Bioconductor Affymetrix Probe Listing

Probe log2FC AveExpr t P.Value adj.P.Val B Symbol Description Chromosome Chromosome Location GenBank Gene Cytoband UniGene PubMed Gene Ontology Pathway
1556113_at -1.191 5.615 -10.208 3.335e-08 0.002 8.276 DKFZp451A211 DKFZp451A211 protein 13   BC036906 13q34 Hs.646609 1    
242414_at 1.476 5.714 8.560 3.339e-07 0.004 6.467 QPRT quinolinate phosphoribosyltransferase 16 29597941 AW960707 16p11.2 Hs.513484 8

nicotinate-nucleotide diphosphorylase (carboxylating) activity

nicotinate-nucleotide diphosphorylase (carboxylating) activity

cellular_component

cytosol

metabolic process

NAD biosynthetic process

transferase activity, transferring glycosyl groups

pyridine nucleotide biosynthetic process

quinolinate catabolic process

protein homodimerization activity

protein oligomerization

Nicotinate and nicotinamide metabolism

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Metabolic pathways

209190_s_at -1.006 7.858 -8.498 3.662e-07 0.004 6.391 DIAPH1 diaphanous homolog 1 (Drosophila) 5 -140874771 AF051782 5q31 Hs.529451 33

actin binding

receptor binding

cytoplasm

cytoskeleton

plasma membrane

sensory perception of sound

cellular component organization

Rho GTPase binding

actin cytoskeleton organization

ruffle membrane

cell projection

Focal adhesion

Regulation of actin cytoskeleton

237116_at -2.245 7.747 -8.205 5.702e-07 0.005 6.028 LOC646903 hypothetical LOC646903 3   AI262277 3q25.1 Hs.632559 1    
224323_s_at 1.035 5.975 7.415 1.990e-06 0.011 4.981 MRO maestro 18 -46575487, -46575487 AB042647 18q21 Hs.30495 6

binding

nucleus

nucleolus

 
213572_s_at -1.376 6.314 -7.389 2.075e-06 0.011 4.945 SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 6 -2778732 AI554300 6p25 Hs.381167 18

serine-type endopeptidase inhibitor activity

cytoplasm

peptidase inhibitor activity

 
201975_at -0.923 9.896 -7.386 2.086e-06 0.011 4.941 CLIP1 CAP-GLY domain containing linker protein 1 12 -121321933 NM_002956 12q24.3 Hs.524809 37

kinetochore

nucleic acid binding

protein binding

cytoplasm

endosome

microtubule

intermediate filament

mitosis

microtubule binding

zinc ion binding

protein homodimerization activity

metal ion binding

 
1557260_a_at 1.847 2.670 7.332 2.278e-06 0.011 4.866 ZNF382 zinc finger protein 382 19 41788060 BM973530 19q13.12 Hs.631591 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
214788_x_at -3.035 7.439 -7.269 2.529e-06 0.011 4.777 DDN dendrin 12 -47675199 AA731713 12q13.12 Hs.591044 5

nucleus

cytoplasm

endoplasmic reticulum

plasma membrane

dendrite

cell projection

perikaryon

 
228044_at 0.860 5.006 7.220 2.741e-06 0.011 4.708 SERP2 stress-associated endoplasmic reticulum protein family member 2 13 43845977 AI420319 13q14.11 Hs.377972 4

endoplasmic reticulum

protein transport

membrane

integral to membrane

intracellular protein transmembrane transport

 
211984_at -1.217 10.402 -7.200 2.835e-06 0.011 4.679 CALM1 calmodulin 1 (phosphorylase kinase, delta) 14 89933125 AI653730 14q24-q31 Hs.282410 Hs.708270 181  

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Glioma

200655_s_at -0.952 10.516 -7.180 2.929e-06 0.011 4.651 CALM1 calmodulin 1 (phosphorylase kinase, delta) 14 89933125 NM_006888 14q24-q31 Hs.282410 Hs.708270 181  

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Glioma

202763_at -1.272 5.490 -7.057 3.598e-06 0.012 4.474 CASP3 caspase 3, apoptosis-related cysteine peptidase 4 -185785843 NM_004346 4q34 Hs.141125 552

B cell homeostasis

release of cytochrome c from mitochondria

cysteine-type endopeptidase activity

cyclin-dependent protein kinase inhibitor activity

protein binding

nucleus

nucleoplasm

nucleolus

cytoplasm

mitochondrion

cytosol

cytosol

plasma membrane

DNA fragmentation involved in apoptosis

proteolysis

response to DNA damage stimulus

heart development

sensory perception of sound

peptidase activity

induction of apoptosis via death domain receptors

induction of apoptosis by oxidative stress

response to UV

response to wounding

keratinocyte differentiation

nuclear fragmentation during apoptosis

negative regulation of B cell proliferation

response to tumor necrosis factor

T cell homeostasis

negative regulation of apoptosis

cell fate commitment

negative regulation of cyclin-dependent protein kinase activity

negative regulation of activated T cell proliferation

neuron apoptosis

MAPK signaling pathway

p53 signaling pathway

Apoptosis

Natural killer cell mediated cytotoxicity

Alzheimer's disease

Parkinson's disease

Amyotrophic lateral sclerosis (ALS)

Huntington's disease

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Colorectal cancer

211985_s_at -1.313 10.126 -6.975 4.131e-06 0.012 4.355 CALM1 calmodulin 1 (phosphorylase kinase, delta) 14 89933125 AI653730 14q24-q31 Hs.282410 Hs.708270 181  

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Glioma

222990_at -0.759 9.423 -6.958 4.254e-06 0.012 4.330 UBQLN1 ubiquilin 1 9 -85464697 AW204104 9q21.2-q21.3 9q22 Hs.9589 46

nucleus

cytoplasm

cytosol

kinase binding

protein complex

perinuclear region of cytoplasm

 
202985_s_at -0.859 6.914 -6.883 4.828e-06 0.012 4.220 BAG5 BCL2-associated athanogene 5 14 -103092641, -103092641, -103092641 NM_004873 14q32.33 Hs.5443 10

protein binding

protein folding

apoptosis

 
228728_at 1.072 9.498 6.882 4.838e-06 0.012 4.219 C7orf58 chromosome 7 open reading frame 58 7 120415986, 120416680 BF724137 7q31.31 Hs.189652 13

endoplasmic reticulum

 
238592_at -3.092 8.949 -6.877 4.882e-06 0.012 4.211 PDLIM3 PDZ and LIM domain 3 4 -186659844 BE840636 4q35 Hs.85862 12

nucleus

nucleolus

cytoplasm

actin filament organization

heart development

cytoskeletal protein binding

zinc ion binding

structural constituent of muscle

actin cytoskeleton

Z disc

metal ion binding

 
222975_s_at -1.126 10.872 -6.840 5.197e-06 0.012 4.157 CSDE1 cold shock domain containing E1, RNA-binding 1 -115061060, -115061060, -115061059 AI423180 1p22 Hs.69855 25

DNA binding

RNA binding

protein binding

cytoplasm

regulation of transcription, DNA-dependent

male gonad development

 
210967_x_at -0.783 9.549 -6.820 5.380e-06 0.012 4.126 CACNB1 calcium channel, voltage-dependent, beta 1 subunit 17 -34586914, -34583234 M92301 17q21-q22 Hs.635 18

voltage-gated ion channel activity

voltage-gated calcium channel activity

calcium ion binding

plasma membrane

voltage-gated calcium channel complex

ion transport

calcium ion transport

MAPK signaling pathway

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

225337_at -0.814 6.878 -6.698 6.634e-06 0.014 3.944 ABHD2 abhydrolase domain containing 2 15 87432384 AI346910 15q26.1 Hs.122337 Hs.705984 10

molecular_function

carboxylesterase activity

biological_process

response to wounding

membrane

integral to membrane

hydrolase activity

negative regulation of cell migration

 
204044_at 1.394 5.567 6.658 7.116e-06 0.014 3.883 QPRT quinolinate phosphoribosyltransferase 16 29597941 NM_014298 16p11.2 Hs.513484 8

nicotinate-nucleotide diphosphorylase (carboxylating) activity

nicotinate-nucleotide diphosphorylase (carboxylating) activity

cellular_component

cytosol

metabolic process

NAD biosynthetic process

transferase activity, transferring glycosyl groups

pyridine nucleotide biosynthetic process

quinolinate catabolic process

protein homodimerization activity

protein oligomerization

Nicotinate and nicotinamide metabolism

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Metabolic pathways

223852_s_at -1.084 7.293 -6.638 7.365e-06 0.014 3.853 STK40 serine/threonine kinase 40 1 -36577811 BC005169 1p34.3 Hs.471768 11

nucleotide binding

protein serine/threonine kinase activity

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

transferase activity

 
209563_x_at -0.915 11.120 -6.636 7.384e-06 0.014 3.851 CALM1 calmodulin 1 (phosphorylase kinase, delta) 14 89933125 BC000454 14q24-q31 Hs.282410 Hs.708270 181  

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Glioma

239035_at 0.699 6.290 6.633 7.429e-06 0.014 3.846 MTHFR 5,10-methylenetetrahydrofolate reductase (NADPH) 1 -11768373 AL138431 1p36.3 Hs.214142 1776

methylenetetrahydrofolate reductase (NADPH) activity

methylenetetrahydrofolate reductase (NADPH) activity

protein binding

cytosol

cellular amino acid metabolic process

methionine metabolic process

blood circulation

oxidoreductase activity

oxidation reduction

One carbon pool by folate

Methane metabolism

Metabolic pathways

206996_x_at -0.760 9.524 -6.625 7.530e-06 0.014 3.834 CACNB1 calcium channel, voltage-dependent, beta 1 subunit 17 -34586914, -34583234 NM_000723 17q21-q22 Hs.635 18

voltage-gated ion channel activity

voltage-gated calcium channel activity

calcium ion binding

plasma membrane

voltage-gated calcium channel complex

ion transport

calcium ion transport

MAPK signaling pathway

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

235070_at -0.935 8.267 -6.553 8.532e-06 0.015 3.725 A2BP1 ataxin 2-binding protein 1 16 6009132, 6763810, 7322751 AL133898 16p13.3 Hs.459842 22

nucleotide binding

RNA binding

nucleus

cytoplasm

trans-Golgi network

mRNA processing

protein C-terminus binding

RNA splicing

RNA transport

 
217911_s_at -0.828 10.389 -6.470 9.878e-06 0.016 3.596 BAG3 BCL2-associated athanogene 3 10 121400871 NM_004281 10q25.2-q26.2 Hs.523309 37

protein binding

cellular_component

cytosol

protein folding

anti-apoptosis

 
219765_at 2.239 4.909 6.464 9.989e-06 0.016 3.586 ZNF329 zinc finger protein 329 19 -63329506 NM_024620 19q13.43 Hs.458377 2

