscular junction

acetylcholine receptor binding

postsynaptic membrane

metal ion binding

 
202959_at 0.305 6.260 2.293 3.651e-02 0.517 -3.772 MUT methylmalonyl Coenzyme A mutase 6 -49506949 AI433712 6p12.3 Hs.485527 42

methylmalonyl-CoA mutase activity

mitochondrion

mitochondrial matrix

metabolic process

post-embryonic development

cobalamin binding

metal ion binding

cobalt ion binding

Valine, leucine and isoleucine degradation

Propanoate metabolism

Metabolic pathways

1554029_a_at -0.328 2.907 -2.293 3.652e-02 0.517 -3.772 TTC37 tetratricopeptide repeat domain 37 5 -94825877 BC030966 5q15 Hs.482868 4

binding

RNA degradation

237795_s_at 0.238 3.967 2.292 3.654e-02 0.517 -3.773 SP2 Sp2 transcription factor 17 43328514 AW294585 17q21.32 Hs.514276 18

DNA binding

RNA polymerase II transcription factor activity

intracellular

nucleus

regulation of transcription from RNA polymerase II promoter

immune response

zinc ion binding

histone deacetylase binding

regulation of transcription

metal ion binding

 
219504_s_at -0.218 5.810 -2.292 3.658e-02 0.517 -3.774 RPAP2 RNA polymerase II associated protein 2 1 92537109 NM_024813 1p22.1 Hs.444421 7

membrane

integral to membrane

 
244206_at -0.308 3.169 -2.292 3.658e-02 0.517 -3.774 ANUBL1 AN1, ubiquitin-like, homolog (Xenopus laevis) 10 -45431044 AW469676 10q11.22 Hs.89029 5

zinc ion binding

metal ion binding

 
212426_s_at 0.324 8.305 2.292 3.659e-02 0.517 -3.774 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide 2 -9641556 BF033313 2p25.1 Hs.74405 93

cytoplasm

protein targeting

small GTPase mediated signal transduction

protein domain specific binding

negative regulation of transcription, DNA-dependent

protein N-terminus binding

Cell cycle

Neurotrophin signaling pathway

Pathogenic Escherichia coli infection - EHEC

225908_at 0.213 8.659 2.292 3.660e-02 0.517 -3.774 IAH1 isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae) 2 9532120 AI829927 2p25.1 Hs.614939 2

lipid catabolic process

hydrolase activity, acting on ester bonds

 
229725_at 0.379 3.710 2.291 3.662e-02 0.517 -3.775 ACSL6 acyl-CoA synthetase long-chain family member 6 5 -131317050 AV705292 5q31 Hs.14945 15

nucleotide binding

magnesium ion binding

long-chain-fatty-acid-CoA ligase activity

ATP binding

mitochondrion

mitochondrial outer membrane

peroxisome

peroxisomal membrane

endoplasmic reticulum

microsome

plasma membrane

lipid metabolic process

acyl-CoA metabolic process

metabolic process

integral to membrane

ligase activity

Fatty acid metabolism

Metabolic pathways

PPAR signaling pathway

Adipocytokine signaling pathway

208365_s_at 0.240 4.154 2.291 3.663e-02 0.517 -3.775 GRK4 G protein-coupled receptor kinase 4 4 2935140 NM_005307 4p16.3 Hs.32959 27

nucleotide binding

G-protein coupled receptor kinase activity

signal transducer activity

ATP binding

protein amino acid phosphorylation

signal transduction

regulation of G-protein coupled receptor protein signaling pathway

transferase activity

Chemokine signaling pathway

Endocytosis

228820_at -0.330 6.222 -2.290 3.668e-02 0.517 -3.776 XPNPEP3 X-prolyl aminopeptidase (aminopeptidase P) 3, putative 22 39583039 BE674036 22q13.31-q13.33 Hs.529163 7

aminopeptidase activity

mitochondrion

peptidase activity

metallopeptidase activity

cellular process

manganese ion binding

metal ion binding

 
1555626_a_at 0.216 5.154 2.290 3.668e-02 0.517 -3.776 SLAMF1 signaling lymphocytic activation molecule family member 1 1 -158846514 BC012602 1q22-q23 Hs.523660 36

antigen binding

transmembrane receptor activity

plasma membrane

positive regulation of cell proliferation

cell surface

integral to membrane

interspecies interaction between organisms

lymphocyte activation

 
213364_s_at 0.341 6.728 2.290 3.669e-02 0.517 -3.776 SNX1 sorting nexin 1 15 62175229 AI052536 15q22.31 Hs.188634 28

protein binding

cytoplasm

endosome

Golgi apparatus

intracellular protein transport

endocytosis

cell communication

protein transporter activity

membrane

phosphoinositide binding

 
240859_at 0.357 5.232 2.290 3.670e-02 0.517 -3.777 ZFYVE16 zinc finger, FYVE domain containing 16 5 79739593 N20928 5q14 Hs.482660 Hs.660410 15

protein binding

phosphatidylinositol binding

cytoplasm

protein targeting to lysosome

signal transduction

zinc ion binding

protein transporter activity

membrane

vesicle organization

endosome transport

regulation of endocytosis

BMP signaling pathway

early endosome membrane

metal ion binding

TGF-beta signaling pathway

221599_at 0.382 9.311 2.290 3.670e-02 0.517 -3.777 C11orf67 chromosome 11 open reading frame 67 11 77209855 BC002752 11q14.1 Hs.503357 3    
231140_at -0.274 4.792 -2.290 3.671e-02 0.517 -3.777 TPPP2 tubulin polymerization-promoting protein family member 2 14 20568184 AA913948 14q11.2 Hs.406966 5    
204382_at -0.189 6.234 -2.290 3.673e-02 0.517 -3.777 NAT9 N-acetyltransferase 9 (GCN5-related, putative) 17 -70278280 NM_015654 17q25.1 Hs.144058 12

N-acetyltransferase activity

metabolic process

acyltransferase activity

transferase activity

protein complex

 
244527_at 0.209 3.058 2.290 3.673e-02 0.517 -3.777 TRIO triple functional domain (PTPRF interacting) 5 14196828 BG055304 5p15.2 Hs.130031 22

nucleotide binding

protein serine/threonine kinase activity

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

ATP binding

intracellular

cytoplasm

protein amino acid phosphorylation

transmembrane receptor protein tyrosine phosphatase signaling pathway

transferase activity

regulation of Rho protein signal transduction

 
210298_x_at -0.508 11.878 -2.290 3.674e-02 0.517 -3.777 FHL1 four and a half LIM domains 1 X 135056526, 135057224, 135058402, 135079120, 135079731, 135106578, 135106720 AF098518 Xq26 Hs.435369 38

molecular_function

cellular_component

nucleus

cytoplasm

cytosol

multicellular organismal development

muscle organ development

zinc ion binding

organ morphogenesis

cell growth

cell differentiation

metal ion binding

 
1556573_s_at -0.179 4.715 -2.289 3.676e-02 0.517 -3.778 LOC286178 hypothetical protein LOC286178 8   AK090741 8q12.1 Hs.255156 1    
204875_s_at 0.187 2.407 2.289 3.680e-02 0.517 -3.779 GMDS GDP-mannose 4,6-dehydratase 6 -1569039 NM_001500 6p25 Hs.144496 Hs.660919 11

binding

intracellular

cytoplasm

carbohydrate metabolic process

leukocyte adhesion

GDP-mannose 4,6-dehydratase activity

lyase activity

GDP-mannose metabolic process

'de novo' GDP-L-fucose biosynthetic process

cellular metabolic process

coenzyme binding

Fructose and mannose metabolism

Amino sugar and nucleotide sugar metabolism

Metabolic pathways

212554_at -0.252 11.653 -2.289 3.680e-02 0.517 -3.779 CAP2 CAP, adenylate cyclase-associated protein, 2 (yeast) 6 17501714 N90755 6p22.3 Hs.132902 7

actin binding

binding

plasma membrane

cytoskeleton organization

establishment or maintenance of cell polarity

signal transduction

activation of adenylate cyclase activity

 
231869_at -0.193 2.489 -2.289 3.680e-02 0.517 -3.779 KIAA1586 KIAA1586 6 57019342 BF339845 6p12.1 Hs.709521 2    
208941_s_at 0.212 6.086 2.288 3.682e-02 0.517 -3.779 SEPHS1 selenophosphate synthetase 1 10 -13400086 BC000941 10p14 Hs.124027 8

nucleotide binding

selenide, water dikinase activity

ATP binding

GTP binding

protein modification process

selenium binding

transferase activity

Selenoamino acid metabolism

Metabolic pathways

222750_s_at 0.449 5.174 2.288 3.682e-02 0.517 -3.779 SRD5A3 steroid 5 alpha-reductase 3 4 55907165 BC002480 4q12 Hs.39311 3

3-oxo-5-alpha-steroid 4-dehydrogenase activity

cytoplasm

endoplasmic reticulum

microsome

lipid metabolic process

membrane

integral to membrane

oxidoreductase activity, acting on the CH-CH group of donors

oxidation reduction

Androgen and estrogen metabolism

207553_at 0.239 3.804 2.288 3.685e-02 0.517 -3.780 OPRK1 opioid receptor, kappa 1 8 -54300828 NM_000912 8q11.2 Hs.106795 46

receptor activity

G-protein coupled receptor activity

kappa-opioid receptor activity

protein binding

plasma membrane

integral to plasma membrane

immune response

signal transduction

G-protein coupled receptor protein signaling pathway

inhibition of adenylate cyclase activity by G-protein signaling

synaptic transmission

sensory perception

behavior

viral genome replication

Neuroactive ligand-receptor interaction

242816_at -0.211 3.767 -2.288 3.686e-02 0.517 -3.780 GNAS GNAS complex locus 20 56848189, 56861430, 56897574, 56899819, 56899820, 56900163 AI339489 20q13.3 Hs.125898 Hs.694849 221

nucleotide binding

ruffle

molecular_function

GTPase activity

signal transducer activity

GTP binding

extracellular region

membrane fraction

cytoplasm

cytoplasm

heterotrimeric G-protein complex

heterotrimeric G-protein complex

plasma membrane

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

activation of adenylate cyclase activity by G-protein signaling pathway

activation of adenylate cyclase activity

female pregnancy

sensory perception of smell

protein secretion

hormone-mediated signaling

guanyl nucleotide binding

intrinsic to membrane

mu-type opioid receptor binding

vesicle

trans-Golgi network membrane

sarcolemma

identical protein binding

intracellular transport

Calcium signaling pathway

Vascular smooth muscle contraction

Gap junction

Long-term depression

Taste transduction

GnRH signaling pathway

Melanogenesis

Vibrio cholerae infection

1560112_at 0.209 2.600 2.288 3.688e-02 0.517 -3.781 WDFY2 WD repeat and FYVE domain containing 2 13 51056484 AK054833 13q14.3 Hs.208550 7

zinc ion binding

metal ion binding

 
201816_s_at -0.293 11.867 -2.287 3.689e-02 0.517 -3.781 GBAS glioblastoma amplified sequence 7 55999789 NM_001483 7p12 Hs.591069 9

membrane fraction

mitochondrion

integral to plasma membrane

 
219044_at 0.645 6.569 2.287 3.690e-02 0.517 -3.781 THNSL2 threonine synthase-like 2 (S. cerevisiae) 2 88250949 NM_018271 2p11.2 Hs.516179 6

metabolic process

lyase activity

pyridoxal phosphate binding

 
203529_at -0.271 9.073 -2.287 3.691e-02 0.517 -3.781 PPP6C protein phosphatase 6, catalytic subunit 9 -126948672 NM_016294 9q33.3 Hs.715605 16

G1/S transition of mitotic cell cycle

protein serine/threonine phosphatase activity

iron ion binding

protein binding

cytoplasm

cytosol

protein amino acid dephosphorylation

cell cycle

hydrolase activity

manganese ion binding

metal ion binding

 
204003_s_at 0.210 6.583 2.287 3.692e-02 0.517 -3.782 NUPL2 nucleoporin like 2 7 23187970 NM_007342 7p15 Hs.408241 13

nucleic acid binding

nuclear export signal receptor activity

nucleus

nuclear pore

cytosol

protein export from nucleus

zinc ion binding

protein transport

membrane

metal ion binding

mRNA transport

intracellular protein transmembrane transport

 
238123_at 0.261 4.134 2.287 3.692e-02 0.517 -3.782 GABRQ gamma-aminobutyric acid (GABA) receptor, theta X 151557292 W52448 Xq28 Hs.283081 8

transmembrane receptor activity

GABA-A receptor activity

ion channel activity

extracellular ligand-gated ion channel activity

chloride channel activity

neurotransmitter transporter activity

plasma membrane

integral to plasma membrane

ion transport

signal transduction

cell junction

neurotransmitter receptor activity

chloride ion binding

chloride channel complex

synapse

postsynaptic membrane

Neuroactive ligand-receptor interaction

51158_at 0.216 4.303 2.287 3.692e-02 0.517 -3.782 FAM174B family with sequence similarity 174, member B 15 -90961682 AI801973 15q26.1 Hs.27373 Hs.702316 2

membrane

integral to membrane

 
204279_at 0.359 6.795 2.287 3.692e-02 0.517 -3.782 PSMB9 proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2) 6 32929915, 4202792, 4007991 NM_002800 6p21.3 Hs.654585 72

threonine-type endopeptidase activity

nucleus

cytoplasm

cytosol

proteasome core complex

immune response

peptidase activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

proteolysis involved in cellular protein catabolic process

Proteasome

202207_at 0.811 4.276 2.287 3.694e-02 0.517 -3.782 ARL4C ADP-ribosylation factor-like 4C 2 -235066424 BG435404 2q37.1 Hs.111554 Hs.719190 7

nucleotide binding

GTPase activity

GTP binding

intracellular

nucleus

small GTPase mediated signal transduction

 
215960_at 0.198 4.066 2.287 3.694e-02 0.517 -3.782 SLC5A4 solute carrier family 5 (low affinity glucose cotransporter), member 4 22 -30944464 AJ133127 22q12.2-q12.3 Hs.130101 8

transporter activity

ion transport

sodium ion transport

carbohydrate transport

symporter activity

membrane

integral to membrane

sodium ion binding

 
226824_at 0.328 5.401 2.286 3.696e-02 0.517 -3.783 CPXM2 carboxypeptidase X (M14 family), member 2 10 -125495141 AW513612 10q26.13 Hs.656887 5

metallocarboxypeptidase activity

extracellular region

proteolysis

cell adhesion

zinc ion binding

 
214515_at 0.214 4.024 2.286 3.697e-02 0.517 -3.783 OR1E1 olfactory receptor, family 1, subfamily E, member 1 17 -3247509 NM_003553 17p13.3 Hs.278485 7

receptor activity

olfactory receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

sensory perception of smell

integral to membrane

response to stimulus

Olfactory transduction

202574_s_at 0.367 6.889 2.286 3.699e-02 0.517 -3.783 CSNK1G2 casein kinase 1, gamma 2 19 1892160 NM_001319 19p13.3 Hs.651905 16

nucleotide binding

protein serine/threonine kinase activity

ATP binding

cytoplasm

protein amino acid phosphorylation

signal transduction

Wnt receptor signaling pathway

transferase activity

Hedgehog signaling pathway

232457_at 0.294 4.822 2.286 3.700e-02 0.517 -3.784 LIMCH1 LIM and calponin homology domains 1 4 41057560, 41309675 AU147704 4p13 Hs.335163 10

actin binding

zinc ion binding

actomyosin structure organization

metal ion binding

 
219890_at -0.235 2.952 -2.286 3.701e-02 0.517 -3.784 CLEC5A C-type lectin domain family 5, member A 7 -141273625 NM_013252 7q33 Hs.446235 8

binding

sugar binding

integral to plasma membrane

immune response

cellular defense response

signal transduction

membrane

 
203424_s_at -0.494 6.756 -2.286 3.703e-02 0.517 -3.784 IGFBP5 insulin-like growth factor binding protein 5 2 -217245072 AW157548 2q33-q36 Hs.607212 90

regulation of cell growth

osteoblast differentiation

extracellular region

signal transduction

negative regulation of smooth muscle cell migration

insulin-like growth factor binding protein complex

negative regulation of translation

insulin-like growth factor I binding

negative regulation of insulin-like growth factor receptor signaling pathway

negative regulation of smooth muscle cell proliferation

 
214411_x_at 0.210 5.412 2.285 3.704e-02 0.517 -3.785 CTRB2 chymotrypsinogen B2 16 -73795494 AW584011 16q23.1 Hs.632211 6

serine-type endopeptidase activity

extracellular region

extracellular space

proteolysis

digestion

peptidase activity

 
201892_s_at -0.325 9.409 -2.285 3.707e-02 0.518 -3.785 IMPDH2 IMP (inosine monophosphate) dehydrogenase 2 3 -49036765 NM_000884 3p21.2 Hs.654400 31

IMP dehydrogenase activity

IMP dehydrogenase activity

protein binding

cytosol

purine nucleotide biosynthetic process

GMP biosynthetic process

oxidoreductase activity

potassium ion binding

lymphocyte proliferation

metal ion binding

oxidation reduction

Purine metabolism

Drug metabolism - other enzymes

Biosynthesis of alkaloids derived from histidine and purine

Metabolic pathways

235539_at -0.242 3.344 -2.284 3.713e-02 0.518 -3.787 NUMA1 nuclear mitotic apparatus protein 1 11 -71391558 AW964431 11q13 Hs.325978 47

mitotic anaphase

spindle pole

structural molecule activity

protein binding

nucleus

spindle microtubule

nucleus organization

microtubule binding

nuclear matrix

dendrite

cell soma

meiotic cell cycle

 
215250_at 0.332 5.473 2.284 3.713e-02 0.518 -3.787 TMEM111 transmembrane protein 111 3 -9980635 AU147317 3p25.3 Hs.475392 6

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
1564787_at 0.216 4.802 2.284 3.715e-02 0.518 -3.787 LOC643923 hypothetical protein LOC643923 11 106967680 AK058066 11q22.3 Hs.647220      
225045_at 0.226 5.965 2.284 3.717e-02 0.518 -3.787 CCDC88A coiled-coil domain containing 88A 2 -55368483 AB033038 2p16.1 Hs.292925 13

regulation of protein amino acid phosphorylation

actin binding

cytoplasm

endoplasmic reticulum

Golgi apparatus

cytosol

plasma membrane

regulation of DNA replication

microtubule binding

membrane organization

cell migration

lamellipodium

lamellipodium assembly

cytoplasmic vesicle

activation of protein kinase B activity

regulation of actin cytoskeleton organization

phosphoinositide binding

regulation of cell proliferation

protein homodimerization activity

protein kinase B binding

 
210568_s_at -0.243 4.693 -2.284 3.717e-02 0.518 -3.788 RECQL RecQ protein-like (DNA helicase Q1-like) 12 -21513111 BC001052 12p12 Hs.235069 29

nucleotide binding

DNA strand renaturation

DNA strand annealing activity

DNA binding

ATP-dependent DNA helicase activity

protein binding

ATP binding

nucleus

DNA repair

DNA recombination

hydrolase activity

 
213564_x_at 0.660 11.752 2.283 3.719e-02 0.518 -3.788 LDHB lactate dehydrogenase B 12 -21679542 BE042354 12p12.2-p12.1 Hs.446149 27

L-lactate dehydrogenase activity

binding

cytoplasm

oxidoreductase activity

anaerobic glycolysis

cellular carbohydrate metabolic process

oxidation reduction

Glycolysis / Gluconeogenesis

Cysteine and methionine metabolism

Pyruvate metabolism

Propanoate metabolism

Metabolic pathways

207040_s_at -0.299 10.356 -2.283 3.719e-02 0.518 -3.788 ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) 22 -39550546 NM_003932 22q13.2 Hs.712713 29

binding

cytoplasm

protein folding

protein binding, bridging

 
209112_at -0.356 9.602 -2.283 3.719e-02 0.518 -3.788 CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1) 12 12761568 BC001971 12p13.1-p12 Hs.238990 442

regulation of cyclin-dependent protein kinase activity

G1/S transition of mitotic cell cycle

protein kinase inhibitor activity

cyclin-dependent protein kinase inhibitor activity

transforming growth factor beta receptor, cytoplasmic mediator activity

protein binding

nucleus

cytoplasm

cytosol

induction of apoptosis

cell cycle

cell cycle arrest

negative regulation of cell proliferation

negative regulation of cell growth

negative regulation of gene-specific transcription

negative regulation of kinase activity

negative regulation of phosphorylation

autophagic cell death

ErbB signaling pathway

Cell cycle

Pathways in cancer

Prostate cancer

Chronic myeloid leukemia

Small cell lung cancer

221017_s_at -0.232 3.523 -2.282 3.731e-02 0.519 -3.791 LRRC3 leucine rich repeat containing 3 21 44699820 NM_030891 21q22.3 Hs.326579 5

protein binding

membrane

integral to membrane

 
214277_at 0.384 4.423 2.282 3.731e-02 0.519 -3.791 COX11 COX11 homolog, cytochrome c oxidase assembly protein (yeast) 17 -50393566, -50384257 AI376724 17q22 Hs.591171 8

cytochrome-c oxidase activity

copper ion binding

mitochondrion

mitochondrial inner membrane

respiratory gaseous exchange

respiratory chain complex IV assembly

electron carrier activity

membrane

integral to membrane

Oxidative phosphorylation

Metabolic pathways

213089_at 0.373 6.696 2.282 3.732e-02 0.519 -3.791 LOC100272216 hypothetical LOC100272216 5 -68962735, -639139, 931828 AU158490   Hs.631974      
224345_x_at 0.269 10.762 2.281 3.733e-02 0.519 -3.791 FAM162A family with sequence similarity 162, member A 3 123585712 AF107495 3q21.1 Hs.584881 8

membrane

integral to membrane

 
221674_s_at 0.159 5.098 2.281 3.733e-02 0.519 -3.791 CHRD chordin 3 185580554 AF209929 3q27 Hs.166186 21

skeletal system development

extracellular region

extracellular space

multicellular organismal development

cytokine binding

BMP signaling pathway in spinal cord dorsal/ventral patterning

negative regulation of cell migration

negative regulation of BMP signaling pathway

floor plate development

positive regulation of cell adhesion

TGF-beta signaling pathway

AFFX-HUMGAPDH/M33197_3_at -0.180 13.587 -2.281 3.736e-02 0.519 -3.792 GAPDH glyceraldehyde-3-phosphate dehydrogenase 12 6513917 AFFX-HUMGAPDH/M33197_3 12p13 Hs.544577 Hs.592355 Hs.598320 130

glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity

protein binding

cytoplasm

glucose metabolic process

glycolysis

membrane

oxidoreductase activity

perinuclear region of cytoplasm

NAD or NADH binding

oxidation reduction

Glycolysis / Gluconeogenesis

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

Alzheimer's disease

204595_s_at -0.190 4.697 -2.281 3.739e-02 0.519 -3.793 STC1 stanniocalcin 1 8 -23755378 AI300520 8p21-p11.2 Hs.25590 35

hormone activity

extracellular region

extracellular space

cellular calcium ion homeostasis

cell surface receptor linked signal transduction

cell-cell signaling

response to nutrient

 
211822_s_at 0.226 3.591 2.281 3.739e-02 0.519 -3.793 NLRP1 NLR family, pyrin domain containing 1 17 -5358161, -5345442 AF229061 17p13.2 Hs.652273 31

nucleotide binding

ATP binding

intracellular

nucleus

cytoplasm

induction of apoptosis

activation of caspase activity

defense response

caspase activator activity

enzyme binding

protein domain specific binding

regulation of apoptosis

neuron apoptosis

 
212871_at -0.395 5.925 -2.280 3.741e-02 0.519 -3.793 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 12 110764661 NM_003668 12q24.12-q24.13 Hs.413901 16

nucleotide binding

protein serine/threonine kinase activity

MAP kinase kinase activity

protein binding

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

signal transduction

transferase activity

MAPK signaling pathway

209693_at -0.217 5.514 -2.280 3.742e-02 0.519 -3.793 ASTN2 astrotactin 2 9 -118227327, -118227327 AF116574 9q33.1 Hs.601562 6

membrane

integral to membrane

 
224954_at 0.202 7.494 2.280 3.743e-02 0.519 -3.794 SHMT1 serine hydroxymethyltransferase 1 (soluble) 17 -18171911 Y14486 17p11.2 Hs.513987 Hs.636044 64

glycine hydroxymethyltransferase activity

glycine hydroxymethyltransferase activity

cytoplasm

cytosol

cytosol

glycine metabolic process

L-serine catabolic process

one-carbon metabolic process

purine base biosynthetic process

transferase activity

pyridoxal phosphate binding

protein homodimerization activity

folic acid metabolic process

protein tetramerization

Glycine, serine and threonine metabolism

Cyanoamino acid metabolism

One carbon pool by folate

Methane metabolism

Metabolic pathways

1556804_s_at 0.358 2.600 2.280 3.745e-02 0.519 -3.794 POLR3B polymerase (RNA) III (DNA directed) polypeptide B 12 105275565, 105275989 BC033542 12q23.3 Hs.610795 Hs.62696 8

DNA binding

DNA-directed RNA polymerase activity

nucleus

transcription

zinc ion binding

transferase activity

nucleotidyltransferase activity

ribonucleoside binding

metal ion binding

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

213213_at 0.228 5.781 2.280 3.745e-02 0.519 -3.794 DIDO1 death inducer-obliterator 1 20 -61006799, -61006799, -60989013, -60979534 AL035669 20q13.33 Hs.517172 18

protein binding

nucleus

cytoplasm

transcription

apoptosis

zinc ion binding

metal ion binding

 
206546_at -0.205 2.492 -2.279 3.748e-02 0.519 -3.795 SYCP2 synaptonemal complex protein 2 20 -57872012 NM_014258 20q13.33 Hs.202676 4

lateral element

DNA binding

protein binding

nucleus

apoptosis

cell cycle

meiotic prophase I

synaptonemal complex assembly

male meiosis

female meiosis

fertilization

organ morphogenesis

protein heterodimerization activity

male genitalia morphogenesis

cell division

 
1561579_at 0.221 4.195 2.279 3.748e-02 0.519 -3.795 LOC728445 hypothetical protein LOC728445 8   AI240136 8p11.21 Hs.713375      
1556725_a_at 0.183 2.204 2.279 3.748e-02 0.519 -3.795 LOC100128398 hypothetical protein LOC100128398 19   BC036750 19q13.43 Hs.655081 1    
224922_at -0.248 5.925 -2.279 3.750e-02 0.519 -3.795 CSNK2A2 casein kinase 2, alpha prime polypeptide 16 -56749312 AI022089 16q21 Hs.82201 143

nucleotide binding

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

Wnt receptor signaling pathway

transferase activity

protein N-terminus binding

regulation of cell cycle

Wnt signaling pathway

Adherens junction

Tight junction

224277_at -0.203 2.613 -2.278 3.754e-02 0.519 -3.796 MOP-1 MOP-1 4   AB014771 4q21.22 Hs.679418      
230475_at 0.303 5.722 2.278 3.756e-02 0.519 -3.797 C15orf59 chromosome 15 open reading frame 59 15 -71819193 AI368415 15q24.1 Hs.40794 1    
205943_at 0.755 3.134 2.278 3.757e-02 0.519 -3.797 TDO2 tryptophan 2,3-dioxygenase 4 157044296 NM_005651 4q31-q32 Hs.183671 16

tryptophan 2,3-dioxygenase activity

tryptophan 2,3-dioxygenase activity

iron ion binding

cytosol

oxidoreductase activity

tryptophan catabolic process to kynurenine

NAD metabolic process

metal ion binding

oxidation reduction

Tryptophan metabolism

Metabolic pathways

202803_s_at 0.290 5.036 2.278 3.758e-02 0.519 -3.797 ITGB2 integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) 21 -45130296, -45130296 NM_000211 21q22.3 Hs.375957 243

glycoprotein binding

receptor activity

cytoplasm

plasma membrane

plasma membrane

apoptosis

inflammatory response

cell adhesion

leukocyte adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

cell-cell signaling

integrin complex

regulation of cell shape

integral to membrane

protein kinase binding

neutrophil chemotaxis

regulation of peptidyl-tyrosine phosphorylation

Cell adhesion molecules (CAMs)

Natural killer cell mediated cytotoxicity

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

212981_s_at 0.396 6.630 2.278 3.759e-02 0.519 -3.797 FAM115A family with sequence similarity 115, member A 7 -143180981 BF030508 7q35 Hs.718446 6    
212551_at -0.298 11.501 -2.278 3.759e-02 0.519 -3.797 CAP2 CAP, adenylate cyclase-associated protein, 2 (yeast) 6 17501714 NM_006366 6p22.3 Hs.132902 7

actin binding

binding

plasma membrane

cytoskeleton organization

establishment or maintenance of cell polarity

signal transduction

activation of adenylate cyclase activity

 
208729_x_at 0.355 9.421 2.278 3.761e-02 0.519 -3.798 HLA-B major histocompatibility complex, class I, B 6 -31429627, -2770844, -2569111 D83043 6p21.3 Hs.707171 Hs.77961 1101

antigen processing and presentation of peptide antigen via MHC class I

protein binding

membrane fraction

plasma membrane

integral to plasma membrane

defense response

immune response

immune response

membrane

integral to membrane

antigen processing and presentation

MHC class I receptor activity

MHC class I protein complex

interspecies interaction between organisms

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

218911_at 0.472 5.179 2.277 3.762e-02 0.520 -3.798 YEATS4 YEATS domain containing 4 12 68039798 NM_006530 12q13-q15 Hs.4029 19

transcription factor activity

structural constituent of cytoskeleton

nucleus

nucleoplasm

mitosis

protein C-terminus binding

nuclear matrix

chromatin modification

NuA4 histone acetyltransferase complex

regulation of growth

histone H4 acetylation

histone H2A acetylation

positive regulation of transcription, DNA-dependent

 
223170_at 0.213 5.297 2.277 3.764e-02 0.520 -3.799 TMEM98 transmembrane protein 98 17 28279040 AF132000 17q11.2 Hs.3447 8

endoplasmic reticulum

membrane

integral to membrane

 
238793_at 0.371 4.670 2.277 3.765e-02 0.520 -3.799 TIGD7 tigger transposable element derived 7 16 -3288832 AI925903 16p13.3 Hs.708399 Hs.718663 4

chromosome, centromeric region

DNA binding

mRNA binding

nucleus

cytoplasm

ribonucleoprotein complex

regulation of transcription

 
229487_at 0.429 5.906 2.277 3.767e-02 0.520 -3.799 EBF1 early B-cell factor 1 5 -158055500 W73890 5q34 Hs.573143 21

DNA binding

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

transcription regulator activity

metal ion binding

 
209140_x_at 0.393 10.715 2.276 3.771e-02 0.520 -3.800 HLA-B major histocompatibility complex, class I, B 6 -31429627, -2770844, -2569111 L42024 6p21.3 Hs.707171 Hs.77961 1101

antigen processing and presentation of peptide antigen via MHC class I

protein binding

membrane fraction

plasma membrane

integral to plasma membrane

defense response

immune response

immune response

membrane

integral to membrane

antigen processing and presentation

MHC class I receptor activity

MHC class I protein complex

interspecies interaction between organisms

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

211795_s_at 0.154 3.926 2.276 3.772e-02 0.520 -3.800 FYB FYN binding protein (FYB-120/130) 5 -39141113 AF198052 5p13.1 Hs.370503 27

protein binding

nucleus

cytoplasm

protein amino acid phosphorylation

NLS-bearing substrate import into nucleus

immune response

signal transduction

protein kinase cascade

 
1552767_a_at -1.146 5.544 -2.276 3.773e-02 0.520 -3.800 HS6ST2 heparan sulfate 6-O-sulfotransferase 2 X -131587718 NM_147174 Xq26.2 Hs.385956 7

sulfotransferase activity

membrane

integral to membrane

transferase activity

Heparan sulfate biosynthesis

235484_at -0.385 5.464 -2.276 3.775e-02 0.520 -3.801 PTAR1 protein prenyltransferase alpha subunit repeat containing 1 9 -71514257 BE892889 9q21.12 Hs.719295 2

protein prenyltransferase activity

transferase activity

protein amino acid prenylation

 
1555797_a_at -0.337 5.171 -2.276 3.775e-02 0.520 -3.801 ARPC5 actin related protein 2/3 complex, subunit 5, 16kDa 1 -181861954 AF017807 1q25.3 Hs.518609 14

actin binding

structural constituent of cytoskeleton

protein binding

cytoplasm

Arp2/3 protein complex

cell motion

actin cytoskeleton organization

regulation of actin filament polymerization

cell projection

Fc gamma R-mediated phagocytosis

Regulation of actin cytoskeleton

Pathogenic Escherichia coli infection - EHEC

213477_x_at 0.620 11.975 2.275 3.776e-02 0.520 -3.801 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 6 -74282193 AL515273 6q14.1 Hs.520703 Hs.586423 Hs.644639 Hs.697944 Hs.708256 Hs.713109 86

nucleotide binding

translation elongation factor activity

GTPase activity

protein binding

GTP binding

cytoplasm

cytosol

eukaryotic translation elongation factor 1 complex

translational elongation

translational elongation

 
208449_s_at -0.189 5.057 -2.275 3.776e-02 0.520 -3.801 FGF8 fibroblast growth factor 8 (androgen-induced) 10 -103519876 NM_006119 10q24 Hs.57710 33

extracellular region

extracellular region

signal transduction

multicellular organismal development

gastrulation

growth factor activity

cell proliferation

fibroblast growth factor receptor signaling pathway

anatomical structure morphogenesis

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

234325_at -0.183 3.556 -2.275 3.776e-02 0.520 -3.801 C2orf65 chromosome 2 open reading frame 65 2 -74638517 Y12839 2p13.1 Hs.348645 3    
209960_at 0.266 2.695 2.275 3.777e-02 0.520 -3.801 HGF hepatocyte growth factor (hepapoietin A; scatter factor) 7 -81218151, -81209942, -81169379 X16323 7q21.1 Hs.396530 327

activation of MAPK activity

cell morphogenesis

epithelial to mesenchymal transition

liver development

catalytic activity

serine-type endopeptidase activity

protein binding

extracellular region

proteolysis

anti-apoptosis

mitosis

growth factor activity

platelet alpha granule lumen

hepatocyte growth factor receptor signaling pathway

myoblast proliferation

regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling

Cytokine-cytokine receptor interaction

Focal adhesion

Pathways in cancer

Renal cell carcinoma

Melanoma

1557553_at 0.438 6.886 2.275 3.778e-02 0.520 -3.802 PPP1R12B protein phosphatase 1, regulatory (inhibitor) subunit 12B 1 200584458, 200698493 BF438357 1q32.1 Hs.444403 14

cytoplasm

regulation of muscle contraction

signal transduction

enzyme activator activity

Vascular smooth muscle contraction

219334_s_at -0.173 2.299 -2.275 3.778e-02 0.520 -3.802 OBFC2A oligonucleotide/oligosaccharide-binding fold containing 2A 2 192251042, 192251105 NM_022837 2q32.3 Hs.591610 3

nucleic acid binding

nucleus

 
201178_at -0.234 7.494 -2.275 3.780e-02 0.520 -3.802 FBXO7 F-box protein 7 22 31200706, 31201223 NM_012179 22q12-q13 Hs.5912 19