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
225185_at -1.186 7.857 -6.452 1.019e-05 0.016 3.569 MRAS muscle RAS oncogene homolog 3 139549314, 139550197 BF343625 3q22.3 Hs.527021 18

nucleotide binding

GTPase activity

GTP binding

intracellular

plasma membrane

Ras protein signal transduction

multicellular organismal development

muscle organ development

actin cytoskeleton organization

GTP-dependent protein binding

MAPK signaling pathway

Tight junction

Regulation of actin cytoskeleton

224983_at -0.803 9.933 -6.439 1.043e-05 0.016 3.549 SCARB2 scavenger receptor class B, member 2 4 -77298917 BF339821 4q21.1 Hs.349656 Hs.714206 24

receptor activity

protein binding

membrane fraction

lysosome

integral to plasma membrane

cell adhesion

membrane

Lysosome

231968_at -0.914 7.931 -6.365 1.188e-05 0.018 3.434 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 128565223, 128565251 AK025416 2q14.3 Hs.598715 Hs.719174 10

UDP-glucose:glycoprotein glucosyltransferase activity

endoplasmic reticulum

endoplasmic reticulum lumen

ER-Golgi intermediate compartment

protein amino acid glycosylation

transferase activity, transferring glycosyl groups

unfolded protein binding

'de novo' posttranslational protein folding

 
208649_s_at -0.742 8.396 -6.328 1.270e-05 0.019 3.375 VCP valosin-containing protein 9 -35046064 AF100752 9p13.3 Hs.529782 97

nucleotide binding

ATP binding

nucleus

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

microsome

cytosol

double-strand break repair

transport

activation of caspase activity

response to DNA damage stimulus

lipid binding

protein ubiquitination

hydrolase activity

ATPase activity

protein domain specific binding

modification-dependent protein catabolic process

ER-associated protein catabolic process

endoplasmic reticulum unfolded protein response

retrograde protein transport, ER to cytosol

regulation of apoptosis

establishment of protein localization

 
223016_x_at -1.184 7.617 -6.318 1.293e-05 0.019 3.360 ZRANB2 zinc finger, RAN-binding domain containing 2 1 -71301561 AF065392 1p31 Hs.194718 18

transcription factor activity

RNA binding

protein binding

intracellular

nucleus

mRNA processing

zinc ion binding

RNA splicing

metal ion binding

 
227558_at 1.105 6.002 6.254 1.450e-05 0.020 3.258 CBX4 chromobox homolog 4 (Pc class homolog, Drosophila) 17 -75421549 AI570531 17q25.3 Hs.714363 25

chromatin

chromatin binding

transcription corepressor activity

nucleus

chromatin assembly or disassembly

anti-apoptosis

negative regulation of transcription

chromatin modification

enzyme binding

modification-dependent protein catabolic process

 
217963_s_at 1.474 8.334 6.205 1.583e-05 0.021 3.181 NGFRAP1 nerve growth factor receptor (TNFRSF16) associated protein 1 X 102517923, 102518764 NM_014380 Xq22.2 Hs.448588 Hs.719133 17

protein binding

nucleus

cytoplasm

apoptosis

multicellular organismal development

metal ion binding

Neurotrophin signaling pathway

202693_s_at -1.361 5.990 -6.184 1.643e-05 0.021 3.148 STK17A serine/threonine kinase 17a 7 43589216 AW194730 7p12-p14 Hs.709489 6

nucleotide binding

protein serine/threonine kinase activity

ATP binding

nucleus

protein amino acid phosphorylation

apoptosis

induction of apoptosis

protein kinase cascade

transferase activity

 
228555_at -0.965 6.532 -6.174 1.671e-05 0.021 3.133 CAMK2D calcium/calmodulin-dependent protein kinase II delta 4 -114597792, -114591638 AA029441 4q26 Hs.144114 29

G1/S transition of mitotic cell cycle

nucleotide binding

regulation of cell growth

calmodulin-dependent protein kinase activity

calmodulin binding

ATP binding

nucleus

cytoplasm

calcium- and calmodulin-dependent protein kinase complex

calcium ion transport

transferase activity

T-tubule

protein amino acid autophosphorylation

cardiac muscle contraction

ErbB signaling pathway

Calcium signaling pathway

Wnt signaling pathway

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

GnRH signaling pathway

Melanogenesis

Glioma

239084_at -0.803 4.907 -6.174 1.673e-05 0.021 3.132 SNAP29 synaptosomal-associated protein, 29kDa 22 19543291 BE896490 22q11.21 Hs.108002 Hs.701035 19

SNAP receptor activity

cytoplasm

plasma membrane

exocytosis

vesicle targeting

membrane fusion

protein transport

synaptosome

cell junction

synapse

SNARE interactions in vesicular transport

212678_at -0.725 5.639 -6.115 1.861e-05 0.022 3.037 NF1 neurofibromin 1 17 26446120, 26446120 AW054826 17q11.2 Hs.113577 204

osteoblast differentiation

metanephros development

response to hypoxia

liver development

negative regulation of endothelial cell proliferation

regulation of cell-matrix adhesion

Ras GTPase activator activity

protein binding

intracellular

nucleus

cytoplasm

signal transduction

Ras protein signal transduction

negative regulation of neuroblast proliferation

brain development

peripheral nervous system development

heart development

visual learning

phosphoinositide 3-kinase cascade

spinal cord development

forebrain astrocyte development

cerebral cortex development

myelination in the peripheral nervous system

actin cytoskeleton organization

collagen fibril organization

adrenal gland development

negative regulation of cell migration

axon

dendrite

positive regulation of Ras GTPase activity

wound healing

negative regulation of transcription factor import into nucleus

negative regulation of MAP kinase activity

negative regulation of MAPKKK cascade

pigmentation

positive regulation of neuron apoptosis

regulation of blood vessel endothelial cell migration

regulation of bone resorption

regulation of glial cell differentiation

positive regulation of adenylate cyclase activity

regulation of angiogenesis

sympathetic nervous system development

camera-type eye morphogenesis

negative regulation of oligodendrocyte differentiation

smooth muscle tissue development

artery morphogenesis

forebrain morphogenesis

cognition

regulation of small GTPase mediated signal transduction

MAPK signaling pathway

206209_s_at 0.852 6.436 6.107 1.888e-05 0.022 3.025 CA4 carbonic anhydrase IV 17 55582083 NM_000717 17q23 Hs.89485 30

carbonate dehydratase activity

membrane fraction

plasma membrane

one-carbon metabolic process

visual perception

zinc ion binding

lyase activity

anchored to membrane

metal ion binding

response to stimulus

Nitrogen metabolism

219073_s_at 1.772 4.964 6.106 1.891e-05 0.022 3.023 OSBPL10 oxysterol binding protein-like 10 3 -31677320 NM_017784 3p22.3 Hs.150122 7

lipid transport

steroid metabolic process

 
201724_s_at -0.766 6.968 -6.043 2.122e-05 0.023 2.921 GALNT1 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) 18 31488530 NM_020474 18q12.1 Hs.514806 26

polypeptide N-acetylgalactosaminyltransferase activity

calcium ion binding

sugar binding

extracellular region

Golgi apparatus

membrane

integral to membrane

transferase activity, transferring glycosyl groups

protein amino acid O-linked glycosylation via serine

protein amino acid O-linked glycosylation via threonine

manganese ion binding

perinuclear region of cytoplasm

O-Glycan biosynthesis

Metabolic pathways

202694_at -0.821 4.352 -6.037 2.142e-05 0.023 2.913 STK17A serine/threonine kinase 17a 7 43589216 AW183478 7p12-p14 Hs.709489 6

nucleotide binding

protein serine/threonine kinase activity

ATP binding

nucleus

protein amino acid phosphorylation

apoptosis

induction of apoptosis

protein kinase cascade

transferase activity

 
226648_at -0.987 6.811 -6.020 2.211e-05 0.023 2.885 HIF1AN hypoxia inducible factor 1, alpha subunit inhibitor 10 102285630 AI769745 10q24 Hs.500788 30

peptide-aspartate beta-dioxygenase activity

iron ion binding

protein binding

nucleus

oxidoreductase activity

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

regulation of transcription

metal ion binding

oxidation reduction

 
228332_s_at -0.579 9.953 -6.016 2.226e-05 0.023 2.878 C11orf31 chromosome 11 open reading frame 31 11 57265297 AA526939 11q12.1 Hs.655373 Hs.719147 6

selenium binding

cell redox homeostasis

 
224630_at -0.680 7.942 -6.006 2.266e-05 0.023 2.863 ERLEC1 endoplasmic reticulum lectin 1 2 53867571 AK001913 2p16.2 Hs.438336 Hs.713845 10

protein binding

endoplasmic reticulum

endoplasmic reticulum lumen

 
204992_s_at -1.296 10.321 -5.976 2.397e-05 0.023 2.813 PFN2 profilin 2 3 -151165380 NM_002628 3q25.1-q25.2 Hs.91747 24

actin binding

protein binding

phosphatidylinositol-4,5-bisphosphate binding

cytoplasm

regulation of actin polymerization or depolymerization

actin cytoskeleton

actin cytoskeleton organization

Regulation of actin cytoskeleton

202492_at -0.694 7.642 -5.966 2.439e-05 0.023 2.797 ATG9A ATG9 autophagy related 9 homolog A (S. cerevisiae) 2 -219792345 NM_024085 2q35 Hs.323363 10

autophagic vacuole formation

autophagy

protein transport

membrane

integral to membrane

cytoplasmic vesicle

 
243924_at 1.499 3.740 5.950 2.512e-05 0.023 2.771 LOC100127980 hypothetical protein LOC100127980 19   AA781404 19q13.12 Hs.595153 1    
1554292_a_at -0.601 3.121 -5.947 2.527e-05 0.023 2.766 UHRF1BP1L UHRF1 binding protein 1-like 12 -98987816, -98954993 BC014891 12q23.1 Hs.620701 2    
238613_at -1.034 9.818 -5.925 2.630e-05 0.023 2.730 ZAK sterile alpha motif and leucine zipper containing kinase AZK 2 173648810, 173648810 AI475164 2q24.2 Hs.444451 24

cell cycle checkpoint

DNA damage checkpoint

nucleotide binding

activation of MAPKK activity

magnesium ion binding

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

protein tyrosine kinase activity

ATP binding

nucleus

cytoplasm

response to stress

cell cycle

cell cycle arrest

protein kinase cascade

activation of JUN kinase activity

cell death

cell proliferation

response to radiation

transferase activity

cell differentiation

identical protein binding

positive regulation of apoptosis

MAPK signaling pathway

Tight junction

228153_at -1.100 9.778 -5.924 2.636e-05 0.023 2.728 RNF144B ring finger protein 144B 6 18495572 AI953847 6p22.3 Hs.148741 6

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

apoptosis

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

protein ubiquitination during ubiquitin-dependent protein catabolic process

metal ion binding

 
218178_s_at -1.250 8.778 -5.915 2.678e-05 0.023 2.714 CHMP1B chromatin modifying protein 1B 18 11841388 NM_020412 18p11.21 Hs.656244 16

cytoplasm

endosome

cytosol

cell cycle

protein transport

membrane

protein domain specific binding

cell division

Endocytosis

200758_s_at -0.882 11.205 -5.853 3.005e-05 0.025 2.611 NFE2L1 nuclear factor (erythroid-derived 2)-like 1 17 43480684 AI361227 17q21.3 Hs.514284 20

transcription factor activity

transcription cofactor activity

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

heme biosynthetic process

inflammatory response

anatomical structure morphogenesis

sequence-specific DNA binding

protein dimerization activity

 
225894_at -1.030 11.477 -5.852 3.010e-05 0.025 2.610 SYNPO2 synaptopodin 2 4 120029443, 120029443 AL589603 4q26 Hs.655519 14

actin binding

protein binding

nucleus

cytoplasm

 
214657_s_at -1.212 5.063 -5.843 3.058e-05 0.025 2.596 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 11 64946844, 64946844 AU134977 11q13.1 Hs.523789 Hs.648467 6    
224324_at 0.823 5.004 5.839 3.083e-05 0.025 2.588 MRO maestro 18 -46575487, -46575487 AB042647 18q21 Hs.30495 6

binding

nucleus

nucleolus

 
225999_at -1.125 5.149 -5.806 3.274e-05 0.026 2.535 RIMKLB ribosomal modification protein rimK-like family member B 12 8741784 AI743612 12p13.31 Hs.504670 4

nucleotide binding

catalytic activity

ATP binding

protein modification process

manganese ion binding

metal ion binding

 
204067_at 0.719 7.561 5.797 3.329e-05 0.026 2.520 SUOX sulfite oxidase 12 54677309 AA129776 12q13.2 Hs.558403 23

mitochondrion

mitochondrial intermembrane space

cytosol

response to nutrient

sulfite oxidase activity

electron carrier activity

oxidoreductase activity

heme binding

molybdenum ion binding

molybdopterin cofactor binding

metal ion binding

oxidation reduction

Sulfur metabolism

214643_x_at -0.915 9.148 -5.789 3.382e-05 0.026 2.506 BIN1 bridging integrator 1 2 -127522077, -127522076 BG034080 2q14 Hs.193163 69

protein binding

nucleus

cytoplasm

multicellular organismal development

cell proliferation

actin cytoskeleton

regulation of endocytosis

cell differentiation

interspecies interaction between organisms

 
200789_at 0.897 10.678 5.771 3.492e-05 0.026 2.477 ECH1 enoyl Coenzyme A hydratase 1, peroxisomal 19 -43997901 NM_001398 19q13.1 Hs.196176 9

enoyl-CoA hydratase activity

protein binding

mitochondrion

peroxisome

generation of precursor metabolites and energy

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

metabolic process

isomerase activity

Tyrosine metabolism

218858_at -1.393 9.627 -5.759 3.575e-05 0.026 2.456 DEPDC6 DEP domain containing 6 8 120955080 NM_022783 8q24.12 Hs.112981 11

protein binding

intracellular

negative regulation of protein kinase activity

intracellular signaling cascade

negative regulation of TOR signaling pathway

regulation of apoptosis

negative regulation of cell size

 
232183_at -0.803 6.202 -5.756 3.590e-05 0.026 2.452 SERAC1 serine active site containing 1 6 -158450523 AA128978 6q25.3 Hs.154706 6

binding

membrane

integral to membrane

 
229160_at -1.576 7.231 -5.756 3.596e-05 0.026 2.451 MUM1L1 melanoma associated antigen (mutated) 1-like 1 X 105307974 AI967987 Xq22.3 Hs.592221 5    
202204_s_at -0.830 7.366 -5.748 3.644e-05 0.026 2.439 AMFR autocrine motility factor receptor 16 -54952864 AF124145 16q21 Hs.295137 33

protein polyubiquitination

integral to membrane of membrane fraction

ubiquitin-protein ligase activity

ubiquitin-protein ligase activity

receptor activity

receptor activity

protein binding

endoplasmic reticulum

ubiquitin-dependent protein catabolic process

cell motion

signal transduction

zinc ion binding

membrane

integral to membrane

integral to membrane

ligase activity

integral to endoplasmic reticulum membrane

ER-associated protein catabolic process

ER-associated protein catabolic process

endoplasmic reticulum unfolded protein response

metal ion binding

protein oligomerization

 
209029_at -0.770 7.786 -5.743 3.681e-05 0.026 2.430 COPS7A COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis) 12 6703410, 6703440, 6703505, 6703709 AF193844 12p13.31 Hs.530823 16

nucleus

cytoplasm

signalosome

 
220183_s_at 0.990 6.738 5.716 3.868e-05 0.026 2.386 NUDT6 nudix (nucleoside diphosphate linked moiety X)-type motif 6 4 -124033248, -124033248 NM_007083 4q26 Hs.558459 15

cellular_component

growth factor activity

biological_process

hydrolase activity

 
204270_at 0.622 6.165 5.703 3.969e-05 0.026 2.362 SKI v-ski sarcoma viral oncogene homolog (avian) 1 2149993 AI568728 1q22-q24 Hs.663133 54

nucleotide binding

protein binding

nucleus

nucleoplasm

cell differentiation

BMP signaling pathway

 
220703_at 2.137 7.471 5.692 4.047e-05 0.026 2.345 C10orf110 chromosome 10 open reading frame 110 10 1058576 NM_018470 10p15.3 Hs.644603 2    
226066_at -0.873 8.536 -5.681 4.130e-05 0.027 2.327 MITF microphthalmia-associated transcription factor 3 69871322, 69895651, 69998131, 70010945, 70068442 AL117653 3p14.2-p14.1 Hs.166017 Hs.618266 93

DNA binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

transcription activator activity

transcription activator activity

melanocyte differentiation

Melanogenesis

Pathways in cancer

Melanoma

222569_at -1.301 6.279 -5.653 4.354e-05 0.027 2.279 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 128565223, 128565251 AU153746 2q14.3 Hs.598715 Hs.719174 10

UDP-glucose:glycoprotein glucosyltransferase activity

endoplasmic reticulum

endoplasmic reticulum lumen

ER-Golgi intermediate compartment

protein amino acid glycosylation

transferase activity, transferring glycosyl groups

unfolded protein binding

'de novo' posttranslational protein folding

 
225192_at -0.860 7.570 -5.645 4.420e-05 0.027 2.266 C10orf46 chromosome 10 open reading frame 46 10 -120430483 AA044726 10q26.11 Hs.719193 4

ubiquitin-dependent protein catabolic process

cullin-RING ubiquitin ligase complex

ubiquitin protein ligase binding

 
222154_s_at -1.070 9.172 -5.614 4.683e-05 0.028 2.214 SPATS2L spermatogenesis associated, serine-rich 2-like 2 200878848, 200879229, 200879600 AK002064 2q33.1 Hs.120323 9    
240453_at -1.009 3.262 -5.611 4.710e-05 0.028 2.209 C20orf26 chromosome 20 open reading frame 26 20 19981195 AA418538 20p11.23 Hs.176013 6    
227337_at -1.598 7.241 -5.610 4.718e-05 0.028 2.207 ANKRD37 ankyrin repeat domain 37 4 186554833 AA886870 4q35.1 Hs.508154 4

nucleus

cytoplasm

 
224281_s_at -0.640 9.795 -5.601 4.801e-05 0.028 2.192 NGRN neugrin, neurite outgrowth associated 15 88609898 AF225423 15q26.1 Hs.715556 Hs.716378 2

molecular_function

nucleus

multicellular organismal development

nervous system development

neuron differentiation

 
226280_at -0.717 8.481 -5.601 4.803e-05 0.028 2.191 BNIP2 BCL2/adenovirus E1B 19kDa interacting protein 2 15 -57742353 AA133277 15q22.2 Hs.646490 15

GTPase activator activity

calcium ion binding

protein binding

nuclear envelope

cytoplasm

apoptosis

anti-apoptosis

intracellular membrane-bounded organelle

perinuclear region of cytoplasm

 
223805_at -1.090 8.468 -5.580 4.990e-05 0.028 2.157 OSBPL6 oxysterol binding protein-like 6 2 178767619, 178893216 AF323728 2q31-q32.1 Hs.318775 7

lipid transport

steroid metabolic process

 
224709_s_at -0.770 6.971 -5.573 5.063e-05 0.029 2.144 CDC42SE2 CDC42 small effector 2 5 130627600 AF131831 5q23.3-q31.1 Hs.508829 Hs.713870 8

structural molecule activity

protein binding

cytoplasm

cytoskeleton

plasma membrane

phagocytosis

regulation of cell shape

regulation of signal transduction

 
242274_x_at 0.993 4.133 5.563 5.156e-05 0.029 2.128 SLC25A42 solute carrier family 25, member 42 19 19035807 AI057363 19p13.11 Hs.303669 3

binding

mitochondrion

mitochondrial inner membrane

transport

membrane

integral to membrane

 
203580_s_at -0.880 8.015 -5.548 5.299e-05 0.029 2.103 SLC7A6 solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 16 66855923 NM_003983 16q22.1 Hs.653193 Hs.709557 6

plasma membrane

integral to plasma membrane

protein complex assembly

cellular amino acid metabolic process

transport

amino acid transport

amino acid transmembrane transporter activity

antiporter activity

 
217820_s_at -1.286 8.103 -5.543 5.352e-05 0.029 2.094 ENAH enabled homolog (Drosophila) 1 -223741156 NM_018212 1q42.12 Hs.497893 37

actin binding

cytoplasm

cytoskeleton

focal adhesion

SH3 domain binding

lamellipodium

cell junction

filopodium

synapse

intracellular transport

WW domain binding

Regulation of actin cytoskeleton

205311_at 1.072 4.213 5.513 5.662e-05 0.031 2.043 DDC dopa decarboxylase (aromatic L-amino acid decarboxylase) 7 -50493627, -50493627 NM_000790 7p12.2 Hs.359698 48