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

ubiquitin-dependent protein catabolic process

regulation of protein stability

 
228026_at 0.425 6.671 2.274 3.783e-02 0.520 -3.803 SIKE1 suppressor of IKBKE 1 1 -115113627 AI983535 1p13.2 Hs.709277 6

cytoplasm

RIG-I-like receptor signaling pathway

222051_s_at 0.169 2.591 2.274 3.785e-02 0.520 -3.803 E2F5 E2F transcription factor 5, p130-binding 8 86276870, 86287161 AW139195 8q21.2 Hs.445758 25

transcription factor activity

nucleus

nucleoplasm

transcription factor complex

cytoplasm

regulation of transcription, DNA-dependent

transcription factor binding

organ morphogenesis

Cell cycle

TGF-beta signaling pathway

204417_at 0.245 6.447 2.274 3.787e-02 0.520 -3.804 GALC galactosylceramidase 14 -87499410, -87469110 NM_000153 14q31 Hs.513439 27

galactosylceramidase activity

lysosome

carbohydrate metabolic process

galactosylceramide catabolic process

metabolic process

hydrolase activity, acting on glycosyl bonds

cation binding

Sphingolipid metabolism

Metabolic pathways

Lysosome

221417_x_at 0.192 3.960 2.274 3.789e-02 0.520 -3.804 S1PR5 sphingosine-1-phosphate receptor 5 19 -10484622 NM_030760 19p13.2 Hs.501561 16

lysosphingolipid and lysophosphatidic acid receptor activity

receptor activity

G-protein coupled receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

integral to membrane

Neuroactive ligand-receptor interaction

213915_at 0.404 4.501 2.274 3.790e-02 0.520 -3.804 NKG7 natural killer cell group 7 sequence 19 -56566685 NM_005601 19q13.41 Hs.10306 4

integral to plasma membrane

membrane

 
201747_s_at -0.272 5.752 -2.273 3.792e-02 0.521 -3.805 SAFB scaffold attachment factor B 19 5574163 AI769566 19p13.3-p13.2 Hs.23978 38

nucleotide binding

DNA binding

double-stranded DNA binding

RNA binding

protein binding

nucleus

nucleolus

chromatin organization

regulation of transcription

 
239710_at 0.446 4.704 2.273 3.794e-02 0.521 -3.805 FIGN fidgetin 2 -164172363 AA993515 2q24.3 Hs.593650 4

nucleotide binding

ATP binding

nucleoside-triphosphatase activity

 
229204_at -0.364 5.855 -2.273 3.795e-02 0.521 -3.806 HP1BP3 heterochromatin protein 1, binding protein 3 1 -20941757 BE218428 1p36.12 Hs.142442 3

nucleosome

DNA binding

nucleus

chromosome

nucleosome assembly

 
206840_at -0.264 3.146 -2.272 3.798e-02 0.521 -3.806 AFM afamin 4 74566325 NM_001133 4q11-q13 Hs.168718 19

extracellular region

extracellular space

transport

 
201275_at 0.215 7.153 2.272 3.799e-02 0.521 -3.806 FDPS farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) 1 153545162, 153545328 NM_002004 1q22 Hs.335918 30

dimethylallyltranstransferase activity

geranyltranstransferase activity

cytoplasm

cholesterol biosynthetic process

isoprenoid biosynthetic process

transferase activity

interspecies interaction between organisms

Terpenoid backbone biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

204114_at 0.341 5.841 2.272 3.800e-02 0.521 -3.807 NID2 nidogen 2 (osteonidogen) 14 -51541269 NM_007361 14q21-q22 Hs.369840 15

calcium ion binding

collagen binding

extracellular region

basement membrane

cell adhesion

cell-matrix adhesion

bioluminescence

membrane

protein-chromophore linkage

 
238583_at -0.438 6.923 -2.272 3.803e-02 0.521 -3.807 MSRB3 methionine sulfoxide reductase B3 12 63958754 BG023974 12q14.3 Hs.339024 6

mitochondrion

endoplasmic reticulum

peptide-methionine-(S)-S-oxide reductase activity

zinc ion binding

oxidoreductase activity

metal ion binding

oxidation reduction

 
224189_x_at -0.192 3.719 -2.272 3.804e-02 0.521 -3.808 EHF ets homologous factor 11 34599243 AF124438 11p12 Hs.653859 19

transcription factor activity

protein binding

nucleus

multicellular organismal development

cell proliferation

epithelial cell differentiation

sequence-specific DNA binding

positive regulation of transcription, DNA-dependent

 
205872_x_at -0.456 11.364 -2.272 3.805e-02 0.521 -3.808 PDE4DIP phosphodiesterase 4D interacting protein 1 -143663117, -143663117, -143601947, -143601947, -143562783 NM_022359 1q12 Hs.584841 Hs.613082 Hs.657186 Hs.657490 Hs.719077 10

nucleus

cytoplasm

Golgi apparatus

centrosome

 
227438_at 0.271 5.751 2.271 3.807e-02 0.521 -3.808 ALPK1 alpha-kinase 1 4 113437947 AI760166 4q25 Hs.652825 10

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

kinase activity

transferase activity

 
220228_at -0.211 2.809 -2.271 3.809e-02 0.521 -3.809 AP4E1 adaptor-related protein complex 4, epsilon 1 subunit 15 48988237 AB030653 15q21.2 Hs.413366 6

structural molecule activity

protein binding

Golgi apparatus

intracellular protein transport

vesicle-mediated transport

membrane coat

COPI vesicle coat

Lysosome

1561927_at 0.145 2.690 2.271 3.811e-02 0.521 -3.809 C3orf16 chromosome 3 open reading frame 16 3 -150961581 AK027233 3q25.1 Hs.665988 3    
229414_at -0.233 4.860 -2.270 3.815e-02 0.522 -3.810 PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 17 62804385 AI676095 17q24.2 Hs.591185 Hs.696160 8

protein binding

intracellular

cytoplasm

lipid transport

signal transduction

lipid binding

phosphatidylinositol transporter activity

 
221283_at 0.240 5.074 2.270 3.817e-02 0.522 -3.810 RUNX2 runt-related transcription factor 2 6 45404031, 45497891 NM_004348 6p21 Hs.535845 152

osteoblast differentiation

transcription factor activity

RNA polymerase II transcription factor activity

protein binding

ATP binding

nucleus

regulation of transcription, DNA-dependent

negative regulation of transcription

transcription activator activity

 
200681_at -0.355 10.173 -2.270 3.818e-02 0.522 -3.811 GLO1 glyoxalase I 6 -38751679 NM_006708 6p21.3-p21.1 Hs.268849 46

lactoylglutathione lyase activity

cytoplasm

carbohydrate metabolic process

anti-apoptosis

anti-apoptosis

anti-apoptosis

zinc ion binding

lyase activity

metal ion binding

Pyruvate metabolism

221814_at 0.249 4.906 2.269 3.824e-02 0.522 -3.812 GPR124 G protein-coupled receptor 124 8 37773581 BF511315 8p11.23 Hs.274136 9

G-protein coupled receptor activity

G-protein coupled receptor activity

protein binding

plasma membrane

neuropeptide signaling pathway

integral to membrane

integral to membrane

 
240039_at -0.240 4.873 -2.269 3.826e-02 0.523 -3.812 PLA2R1 phospholipase A2 receptor 1, 180kDa 2 -160510571, -160506257 T79636 2q23-q24 Hs.410477 9

receptor activity

binding

sugar binding

extracellular region

extracellular space

plasma membrane

integral to plasma membrane

endocytosis

 
204404_at -0.519 5.974 -2.269 3.826e-02 0.523 -3.813 SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporters), member 2 5 127447381 NM_001046 5q23.3 Hs.162585 Hs.712970 29

transporter activity

membrane fraction

integral to plasma membrane

ion transport

potassium ion transport

sodium ion transport

sodium:potassium:chloride symporter activity

symporter activity

membrane

transepithelial chloride transport

potassium ion binding

sodium ion binding

ammonia transporter activity

transepithelial ammonium transport

Vibrio cholerae infection

231951_at 0.248 6.307 2.268 3.832e-02 0.523 -3.814 GNAO1 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O 16 54782751, 54782751 AL512686 16q13 Hs.644524 52

nucleotide binding

GTPase activity

signal transducer activity

GTP binding

intracellular

muscle contraction

signal transduction

dopamine receptor signaling pathway

locomotory behavior

regulation of heart contraction

cellular process

guanyl nucleotide binding

Long-term depression

Melanogenesis

213353_at -0.380 7.885 -2.268 3.833e-02 0.523 -3.814 ABCA5 ATP-binding cassette, sub-family A (ABC1), member 5 17 -64752170, -64752170 BF693921 17q24.3 Hs.421474 11

nucleotide binding

ATP binding

lysosome

endosome

Golgi apparatus

transport

membrane

integral to membrane

ATPase activity

ABC transporters

223663_at -0.189 6.376 -2.267 3.835e-02 0.523 -3.814 CCDC88B coiled-coil domain containing 88B 11 63864270 AL136799 11q12.3 Hs.98564 5    
205370_x_at 0.250 9.203 2.267 3.838e-02 0.523 -3.815 DBT dihydrolipoamide branched chain transacylase E2 1 -100425065 NM_001918 1p31 Hs.709187 34

protein binding

mitochondrion

mitochondrial alpha-ketoglutarate dehydrogenase complex

metabolic process

acyltransferase activity

transferase activity

lipoic acid binding

mitochondrial nucleoid

dihydrolipoyllysine-residue (2-methylpropanoyl)transferase activity

acyl-CoA biosynthetic process

cofactor binding

Valine, leucine and isoleucine degradation

Metabolic pathways

239482_x_at 0.234 5.646 2.267 3.838e-02 0.523 -3.815 ZNF708 zinc finger protein 708 19 -21265802 BF223715 19p12 Hs.466296 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
207384_at -0.181 6.358 -2.267 3.839e-02 0.523 -3.816 PGLYRP1 peptidoglycan recognition protein 1 19 -51214280 NM_005091 19q13.2-q13.3 Hs.137583 15

protein binding

extracellular region

bacterial binding

N-acetylmuramoyl-L-alanine amidase activity

peptidoglycan catabolic process

peptidoglycan receptor activity

detection of bacterium

innate immune response

defense response to Gram-positive bacterium

 
220087_at -0.212 3.780 -2.266 3.844e-02 0.524 -3.817 BCMO1 beta-carotene 15,15'-monooxygenase 1 16 79829796 NM_017429 16q21-q23 Hs.212172 11

beta-carotene 15,15'-monooxygenase activity

iron ion binding

oxidoreductase activity

oxidation reduction

Retinol metabolism

Metabolic pathways

221543_s_at 0.281 7.409 2.266 3.849e-02 0.524 -3.818 ERLIN2 ER lipid raft associated 2 8 37713254, 37713254, 37713356 AL442077 8p11.2 Hs.705490 13

molecular_function

cytoplasm

endoplasmic reticulum

endoplasmic reticulum membrane

biological_process

membrane

integral to membrane

 
224854_s_at 0.338 6.276 2.265 3.852e-02 0.524 -3.818 SLAIN2 SLAIN motif family, member 2 4 48038369 AI979301 4p11 Hs.479677 5    
218962_s_at 0.199 6.525 2.265 3.855e-02 0.524 -3.819 TMEM168 transmembrane protein 168 7 -112193022 NM_022484 7q31.32 Hs.709689 7

membrane

integral to membrane

transport vesicle

 
244740_at 0.714 6.242 2.264 3.857e-02 0.525 -3.819 MGC9913 hypothetical protein MGC9913 19   BE855713 19q13.43 Hs.23133 1    
223274_at 0.167 4.763 2.264 3.860e-02 0.525 -3.820 TCF19 transcription factor 19 6 31234281, 2577566, 2376100 BC002493 6p21.3 Hs.584807 9

transcription factor activity

protein binding

nucleus

regulation of transcription from RNA polymerase II promoter

zinc ion binding

cell proliferation

regulation of transcription

metal ion binding

 
209882_at -0.267 5.477 -2.264 3.861e-02 0.525 -3.820 RIT1 Ras-like without CAAX 1 1 -154134224 AF084462 1q22 Hs.491234 17

nucleotide binding

calmodulin binding

GTP binding

intracellular

plasma membrane

signal transduction

small GTPase mediated signal transduction

small GTPase mediated signal transduction

 
211678_s_at -0.326 8.537 -2.264 3.861e-02 0.525 -3.821 RNF114 ring finger protein 114 20 47986320 AF090934 20q13.13 Hs.144949 9

protein binding

intracellular

multicellular organismal development

spermatogenesis

zinc ion binding

cell differentiation

metal ion binding

 
208147_s_at 0.241 2.458 2.264 3.863e-02 0.525 -3.821 CYP2C8 cytochrome P450, family 2, subfamily C, polypeptide 8 10 -96786518 NM_030878 10q23.33 Hs.709188 97

monooxygenase activity

endoplasmic reticulum

microsome

electron carrier activity

membrane

heme binding

metal ion binding

oxidation reduction

aromatase activity

Arachidonic acid metabolism

Linoleic acid metabolism

Retinol metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

Metabolic pathways

208381_s_at 0.236 4.247 2.264 3.863e-02 0.525 -3.821 SGPL1 sphingosine-1-phosphate lyase 1 10 72245709 NM_003901 10q21 Hs.499984 14

vasculogenesis

kidney development

endoplasmic reticulum

lipid metabolic process

ceramide metabolic process

nitrogen compound metabolic process

apoptosis

sphinganine-1-phosphate aldolase activity

post-embryonic development

fibroblast migration

membrane

integral to membrane

lyase activity

carboxy-lyase activity

carboxylic acid metabolic process

hemopoiesis

sphingolipid catabolic process

pyridoxal phosphate binding

integral to endoplasmic reticulum membrane

regulation of multicellular organism growth

platelet-derived growth factor receptor signaling pathway

skeletal system morphogenesis

palate development

face morphogenesis

Sphingolipid metabolism

Metabolic pathways

228311_at -0.361 6.199 -2.263 3.867e-02 0.525 -3.822 BCL6B B-cell CLL/lymphoma 6, member B (zinc finger protein) 17 6867092 AI827455 17p13.1 Hs.22575 8

negative regulation of transcription from RNA polymerase II promoter

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

transcription repressor activity

metal ion binding

 
216049_at -0.275 2.824 -2.263 3.868e-02 0.525 -3.822 RHOBTB3 Rho-related BTB domain containing 3 5 95092605 AK023621 5q15 Hs.445030 13

protein binding

ATP binding

ATPase activity

Rab GTPase binding

retrograde transport, endosome to Golgi

 
208923_at 0.388 8.287 2.263 3.869e-02 0.525 -3.822 CYFIP1 cytoplasmic FMR1 interacting protein 1 15 20444124, 20507195 BC005097 15q11 Hs.26704 13

ruffle

protein binding

protein binding

cytoplasm

multicellular organismal development

nervous system development

regulation of cell shape

synaptosome

lamellipodium

lamellipodium assembly

cell junction

cell differentiation

ruffle organization

synapse

Rac GTPase binding

perinuclear region of cytoplasm

axon extension

actin filament binding

Regulation of actin cytoskeleton

209303_at 0.276 10.252 2.263 3.869e-02 0.525 -3.822 NDUFS4 NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase) 5 52892221 BC005270 5q11.1 Hs.528222 28

regulation of protein amino acid phosphorylation

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

oxygen and reactive oxygen species metabolic process

transport

brain development

NADH dehydrogenase (ubiquinone) activity

membrane

oxidoreductase activity, acting on NADH or NADPH

cAMP-mediated signaling

electron transport chain

mitochondrial respiratory chain complex I assembly

cellular respiration

positive regulation of fibroblast proliferation

response to cAMP

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

219811_at 0.212 6.849 2.263 3.870e-02 0.525 -3.823 DGCR8 DiGeorge syndrome critical region gene 8 22 18447833 NM_022720 22q11.2 Hs.643452 Hs.713579 21

double-stranded RNA binding

protein binding

intracellular

nucleus

cytoplasm

primary microRNA processing

 
233169_at 0.180 3.693 2.263 3.871e-02 0.525 -3.823 ZNF350 zinc finger protein 350 19 -57159404 AU145915 19q13.41 Hs.407694 23

DNA binding

protein binding

intracellular

nucleus

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

zinc ion binding

nuclear matrix

negative regulation of transcription

transcription repressor activity

transcriptional repressor complex

metal ion binding

 
204984_at -0.456 7.219 -2.262 3.874e-02 0.525 -3.823 GPC4 glypican 4 X -132262729 NM_001448 Xq26.1 Hs.58367 12

extracellular region

proteinaceous extracellular matrix

extracellular space

plasma membrane

integral to plasma membrane

cell proliferation

anatomical structure morphogenesis

anchored to membrane

heparan sulfate proteoglycan binding

 
205944_s_at 0.244 7.683 2.262 3.879e-02 0.525 -3.824 CLTCL1 clathrin, heavy chain-like 1 22 -17546988 NM_007098 22q11.2 22q11.21 Hs.368266 15

signal transducer activity

structural molecule activity

protein binding

intracellular protein transport

receptor-mediated endocytosis

anatomical structure morphogenesis

membrane

vesicle-mediated transport

clathrin coat of trans-Golgi network vesicle

clathrin coat of coated pit

cytoplasmic vesicle

Lysosome

Endocytosis

Huntington's disease

225605_at -0.214 6.481 -2.261 3.880e-02 0.525 -3.825 TP53I13 tumor protein p53 inducible protein 13 17 24919864 AL540867 17q11.2 Hs.514050 4

cytoplasm

plasma membrane

integral to membrane

 
234687_x_at 0.199 6.971 2.261 3.880e-02 0.525 -3.825 LIMD1 LIM domains containing 1 3 45611326 M80651 3p21.3 Hs.193370 Hs.621057 14

protein binding

regulation of transcription, DNA-dependent

signal transduction

multicellular organismal development

zinc ion binding

metal ion binding

 
201989_s_at -0.219 6.877 -2.261 3.882e-02 0.525 -3.825 CREBL2 cAMP responsive element binding protein-like 2 12 12656097 AL529409 12p13 Hs.591156 5

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

cell cycle

signal transduction

sequence-specific DNA binding

protein dimerization activity

 
228556_at -0.211 6.124 -2.261 3.883e-02 0.525 -3.825 YTHDC1 YTH domain containing 1 4 -68858699 AI990739 4q13.2 Hs.175955 18

nucleus

mRNA processing

RNA splicing

 
205956_x_at 0.231 6.369 2.261 3.885e-02 0.526 -3.826 PSMC3IP PSMC3 interacting protein 17 -37977854 NM_013290 17q12-q21 Hs.383019 9

molecular_function

DNA binding

protein binding

cellular_component

nucleus

DNA recombination

meiosis

biological_process

 
1559759_at 0.219 4.305 2.260 3.889e-02 0.526 -3.827 KIFC3 kinesin family member C3 16 -56349629, -56349629 BE407830 16q13-q21 Hs.23131 10

nucleotide binding

microtubule motor activity

ATP binding

Golgi apparatus

kinesin complex

microtubule

microtubule-based movement

Golgi organization

visual perception

 
220401_at 0.219 2.457 2.260 3.889e-02 0.526 -3.827 FLJ21369 hypothetical protein FLJ21369 19   NM_024802 19q13.11 Hs.529098      
1569032_at 0.212 4.074 2.259 3.895e-02 0.526 -3.828 LOC642852 hypothetical LOC642852 21 45532394 BC033767 21q22.3 Hs.11637 Hs.676029 Hs.710382 2    
238994_at -0.292 5.652 -2.259 3.897e-02 0.526 -3.829 OTUD7B OTU domain containing 7B 1 -148178855 AW022496 1q21.2 Hs.98322 11

DNA binding

ubiquitin thiolesterase activity

protein binding

nucleus

cytoplasm

peptidase activity

cysteine-type peptidase activity

zinc ion binding

protein deubiquitination

modification-dependent protein catabolic process

negative regulation of I-kappaB kinase/NF-kappaB cascade

metal ion binding

 
200989_at 0.322 7.856 2.259 3.900e-02 0.526 -3.829 HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 14 61231871 NM_001530 14q21-q24 Hs.597216 743

response to hypoxia

neural crest cell migration

epithelial to mesenchymal transition

embryonic placenta development

positive regulation of endothelial cell proliferation

heart looping

connective tissue replacement during inflammatory response

RNA polymerase II transcription factor activity, enhancer binding

signal transducer activity

nucleus

transcription factor complex

nucleolus

cytoplasm

lactate metabolic process

regulation of transcription, DNA-dependent

cellular iron ion homeostasis

signal transduction

transcription factor binding

microtubule-based flagellum

positive regulation vascular endothelial growth factor production

positive regulation of epithelial cell migration

response to muscle activity

cell differentiation

positive regulation of vascular endothelial growth factor receptor signaling pathway

oxygen homeostasis

positive regulation of chemokine production

regulation of transforming growth factor-beta2 production

collagen metabolic process

histone acetyltransferase binding

embryonic hemopoiesis

hemoglobin biosynthetic process

glucose homeostasis

mRNA transcription from RNA polymerase II promoter

regulation of apoptosis

positive regulation of gene-specific transcription

sequence-specific DNA binding

regulation of transcription from RNA polymerase II promoter in response to oxidative stress

positive regulation of erythrocyte differentiation

positive regulation of angiogenesis

positive regulation of glycolysis

negative regulation of growth

positive regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

muscle maintenance

positive regulation of hormone biosynthetic process

protein heterodimerization activity

protein heterodimerization activity

regulation of catalytic activity

positive regulation of nitric-oxide synthase activity

cartilage development

elastin metabolic process

Hsp90 protein binding

mTOR signaling pathway

Pathways in cancer

Renal cell carcinoma

209036_s_at 0.183 12.037 2.259 3.901e-02 0.526 -3.829 MDH2 malate dehydrogenase 2, NAD (mitochondrial) 7 75515328 BC001917 7cen-q22 Hs.520967 26

binding

mitochondrion

mitochondrial inner membrane

mitochondrial matrix

mitochondrial matrix

glycolysis

tricarboxylic acid cycle

malate metabolic process

malate metabolic process

oxidoreductase activity

L-malate dehydrogenase activity

L-malate dehydrogenase activity

L-malate dehydrogenase activity

cellular carbohydrate metabolic process

oxidation reduction

Citrate cycle (TCA cycle)

Pyruvate metabolism

Glyoxylate and dicarboxylate metabolism

Carbon fixation in photosynthetic organisms

Reductive carboxylate cycle (CO2 fixation)

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

207250_at -0.179 3.737 -2.259 3.901e-02 0.526 -3.829 SIX6 SIX homeobox 6 14 60045690 NM_007374 14q22.3-q23 Hs.194756 10

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

visual perception

organ morphogenesis

sequence-specific DNA binding

 
225138_at -0.387 7.678 -2.259 3.902e-02 0.526 -3.829 ZRANB1 zinc finger, RAN-binding domain containing 1 10 126620681 N52625 10q26.13 Hs.595158 3

ubiquitin-protein ligase activity

protein binding

intracellular

nucleus

cytoplasm

peptidase activity

cysteine-type peptidase activity

zinc ion binding

modification-dependent protein catabolic process

positive regulation of Wnt receptor signaling pathway

metal ion binding

 
209410_s_at -1.131 7.105 -2.258 3.902e-02 0.526 -3.829 GRB10 growth factor receptor-bound protein 10 7 -50625253, -50625253, -50625253 AF000017 7p12-p11.2 Hs.164060 51

SH3/SH2 adaptor activity

insulin receptor binding

protein binding

cytoplasm

plasma membrane

signal transduction

cell-cell signaling

negative regulation of glucose import

negative regulation of insulin receptor signaling pathway

 
1564112_at 0.179 6.060 2.258 3.908e-02 0.527 -3.831 FAM71A family with sequence similarity 71, member A 1 210864438 AK097437 1q32.3 Hs.129293 4    
1562239_at 0.255 4.648 2.258 3.909e-02 0.527 -3.831 SGSM1 small G protein signaling modulator 1 22 23532135 AB075821 22q11.23 Hs.474397 Hs.620906 5

Rab GTPase activator activity

intracellular

Golgi apparatus

regulation of Rab GTPase activity

 
212549_at -0.346 7.854 -2.257 3.910e-02 0.527 -3.831 STAT5B signal transducer and activator of transcription 5B 17 -37604720 BE645861 17q11.2 Hs.719121 128

allantoin metabolic process

luteinization

natural killer cell differentiation

transcription factor activity

signal transducer activity

calcium ion binding

protein binding

nucleus

cytoplasm

citrate metabolic process

2-oxoglutarate metabolic process

succinate metabolic process

oxaloacetate metabolic process

isoleucine metabolic process

valine metabolic process

creatine metabolic process

fatty acid metabolic process

signal transduction

female pregnancy

lactation

positive regulation of cell proliferation

regulation of steroid metabolic process

cytokine-mediated signaling pathway

taurine metabolic process

lipid storage

regulation of cell adhesion

regulation of epithelial cell differentiation

response to estradiol stimulus

cellular response to hormone stimulus

T cell differentiation in the thymus

glucocorticoid receptor binding

positive regulation of multicellular organism growth

positive regulation of activated T cell proliferation

progesterone metabolic process

T cell homeostasis

negative regulation of apoptosis

positive regulation of interleukin-2 biosynthetic process

positive regulation of B cell differentiation

positive regulation of gamma-delta T cell differentiation

negative regulation of erythrocyte differentiation

positive regulation of survival gene product expression

positive regulation of mitotic cell cycle

positive regulation of transcription from RNA polymerase II promoter

creatinine metabolic process

development of secondary female sexual characteristics

development of secondary male sexual characteristics

Peyer's patch development

positive regulation of inflammatory response

JAK-STAT cascade involved in growth hormone signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

Jak-STAT signaling pathway

Pathways in cancer

Chronic myeloid leukemia

Acute myeloid leukemia

1552785_at 0.240 2.742 2.257 3.910e-02 0.527 -3.831 ZNF781 zinc finger protein 781 19 -42850489 NM_152605 19q13.12 Hs.116622 1

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
244587_at 0.185 6.545 2.257 3.913e-02 0.527 -3.832 ATF7 activating transcription factor 7 12 -52192109, -52192109 AA534039 12q13 Hs.12286 18

transcription factor activity

intracellular

nucleus

cytoplasm

regulation of transcription, DNA-dependent

zinc ion binding

sequence-specific DNA binding

metal ion binding

protein dimerization activity

 
225142_at -0.310 4.285 -2.257 3.913e-02 0.527 -3.832 JHDM1D jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae) 7 -139431014 AW294022 7q34 Hs.308710 3

protein binding

zinc ion binding

metal ion binding

 
219178_at 0.280 3.635 2.257 3.915e-02 0.527 -3.832 QTRTD1 queuine tRNA-ribosyltransferase domain containing 1 3 115258300 NM_024638 3q13.31 Hs.477162 2

mitochondrion

zinc ion binding

queuine tRNA-ribosyltransferase activity

queuosine biosynthetic process

transferase activity, transferring glycosyl groups

metal ion binding

 
218468_s_at -0.498 3.415 -2.257 3.915e-02 0.527 -3.832 GREM1 gremlin 1, cysteine knot superfamily, homolog (Xenopus laevis) 15 30797496 AF154054 15q13-q15 Hs.40098 28

cytokine activity

protein binding

extracellular region

extracellular space

multicellular organismal development

nervous system development

 
223629_at -0.298 4.087 -2.256 3.919e-02 0.527 -3.833 PCDHB5 protocadherin beta 5 5 140494983 BC001186 5q31 Hs.119693 11

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

synaptic transmission

synaptogenesis

integral to membrane

calcium-dependent cell-cell adhesion

 
219115_s_at 0.314 2.752 2.256 3.924e-02 0.527 -3.834 IL20RA interleukin 20 receptor, alpha 6 -137362800 NM_014432 6q22.33-q23.1 Hs.445868 15

receptor activity

cytokine receptor activity

membrane

integral to membrane

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

221022_s_at 0.170 5.485 2.255 3.924e-02 0.527 -3.834 PMFBP1 polyamine modulated factor 1 binding protein 1 16 -70710497, -70710497 NM_031293 16q22.2 Hs.714939 10

cytoplasm

 
209695_at 0.371 9.858 2.255 3.927e-02 0.527 -3.835 PTP4A3 protein tyrosine phosphatase type IVA, member 3 8 142501188 BC003105 8q24.3 Hs.43666 45

prenylated protein tyrosine phosphatase activity

early endosome

plasma membrane

protein amino acid dephosphorylation

hydrolase activity

identical protein binding

 
205164_at 0.263 6.977 2.255 3.927e-02 0.527 -3.835 GCAT glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase) 22 36533900 NM_014291 22q13.1 Hs.54609 6

mitochondrion

mitochondrial inner membrane

cellular amino acid metabolic process

acyltransferase activity

glycine C-acetyltransferase activity

biosynthetic process

transferase activity, transferring nitrogenous groups

pyridoxal phosphate binding

Glycine, serine and threonine metabolism

209746_s_at -0.210 7.095 -2.255 3.927e-02 0.527 -3.835 COQ7 coenzyme Q7 homolog, ubiquinone (yeast) 16 18986427 AF032900 16p13.11-p12.3 Hs.157113 18

iron ion binding

nucleus

mitochondrion

ubiquinone biosynthetic process

oxidoreductase activity

protein metabolic process

Ubiquinone and other terpenoid-quinone biosynthesis

Metabolic pathways

206218_at -0.264 3.697 -2.255 3.930e-02 0.527 -3.836 MAGEB2 melanoma antigen family B, 2 X 30143595 NM_002364 Xp21.3 Hs.113824 12

protein binding

 
225044_at 0.255 7.299 2.255 3.931e-02 0.527 -3.836 NT5C3L 5'-nucleotidase, cytosolic III-like 17 -37234948 AL526783 17q21.2 Hs.237536 1

nucleotide binding

magnesium ion binding

cytoplasm

5'-nucleotidase activity

nucleotide metabolic process

transferase activity

hydrolase activity

 
225578_at -0.436 7.671 -2.255 3.931e-02 0.527 -3.836 C13orf37 chromosome 13 open reading frame 37 13 -72180495 AI885466 13q21.33-q22.1 Hs.28465 1    
210038_at -0.395 10.013 -2.255 3.931e-02 0.527 -3.836 PRKCQ protein kinase C, theta 10 -6509110 AL137145 10p15 Hs.498570 112

nucleotide binding

magnesium ion binding

regulation of cell growth

protein kinase C activity

protein binding

ATP binding

intracellular

protein amino acid phosphorylation

membrane protein ectodomain proteolysis

intracellular signaling cascade

zinc ion binding

transferase activity

diacylglycerol binding

Vascular smooth muscle contraction

Tight junction

T cell receptor signaling pathway

Adipocytokine signaling pathway

211937_at -0.196 8.042 -2.254 3.933e-02 0.527 -3.836 EIF4B eukaryotic translation initiation factor 4B 12 51686328 NM_001417 12q13.13 Hs.648394 Hs.702041 23

nucleotide binding

RNA binding

translation initiation factor activity

cytosol

translation

regulation of translational initiation

eukaryotic translation initiation factor 4F complex

mTOR signaling pathway

228984_at 0.411 8.080 2.254 3.934e-02 0.527 -3.837 ATPGD1 ATP-grasp domain containing 1 11 66939724 AB037815 11q13.2 Hs.502982 3

nucleotide binding

catalytic activity

ATP binding

manganese ion binding

metal ion binding

 
212523_s_at 0.223 3.874 2.254 3.934e-02 0.527 -3.837 KIAA0146 KIAA0146 8 48336094 D63480 8q11.21 Hs.381058 6    
231481_at 0.206 3.937 2.254 3.935e-02 0.527 -3.837 CCNB3 cyclin B3 X 50044279 AI003521 Xp11 Hs.130310 17

nucleus

nucleolus

cell cycle

meiosis

cell division

Cell cycle

p53 signaling pathway

219525_at -0.247 8.074 -2.254 3.935e-02 0.527 -3.837 SLC47A1 solute carrier family 47, member 1 17 19377758 NM_018242 17p11.2 Hs.232054 16

plasma membrane

transport

multidrug transport

drug transporter activity

antiporter activity

integral to membrane

 
202100_at -0.384 7.047 -2.254 3.936e-02 0.527 -3.837 RALB v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein) 2 120726883 BG169673 2cen-q13 Hs.469820 23

nucleotide binding

protein binding

GTP binding

intracellular

plasma membrane

Ras protein signal transduction

Pathways in cancer

Pancreatic cancer

213750_at -0.236 8.432 -2.254 3.939e-02 0.527 -3.838 RSL1D1 ribosomal L1 domain containing 1 16 -11835555 AA928506 16p13.13 Hs.401842 17

RNA binding

structural constituent of ribosome

protein binding

intracellular

nucleus

nucleolus

ribosome

RNA processing

translation

regulation of protein localization

 
1554544_a_at -0.409 7.086 -2.253 3.940e-02 0.527 -3.838 MBP myelin basic protein 18 -72853726, -72819776, -72819776 L18865 18q23 Hs.551713 102

plasma membrane

immune response

synaptic transmission

central nervous system development

structural constituent of myelin sheath

internode region of axon

myelination

cell projection

cell soma

myelin sheath

 
226897_s_at -0.368 5.631 -2.253 3.941e-02 0.527 -3.838 ZC3H7A zinc finger CCCH-type containing 7A 16 -11751942 AW169959 16p13-p12 Hs.371856 5

nucleic acid binding

intracellular

nucleus

zinc ion binding

metal ion binding

 
226474_at 0.307 5.782 2.253 3.944e-02 0.527 -3.839 NLRC5 NLR family, CARD domain containing 5 16 55580910 AA005023 16q13 Hs.528836 3

nucleotide binding

protein binding

ATP binding

cytoplasm

 
221476_s_at -0.314 10.485 -2.253 3.945e-02 0.527 -3.839 RPL15 ribosomal protein L15 3 23933642 AF279903 3p24.2 Hs.381219 Hs.695621 14

RNA binding

structural constituent of ribosome

intracellular

cytosol

ribosome

translational elongation

Ribosome

1568680_s_at 0.374 6.800 2.253 3.947e-02 0.527 -3.839 YTHDC2 YTH domain containing 2 5 112877308 BC019100 5q22.2 Hs.231942 6

nucleotide binding

nucleic acid binding

helicase activity

ATP binding

hydrolase activity

 
231114_at 0.419 2.627 2.252 3.952e-02 0.527 -3.840 SPATA22 spermatogenesis associated 22 17 -3290063 BF438413 17p13.3 Hs.351068 3    
230925_at 0.376 4.932 2.252 3.952e-02 0.527 -3.841 APBB1IP amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein 10 26767271 AI093231 10p12.1 Hs.310421 9

cytoplasm

cytoskeleton

plasma membrane

focal adhesion

signal transduction

lamellipodium

cell junction

 
232138_at 0.429 6.634 2.252 3.953e-02 0.527 -3.841 MBNL2 muscleblind-like 2 (Drosophila) 13 96672574 AW276914 13q32.1 Hs.657347 9

RNA binding

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
65635_at 0.208 7.621 2.252 3.954e-02 0.527 -3.841 ENGASE endo-beta-N-acetylglucosaminidase 17 74582613 AL044097 17q25.3 Hs.29288 5

intracellular

cytoplasm

cytosol

metabolic process

hydrolase activity, acting on glycosyl bonds

mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity

Other glycan degradation

210774_s_at -0.266 10.935 -2.252 3.954e-02 0.527 -3.841 NCOA4 nuclear receptor coactivator 4 10 51235113, 51242369, 51246290 AL162047 10q11.2 Hs.643658 Hs.709644 43

transcription coactivator activity

protein binding

nucleus

male gonad development

androgen receptor signaling pathway

regulation of transcription

positive regulation of transcription, DNA-dependent

androgen receptor binding

Pathways in cancer

Thyroid cancer

201496_x_at -0.482 5.813 -2.251 3.955e-02 0.527 -3.841 MYH11 myosin, heavy chain 11, smooth muscle 16 -15704492 S67238 16p13.11 Hs.460109 33

nucleotide binding

motor activity

actin binding

calmodulin binding

ATP binding

striated muscle thick filament

smooth muscle contraction

striated muscle contraction

structural constituent of muscle

myosin complex

muscle thick filament assembly

melanosome

elastic fiber assembly

cardiac muscle fiber development

Vascular smooth muscle contraction

Tight junction

201861_s_at 0.274 6.906 2.251 3.955e-02 0.527 -3.841 LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 2 238200962, 238265545, 238265545 BF965566 2q37.3 Hs.471779 16