aromatic-L-amino-acid decarboxylase activity

protein binding

cellular amino acid and derivative metabolic process

response to toxin

lyase activity

carboxylic acid metabolic process

pyridoxal phosphate binding

catecholamine biosynthetic process

Histidine metabolism

Tyrosine metabolism

Phenylalanine metabolism

Tryptophan metabolism

Isoquinoline alkaloid biosynthesis

Betalain biosynthesis

Biosynthesis of alkaloids derived from shikimate pathway

Metabolic pathways

221027_s_at 1.127 8.404 5.509 5.707e-05 0.031 2.036 PLA2G12A phospholipase A2, group XIIA 4 -110850594 NM_030821 4q25 Hs.389452 10

calcium ion binding

extracellular region

intracellular

cytoplasm

endoplasmic reticulum

Golgi apparatus

phospholipid metabolic process

biological_process

lipid catabolic process

hydrolase activity

calcium-dependent phospholipase A2 activity

Glycerophospholipid metabolism

Ether lipid metabolism

Arachidonic acid metabolism

Linoleic acid metabolism

alpha-Linolenic acid metabolism

Metabolic pathways

MAPK signaling pathway

Vascular smooth muscle contraction

VEGF signaling pathway

Fc epsilon RI signaling pathway

Long-term depression

GnRH signaling pathway

201471_s_at -0.722 9.615 -5.494 5.878e-05 0.031 2.010 SQSTM1 sequestosome 1 5 179165993, 179166608, 179180447 NM_003900 5q35 Hs.437277 100

protein kinase C binding

protein binding

nucleus

cytoplasm

late endosome

cytosol

cytosol

ubiquitin-dependent protein catabolic process

apoptosis

response to stress

immune response

intracellular signaling cascade

protein localization

zinc ion binding

endosome transport

cell differentiation

receptor tyrosine kinase binding

SH2 domain binding

SH2 domain binding

regulation of I-kappaB kinase/NF-kappaB cascade

regulation of I-kappaB kinase/NF-kappaB cascade

ubiquitin binding

ubiquitin binding

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

 
1553177_at -2.274 6.108 -5.492 5.896e-05 0.031 2.007 SH2D1B SH2 domain containing 1B 1 -160631679 BC022407 1q23.3 Hs.350581 10

molecular_function

protein binding

cellular_component

biological_process

Natural killer cell mediated cytotoxicity

214439_x_at -0.903 10.906 -5.458 6.286e-05 0.032 1.949 BIN1 bridging integrator 1 2 -127522077, -127522076 AF043899 2q14 Hs.193163 69

protein binding

nucleus

cytoplasm

multicellular organismal development

cell proliferation

actin cytoskeleton

regulation of endocytosis

cell differentiation

interspecies interaction between organisms

 
212566_at -0.754 10.545 -5.458 6.292e-05 0.032 1.948 MAP4 microtubule-associated protein 4 3 -47989573, -47867183, -47867183 AL523310 3p21 Hs.517949 40

structural molecule activity

protein binding

microtubule

microtubule associated complex

negative regulation of microtubule depolymerization

 
59625_at -0.539 7.889 -5.436 6.553e-05 0.033 1.912 NOL3 nucleolar protein 3 (apoptosis repressor with CARD domain) 16 65765370 AI912351 16q21-q23 Hs.513667 22

RNA binding

intracellular

nucleus

nucleolus

cytoplasm

cytosol

mRNA processing

anti-apoptosis

RNA splicing

identical protein binding

regulation of apoptosis

 
218211_s_at 0.981 7.239 5.436 6.560e-05 0.033 1.911 MLPH melanophilin 2 238060616 NM_024101 2q37.3 Hs.102406 23

protein binding

cytoplasm

intracellular protein transport

zinc ion binding

Rab GTPase binding

metal ion binding

 
223680_at 0.621 3.733 5.434 6.575e-05 0.033 1.909 ZNF607 zinc finger protein 607 19 -42879115 BC005085 19q13.1 Hs.116622 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
204309_at 0.670 4.458 5.428 6.656e-05 0.033 1.898 CYP11A1 cytochrome P450, family 11, subfamily A, polypeptide 1 15 -72417155, -72417155 NM_000781 15q23-q24 Hs.303980 88

monooxygenase activity

mitochondrion

lipid metabolic process

C21-steroid hormone biosynthetic process

cholesterol metabolic process

cholesterol metabolic process

cholesterol monooxygenase (side-chain-cleaving) activity

cholesterol monooxygenase (side-chain-cleaving) activity

electron carrier activity

membrane

heme binding

mitochondrial membrane

vitamin D metabolic process

metal ion binding

oxidation reduction

C21-Steroid hormone metabolism

Metabolic pathways

225243_s_at -1.239 8.469 -5.424 6.708e-05 0.033 1.891 SLMAP sarcolemma associated protein 3 57718213 AB046821 3p21.2-p14.3 Hs.476432 11

smooth endoplasmic reticulum

plasma membrane

integral to plasma membrane

protein folding

muscle contraction

prefoldin complex

unfolded protein binding

 
214033_at -0.870 5.924 -5.415 6.826e-05 0.033 1.875 ABCC6 ATP-binding cassette, sub-family C (CFTR/MRP), member 6 16 -16222544, -16150922 AI084637 16p13.1 Hs.442182 70

nucleotide binding

transporter activity

ATP binding

plasma membrane

transport

visual perception

integral to membrane

ATPase activity

response to drug

ATPase activity, coupled to transmembrane movement of substances

response to stimulus

ABC transporters

201462_at 0.989 4.520 5.414 6.829e-05 0.033 1.874 SCRN1 secernin 1 7 -29926244, -29926244, -29926244 NM_014766 7p14.3-p14.1 Hs.520740 11

molecular_function

nucleus

cytoplasm

exocytosis

nuclear membrane

 
222478_at -0.771 7.940 -5.399 7.028e-05 0.033 1.849 VPS36 vacuolar protein sorting 36 homolog (S. cerevisiae) 13 -51884737 AL576924 13q14.3 Hs.109520 11

nucleus

cytoplasm

lysosome

late endosome

lipid binding

protein transport

ubiquitin binding

regulation of transcription

Endocytosis

211654_x_at 0.807 6.355 5.395 7.092e-05 0.033 1.840 HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 6 -32735634 M17565 6p21.3 Hs.409934 Hs.534322 Hs.713773 998

antigen processing and presentation of peptide or polysaccharide antigen via MHC class II

plasma membrane

immune response

immune response

membrane

membrane

integral to membrane

MHC class II receptor activity

MHC class II protein complex

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

1556114_a_at -1.072 9.046 -5.392 7.122e-05 0.033 1.837 DKFZp451A211 DKFZp451A211 protein 13   BC036906 13q34 Hs.646609 1    
225817_at 0.753 4.119 5.385 7.229e-05 0.033 1.823 CGNL1 cingulin-like 1 15 55455996 AB051536 15q21.3 Hs.148989 6

motor activity

tight junction

myosin complex

cell junction

 
221959_at -0.694 5.923 -5.374 7.380e-05 0.033 1.804 FAM110B family with sequence similarity 110, member B 8 59069666 BE672313 8q12.1 Hs.154652 7

cytoplasm

mitochondrion

centrosome

 
212539_at -0.810 7.260 -5.374 7.381e-05 0.033 1.804 CHD1L chromodomain helicase DNA binding protein 1-like 1 145180914 AI422099 1q12 Hs.191164 12

nucleotide binding

DNA binding

helicase activity

ATP binding

nucleus

ATP-dependent helicase activity

hydrolase activity

 
221511_x_at -0.738 7.859 -5.369 7.445e-05 0.033 1.797 CCPG1 cell cycle progression 1 15 -53434729, -53434729 AB033080 15q21.1 Hs.285051 5

cell cycle

membrane

integral to membrane

 
212610_at -0.936 10.103 -5.354 7.660e-05 0.034 1.771 PTPN11 protein tyrosine phosphatase, non-receptor type 11 12 111340918 U79291 12q24 Hs.506852 Hs.646231 326

non-membrane spanning protein tyrosine phosphatase activity

non-membrane spanning protein tyrosine phosphatase activity

protein binding

cytoplasm

cytosol

protein amino acid dephosphorylation

signal transduction

hydrolase activity

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Adipocytokine signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

Renal cell carcinoma

Chronic myeloid leukemia

226982_at -1.237 5.535 -5.352 7.696e-05 0.034 1.767 ELL2 elongation factor, RNA polymerase II, 2 5 -95246557 AI745624 5q15 Hs.192221 Hs.708710 6

RNA polymerase II transcription factor activity

nucleus

RNA elongation from RNA polymerase II promoter

transcription elongation factor complex

RNA polymerase II transcription elongation factor activity

regulation of transcription

 
204285_s_at -1.309 4.893 -5.337 7.922e-05 0.034 1.740 PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 18 55718171 AI857639 18q21.32 Hs.96 36

release of cytochrome c from mitochondria

protein binding

mitochondrion

induction of apoptosis

activation of caspase activity

cell structure disassembly during apoptosis

virus-infected cell apoptosis

response to dsRNA

p53 signaling pathway

238575_at -0.979 7.166 -5.330 8.021e-05 0.034 1.729 OSBPL6 oxysterol binding protein-like 6 2 178767619, 178893216 AI094626 2q31-q32.1 Hs.318775 7

lipid transport

steroid metabolic process

 
210202_s_at -1.109 10.258 -5.322 8.140e-05 0.034 1.716 BIN1 bridging integrator 1 2 -127522077, -127522076 U87558 2q14 Hs.193163 69

protein binding

nucleus

cytoplasm

multicellular organismal development

cell proliferation

actin cytoskeleton

regulation of endocytosis

cell differentiation

interspecies interaction between organisms

 
200653_s_at -0.811 10.801 -5.322 8.145e-05 0.034 1.715 CALM1 calmodulin 1 (phosphorylase kinase, delta) 14 89933125 M27319 14q24-q31 Hs.282410 Hs.708270 181  