DNA binding

double-stranded RNA binding

protein binding

nucleus

cytoplasm

cytoskeleton

regulation of transcription from RNA polymerase II promoter

negative regulation of transcription

transcription repressor activity

 
218309_at 0.230 7.017 2.251 3.955e-02 0.527 -3.841 CAMK2N1 calcium/calmodulin-dependent protein kinase II inhibitor 1 1 -20681470 NM_018584 1p36.12 Hs.197922 4

plasma membrane

calcium-dependent protein kinase inhibitor activity

postsynaptic density

synaptosome

protein kinase binding

cell junction

dendrite

cell soma

synapse

postsynaptic membrane

 
219237_s_at 0.244 6.182 2.251 3.957e-02 0.528 -3.842 DNAJB14 DnaJ (Hsp40) homolog, subfamily B, member 14 4 -101039734 NM_024920 4q23 Hs.577426 6

protein folding

membrane

integral to membrane

heat shock protein binding

unfolded protein binding

 
1557094_at -0.199 3.664 -2.251 3.959e-02 0.528 -3.842 LOC653110 hypothetical LOC653110 10   BC029890 10q11.22   2    
1556134_a_at -0.553 7.294 -2.249 3.970e-02 0.529 -3.844 B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 3 184453725 BC013229 3q28 Hs.718506 7

intracellular

Golgi apparatus

protein amino acid glycosylation

multicellular organismal development

central nervous system development

galactosyltransferase activity

beta-galactosyl-N-acetylglucosaminylgalactosylglucosyl-ceramide beta-1,3-acetylglucosaminyltransferase activity

lipopolysaccharide N-acetylglucosaminyltransferase activity

glycolipid biosynthetic process

membrane

integral to membrane

transferase activity, transferring glycosyl groups

Glycosphingolipid biosynthesis - lacto and neolacto series

Metabolic pathways

209505_at -0.238 2.644 -2.249 3.970e-02 0.529 -3.844 NR2F1 nuclear receptor subfamily 2, group F, member 1 5 92944798 AI951185 5q14 Hs.519445 28

negative regulation of transcription from RNA polymerase II promoter

neuron migration

transcription factor activity

ligand-regulated transcription factor activity

steroid hormone receptor activity

transcription coactivator activity

nucleus

regulation of transcription, DNA-dependent

signal transduction

nervous system development

zinc ion binding

forebrain development

sequence-specific DNA binding

metal ion binding

 
212428_at -0.363 9.043 -2.249 3.970e-02 0.529 -3.845 KIAA0368 KIAA0368 9 -113162793 AW001101 9q31.3 Hs.368255 12

proteasome complex

binding

nucleus

early endosome

late endosome

endoplasmic reticulum

ER-Golgi intermediate compartment

trans-Golgi network

centrosome

cytosol

cytoplasmic membrane-bounded vesicle

ER to Golgi transport vesicle

ER-associated protein catabolic process

 
244710_at -0.387 3.990 -2.249 3.972e-02 0.529 -3.845 LRGUK leucine-rich repeats and guanylate kinase domain containing 7 133462644 BE044261 7q33 Hs.149774 4

nucleotide binding

protein binding

ATP binding

kinase activity

transferase activity

 
241710_at 0.334 3.914 2.249 3.973e-02 0.529 -3.845 hCG_1645220 hCG1645220 2 -43755795 AI436290 2p21 Hs.602756 1    
204293_at 0.282 4.950 2.249 3.976e-02 0.529 -3.846 SGSH N-sulfoglucosamine sulfohydrolase 17 -75797673 NM_000199 17q25.3 Hs.31074 25

calcium ion binding

protein binding

lysosome

proteoglycan metabolic process

metabolic process

sulfuric ester hydrolase activity

N-sulfoglucosamine sulfohydrolase activity

hydrolase activity

glycosaminoglycan metabolic process

Glycosaminoglycan degradation

Metabolic pathways

Lysosome

227647_at 0.291 5.891 2.249 3.978e-02 0.529 -3.846 KCNE3 potassium voltage-gated channel, Isk-related family, member 3 11 -73843533 AI692703 11q13-q14 Hs.523899 24

voltage-gated ion channel activity

voltage-gated potassium channel activity

ion transport

potassium ion transport

membrane

integral to membrane

potassium ion binding

 
236314_at 0.267 5.271 2.248 3.978e-02 0.529 -3.846 EPM2AIP1 EPM2A (laforin) interacting protein 1 3 -37002361 AW162758 3p22.1 Hs.28020 8

endoplasmic reticulum

 
213614_x_at 0.705 11.708 2.248 3.979e-02 0.529 -3.846 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 6 -74282193 BE786672 6q14.1 Hs.520703 Hs.586423 Hs.644639 Hs.697944 Hs.708256 Hs.713109 86

nucleotide binding

translation elongation factor activity

GTPase activity

protein binding

GTP binding

cytoplasm

cytosol

eukaryotic translation elongation factor 1 complex

translational elongation

translational elongation

 
215605_at 0.246 5.076 2.248 3.983e-02 0.529 -3.847 NCOA2 nuclear receptor coactivator 2 8 -71186820 AU145806 8q13.3 Hs.446678 89

negative regulation of transcription from RNA polymerase II promoter

signal transducer activity

receptor binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

signal transduction

transcription repressor activity

thyroid hormone receptor coactivator activity

steroid hormone receptor signaling pathway

nuclear hormone receptor binding

positive regulation of transcription from RNA polymerase II promoter

 
220660_at -0.264 3.029 -2.248 3.984e-02 0.529 -3.847 C9orf27 chromosome 9 open reading frame 27 9 -117690364 NM_021208 9q31.3 Hs.23367 2

molecular_function

cellular_component

biological_process

 
1557331_at -0.196 4.699 -2.247 3.986e-02 0.529 -3.848 POLR1B polymerase (RNA) I polypeptide B, 128kDa 2 113015962 CA442932 2q13 Hs.86337 21

DNA binding

DNA-directed RNA polymerase activity

protein binding

nucleus

nucleoplasm

nucleolus

transcription

zinc ion binding

transferase activity

nucleotidyltransferase activity

ribonucleoside binding

metal ion binding

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

206748_s_at -0.201 4.397 -2.247 3.990e-02 0.530 -3.849 SPAG9 sperm associated antigen 9 17 -46394534 NM_003971 17q21.33 Hs.463439 22

acrosomal vesicle

protein binding

cytoplasm

spermatogenesis

integral to membrane

positive regulation of cell migration

perinuclear region of cytoplasm

 
201723_s_at -0.357 8.049 -2.247 3.991e-02 0.530 -3.849 GALNT1 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) 18 31488530 U41514 18q12.1 Hs.514806 26

polypeptide N-acetylgalactosaminyltransferase activity

calcium ion binding

sugar binding

extracellular region

Golgi apparatus

membrane

integral to membrane

transferase activity, transferring glycosyl groups

protein amino acid O-linked glycosylation via serine

protein amino acid O-linked glycosylation via threonine

manganese ion binding

perinuclear region of cytoplasm

O-Glycan biosynthesis

Metabolic pathways

232253_at 0.288 6.864 2.246 3.995e-02 0.530 -3.850 C5orf56 chromosome 5 open reading frame 56 5 131774571 AL564637 5q31.1 Hs.658288 1    
1559618_at 0.180 3.406 2.246 3.996e-02 0.530 -3.850 LOC100129447 hypothetical protein LOC100129447 12   BQ188678 12q24.13 Hs.661564 1    
207335_x_at 0.257 10.749 2.246 3.997e-02 0.530 -3.850 ATP5I ATP synthase, H+ transporting, mitochondrial F0 complex, subunit E 4 -656224 NM_007100 4p16.3 Hs.85539 14

mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)

mitochondrion

ion transport

hydrogen ion transmembrane transporter activity

ATP synthesis coupled proton transport

proton transport

membrane

ATPase activity

Oxidative phosphorylation

Metabolic pathways

230742_at 0.367 4.054 2.246 3.998e-02 0.530 -3.850 RBM6 RNA binding motif protein 6 3 49952595 AA742596 3p21.3 Hs.439480 12

DNA binding

RNA binding

intracellular

nucleus

RNA processing

zinc ion binding

 
208328_s_at 0.282 7.297 2.246 3.999e-02 0.530 -3.851 MEF2A myocyte enhancer factor 2A 15 97923655, 97990705 NM_005587 15q26 Hs.268675 77

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

apoptosis

multicellular organismal development

nervous system development

muscle organ development

cell differentiation

sequence-specific DNA binding

 
211399_at -0.190 4.849 -2.246 3.999e-02 0.530 -3.851 FGFR2 fibroblast growth factor receptor 2 10 -123231358, -123231358, -123227834, -123227834, -123227834, -123227834, -123227833 AB030077 10q26 Hs.533683 232

nucleotide binding

receptor activity

fibroblast growth factor receptor activity

protein binding

ATP binding

extracellular region

plasma membrane

plasma membrane

protein amino acid phosphorylation

heparin binding

fibroblast growth factor receptor signaling pathway

cell surface

integral to membrane

cell growth

transferase activity

MAPK signaling pathway

Endocytosis

Regulation of actin cytoskeleton

Pathways in cancer

Prostate cancer

230981_at 0.276 5.164 2.246 3.999e-02 0.530 -3.851 CATSPER3 cation channel, sperm associated 3 5 134331512 AI219834 5q31.1 Hs.631804 6

ciliary or flagellar motility

acrosomal vesicle

calcium activated cation channel activity

voltage-gated ion channel activity

calcium channel activity

calcium ion binding

protein binding

endoplasmic reticulum

plasma membrane

cilium

ion transport

sodium ion transport

calcium ion transport

multicellular organismal development

spermatogenesis

integral to membrane

flagellum

cell differentiation

sperm motility

 
202059_s_at -0.370 7.441 -2.246 4.000e-02 0.530 -3.851 KPNA1 karyopherin alpha 1 (importin alpha 5) 3 -123623437 NM_002264 3q21 Hs.161008 92

regulation of DNA recombination

protein binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

cytosol

NLS-bearing substrate import into nucleus

intracellular protein transport

nuclear localization sequence binding

protein transporter activity

interspecies interaction between organisms

 
202050_s_at -0.222 7.009 -2.245 4.008e-02 0.530 -3.853 ZMYM4 zinc finger, MYM-type 4 1 35507154 AI650586 1p32-p34 Hs.269211 7

DNA binding

nucleus

multicellular organismal development

zinc ion binding

metal ion binding

 
231845_at 0.168 5.932 2.244 4.008e-02 0.530 -3.853 AARS2 alanyl-tRNA synthetase 2, mitochondrial (putative) 6 -44374440 AI721172 6p21.1 Hs.158381 7

nucleotide binding

nucleic acid binding

alanine-tRNA ligase activity

ATP binding

cytoplasm

mitochondrion

mitochondrial matrix

translation

alanyl-tRNA aminoacylation

ligase activity

tRNA aminoacylation

Aminoacyl-tRNA biosynthesis

225377_at 0.405 7.538 2.244 4.009e-02 0.530 -3.853 C9orf86 chromosome 9 open reading frame 86 9 138822201 BE783949 9q34.3 Hs.370555 11

nucleotide binding

protein binding

GTP binding

nucleus

cytoplasm

small GTPase mediated signal transduction

 
214329_x_at 0.756 7.124 2.244 4.012e-02 0.531 -3.854 TNFSF10 tumor necrosis factor (ligand) superfamily, member 10 3 -173706157 AW474434 3q26 Hs.478275 343

cytokine activity

tumor necrosis factor receptor binding

extracellular region

extracellular space

soluble fraction

integral to plasma membrane

induction of apoptosis

immune response

signal transduction

cell-cell signaling

zinc ion binding

activation of pro-apoptotic gene products

membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

metal ion binding

Cytokine-cytokine receptor interaction

Apoptosis

Natural killer cell mediated cytotoxicity

214395_x_at -0.276 5.974 -2.244 4.015e-02 0.531 -3.854 EEF1D eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) 8 -144733040, -144733040 AI335509 8q24.3 Hs.333388 Hs.686554 42

translation elongation factor activity

signal transducer activity

protein binding

cytosol

eukaryotic translation elongation factor 1 complex

translational elongation

translational elongation

positive regulation of I-kappaB kinase/NF-kappaB cascade

 
209696_at 0.224 4.851 2.244 4.015e-02 0.531 -3.854 FBP1 fructose-1,6-bisphosphatase 1 9 -96405237, -96405237 D26054 9q22.3 Hs.494496 31

magnesium ion binding

fructose-2,6-bisphosphate 2-phosphatase activity

cytosol

carbohydrate metabolic process

fructose metabolic process

gluconeogenesis

hydrolase activity

fructose 1,6-bisphosphate 1-phosphatase activity

fructose 1,6-bisphosphate 1-phosphatase activity

phosphoric ester hydrolase activity

identical protein binding

Glycolysis / Gluconeogenesis

Pentose phosphate pathway

Fructose and mannose metabolism

Carbon fixation in photosynthetic organisms

Biosynthesis of phenylpropanoids

Metabolic pathways

Insulin signaling pathway

212263_at 0.346 9.746 2.243 4.017e-02 0.531 -3.854 QKI quaking homolog, KH domain RNA binding (mouse) 6 163755664, 163755664 AI114716 6q26 6q26-q27 Hs.510324 Hs.593520 23

RNA binding

protein binding

nucleus

nucleolus

cytoplasm

plasma membrane

mRNA processing

regulation of translation

transport

multicellular organismal development

RNA splicing

SH3 domain binding

cell differentiation

mRNA transport

 
226599_at 0.242 5.277 2.243 4.017e-02 0.531 -3.854 FHDC1 FH2 domain containing 1 4 154083584 AA527080 4q31.3 Hs.132629 5

actin binding

cellular component organization

actin cytoskeleton organization

 
222357_at -0.415 6.839 -2.243 4.021e-02 0.531 -3.855 ZBTB20 zinc finger and BTB domain containing 20 3 -115540212 AW974823 3q13.2 Hs.655108 13

DNA binding

protein binding

intracellular

nucleus

nucleolus

zinc ion binding

regulation of transcription

metal ion binding

 
217824_at -0.265 5.019 -2.243 4.021e-02 0.531 -3.856 UBE2J1 ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast) 6 -90093062 AW500009 6q15 Hs.163776 12

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

endoplasmic reticulum

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

Parkinson's disease

227577_at -0.429 6.640 -2.243 4.021e-02 0.531 -3.856 EXOC8 exocyst complex component 8 1 -229535104 AI168350 1q42.2 Hs.356198 11

protein binding

cytoplasm

exocytosis

protein transport

growth cone

cell projection

 
213461_at -0.348 3.270 -2.243 4.022e-02 0.531 -3.856 NUDT21 nudix (nucleoside diphosphate linked moiety X)-type motif 21 16 -55020548 AI800983 16q12.2 Hs.528834 26

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

centrosome

hydrolase activity

paraspeckles

 
204089_x_at 0.258 7.771 2.243 4.023e-02 0.531 -3.856 MAP3K4 mitogen-activated protein kinase kinase kinase 4 6 161332811 NM_006724 6q26 Hs.390428 20

nucleotide binding

activation of MAPKK activity

magnesium ion binding

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

ATP binding

response to stress

JNK cascade

transferase activity

MAPK signaling pathway

GnRH signaling pathway

1553863_at 0.189 3.056 2.242 4.024e-02 0.531 -3.856 WDFY4 WDFY family member 4 10 49563523 NM_173524 10q11.22-q11.23 Hs.287379 8

binding

membrane

integral to membrane

 
201947_s_at -0.305 8.984 -2.242 4.024e-02 0.531 -3.856 CCT2 chaperonin containing TCP1, subunit 2 (beta) 12 68265474 NM_006431 12q15 Hs.189772 19

nucleotide binding

ATP binding

nucleus

nucleolus

cytoplasm

cytosol

chaperonin-containing T-complex

protein folding

unfolded protein binding

 
214356_s_at -0.227 9.260 -2.242 4.029e-02 0.531 -3.857 KIAA0368 KIAA0368 9 -113162793 AI272899 9q31.3 Hs.368255 12

proteasome complex

binding

nucleus

early endosome

late endosome

endoplasmic reticulum

ER-Golgi intermediate compartment

trans-Golgi network

centrosome

cytosol

cytoplasmic membrane-bounded vesicle

ER to Golgi transport vesicle

ER-associated protein catabolic process

 
244353_s_at 0.346 6.558 2.241 4.034e-02 0.531 -3.858 SLC2A12 solute carrier family 2 (facilitated glucose transporter), member 12 6 -134350411 AI675682 6q23.2 Hs.486508 11

transporter activity

cytoplasm

carbohydrate transport

membrane

integral to membrane

substrate-specific transmembrane transporter activity

perinuclear region of cytoplasm

transmembrane transport

 
222187_x_at -0.434 6.627 -2.241 4.034e-02 0.531 -3.858 G3BP1 GTPase activating protein (SH3 domain) binding protein 1 5 151131668 X78262 5q33.1 Hs.587054 27

nucleotide binding

DNA binding

RNA binding

ATP-dependent DNA helicase activity

ATP-dependent RNA helicase activity

helicase activity

endonuclease activity

protein binding

ATP binding

intracellular

nucleus

cytoplasm

cytosol

plasma membrane

transport

Ras protein signal transduction

hydrolase activity

 
211844_s_at -0.191 2.626 -2.241 4.038e-02 0.531 -3.859 NRP2 neuropilin 2 2 206255468, 206255468, 206255468 AF022859 2q33.3 Hs.471200 44

receptor activity

vascular endothelial growth factor receptor activity

membrane fraction

plasma membrane

cell adhesion

multicellular organismal development

nervous system development

axon guidance

integral to membrane

cell differentiation

 
228323_at -0.362 3.685 -2.241 4.039e-02 0.531 -3.859 CASC5 cancer susceptibility candidate 5 15 38673738 BF248364 15q14 Hs.181855 16

acrosomal vesicle

acrosome assembly

protein binding

nucleus

 
222292_at 0.174 3.560 2.240 4.041e-02 0.531 -3.860 CD40 CD40 molecule, TNF receptor superfamily member 5 20 44180312 AW298127 20q12-q13.2 Hs.472860 290

receptor activity

extracellular region

plasma membrane

plasma membrane

integral to plasma membrane

protein complex assembly

inflammatory response

enzyme binding

platelet activation

B cell proliferation

positive regulation of I-kappaB kinase/NF-kappaB cascade

Cytokine-cytokine receptor interaction

Cell adhesion molecules (CAMs)

Toll-like receptor signaling pathway

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Primary immunodeficiency

211220_s_at -0.712 4.581 -2.240 4.042e-02 0.531 -3.860 HSF2 heat shock transcription factor 2 6 122762394 BC005329 6q22.31 Hs.158195 28

transcription factor activity

transcription coactivator activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

response to stress

spermatogenesis

protein homodimerization activity

sequence-specific DNA binding

 
1561434_at 0.233 3.507 2.240 4.046e-02 0.531 -3.861 C15orf45 chromosome 15 open reading frame 45 15   AI956139 15q13.3 Hs.711585 2    
202854_at 0.453 7.888 2.240 4.047e-02 0.531 -3.861 HPRT1 hypoxanthine phosphoribosyltransferase 1 X 133421840 NM_000194 Xq26.1 Hs.412707 104

magnesium ion binding

response to amphetamine

purine binding

hypoxanthine phosphoribosyltransferase activity

hypoxanthine phosphoribosyltransferase activity

soluble fraction

cytoplasm

cytosol

purine nucleotide biosynthetic process

purine ribonucleoside salvage

adenine salvage

guanine salvage

grooming behavior

nucleoside metabolic process

transferase activity, transferring glycosyl groups

cytolysis

striatum development

cerebral cortex neuron differentiation

central nervous system neuron development

protein homodimerization activity

positive regulation of dopamine metabolic process

hypoxanthine metabolic process

lymphocyte proliferation

dendrite morphogenesis

protein homotetramerization

Purine metabolism

Drug metabolism - other enzymes

Metabolic pathways

203327_at -0.294 8.398 -2.240 4.047e-02 0.531 -3.861 IDE insulin-degrading enzyme 10 -94203579 N22903 10q23-q25 Hs.500546 94

metalloendopeptidase activity

signal transducer activity

ATP binding

extracellular space

soluble fraction

cytoplasm

peroxisome

proteolysis

signal transduction

sex differentiation

peptidase activity

zinc ion binding

bradykinin catabolic process

protein homodimerization activity

metal ion binding

beta-amyloid metabolic process

Alzheimer's disease

238039_at 0.246 4.326 2.239 4.047e-02 0.531 -3.861 LOC728769 hypothetical protein LOC728769 5   BG180437 5q14.1 Hs.586193      
231815_at 0.376 5.695 2.239 4.049e-02 0.531 -3.861 PHF12 PHD finger protein 12 17 -24263287, -24256396 AB040956 17q11.2 Hs.714975 9

protein binding

nucleus

nucleolus

zinc ion binding

transcription repressor activity

transcriptional repressor complex

regulation of transcription

negative regulation of transcription, DNA-dependent

metal ion binding

 
225398_at -0.385 9.382 -2.239 4.050e-02 0.531 -3.862 RPUSD4 RNA pseudouridylate synthase domain containing 4 11 -125577199 AL580514 11q24.2 Hs.150458 5

pseudouridine synthesis

RNA binding

pseudouridine synthase activity

 
205633_s_at 0.689 8.371 2.239 4.050e-02 0.531 -3.862 ALAS1 aminolevulinate, delta-, synthase 1 3 52207155, 52207183 NM_000688 3p21.1 Hs.476308 24

5-aminolevulinate synthase activity

mitochondrion

mitochondrial matrix

heme biosynthetic process

acyltransferase activity

transferase activity, transferring nitrogenous groups

pyridoxal phosphate binding

tetrapyrrole biosynthetic process

Glycine, serine and threonine metabolism

Porphyrin and chlorophyll metabolism

Metabolic pathways

216526_x_at 0.410 9.841 2.239 4.052e-02 0.531 -3.862 HLA-C major histocompatibility complex, class I, C 6 -31344507, -2686290, -2483726 AK024836 6p21.3 Hs.654404 Hs.656020 Hs.77961 521

antigen processing and presentation of peptide antigen via MHC class I

extracellular region

plasma membrane

integral to plasma membrane

immune response

immune response

membrane

integral to membrane

antigen processing and presentation

MHC class I receptor activity

MHC class I protein complex

interspecies interaction between organisms

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

229089_at 0.219 5.952 2.239 4.053e-02 0.531 -3.862 ZNF509 zinc finger protein 509 4 4342824 BF061904 4p16.3 Hs.419997 3

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
239890_s_at 0.250 2.703 2.239 4.054e-02 0.531 -3.862 SERP2 stress-associated endoplasmic reticulum protein family member 2 13 43845977 BG054503 13q14.11 Hs.377972 4

endoplasmic reticulum

protein transport

membrane

integral to membrane

intracellular protein transmembrane transport

 
205134_s_at 0.354 5.321 2.238 4.060e-02 0.531 -3.864 NUFIP1 nuclear fragile X mental retardation protein interacting protein 1 13 -44411383 AW593143 13q14 Hs.525006 11

box C/D snoRNP assembly

DNA binding

intracellular

nucleus

perichromatin fibrils

nucleolus

RNA processing

transcription elongation factor complex

zinc ion binding

nuclear matrix

cytosolic ribosome

snoRNA binding

protein binding, bridging

identical protein binding

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

presynaptic active zone

pre-snoRNP complex

 
208400_at -0.180 3.455 -2.237 4.064e-02 0.531 -3.864 GLP1R glucagon-like peptide 1 receptor 6 39124534 U01157 6p21 Hs.389103 31

glucagon receptor activity

plasma membrane

response to stress

G-protein coupled receptor protein signaling pathway

activation of adenylate cyclase activity

elevation of cytosolic calcium ion concentration

learning or memory

regulation of heart contraction

peptide receptor activity, G-protein coupled

integral to membrane

cAMP-mediated signaling

insulin secretion

hormone secretion

Neuroactive ligand-receptor interaction

224827_at -0.367 6.243 -2.237 4.064e-02 0.531 -3.865 UBTD2 ubiquitin domain containing 2 5 -171569254 AK022894 5q35.1 Hs.131570 Hs.716824 7

cytoplasm

 
212403_at -0.294 7.503 -2.237 4.064e-02 0.531 -3.865 UBE3B ubiquitin protein ligase E3B 12 108399821 AI749193 12q24.11 Hs.374067 8

intracellular

protein modification process

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

Ubiquitin mediated proteolysis

214955_at 0.224 6.566 2.237 4.068e-02 0.531 -3.865 TMPRSS6 transmembrane protease, serine 6 22 -35791424 AI912086 22q12.3 Hs.370885 16

angiogenesis

serine-type endopeptidase activity

plasma membrane

proteolysis

intracellular signaling cascade

peptidase activity

integral to membrane

extracellular matrix organization

fibrinolysis

 
1555763_x_at -0.240 4.166 -2.237 4.068e-02 0.531 -3.866 MKL1 megakaryoblastic leukemia (translocation) 1 22 -39136237 AF364036 22q13 Hs.654688 37

nucleic acid binding

transcription coactivator activity

actin monomer binding

protein binding

nucleus

cytoplasm

anti-apoptosis

positive regulation of transcription

 
213568_at -0.302 5.388 -2.237 4.068e-02 0.531 -3.866 OSR2 odd-skipped related 2 (Drosophila) 8 100025806 AI811298 8q22.2 Hs.253247 6

nucleic acid binding

intracellular

nucleus

zinc ion binding

positive regulation of cell proliferation

metal ion binding

embryonic skeletal system morphogenesis

 
210080_x_at 0.209 4.463 2.237 4.070e-02 0.531 -3.866 CELA3A chymotrypsin-like elastase family, member 3A 1 22200735 D00306 1p36.12 Hs.654349 7

serine-type endopeptidase activity

proteolysis

digestion

cholesterol metabolic process

peptidase activity

 
212638_s_at -0.461 10.114 -2.236 4.072e-02 0.531 -3.866 WWP1 WW domain containing E3 ubiquitin protein ligase 1 8 87424109 BF131791 8q21 Hs.655189 30

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

intracellular

protein modification process

signal transduction

central nervous system development

negative regulation of transcription

protein ubiquitination

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

interspecies interaction between organisms

entry of virus into host cell

Ubiquitin mediated proteolysis

Endocytosis

218111_s_at -0.319 6.252 -2.236 4.072e-02 0.531 -3.866 CMAS cytidine monophosphate N-acetylneuraminic acid synthetase 12 22090425 NM_018686 12p12.1 Hs.311346 13

nucleus

N-acylneuraminate cytidylyltransferase activity

lipopolysaccharide biosynthetic process

transferase activity

nucleotidyltransferase activity

Amino sugar and nucleotide sugar metabolism

Metabolic pathways

215412_x_at 0.279 5.382 2.236 4.073e-02 0.531 -3.866 PMS2L2 postmeiotic segregation increased 2-like 2 pseudogene 7 -74815899, 72114615 AB017007 7q11-q22 Hs.292996 Hs.661055 Hs.675888 4

molecular_function

ATP binding

cellular_component

mismatch repair

biological_process

mismatched DNA binding

 
223347_at 0.185 6.287 2.236 4.073e-02 0.531 -3.867 MUM1 melanoma associated antigen (mutated) 1 19 1305975, 1307322 AL360266 19p13.3 Hs.515016 6    
228157_at 0.319 6.815 2.236 4.074e-02 0.531 -3.867 ZNF207 zinc finger protein 207 17 27701269 AI125646 17q11.2 Hs.500775 7

transcription factor activity

intracellular

nucleus

nucleolus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
218438_s_at -0.334 7.314 -2.236 4.074e-02 0.531 -3.867 MED28 mediator complex subunit 28 4 17225370 NM_025205 4p16 Hs.434075 Hs.644788 14

actin binding

protein binding

nucleus

cytoplasm

membrane

regulation of transcription

 
1556421_at -0.416 3.383 -2.236 4.076e-02 0.532 -3.867 LOC286189 hypothetical protein LOC286189 8   AI890196 8q13.1 Hs.593427 2    
201079_at -0.355 9.237 -2.235 4.080e-02 0.532 -3.868 SYNGR2 synaptogyrin 2 17 73676265 NM_004710 17q25.3 Hs.464210 Hs.708616 5

integral to plasma membrane

membrane

 
210103_s_at 0.285 3.847 2.235 4.081e-02 0.532 -3.868 FOXA2 forkhead box A2 20 -22509641, -22509641 AB028021 20p11 Hs.155651 35

ectoderm formation

RNA polymerase II transcription factor activity, enhancer binding

nucleus

regulation of transcription, DNA-dependent

pattern specification process

blood coagulation

anterior/posterior pattern formation

regulation of specific transcription from RNA polymerase II promoter

cell differentiation in hindbrain

dorsal/ventral neural tube patterning

lung development

epithelial cell differentiation

endocrine pancreas development

sequence-specific DNA binding

cell part

negative regulation of neuron differentiation

positive regulation of neuron differentiation

positive regulation of transcription from RNA polymerase II promoter

cell development

anatomical structure formation involved in morphogenesis

neuron fate specification

branching morphogenesis of a tube

Maturity onset diabetes of the young

213502_x_at 0.217 6.052 2.235 4.081e-02 0.532 -3.868 LOC91316 glucuronidase, beta/ immunoglobulin lambda-like polypeptide 1 pseudogene 22 -22310675 AA398569 22q11.23 Hs.148656 4    
211833_s_at 0.253 3.869 2.235 4.082e-02 0.532 -3.868 BAX BCL2-associated X protein 19 54149928, 54149928, 54149928 U19599 19q13.3-q13.4 Hs.624291 448

B cell apoptosis

B cell apoptosis

release of cytochrome c from mitochondria

cytoplasm

mitochondrion

mitochondrial outer membrane

mitochondrial permeability transition pore complex

endoplasmic reticulum

endoplasmic reticulum membrane

cytosol

cytosol

DNA fragmentation involved in apoptosis

cleavage of lamin

transformed cell apoptosis

mitochondrial fusion

lipid binding

induction of apoptosis by extracellular signals

induction of apoptosis by intracellular signals

negative regulation of survival gene product expression

activation of caspase activity by cytochrome c

response to toxin

establishment or maintenance of transmembrane electrochemical gradient

membrane

integral to membrane

nuclear fragmentation during apoptosis

release of matrix enzymes from mitochondria

protein homodimerization activity

protein homodimerization activity

regulation of apoptosis

regulation of protein homodimerization activity

regulation of protein heterodimerization activity

positive regulation of neuron apoptosis

mitochondrial fragmentation during apoptosis

induction of retinal programmed cell death

protein heterodimerization activity

protein homooligomerization

BH3 domain binding

regulation of mitochondrial membrane potential

p53 signaling pathway

Apoptosis

Neurotrophin signaling pathway

Amyotrophic lateral sclerosis (ALS)

Huntington's disease

Prion diseases

Pathways in cancer

Colorectal cancer

201066_at 0.212 11.243 2.235 4.083e-02 0.532 -3.869 CYC1 cytochrome c-1 8 145221947 NM_001916 8q24.3 Hs.289271 23

mitochondrion

mitochondrial inner membrane

transport

membrane

integral to membrane

heme binding

electron transport chain

electron transporter, transferring electrons from CoQH2-cytochrome c reductase complex and cytochrome c oxidase complex activity

metal ion binding

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Cardiac muscle contraction

Alzheimer's disease

Parkinson's disease

Huntington's disease

228513_at 0.219 5.399 2.234 4.087e-02 0.532 -3.869 TMEM219 transmembrane protein 219 16 29880851 AA496243 16p11.2 Hs.460574 1

membrane

integral to membrane

 
216750_at 0.231 4.585 2.234 4.089e-02 0.532 -3.870 APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 4 -40506801 AK024871 4p14-p13 Hs.479602 12

beta-amyloid binding

nucleus

cell cycle arrest

intracellular signaling cascade

transcription factor binding

membrane

lamellipodium

negative regulation of cell growth

growth cone

synapse

regulation of transcription

negative regulation of S phase of mitotic cell cycle

 
215017_s_at 0.207 7.729 2.234 4.091e-02 0.532 -3.870 FNBP1L formin binding protein 1-like 1 93686426 AW270932 1p22.1 Hs.134060 15

cytoplasm

cytoskeleton

plasma membrane

cell cortex

endocytosis

lipid binding

cytoplasmic vesicle

 
204778_x_at 0.247 6.252 2.234 4.092e-02 0.532 -3.871 HOXB7 homeobox B7 17 -44039593 AW102783 17q21.3 Hs.436181 39

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anterior/posterior pattern formation

myeloid cell differentiation

sequence-specific DNA binding

embryonic skeletal system morphogenesis

 
230630_at 0.221 4.187 2.234 4.093e-02 0.532 -3.871 AK3L1 adenylate kinase 3-like 1 1 65385819, 65386100, 65386473 AI566130 1p31.3 Hs.10862 Hs.592601 10

nucleotide binding

adenylate kinase activity

ATP binding

GTP binding

mitochondrion

mitochondrial matrix

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

transferase activity

Purine metabolism

Metabolic pathways

240349_at -0.315 5.553 -2.234 4.094e-02 0.532 -3.871 PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit 1 56883577 AV693202 1p31 Hs.437039 67

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

nucleoplasm

cytosol

protein amino acid phosphorylation

fatty acid biosynthetic process

cholesterol biosynthetic process

signal transduction

transferase activity

regulation of fatty acid oxidation

Regulation of autophagy

mTOR signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

Hypertrophic cardiomyopathy (HCM)

243045_at 0.314 7.291 2.233 4.096e-02 0.532 -3.871 SMYD1 SET and MYND domain containing 1 2 88148496 N75296 2p11.2 Hs.516176 8

DNA binding

nucleus

cytoplasm

zinc ion binding

regulation of transcription

metal ion binding

 
1552919_at 0.204 2.365 2.233 4.097e-02 0.532 -3.871 C4orf36 chromosome 4 open reading frame 36 4 -88016381 NM_144645 4q21.3 Hs.339646 4    
203311_s_at -0.299 7.503 -2.233 4.098e-02 0.532 -3.872 ARF6 ADP-ribosylation factor 6 14 49429485 M57763 14q21.3 Hs.525330 Hs.682124 86

nucleotide binding

ruffle

liver development

GTPase activity

protein binding

GTP binding

intracellular

membrane fraction

cytoplasm

endosome

Golgi apparatus

plasma membrane

cell cortex

apoptosis

cell motion

cell adhesion

small GTPase mediated signal transduction

protein transport

vesicle-mediated transport

positive regulation of actin filament polymerization

cortical actin cytoskeleton organization

ruffle organization

regulation of Rac protein signal transduction

negative regulation of receptor-mediated endocytosis

Endocytosis

Fc gamma R-mediated phagocytosis

230129_at -0.326 5.099 -2.233 4.101e-02 0.532 -3.872 PSTK phosphoseryl-tRNA kinase 10 124729545 BF589448 10q26.13 Hs.281004 4

nucleotide binding

magnesium ion binding

ATP binding

translation

kinase activity

transferase activity

phosphotransferase activity, alcohol group as acceptor

Aminoacyl-tRNA biosynthesis

221829_s_at 0.239 9.161 2.233 4.102e-02 0.532 -3.873 TNPO1 transportin 1 5 72148173, 72179685 AI307759 5q13.2 Hs.482497 58

protein import into nucleus, docking

protein import into nucleus, translocation

protein binding

nucleus

nuclear pore

cytoplasm

nuclear localization sequence binding

protein transporter activity

interspecies interaction between organisms

 
214077_x_at 0.307 4.459 2.232 4.103e-02 0.532 -3.873 MEIS3P1 Meis homeobox 3 pseudogene 1 17 15630888 H15129 17p12 Hs.356135 4

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

sequence-specific DNA binding

 
205512_s_at -0.296 8.186 -2.232 4.107e-02 0.533 -3.874 AIFM1 apoptosis-inducing factor, mitochondrion-associated, 1 X -129091019, -129091019, -129091018 NM_004208 Xq25-q26 Hs.424932 58

DNA binding

protein binding

nucleus

cytoplasm

mitochondrion

mitochondrial intermembrane space

DNA fragmentation involved in apoptosis

apoptosis

DNA damage response, signal transduction resulting in induction of apoptosis

electron carrier activity

oxidoreductase activity

cell redox homeostasis

FAD binding

oxidation reduction

Apoptosis

203616_at 0.323 9.693 2.231 4.110e-02 0.533 -3.874 POLB polymerase (DNA directed), beta 8 42315186 NM_002690 8p11.2 Hs.654484 95

magnesium ion binding

damaged DNA binding

DNA-directed DNA polymerase activity

DNA-directed DNA polymerase activity

nucleus

nucleoplasm

cytoplasm

spindle microtubule

DNA-dependent DNA replication

base-excision repair

pyrimidine dimer repair

anti-apoptosis

response to DNA damage stimulus

microtubule binding

cell death

transferase activity

nucleotidyltransferase activity

lyase activity

enzyme binding

sodium ion binding

Base excision repair

204729_s_at 0.240 6.046 2.231 4.111e-02 0.533 -3.875 STX1A syntaxin 1A (brain) 7 -72751475 NM_004603 7q11.23 Hs.647024 112