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Glioma

217759_at -0.497 6.964 -5.319 8.190e-05 0.034 1.710 TRIM44 tripartite motif-containing 44 11 35640928 BF431488 11p13 Hs.192103 10

intracellular

zinc ion binding

metal ion binding

 
200836_s_at -0.868 8.420 -5.307 8.391e-05 0.035 1.688 MAP4 microtubule-associated protein 4 3 -47989573, -47867183, -47867183 NM_002375 3p21 Hs.517949 40

structural molecule activity

protein binding

microtubule

microtubule associated complex

negative regulation of microtubule depolymerization

 
225721_at -1.457 8.704 -5.303 8.445e-05 0.035 1.683 SYNPO2 synaptopodin 2 4 120029443, 120029443 AI658662 4q26 Hs.655519 14

actin binding

protein binding

nucleus

cytoplasm

 
218364_at -1.021 8.099 -5.303 8.448e-05 0.035 1.682 LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 3 -37069120 NM_017724 3p22.2 Hs.719246 7

protein binding

cellular_component

biological_process

Wnt receptor signaling pathway

LRR domain binding

 
212666_at -0.853 5.449 -5.295 8.575e-05 0.035 1.669 SMURF1 SMAD specific E3 ubiquitin protein ligase 1 7 -98462999 AB046845 7q22.1 Hs.189329 34

ubiquitin-protein ligase activity

protein binding

intracellular

cytoplasm

plasma membrane

protein modification process

protein export from nucleus

ectoderm development

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

cell differentiation

negative regulation of ossification

negative regulation of BMP signaling pathway

ubiquitin-dependent SMAD protein catabolic process

positive regulation of protein ubiquitination

receptor catabolic process

protein localization at cell surface

protein ubiquitination during ubiquitin-dependent protein catabolic process

proteasomal ubiquitin-dependent protein catabolic process

activin binding

I-SMAD binding

R-SMAD binding

Ubiquitin mediated proteolysis

Endocytosis

TGF-beta signaling pathway

212168_at -0.737 5.686 -5.292 8.627e-05 0.035 1.663 RBM12 RNA binding motif protein 12 20 -33700292 AL514547 20q11.21 Hs.246413 13

nucleotide binding

RNA binding

protein binding

nucleus

 
209075_s_at -0.686 11.329 -5.285 8.746e-05 0.035 1.651 ISCU iron-sulfur cluster scaffold homolog (E. coli) 12 107480423 AY009128 12q24.1 Hs.615131 14

iron ion binding

nucleus

cytoplasm

mitochondrion

cytosol

nitrogen fixation

iron-sulfur cluster assembly

protein complex scaffold

metal ion binding

iron-sulfur cluster binding

 
200721_s_at -0.668 7.848 -5.282 8.800e-05 0.035 1.645 ACTR1A ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) 10 -104228976 NM_005736 10q24.32 Hs.153961 26

nucleotide binding

protein binding

ATP binding

cytoplasm

centrosome

cytoskeleton

dynactin complex

vesicle-mediated transport

 
210716_s_at -1.379 7.410 -5.281 8.820e-05 0.035 1.643 CLIP1 CAP-GLY domain containing linker protein 1 12 -121321933 M97501 12q24.3 Hs.524809 37

kinetochore

nucleic acid binding

protein binding

cytoplasm

endosome

microtubule

intermediate filament

mitosis

microtubule binding

zinc ion binding

protein homodimerization activity

metal ion binding

 
206030_at 1.019 8.060 5.276 8.895e-05 0.035 1.636 ASPA aspartoacylase (Canavan disease) 17 3324153, 3326045 NM_000049 17pter-p13 Hs.171142 27

aminoacylase activity

nucleus

cytoplasm

aspartate catabolic process

metabolic process

zinc ion binding

hydrolase activity, acting on ester bonds

aspartoacylase activity

metal ion binding

Alanine, aspartate and glutamate metabolism

Histidine metabolism

224558_s_at -1.231 9.293 -5.270 9.009e-05 0.035 1.624 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 11 65021808 AI446756 11q13.1 Hs.642877 Hs.714394 8    
242287_at -1.258 6.343 -5.259 9.194e-05 0.035 1.606 CLIP1 CAP-GLY domain containing linker protein 1 12 -121321933 AI090487 12q24.3 Hs.524809 37

kinetochore

nucleic acid binding

protein binding

cytoplasm

endosome

microtubule

intermediate filament

mitosis

microtubule binding

zinc ion binding

protein homodimerization activity

metal ion binding

 
244552_at 0.494 3.580 5.256 9.251e-05 0.035 1.600 ZNF788 zinc finger family member 788 19 12064077 AI190287 19p13.2 Hs.127473  

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
1556121_at -1.360 6.152 -5.251 9.335e-05 0.035 1.592 NAP1L1 nucleosome assembly protein 1-like 1 12 -74724938 AK021751 12q21.2 Hs.524599 Hs.695185 17

protein binding

nucleus

chromatin assembly complex

DNA replication

nucleosome assembly

positive regulation of cell proliferation

melanosome

 
221931_s_at -0.877 8.078 -5.249 9.367e-05 0.035 1.589 SEH1L SEH1-like (S. cerevisiae) 18 12937982 AV701173 18p11.21 Hs.301048 9

kinetochore

nucleus

nuclear pore organization

mitotic metaphase plate congression

protein transport

Nup107-160 complex

Nup107-160 complex

mRNA transport

attachment of spindle microtubules to kinetochore during mitosis

intracellular protein transmembrane transport

 
1565254_s_at -0.464 4.196 -5.247 9.405e-05 0.035 1.585 ELL elongation factor RNA polymerase II 19 -18414473 AF272374 19p13.1 Hs.515260 26

protein binding

nucleus

nucleoplasm

RNA elongation from RNA polymerase II promoter

transcription elongation factor complex

positive transcription elongation factor activity

Cajal body

nuclear speck

RNA polymerase II transcription elongation factor activity

regulation of transcription

 
212567_s_at -0.729 8.340 -5.247 9.411e-05 0.035 1.585 MAP4 microtubule-associated protein 4 3 -47989573, -47867183, -47867183 AL523310 3p21 Hs.517949 40

structural molecule activity

protein binding

microtubule

microtubule associated complex

negative regulation of microtubule depolymerization

 
207757_at 0.846 4.480 5.237 9.590e-05 0.036 1.568 ZFP2 zinc finger protein 2 homolog (mouse) 5 178255521 NM_030613 5q35.3 Hs.654533 1

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
224339_s_at -1.351 6.257 -5.227 9.786e-05 0.036 1.549 ANGPTL1 angiopoietin-like 1 1 -177085292 AB056476 1q25.2 Hs.591474 19

receptor binding

extracellular region

extracellular space

signal transduction

 
231569_at 0.610 3.402 5.218 9.942e-05 0.036 1.535 TMEM31 transmembrane protein 31 X 102852492 N58489 Xq22.2 Hs.98843 1

membrane

integral to membrane

 
202222_s_at -0.680 11.468 -5.212 1.006e-04 0.036 1.525 DES desmin 2 219991342 NM_001927 2q35 Hs.594952 57

structural constituent of cytoskeleton

protein binding

intracellular

insoluble fraction

cytoplasm

cytoskeleton

muscle contraction

cytoskeleton organization

regulation of heart contraction

Z disc

sarcolemma

contractile fiber

type III intermediate filament

synapse

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

209287_s_at -0.637 6.135 -5.186 1.059e-04 0.038 1.478 CDC42EP3 CDC42 effector protein (Rho GTPase binding) 3 2 -37724246 AF104857 2p21 Hs.369574 17

protein binding

cytoskeletal regulatory protein binding

cytoplasm

signal transduction

regulation of cell shape

actin cytoskeleton

membrane

 
222434_at -1.249 5.829 -5.185 1.060e-04 0.038 1.477 ENAH enabled homolog (Drosophila) 1 -223741156 AI963713 1q42.12 Hs.497893 37

actin binding

cytoplasm

cytoskeleton

focal adhesion

SH3 domain binding

lamellipodium

cell junction

filopodium

synapse

intracellular transport

WW domain binding

Regulation of actin cytoskeleton

214999_s_at -1.058 4.533 -5.164 1.105e-04 0.039 1.439 RAB11FIP3 RAB11 family interacting protein 3 (class II) 16 415668, 464850 AW243089 16p13.3 Hs.531642 18

calcium ion binding

protein binding

protein transport

membrane

Rab GTPase binding

recycling endosome

Endocytosis

202931_x_at -0.849 10.850 -5.163 1.106e-04 0.039 1.438 BIN1 bridging integrator 1 2 -127522077, -127522076 NM_004305 2q14 Hs.193163 69

protein binding

nucleus

cytoplasm

multicellular organismal development

cell proliferation

actin cytoskeleton

regulation of endocytosis

cell differentiation

interspecies interaction between organisms

 
200759_x_at -0.787 11.280 -5.162 1.108e-04 0.039 1.437 NFE2L1 nuclear factor (erythroid-derived 2)-like 1 17 43480684 NM_003204 17q21.3 Hs.514284 20

transcription factor activity

transcription cofactor activity

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

heme biosynthetic process

inflammatory response

anatomical structure morphogenesis

sequence-specific DNA binding

protein dimerization activity

 
224928_at -0.867 9.894 -5.158 1.118e-04 0.039 1.429 SETD7 SET domain containing (lysine methyltransferase) 7 4 -140646641 AK024846 4q28 Hs.480792 21

protein binding

nucleus

chromosome

regulation of transcription, DNA-dependent

methyltransferase activity

chromatin modification

transferase activity

histone-lysine N-methyltransferase activity

histone-lysine N-methyltransferase activity

Lysine degradation

218676_s_at -0.731 6.714 -5.156 1.121e-04 0.039 1.426 PCTP phosphatidylcholine transfer protein 17 51183354 NM_021213 17q21-q24 Hs.285218 9

cytoplasm

cytosol

cytosol

lipid binding

phosphatidylcholine transmembrane transporter activity

phosphatidylcholine transmembrane transporter activity

phospholipid transport

phosphatidylcholine binding

 
213844_at 0.743 6.527 5.156 1.122e-04 0.039 1.425 HOXA5 homeobox A5 7 -27147520 NM_019102 7p15-p14 Hs.655218 32

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

pattern specification process

anterior/posterior pattern formation

lung development

thyroid gland development

multicellular organism growth

sequence-specific DNA binding

embryonic skeletal system morphogenesis

 
227321_at -1.388 7.016 -5.153 1.129e-04 0.039 1.420 GATS GATS, stromal antigen 3 opposite strand 7 -99644496, -99636215 D52585 7q22.1 Hs.556063 Hs.718406 4    
223960_s_at -0.679 6.790 -5.141 1.154e-04 0.039 1.400 C16orf5 chromosome 16 open reading frame 5 16 -4500677 AF195661 16p13.3 Hs.654653 6

molecular_function

nucleus

apoptosis

induction of apoptosis

biological_process

tumor necrosis factor-mediated signaling pathway

DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis

 
204976_s_at -0.684 5.380 -5.138 1.162e-04 0.039 1.394 AMMECR1 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 X -109324069 AK023637 Xq22.3 Hs.656243 7

molecular_function

cellular_component

biological_process

 
210201_x_at -0.859 10.934 -5.137 1.165e-04 0.039 1.392 BIN1 bridging integrator 1 2 -127522077, -127522076 AF001383 2q14 Hs.193163 69

protein binding

nucleus

cytoplasm

multicellular organismal development

cell proliferation

actin cytoskeleton

regulation of endocytosis

cell differentiation

interspecies interaction between organisms

 
229012_at 0.737 5.291 5.132 1.174e-04 0.039 1.384 C9orf24 chromosome 9 open reading frame 24 9 -34369016, -34369016 AW269443 9p13.3 Hs.50334 8    
209448_at -1.087 6.969 -5.131 1.178e-04 0.039 1.381 HTATIP2 HIV-1 Tat interactive protein 2, 30kDa 11 20341806, 20341822, 20341864, 20341978, 20342262 BC002439 11p15.1 Hs.90753 31

RNA polymerase II transcription factor activity

transcription coactivator activity

protein binding

nucleus

nuclear envelope

cytoplasm

regulation of transcription from RNA polymerase II promoter

anti-apoptosis

induction of apoptosis

multicellular organismal development

oxidoreductase activity

cell differentiation

regulation of apoptosis

interspecies interaction between organisms

regulation of angiogenesis

nuclear import

oxidation reduction

 
201538_s_at -0.947 7.274 -5.128 1.184e-04 0.039 1.376 DUSP3 dual specificity phosphatase 3 17 -39199014 NM_004090 17q21 Hs.181046 21

protein tyrosine phosphatase activity

protein tyrosine phosphatase activity

nucleoplasm

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

MAPK signaling pathway

221232_s_at -3.531 9.431 -5.122 1.199e-04 0.039 1.365 ANKRD2 ankyrin repeat domain 2 (stretch responsive muscle) 10 99322245 NM_020349 10q23.31-q23.32 Hs.73708 17

muscle organ development

structural constituent of muscle

I band

 
1553971_a_at -1.573 6.969 -5.116 1.211e-04 0.039 1.356 GATS GATS, stromal antigen 3 opposite strand 7 -99644496, -99636215 AL831967 7q22.1 Hs.556063 Hs.718406 4    
224677_x_at -0.583 8.682 -5.098 1.255e-04 0.039 1.324 C11orf31 chromosome 11 open reading frame 31 11 57265297 AV729234 11q12.1 Hs.655373 Hs.719147 6

selenium binding

cell redox homeostasis

 
201832_s_at -0.817 9.929 -5.096 1.259e-04 0.039 1.321 USO1 USO1 homolog, vesicle docking protein (yeast) 4 76868852 NM_003715 4q21.1 Hs.292689 34

Golgi membrane

protein binding

cytoplasm

microsome

Golgi apparatus

cytosol

intracellular protein transport

protein transporter activity

membrane

vesicle-mediated transport

vesicle fusion with Golgi apparatus

perinuclear region of cytoplasm

 
225057_at -0.950 7.770 -5.096 1.261e-04 0.039 1.320 SLC15A4 solute carrier family 15, member 4 12 -127843692 AI636759 12q24.32-q24.33 Hs.507260 Hs.699387 6

transporter activity

oligopeptide transport

protein transport

symporter activity

membrane

integral to membrane

 
201375_s_at -0.674 10.090 -5.094 1.265e-04 0.039 1.317 PPP2CB protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform 8 -30762667 NM_004156 8p12 Hs.491440 40

protein phosphatase type 2A complex

chromosome, centromeric region

protein serine/threonine phosphatase activity

iron ion binding

protein binding

nucleus

cytoplasm

spindle

protein amino acid dephosphorylation

regulation of gene expression

hydrolase activity

manganese ion binding

response to hydrogen peroxide

negative regulation of apoptosis

proteasomal ubiquitin-dependent protein catabolic process

response to antibiotic

metal ion binding

Wnt signaling pathway

TGF-beta signaling pathway

Tight junction

Long-term depression

223192_at 0.596 8.030 5.093 1.266e-04 0.039 1.316 SLC25A28 solute carrier family 25, member 28 10 -101360264 AF267854 10q23-q24 Hs.403790 6

binding

iron ion binding

mitochondrion

mitochondrial inner membrane

ion transport

iron ion transport

membrane

integral to membrane

 
223373_s_at 0.884 8.632 5.093 1.267e-04 0.039 1.315 PLA2G12A phospholipase A2, group XIIA 4 -110850594 AF306567 4q25 Hs.389452 10

calcium ion binding

extracellular region

intracellular

cytoplasm

endoplasmic reticulum

Golgi apparatus

phospholipid metabolic process

biological_process

lipid catabolic process

hydrolase activity

calcium-dependent phospholipase A2 activity

Glycerophospholipid metabolism

Ether lipid metabolism

Arachidonic acid metabolism

Linoleic acid metabolism

alpha-Linolenic acid metabolism

Metabolic pathways

MAPK signaling pathway

Vascular smooth muscle contraction

VEGF signaling pathway

Fc epsilon RI signaling pathway

Long-term depression

GnRH signaling pathway

205902_at -1.014 6.119 -5.087 1.283e-04 0.040 1.304 KCNN3 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 1 -152946536, -152946536 AJ251016 1q21.3 Hs.490765 40

ion channel activity

calmodulin binding

ion transport

potassium ion transport

membrane

integral to membrane

small conductance calcium-activated potassium channel activity

 
225720_at -1.641 8.371 -5.080 1.299e-04 0.040 1.293 SYNPO2 synaptopodin 2 4 120029443, 120029443 AW009747 4q26 Hs.655519 14

actin binding

protein binding

nucleus

cytoplasm

 
218273_s_at 1.663 7.566 5.077 1.308e-04 0.040 1.286 PDP1 pyruvate dehyrogenase phosphatase catalytic subunit 1 8 94998258, 94998337, 94998350, 94998454, 94999167 NM_018444 8q22.1 Hs.22265 19

magnesium ion binding

protein serine/threonine phosphatase activity

[pyruvate dehydrogenase (lipoamide)] phosphatase activity

calcium ion binding

mitochondrion

mitochondrial matrix

protein amino acid dephosphorylation

protein serine/threonine phosphatase complex

hydrolase activity

 
201935_s_at -1.485 7.842 -5.076 1.310e-04 0.040 1.285 EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 1 -21005560 AI768122 1p36.12 Hs.467084 19

RNA cap binding

translation initiation factor activity

protein binding

regulation of translational initiation

RNA metabolic process

eukaryotic translation initiation factor 4F complex

interspecies interaction between organisms

 
231045_x_at -0.583 8.514 -5.074 1.316e-04 0.040 1.281 C11orf31 chromosome 11 open reading frame 31 11 57265297 H29876 11q12.1 Hs.655373 Hs.719147 6

selenium binding

cell redox homeostasis

 
217924_at -0.758 6.187 -5.071 1.322e-04 0.040 1.277 C6orf106 chromosome 6 open reading frame 106 6 -34663047 AL523965 6p21.31 Hs.643498 10    
214179_s_at -0.850 10.811 -5.055 1.364e-04 0.040 1.248 NFE2L1 nuclear factor (erythroid-derived 2)-like 1 17 43480684 H93013 17q21.3 Hs.514284 20

transcription factor activity

transcription cofactor activity

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

heme biosynthetic process

inflammatory response

anatomical structure morphogenesis

sequence-specific DNA binding

protein dimerization activity

 
219882_at -0.891 5.188 -5.055 1.365e-04 0.040 1.247 TTLL7 tubulin tyrosine ligase-like family, member 7 1 -84107644 NM_024686 1p31.1 Hs.445826 7

tubulin-tyrosine ligase activity

cilium

microtubule basal body

protein modification process

multicellular organismal development

nervous system development

ligase activity

cell differentiation

dendrite

perikaryon

 
217551_at 0.797 3.983 5.053 1.369e-04 0.040 1.245 LOC441453 similar to olfactory receptor, family 7, subfamily A, member 17 11   AA719797 11p15.1 Hs.523504 1    
228084_at 0.905 7.162 5.052 1.372e-04 0.040 1.243 PLA2G12A phospholipase A2, group XIIA 4 -110850594 AI767751 4q25 Hs.389452 10

calcium ion binding

extracellular region

intracellular

cytoplasm

endoplasmic reticulum

Golgi apparatus

phospholipid metabolic process

biological_process

lipid catabolic process

hydrolase activity

calcium-dependent phospholipase A2 activity

Glycerophospholipid metabolism

Ether lipid metabolism

Arachidonic acid metabolism

Linoleic acid metabolism

alpha-Linolenic acid metabolism

Metabolic pathways

MAPK signaling pathway

Vascular smooth muscle contraction

VEGF signaling pathway

Fc epsilon RI signaling pathway

Long-term depression

GnRH signaling pathway

232704_s_at -0.838 6.347 -5.046 1.390e-04 0.040 1.231 LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 3 -37069120 AK025207 3p22.2 Hs.719246 7

protein binding

cellular_component

biological_process

Wnt receptor signaling pathway

LRR domain binding

 
204607_at 4.074 7.980 5.039 1.408e-04 0.041 1.219 HMGCS2 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 (mitochondrial) 1 -120092525 NM_005518 1p13-p12 Hs.59889 13

hydroxymethylglutaryl-CoA synthase activity

hydroxymethylglutaryl-CoA synthase activity

mitochondrion

mitochondrial inner membrane

mitochondrial matrix

cholesterol biosynthetic process

response to nutrient

metabolic process

isoprenoid biosynthetic process

transferase activity

response to drug

response to peptide hormone stimulus

Synthesis and degradation of ketone bodies

Valine, leucine and isoleucine degradation

Butanoate metabolism

Terpenoid backbone biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

PPAR signaling pathway

202203_s_at -1.234 7.181 -5.036 1.417e-04 0.041 1.214 AMFR autocrine motility factor receptor 16 -54952864 NM_001144 16q21 Hs.295137 33

protein polyubiquitination

integral to membrane of membrane fraction

ubiquitin-protein ligase activity

ubiquitin-protein ligase activity

receptor activity

receptor activity

protein binding

endoplasmic reticulum

ubiquitin-dependent protein catabolic process

cell motion

signal transduction

zinc ion binding

membrane

integral to membrane

integral to membrane

ligase activity

integral to endoplasmic reticulum membrane

ER-associated protein catabolic process

ER-associated protein catabolic process

endoplasmic reticulum unfolded protein response

metal ion binding

protein oligomerization

 
235635_at -0.746 5.358 -5.035 1.419e-04 0.041 1.213 ARHGAP5 Rho GTPase activating protein 5 14 31616245 N50119 14q12 Hs.592313 19