SNARE binding

positive regulation of neurotransmitter secretion

SNAP receptor activity

extracellular region

plasma membrane

plasma membrane

neurotransmitter transport

intracellular protein transport

synaptic transmission

response to gravity

integral to membrane

synaptic vesicle docking during exocytosis

vesicle-mediated transport

myosin binding

calcium ion-dependent exocytosis

calcium channel inhibitor activity

secretory granule

synaptic vesicle membrane

protein binding, bridging

myosin head/neck binding

actomyosin

ATP-dependent protein binding

positive regulation of exocytosis

protein heterodimerization activity

calcium-dependent protein binding

regulation of insulin secretion

SNARE interactions in vesicular transport

226961_at 0.241 3.995 2.231 4.114e-02 0.533 -3.875 PRR15 proline rich 15 7 29569951 AI347918 7p14.3 Hs.91109 3

multicellular organismal development

 
1554702_at 0.234 3.856 2.231 4.114e-02 0.533 -3.875 NALCN sodium leak channel, non-selective 13 -100504130 BC028390 13q32.3 Hs.525146 8

voltage-gated ion channel activity

sodium channel activity

ion transport

sodium ion transport

membrane

integral to membrane

sodium ion binding

 
206774_at 0.314 5.197 2.231 4.115e-02 0.533 -3.875 FRMPD1 FERM and PDZ domain containing 1 9 37641051 NM_014907 9p13.2 Hs.163990 4

protein binding

cytoplasm

cytosol

cytoskeleton

plasma membrane

 
243581_at -0.298 2.492 -2.231 4.116e-02 0.533 -3.876 LOC646470 similar to proteaseome (prosome, macropain) 28 subunit, 3 1   AW117229 1q23.3 Hs.659284      
236613_at -0.328 4.330 -2.231 4.117e-02 0.533 -3.876 RBM25 RNA binding motif protein 25 14 72594973 BE466195 14q24.3 Hs.531106 13

nucleotide binding

nuclear mRNA splicing, via spliceosome

nucleic acid binding

mRNA binding

cellular_component

nucleus

cytoplasm

nuclear speck

 
212576_at 0.229 6.907 2.231 4.118e-02 0.533 -3.876 MGRN1 mahogunin, ring finger 1 16 4614826 AB011116 16p13.3 Hs.526494 10

protein binding

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

Ubiquitin mediated proteolysis

1561504_s_at -1.777 7.634 -2.230 4.120e-02 0.533 -3.876 MYLK4 myosin light chain kinase family, member 4 6 -2608861 AK096893 6p25.2 Hs.127830 4

nucleotide binding

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

transferase activity

 
223021_x_at -0.407 7.356 -2.230 4.121e-02 0.533 -3.877 VTA1 Vps20-associated 1 homolog (S. cerevisiae) 6 142510102 BF241590 6q24.1 Hs.431367 12

cytoplasm

endosome

protein transport

membrane

Endocytosis

202067_s_at -0.193 4.818 -2.230 4.122e-02 0.533 -3.877 LDLR low density lipoprotein receptor 19 11061056 AI861942 19p13.3 Hs.213289 Hs.713967 374

transmembrane receptor activity

low-density lipoprotein receptor activity

calcium ion binding

endosome

plasma membrane

plasma membrane

integral to plasma membrane

coated pit

protein amino acid O-linked glycosylation

lipid metabolic process

lipid transport

endocytosis

steroid metabolic process

cholesterol metabolic process

endosome membrane

very-low-density lipoprotein receptor activity

intestinal cholesterol absorption

clathrin-coated endocytic vesicle membrane

low-density lipoprotein particle

low-density lipoprotein particle clearance

lipoprotein catabolic process

cholesterol homeostasis

interspecies interaction between organisms

Endocytosis

223247_at -0.210 6.851 -2.230 4.123e-02 0.533 -3.877 MED10 mediator complex subunit 10 5 -6425038 BC003353 5p15.31 Hs.13885 12

nucleus

regulation of transcription from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

regulation of transcription

 
222234_s_at 0.383 5.614 2.229 4.126e-02 0.533 -3.878 DBNDD1 dysbindin (dystrobrevin binding protein 1) domain containing 1 16 -88598779, -88598779 AK022644 16q24.3 Hs.301394 5

protein binding

cytoplasm

 
238012_at 0.315 5.615 2.229 4.126e-02 0.533 -3.878 DPP7 dipeptidyl-peptidase 7 9 -139124812 AI620209 9q34.3 Hs.37916 15

aminopeptidase activity

protein binding

lysosome

proteolysis

peptidase activity

serine-type peptidase activity

cytoplasmic vesicle

 
1554474_a_at -0.243 2.820 -2.229 4.129e-02 0.533 -3.878 MOXD1 monooxygenase, DBH-like 1 6 -132658886 BC018756 6q23.1-q23.3 Hs.6909 4

monooxygenase activity

dopamine beta-monooxygenase activity

copper ion binding

endoplasmic reticulum

histidine catabolic process

catecholamine metabolic process

cellular process

membrane

integral to membrane

metal ion binding

oxidation reduction

 
226225_at 0.605 6.595 2.229 4.129e-02 0.533 -3.878 MCC mutated in colorectal cancers 5 -112385694, -112385694 BE967311 5q21 Hs.593171 18

receptor activity

protein binding

signal transduction

 
205402_x_at -0.211 4.382 -2.229 4.129e-02 0.533 -3.878 PRSS2 protease, serine, 2 (trypsin 2) 7 142178777 NM_002770 7q34 Hs.622865 39

serine-type endopeptidase activity

calcium ion binding

protein binding

extracellular region

extracellular space

proteolysis

digestion

peptidase activity

positive regulation of cell growth

collagen catabolic process

collagen catabolic process

extracellular matrix

positive regulation of cell adhesion

Neuroactive ligand-receptor interaction

225800_at 0.207 4.326 2.229 4.130e-02 0.533 -3.879 JAZF1 JAZF zinc finger 1 7 -27836717 AI990891 7p15.2-p15.1 Hs.368944 39

negative regulation of transcription from RNA polymerase II promoter

nucleic acid binding

transcription corepressor activity

intracellular

nucleus

zinc ion binding

transcriptional repressor complex

regulation of transcription

metal ion binding

 
200927_s_at -0.403 7.252 -2.229 4.132e-02 0.533 -3.879 RAB14 RAB14, member RAS oncogene family 9 -122980236 AA919115 9q32-q34.11 Hs.371563 Hs.713585 19

nucleotide binding

GTPase activity

protein binding

GTP binding

intracellular

membrane fraction

lysosome

early endosome

late endosome

rough endoplasmic reticulum

Golgi stack

cytosol

plasma membrane

Golgi to endosome transport

small GTPase mediated signal transduction

neurotransmitter secretion

protein transport

vesicle-mediated transport

trans-Golgi network transport vesicle

nuclear envelope-endoplasmic reticulum network

intracellular transport

perinuclear region of cytoplasm

 
219670_at 0.424 5.782 2.229 4.132e-02 0.533 -3.879 BEND5 BEN domain containing 5 1 -48966126 NM_024603 1p33 Hs.475348 5

Golgi apparatus

 
219452_at 0.184 4.806 2.229 4.133e-02 0.533 -3.879 DPEP2 dipeptidase 2 16 -66578795 NM_022355 16q22.1 Hs.372633 7

proteolysis

peptidase activity

metalloexopeptidase activity

dipeptidyl-peptidase activity

zinc ion binding

membrane

dipeptidase activity

anchored to membrane

metal ion binding

 
212972_x_at -0.222 6.097 -2.229 4.133e-02 0.533 -3.879 APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 4 -40506801 AL080130 4p14-p13 Hs.479602 12

beta-amyloid binding

nucleus

cell cycle arrest

intracellular signaling cascade

transcription factor binding

membrane

lamellipodium

negative regulation of cell growth

growth cone

synapse

regulation of transcription

negative regulation of S phase of mitotic cell cycle

 
219126_at -0.388 7.551 -2.228 4.136e-02 0.533 -3.880 PHF10 PHD finger protein 10 6 -169845925 NM_018288 6q27 Hs.435933 14

protein binding

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
240161_s_at -0.275 3.157 -2.228 4.137e-02 0.533 -3.880 CDC20B cell division cycle 20 homolog B (S. cerevisiae) 5 -54444579 AI470220 5q11.2 Hs.669184 3    
207812_s_at -0.312 7.617 -2.228 4.139e-02 0.533 -3.880 GORASP2 golgi reassembly stacking protein 2, 55kDa 2 171493956 NM_015530 2q31.1-q31.2 Hs.431317 16

protein binding

Golgi apparatus

Golgi medial cisterna

Golgi organization

membrane

 
233006_at 0.265 5.536 2.228 4.139e-02 0.533 -3.880 SEPT4 septin 4 17 -53952614, -53952614 AU147957 17q22-q23 Hs.287518 29

nucleotide binding

cytokinesis

GTPase activity

structural molecule activity

protein binding

GTP binding

nucleus

cytoplasm

cell cycle

 
220610_s_at -0.345 6.899 -2.228 4.141e-02 0.533 -3.881 LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 3 -37069120 NM_006309 3p22.2 Hs.719246 7

protein binding

cellular_component

biological_process

Wnt receptor signaling pathway

LRR domain binding

 
203510_at -0.504 7.360 -2.228 4.141e-02 0.533 -3.881 MET met proto-oncogene (hepatocyte growth factor receptor) 7 116099694 BG170541 7q31 Hs.132966 256

nucleotide binding

activation of MAPK activity

neuron migration

receptor activity

hepatocyte growth factor receptor activity

protein binding

ATP binding

membrane fraction

integral to plasma membrane

cell surface receptor linked signal transduction

multicellular organismal development

brain development

muscle organ development

lactation

basal plasma membrane

membrane

transferase activity

flagellum

sperm motility

adult behavior

protein amino acid autophosphorylation

hepatocyte growth factor receptor signaling pathway

myoblast proliferation

Cytokine-cytokine receptor interaction

Endocytosis

Axon guidance

Focal adhesion

Adherens junction

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Melanoma

209698_at 0.251 6.656 2.227 4.143e-02 0.533 -3.881 CCHCR1 coiled-coil alpha-helical rod protein 1 6 -31218194, -31218194, -2561482, -2561482, -2359996, -2359996 AF216493 6p21.3 Hs.485075 23

protein binding

nucleus

cytoplasm

protein export from nucleus

multicellular organismal development

cell differentiation

 
203846_at -0.305 7.396 -2.227 4.144e-02 0.533 -3.881 TRIM32 tripartite motif-containing 32 9 118489401 BC003154 9q33.1 Hs.591910 18

transcription coactivator activity

intracellular

nucleus

cytoplasm

zinc ion binding

ligase activity

modification-dependent protein catabolic process

protein ubiquitination during ubiquitin-dependent protein catabolic process

ubiquitin binding

protein self-association

fat cell differentiation

metal ion binding

Ubiquitin mediated proteolysis

229517_at 0.300 5.782 2.227 4.146e-02 0.533 -3.882 PTPDC1 protein tyrosine phosphatase domain containing 1 9 95832896, 95886566 BE046919 9q22.32 Hs.437943 2

protein tyrosine phosphatase activity

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

 
221768_at 0.276 7.636 2.227 4.149e-02 0.533 -3.882 SFPQ splicing factor proline/glutamine-rich (polypyrimidine tract binding protein associated) 1 -35421789 AV705803 1p34.3 Hs.355934 47

nucleotide binding

DNA binding

RNA binding

protein binding

nucleus

DNA repair

DNA recombination

mRNA processing

response to DNA damage stimulus

RNA splicing

nuclear matrix

regulation of transcription

 
232298_at -0.610 7.873 -2.226 4.150e-02 0.533 -3.883 hCG_1806964 hypothetical LOC401093 3 -153463102 AK026494 3q25.1 Hs.201858 Hs.558914 Hs.719379 3    
208036_at 0.261 4.091 2.226 4.154e-02 0.534 -3.883 OPN1SW opsin 1 (cone pigments), short-wave-sensitive 7 -128199778 NM_001708 7q32.1 Hs.656404 14

photoreceptor outer segment

G-protein coupled receptor activity

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

visual perception

phototransduction

photoreceptor activity

membrane

protein-chromophore linkage

response to stimulus

 
227320_at 0.311 6.014 2.226 4.155e-02 0.534 -3.884 FAM101A family with sequence similarity 101, member A 12 123339662 AW264333 12q24.31 Hs.432901 3    
206398_s_at 0.220 4.807 2.226 4.157e-02 0.534 -3.884 CD19 CD19 molecule 16 28850760 NM_001770 16p11.2 Hs.652262 49

receptor signaling protein activity

protein binding

plasma membrane

integral to plasma membrane

cellular defense response

cell surface receptor linked signal transduction

external side of plasma membrane

B cell receptor signaling pathway

Hematopoietic cell lineage

B cell receptor signaling pathway

Primary immunodeficiency

203710_at 0.494 4.914 2.225 4.159e-02 0.534 -3.885 ITPR1 inositol 1,4,5-triphosphate receptor, type 1 3 4510033 NM_002222 3p26-p25 Hs.567295 Hs.715765 87

response to hypoxia

ion channel activity

inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity

calcium channel activity

calcium channel activity

calcium ion binding

protein binding

endoplasmic reticulum

ion transport

calcium ion transport

signal transduction

cell death

calcium ion transmembrane transporter activity

membrane

integral to membrane

platelet dense granule membrane

platelet dense tubular network membrane

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Gap junction

Long-term potentiation

Long-term depression

GnRH signaling pathway

Alzheimer's disease

Huntington's disease

228075_x_at 0.251 6.925 2.225 4.161e-02 0.534 -3.885 TFB1M transcription factor B1, mitochondrial 6 -155620481 AI341648 6q25.1-q25.3 Hs.279908 15

rRNA modification

rRNA (adenine-N6,N6-)-dimethyltransferase activity

DNA binding

mitochondrion

methyltransferase activity

rRNA methyltransferase activity

transferase activity

mitochondrial nucleoid

regulation of transcription

 
222269_at 0.386 4.901 2.225 4.165e-02 0.534 -3.886 APOOL apolipoprotein O-like X 84145560 W87634 Xq21.1 Hs.512181 Hs.706885 7

extracellular region

mitochondrion

mitochondrial inner membrane

 
221280_s_at -0.304 5.421 -2.225 4.165e-02 0.534 -3.886 PARD3 par-3 partitioning defective 3 homolog (C. elegans) 10 -34440102 NM_019619 10p11.21 Hs.131489 40

protein binding

cytoplasm

plasma membrane

tight junction

tight junction

cell cortex

protein complex assembly

cell cycle

establishment or maintenance of cell polarity

activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway

axonogenesis

asymmetric cell division

cell junction

Chemokine signaling pathway

Neuroactive ligand-receptor interaction

Endocytosis

Adherens junction

Tight junction

211676_s_at -0.657 6.362 -2.225 4.166e-02 0.534 -3.886 IFNGR1 interferon gamma receptor 1 6 -137560313 AF056979 6q23.3 Hs.520414 104

receptor activity

interferon-gamma receptor activity

integral to plasma membrane

signal transduction

response to virus

membrane

cytokine binding

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

223002_s_at -0.189 6.117 -2.224 4.167e-02 0.534 -3.886 XRN2 5'-3' exoribonuclease 2 20 21231941 AL136841 20p11.2-p11.1 Hs.255932 18

DNA catabolic process, exonucleolytic

nucleic acid binding

5'-3' exoribonuclease activity

protein binding

intracellular

nucleus

nucleolus

transcription termination

mRNA processing

RNA catabolic process

spermatogenesis

zinc ion binding

cell growth

hydrolase activity

regulation of transcription

metal ion binding

RNA degradation

232407_at -0.172 5.600 -2.224 4.169e-02 0.534 -3.887 MUC17 mucin 17, cell surface associated 7 100450083 AK026404 7q22.1 Hs.271819 9

extracellular region

plasma membrane

biological_process

integral to membrane

extracellular matrix constituent, lubricant activity

 
211081_s_at -0.289 3.392 -2.223 4.175e-02 0.534 -3.888 MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 14 -49954992 Z25426 14q11.2-q21 Hs.130491 14

nucleotide binding

protein serine/threonine kinase activity

small GTPase regulator activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

response to stress

protein kinase cascade

activation of JUN kinase activity

transferase activity

 
1554026_a_at 0.210 4.354 2.223 4.177e-02 0.534 -3.888 MYO10 myosin X 5 -16715015 BC041694 5p15.1-p14.3 Hs.481720 19

nucleotide binding

motor activity

actin binding

ATP binding

cytoskeleton

signal transduction

myosin complex

Fc gamma R-mediated phagocytosis

225915_at -0.664 5.996 -2.223 4.179e-02 0.534 -3.889 CAB39L calcium binding protein 39-like 13 -48780786, -48780786 AL138875 13q14.2 Hs.87159 9

protein binding

mTOR signaling pathway

230030_at -1.119 4.863 -2.223 4.180e-02 0.534 -3.889 HS6ST2 heparan sulfate 6-O-sulfotransferase 2 X -131587718 AI767756 Xq26.2 Hs.385956 7

sulfotransferase activity

membrane

integral to membrane

transferase activity

Heparan sulfate biosynthesis

200739_s_at -0.176 7.331 -2.222 4.183e-02 0.534 -3.890 SUMO3 SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae) 21 -45049959 BG338532 21q22.3 Hs.474005 40

kinetochore

protein binding

cytoplasm

protein sumoylation

modification-dependent protein catabolic process

 
212779_at -0.718 9.309 -2.222 4.184e-02 0.534 -3.890 KIAA1109 KIAA1109 4 123311207 AB029032 4q27 Hs.408142 12

membrane

integral to membrane

 
240106_at -0.247 6.007 -2.222 4.185e-02 0.534 -3.890 GNPTAB N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits 12 -100663407 AI633523 12q23.2 Hs.46850 16

UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity

calcium ion binding

nucleus

Golgi apparatus

transcription factor binding

membrane

integral to membrane

transferase activity

cell differentiation

Lysosome

1559566_at -0.278 3.537 -2.222 4.185e-02 0.534 -3.890 FBXO42 F-box protein 42 1 -16449145 AL833207 1p36.23-p36.11 Hs.522384 7

modification-dependent protein catabolic process

 
229001_at -0.513 6.812 -2.222 4.188e-02 0.534 -3.890 PPP1R3E protein phosphatase 1, regulatory (inhibitor) subunit 3E 14 -22834952 BE259127 14q11.2 Hs.601513 Hs.672733 3

carbohydrate metabolic process

glycogen metabolic process

 
217976_s_at -0.297 7.682 -2.222 4.188e-02 0.534 -3.890 DYNC1LI1 dynein, cytoplasmic 1, light intermediate chain 1 3 -32542470 NM_016141 3p22.3 Hs.529495 11

nucleotide binding

motor activity

ATP binding

microtubule

dynein complex

 
202605_at 0.283 6.700 2.222 4.188e-02 0.534 -3.890 GUSB glucuronidase, beta 7 -65063107 NM_000181 7q21.11 Hs.255230 45

beta-glucuronidase activity

lysosome

carbohydrate metabolic process

glycosaminoglycan catabolic process

metabolic process

cation binding

Pentose and glucuronate interconversions

Starch and sucrose metabolism

Glycosaminoglycan degradation

Porphyrin and chlorophyll metabolism

Drug metabolism - other enzymes

Metabolic pathways

Lysosome

1561451_a_at 0.229 3.793 2.222 4.188e-02 0.534 -3.891 ADAM29 ADAM metallopeptidase domain 29 4 176076083 BC034301 4q34 Hs.126838 5

metalloendopeptidase activity

integral to plasma membrane

proteolysis

spermatogenesis

zinc ion binding

membrane

 
222989_s_at -0.296 7.341 -2.222 4.189e-02 0.534 -3.891 UBQLN1 ubiquilin 1 9 -85464697 NM_013438 9q21.2-q21.3 9q22 Hs.9589 46

nucleus

cytoplasm

cytosol

kinase binding

protein complex

perinuclear region of cytoplasm

 
215014_at 0.433 2.701 2.221 4.190e-02 0.534 -3.891 KCND3 potassium voltage-gated channel, Shal-related subfamily, member 3 1 -112119976 AL512727 1p13.3 Hs.666367 23

voltage-gated ion channel activity

voltage-gated potassium channel activity

A-type (transient outward) potassium channel activity

protein binding

ion transport

potassium ion transport

voltage-gated potassium channel complex

zinc ion binding

potassium ion binding

sarcolemma

neuron projection

cell soma

metal ion binding

 
201071_x_at -0.230 9.823 -2.221 4.191e-02 0.534 -3.891 SF3B1 splicing factor 3b, subunit 1, 155kDa 2 -197991765, -197964942 NM_012433 2q33.1 Hs.632554 34

nuclear mRNA splicing, via spliceosome

nuclear mRNA splicing, via spliceosome

protein binding

nucleus

spliceosomal complex

RNA splicing

nuclear speck

RNA splicing factor activity, transesterification mechanism

 
213331_s_at 0.276 5.645 2.221 4.191e-02 0.534 -3.891 NEK1 NIMA (never in mitosis gene a)-related kinase 1 4 -170551003 AV700007 4q33 Hs.481181 11

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

cell cycle

mitosis

transferase activity

cell division

 
213599_at -0.496 6.367 -2.221 4.194e-02 0.534 -3.892 OIP5 Opa interacting protein 5 15 -39388757 BE045993 15q15.1 Hs.661645 6

chromosome, centromeric region

chromatin

protein binding

cellular_component

nucleus

cell cycle

mitosis

cell communication

chromocenter

Cajal body

cell division

 
221527_s_at -0.435 7.473 -2.220 4.199e-02 0.534 -3.893 PARD3 par-3 partitioning defective 3 homolog (C. elegans) 10 -34440102 AF196185 10p11.21 Hs.131489 40

protein binding

cytoplasm

plasma membrane

tight junction

tight junction

cell cortex

protein complex assembly

cell cycle

establishment or maintenance of cell polarity

activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway

axonogenesis

asymmetric cell division

cell junction

Chemokine signaling pathway

Neuroactive ligand-receptor interaction

Endocytosis

Adherens junction

Tight junction

215472_at 0.255 4.130 2.220 4.201e-02 0.534 -3.893 PACRG PARK2 co-regulated 6 163068153, 163068991 AI017119 6q26 Hs.25791 20    
235121_at 0.315 4.590 2.220 4.201e-02 0.534 -3.893 ZNF542 zinc finger protein 542 19 61571279, 61571476 BE966943 19q13.43 Hs.467326 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
232067_at 0.273 3.182 2.220 4.203e-02 0.534 -3.893 C6orf168 chromosome 6 open reading frame 168 6 -99827513 BC004869 6q16.2 Hs.573245 5

mitochondrial outer membrane

protein targeting to mitochondrion

 
203582_s_at -0.246 7.410 -2.220 4.204e-02 0.534 -3.894 RAB4A RAB4A, member RAS oncogene family 1 227473501 NM_004578 1q42-q43 Hs.296169 43

nucleotide binding

GTPase activity

GTP binding

cytoplasm

small GTPase mediated signal transduction

protein transport

membrane

Endocytosis

201455_s_at -0.340 8.739 -2.220 4.206e-02 0.534 -3.894 NPEPPS aminopeptidase puromycin sensitive 17 42963442 AJ132583 17q21 Hs.443837 14

aminopeptidase activity

protein binding

nucleus

cytoplasm

cytosol

proteolysis

peptidase activity

metallopeptidase activity

zinc ion binding

metal ion binding

 
211865_s_at -0.246 4.398 -2.219 4.206e-02 0.534 -3.894 FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 19 3457294, 3473953 AB013463 19p13.3 Hs.413133 35

protein binding

nucleus

nucleoplasm

anaphase-promoting complex

cytoplasm

cytosol

ubiquitin-dependent protein catabolic process

cell cycle

mitosis

enzyme activator activity

cell division

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

1556204_a_at 0.339 4.241 2.219 4.208e-02 0.534 -3.895 ZNF814 zinc finger protein 814 19 -63072558 AK096401 19q13.43 Hs.634143 Hs.669024 Hs.719319 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
232355_at -0.209 2.713 -2.219 4.209e-02 0.534 -3.895 SNORD114-3 small nucleolar RNA, C/D box 114-3 14 100489438 AU146318 14q32 Hs.613596 2    
217608_at -0.365 5.091 -2.219 4.210e-02 0.534 -3.895 SFRS12IP1 SFRS12-interacting protein 1 5 -64049733 AW408767 5q12.3 Hs.69504 3

nucleic acid binding

mRNA processing

zinc ion binding

RNA splicing

metal ion binding

 
206376_at 0.161 2.644 2.219 4.210e-02 0.534 -3.895 SLC6A15 solute carrier family 6 (neutral amino acid transporter), member 15 12 -83798761, -83777399 NM_018057 12q21.3 Hs.44424 10

neurotransmitter:sodium symporter activity

integral to plasma membrane

neurotransmitter transport

symporter activity

membrane

 
226484_at -0.253 8.379 -2.219 4.211e-02 0.534 -3.895 ZBTB47 zinc finger and BTB domain containing 47 3 42675877 AA532640 3p22.1 Hs.409561 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
1553750_a_at -0.223 2.716 -2.219 4.211e-02 0.534 -3.895 FAM76B family with sequence similarity 76, member B 11 -95141753 NM_144664 11q21 Hs.288304 11    
222407_s_at -0.403 10.913 -2.219 4.212e-02 0.534 -3.895 ZFP106 zinc finger protein 106 homolog (mouse) 15 -40492312 AI493587 15q15.1 Hs.511143 9

opioid peptide activity

intracellular

membrane fraction

nucleus

nucleolus

cytosol

zinc ion binding

insulin receptor signaling pathway

SH3 domain binding

metal ion binding

 
210720_s_at 0.275 7.677 2.219 4.212e-02 0.534 -3.895 NECAB3 N-terminal EF-hand calcium binding protein 3 20 -31708553 AB039947 20q11.22 Hs.516986 11

Golgi cis cisterna

Golgi cis cisterna

calcium ion binding

protein binding

protein binding

protein binding

nucleus

cytoplasm

cytoplasm

endoplasmic reticulum membrane

endoplasmic reticulum membrane

Golgi apparatus

protein secretion

oxidoreductase activity

antibiotic biosynthetic process

protein metabolic process

protein metabolic process

regulation of amyloid precursor protein biosynthetic process

 
1562988_at -0.181 3.259 -2.218 4.215e-02 0.534 -3.896 ZNF397OS zinc finger protein 397 opposite strand 18 -31086816 AF373035 18q12.2 Hs.464896 3

transcription factor activity

intracellular

nucleus

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
241392_at 0.237 4.611 2.218 4.221e-02 0.534 -3.897 TMEM39A transmembrane protein 39A 3 -120632390 BE551352 3q13.33 Hs.656003 3

membrane

integral to membrane

 
207509_s_at 0.210 3.543 2.217 4.223e-02 0.534 -3.898 LAIR2 leukocyte-associated immunoglobulin-like receptor 2 19 59705824 NM_002288 19q13.4 Hs.43803 9

receptor activity

extracellular region

 
205386_s_at 0.172 2.109 2.217 4.227e-02 0.534 -3.898 MDM2 Mdm2 p53 binding protein homolog (mouse) 12 67488237, 67489063 NM_002392 12q14.3-q15 Hs.484551 555

negative regulation of transcription from RNA polymerase II promoter

negative regulation of transcription from RNA polymerase II promoter

p53 binding

ubiquitin-protein ligase activity

intracellular

insoluble fraction

nucleus

nucleoplasm

nucleoplasm

nucleolus

cytoplasm

cytosol

protein complex assembly

zinc ion binding

positive regulation of cell proliferation

ligase activity

basal transcription repressor activity

basal transcription repressor activity

enzyme binding

modification-dependent protein catabolic process

positive regulation of proteasomal ubiquitin-dependent protein catabolic process

regulation of protein catabolic process

protein ubiquitination during ubiquitin-dependent protein catabolic process

identical protein binding

interspecies interaction between organisms

metal ion binding

Cell cycle

p53 signaling pathway

Ubiquitin mediated proteolysis

Endocytosis

Pathways in cancer

Glioma

Prostate cancer

Melanoma

Bladder cancer

Chronic myeloid leukemia

218967_s_at 0.495 6.965 2.217 4.227e-02 0.534 -3.898 PTER phosphotriesterase related 10 16518972 NM_030664 10p12 Hs.444321 Hs.716660 6

zinc ion binding

catabolic process

hydrolase activity, acting on ester bonds

metal ion binding

 
222338_x_at 0.196 6.879 2.217 4.228e-02 0.535 -3.899 LOC646808 similar to L antigen family, member 3 9   AI375965 9p21.1        
225639_at 0.561 6.745 2.217 4.229e-02 0.535 -3.899 SKAP2 src kinase associated phosphoprotein 2 7 -26673212 N21390 7p21-p15 Hs.200770 Hs.644804 19

SH3/SH2 adaptor activity

cytoplasm

plasma membrane

protein complex assembly

signal transduction

negative regulation of cell proliferation

B cell activation

 
202046_s_at 0.158 2.928 2.216 4.231e-02 0.535 -3.899 GRLF1 glucocorticoid receptor DNA binding factor 1 19 52113772 NM_004491 19q13.3 Hs.509447 26

DNA binding

transcription corepressor activity

GTPase activator activity

intracellular

nucleus

cytoplasm

signal transduction

negative regulation of transcription

Focal adhesion

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

215505_s_at -0.440 5.422 -2.216 4.232e-02 0.535 -3.899 STRN3 striatin, calmodulin binding protein 3 14 -30432755 AF243424 14q13-q21 Hs.21016 Hs.401843 13

calmodulin binding

membrane fraction

nucleus

cytoplasm

cytosol

cell cycle

membrane

 
218387_s_at 0.261 6.166 2.216 4.236e-02 0.535 -3.900 PGLS 6-phosphogluconolactonase 19 17483431 NM_012088 19p13.2 Hs.466165 5

carbohydrate metabolic process

pentose-phosphate shunt

hydrolase activity

6-phosphogluconolactonase activity

Pentose phosphate pathway

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of plant hormones

Metabolic pathways

201917_s_at 0.309 9.167 2.215 4.245e-02 0.536 -3.902 SLC25A36 solute carrier family 25, member 36 3 142143351 AI694452 3q23 Hs.144130 7

transporter activity

binding

mitochondrion

mitochondrial inner membrane

transport

membrane

integral to membrane

response to estradiol stimulus

 
223411_at 0.205 8.047 2.215 4.246e-02 0.536 -3.902 MIF4GD MIF4G domain containing 17 -70773905 AF225422 17q25.1 Hs.325631 5

protein binding

nucleus

cytoplasm

regulation of translation

RNA metabolic process

 
216979_at -2.421 5.170 -2.214 4.247e-02 0.536 -3.902 NR4A3 nuclear receptor subfamily 4, group A, member 3 9 101623957, 101623957, 101628829 X89894 9q22 Hs.279522 24

mesoderm formation

transcription factor activity

steroid hormone receptor activity

thyroid hormone receptor activity

binding

nucleus

regulation of transcription, DNA-dependent

biological_process

zinc ion binding

transcription activator activity

adult behavior

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

semicircular canal morphogenesis

neuromuscular process controlling balance

vestibular reflex

 
206342_x_at -0.303 6.047 -2.214 4.247e-02 0.536 -3.903 IDS iduronate 2-sulfatase X -148376566, -148368202 NM_006123 Xq28 Hs.460960 73

iduronate-2-sulfatase activity

calcium ion binding

lysosome

metabolic process

hydrolase activity

glycosaminoglycan metabolic process

Glycosaminoglycan degradation

Metabolic pathways

Lysosome

203267_s_at -0.217 6.407 -2.214 4.248e-02 0.536 -3.903 DRG2 developmentally regulated GTP binding protein 2 17 17932007 BF223206 17p11.2 Hs.78582 12

nucleotide binding

GTP binding

intracellular

cytoplasm

signal transduction

 
205020_s_at 0.285 5.164 2.214 4.249e-02 0.536 -3.903 ARL4A ADP-ribosylation factor-like 4A 7 12693005, 12693485 NM_005738 7p21-p15.3 Hs.245540 8

nucleotide binding

GTPase activity

protein binding

GTP binding

intracellular

nucleus

nucleolus

small GTPase mediated signal transduction

 
1553893_at 0.235 5.005 2.214 4.253e-02 0.536 -3.904 CCDC105 coiled-coil domain containing 105 19 14982538 NM_173482 19p13.12 Hs.375985 2    
210716_s_at -0.462 7.410 -2.214 4.253e-02 0.536 -3.904 CLIP1 CAP-GLY domain containing linker protein 1 12 -121321933 M97501 12q24.3 Hs.524809 37

kinetochore

nucleic acid binding

protein binding

cytoplasm

endosome

microtubule

intermediate filament

mitosis

microtubule binding

zinc ion binding

protein homodimerization activity

metal ion binding

 
220646_s_at 0.411 3.337 2.213 4.257e-02 0.536 -3.905 KLRF1 killer cell lectin-like receptor subfamily F, member 1 12 9871343 NM_016523 12p13.2-p12.3 Hs.183125 6

binding

sugar binding

integral to plasma membrane

cell surface receptor linked signal transduction

membrane

MHC class I receptor activity

 
215680_at 0.208 4.756 2.213 4.257e-02 0.536 -3.905 KIAA1654 KIAA1654 protein 22   AB051441   Hs.658191 1    
239742_at 0.571 5.071 2.213 4.258e-02 0.536 -3.905 TULP4 tubby like protein 4 6 158653679 H15278 6q25-q26 Hs.486993 7

transcription factor activity

protein binding

cellular_component

cytoplasm

regulation of transcription, DNA-dependent

intracellular signaling cascade

response to nutrient

modification-dependent protein catabolic process

 
214953_s_at 0.329 6.705 2.213 4.259e-02 0.536 -3.905 APP amyloid beta (A4) precursor protein 21 -26174732 X06989 21q21.2 21q21.3 Hs.434980 835

serine-type endopeptidase inhibitor activity

serine-type endopeptidase inhibitor activity

iron ion binding

copper ion binding

extracellular region

extracellular region

cytoplasm

Golgi apparatus

plasma membrane

integral to plasma membrane

coated pit

cellular copper ion homeostasis

endocytosis

cell adhesion

Notch signaling pathway

heparin binding

cell death

zinc ion binding

cell surface

peptidase inhibitor activity

platelet alpha granule lumen

acetylcholine receptor binding

identical protein binding

metal ion binding

neuromuscular process

neuron apoptosis

Alzheimer's disease

231056_at 0.221 5.900 2.213 4.263e-02 0.537 -3.906 LOC339352 similar to Putative ATP-binding domain-containing protein 3-like protein 19   AI479923 19q13.41        
209443_at 0.894 7.072 2.212 4.268e-02 0.537 -3.907 SERPINA5 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5 14 94117483 J02639 14q32.1 Hs.159628 62

protease binding

serine-type endopeptidase inhibitor activity

protein binding

extracellular region

extracellular region

spermatogenesis

fusion of sperm to egg plasma membrane

heparin binding

membrane

peptidase inhibitor activity

acrosin binding

protein complex

negative regulation of proteolysis

Complement and coagulation cascades

203430_at 0.225 10.424 2.211 4.275e-02 0.537 -3.908 HEBP2 heme binding protein 2 6 138767028 NM_014320 6q24 Hs.486589 8

cytoplasm

 
214145_s_at -0.352 7.427 -2.211 4.275e-02 0.537 -3.908 SPTB spectrin, beta, erythrocytic 14 -64302901, -64282753 BG223341 14q23-q24.2 Hs.417303 62

structural constituent of cytoskeleton

protein binding

cytoplasm

cell cortex

spectrin

spectrin-associated cytoskeleton

actin cytoskeleton

intrinsic to internal side of plasma membrane

protein complex

actin filament binding

actin filament capping

 
209061_at -0.362 7.687 -2.211 4.275e-02 0.537 -3.908 NCOA3 nuclear receptor coactivator 3 20 45564063 AI761748 20q12 Hs.592142 140

transcription coactivator activity

histone acetyltransferase activity

signal transducer activity

nucleus

cytoplasm

signal transduction

acyltransferase activity

transferase activity

androgen receptor signaling pathway

transcription regulator activity

positive regulation of transcription, DNA-dependent

thyroid hormone receptor binding

protein N-terminus binding

androgen receptor binding

 
202745_at -0.207 7.270 -2.211 4.277e-02 0.537 -3.909 USP8 ubiquitin specific peptidase 8 15 48503870 NM_005154 15q21.2 Hs.644563 25

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

protein binding

ubiquitin-dependent protein catabolic process

peptidase activity

cell proliferation

SH3 domain binding

Endocytosis

204980_at 0.307 6.636 2.211 4.279e-02 0.537 -3.909 CLOCK clock homolog (mouse) 4 -55993416 NM_004898 4q12 Hs.436975 72

transcription factor activity

histone acetyltransferase activity

signal transducer activity

protein binding

nucleus

transcription factor complex

nucleolus

cytoplasm

signal transduction

circadian rhythm

acyltransferase activity

photoperiodism

transferase activity

positive regulation of transcription from RNA polymerase II promoter

Circadian rhythm - mammal

1561961_at -0.190 3.118 -2.210 4.280e-02 0.537 -3.909 DKFZp686A1627 PHD finger protein 2 pseudogene-like 13 -18518292 AL832753 13q11 Hs.614937      
219574_at 0.220 3.461 2.210 4.282e-02 0.537 -3.910 MARCH1 membrane-associated ring finger (C3HC4) 1 4 -164668498 NM_017923 4q32.2-q32.3 Hs.608487 Hs.696248 5