GTPase activity

GTPase activator activity

Rho GTPase activator activity

GTP binding

intracellular

cytoplasm

cell adhesion

signal transduction

small GTPase mediated signal transduction

Rho protein signal transduction

membrane

SH2 domain binding

Focal adhesion

Leukocyte transendothelial migration

208753_s_at -0.893 8.160 -5.016 1.474e-04 0.042 1.178 NAP1L1 nucleosome assembly protein 1-like 1 12 -74724938 BC002387 12q21.2 Hs.524599 Hs.695185 17

protein binding

nucleus

chromatin assembly complex

DNA replication

nucleosome assembly

positive regulation of cell proliferation

melanosome

 
1555522_s_at -0.844 7.572 -5.010 1.489e-04 0.042 1.168 MEMO1 mediator of cell motility 1 2 -31946398, -31946397 BC036262 2p22-p21 Hs.444969 10

nucleus

cytosol

 
1558924_s_at -1.805 6.486 -5.008 1.495e-04 0.042 1.165 CLIP1 CAP-GLY domain containing linker protein 1 12 -121321933 BF673049 12q24.3 Hs.524809 37

kinetochore

nucleic acid binding

protein binding

cytoplasm

endosome

microtubule

intermediate filament

mitosis

microtubule binding

zinc ion binding

protein homodimerization activity

metal ion binding

 
230904_at -1.395 5.557 -5.006 1.501e-04 0.042 1.161 FSD1L fibronectin type III and SPRY domain containing 1-like 9 107250135, 107250135, 107250145 W42665 9q31 Hs.136901 4

molecular_function

cellular_component

biological_process

 
205335_s_at -0.528 8.585 -5.002 1.513e-04 0.042 1.154 SRP19 signal recognition particle 19kDa 5 112224891 NM_003135 5q21-q22 Hs.637001 14

nucleolus

cytoplasm

signal recognition particle, endoplasmic reticulum targeting

SRP-dependent cotranslational protein targeting to membrane

7S RNA binding

response to drug

Protein export

211928_at -0.648 8.973 -5.002 1.513e-04 0.042 1.154 DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 14 101500617 AB002323 14q32 14q32.3-qter Hs.649497 33

nucleotide binding

microtubule motor activity

protein binding

ATP binding

cytoplasm

Golgi apparatus

cytoplasmic dynein complex

microtubule

microtubule-based movement

mitotic spindle organization

ATPase activity, coupled

 
203066_at -1.971 6.357 -4.999 1.521e-04 0.042 1.149 CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 10 -125757173 NM_014863 10q26 Hs.287537 12

Golgi apparatus

membrane

integral to membrane

transferase activity

hexose biosynthetic process

3'-phosphoadenosine 5'-phosphosulfate binding

N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity

Chondroitin sulfate biosynthesis

212510_at 0.733 10.561 4.997 1.528e-04 0.042 1.145 GPD1L glycerol-3-phosphate dehydrogenase 1-like 3 32123147 AA135522 3p22.3 Hs.82432 5

glycerol-3-phosphate dehydrogenase (NAD+) activity

binding

cytoplasm

carbohydrate metabolic process

glycerol-3-phosphate dehydrogenase complex

protein homodimerization activity

glycerol-3-phosphate catabolic process

NAD or NADH binding

oxidation reduction

Glycerophospholipid metabolism

204560_at -1.330 4.975 -4.993 1.539e-04 0.042 1.139 FKBP5 FK506 binding protein 5 6 -35656311, -35649339, -35649339, -35649339 NM_004117 6p21.3-p21.2 Hs.407190 50

peptidyl-prolyl cis-trans isomerase activity

FK506 binding

nucleus

cytoplasm

protein folding

isomerase activity

heat shock protein binding

 
225329_at 0.508 6.748 4.988 1.554e-04 0.042 1.129 LOC348262 hypothetical protein LOC348262 17 -2338651 BF338291 17q25.3 Hs.514632 1    
222617_s_at -1.002 7.394 -4.972 1.606e-04 0.043 1.100 C10orf84 chromosome 10 open reading frame 84 10 -120058561 AI147026 10q26.11 Hs.372309 5    
227923_at 0.872 7.008 4.966 1.622e-04 0.043 1.091 SHANK3 SH3 and multiple ankyrin repeat domains 3 22 49459935 BF439330 22q13.3 Hs.149035 21

MAPKKK cascade

embryonic epithelial tube formation

protein binding

cytoplasm

plasma membrane

postsynaptic density

SH3 domain binding

cell junction

synapse

postsynaptic membrane

 
228696_at 0.515 4.077 4.966 1.624e-04 0.043 1.090 SLC45A3 solute carrier family 45, member 3 1 -203893603 AA631143 1q32.1 Hs.278695 9

transport

membrane

integral to membrane

 
243009_at 0.809 5.692 4.961 1.639e-04 0.043 1.081 LOC441242 hypothetical LOC441242 7   AW513654 7q11.21 Hs.656146 2    
202352_s_at -0.615 8.329 -4.961 1.641e-04 0.043 1.080 PSMD12 proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 17 -62767081, -62767080 AI446530 17q24.2 Hs.646575 39

protein binding

cytosol

proteasome regulatory particle

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

63825_at -1.053 6.770 -4.947 1.686e-04 0.044 1.055 ABHD2 abhydrolase domain containing 2 15 87432384 AI557319 15q26.1 Hs.122337 Hs.705984 10

molecular_function

carboxylesterase activity

biological_process

response to wounding

membrane

integral to membrane

hydrolase activity

negative regulation of cell migration

 
1555814_a_at -0.925 9.327 -4.942 1.703e-04 0.044 1.046 RHOA ras homolog gene family, member A 3 -49371582 AF498970 3p21.3 Hs.247077 Hs.709788 348

nucleotide binding

magnesium ion binding

cell morphogenesis

GTPase activity

protein binding

GTP binding

intracellular

nucleus

cytoplasm

cytoskeleton

plasma membrane

regulation of transcription from RNA polymerase II promoter

cell adhesion

cell-matrix adhesion

small GTPase mediated signal transduction

Rho protein signal transduction

skeletal muscle tissue development

myosin binding

actin cytoskeleton organization

cell differentiation

positive regulation of NF-kappaB import into nucleus

positive regulation of I-kappaB kinase/NF-kappaB cascade

negative regulation of neuron apoptosis

interspecies interaction between organisms

negative regulation of neuron differentiation

positive regulation of neuron differentiation

positive regulation of stress fiber formation

Chemokine signaling pathway

Vascular smooth muscle contraction

Wnt signaling pathway

TGF-beta signaling pathway

Axon guidance

Focal adhesion

Adherens junction

Tight junction

T cell receptor signaling pathway

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Pathogenic Escherichia coli infection - EHEC

Pathways in cancer

202942_at 0.983 9.610 4.939 1.711e-04 0.044 1.042 ETFB electron-transfer-flavoprotein, beta polypeptide 19 -56540220, -56540220 NM_001985 19q13.3 Hs.348531 16

mitochondrion

mitochondrial matrix

transport

electron carrier activity

electron transport chain

 
227025_at -0.598 6.105 -4.938 1.715e-04 0.044 1.040 PPHLN1 periphilin 1 12 41006213, 41006213, 41006213, 41006213 BG284497 12q12 Hs.444157 13

nucleus

cytoplasm

keratinization

 
207180_s_at -0.631 7.429 -4.937 1.718e-04 0.044 1.038 HTATIP2 HIV-1 Tat interactive protein 2, 30kDa 11 20341806, 20341822, 20341864, 20341978, 20342262 NM_006410 11p15.1 Hs.90753 31

RNA polymerase II transcription factor activity

transcription coactivator activity

protein binding

nucleus

nuclear envelope

cytoplasm

regulation of transcription from RNA polymerase II promoter

anti-apoptosis

induction of apoptosis

multicellular organismal development

oxidoreductase activity

cell differentiation

regulation of apoptosis

interspecies interaction between organisms

regulation of angiogenesis

nuclear import

oxidation reduction

 
205338_s_at 0.580 4.924 4.930 1.742e-04 0.044 1.026 DCT dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2) 13 -93889841 NM_001922 13q32 Hs.301865 41

dopachrome isomerase activity

copper ion binding

microsome

cytosol

melanin biosynthetic process from tyrosine

metabolic process

zinc ion binding

epidermis development

membrane

integral to membrane

oxidoreductase activity

isomerase activity

melanosome

metal ion binding

pigmentation during development

cell development

Tyrosine metabolism

Metabolic pathways

Melanogenesis

225895_at -1.319 9.185 -4.929 1.746e-04 0.044 1.023 SYNPO2 synaptopodin 2 4 120029443, 120029443 AI634580 4q26 Hs.655519 14

actin binding

protein binding

nucleus

cytoplasm

 
228647_at -0.944 6.202 -4.925 1.761e-04 0.044 1.016 LOC100049716 hypothetical protein LOC100049716 12   AI675844 12p13.33 Hs.655804 1    
1554801_at 0.533 3.306 4.923 1.765e-04 0.044 1.014 C5orf40 chromosome 5 open reading frame 40 5 -156701184 BC022570 5q33.3 Hs.437066 3

membrane

integral to membrane

 
201132_at -0.784 8.987 -4.923 1.766e-04 0.044 1.014 HNRNPH2 heterogeneous nuclear ribonucleoprotein H2 (H') X 100549846 NM_019597 Xq22 Hs.632828 17

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

nucleoplasm

nucleolus

cytoplasm

cytoskeleton

heterogeneous nuclear ribonucleoprotein complex

 
222423_at -0.643 7.461 -4.920 1.775e-04 0.044 1.008 NDFIP1 Nedd4 family interacting protein 1 5 141468507 H05010 5q31.3 Hs.653510 Hs.9788 11

signal transducer activity

protein binding

Golgi apparatus

cellular iron ion homeostasis

negative regulation of gene expression

membrane

integral to membrane

positive regulation of protein ubiquitination

negative regulation of transporter activity

positive regulation of I-kappaB kinase/NF-kappaB cascade

perinuclear region of cytoplasm

negative regulation of protein transport

 
213473_at -0.629 6.935 -4.916 1.790e-04 0.044 1.001 BRAP BRCA1 associated protein 12 -110564332 AL042733 12q24 Hs.530940 12

ubiquitin-protein ligase activity

cytoplasm

zinc ion binding

negative regulation of signal transduction

ligase activity

modification-dependent protein catabolic process

identical protein binding

metal ion binding

 
232184_at -0.540 2.824 -4.911 1.810e-04 0.044 0.991 ALS2 amyotrophic lateral sclerosis 2 (juvenile) 2 -202332427, -202273231 AK023024 2q33.1 Hs.471096 Hs.621812 36

ruffle

guanyl-nucleotide exchange factor activity

Ran guanyl-nucleotide exchange factor activity

protein binding

intracellular

early endosome

centrosome

cytosol

endosome organization

cell death

Rab guanyl-nucleotide exchange factor activity

Rab GTPase binding

Rab GTPase binding

lamellipodium

dendrite

Rac guanyl-nucleotide exchange factor activity

positive regulation of Rac GTPase activity

positive regulation of Rac protein signal transduction

regulation of Rho protein signal transduction

vesicular fraction

protein homodimerization activity

protein complex

protein serine/threonine kinase activator activity

positive regulation of protein kinase activity

neuron projection morphogenesis

regulation of endosome size

Amyotrophic lateral sclerosis (ALS)