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

cytoplasmic vesicle

metal ion binding

 
225347_at -0.208 6.601 -2.210 4.282e-02 0.537 -3.910 ARL8A ADP-ribosylation factor-like 8A 1 -200368599 AL520984 1q32.1 Hs.497399 Hs.604697 7

nucleotide binding

GTPase activity

GTP binding

intracellular

cytoplasm

lysosomal membrane

endosome

chromosome segregation

small GTPase mediated signal transduction

membrane

midbody

late endosome membrane

alpha-tubulin binding

beta-tubulin binding

spindle midzone

 
227450_at 0.265 3.794 2.210 4.286e-02 0.537 -3.910 ERP27 endoplasmic reticulum protein 27 12 -14958243 AI051248 12p12.3 Hs.162143 6

endoplasmic reticulum

endoplasmic reticulum lumen

 
224514_x_at 0.278 5.304 2.210 4.287e-02 0.537 -3.910 IL17RC interleukin 17 receptor C 3 9933763 BC006411 3p25.3 3p25.3-p24.1 Hs.129959 14

receptor activity

plasma membrane

integral to membrane

 
202776_at -0.267 7.875 -2.209 4.288e-02 0.537 -3.911 DNTTIP2 deoxynucleotidyltransferase, terminal, interacting protein 2 1 -94107923 NM_014597 1p22.1 Hs.85769 10

nucleus

regulation of transcription

 
1552491_at 0.465 9.274 2.209 4.288e-02 0.537 -3.911 IDI2 isopentenyl-diphosphate delta isomerase 2 10 -1054846 NM_033261 10p15.3 Hs.591325 Hs.9270 6

magnesium ion binding

isopentenyl-diphosphate delta-isomerase activity

peroxisome

cytosol

cholesterol biosynthetic process

isoprenoid biosynthetic process

carotenoid biosynthetic process

hydrolase activity

isomerase activity

Terpenoid backbone biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

213748_at 0.221 5.183 2.209 4.290e-02 0.537 -3.911 TRIM66 tripartite motif-containing 66 11 -8590161 AW271713 11p15.4 Hs.130836 4

protein binding

intracellular

nucleus

zinc ion binding

chromocenter

transcription repressor activity

protein homodimerization activity

negative regulation of transcription, DNA-dependent

metal ion binding

 
238600_at -0.159 4.314 -2.209 4.292e-02 0.537 -3.912 JAKMIP1 janus kinase and microtubule interacting protein 1 4 -6106382, -6078826 AW157571 4p16.1 Hs.479066 10

peripheral to membrane of membrane fraction

RNA binding

cytoplasm

cytoskeleton

microtubule

protein transport

membrane

ribonucleoprotein complex

GABA receptor binding

 
226660_at -0.345 8.434 -2.209 4.296e-02 0.537 -3.912 RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 17 55325224 AI142096 17q23.1 Hs.463642 123

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

cytosol

protein amino acid phosphorylation

signal transduction

transferase activity

synaptosome

cell junction

synapse

ErbB signaling pathway

mTOR signaling pathway

TGF-beta signaling pathway

Fc gamma R-mediated phagocytosis

Insulin signaling pathway

Acute myeloid leukemia

206265_s_at 0.195 3.154 2.208 4.297e-02 0.537 -3.912 GPLD1 glycosylphosphatidylinositol specific phospholipase D1 6 -24581304, -24536383 NM_001503 6p22.3-p22.2 Hs.533291 26

glycosylphosphatidylinositol phospholipase D activity

extracellular region

hydrolase activity

Glycosylphosphatidylinositol(GPI)-anchor biosynthesis

201795_at -0.248 7.021 -2.208 4.298e-02 0.537 -3.913 LBR lamin B receptor 1 -223655826, -223655826 NM_002296 1q42.1 Hs.435166 33

DNA binding

receptor activity

lamin binding

nucleus

nuclear envelope

integral to nuclear inner membrane

membrane

integral to membrane

delta14-sterol reductase activity

 
1557729_at 0.203 5.142 2.208 4.298e-02 0.537 -3.913 LOC100131848 FP2025 10   AK097099 10q26.11 Hs.711375 1    
201296_s_at 0.379 9.058 2.208 4.301e-02 0.537 -3.913 WSB1 WD repeat and SOCS box-containing 1 17 22645232 NM_015626 17q11.1 Hs.446017 21

molecular_function

protein binding

cellular_component

intracellular

intracellular signaling cascade

biological_process

modification-dependent protein catabolic process

 
223254_s_at -0.256 4.410 -2.208 4.301e-02 0.537 -3.913 G2E3 G2/M-phase specific E3 ubiquitin ligase 14 30098079 AA887053 14q12 Hs.509008 Hs.605081 13

protein polyubiquitination

blastocyst development

ubiquitin-protein ligase activity

protein binding

intracellular

nucleus

nucleolus

cytoplasm

Golgi apparatus

protein modification process

multicellular organismal development

zinc ion binding

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

negative regulation of apoptosis

metal ion binding

 
206955_at 0.361 6.920 2.208 4.302e-02 0.538 -3.914 AQP7 aquaporin 7 9 -33374947 NM_001170 9p13 Hs.455323 15

transporter activity

integral to plasma membrane

generation of precursor metabolites and energy

transport

water transport

excretion

water channel activity

glycerol channel activity

glycerol transport

membrane

PPAR signaling pathway

214431_at -0.256 7.161 -2.207 4.305e-02 0.538 -3.914 GMPS guanine monphosphate synthetase 3 157071018 NM_003875 3q24 Hs.591314 11

nucleotide binding

GMP synthase activity

GMP synthase (glutamine-hydrolyzing) activity

ATP binding

cytoplasm

purine nucleotide biosynthetic process

GMP biosynthetic process

glutamine metabolic process

biosynthetic process

purine base biosynthetic process

ligase activity

Purine metabolism

Drug metabolism - other enzymes

Biosynthesis of alkaloids derived from histidine and purine

Metabolic pathways

212785_s_at -0.259 7.489 -2.207 4.305e-02 0.538 -3.914 LARP7 La ribonucleoprotein domain family, member 7 4 113777568, 113778060 AA160181 4q25 Hs.713663 11

nucleotide binding

RNA binding

nucleus

nucleoplasm

cytoplasm

Golgi apparatus

RNA processing

ribonucleoprotein complex

 
209456_s_at -0.235 4.566 -2.207 4.306e-02 0.538 -3.914 FBXW11 F-box and WD repeat domain containing 11 5 -171221160 AB033281 5q35.1 Hs.484138 14

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

cytoplasm

Wnt receptor signaling pathway

protein ubiquitination

modification-dependent protein catabolic process

Ubiquitin mediated proteolysis

Wnt signaling pathway

Hedgehog signaling pathway

227013_at -0.362 8.565 -2.207 4.306e-02 0.538 -3.914 LATS2 LATS, large tumor suppressor, homolog 2 (Drosophila) 13 -20445175 AI535735 13q11-q12 Hs.78960 17

G1/S transition of mitotic cell cycle

nucleotide binding

magnesium ion binding

spindle pole

protein serine/threonine kinase activity

ATP binding

nucleus

cytoplasm

centrosome

protein amino acid phosphorylation

cell cycle

mitosis

protein kinase cascade

hormone-mediated signaling

transferase activity

negative regulation of cyclin-dependent protein kinase activity

cell division

 
1555467_a_at -0.176 5.234 -2.207 4.310e-02 0.538 -3.915 CUGBP1 CUG triplet repeat, RNA binding protein 1 11 -47446520, -47446520, -47446520 AF267533 11p11 Hs.632137 34

nucleotide binding

translation repressor activity, nucleic acid binding

mRNA binding

nucleus

cytoplasm

mRNA splice site selection

mRNA processing

germ cell development

embryonic development

RNA interference

ribonucleoprotein complex

BRE binding

 
221050_s_at 0.363 7.075 2.206 4.313e-02 0.538 -3.916 GTPBP2 GTP binding protein 2 6 -43696195 NM_019096 6p21-p12 Hs.485449 7

nucleotide binding

GTPase activity

GTP binding

 
241433_at 0.278 4.745 2.206 4.314e-02 0.538 -3.916 RCOR3 REST corepressor 3 1 209499330, 209499330, 209499911 AI023806 1q32.2 Hs.356399 10

DNA binding

protein binding

nucleus

nucleolus

cytoplasm

regulation of transcription

 
202595_s_at 0.244 6.046 2.206 4.317e-02 0.538 -3.916 LEPROTL1 leptin receptor overlapping transcript-like 1 8 30072463, 30072463 AF161461 8p21.2-p21.1 Hs.146585 8

membrane

integral to membrane

 
1554806_a_at -0.280 6.320 -2.206 4.318e-02 0.538 -3.917 FBXO8 F-box protein 8 4 -175394384 BC040456 4q34.1 Hs.76917 9

ubiquitin ligase complex

ARF guanyl-nucleotide exchange factor activity

intracellular

ubiquitin-dependent protein catabolic process

regulation of ARF protein signal transduction

 
233990_at -0.159 3.948 -2.206 4.318e-02 0.538 -3.917 C19orf61 chromosome 19 open reading frame 61 19 -48927140 AK022948 19q13.31 Hs.466875 7

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

protein binding

intracellular

 
210027_s_at 0.207 9.080 2.206 4.319e-02 0.538 -3.917 APEX1 APEX nuclease (multifunctional DNA repair enzyme) 1 14 19993129 M80261 14q11.2-q12 Hs.73722 235

magnesium ion binding

DNA binding

transcription coactivator activity

transcription corepressor activity

DNA-(apurinic or apyrimidinic site) lyase activity

endodeoxyribonuclease activity

ribonuclease H activity

phosphodiesterase I activity

uracil DNA N-glycosylase activity

protein binding

intracellular

nucleus

nucleoplasm

cytoplasm

endoplasmic reticulum

centrosome

ribosome

base-excision repair

transcription from RNA polymerase II promoter

response to DNA damage stimulus

3'-5' exonuclease activity

oxidoreductase activity

lyase activity

cell redox homeostasis

perinuclear region of cytoplasm

regulation of DNA binding

Base excision repair

219434_at 0.214 3.237 2.206 4.319e-02 0.538 -3.917 TREM1 triggering receptor expressed on myeloid cells 1 6 -41351689 NM_018643 6p21.1 Hs.283022 42

receptor activity

extracellular region

plasma membrane

plasma membrane

humoral immune response

intracellular signaling cascade

integral to membrane

 
204511_at -0.184 5.305 -2.205 4.324e-02 0.538 -3.918 FARP2 FERM, RhoGEF and pleckstrin domain protein 2 2 241944383 NM_014808 2q37.3 Hs.657318 Hs.679161 9

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

binding

intracellular

cytoplasm

cytoskeleton

cytoskeletal protein binding

neuron remodeling

Rac protein signal transduction

extrinsic to membrane

regulation of Rho protein signal transduction

Adherens junction

232588_at 0.238 4.360 2.205 4.327e-02 0.538 -3.919 STAG1 stromal antigen 1 3 -137538688 AI038943 3q22.3 Hs.412586 11

chromatin

protein binding

nucleus

cell cycle

chromosome segregation

mitosis

cell division

Cell cycle

1555733_s_at 0.157 2.512 2.205 4.327e-02 0.538 -3.919 AP1S3 adaptor-related protein complex 1, sigma 3 subunit 2 -224328290 AF393369 2q36.1 Hs.632555 13

protein binding

Golgi apparatus

cytosol

coated pit

intracellular protein transport

endocytosis

protein transporter activity

membrane

membrane coat

clathrin coat of trans-Golgi network vesicle

clathrin adaptor complex

cytoplasmic vesicle

Lysosome

223212_at -0.248 7.546 -2.205 4.328e-02 0.538 -3.919 ZDHHC16 zinc finger, DHHC-type containing 16 10 99195919, 99195936 BC004535 10q24.1 Hs.76662 6

endoplasmic reticulum

apoptosis

zinc ion binding

acyltransferase activity

membrane

integral to membrane

transferase activity

metal ion binding

 
236288_at -0.290 5.582 -2.204 4.331e-02 0.538 -3.919 RNF34 ring finger protein 34 12 120322284 AW572402 12q24.31 Hs.292804 11

protein binding

nucleus

apoptosis

zinc ion binding

membrane

nuclear speck

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
234734_s_at 0.196 7.362 2.204 4.331e-02 0.538 -3.919 TNRC6A trinucleotide repeat containing 6A 16 24648549 AK025696 16p11.2 Hs.655057 28

nucleotide binding

cytoplasmic mRNA processing body

RNA binding

cytoplasm

regulation of translation

gene silencing by RNA

micro-ribonucleoprotein complex

gene silencing by miRNA, negative regulation of translation

 
229618_at -0.259 5.703 -2.204 4.331e-02 0.538 -3.919 SNX16 sorting nexin 16 8 -82874372 AW150236 8q21.13 Hs.492121 7

protein binding

cell communication

protein transport

phosphoinositide binding

 
211559_s_at -0.334 3.531 -2.204 4.331e-02 0.538 -3.919 CCNG2 cyclin G2 4 78297380 L49506 4q21.1 Hs.13291 12

cell cycle checkpoint

cytoplasm

cell cycle

mitosis

cell division

p53 signaling pathway

230235_at 0.215 6.164 2.204 4.332e-02 0.538 -3.919 MCTS1 malignant T cell amplified sequence 1 X 119621771, 119622579 BE348430 Xq22-q24 Hs.102696 Hs.670803 12

RNA binding

cytoplasm

response to DNA damage stimulus

cell cycle

positive regulation of cell proliferation

regulation of growth

regulation of transcription

 
232013_at -0.219 3.153 -2.204 4.333e-02 0.538 -3.920 C9orf102 chromosome 9 open reading frame 102 9 97677720 AL133663 9q22.32 Hs.432364 4

nucleotide binding

DNA binding

helicase activity

ATP binding

nucleus

DNA repair

response to DNA damage stimulus

ATP-dependent helicase activity

hydrolase activity

 
1558214_s_at -0.176 5.290 -2.203 4.338e-02 0.538 -3.921 CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 5 138117005 BG330076 5q31 Hs.534797 Hs.656653 70

structural molecule activity

protein binding

cytoplasm

plasma membrane

adherens junction

cell adhesion

actin cytoskeleton

vinculin binding

cell junction

apical junction assembly

cadherin binding

Adherens junction

Tight junction

Leukocyte transendothelial migration

Pathways in cancer

Endometrial cancer

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

222151_s_at -0.287 6.749 -2.203 4.339e-02 0.538 -3.921 CEP63 centrosomal protein 63kDa 3 135687264, 135687264, 135687586, 135687736 AK023738 3q22.2 Hs.443301 11

DNA damage checkpoint

spindle pole

protein binding

centrosome

spindle assembly

 
217593_at 0.242 6.065 2.203 4.341e-02 0.538 -3.921 ZSCAN18 zinc finger and SCAN domain containing 18 19 -63310783, -63287021, -63287021 AI375002 19q13.43 Hs.235390 5

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
207871_s_at -0.487 5.548 -2.203 4.342e-02 0.538 -3.922 ST7 suppression of tumorigenicity 7 7 116380616, 116380616 NM_018412 7q31.1-q31.3 Hs.368131 21

membrane

integral to membrane

 
201987_at -0.223 9.704 -2.203 4.343e-02 0.538 -3.922 MED13 mediator complex subunit 13 17 -57374747 AI984051 17q22-q23 Hs.282678 26

receptor activity

nucleus

transcription initiation from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

ligand-dependent nuclear receptor transcription coactivator activity

androgen receptor signaling pathway

vitamin D receptor binding

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

thyroid hormone receptor binding

 
201074_at -0.295 6.544 -2.203 4.344e-02 0.538 -3.922 SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 3 -47602381 AA593983 3p23-p21 Hs.476179 39

chromatin

DNA binding

chromatin binding

transcription coactivator activity

intracellular

nucleus

nucleoplasm

chromatin assembly or disassembly

chromatin remodeling

regulation of transcription from RNA polymerase II promoter

protein C-terminus binding

organ morphogenesis

SWI/SNF complex

regulation of transcription

positive regulation of transcription, DNA-dependent

protein N-terminus binding

 
201742_x_at -0.635 6.844 -2.203 4.344e-02 0.538 -3.922 SFRS1 splicing factor, arginine/serine-rich 1 17 -53433278 NM_006924 17q21.3-q22 Hs.68714 106

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

spliceosomal complex

cytoplasm

mRNA splice site selection

RNA splicing

nuclear speck

 
1566701_at -0.184 4.492 -2.203 4.345e-02 0.538 -3.922 VRK3 vaccinia related kinase 3 19 -55171535 AK074461 19q13 Hs.443330 7

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

transferase activity

 
210095_s_at 0.391 6.516 2.202 4.346e-02 0.538 -3.922 IGFBP3 insulin-like growth factor binding protein 3 7 -45918368 M31159 7p13-p12 Hs.450230 Hs.697535 324

regulation of cell growth

osteoblast differentiation

negative regulation of protein amino acid phosphorylation

extracellular region

nucleus

protein tyrosine phosphatase activator activity

negative regulation of signal transduction

negative regulation of smooth muscle cell migration

insulin-like growth factor binding protein complex

insulin-like growth factor I binding

positive regulation of apoptosis

positive regulation of myoblast differentiation

metal ion binding

negative regulation of smooth muscle cell proliferation

p53 signaling pathway

223741_s_at 0.227 6.628 2.202 4.348e-02 0.538 -3.923 TTYH2 tweety homolog 2 (Drosophila) 17 69721290, 69756099 BC004233 17q25.1 Hs.27935 8

ion channel activity

chloride channel activity

calcium ion binding

protein binding

plasma membrane

ion transport

integral to membrane

chloride ion binding

chloride channel complex

 
203684_s_at -0.459 5.618 -2.202 4.352e-02 0.538 -3.924 BCL2 B-cell CLL/lymphoma 2 18 -59136166, -58941558 M13994 18q21.3 18q21.33 Hs.150749 705

G1/S transition of mitotic cell cycle

protein phosphatase type 2A complex

cell morphogenesis

response to acid

ovarian follicle development

ureteric bud development

branching involved in ureteric bud morphogenesis

behavioral fear response

response to hypoxia

B cell homeostasis

release of cytochrome c from mitochondria

regulation of cell-matrix adhesion

protease binding

lymphoid progenitor cell differentiation

B cell lineage commitment

T cell lineage commitment

immune system development

renal system process

intracellular

membrane fraction

nucleus

cytoplasm

mitochondrion

mitochondrial outer membrane

mitochondrial outer membrane

mitochondrial outer membrane

endoplasmic reticulum

endoplasmic reticulum membrane

microsome

cytosol

calcineurin complex

protein amino acid dephosphorylation

melanin metabolic process

oxygen and reactive oxygen species metabolic process

regulation of nitrogen utilization

anti-apoptosis

humoral immune response

response to oxidative stress

actin filament organization

female pregnancy

cell aging

response to nutrient

transcription factor binding

cell death

positive regulation of cell proliferation

male gonad development

activation of pro-apoptotic gene products

response to radiation

response to heat

response to external stimulus

response to toxin

post-embryonic development

organ morphogenesis

response to inorganic substance

response to iron ion

response to UV-B

response to gamma radiation

regulation of gene expression

negative regulation of calcium ion transport into cytosol

regulation of glycoprotein biosynthetic process

mesenchymal cell development

positive regulation of neuron maturation

positive regulation of smooth muscle cell migration

membrane

integral to membrane

cell-cell adhesion

transcription activator activity

peptidyl-threonine phosphorylation

cochlear nucleus development

gland morphogenesis

hemopoiesis

negative regulation of ossification

negative regulation of cell growth

negative regulation of cell migration

response to caffeine

hair follicle morphogenesis

axon regeneration

regulation of protein stability

nuclear membrane

endoplasmic reticulum calcium ion homeostasis

glomerulus development

negative regulation of cellular pH reduction

regulation of protein localization

negative regulation of myeloid cell apoptosis

T cell differentiation in the thymus

positive regulation of peptidyl-serine phosphorylation

negative regulation of osteoblast proliferation

response to cytokine stimulus

response to nicotine

organ growth

positive regulation of multicellular organism growth

B cell proliferation

response to drug

response to hydrogen peroxide

protein homodimerization activity

T cell homeostasis

positive regulation of catalytic activity

myelin sheath

CD8-positive, alpha-beta T cell lineage commitment

response to peptide hormone stimulus

regulation of protein homodimerization activity

regulation of protein heterodimerization activity

negative regulation of neuron apoptosis

ear development

response to estrogen stimulus

regulation of viral genome replication

response to ethanol

positive regulation of melanocyte differentiation

negative regulation of mitotic cell cycle

negative regulation of retinal cell programmed cell death

regulation of mitochondrial membrane permeability

protein heterodimerization activity

focal adhesion formation

positive regulation of pigmentation during development

spleen development

thymus development

gut morphogenesis

developmental growth

oocyte development

positive regulation of skeletal muscle fiber development

pigment granule organization

homeostasis of number of cells within a tissue

response to glucocorticoid stimulus

BH3 domain binding

defense response to virus

regulation of cell cycle

response to protein stimulus

regulation of mitochondrial membrane potential

negative regulation of mitochondrial depolarization

regulation of calcium ion transport

apoptosis in response to endoplasmic reticulum stress

Apoptosis

Focal adhesion

Neurotrophin signaling pathway

Amyotrophic lateral sclerosis (ALS)

Pathways in cancer

Colorectal cancer

Prostate cancer

Small cell lung cancer

233341_s_at 0.268 5.719 2.201 4.359e-02 0.539 -3.925 POLR1B polymerase (RNA) I polypeptide B, 128kDa 2 113015962 AK025574 2q13 Hs.86337 21

DNA binding

DNA-directed RNA polymerase activity

protein binding

nucleus

nucleoplasm

nucleolus

transcription

zinc ion binding

transferase activity

nucleotidyltransferase activity

ribonucleoside binding

metal ion binding

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

214252_s_at 0.303 5.333 2.199 4.373e-02 0.540 -3.928 CLN5 ceroid-lipofuscinosis, neuronal 5 13 76464059 AV700514 13q21.1-q32 Hs.30213 19

protein binding

lysosomal membrane

vacuolar lumen

endoplasmic reticulum

Golgi apparatus

lysosomal lumen acidification

brain development

visual perception

integral to membrane

integral to membrane

neurogenesis

protein catabolic process

neuron maturation

perinuclear region of cytoplasm

Lysosome

219737_s_at -0.540 5.413 -2.199 4.374e-02 0.540 -3.928 PCDH9 protocadherin 9 13 -65774967 AI524125 13q14.3-q21.1 Hs.654709 Hs.719302 8

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

 
225425_s_at 0.339 9.587 2.199 4.375e-02 0.540 -3.928 MRPL41 mitochondrial ribosomal protein L41 9 139566129 AV726260 9q34.3 Hs.44017 10

structural constituent of ribosome

mitochondrion

mitochondrial large ribosomal subunit

ribosome

translation

apoptosis

cell cycle

 
203394_s_at -0.918 7.645 -2.199 4.377e-02 0.540 -3.928 HES1 hairy and enhancer of split 1, (Drosophila) 3 195336627 BE973687 3q28-q29 Hs.250666 44

in utero embryonic development

liver development

DNA binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

cell adhesion

positive regulation of cell proliferation

positive regulation of specific transcription from RNA polymerase II promoter

negative regulation of specific transcription from RNA polymerase II promoter

transcription repressor activity

midbrain-hindbrain boundary morphogenesis

oculomotor nerve development

trochlear nerve development

hindbrain morphogenesis

neural tube development

pituitary gland development

lung development

midbrain development

auditory receptor cell fate determination

cell fate commitment

negative regulation of auditory receptor cell differentiation

negative regulation of neuron differentiation

cell maturation

cell morphogenesis involved in neuron differentiation

regulation of neurogenesis

regulation of timing of neuron differentiation

Notch signaling pathway

Maturity onset diabetes of the young

219253_at -0.358 5.031 -2.198 4.379e-02 0.540 -3.929 TMEM185B transmembrane protein 185B (pseudogene) 2 -120695323 NM_024121 2q14.2 Hs.376722 5

membrane

integral to membrane

 
217140_s_at -0.460 10.886 -2.198 4.380e-02 0.540 -3.929 VDAC1 voltage-dependent anion channel 1 5 -133335505 AJ002428 5q31 Hs.519320 Hs.709372 73

behavioral fear response

protein binding

mitochondrion

mitochondrial outer membrane

mitochondrial inner membrane

plasma membrane

anion transport

apoptosis

nerve-nerve synaptic transmission

learning

voltage-gated anion channel activity

voltage-gated anion channel activity

mitochondrial nucleoid

interspecies interaction between organisms

pore complex

Calcium signaling pathway

Parkinson's disease

Huntington's disease

217843_s_at -0.259 7.886 -2.198 4.381e-02 0.540 -3.929 MED4 mediator complex subunit 4 13 -47548092 NM_014166 13q14.2 Hs.181112 21

transcription cofactor activity

receptor activity

protein binding

nucleus

nucleolus

cytoplasm

regulation of transcription from RNA polymerase II promoter

transcription initiation from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

transcription activator activity

ligand-dependent nuclear receptor transcription coactivator activity

androgen receptor signaling pathway

vitamin D receptor binding

regulation of transcription

thyroid hormone receptor binding

 
218652_s_at 0.264 6.682 2.198 4.382e-02 0.540 -3.929 PIGG phosphatidylinositol glycan anchor biosynthesis, class G 4 482988 NM_017733 4p16.3 Hs.7099 8

protein binding

endoplasmic reticulum

endoplasmic reticulum membrane

metabolic process

membrane

integral to membrane

preassembly of GPI anchor in ER membrane

transferase activity

phosphotransferase activity, for other substituted phosphate groups

CP2 mannose-ethanolamine phosphotransferase activity

Glycosylphosphatidylinositol(GPI)-anchor biosynthesis

215377_at -0.220 5.267 -2.198 4.383e-02 0.540 -3.930 CTBP2 C-terminal binding protein 2 10 -126666407, -126666407, -126666407 AK024129 10q26.13 Hs.501345 32

nucleus

negative regulation of cell proliferation

oxidoreductase activity

oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

viral genome replication

cell junction

synapse

cofactor binding

NAD or NADH binding

oxidation reduction

Wnt signaling pathway

Notch signaling pathway

Pathways in cancer

Chronic myeloid leukemia

212286_at -0.412 5.053 -2.198 4.385e-02 0.540 -3.930 ANKRD12 ankyrin repeat domain 12 18 9126757 AW572909 18p11.22 Hs.464585 7

nucleus

 
202850_at -0.320 9.111 -2.198 4.387e-02 0.540 -3.930 ABCD3 ATP-binding cassette, sub-family D (ALD), member 3 1 94656520, 94656520 NM_002858 1p22-p21 Hs.700576 25

nucleotide binding

protein binding

ATP binding

peroxisome

peroxisomal membrane

integral to peroxisomal membrane

transport

peroxisome organization

peroxisomal long-chain fatty acid import

membrane

integral to membrane

ATPase activity

ATPase activity, coupled to transmembrane movement of substances

ABC transporters

225875_s_at 0.411 5.897 2.197 4.389e-02 0.540 -3.931 NIPAL3 NIPA-like domain containing 3 1 24614831 T84558 1p36.12-p35.1 Hs.523442 6

membrane

integral to membrane

 
226367_at -0.207 2.972 -2.197 4.389e-02 0.540 -3.931 KDM5A lysine (K)-specific demethylase 5A 12 -259483 AA854032 12p11 Hs.76272 25

transcription factor activity

iron ion binding

protein binding

intracellular

nucleus

nucleolus

cytoplasm

transcription from RNA polymerase II promoter

multicellular organismal development

zinc ion binding

oxidoreductase activity

transcription activator activity

chromatin modification

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

cyclin-dependent protein kinase activating kinase holoenzyme complex

positive regulation of transcription

metal ion binding

oxidation reduction

 
214022_s_at 0.443 8.409 2.197 4.394e-02 0.541 -3.932 IFITM1 interferon induced transmembrane protein 1 (9-27) 11 303990 AA749101 11p15.5 Hs.458414 16

receptor signaling protein activity

protein binding

plasma membrane

cell surface receptor linked signal transduction

negative regulation of cell proliferation

response to biotic stimulus

integral to membrane

B cell receptor signaling pathway

226149_at 0.227 5.998 2.197 4.395e-02 0.541 -3.932 SNHG11 small nucleolar RNA host gene 11 (non-protein coding) 20 36508710 AW661805 20q11.23 Hs.16936 2    
208633_s_at -0.314 6.467 -2.196 4.396e-02 0.541 -3.932 MACF1 microtubule-actin crosslinking factor 1 1 39319704, 39569396 W61052 1p32-p31 Hs.580782 25

calcium ion binding

calcium ion binding

protein binding

cytoplasm

cytoplasm

cytoskeleton

cytoskeleton

cell cycle arrest

microtubule binding

biological_process

actin filament binding

 
202241_at -0.671 8.827 -2.196 4.398e-02 0.541 -3.933 TRIB1 tribbles homolog 1 (Drosophila) 8 126511744 NM_025195 8q24.13 Hs.444947 19

protein kinase activity

protein kinase inhibitor activity

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

negative regulation of protein kinase activity

JNK cascade

transcription factor binding

negative regulation of smooth muscle cell migration

mitogen-activated protein kinase kinase binding

negative regulation of lipopolysaccharide-mediated signaling pathway

response to lipopolysaccharide

regulation of MAP kinase activity

negative regulation of transcription factor activity

negative regulation of smooth muscle cell proliferation

 
204414_at -0.195 2.852 -2.196 4.401e-02 0.541 -3.933 LARGE like-glycosyltransferase 22 -31999061 NM_004737 22q12.3 Hs.474667 18

Golgi apparatus

N-acetylglucosamine metabolic process

protein amino acid glycosylation

glycosphingolipid biosynthetic process

acetylglucosaminyltransferase activity

membrane

integral to membrane

transferase activity, transferring glycosyl groups

integral to Golgi membrane

muscle maintenance

 
1564285_at -0.267 2.810 -2.196 4.402e-02 0.541 -3.933 HFM1 HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae) 1 -91498910 AK096330 1p22.2 Hs.454818 3

nucleotide binding

nucleic acid binding

helicase activity

ATP binding

ATP-dependent helicase activity

hydrolase activity

 
241709_s_at -0.220 4.830 -2.195 4.405e-02 0.541 -3.934 DOCK1 dedicator of cytokinesis 1 10 128584012 AA599017 10q26.13-q26.3 Hs.159195 Hs.645702 39

guanyl-nucleotide exchange factor activity

GTPase activator activity

protein binding

cytoplasm

phagocytosis, engulfment

apoptosis

signal transduction

integrin-mediated signaling pathway

small GTPase mediated signal transduction

membrane

SH3 domain binding

Focal adhesion

Regulation of actin cytoskeleton

228352_at -0.193 5.160 -2.195 4.405e-02 0.541 -3.934 UNC13D unc-13 homolog D (C. elegans) 17 -71334901 AW189167 17q25.1 Hs.41045 21

granuloma formation

germinal center formation

cytoplasm

exocytosis

phagocytosis

membrane

natural killer cell degranulation

defense response to virus

 
1567628_at 0.210 4.600 2.195 4.406e-02 0.541 -3.934 CD74 CD74 molecule, major histocompatibility complex, class II invariant chain 5 -149761394, -149761392 M28590 5q32 Hs.436568 58

prostaglandin biosynthetic process

intracellular

protein complex assembly

intracellular protein transport

immune response

signal transduction

cell proliferation

membrane

integral to membrane

immunoglobulin mediated immune response

antigen processing and presentation of endogenous antigen

cytokine binding

MHC class II protein binding

identical protein binding

regulation of macrophage activation

negative regulation of apoptosis

T cell selection

Antigen processing and presentation

211009_s_at -0.415 6.617 -2.195 4.407e-02 0.541 -3.934 ZNF271 zinc finger protein 271 18 31124233 AF159567 18q12 Hs.718598 Hs.718962 6    
206057_x_at -0.551 5.591 -2.195 4.409e-02 0.541 -3.935 SPN sialophorin 16 29581800, 29582080 NM_003123 16p11.2 Hs.632188 44

response to protozoan

negative regulation of type IV hypersensitivity

uropod

transmembrane receptor activity

protein binding

basement membrane

extracellular space

integral to plasma membrane

chemotaxis

cellular defense response

negative regulation of cell adhesion

establishment or maintenance of cell polarity

cell surface receptor linked signal transduction

bacterial binding

induction of apoptosis by extracellular signals

external side of plasma membrane

membrane

T cell costimulation

positive regulation of T cell proliferation

negative regulation of T cell proliferation

positive regulation of tumor necrosis factor biosynthetic process

defense response to bacterium

negative thymic T cell selection

regulation of defense response to virus

regulation of immune response

Cell adhesion molecules (CAMs)

1554360_at 0.240 3.351 2.195 4.411e-02 0.541 -3.935 FCHSD2 FCH and double SH3 domains 2 11 -72225437 BC010394 11q13.4 Hs.577053 9

protein binding

 
212269_s_at 0.274 7.658 2.194 4.414e-02 0.541 -3.936 MCM3AP minichromosome maintenance complex component 3 associated protein 21 -46479475 AJ010089 21q22.3 Hs.389037 19

DNA binding

nucleus

cytoplasm

cytosol

DNA replication

protein import into nucleus

 
229360_at 0.372 4.243 2.194 4.415e-02 0.541 -3.936 ZNF280B zinc finger protein 280B 22 -21168771 N22886 22q11.22 Hs.43834 6

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
230425_at -0.656 5.422 -2.194 4.415e-02 0.541 -3.936 EPHB1 EPH receptor B1 3 135996949 AI674183 3q21-q23 Hs.116092 41

nucleotide binding

receptor activity

ephrin receptor activity

protein binding

ATP binding

plasma membrane

integral to plasma membrane

protein amino acid phosphorylation

signal transduction

transmembrane receptor protein tyrosine kinase signaling pathway

nervous system development

transferase activity

Axon guidance

210139_s_at -0.518 8.473 -2.194 4.415e-02 0.541 -3.936 PMP22 peripheral myelin protein 22 17 -15073821, -15073821, -15073820 L03203 17p12-p11.2 Hs.372031 107

synaptic transmission

peripheral nervous system development

membrane

integral to membrane

myelin assembly

 
206756_at 0.307 5.148 2.194 4.420e-02 0.542 -3.937 CHST7 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 X 46318135 NM_019886 Xp11.23 Hs.129955 10

Golgi membrane

N-acetylglucosamine 6-O-sulfotransferase activity

Golgi apparatus

polysaccharide metabolic process

N-acetylglucosamine metabolic process

sulfur metabolic process

chondroitin 6-sulfotransferase activity

membrane

integral to membrane

integral to membrane

transferase activity

chondroitin sulfate biosynthetic process

Chondroitin sulfate biosynthesis

229764_at -1.526 4.095 -2.193 4.423e-02 0.542 -3.937 TPRG1 tumor protein p63 regulated 1 3 190372456 AW629527 3q28 Hs.338851 4

cytoplasm

 
217984_at 0.266 6.335 2.193 4.425e-02 0.542 -3.938 RNASET2 ribonuclease T2 6 -167262993 NM_003730 6q27 Hs.529989 11

RNA binding

endonuclease activity

ribonuclease activity

extracellular region

RNA catabolic process

hydrolase activity

ribonuclease T2 activity

 
200737_at -0.490 8.965 -2.192 4.430e-02 0.542 -3.939 PGK1 phosphoglycerate kinase 1 X 77246321 NM_000291 Xq13 Hs.78771 52

nucleotide binding

phosphoglycerate kinase activity

ATP binding

cytoplasm

glycolysis

phosphorylation

transferase activity

Glycolysis / Gluconeogenesis

Carbon fixation in photosynthetic organisms

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

201754_at 0.161 12.249 2.192 4.432e-02 0.542 -3.939 COX6C cytochrome c oxidase subunit VIc 8 -100959547 NM_004374 8q22-q23 Hs.351875 10

cytochrome-c oxidase activity

mitochondrion

mitochondrial inner membrane

generation of precursor metabolites and energy

membrane

integral to membrane

Oxidative phosphorylation

Metabolic pathways

Cardiac muscle contraction

Alzheimer's disease

Parkinson's disease

Huntington's disease

211779_x_at 0.210 6.385 2.192 4.433e-02 0.542 -3.939 AP2A2 adaptor-related protein complex 2, alpha 2 subunit 11 915840 BC006155 11p15.5 Hs.19121 41

protein binding

cytosol

plasma membrane

plasma membrane

coated pit

intracellular protein transport

endocytosis

lipid binding

protein transporter activity

membrane coat

AP-2 adaptor complex

regulation of defense response to virus by virus

Endocytosis

Huntington's disease

229060_at 0.471 5.616 2.192 4.434e-02 0.542 -3.940 YPEL2 yippee-like 2 (Drosophila) 17 54763834 AW005748 17q22 Hs.463613 5

nucleus

nucleolus

 
212482_at -0.453 8.151 -2.192 4.435e-02 0.542 -3.940 RMND5A required for meiotic nuclear division 5 homolog A (S. cerevisiae) 2 86800924 BF671894 2p11.2 Hs.75277 7    
1565483_at 0.423 7.780 2.192 4.437e-02 0.542 -3.940 EGFR epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) 7 55054218, 55054218, 55054218, 55054218 AF277897 7p12 Hs.488293 1458

nucleotide binding

cell morphogenesis

ossification

double-stranded DNA binding

MAP/ERK kinase kinase activity

transmembrane receptor activity

epidermal growth factor receptor activity

epidermal growth factor receptor activity

ATP binding

extracellular region

extracellular space

intracellular

nucleus

cytoplasm

endosome

plasma membrane

plasma membrane

response to stress

cell surface receptor linked signal transduction

epidermal growth factor receptor signaling pathway

activation of phospholipase C activity

salivary gland morphogenesis

integral to membrane

basolateral plasma membrane

cell-cell adhesion

transferase activity

protein phosphatase binding

AP-2 adaptor complex

endocytic vesicle

nitric-oxide synthase regulator activity

positive regulation of cell migration

positive regulation of cyclin-dependent protein kinase activity during G1/S

positive regulation of phosphorylation

identical protein binding

activation of phospholipase A2 activity by calcium-mediated signaling

positive regulation of MAP kinase activity

positive regulation of nitric oxide biosynthetic process

protein amino acid autophosphorylation

protein heterodimerization activity

positive regulation of epithelial cell proliferation

regulation of peptidyl-tyrosine phosphorylation

regulation of nitric-oxide synthase activity

actin filament binding

protein insertion into membrane

response to UV-A

Shc-EGFR complex

MAPK signaling pathway

ErbB signaling pathway

Calcium signaling pathway

Cytokine-cytokine receptor interaction

Endocytosis

Dorso-ventral axis formation

Focal adhesion

Adherens junction

Gap junction

Regulation of actin cytoskeleton

GnRH signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Colorectal cancer

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Bladder cancer

Non-small cell lung cancer

228448_at 0.184 4.154 2.192 4.437e-02 0.542 -3.940 MAP6 microtubule-associated protein 6 11 -74991552, -74975610 AL134650 11q13.5 Hs.585540 12

calmodulin binding

cytoplasm

Golgi apparatus

cytoskeleton

microtubule

 
212131_at -0.386 8.418 -2.191 4.439e-02 0.542 -3.940 LSM14A LSM14A, SCD6 homolog A (S. cerevisiae) 19 39355191 BG054966 19q13.11 Hs.718430 6    
224150_s_at 0.405 5.950 2.191 4.439e-02 0.542 -3.940 CEP70 centrosomal protein 70kDa 3 -139695876 AF289495 3q22-q23 Hs.531962 9

protein binding

centrosome

 
1564838_a_at 0.218 3.523 2.191 4.439e-02 0.542 -3.941 LOC151760 hypothetical LOC151760 3   BC038577 3q13.13 Hs.124136 1    
200769_s_at -0.364 6.068 -2.191 4.441e-02 0.542 -3.941 MAT2A methionine adenosyltransferase II, alpha 2 85619798 NM_005911 2p11.2 Hs.516157 18

nucleotide binding

magnesium ion binding

methionine adenosyltransferase activity

protein binding

ATP binding

S-adenosylmethionine biosynthetic process

one-carbon metabolic process

circadian rhythm

response to light stimulus

response to hormone stimulus

transferase activity

potassium ion binding

response to drug

cobalt ion binding

response to cAMP

Cysteine and methionine metabolism

Selenoamino acid metabolism

Biosynthesis of plant hormones

Metabolic pathways

219882_at -0.309 5.188 -2.191 4.443e-02 0.542 -3.941 TTLL7 tubulin tyrosine ligase-like family, member 7 1 -84107644 NM_024686 1p31.1 Hs.445826 7

tubulin-tyrosine ligase activity

cilium

microtubule basal body

protein modification process

multicellular organismal development

nervous system development

ligase activity

cell differentiation

dendrite

perikaryon

 
232898_at 0.264 4.807 2.191 4.445e-02 0.542 -3.942 DAB2 disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila) 5 -39407536 R79120 5p13 Hs.481980 47

coated pit

protein C-terminus binding

cell proliferation

membrane

clathrin coated vesicle membrane

cytoplasmic vesicle

Endocytosis

221143_at -0.505 4.456 -2.190 4.447e-02 0.542 -3.942 RPA4 replication protein A4, 34kDa X 96025667 NM_013347 Xq21.33 Hs.659349 9

nucleic acid binding

single-stranded DNA binding

nucleus

DNA replication factor A complex

DNA replication

DNA replication initiation

DNA replication

Nucleotide excision repair

Mismatch repair

Homologous recombination

206329_at 0.397 6.287 2.190 4.449e-02 0.542 -3.942 EXTL1 exostoses (multiple)-like 1 1 26220857 NM_004455 1p36.1 Hs.150956 11

skeletal system development

protein binding

endoplasmic reticulum

membrane

integral to membrane

transferase activity, transferring hexosyl groups

intrinsic to endoplasmic reticulum membrane

glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity

Heparan sulfate biosynthesis

Metabolic pathways

1553185_at -0.390 9.804 -2.190 4.450e-02 0.542 -3.943 RASEF RAS and EF-hand domain containing 9 -84787136 NM_152573 9q21.32 Hs.657750 3

nucleotide binding

calcium ion binding

GTP binding

cytoplasm

small GTPase mediated signal transduction

protein transport

perinuclear region of cytoplasm

 
228601_at 0.234 4.627 2.190 4.451e-02 0.542 -3.943 LOC401022 hypothetical LOC401022 2   AW340112 2q31.2 Hs.98661 1    
236866_at 0.237 4.787 2.190 4.451e-02 0.542 -3.943 GALNS galactosamine (N-acetyl)-6-sulfate sulfatase 16 -87407642 AA884446 16q24.3 Hs.271383 39

N-acetylgalactosamine-4-sulfatase activity

calcium ion binding

lysosome

metabolic process

hydrolase activity

glycosaminoglycan metabolic process

N-acetylgalactosamine-6-sulfatase activity

Glycosaminoglycan degradation

Metabolic pathways

Lysosome

201146_at -0.330 8.217 -2.190 4.452e-02 0.542 -3.943 NFE2L2 nuclear factor (erythroid-derived 2)-like 2 2 -177803279, -177803278 NM_006164 2q31 Hs.715540 141

transcription factor activity

nucleus

cytoplasm

cytosol

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

sequence-specific DNA binding

protein dimerization activity

 
213803_at -0.304 7.794 -2.190 4.453e-02 0.542 -3.943 KPNB1 karyopherin (importin) beta 1 17 43082273 BG545463 17q21.32 Hs.532793 Hs.706168 113

protein import into nucleus, docking

protein import into nucleus, translocation

nucleus

nuclear pore

nucleoplasm

cytoplasm

cytosol

NLS-bearing substrate import into nucleus

ribosomal protein import into nucleus

nuclear localization sequence binding

zinc ion binding

protein transporter activity

protein domain specific binding

interspecies interaction between organisms

 
201051_at 0.250 9.005 2.189 4.455e-02 0.542 -3.944 ANP32A acidic (leucine-rich) nuclear phosphoprotein 32 family, member A 15 -66857930 BE560202 15q22.3-q23 Hs.458747 44

protein binding

nucleus

cytoplasm

endoplasmic reticulum

nucleocytoplasmic transport

nucleocytoplasmic transport

intracellular signaling cascade

regulation of transcription

perinuclear region of cytoplasm

 
232708_at 0.196 4.261 2.189 4.457e-02 0.542 -3.944 GALT galactose-1-phosphate uridylyltransferase 9 34636634 AA453223 9p13 Hs.522090 72

iron ion binding

cytosol

carbohydrate metabolic process

galactose metabolic process

UDP-glucose:hexose-1-phosphate uridylyltransferase activity

UDP-glucose:hexose-1-phosphate uridylyltransferase activity

zinc ion binding

transferase activity

nucleotidyltransferase activity

metal ion binding

Galactose metabolism

Amino sugar and nucleotide sugar metabolism

Metabolic pathways

218537_at -0.647 8.793 -2.189 4.459e-02 0.542 -3.944 HCFC1R1 host cell factor C1 regulator 1 (XPO1 dependent) 16 -3012626 NM_017885 16p13.3 Hs.719259 2

nucleus

cytoplasm

 
201669_s_at 0.389 7.646 2.189 4.462e-02 0.542 -3.945 MARCKS myristoylated alanine-rich protein kinase C substrate 6 114285219 NM_002356 6q22.2 Hs.519909 Hs.712721 41

protein kinase C binding

calmodulin binding

cytoplasm

centrosome

cell cortex

actin cytoskeleton

membrane

germinal vesicle

actin filament binding

Fc gamma R-mediated phagocytosis

211979_at -0.215 6.652 -2.188 4.465e-02 0.542 -3.946 GPR107 G protein-coupled receptor 107 9 131855805 AB046844 9q34.11 Hs.512461 7

membrane

integral to membrane

 
221879_at 0.896 4.667 2.188 4.466e-02 0.542 -3.946 CALML4 calmodulin-like 4 15 -66270096 AA886335 15q23 Hs.709550 4

calcium ion binding

 
1563511_at 0.354 5.231 2.188 4.468e-02 0.543 -3.946 DKFZp451B082 hypothetical gene supported by AL831931 6   AL831931 6q26 Hs.444817      
220967_s_at -0.154 5.572 -2.187 4.475e-02 0.543 -3.947 ZNF696 zinc finger protein 696 8 144444933 NM_030895 8q24.3 Hs.512740 2

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
208945_s_at -0.310 8.493 -2.187 4.477e-02 0.543 -3.948 BECN1 beclin 1, autophagy related 17 -38215675 NM_003766 17q21 Hs.716464 56

protein binding

cytoplasm

Golgi apparatus

trans-Golgi network

autophagy

anti-apoptosis

cellular defense response

negative regulation of cell proliferation

response to virus

membrane

cytoplasmic membrane-bounded vesicle

positive regulation of macroautophagy

protein complex

Regulation of autophagy

208709_s_at -0.236 9.962 -2.187 4.479e-02 0.543 -3.948 NRD1 nardilysin (N-arginine dibasic convertase) 1 -52027453 U64898 1p32.2-p32.1 Hs.584782 18

metalloendopeptidase activity

protein binding

cytosol

proteolysis

neuromuscular junction development

peptidase activity

zinc ion binding

cell proliferation

cell surface

cell migration

metal ion binding

epidermal growth factor binding

positive regulation of membrane protein ectodomain proteolysis

regulation of endopeptidase activity

 
226486_at 0.334 5.870 2.186 4.481e-02 0.543 -3.948 MTERFD2 MTERF domain containing 2 2 -241683654, -241675182 AA115760 2q37.3 Hs.159556 5    
242149_at -0.449 6.084 -2.186 4.481e-02 0.543 -3.949 C18orf19 chromosome 18 open reading frame 19 18 -13653345 R02709 18p11.21 Hs.13034 3

membrane

integral to membrane

 
1552899_at 0.333 4.863 2.186 4.485e-02 0.543 -3.949 RP4-662A9.2 hypothetical protein MGC34034 6 134183977 NM_153224 6q23.2 Hs.126165 1    
204629_at 0.247 6.712 2.186 4.486e-02 0.543 -3.949 PARVB parvin, beta 22 42726505, 42751500 NM_013327 22q13.2-q13.33 Hs.475074 18

actin binding

protein binding

cytoplasm

cytoskeleton

plasma membrane

focal adhesion

cell adhesion

cell junction

Focal adhesion

207345_at 0.213 3.767 2.186 4.487e-02 0.543 -3.950 FST follistatin 5 52812351 NM_006350 5q11.2 Hs.9914 47

negative regulation of transcription from RNA polymerase II promoter

signal transducer activity

protein binding

extracellular region

multicellular organismal development

negative regulation of follicle-stimulating hormone secretion

positive regulation of hair follicle development

TGF-beta signaling pathway

244721_at 0.209 4.696 2.186 4.487e-02 0.543 -3.950 TP53INP1 tumor protein p53 inducible nuclear protein 1 8 -96007376 AW242000 8q22 Hs.492261 16

nucleus

apoptosis

 
204794_at -0.238 5.226 -2.186 4.487e-02 0.543 -3.950 DUSP2 dual specificity phosphatase 2 2 -96172634 NM_004418 2q11 Hs.1183 16

inactivation of MAPK activity

protein tyrosine phosphatase activity

nucleus

protein amino acid dephosphorylation

protein tyrosine/threonine phosphatase activity

hydrolase activity

MAP kinase tyrosine/serine/threonine phosphatase activity

mitogen-activated protein kinase binding

MAPK signaling pathway

224600_at -0.427 6.679 -2.185 4.490e-02 0.543 -3.950 CGGBP1 CGG triplet repeat binding protein 1 3 -88183789 BE501318 3p12-p11.1 Hs.444818 14

DNA binding

double-stranded DNA binding

nucleus

regulation of transcription

 
238034_at 0.269 6.690 2.185 4.491e-02 0.543 -3.950 CANX calnexin 5 179058535 AI890021 5q35 Hs.699155 90

calcium ion binding

sugar binding

endoplasmic reticulum

protein folding

protein secretion

membrane

integral to membrane

melanosome

unfolded protein binding

Antigen processing and presentation

212381_at -0.592 6.939 -2.185 4.493e-02 0.543 -3.951 USP24 ubiquitin specific peptidase 24 1 -55304619 BF444943 1p32.3 Hs.477009 13

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
219807_x_at 0.172 6.340 2.185 4.493e-02 0.543 -3.951 RAB4B RAB4B, member RAS oncogene family 19 45976010 NM_016154 19q13.2 Hs.631539 5

nucleotide binding

GTPase activity

GTP binding

intracellular

plasma membrane

small GTPase mediated signal transduction

protein transport

vesicle-mediated transport

 
210088_x_at 0.226 6.645 2.185 4.494e-02 0.543 -3.951 MYL4 myosin, light chain 4, alkali; atrial, embryonic 17 42641426, 42641712 M36172 17q21-qter Hs.463300 21

regulation of the force of heart contraction

motor activity

actin monomer binding

calcium ion binding

muscle myosin complex

muscle organ development

structural constituent of muscle

myosin complex

A band

myosin II heavy chain binding

positive regulation of ATPase activity

actin filament binding

cardiac muscle contraction

Cardiac muscle contraction

221816_s_at 0.301 7.470 2.185 4.496e-02 0.543 -3.951 PHF11 PHD finger protein 11 13 48967801, 48968528 BF055474 13q14.2 Hs.369039 17

protein binding

zinc ion binding

metal ion binding

 
218084_x_at 0.239 6.036 2.185 4.496e-02 0.543 -3.951 FXYD5 FXYD domain containing ion transport regulator 5 19 40337466 NM_014164 19q12-q13.1 Hs.333418 20

actin binding

ion channel activity

ion transport

membrane

integral to membrane

microvillus assembly

cadherin binding

negative regulation of calcium-dependent cell-cell adhesion

 
204806_x_at 0.285 8.027 2.184 4.499e-02 0.543 -3.952 HLA-F major histocompatibility complex, class I, F 6 29799095, 29799095, 1143812, 1143812, 945922, 945922 NM_018950 6p21.3 Hs.519972 68

antigen processing and presentation of peptide antigen via MHC class I

immune response

membrane

integral to membrane

antigen processing and presentation

MHC class I receptor activity

MHC class I protein complex

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

212641_at -0.338 6.102 -2.184 4.502e-02 0.543 -3.953 HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 6 -143114296 AL023584 6q23-q24 Hs.510172 10

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
200835_s_at -0.348 8.763 -2.184 4.503e-02 0.543 -3.953 MAP4 microtubule-associated protein 4 3 -47989573, -47867183, -47867183 AI553791 3p21 Hs.517949 40

structural molecule activity

protein binding

microtubule

microtubule associated complex

negative regulation of microtubule depolymerization

 
233322_at 0.216 5.124 2.183 4.507e-02 0.543 -3.954 CD9 CD9 molecule 12 6179815 AK025016 12p13.3 Hs.114286 96

protein binding

plasma membrane

plasma membrane

integral to plasma membrane

cell motion

cell adhesion

fusion of sperm to egg plasma membrane

platelet activation

paranodal junction assembly

platelet alpha granule membrane

Hematopoietic cell lineage

214449_s_at -0.329 9.179 -2.183 4.508e-02 0.543 -3.954 RHOQ ras homolog gene family, member Q 2 46623370 NM_012249 2p21 Hs.709193 27

nucleotide binding

GTPase activity

profilin binding

GTP binding

intracellular

cytoplasm

actin filament

plasma membrane

GTP catabolic process

small GTPase mediated signal transduction

insulin receptor signaling pathway

regulation of cell shape

positive regulation of specific transcription from RNA polymerase II promoter

cortical actin cytoskeleton organization

GBD domain binding

regulation of actin cytoskeleton organization

membrane raft

positive regulation of glucose import

positive regulation of filopodium assembly

regulation of establishment of protein localization

Insulin signaling pathway

221467_at 0.167 4.486 2.183 4.508e-02 0.543 -3.954 MC4R melanocortin 4 receptor 18 -56189543 NM_005912 18q22 Hs.532833 147

receptor activity

G-protein coupled receptor activity

melanocortin receptor activity

protein binding

cytoplasm

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

G-protein signaling, coupled to cAMP nucleotide second messenger

feeding behavior

integral to membrane

regulation of metabolic process

insulin secretion

response to insulin stimulus

positive regulation of bone resorption

Neuroactive ligand-receptor interaction

48531_at -0.307 7.471 -2.183 4.510e-02 0.543 -3.954 TNIP2 TNFAIP3 interacting protein 2 4 -2713184, -2713184 AA522816 4p16.3 Hs.719161 20

protein binding

cytoplasm

I-kappaB kinase/NF-kappaB cascade

 
209510_at -0.276 8.058 -2.183 4.510e-02 0.543 -3.954 RNF139 ring finger protein 139 8 125556188 AF064801 8q24 Hs.492751 10

receptor activity

protein binding

endoplasmic reticulum

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

regulation of protein ubiquitination

metal ion binding

 
225480_at -0.187 8.439 -2.183 4.511e-02 0.543 -3.954 C1orf122 chromosome 1 open reading frame 122 1 38046059 BE408081 1p34.3 Hs.532749 4    
225912_at 0.403 6.663 2.183 4.512e-02 0.543 -3.954 TP53INP1 tumor protein p53 inducible nuclear protein 1 8 -96007376 AW341649 8q22 Hs.492261 16

nucleus

apoptosis

 
211274_at -0.198 4.260 -2.183 4.512e-02 0.543 -3.954 TBX1 T-box 1 22 18124225, 18124225, 18124225 AF012130 22q11.21 Hs.173984 21

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

heart development

anatomical structure morphogenesis

protein homodimerization activity

sequence-specific DNA binding

thymus development

embryonic viscerocranium morphogenesis

parathyroid gland development

soft palate development

pharyngeal system development

 
219990_at 0.853 6.845 2.183 4.513e-02 0.543 -3.955 E2F8 E2F transcription factor 8 11 -19202185 NM_024680 11p15.1 Hs.523526 8

transcription factor activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

cell cycle

 
237981_at -0.559 9.606 -2.182 4.516e-02 0.543 -3.955 CMYA5 cardiomyopathy associated 5 5 79021414 AA195941 5q14.1 Hs.482625 7

cytoplasm

identical protein binding

perinuclear region of cytoplasm

 
243614_s_at -0.211 4.575 -2.182 4.521e-02 0.543 -3.956 PRODH2 proline dehydrogenase (oxidase) 2 19 -40982731 AW138125 19q13.1 Hs.515366 2

proline dehydrogenase activity

mitochondrial inner membrane

glutamate biosynthetic process

proline catabolic process

oxidoreductase activity

oxidation reduction

Arginine and proline metabolism

Metabolic pathways

205758_at 0.237 4.613 2.182 4.521e-02 0.543 -3.956 CD8A CD8a molecule 2 -86865239, -86865239 AW006735 2p12 Hs.85258 72

protein binding

extracellular region

plasma membrane

integral to plasma membrane

immune response

transmembrane receptor protein tyrosine kinase signaling pathway

coreceptor activity

antigen processing and presentation

T cell receptor complex

T cell activation

MHC class I protein binding

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Hematopoietic cell lineage

T cell receptor signaling pathway

Primary immunodeficiency

210010_s_at 0.242 6.004 2.182 4.522e-02 0.543 -3.956 SLC25A1 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1 22 -17543094 U25147 22q11.21 Hs.719167 11

transporter activity

protein binding

mitochondrion

mitochondrial inner membrane

transport

mitochondrial citrate transport

citrate transmembrane transporter activity

membrane

integral to membrane

 
218501_at 0.293 6.685 2.181 4.527e-02 0.544 -3.957 ARHGEF3 Rho guanine nucleotide exchange factor (GEF) 3 3 -56736485, -56736485, -56736485 NM_019555 3p21-p13 Hs.476402 15

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

intracellular

cytoplasm

intracellular signaling cascade

regulation of Rho protein signal transduction

 
231742_at 0.219 4.236 2.181 4.527e-02 0.544 -3.957 CRX cone-rod homeobox 19 53016910 NM_000554 19q13.3 Hs.617342 Hs.633434 Hs.639114 31

chromatin binding

transcription factor activity

protein binding

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

visual perception

circadian rhythm

organ morphogenesis

transcription activator activity

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

positive regulation of photoreceptor cell differentiation

response to stimulus

 
220120_s_at 0.243 2.656 2.180 4.535e-02 0.544 -3.959 EPB41L4A erythrocyte membrane protein band 4.1 like 4A 5 -111526213 NM_022140 5q22.1-q22.2 Hs.584954 7

binding

cellular_component

cytoplasm

cytoskeleton

cytoskeletal protein binding

biological_process

extrinsic to membrane

 
239051_at 0.211 4.112 2.180 4.536e-02 0.544 -3.959 FLJ31813 hypothetical protein FLJ31813 10   BF508908 10q11.22 Hs.712902 1    
208822_s_at 0.224 8.909 2.180 4.537e-02 0.544 -3.959 DAP3 death associated protein 3 1 153925497, 153925497 U18321 1q21-q22 Hs.516746 26

protein binding

mitochondrion

mitochondrial ribosome

ribosome

induction of apoptosis by extracellular signals

apoptotic mitochondrial changes

small ribosomal subunit

 
204049_s_at 0.320 7.411 2.180 4.538e-02 0.544 -3.959 PHACTR2 phosphatase and actin regulator 2 6 143971009, 144040794 NM_014721 6q24.2 Hs.102471 8

actin binding

phosphoprotein phosphatase inhibitor activity

protein binding

 
209121_x_at 0.238 7.887 2.180 4.538e-02 0.544 -3.959 NR2F2 nuclear receptor subfamily 2, group F, member 2 15 94670160, 94675114, 94676797, 94677572 M64497 15q26 Hs.657455 27

transcription factor activity

ligand-regulated transcription factor activity

steroid hormone receptor activity

transcription corepressor activity

nucleus

regulation of transcription from RNA polymerase II promoter

lipid metabolic process

signal transduction

zinc ion binding

sequence-specific DNA binding

metal ion binding

 
226682_at -0.428 8.536 -2.180 4.539e-02 0.544 -3.960 RORA RAR-related orphan receptor A 15 -58567776, -58567776, -58567776 AW006185 15q22.2 Hs.560343 Hs.655155 33

transcription factor activity

steroid hormone receptor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

nitric oxide biosynthetic process

signal transduction

zinc ion binding

cerebellar Purkinje cell differentiation

regulation of macrophage activation

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

cGMP metabolic process

metal ion binding

 
217943_s_at -0.364 8.997 -2.179 4.544e-02 0.544 -3.961 MAP7D1 MAP7 domain containing 1 1 36394389 NM_018067 1p34.3 Hs.700595 7

spindle

 
242441_at -0.313 5.294 -2.179 4.546e-02 0.544 -3.961 LOC646548 similar to ADAM metallopeptidase domain 21 preproprotein 14   AA608973 14q24.2        
1564166_s_at 0.254 4.847 2.179 4.549e-02 0.544 -3.961 PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 7 101823808 AK098276 7q22.1 Hs.406395 6

double-stranded RNA binding

protein kinase inhibitor activity

protein binding

nucleus

nucleolus

negative regulation of protein kinase activity

protein kinase binding

negative regulation of phosphorylation

 
205628_at -0.200 3.465 -2.179 4.549e-02 0.544 -3.962 PRIM2 primase, DNA, polypeptide 2 (58kDa) 6 57290380 NM_000947 6p12-p11.1 Hs.654580 16

DNA binding

DNA primase activity

iron ion binding

nucleoplasm

alpha DNA polymerase:primase complex

DNA replication

DNA replication, synthesis of RNA primer

transcription

transferase activity

nucleotidyltransferase activity

metal ion binding

4 iron, 4 sulfur cluster binding

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

DNA replication

211778_s_at -0.252 4.053 -2.178 4.550e-02 0.544 -3.962 OVOL2 ovo-like 2 (Drosophila) 20 -17952795 BC006148 20pter-q11.23 Hs.661013 Hs.710157 5

neural crest cell migration

neural fold formation

DNA binding

intracellular

nucleus

heart development

zinc ion binding

negative regulation of cell proliferation

dorsal/ventral pattern formation

regulation of transcription

negative regulation of transcription, DNA-dependent

positive regulation of transcription, DNA-dependent

metal ion binding

embryonic gut morphogenesis

 
235085_at 0.296 8.123 2.178 4.551e-02 0.544 -3.962 PRAGMIN homolog of rat pragma of Rnd2 8 -8212667 BF739767 8p23.1 Hs.657673 4

nucleotide binding

non-membrane spanning protein tyrosine kinase activity

ATP binding

protein amino acid phosphorylation

transferase activity

 
208382_s_at 0.254 5.108 2.178 4.551e-02 0.544 -3.962 DMC1 DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast) 22 -37244899 D63882 22q13.1 Hs.339396 24

nucleotide binding

pachytene

condensed nuclear chromosome

ovarian follicle development

oocyte maturation

DNA binding

protein binding

ATP binding

intracellular

nucleus

cytoplasm

DNA metabolic process

cell cycle

meiosis

reciprocal meiotic recombination

male meiosis I

spermatogenesis

spermatid development

female gamete generation

DNA-dependent ATPase activity

nucleoside-triphosphatase activity

 
232986_at 0.239 3.869 2.178 4.554e-02 0.544 -3.962 ZNF233 zinc finger protein 233 19 49455915 AC074331 19q13.31 Hs.466891 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
207818_s_at 0.196 3.446 2.178 4.557e-02 0.544 -3.963 HTR7 5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled) 10 -92490557 NM_000872 10q21-q24 Hs.73739 35

receptor activity

G-protein coupled receptor activity

serotonin receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein signaling, coupled to cyclic nucleotide second messenger

synaptic transmission

circadian rhythm

blood circulation

Calcium signaling pathway

Neuroactive ligand-receptor interaction

244431_at 0.251 4.779 2.177 4.559e-02 0.544 -3.963 KILLIN killin protein 10 -89608897 AA057423 10q23 Hs.559820 2

DNA binding

nucleus

apoptosis

cell cycle

 
208386_x_at 0.160 3.279 2.177 4.561e-02 0.545 -3.964 DMC1 DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast) 22 -37244899 NM_007068 22q13.1 Hs.339396 24

nucleotide binding

pachytene

condensed nuclear chromosome

ovarian follicle development

oocyte maturation

DNA binding

protein binding

ATP binding

intracellular

nucleus

cytoplasm

DNA metabolic process

cell cycle

meiosis

reciprocal meiotic recombination

male meiosis I

spermatogenesis

spermatid development

female gamete generation

DNA-dependent ATPase activity

nucleoside-triphosphatase activity

 
231666_at -0.454 5.277 -2.177 4.564e-02 0.545 -3.964 PAX3 paired box 3 2 -222866592, -222774675, -222772850 AA194168 2q35 2q35-q37 Hs.42146 103

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

apoptosis

multicellular organismal development

sensory perception of sound

organ morphogenesis

sequence-specific DNA binding

 
219658_at 0.162 5.025 2.177 4.565e-02 0.545 -3.964 PTCD2 pentatricopeptide repeat domain 2 5 71651955 NM_024754 5q13.2 Hs.126906 3

kidney development

liver development

mitochondrion organization

heart development

muscle fiber development

regulation of mRNA processing

ventricular cardiac muscle morphogenesis

 
227087_at 0.301 6.974 2.177 4.566e-02 0.545 -3.965 INPP4A inositol polyphosphate-4-phosphatase, type I, 107kDa 2 98427752, 98427752 AA126419 2q11.2 Hs.469386 16

signal transduction

phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity

hydrolase activity

phosphatidyl-inositol-4,5-bisphosphate 4-phosphatase activity

Inositol phosphate metabolism

Metabolic pathways

Phosphatidylinositol signaling system

1557067_s_at -0.293 6.063 -2.176 4.571e-02 0.545 -3.966 LUC7L LUC7-like (S. cerevisiae) 16 -178974, -178970 AI744735 16p13.3 Hs.16803 11

protein binding

nucleus

zinc ion binding

negative regulation of striated muscle development

metal ion binding

RS domain binding

 
223331_s_at -0.207 6.417 -2.176 4.573e-02 0.545 -3.966 DDX20 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 1 112099776 AF106019 1p21.1-p13.2 Hs.591405 30

negative regulation of transcription from RNA polymerase II promoter

nucleotide binding

assembly of spliceosomal tri-snRNP

DNA binding

ATP-dependent RNA helicase activity

helicase activity

protein binding

ATP binding

nucleus

nucleoplasm

spliceosomal complex

cytoplasm

cytosol

cytoskeleton

mRNA processing

induction of apoptosis

RNA splicing

Cajal body

transcription repressor activity

hydrolase activity

transcriptional repressor complex

 
225222_at -0.307 6.958 -2.175 4.576e-02 0.545 -3.967 HIAT1 hippocampus abundant transcript 1 1 100276376 AI243268 1p21.2 Hs.124156 5

transporter activity

transport

tetracycline:hydrogen antiporter activity

tetracycline transport

membrane

integral to membrane

response to antibiotic

 
211269_s_at 0.288 3.634 2.175 4.577e-02 0.545 -3.967 IL2RA interleukin 2 receptor, alpha 10 -6093511 K03122 10p15-p14 Hs.231367 189

receptor activity

interleukin-2 receptor activity

plasma membrane

apoptosis

immune response

cell surface receptor linked signal transduction

cell proliferation

integral to membrane

Cytokine-cytokine receptor interaction

Endocytosis

Jak-STAT signaling pathway

Hematopoietic cell lineage

232001_at -0.457 8.457 -2.175 4.580e-02 0.545 -3.967 LOC439949 hypothetical protein LOC439949 10   AW193600 10p14 Hs.590987 2    
1552860_at -0.241 3.677 -2.175 4.584e-02 0.546 -3.968 TCEB3C transcription elongation factor B polypeptide 3C (elongin A3) 18 -42808570, -42802655 NM_145653 18q21.1 Hs.515381 Hs.631674 4

DNA binding

protein binding

nucleus

integral to membrane

transcription regulator activity

regulation of transcription

 
222777_s_at 0.199 4.541 2.174 4.586e-02 0.546 -3.968 WHSC1 Wolf-Hirschhorn syndrome candidate 1 4 1842920, 1864306, 1864306, 1864306, 1872150 AI770166 4p16.3 Hs.113876 32

DNA binding

protein binding

nucleus

cytoplasm

methyltransferase activity

zinc ion binding

anatomical structure morphogenesis

chromatin modification

transferase activity

histone-lysine N-methyltransferase activity

regulation of transcription

metal ion binding

Lysine degradation

1553281_at 0.142 5.130 2.174 4.586e-02 0.546 -3.968 PLCXD2 phosphatidylinositol-specific phospholipase C, X domain containing 2 3 112876196, 112876196 NM_153268 3q13.2 Hs.655022 2

phospholipase C activity

signal transducer activity

intracellular signaling cascade

lipid catabolic process

hydrolase activity

 
216320_x_at 0.200 6.099 2.174 4.587e-02 0.546 -3.969 MST1 macrophage stimulating 1 (hepatocyte growth factor-like) 3 -49696384 U37055 3p21 Hs.349110 Hs.512587 31

catalytic activity

serine-type endopeptidase activity

calcium ion binding

extracellular region

proteolysis

blood coagulation

biological_process

 
224853_at 0.344 6.048 2.174 4.589e-02 0.546 -3.969 SLAIN2 SLAIN motif family, member 2 4 48038369 AI979301 4p11 Hs.479677 5    
203442_x_at 0.233 5.518 2.174 4.590e-02 0.546 -3.969 EML3 echinoderm microtubule associated protein like 3 11 -62126266 AA478965 11q12.3 Hs.379785 8

protein binding

cytoplasm

microtubule

 
1559890_a_at -0.164 2.110 -2.174 4.591e-02 0.546 -3.969 ABI1 abl-interactor 1 10 -27075530 BF194851 10p11.2 Hs.508148 39

intracellular

soluble fraction

nucleus

cytoplasm

endoplasmic reticulum

cytosol

cytoskeleton

transmembrane receptor protein tyrosine kinase signaling pathway

cytoskeletal protein binding

negative regulation of cell proliferation

peptidyl-tyrosine phosphorylation

synaptosome

lamellipodium

cell junction

filopodium

growth cone

synapse

 
244871_s_at -0.222 5.364 -2.173 4.597e-02 0.546 -3.970 USP32 ubiquitin specific peptidase 32 17 -55609472 AW268357 17q23.1-q23.2 Hs.132868 6

ubiquitin thiolesterase activity

calcium ion binding

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

membrane

 
223449_at 0.309 6.406 2.173 4.597e-02 0.546 -3.971 SEMA6A sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 5 -115807149 AF225425 5q23.1 Hs.156967 11

receptor activity

protein binding

apoptosis

cytoskeleton organization

cell surface receptor linked signal transduction

multicellular organismal development

nervous system development

axon guidance

organ morphogenesis

membrane

integral to membrane

cell differentiation

axon

Axon guidance

224046_s_at -0.847 5.283 -2.172 4.603e-02 0.547 -3.972 PDE7A phosphodiesterase 7A 8 -66796607, -66792459 U67932 8q13 Hs.527119 16

cell fraction

3',5'-cyclic-AMP phosphodiesterase activity

signal transduction

hydrolase activity

Purine metabolism

226455_at -0.275 5.550 -2.172 4.604e-02 0.547 -3.972 CREB3L4 cAMP responsive element binding protein 3-like 4 1 152207020 AL563283 1q21.3 Hs.372924 6

transcription factor activity

nucleus

endoplasmic reticulum

Golgi apparatus

regulation of transcription, DNA-dependent

response to unfolded protein

membrane

integral to membrane

sequence-specific DNA binding

protein dimerization activity

Melanogenesis

Huntington's disease

Prostate cancer

202364_at -0.545 8.747 -2.171 4.612e-02 0.547 -3.973 MXI1 MAX interactor 1 10 111957352, 111959978, 111975751 NM_005962 10q24-q25 Hs.602078 Hs.719185 37

DNA binding

transcription corepressor activity

nucleus

negative regulation of cell proliferation

transcription regulator activity

cytoplasmic sequestering of transcription factor

regulation of transcription

 
1555118_at 0.166 2.655 2.170 4.622e-02 0.548 -3.975 ENTPD3 ectonucleoside triphosphate diphosphohydrolase 3 3 40403676 BC029869 3p21.3 Hs.441145 9

nucleotide binding

magnesium ion binding

calcium ion binding

ATP binding

plasma membrane

nucleoside diphosphate catabolic process

nucleoside triphosphate catabolic process

integral to membrane

hydrolase activity

nucleoside-diphosphatase activity

nucleoside-triphosphatase activity

Purine metabolism

Pyrimidine metabolism

227017_at 0.263 5.292 2.170 4.622e-02 0.548 -3.975 ERICH1 glutamate-rich 1 8 -604199 BE644894 8p23.3 Hs.655310 4    
203922_s_at -0.189 3.906 -2.170 4.623e-02 0.548 -3.975 CYBB cytochrome b-245, beta polypeptide X 37524213 AI308863 Xp21.1 Hs.292356 96

voltage-gated ion channel activity

protein binding

cytoplasm

mitochondrion

plasma membrane

ion transport

inflammatory response

electron carrier activity

superoxide-generating NADPH oxidase activity

superoxide-generating NADPH oxidase activity

oxidoreductase activity

heme binding

electron transport chain

superoxide anion generation

superoxide anion generation

NADPH oxidase complex

NADPH oxidase complex

innate immune response

innate immune response

respiratory burst

respiratory burst

metal ion binding

protein heterodimerization activity

FAD binding

Leukocyte transendothelial migration

217724_at -0.207 11.090 -2.170 4.624e-02 0.548 -3.975 SERBP1 SERPINE1 mRNA binding protein 1 1 -67646080 AF131807 1p31 Hs.719078 22

RNA binding

mRNA 3'-UTR binding

protein binding

nucleus

cytoplasm

regulation of mRNA stability

perinuclear region of cytoplasm

 
233937_at 0.273 2.913 2.170 4.626e-02 0.548 -3.976 GGNBP2 gametogenetin binding protein 2 17 31974916 AK024883 17q12 Hs.514116 4

multicellular organismal development

spermatogenesis

cell differentiation

cytoplasmic vesicle

 
AFFX-HSAC07/X00351_M_at -0.306 10.261 -2.170 4.626e-02 0.548 -3.976 ACTB actin, beta 7 -5533304 AFFX-HSAC07/X00351_M 7p15-p12 Hs.520640 Hs.708120 206

nucleotide binding

structural constituent of cytoskeleton

protein binding

ATP binding

soluble fraction

cytoplasm

cytosol

cell motion

cortical cytoskeleton

NuA4 histone acetyltransferase complex

nitric-oxide synthase binding

MLL5-L complex

Focal adhesion

Adherens junction

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Vibrio cholerae infection

Pathogenic Escherichia coli infection - EHEC

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

1560277_a_at 0.171 5.159 2.170 4.628e-02 0.548 -3.976 LOC283403 hypothetical protein LOC283403 12   BC038743 12q13.13 Hs.667179 1    
234676_s_at -0.181 3.348 -2.169 4.629e-02 0.548 -3.976 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 (putative) 21 -29166383 AK021678 21q21.3 Hs.163846 6

nucleic acid binding

protein binding

protein methyltransferase activity

transferase activity

positive regulation of cell growth

methylation

protein complex

 
229394_s_at -0.338 8.971 -2.169 4.629e-02 0.548 -3.976 GRLF1 glucocorticoid receptor DNA binding factor 1 19 52113772 AI275597 19q13.3 Hs.509447 26

DNA binding

transcription corepressor activity

GTPase activator activity

intracellular

nucleus

cytoplasm

signal transduction

negative regulation of transcription

Focal adhesion

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

218379_at -0.268 7.350 -2.169 4.632e-02 0.548 -3.977 RBM7 RNA binding motif protein 7 11 113776593 NM_016090 11q23.1-q23.2 Hs.7527 10

nucleotide binding

RNA binding

protein binding

meiosis

 
228992_at -0.390 7.023 -2.169 4.632e-02 0.548 -3.977 MED28 mediator complex subunit 28 4 17225370 BF064162 4p16 Hs.434075 Hs.644788 14

actin binding

protein binding

nucleus

cytoplasm

membrane

regulation of transcription

 
231669_at -0.309 5.206 -2.169 4.632e-02 0.548 -3.977 SEPP1 selenoprotein P, plasma, 1 5 -42835738 AV653290 5q31 Hs.275775 Hs.718521 34

selenium metabolic process

extracellular region

extracellular space

response to oxidative stress

brain development

locomotory behavior

selenium binding

post-embryonic development

sexual reproduction

growth

 
204989_s_at -0.216 5.096 -2.169 4.635e-02 0.548 -3.977 ITGB4 integrin, beta 4 17 71229110, 71232370 BF305661 17q25 Hs.632226 120

receptor activity

protein binding

cell communication

cell adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

integrin complex

membrane

integral to membrane

Focal adhesion

ECM-receptor interaction

Regulation of actin cytoskeleton

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

230132_at 0.178 5.429 2.169 4.636e-02 0.548 -3.978 ATP5SL ATP5S-like 19 -46629063 AA147817 19q13.2 Hs.351099 2    
212038_s_at -0.355 11.646 -2.169 4.637e-02 0.548 -3.978 VDAC1 voltage-dependent anion channel 1 5 -133335505 AL515918 5q31 Hs.519320 Hs.709372 73

behavioral fear response

protein binding

mitochondrion

mitochondrial outer membrane

mitochondrial inner membrane

plasma membrane

anion transport

apoptosis

nerve-nerve synaptic transmission

learning

voltage-gated anion channel activity

voltage-gated anion channel activity

mitochondrial nucleoid

interspecies interaction between organisms

pore complex

Calcium signaling pathway

Parkinson's disease

Huntington's disease

217908_s_at -0.283 11.028 -2.168 4.638e-02 0.548 -3.978 DCAF6 DDB1 and CUL4 associated factor 6 1 166172531 NM_018442 1q24.2 Hs.435741 10

nucleus

ligand-dependent nuclear receptor transcription coactivator activity

 
217761_at 0.458 9.268 2.168 4.640e-02 0.548 -3.978 ADI1 acireductone dioxygenase 1 2 -3480696 NM_018269 2p25.3 Hs.502773 13

protein binding

nucleus

cytoplasm

plasma membrane

cellular amino acid biosynthetic process

methionine biosynthetic process

nickel ion binding

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

methionine salvage

metal ion binding

oxidation reduction

Cysteine and methionine metabolism

Metabolic pathways

1557822_at -0.186 1.878 -2.168 4.642e-02 0.548 -3.979 LOC401134 hypothetical gene supported by BC040544 4   BC040544 4q13.1 Hs.165899 1    
1569408_at -0.213 2.758 -2.168 4.642e-02 0.548 -3.979 EIF2C4 eukaryotic translation initiation factor 2C, 4 1 36046414 BC016012 1p34.3 Hs.471492 8

cytoplasmic mRNA processing body

RNA binding

protein binding

cytoplasm

mRNA catabolic process

regulation of translation

gene silencing by RNA

gene silencing by miRNA, negative regulation of translation

 
212910_at -0.323 7.578 -2.168 4.643e-02 0.548 -3.979 THAP11 THAP domain containing 11 16 66433713 W19873 16q22.1 Hs.632200 7

DNA binding

nucleus

cytoplasm

zinc ion binding

identical protein binding

regulation of transcription

metal ion binding

 
214468_at 0.821 8.940 2.168 4.643e-02 0.548 -3.979 MYH6 myosin, heavy chain 6, cardiac muscle, alpha 14 -22921038 D00943 14q12 Hs.278432 23

microfilament motor activity

nucleotide binding

in utero embryonic development

regulation of the force of heart contraction

regulation of heart rate

actin binding

calmodulin binding

ATP binding

nucleus

nucleolus

cytoplasm

striated muscle thick filament

focal adhesion

striated muscle contraction

adult heart development

visceral muscle development

regulation of blood pressure

structural constituent of muscle

myosin complex

ATPase activity

actin filament-based movement

muscle filament sliding

actin-dependent ATPase activity

regulation of ATPase activity

sarcomere organization

cardiac muscle fiber development

atrial cardiac muscle morphogenesis

ventricular cardiac muscle morphogenesis

Cardiac muscle contraction

Tight junction

Hypertrophic cardiomyopathy (HCM)

239002_at -0.177 3.569 -2.168 4.645e-02 0.548 -3.979 ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 1 -195319879 AA748494 1q31 Hs.121028 35

calmodulin binding

nucleus

cytoplasm

cell cycle

mitosis

cell division

 
1563090_at 0.214 6.567 2.167 4.650e-02 0.548 -3.980 CCDC33 coiled-coil domain containing 33 15 72315719, 72397952 BC009178 15q24.1 Hs.383206 Hs.621342 7

protein binding

 
1553560_at 0.183 3.436 2.167 4.653e-02 0.548 -3.981 VN1R4 vomeronasal 1 receptor 4 19 -58461824 NM_173857 19q13.42 Hs.553685 5

receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

integral to membrane

pheromone receptor activity

response to pheromone

 
218718_at 0.430 7.030 2.166 4.655e-02 0.548 -3.981 PDGFC platelet derived growth factor C 4 -157902213 NM_016205 4q32 Hs.570855 22

platelet-derived growth factor receptor binding

extracellular region

extracellular space

nucleus

cytoplasm

activation of transmembrane receptor protein tyrosine kinase activity

central nervous system development

growth factor activity

organ morphogenesis

membrane

protein homodimerization activity

cell surface binding

positive regulation of DNA replication

platelet-derived growth factor receptor signaling pathway

positive regulation of fibroblast proliferation

regulation of peptidyl-tyrosine phosphorylation

Cytokine-cytokine receptor interaction

Focal adhesion

Gap junction

Regulation of actin cytoskeleton

Prostate cancer

Melanoma

228051_at 0.275 5.272 2.166 4.657e-02 0.548 -3.982 LOC202451 hypothetical protein LOC202451 6   AI979261 6q23.3 Hs.194408 1    
218756_s_at 0.401 6.561 2.166 4.657e-02 0.548 -3.982 DHRS11 dehydrogenase/reductase (SDR family) member 11 17 32022338 NM_024308 17q12 Hs.462859 5

binding

extracellular region

oxidoreductase activity

oxidation reduction

 
232842_at -0.208 3.868 -2.166 4.657e-02 0.548 -3.982 DOCK8 dedicator of cytokinesis 8 9 204864 AL161725 9p24.3 Hs.132599 11

guanyl-nucleotide exchange factor activity

GTP binding

GTPase binding

 
218124_at 0.363 7.112 2.166 4.658e-02 0.548 -3.982 RETSAT retinol saturase (all-trans-retinol 13,14-reductase) 2 -85422589 NM_017750 2p11.2 Hs.440401 11

nuclear outer membrane

endoplasmic reticulum

endoplasmic reticulum membrane

electron carrier activity

membrane

oxidoreductase activity

retinol metabolic process

all-trans-retinol 13,14-reductase activity

oxidation reduction

Retinol metabolism

225004_at -0.228 6.971 -2.166 4.659e-02 0.548 -3.982 TMEM101 transmembrane protein 101 17 -39444081 AL525613 17q21.31 Hs.514211 3

signal transducer activity

cellular_component

membrane

integral to membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

 
205425_at 0.357 3.378 2.166 4.659e-02 0.548 -3.982 HIP1 huntingtin interacting protein 1 7 -75001344 NM_005338 7q11.23 Hs.329266 Hs.619089 31

actin binding

structural constituent of cytoskeleton

membrane fraction

nucleus

cytoplasm

Golgi apparatus

cytoskeleton

endocytosis

induction of apoptosis

activation of caspase activity

cell death

membrane

cell differentiation

clathrin binding

clathrin coated vesicle membrane

cytoplasmic vesicle

phosphoinositide binding

regulation of apoptosis

regulation of transcription

positive regulation of receptor-mediated endocytosis

clathrin coat assembly

Huntington's disease

225864_at 0.404 5.364 2.166 4.659e-02 0.548 -3.982 FAM84B family with sequence similarity 84, member B 8 -127633868 AL039862 8q24.21 Hs.124951 5

protein binding

cytoplasm

plasma membrane

 
204744_s_at 0.375 9.932 2.166 4.663e-02 0.548 -3.983 IARS isoleucyl-tRNA synthetase 9 -94012445, -94012445 NM_013417 9q21 Hs.445403 13

nucleotide binding

isoleucine-tRNA ligase activity

ATP binding

soluble fraction

cytoplasm

isoleucyl-tRNA aminoacylation

zinc ion binding

ligase activity

Valine, leucine and isoleucine biosynthesis

Aminoacyl-tRNA biosynthesis

238125_at 0.249 4.682 2.166 4.663e-02 0.548 -3.983 ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif, 16 5 5193442 AI740544 5p15 Hs.661915 4

metalloendopeptidase activity

extracellular region

proteinaceous extracellular matrix

proteolysis

peptidase activity

zinc ion binding

metal ion binding

 
229256_at -0.562 7.385 -2.165 4.664e-02 0.548 -3.983 PGM2L1 phosphoglucomutase 2-like 1 11 -73719008 AV724329 11q13.4 Hs.26612 6

carbohydrate metabolic process

glucose metabolic process

transferase activity

isomerase activity

intramolecular transferase activity, phosphotransferases

glucose-1,6-bisphosphate synthase activity

Starch and sucrose metabolism

240365_at -0.176 2.922 -2.165 4.672e-02 0.549 -3.984 LOC647946 hypothetical protein LOC647946 18 -35040885 AI799052 18q12.2-q12.3 Hs.649350 4    
226084_at 0.354 5.443 2.164 4.673e-02 0.549 -3.984 MAP1B microtubule-associated protein 1B 5 71438873 AA554833 5q13 Hs.335079 34

microtubule bundle formation

actin binding

structural molecule activity

protein binding

cytosol

microtubule

microtubule associated complex

negative regulation of microtubule depolymerization

dendrite development

 
232611_at -0.221 4.137 -2.164 4.675e-02 0.549 -3.985 GOLGA2L1 golgi autoantigen, golgin subfamily a, 2-like 1 12 -99081164, -99074323 AL137680 12q23.1 Hs.524660 Hs.645240 3    
224333_s_at 0.272 8.570 2.164 4.680e-02 0.549 -3.986 MRPS5 mitochondrial ribosomal protein S5 2 -95116678 AB049940 2p11.2-q11.2 Hs.655259 9

RNA binding

structural constituent of ribosome

protein binding

intracellular

mitochondrion

ribosome

translation

 
215440_s_at 0.622 4.638 2.164 4.681e-02 0.549 -3.986 BEX4 brain expressed, X-linked 4 X 102356675, 102356675 AL523320 Xq22.1-q22.3 Hs.184736 4

nucleus

cytoplasm

 
225509_at -0.314 7.304 -2.163 4.685e-02 0.550 -3.987 SAP30L SAP30-like 5 153805709 AI862477 5q33.2 Hs.592566 8

nucleus

nucleolus

regulation of transcription

 
1562219_at 0.217 5.168 2.163 4.687e-02 0.550 -3.987 FLJ41649 hypothetical LOC401260 6   BC040854 6p21.2 Hs.654837 1    
220637_at 0.219 3.950 2.162 4.692e-02 0.550 -3.988 FAM124B family with sequence similarity 124B 2 -224951658 NM_024785 2q36.2 Hs.147585 3

protein binding

 
206326_at -0.202 3.189 -2.162 4.698e-02 0.551 -3.989 GRP gastrin-releasing peptide 18 55038379 NM_002091 18q21.1-q21.32 Hs.153444 37

receptor binding

neuropeptide hormone activity

extracellular region

extracellular space

signal transduction

neuropeptide signaling pathway

 
221493_at -0.288 10.576 -2.162 4.699e-02 0.551 -3.989 TSPYL1 TSPY-like 1 6 -116704438 AL136629 6q22-q23 Hs.458358 Hs.486292 11

molecular_function

cellular_component

intracellular

nucleus

nucleolus

nucleosome assembly

biological_process

 
1553069_at 0.190 3.374 2.162 4.699e-02 0.551 -3.989 C21orf87 chromosome 21 open reading frame 87 21   NM_153455 21q22.2 Hs.190548 2    
1552637_at 0.252 2.990 2.161 4.704e-02 0.551 -3.990 PTPN11 protein tyrosine phosphatase, non-receptor type 11 12 111340918 NM_080601 12q24 Hs.506852 Hs.646231 326

non-membrane spanning protein tyrosine phosphatase activity

non-membrane spanning protein tyrosine phosphatase activity

protein binding

cytoplasm

cytosol

protein amino acid dephosphorylation

signal transduction

hydrolase activity

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Adipocytokine signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

Renal cell carcinoma

Chronic myeloid leukemia

201516_at 0.289 8.265 2.161 4.706e-02 0.551 -3.991 SRM spermidine synthase 1 -11037235 NM_003132 1p36-p22 Hs.76244 12

spermidine synthase activity

spermidine biosynthetic process

transferase activity

Cysteine and methionine metabolism

Arginine and proline metabolism

beta-Alanine metabolism

Glutathione metabolism

Metabolic pathways

218125_s_at -0.296 6.953 -2.160 4.710e-02 0.551 -3.991 CCDC25 coiled-coil domain containing 25 8 -27646751 NM_018246 8p21.1 Hs.445512 6    
205729_at -0.227 3.109 -2.160 4.711e-02 0.551 -3.991 OSMR oncostatin M receptor 5 38881892 NM_003999 5p13.1 Hs.120658 21

positive regulation of acute inflammatory response

receptor activity

oncostatin-M receptor activity

oncostatin-M receptor complex

cell surface receptor linked signal transduction

positive regulation of cell proliferation

membrane

integral to membrane

growth factor binding

response to cytokine stimulus

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

213911_s_at -0.311 9.588 -2.160 4.712e-02 0.551 -3.992 H2AFZ H2A histone family, member Z 4 -101088266 BF718636 4q24 Hs.119192 37

nucleosome

DNA binding

nucleus

chromosome

nucleosome assembly

Systemic lupus erythematosus

220385_at -0.226 5.712 -2.160 4.713e-02 0.551 -3.992 JPH2 junctophilin 2 20 -42238870, -42173750 NM_020433 20q13.12 Hs.441737 11

protein binding

membrane fraction

microsome

plasma membrane

junctional sarcoplasmic reticulum membrane

integral to membrane

sarcoplasmic reticulum

Z disc

regulation of ryanodine-sensitive calcium-release channel activity

calcium ion transport into cytosol

 
212096_s_at -0.224 10.073 -2.160 4.714e-02 0.551 -3.992 MTUS1 mitochondrial tumor suppressor 1 8 -17545583, -17545583, -17545583 AL096842 8p22 Hs.7946 11

nucleus

mitochondrion

Golgi apparatus

plasma membrane

 
1566191_at 0.197 4.870 2.160 4.715e-02 0.551 -3.992 SUZ12 suppressor of zeste 12 homolog (Drosophila) 17 27288156 AI907884 17q11.2 Hs.462732 31

intracellular

nucleus

zinc ion binding

chromatin modification

ESC/E(Z) complex

histone methyltransferase activity

regulation of transcription

metal ion binding

 
209323_at -0.269 8.357 -2.160 4.715e-02 0.551 -3.992 PRKRIR protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) 11 -75738651 AF081567 11q13.5 Hs.503315 12

DNA binding

nucleus

nucleolus

response to stress

signal transduction

zinc ion binding

negative regulation of cell proliferation

metal ion binding

protein dimerization activity

 
212468_at -0.368 6.974 -2.160 4.717e-02 0.551 -3.992 SPAG9 sperm associated antigen 9 17 -46394534 AK023512 17q21.33 Hs.463439 22

acrosomal vesicle

protein binding

cytoplasm

spermatogenesis

integral to membrane

positive regulation of cell migration

perinuclear region of cytoplasm

 
217827_s_at -0.469 8.679 -2.159 4.718e-02 0.551 -3.993 SPG21 spastic paraplegia 21 (autosomal recessive, Mast syndrome) 15 -63042415, -63042415 NM_016630 15q21-q22 Hs.242458 10

cytoplasm

endosome

Golgi apparatus

cytosol

cytosol

cell death

membrane

trans-Golgi network transport vesicle

trans-Golgi network transport vesicle

CD4 receptor binding

CD4 receptor binding

antigen receptor-mediated signaling pathway

 
212610_at -0.302 10.103 -2.159 4.719e-02 0.551 -3.993 PTPN11 protein tyrosine phosphatase, non-receptor type 11 12 111340918 U79291 12q24 Hs.506852 Hs.646231 326

non-membrane spanning protein tyrosine phosphatase activity

non-membrane spanning protein tyrosine phosphatase activity

protein binding

cytoplasm

cytosol

protein amino acid dephosphorylation

signal transduction

hydrolase activity

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Adipocytokine signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

Renal cell carcinoma

Chronic myeloid leukemia

226026_at -0.391 7.505 -2.159 4.719e-02 0.551 -3.993 DIRC2 disrupted in renal carcinoma 2 3 123996590 AI147467 3q21.1 Hs.477346 7

transport

membrane

integral to membrane

 
223484_at -0.179 2.940 -2.159 4.722e-02 0.552 -3.994 C15orf48 chromosome 15 open reading frame 48 15 43510054 AF228422 15q21.1 Hs.112242 5

nucleus

 
209961_s_at 0.216 4.969 2.158 4.729e-02 0.552 -3.995 HGF hepatocyte growth factor (hepapoietin A; scatter factor) 7 -81218151, -81209942, -81169379 M60718 7q21.1 Hs.396530 327

activation of MAPK activity

cell morphogenesis

epithelial to mesenchymal transition

liver development

catalytic activity

serine-type endopeptidase activity

protein binding

extracellular region

proteolysis

anti-apoptosis

mitosis

growth factor activity

platelet alpha granule lumen

hepatocyte growth factor receptor signaling pathway

myoblast proliferation

regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling

Cytokine-cytokine receptor interaction

Focal adhesion

Pathways in cancer

Renal cell carcinoma

Melanoma

208643_s_at -0.244 8.176 -2.158 4.731e-02 0.552 -3.995 XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 2 216682264 J04977 2q35 Hs.388739 148

nucleotide binding

telomere maintenance

nuclear telomere cap complex

DNA binding

double-stranded telomeric DNA binding

ATP-dependent DNA helicase activity

helicase activity

ATP binding

nucleus

nucleoplasm

chromosome

double-strand break repair via nonhomologous end joining

response to DNA damage stimulus

protein C-terminus binding

promoter binding

hydrolase activity

provirus integration

initiation of viral infection

Non-homologous end-joining

229289_at 0.336 5.567 2.158 4.731e-02 0.552 -3.995 FAM71E1 family with sequence similarity 71, member E1 19 -55661856 AL517395 19q13.33 Hs.448941 1    
217886_at -0.383 7.908 -2.158 4.734e-02 0.552 -3.996 EPS15 epidermal growth factor receptor pathway substrate 15 1 -51592523, -51592522 BF213575 1p32 Hs.83722 63

calcium ion binding

protein binding

cytoplasm

endosome

cytosol

plasma membrane

coated pit

epidermal growth factor receptor signaling pathway

cell proliferation

protein transport

vesicle organization

SH3 domain binding

Endocytosis

220559_at 0.430 5.463 2.157 4.736e-02 0.552 -3.996 EN1 engrailed homeobox 1 2 -119316216 NM_001426 2q13-q21 Hs.271977 20

skeletal system development

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anatomical structure morphogenesis

dorsal/ventral pattern formation

proximal/distal pattern formation

midbrain development

hindbrain development

midbrain-hindbrain boundary development

embryonic forelimb morphogenesis

pigmentation

sequence-specific DNA binding

neuron development

 
231704_at -0.237 4.334 -2.157 4.737e-02 0.552 -3.996 CYP3A4 cytochrome P450, family 3, subfamily A, polypeptide 4 7 -99192539 AV650252 7q21.1 Hs.654391 362

steroid binding

cytoplasm

endoplasmic reticulum

microsome

lipid metabolic process

steroid metabolic process

electron carrier activity

cell surface

membrane

integral to membrane

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen

drug metabolic process

oxygen binding

heme binding

vitamin D3 25-hydroxylase activity

taurochenodeoxycholate 6alpha-hydroxylase activity

vitamin D metabolic process

metal ion binding

albendazole monooxygenase activity

quinine 3-monooxygenase activity

testosterone 6-beta-hydroxylase activity

oxidation reduction

gamma-Hexachlorocyclohexane degradation

Linoleic acid metabolism

Retinol metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

Drug metabolism - other enzymes

Metabolic pathways

225212_at -0.797 7.631 -2.157 4.737e-02 0.552 -3.996 SLC25A25 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25 9 129870299, 129893948, 129900637, 129900656 BC005163 9q34.11 Hs.5476 6

binding

calcium ion binding

mitochondrion

mitochondrial inner membrane

transport

membrane

integral to membrane

 
202278_s_at -0.160 5.620 -2.157 4.738e-02 0.552 -3.996 SPTLC1 serine palmitoyltransferase, long chain base subunit 1 9 -93881166, -93833247 NM_006415 9q22.2 Hs.90458 22

serine C-palmitoyltransferase activity

protein binding

endoplasmic reticulum

acyltransferase activity

biosynthetic process

membrane

integral to membrane

transferase activity, transferring nitrogenous groups

serine C-palmitoyltransferase complex

sphingolipid biosynthetic process

pyridoxal phosphate binding

Sphingolipid metabolism

Metabolic pathways

231006_at -0.217 5.769 -2.157 4.739e-02 0.552 -3.996 SPATA8 spermatogenesis associated 8 15 95127682 AI638541 15q26.2 Hs.326528 3    
1555787_at 0.183 4.156 2.157 4.741e-02 0.552 -3.997 C11orf63 chromosome 11 open reading frame 63 11 122258682, 122258682 BC009820 11q24.1 Hs.164705 3    
204070_at 0.482 5.955 2.157 4.742e-02 0.552 -3.997 RARRES3 retinoic acid receptor responder (tazarotene induced) 3 11 63060848 NM_004585 11q23 Hs.17466 37

negative regulation of cell proliferation

 
218573_at 0.220 7.227 2.157 4.743e-02 0.552 -3.997 MAGEH1 melanoma antigen family H, 1 X 55495262 NM_014061 Xp11.21 Hs.279819 11

apoptosis

 
215911_x_at -0.238 3.056 -2.157 4.744e-02 0.552 -3.997 ATP2B3 ATPase, Ca++ transporting, plasma membrane 3 X 152454773 AW615612 Xq28 Hs.533956 Hs.658008 15

nucleotide binding

magnesium ion binding

calcium-transporting ATPase activity

calcium ion binding

calmodulin binding

ATP binding

Golgi apparatus

plasma membrane

ATP biosynthetic process

cation transport

calcium ion transport

metabolic process

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

Calcium signaling pathway

221723_s_at 0.210 4.332 2.156 4.747e-02 0.552 -3.998 SLC4A5 solute carrier family 4, sodium bicarbonate cotransporter, member 5 2 -74302068, -74296876 AF243499 2p13 Hs.594099 10

transporter activity

inorganic anion exchanger activity

plasma membrane

sodium ion transport

anion transport

anion transmembrane transporter activity

integral to membrane

sodium ion binding

 
210115_at 0.313 4.086 2.155 4.755e-02 0.553 -3.999 RPL39L ribosomal protein L39-like 3 -188321434 L05096 3q27 Hs.647900 4

structural constituent of ribosome

intracellular

ribosome

translation

spermatogenesis

cytosolic large ribosomal subunit

 
222058_at 0.163 4.403 2.155 4.756e-02 0.553 -4.000 RNF130 ring finger protein 130 5 -179315079 AW194818 5q35.3 Hs.484363 7

molecular_function

protein binding

apoptosis

zinc ion binding

membrane

integral to membrane

metal ion binding

 
224711_at -0.264 7.839 -2.155 4.756e-02 0.553 -4.000 YY1 YY1 transcription factor 14 99774854 AI670903 14q Hs.388927 97

transcription factor activity

transcription coactivator activity

transcription corepressor activity

protein binding

intracellular

nucleus

transcription factor complex

plasma membrane

regulation of transcription from RNA polymerase II promoter

zinc ion binding

anterior/posterior pattern formation

nuclear matrix

PcG protein complex

metal ion binding

camera-type eye morphogenesis

 
213901_x_at -0.353 7.998 -2.155 4.756e-02 0.553 -4.000 RBM9 RNA binding motif protein 9 22 -34464728, -34464728 AW149379 22q13.1 Hs.282998 18

nucleotide binding

transcription corepressor activity

RNA binding

nucleus

cytoplasm

mRNA processing

transcription factor binding

RNA splicing

RNA metabolic process

negative regulation of transcription

estrogen receptor signaling pathway

regulation of cell proliferation

 
211799_x_at 0.277 8.293 2.155 4.760e-02 0.553 -4.000 HLA-C major histocompatibility complex, class I, C 6 -31344507, -2686290, -2483726 U62824 6p21.3 Hs.654404 Hs.656020 Hs.77961 521

antigen processing and presentation of peptide antigen via MHC class I

extracellular region

plasma membrane

integral to plasma membrane

immune response

immune response

membrane

integral to membrane

antigen processing and presentation

MHC class I receptor activity

MHC class I protein complex

interspecies interaction between organisms

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

224622_at -0.240 7.355 -2.155 4.761e-02 0.553 -4.000 TBC1D14 TBC1 domain family, member 14 4 6962071, 6962395, 7039789 AB037743 4p16.1 Hs.518611 7

GTPase activator activity

Rab GTPase activator activity

intracellular

regulation of Rab GTPase activity

 
210638_s_at -0.186 8.833 -2.155 4.761e-02 0.553 -4.000 FBXO9 F-box protein 9 6 53037754, 53038215, 53043729 AF176704 6p12.3-p11.2 Hs.216653 9

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein ubiquitination

modification-dependent protein catabolic process

 
229376_at 0.482 5.757 2.154 4.770e-02 0.553 -4.002 PROX1 prospero homeobox 1 1 212228482 BF223556 1q32.2-q32.3 Hs.585369 34

cell fate determination

kidney development

liver development

lymph vessel development

DNA binding

RNA polymerase II transcription factor activity, enhancer binding

nucleus

cytoplasm

multicellular organismal development

brain development

negative regulation of cell proliferation

dorsal spinal cord development

neural tube development

muscle thin filament assembly

lung development

transcription regulator activity

olfactory placode formation

pancreas development

otic placode formation

endothelial cell differentiation

regulation of transcription

positive regulation of cell cycle

optic placode formation involved in camera-type eye

venous blood vessel morphogenesis

ventricular cardiac myofibril development

atrial cardiac muscle morphogenesis

ventricular cardiac muscle morphogenesis

retina morphogenesis in camera-type eye

endocardium formation

positive regulation of sarcomere organization

ventricular septum morphogenesis

aorta smooth muscle tissue morphogenesis

positive regulation of heart growth

lens fiber cell morphogenesis

 
212257_s_at -0.274 4.450 -2.154 4.771e-02 0.553 -4.002 SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 9 2005341 AW131754 9p22.3 Hs.298990 63

nucleotide binding

DNA binding

transcription coactivator activity

helicase activity

protein binding

ATP binding

nucleus

nucleoplasm

chromatin remodeling

regulation of transcription from RNA polymerase II promoter

DNA-dependent ATPase activity

positive regulation of specific transcription from RNA polymerase II promoter

negative regulation of specific transcription from RNA polymerase II promoter

SWI/SNF complex

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

 
210695_s_at 0.237 6.820 2.153 4.773e-02 0.553 -4.003 WWOX WW domain containing oxidoreductase 16 76691051, 76691051, 76691051 U13395 16q23.3-q24.1 Hs.461453 64

nucleus

cytoplasm

mitochondrion

Golgi apparatus

steroid metabolic process

oxidoreductase activity

oxidoreductase activity

protein dimerization activity

coenzyme binding

oxidation reduction

 
213538_at -0.248 6.848 -2.153 4.774e-02 0.553 -4.003 SON SON DNA binding protein 21 33837219, 33837219 AI936458 21q22.1-q22.2 21q22.11 Hs.517262 28

DNA binding

double-stranded RNA binding

protein binding

cellular_component

intracellular

nucleus

anti-apoptosis

nuclear speck

 
1552338_at 0.266 3.678 2.153 4.779e-02 0.554 -4.004 GSC goosecoid homeobox 14 -94304312 AY177407 14q32.1 Hs.440438 9

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

protein binding

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

multicellular organismal development

gastrulation

anatomical structure morphogenesis

dorsal/ventral neural tube patterning

negative regulation of Wnt receptor signaling pathway

forebrain development

sequence-specific DNA binding

ear development

muscle organ morphogenesis

embryonic skeletal system morphogenesis

 
212274_at -0.383 9.759 -2.153 4.779e-02 0.554 -4.004 LPIN1 lipin 1 2 11804190 AV705559 2p25.1 Hs.467740 28

molecular_function

nucleus

lipid metabolic process

phosphatidate phosphatase activity

ruffle organization

actin cytoskeleton reorganization

cellular response to insulin stimulus

regulation of fat cell differentiation

 
213231_at 0.169 4.142 2.153 4.779e-02 0.554 -4.004 DMWD dystrophia myotonica, WD repeat containing 19 -50978103 L19267 19q13.3 Hs.515474 13

molecular_function

cellular_component

meiosis

 
213201_s_at 0.255 13.412 2.152 4.781e-02 0.554 -4.004 TNNT1 troponin T type 1 (skeletal, slow) 19 -60335972 AJ011712 19q13.4 Hs.631558 29

skeletal muscle contraction

protein binding

tropomyosin binding

troponin complex

troponin complex

negative regulation of muscle contraction

 
231603_at 0.179 2.786 2.152 4.783e-02 0.554 -4.004 RNASE11 ribonuclease, RNase A family, 11 (non-active) 14 -20120891 AW188146 14q11.2 Hs.112761 5

nucleic acid binding

endonuclease activity

pancreatic ribonuclease activity

extracellular region

hydrolase activity

 
224326_s_at -0.335 6.486 -2.152 4.783e-02 0.554 -4.004 PCGF6 polycomb group ring finger 6 10 -105052542 AB047006 10q24.33 Hs.719328 12

transcription factor activity

protein binding

nucleus

zinc ion binding

negative regulation of transcription

PcG protein complex

metal ion binding

 
213314_at -0.347 4.857 -2.152 4.786e-02 0.554 -4.005 C6orf162 chromosome 6 open reading frame 162 6 88089024 NM_020425 6q15-q16.1 Hs.70769 4

membrane

integral to membrane

 
205167_s_at 0.234 3.429 2.152 4.788e-02 0.554 -4.005 CDC25C cell division cycle 25 homolog C (S. pombe) 5 -137648857 NM_001790 5q31 Hs.656 108

regulation of cyclin-dependent protein kinase activity

protein tyrosine phosphatase activity

protein binding

cellular_component

intracellular

nucleus

nucleoplasm

cytoplasm

cytosol

DNA replication

protein amino acid dephosphorylation

cell cycle

regulation of mitosis

traversing start control point of mitotic cell cycle

cell proliferation

hydrolase activity

interspecies interaction between organisms

WW domain binding

cell division

Cell cycle

65585_at 0.313 4.208 2.152 4.790e-02 0.554 -4.006 FAM86B1 family with sequence similarity 86, member B1 8 -12077021 AA527515 8p23.1 Hs.458413 Hs.567527 3    
231770_x_at 0.201 6.146 2.151 4.790e-02 0.554 -4.006 C2orf86 chromosome 2 open reading frame 86 2 -63202038, -63202038 AK022647 2p15 Hs.414952 6    
206202_at 0.163 2.233 2.151 4.793e-02 0.554 -4.006 MEOX2 mesenchyme homeobox 2 7 -15617361 NM_005924 7p22.1-p21.3 Hs.170355 19

angiogenesis

somite specification

transcription factor activity

protein binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

multicellular organismal development

skeletal muscle tissue development

blood circulation

sequence-specific DNA binding

palate development

limb development

 
215111_s_at -0.243 10.524 -2.151 4.793e-02 0.554 -4.006 TSC22D1 TSC22 domain family, member 1 13 -43905658, -43905654 AK027071 13q14 Hs.507916 23

transcription factor activity

protein binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

 
222626_at -0.249 4.971 -2.151 4.794e-02 0.554 -4.006 RBM26 RNA binding motif protein 26 13 -78792099 T79937 13q31.1 Hs.558528 8

nucleotide binding

RNA binding

zinc ion binding

metal ion binding

 
218794_s_at -0.216 5.401 -2.151 4.795e-02 0.554 -4.007 TXNL4B thioredoxin-like 4B 16 -70676258, -70676258, -70676258 NM_017853 16q22.2 Hs.134406 12

nucleus

spliceosomal complex

mRNA processing

cell cycle

mitosis

RNA splicing

 
230264_s_at -0.329 9.723 -2.150 4.801e-02 0.554 -4.008 AP1S2 adaptor-related protein complex 1, sigma 2 subunit X -15753849 AA551090 Xp22.2 Hs.653504 Hs.656471 21

protein binding

Golgi apparatus

cytosol

coated pit

intracellular protein transport

endocytosis

protein transporter activity

membrane

clathrin coat of trans-Golgi network vesicle

clathrin adaptor complex

cytoplasmic vesicle

Lysosome

217150_s_at 0.269 5.123 2.150 4.802e-02 0.554 -4.008 NF2 neurofibromin 2 (merlin) 22 28329544, 28329544 S73854 22q12.2 Hs.187898 131

mesoderm formation

ruffle

negative regulation of cell-matrix adhesion

nucleus

nucleolus

cytoplasm

early endosome

cytoskeleton

plasma membrane

adherens junction

negative regulation of protein kinase activity

ectoderm development

cytoskeletal protein binding

negative regulation of DNA replication

negative regulation of cell proliferation

negative regulation of cell proliferation

Schwann cell proliferation

extrinsic to membrane

negative regulation of cell-cell adhesion

lamellipodium

actin cytoskeleton organization

filopodium

negative regulation of cell migration

cleavage furrow

odontogenesis of dentine-containing tooth

negative regulation of tyrosine phosphorylation of Stat3 protein

negative regulation of tyrosine phosphorylation of Stat5 protein

negative regulation of MAPKKK cascade

cell-cell junction organization

negative regulation of JAK-STAT cascade

perinuclear region of cytoplasm

positive regulation of stress fiber formation

 
241937_s_at 0.395 4.444 2.150 4.802e-02 0.554 -4.008 WDR4 WD repeat domain 4 21 -43142404, -43136272 AA577678 21q22.3 Hs.248815 10

protein binding

nucleus

nucleoplasm

cytoplasm

tRNA modification

tRNA (guanine-N7-)-methyltransferase activity

 
229043_at -0.391 6.264 -2.150 4.805e-02 0.554 -4.008 PAPD5 PAP associated domain containing 5 16 48745568 AI492902 16q12.1 Hs.514342 5

molecular_function

DNA binding

DNA-directed DNA polymerase activity

cellular_component

nucleus

DNA replication

cell cycle

mitosis

biological_process

transferase activity

nucleotidyltransferase activity

cell division

 
209742_s_at 0.170 13.751 2.149 4.811e-02 0.555 -4.009 MYL2 myosin, light chain 2, regulatory, cardiac, slow 12 -109833006 AF020768 12q24.11 Hs.75535 34

motor activity

actin monomer binding

calcium ion binding

protein binding

regulation of striated muscle contraction

structural constituent of muscle

myosin complex

sarcomere

negative regulation of cell growth

myosin heavy chain binding

cardiac myofibril assembly

ventricular cardiac muscle morphogenesis

heart contraction

Focal adhesion

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Hypertrophic cardiomyopathy (HCM)

210374_x_at 0.162 4.647 2.149 4.813e-02 0.555 -4.010 PTGER3 prostaglandin E receptor 3 (subtype EP3) 1 -71244124, -71209051, -71190702, -71090623 D38300 1p31.2 Hs.445000 45

ligand-dependent nuclear receptor activity

G-protein coupled receptor activity

prostaglandin E receptor activity

nuclear envelope

plasma membrane

integral to plasma membrane

transcription, DNA-dependent

signal transduction

G-protein coupled receptor protein signaling pathway

cell death

Calcium signaling pathway

Neuroactive ligand-receptor interaction

225069_at -0.306 8.085 -2.149 4.814e-02 0.555 -4.010 PCYT1A phosphate cytidylyltransferase 1, choline, alpha 3 -197449649 BF063382 3q29 Hs.435767 15

choline-phosphate cytidylyltransferase activity

soluble fraction

cytoplasm

endoplasmic reticulum membrane

cytosol

phosphatidylcholine biosynthetic process

phospholipid biosynthetic process

biosynthetic process

response to abiotic stimulus

membrane

transferase activity

nucleotidyltransferase activity

glycogen granule

Aminophosphonate metabolism

Glycerophospholipid metabolism

Metabolic pathways

207574_s_at -0.653 6.360 -2.148 4.819e-02 0.555 -4.011 GADD45B growth arrest and DNA-damage-inducible, beta 19 2427134 NM_015675 19p13.3 Hs.110571 33

activation of MAPKKK activity

activation of MAPKK activity

protein binding

negative regulation of protein kinase activity

apoptosis

response to stress

multicellular organismal development

cell differentiation

regulation of cell cycle

MAPK signaling pathway

Cell cycle

p53 signaling pathway

218108_at -0.234 6.381 -2.148 4.819e-02 0.555 -4.011 UBR7 ubiquitin protein ligase E3 component n-recognin 7 (putative) 14 92743153 NM_018108 14q32.12 Hs.648806 7

molecular_function

ubiquitin-protein ligase activity

protein binding

biological_process

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
228302_x_at 0.180 3.618 2.148 4.822e-02 0.555 -4.011 CAMK2N1 calcium/calmodulin-dependent protein kinase II inhibitor 1 1 -20681470 AW162846 1p36.12 Hs.197922 4

plasma membrane

calcium-dependent protein kinase inhibitor activity

postsynaptic density

synaptosome

protein kinase binding

cell junction

dendrite

cell soma

synapse

postsynaptic membrane

 
210458_s_at -0.526 4.705 -2.148 4.822e-02 0.555 -4.011 TANK TRAF family member-associated NFKB activator 2 161701711, 161701711 BC003388 2q24-q31 Hs.132257 22

protein binding

cytoplasm

signal transduction

zinc ion binding

metal ion binding

RIG-I-like receptor signaling pathway

229861_at 0.292 5.353 2.148 4.825e-02 0.555 -4.012 RFFL ring finger and FYVE-like domain containing 1 17 -30360243, -30360243 N66669 17q12 Hs.13680 11

protein binding

cytoplasm

intracellular protein transport

apoptosis

zinc ion binding

membrane

cytoplasmic membrane-bounded vesicle

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
226035_at 0.448 6.610 2.148 4.826e-02 0.555 -4.012 USP31 ubiquitin specific peptidase 31 16 -22980228 AA102581 16p12.2 Hs.183817 8

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
240164_at 0.279 3.980 2.147 4.827e-02 0.555 -4.012 MUC4 mucin 4, cell surface associated 3 -196959308 AW388645 3q29 Hs.369646 71

ErbB-2 class receptor binding

protein binding

extracellular region

proteinaceous extracellular matrix

integral to plasma membrane

cell adhesion

cell-matrix adhesion

biological_process

membrane

extracellular matrix constituent, lubricant activity

 
220350_at 0.257 4.720 2.147 4.828e-02 0.555 -4.012 ZNF235 zinc finger protein 235 19 -49482340 NM_004234 19q13.2 Hs.298089 Hs.613424 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
214925_s_at -0.276 4.899 -2.147 4.830e-02 0.555 -4.013 SPTAN1 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) 9 130354686 AK026484 9q33-q34 Hs.372331 70

actin binding

structural constituent of cytoskeleton

calcium ion binding

calmodulin binding

membrane fraction

cytoplasm

cytosol

cytoskeleton

cell cortex

spectrin

actin filament capping

Tight junction

221413_at 0.193 4.764 2.147 4.831e-02 0.555 -4.013 KCNAB3 potassium voltage-gated channel, shaker-related subfamily, beta member 3 17 -7766751 NM_004732 17p13.1 Hs.435074 6

voltage-gated ion channel activity

voltage-gated potassium channel activity

cytoplasm

ion transport

potassium ion transport

potassium channel regulator activity

integral to membrane

oxidoreductase activity

potassium ion binding

oxidation reduction

 
213656_s_at -0.273 9.144 -2.147 4.832e-02 0.555 -4.013 KLC1 kinesin light chain 1 14 103165277, 103165277 BF593594 14q32.3 Hs.20107 Hs.657678 31

microtubule motor activity

protein binding

cytoplasm

cytosol

kinesin complex

microtubule

axon cargo transport

axon

cytoplasmic vesicle

ciliary rootlet

membrane-bounded organelle

 
207458_at 0.176 5.401 2.147 4.832e-02 0.555 -4.013 C8orf51 chromosome 8 open reading frame 51 8 -144520168 NM_024035 8q24 Hs.245886 Hs.618477 4    
204920_at 0.293 5.192 2.147 4.833e-02 0.555 -4.013 CPS1 carbamoyl-phosphate synthetase 1, mitochondrial 2 211050653, 211129570, 211166334 AF154830 2q35 Hs.149252 23

urea cycle

nucleotide binding

carbamoyl-phosphate synthase (ammonia) activity

protein binding

ATP binding

mitochondrion

glycogen catabolic process

glutamine metabolic process

ligase activity

citrulline biosynthetic process

triglyceride catabolic process

response to lipopolysaccharide

mitochondrial nucleoid

positive regulation of vasodilation

nitric oxide metabolic process

carbamoyl phosphate biosynthetic process

Alanine, aspartate and glutamate metabolism

Arginine and proline metabolism

Nitrogen metabolism

Metabolic pathways

225597_at 0.235 3.841 2.147 4.833e-02 0.555 -4.013 SLC45A4 solute carrier family 45, member 4 8 -142290051 AI346128 8q24.3 Hs.372492 2

transport

membrane

integral to membrane

 
213647_at 0.359 5.679 2.147 4.835e-02 0.555 -4.014 DNA2 DNA replication helicase 2 homolog (yeast) 10 -69843826 D42046 10q21.3-q22.1 Hs.532446 11

nucleotide binding

DNA binding

ATP-dependent DNA helicase activity

helicase activity

ATP binding

nucleoplasm

mitochondrion

gamma DNA polymerase complex

mitochondrial DNA replication

base-excision repair

hydrolase activity

ATPase activity

site-specific endodeoxyribonuclease activity, specific for altered base

5'-flap endonuclease activity

DNA replication, removal of RNA primer

positive regulation of DNA replication

DNA replication

205237_at 0.187 3.965 2.146 4.836e-02 0.555 -4.014 FCN1 ficolin (collagen/fibrinogen domain containing) 1 9 -136941254 NM_002003 9q34 Hs.440898 20

antigen binding

receptor binding

calcium ion binding

sugar binding

extracellular region

signal transduction

opsonization

 
217173_s_at -0.179 5.893 -2.146 4.838e-02 0.555 -4.014 LDLR low density lipoprotein receptor 19 11061056 S70123 19p13.3 Hs.213289 Hs.713967 374

transmembrane receptor activity

low-density lipoprotein receptor activity

calcium ion binding

endosome

plasma membrane

plasma membrane

integral to plasma membrane

coated pit

protein amino acid O-linked glycosylation

lipid metabolic process

lipid transport

endocytosis

steroid metabolic process

cholesterol metabolic process

endosome membrane

very-low-density lipoprotein receptor activity

intestinal cholesterol absorption

clathrin-coated endocytic vesicle membrane

low-density lipoprotein particle

low-density lipoprotein particle clearance

lipoprotein catabolic process

cholesterol homeostasis

interspecies interaction between organisms

Endocytosis

217803_at -0.425 7.676 -2.146 4.839e-02 0.555 -4.014 GOLPH3 golgi phosphoprotein 3 (coat-protein) 5 -32160580 NM_022130 5p13.3 Hs.408909 6

protein binding

cytoplasm

mitochondrion

Golgi apparatus

trans-Golgi network

membrane

positive regulation of TOR signaling pathway

 
232183_at -0.240 6.202 -2.146 4.843e-02 0.555 -4.015 SERAC1 serine active site containing 1 6 -158450523 AA128978 6q25.3 Hs.154706 6

binding

membrane

integral to membrane

 
226338_at -0.397 6.736 -2.145 4.845e-02 0.555 -4.015 TMEM55A transmembrane protein 55A 8 -92075674 AA604382 8q21.3 Hs.202517 4

lysosome

endosome

membrane

integral to membrane

hydrolase activity

 
229526_at 0.643 5.380 2.145 4.847e-02 0.555 -4.016 AQP11 aquaporin 11 11 76978327 AI886656 11q14.1 Hs.503345 5

kidney development

transporter activity

cytoplasm

endoplasmic reticulum

ion transport

water transport

cell surface

glycerol transport

urea transport

membrane

integral to membrane

endosomal lumen acidification

 
219862_s_at -0.338 7.863 -2.145 4.850e-02 0.556 -4.016 NARF nuclear prelamin A recognition factor 17 78009348, 78009828 NM_012336 17q25.3 Hs.256526 Hs.600304 10

lamin binding

nucleus

lamin filament

nuclear lumen

 
219717_at -0.574 4.978 -2.145 4.850e-02 0.556 -4.016 DCAF16 DDB1 and CUL4 associated factor 16 4 -17411375 NM_017741 4p15.31 Hs.614787 2    
230263_s_at -0.663 3.961 -2.144 4.854e-02 0.556 -4.017 DOCK5 dedicator of cytokinesis 5 8 25098203 BF447954 8p21.2 Hs.195403 7

guanyl-nucleotide exchange factor activity

cytoplasm

 
212069_s_at 0.249 6.337 2.144 4.856e-02 0.556 -4.017 BAT2L HLA-B associated transcript 2-like 9 133295297 AK026025 9q34.13 Hs.495349 Hs.703868 9    
230674_at -0.232 4.080 -2.144 4.859e-02 0.556 -4.018 LGR4 leucine-rich repeat-containing G protein-coupled receptor 4 11 -27344083 BE502880 11p14-p13 Hs.502176 6

receptor activity

protein binding

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

integral to membrane

protein-hormone receptor activity

 
209409_at -0.568 8.607 -2.144 4.859e-02 0.556 -4.018 GRB10 growth factor receptor-bound protein 10 7 -50625253, -50625253, -50625253 D86962 7p12-p11.2 Hs.164060 51

SH3/SH2 adaptor activity

insulin receptor binding

protein binding

cytoplasm

plasma membrane

signal transduction

cell-cell signaling

negative regulation of glucose import

negative regulation of insulin receptor signaling pathway

 
202417_at -0.336 8.783 -2.144 4.860e-02 0.556 -4.018 KEAP1 kelch-like ECH-associated protein 1 19 -10457795, -10457795 NM_012289 19p13.2 Hs.465870 51

in utero embryonic development

protein binding

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

centrosome

transcription regulator activity

regulation of transcription

regulation of epidermal cell differentiation

Ubiquitin mediated proteolysis

202981_x_at -0.246 8.135 -2.144 4.860e-02 0.556 -4.018 SIAH1 seven in absentia homolog 1 (Drosophila) 16 -46951954, -46951946 NM_003031 16q12 Hs.295923 64

ubiquitin-protein ligase activity

nucleus

cytoplasm

proteolysis

ubiquitin-dependent protein catabolic process

apoptosis

cell cycle

multicellular organismal development

spermatogenesis

nervous system development

axon guidance

protein C-terminus binding

zinc ion binding

anatomical structure morphogenesis

protein ubiquitination

ligase activity

cell differentiation

metal ion binding

p53 signaling pathway

Ubiquitin mediated proteolysis

Wnt signaling pathway

227310_at 0.176 3.014 2.144 4.862e-02 0.556 -4.018 ADSS adenylosuccinate synthase 1 -242638418 AI346678 1cen-q12 Hs.498313 11

nucleotide binding

magnesium ion binding

immune system process

adenylosuccinate synthase activity

adenylosuccinate synthase activity

GTP binding

cellular_component

cytoplasm

purine nucleotide biosynthetic process

AMP biosynthetic process

AMP biosynthetic process

ligase activity

phosphate binding

Purine metabolism

Alanine, aspartate and glutamate metabolism

Biosynthesis of alkaloids derived from histidine and purine

Metabolic pathways

212932_at -0.227 5.754 -2.144 4.862e-02 0.556 -4.018 RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 2 135526322 AK022494 2q21.3 Hs.306327 17

GTPase activator activity

Rab GTPase activator activity

soluble fraction

cytoplasm

Rab GTPase binding

regulation of GTPase activity

 
204053_x_at -0.303 6.591 -2.144 4.863e-02 0.556 -4.019 PTEN phosphatase and tensin homolog 10 89613174 U96180 10q23.3 Hs.500466 557

regulation of cyclin-dependent protein kinase activity

magnesium ion binding

angiogenesis

phosphatidylinositol-3-phosphatase activity

protein serine/threonine phosphatase activity

protein tyrosine phosphatase activity

platelet-derived growth factor receptor binding

protein binding

nucleus

cytoplasm

cytoplasm

cytosol

protein amino acid dephosphorylation

protein amino acid dephosphorylation

lipid metabolic process

induction of apoptosis

central nervous system development

protein tyrosine/serine/threonine phosphatase activity

negative regulation of cell proliferation

lipid binding

phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity

phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity

hydrolase activity

PDZ domain binding

negative regulation of cell migration

neuron projection development

regulation of protein stability

negative regulation of apoptosis

endothelial cell migration

inositol phosphate dephosphorylation

phosphoinositide dephosphorylation

platelet-derived growth factor receptor signaling pathway

cardiac muscle tissue development

inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity

phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity

negative regulation of focal adhesion formation

negative regulation of protein kinase B signaling cascade

Inositol phosphate metabolism

Phosphatidylinositol signaling system

p53 signaling pathway

Focal adhesion

Tight junction

Pathways in cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Small cell lung cancer

228346_at 0.389 6.290 2.143 4.866e-02 0.556 -4.019 ZNF844 zinc finger protein 844 19 12036545 H47630 19p13.2 Hs.646391 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
222907_x_at -0.515 5.851 -2.143 4.869e-02 0.556 -4.020 TMEM50B transmembrane protein 50B 21 -33743317 BC000569 21q22.11 Hs.433668 8

molecular_function

endoplasmic reticulum

plasma membrane

biological_process

integral to membrane

 
224206_x_at -0.320 6.499 -2.143 4.869e-02 0.556 -4.020 MYNN myoneurin 3 170973546 AF155508 3q26.2 Hs.507025 6

transcription factor activity

protein binding

intracellular

nucleus

transcription, DNA-dependent

zinc ion binding

regulation of transcription

metal ion binding

 
222123_s_at 0.284 4.272 2.143 4.871e-02 0.556 -4.020 HIF3A hypoxia inducible factor 3, alpha subunit 19 51492144, 51493498, 51498715 AK021881 19q13.32 Hs.420830 12

DNA binding

signal transducer activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

signal transduction

transcription regulator activity

 
226500_at -0.171 8.750 -2.142 4.873e-02 0.556 -4.020 ZBTB47 zinc finger and BTB domain containing 47 3 42675877 AI806872 3p22.1 Hs.409561 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
202085_at -0.379 6.619 -2.142 4.874e-02 0.556 -4.020 TJP2 tight junction protein 2 (zona occludens 2) 9 70978908 NM_004817 9q13-q21 Hs.50382 49

guanylate kinase activity

protein binding

nucleus

cytoplasm

plasma membrane

adherens junction

tight junction

cell junction

Tight junction

Vibrio cholerae infection

216304_x_at -0.224 9.276 -2.142 4.874e-02 0.556 -4.021 YME1L1 YME1-like 1 (S. cerevisiae) 10 -27439388 AJ295618 10p14 Hs.499145 Hs.74647 9

nucleotide binding

metalloendopeptidase activity

ATP binding

mitochondrion

proteolysis

peptidase activity

zinc ion binding

membrane

nucleoside-triphosphatase activity

metal ion binding

 
216801_at 0.198 4.293 2.141 4.882e-02 0.556 -4.022 CROCC ciliary rootlet coiled-coil, rootletin 1 17121031 AK026910 1pter-p36.11 Hs.309403 10

structural molecule activity

protein binding

centriole

cell cycle

protein localization

kinesin binding

cell projection organization

ciliary rootlet

centrosome organization

 
1557073_s_at -0.297 5.441 -2.141 4.883e-02 0.556 -4.022 TTBK2 tau tubulin kinase 2 15 -40823835 AK074481 15q15.2 Hs.659846 Hs.713940 12

nucleotide binding

protein serine/threonine kinase activity

ATP binding

cell death

transferase activity

peptidyl-serine phosphorylation

 
231917_at -0.341 3.955 -2.141 4.884e-02 0.556 -4.022 GFM2 G elongation factor, mitochondrial 2 5 -74068249, -74052786 AK025314 5q13 Hs.277154 5

nucleotide binding

translation elongation factor activity

GTPase activity

GTP binding

mitochondrion

translation

 
1552878_at 0.157 2.230 2.141 4.885e-02 0.556 -4.022 ATOH7 atonal homolog 7 (Drosophila) 10 -69660387 BC032621 10q21.3 10q21.3-q22.1 Hs.175396 4

DNA binding

nucleus

multicellular organismal development

nervous system development

circadian rhythm

entrainment of circadian clock

cell differentiation

transcription regulator activity

regulation of transcription

 
219595_at 0.202 5.541 2.141 4.886e-02 0.556 -4.023 ZNF26 zinc finger protein 26 12 132073128 NM_019591 12q24.33 Hs.489608 7

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1569699_at 0.300 4.139 2.141 4.888e-02 0.556 -4.023 AK7 adenylate kinase 7 14 95928200 BC023986 14q32.2 Hs.667462 4

nucleotide binding

adenylate kinase activity

ATP binding

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

metabolic process

transferase activity

nucleobase, nucleoside, nucleotide kinase activity

Purine metabolism

Metabolic pathways

201135_at 0.269 10.281 2.141 4.888e-02 0.556 -4.023 ECHS1 enoyl Coenzyme A hydratase, short chain, 1, mitochondrial 10 -135025976 NM_004092 10q26.2-q26.3 Hs.76394 16

enoyl-CoA hydratase activity

enoyl-CoA hydratase activity

protein binding

mitochondrion

mitochondrial matrix

mitochondrial matrix

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

metabolic process

lyase activity

Fatty acid elongation in mitochondria

Fatty acid metabolism

Valine, leucine and isoleucine degradation

Lysine degradation

Tryptophan metabolism

beta-Alanine metabolism

Benzoate degradation via CoA ligation

Propanoate metabolism

Butanoate metabolism

Limonene and pinene degradation

Caprolactam degradation

Metabolic pathways

224436_s_at 0.502 7.121 2.141 4.889e-02 0.556 -4.023 NIPSNAP3A nipsnap homolog 3A (C. elegans) 9 106549789 BC005935 9q31.1 Hs.530275 6

cytoplasm

cytosol

 
235344_at -0.417 6.993 -2.140 4.894e-02 0.557 -4.024 PPM1A protein phosphatase 1A (formerly 2C), magnesium-dependent, alpha isoform 14 59782222, 59785718, 59785718 BG288054 14q23.1 Hs.130036 28

magnesium ion binding

protein serine/threonine phosphatase activity

signal transducer activity

cellular_component

membrane fraction

voltage-gated calcium channel complex

protein amino acid dephosphorylation

protein C-terminus binding

protein serine/threonine phosphatase complex

hydrolase activity

manganese ion binding

positive regulation of Wnt receptor signaling pathway

neuron projection

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of transcription, DNA-dependent

MAPK signaling pathway

219925_at -0.174 3.493 -2.140 4.894e-02 0.557 -4.024 ZMYM6 zinc finger, MYM-type 6 1 -35224353 NM_007167 1p34.2 Hs.533986 Hs.623978 Hs.675613 8

DNA binding

nucleus

nucleolus

multicellular organismal development

zinc ion binding

metal ion binding

 
220018_at -0.447 4.402 -2.140 4.899e-02 0.557 -4.025 CBLL1 Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1 7 107171514 NM_024814 7q22.3-q31.1 Hs.592271 9

protein binding

intracellular

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
220798_x_at 0.146 5.896 2.140 4.899e-02 0.557 -4.025 PRG2 plasticity-related gene 2 19 -763517 NM_024888 19p13.3 Hs.546439 5

phosphatidate phosphatase activity

membrane

integral to membrane

hydrolase activity

 
1560715_at 0.246 3.428 2.140 4.899e-02 0.557 -4.025 P4HA3 prolyl 4-hydroxylase, alpha polypeptide III 11 -73655349 AL833965 11q13.4 Hs.660541 4

procollagen-proline 4-dioxygenase activity

binding

iron ion binding

endoplasmic reticulum

endoplasmic reticulum lumen

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

L-ascorbic acid binding

metal ion binding

oxidation reduction

Arginine and proline metabolism

Metabolic pathways

228256_s_at 0.281 5.578 2.139 4.901e-02 0.557 -4.025 EPB41L4A erythrocyte membrane protein band 4.1 like 4A 5 -111526213 AU144565 5q22.1-q22.2 Hs.584954 7

binding

cellular_component

cytoplasm

cytoskeleton

cytoskeletal protein binding

biological_process

extrinsic to membrane

 
224437_s_at -0.279 8.207 -2.139 4.902e-02 0.557 -4.025 VTA1 Vps20-associated 1 homolog (S. cerevisiae) 6 142510102 BC005937 6q24.1 Hs.431367 12

cytoplasm

endosome

protein transport

membrane

Endocytosis

223367_at 0.340 6.770 2.139 4.903e-02 0.557 -4.026 DNAJC30 DnaJ (Hsp40) homolog, subfamily C, member 30 7 -72733183 BC005056 7q11.23 Hs.647046 6

protein folding

heat shock protein binding

unfolded protein binding

 
236313_at 0.953 5.377 2.139 4.903e-02 0.557 -4.026 CDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) 9 -21992901 AW444761 9p21 Hs.72901 158

regulation of cyclin-dependent protein kinase activity

G2/M transition of mitotic cell cycle

cyclin-dependent protein kinase inhibitor activity

protein binding

cytoplasm

cell cycle

cell cycle arrest

protein kinase binding

positive regulation of transforming growth factor beta receptor signaling pathway

G1/S transition checkpoint

cellular response to extracellular stimulus

cellular response to nutrient

negative regulation of phosphorylation

negative regulation of epithelial cell proliferation

Cell cycle

TGF-beta signaling pathway

Pathways in cancer

Small cell lung cancer

205988_at 0.198 4.907 2.139 4.908e-02 0.557 -4.026 CD84 CD84 molecule 1 -158782410 NM_003874 1q24 Hs.398093 23

receptor activity

protein binding

plasma membrane

integral to plasma membrane

defense response

cell adhesion

homophilic cell adhesion

 
228153_at -0.318 9.778 -2.139 4.908e-02 0.557 -4.027 RNF144B ring finger protein 144B 6 18495572 AI953847 6p22.3 Hs.148741 6

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

apoptosis

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

protein ubiquitination during ubiquitin-dependent protein catabolic process

metal ion binding

 
209200_at -0.432 10.422 -2.138 4.912e-02 0.557 -4.027 MEF2C myocyte enhancer factor 2C 5 -88049814, -88049814 AL536517 5q14 Hs.653394 56

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription, DNA-dependent

apoptosis

multicellular organismal development

nervous system development

muscle organ development

negative regulation of specific transcription from RNA polymerase II promoter

nuclear speck

cell differentiation

sequence-specific DNA binding

positive regulation of survival gene product expression

MAPK signaling pathway

231258_at -0.243 4.199 -2.138 4.914e-02 0.557 -4.027 TMEM66 transmembrane protein 66 8 -30040172 AV648367 8p12 Hs.521487 10

membrane

integral to membrane

 
200861_at 0.181 6.723 2.138 4.914e-02 0.557 -4.028 CNOT1 CCR4-NOT transcription complex, subunit 1 16 -57134732, -57111355 NM_016284 16q21 Hs.460923 Hs.716474 9

regulation of transcription

RNA degradation

221366_at -0.255 3.685 -2.137 4.922e-02 0.557 -4.029 NKX6-1 NK6 homeobox 1 4 -85633459 NM_006168 4q21.2-q22 Hs.546270 7

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

smoothened signaling pathway

multicellular organismal development

organ morphogenesis

regulation of transcription from RNA polymerase II promoter involved in spinal cord motor neuron fate specification

regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification

cell differentiation

endocrine pancreas development

sequence-specific DNA binding

intracellular part

positive regulation of neuron differentiation

negative regulation of glial cell differentiation

positive regulation of glial cell differentiation

oligodendrocyte differentiation

Maturity onset diabetes of the young

223167_s_at -0.659 8.359 -2.137 4.923e-02 0.557 -4.029 USP25 ubiquitin specific peptidase 25 21 16024366 AF170562 21q11.2 Hs.473370 11

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

protein modification process

proteolysis

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
209619_at 0.410 7.841 2.137 4.923e-02 0.557 -4.029 CD74 CD74 molecule, major histocompatibility complex, class II invariant chain 5 -149761394, -149761392 K01144 5q32 Hs.436568 58

prostaglandin biosynthetic process

intracellular

protein complex assembly

intracellular protein transport

immune response

signal transduction

cell proliferation

membrane

integral to membrane

immunoglobulin mediated immune response

antigen processing and presentation of endogenous antigen

cytokine binding

MHC class II protein binding

identical protein binding

regulation of macrophage activation

negative regulation of apoptosis

T cell selection

Antigen processing and presentation

63305_at 0.223 6.646 2.137 4.928e-02 0.558 -4.030 PKNOX2 PBX/knotted 1 homeobox 2 11 124539768 D81792   Hs.719275 7

transcription factor activity

actin monomer binding

nucleus

cytoplasm

regulation of transcription from RNA polymerase II promoter

actin cytoskeleton

microtubule cytoskeleton

sequence-specific DNA binding

actin filament binding

 
226269_at 0.395 4.990 2.136 4.929e-02 0.558 -4.030 GDAP1 ganglioside-induced differentiation-associated protein 1 8 75425172, 75425207 BF002104 8q21.11 Hs.168950 30

cytoplasm

response to retinoic acid

 
227272_at -0.231 7.763 -2.136 4.930e-02 0.558 -4.030 C15orf52 chromosome 15 open reading frame 52 15 -38410944 BE673226 15q15.1 Hs.32433 3    
217043_s_at -0.276 6.634 -2.135 4.940e-02 0.558 -4.032 MFN1 mitofusin 1 3 180548173 U95822 3q26.33 Hs.478383 16

nucleotide binding

GTPase activity

GTP binding

cytoplasm

mitochondrion

mitochondrial outer membrane

mitochondrial fusion

biological_process

membrane

integral to membrane

hydrolase activity

 
237111_at -0.263 3.863 -2.135 4.942e-02 0.558 -4.032 FLJ44450 hypothetical gene supported by AK126414 2   AW118588 2p21 Hs.631883      
208998_at 0.547 9.646 2.135 4.942e-02 0.558 -4.032 UCP2 uncoupling protein 2 (mitochondrial, proton carrier) 11 -73363363 U94592 11q13 Hs.80658 153

response to superoxide

binding

mitochondrion

mitochondrial inner membrane

transport

mitochondrial transport

proton transport

membrane

integral to membrane

 
235850_at 0.366 7.074 2.135 4.942e-02 0.558 -4.032 WDR5B WD repeat domain 5B 3 -123613389 BF434228 3q21.1 Hs.567513 Hs.594258 6

modification-dependent protein catabolic process

 
219836_at 0.233 4.081 2.135 4.942e-02 0.558 -4.032 ZBED2 zinc finger, BED-type containing 2 3 -112794436 NM_024508 3q13.2 Hs.136912 3

DNA binding

zinc ion binding

metal ion binding

 
232604_at 0.238 5.571 2.135 4.945e-02 0.559 -4.033 ZNF541 zinc finger protein 541 19 -52715759 AL136846 19q13.33 Hs.14161 3

DNA binding

intracellular

nucleus

multicellular organismal development

spermatogenesis

zinc ion binding

cell differentiation

regulation of transcription

metal ion binding

 
1557820_at -0.242 10.500 -2.135 4.946e-02 0.559 -4.033 AFG3L2 AFG3 ATPase family gene 3-like 2 (yeast) 18 -12319107 AA905788 18p11 Hs.528996 5

nucleotide binding

metalloendopeptidase activity

ATP binding

mitochondrion

mitochondrial inner membrane

proteolysis

axonogenesis

neuromuscular junction development

peptidase activity

zinc ion binding

membrane

integral to membrane

death

nucleoside-triphosphatase activity

nerve development

regulation of multicellular organism growth

myelination

metal ion binding

muscle fiber development

unfolded protein binding

righting reflex

 
227001_at 0.354 4.408 2.134 4.948e-02 0.559 -4.033 NIPAL2 NIPA-like domain containing 2 8 -99273562 AI096706 8q22.2 Hs.309489 3

membrane

integral to membrane

 
222779_s_at 0.181 5.682 2.134 4.952e-02 0.559 -4.034 C17orf85 chromosome 17 open reading frame 85 17 -3661208 AA706815 17p13.2 Hs.120963 6    
221645_s_at 0.399 4.360 2.134 4.955e-02 0.559 -4.035 ZNF83 zinc finger protein 83 19 -57807429, -57807429 M27877 19q13.3 Hs.467210 Hs.655934 Hs.659798 Hs.710125 9

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
208949_s_at 0.318 9.829 2.133 4.959e-02 0.559 -4.035 LGALS3 lectin, galactoside-binding, soluble, 3 14 54665624, 54673658 BC001120 14q21-q22 Hs.531081 162

skeletal system development

protein binding

sugar binding

proteinaceous extracellular matrix

nucleus

cytoplasm

plasma membrane

IgE binding

cell differentiation

extracellular matrix organization

 
235260_s_at -0.458 5.641 -2.133 4.959e-02 0.559 -4.035 PACRGL PARK2 co-regulated-like 4 20311133 AA398590 4p15.31 Hs.479298 5

binding

 
1560494_a_at -0.141 1.748 -2.133 4.963e-02 0.559 -4.036 CPXCR1 CPX chromosome region, candidate 1 X 87888881 AK098646 Xq21.3 Hs.458292 2

intracellular

zinc ion binding

 
232172_at 0.202 4.887 2.133 4.964e-02 0.559 -4.036 LOC401577 hypothetical protein LOC401577 X, Y   AK023533 Xp22.33 Yp11.31 Hs.444541 2    
215894_at 0.223 2.872 2.132 4.967e-02 0.560 -4.037 PTGDR prostaglandin D2 receptor (DP) 14 51804180 AI460323 14q22.1 Hs.306831 36

prostaglandin J receptor activity

receptor activity

G-protein coupled receptor activity

prostaglandin D receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

integral to membrane

male sex determination

Neuroactive ligand-receptor interaction

218291_at 0.274 7.666 2.132 4.971e-02 0.560 -4.037 ROBLD3 roadblock domain containing 3 1 154291140 NM_014017 1q22 Hs.632483 5

lysosome

endosome

membrane

 
203364_s_at -0.174 6.764 -2.132 4.974e-02 0.560 -4.038 KIAA0652 KIAA0652 11 46595401 NM_014741 11p11.2 Hs.127403 16    
209555_s_at -0.698 9.879 -2.131 4.975e-02 0.560 -4.038 CD36 CD36 molecule (thrombospondin receptor) 7 80069439, 80105767, 80105767, 80113580, 80113697 M98399 7q11.2 Hs.120949 173

positive regulation of cell-matrix adhesion

low-density lipoprotein receptor activity

membrane fraction

Golgi apparatus

plasma membrane

integral to plasma membrane

lipid metabolic process

transport

cell adhesion

nitric oxide mediated signal transduction

blood coagulation

high-density lipoprotein binding

lipid binding

cell surface

cell surface

positive regulation of foam cell differentiation

plasma membrane long-chain fatty acid transport

lipid storage

cGMP-mediated signaling

cholesterol transport

platelet alpha granule membrane

lipoprotein particle clearance

lipoprotein catabolic process

lipoprotein transport

apoptotic cell clearance

transforming growth factor beta binding

thrombospondin receptor activity

PPAR signaling pathway

ECM-receptor interaction

Hematopoietic cell lineage

Adipocytokine signaling pathway

209041_s_at 0.323 7.119 2.131 4.977e-02 0.560 -4.038 UBE2G2 ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) 21 -45013382 BG395660 21q22.3 Hs.529420 Hs.701398 19

nucleotide binding

ubiquitin-protein ligase activity

protein binding

ATP binding

cytosol

ubiquitin-dependent protein catabolic process

ligase activity

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

Parkinson's disease

207122_x_at 0.313 6.548 2.131 4.977e-02 0.560 -4.038 SULT1A2 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2 16 -28510766, -28510766 NM_001054 16p12.1 Hs.546304 25

aryl sulfotransferase activity

cytoplasm

catecholamine metabolic process

lipid metabolic process

steroid metabolic process

amine biosynthetic process

transferase activity

Sulfur metabolism

224636_at -0.298 8.964 -2.130 4.985e-02 0.561 -4.040 ZFP91 zinc finger protein 91 homolog (mouse) 11 58103162 AL045405 11q12 Hs.524920 10

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
222767_s_at -0.227 5.714 -2.130 4.987e-02 0.561 -4.040 C12orf49 chromosome 12 open reading frame 49 12 -115637978 AW872378 12q24.22 Hs.592011 2

extracellular region

 
218082_s_at -0.241 7.293 -2.130 4.987e-02 0.561 -4.040 UBP1 upstream binding protein 1 (LBP-1a) 3 -33404831, -33404831 NM_014517 3p22.3 Hs.643744 11

transcription factor activity

transcription corepressor activity

nucleus

regulation of transcription from RNA polymerase II promoter

negative regulation of transcription

specific transcriptional repressor activity

viral genome replication

 
206334_at 0.210 4.382 2.130 4.990e-02 0.561 -4.041 LIPF lipase, gastric 10 90414073 NM_004190 10q23.31 Hs.523130 25

triacylglycerol lipase activity

protein binding

extracellular region

mitochondrion

triglyceride metabolic process

lipid binding

lipid catabolic process

malate dehydrogenase activity

hydrolase activity

Glycerolipid metabolism

Metabolic pathways

203606_at 0.216 10.304 2.130 4.990e-02 0.561 -4.041 NDUFS6 NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase) 5 1854508 NM_004553 5p15.33 Hs.408257 15

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

transport

NADH dehydrogenase (ubiquinone) activity

electron carrier activity

membrane

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

219854_at 0.313 5.260 2.129 4.994e-02 0.561 -4.041 ZNF14 zinc finger protein 14 19 -19682280 NM_021030 19p13.3-p13.2 Hs.659932 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
204766_s_at 0.219 5.959 2.129 5.000e-02 0.562 -4.042 NUDT1 nudix (nucleoside diphosphate linked moiety X)-type motif 1 7 2248382, 2248421, 2249065 NM_002452 7p22 Hs.534331 46

GTPase activity

protein binding

cytoplasm

DNA repair

response to oxidative stress

8-oxo-7,8-dihydroguanine triphosphatase activity

hydrolase activity

 

3810 Genes