200915_x_at -0.702 11.862 -4.909 1.816e-04 0.044 0.988 KTN1 kinectin 1 (kinesin receptor) 14 55116677, 55116677 NM_004986 14q22.1 Hs.509414 30

molecular_function

membrane fraction

endoplasmic reticulum

endoplasmic reticulum membrane

integral to plasma membrane

microtubule-based movement

membrane

 
1552701_a_at 0.935 4.232 4.907 1.821e-04 0.044 0.985 CARD16 caspase recruitment domain family, member 16 11 -104417262 NM_052889   Hs.348365 8

cysteine-type endopeptidase activity

cysteine-type endopeptidase inhibitor activity

protein binding

intracellular

proteolysis

peptidase inhibitor activity

regulation of apoptosis

 
201397_at 0.510 6.069 4.904 1.835e-04 0.044 0.979 PHGDH phosphoglycerate dehydrogenase 1 120055941 NM_006623 1p12 Hs.487296 18

phosphoglycerate dehydrogenase activity

L-serine biosynthetic process

brain development

cellular amino acid biosynthetic process

electron carrier activity

oxidoreductase activity

cofactor binding

NAD or NADH binding

oxidation reduction

Glycine, serine and threonine metabolism

Metabolic pathways

203933_at -0.615 6.466 -4.900 1.848e-04 0.044 0.972 RAB11FIP3 RAB11 family interacting protein 3 (class II) 16 415668, 464850 NM_014700 16p13.3 Hs.531642 18

calcium ion binding

protein binding

protein transport

membrane

Rab GTPase binding

recycling endosome

Endocytosis

222572_at 1.464 9.672 4.900 1.848e-04 0.044 0.972 PDP1 pyruvate dehyrogenase phosphatase catalytic subunit 1 8 94998258, 94998337, 94998350, 94998454, 94999167 BG542521 8q22.1 Hs.22265 19

magnesium ion binding

protein serine/threonine phosphatase activity

[pyruvate dehydrogenase (lipoamide)] phosphatase activity

calcium ion binding

mitochondrion

mitochondrial matrix

protein amino acid dephosphorylation

protein serine/threonine phosphatase complex

hydrolase activity

 
224856_at -1.999 8.312 -4.899 1.852e-04 0.044 0.970 FKBP5 FK506 binding protein 5 6 -35656311, -35649339, -35649339, -35649339 W86302 6p21.3-p21.2 Hs.407190 50

peptidyl-prolyl cis-trans isomerase activity

FK506 binding

nucleus

cytoplasm

protein folding

isomerase activity

heat shock protein binding

 
210445_at 0.529 4.524 4.898 1.855e-04 0.044 0.968 FABP6 fatty acid binding protein 6, ileal 5 159546951, 159558625, 159589014 U19869 5q33.3-q34 Hs.519719 18

transporter activity

fatty acid binding

cytoplasm

cytosol

lipid metabolic process

transport

steroid metabolic process

negative regulation of cell proliferation

PPAR signaling pathway

222437_s_at -0.698 9.163 -4.897 1.860e-04 0.044 0.966 VPS24 vacuolar protein sorting 24 homolog (S. cerevisiae) 2 -86584063 BC004419 2p24.3-p24.1 Hs.591582 25

protein binding

cytoplasm

endosome

cytosol

cell cycle

protein transport

membrane

late endosome membrane

cell division

Endocytosis

202179_at -0.537 6.492 -4.887 1.895e-04 0.044 0.949 BLMH bleomycin hydrolase 17 -25599348 NM_000386 17q11.2 Hs.371914 27

aminopeptidase activity

carboxypeptidase activity

cysteine-type endopeptidase activity

soluble fraction

nucleus

cytoplasm

proteolysis

peptidase activity

response to toxin

response to drug

 
221497_x_at -1.033 7.147 -4.884 1.908e-04 0.044 0.943 EGLN1 egl nine homolog 1 (C. elegans) 1 -229566120 BC005369 1q42.1 Hs.444450 Hs.710300 42

response to hypoxia

embryonic placenta development

iron ion binding

protein binding

cytosol

heart development

zinc ion binding

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

L-ascorbic acid binding

peptidyl-proline dioxygenase activity

oxygen homeostasis

negative regulation of transcription factor activity

metal ion binding

oxidation reduction

Pathways in cancer

Renal cell carcinoma

235521_at 0.826 6.453 4.878 1.931e-04 0.045 0.932 HOXA3 homeobox A3 7 -27112333, -27112333, -27112333 AW137982 7p15-p14 Hs.659337 18

blood vessel remodeling

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

positive regulation of cell proliferation

anterior/posterior pattern formation

specification of organ position

glossopharyngeal nerve morphogenesis

thyroid gland development

sequence-specific DNA binding

thymus development

organ formation

embryonic skeletal system morphogenesis

cartilage development

parathyroid gland development

 
217995_at -0.861 9.138 -4.877 1.935e-04 0.045 0.930 SQRDL sulfide quinone reductase-like (yeast) 15 43714547 NM_021199 15q15 Hs.511251 6

mitochondrion

mitochondrial inner membrane

oxidoreductase activity

oxidation reduction

 
213645_at -1.712 6.686 -4.874 1.945e-04 0.045 0.925 ENOSF1 enolase superfamily member 1 18 -663860, -663860, -662543 AF305057 18p11.32 Hs.369762 Hs.658550 12

magnesium ion binding

cellular_component

mitochondrion

metabolic process

cellular amino acid catabolic process

isomerase activity

 
209406_at -0.758 8.221 -4.870 1.962e-04 0.045 0.917 BAG2 BCL2-associated athanogene 2 6 57145062 AF095192 6p12.1-p11.2 Hs.719303 16

protein binding

protein folding

apoptosis

protein metabolic process

 
208754_s_at -0.983 7.540 -4.856 2.016e-04 0.046 0.893 NAP1L1 nucleosome assembly protein 1-like 1 12 -74724938 AL162068 12q21.2 Hs.524599 Hs.695185 17

protein binding

nucleus

chromatin assembly complex

DNA replication

nucleosome assembly

positive regulation of cell proliferation

melanosome

 
208456_s_at -0.974 6.926 -4.850 2.038e-04 0.046 0.883 RRAS2 related RAS viral (r-ras) oncogene homolog 2 11 -14256041, -14256041 NM_012250 11p15.2 Hs.502004 25

nucleotide binding

GTPase activity

protein binding

GTP binding

intracellular

endoplasmic reticulum

plasma membrane

Ras protein signal transduction

cellular process

positive regulation of cell migration

MAPK signaling pathway

Tight junction

Regulation of actin cytoskeleton

227718_at -1.204 6.497 -4.848 2.047e-04 0.046 0.879 PURB purine-rich element binding protein B 7 -44882416 BF337790 7p13 Hs.349150 Hs.596321 13

translation repressor activity, nucleic acid binding

double-stranded DNA binding

single-stranded DNA binding

transcription factor activity

mRNA binding

nucleus

DNA replication factor A complex

transcription factor binding

specific transcriptional repressor activity

purine-rich negative regulatory element binding

regulation of transcription

regulation of myeloid cell differentiation

negative regulation of transcription, DNA-dependent

SMAD binding

 
224758_at -0.639 4.495 -4.848 2.049e-04 0.046 0.878 PL-5283 PL-5283 protein 7 134997760 BG393032 7q33 Hs.200022 3    
225043_at -1.009 7.196 -4.847 2.050e-04 0.046 0.878 SLC15A4 solute carrier family 15, member 4 12 -127843692 AW304786 12q24.32-q24.33 Hs.507260 Hs.699387 6

transporter activity

oligopeptide transport

protein transport

symporter activity

membrane

integral to membrane

 
202322_s_at -0.645 8.013 -4.842 2.074e-04 0.046 0.867 GGPS1 geranylgeranyl diphosphate synthase 1 1 233558375, 233558491 NM_004837 1q43 Hs.719270 13

dimethylallyltranstransferase activity

farnesyltranstransferase activity

geranyltranstransferase activity

soluble fraction

cytoplasm

isoprenoid biosynthetic process

transferase activity

Terpenoid backbone biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

231779_at -1.006 6.289 -4.839 2.083e-04 0.046 0.863 IRAK2 interleukin-1 receptor-associated kinase 2 3 10181562 AI246590 3p25.3 Hs.449207 15

regulation of cytokine-mediated signaling pathway

MyD88-dependent toll-like receptor signaling pathway

protein kinase activity

NF-kappaB-inducing kinase activity

ATP binding

protein amino acid phosphorylation

inflammatory response

signal transduction

I-kappaB kinase/NF-kappaB cascade

cell surface

lipopolysaccharide-mediated signaling pathway

negative regulation of NF-kappaB transcription factor activity

protein homodimerization activity

protein heterodimerization activity

positive regulation of NF-kappaB transcription factor activity

interleukin-1-mediated signaling pathway

response to interleukin-1

Apoptosis

Neurotrophin signaling pathway

202646_s_at -0.661 11.463 -4.838 2.088e-04 0.046 0.861 CSDE1 cold shock domain containing E1, RNA-binding 1 -115061060, -115061060, -115061059 AA167775 1p22 Hs.69855 25

DNA binding

RNA binding

protein binding

cytoplasm

regulation of transcription, DNA-dependent

male gonad development

 
212219_at -0.572 8.217 -4.836 2.096e-04 0.046 0.857 PSME4 proteasome (prosome, macropain) activator subunit 4 2 -53944707 D38521 2p16.2 Hs.413801 30

binding

nucleus

cytosol

multicellular organismal development

spermatogenesis

nuclear speck

cell differentiation

protein complex

Proteasome

226206_at -0.873 8.209 -4.831 2.116e-04 0.046 0.848 MAFK v-maf musculoaponeurotic fibrosarcoma oncogene homolog K (avian) 7 1536893 BG231691 7p22.3 Hs.520612 14

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

nervous system development

sequence-specific DNA binding

 
218177_at -0.978 5.945 -4.822 2.156e-04 0.047 0.831 CHMP1B chromatin modifying protein 1B 18 11841388 AA293502 18p11.21 Hs.656244 16

cytoplasm

endosome

cytosol

cell cycle

protein transport

membrane

protein domain specific binding

cell division

Endocytosis

242029_at -0.612 6.163 -4.820 2.164e-04 0.047 0.828 FNDC3B fibronectin type III domain containing 3B 3 173240111, 173241037 N32832 3q26.31 Hs.159430 9

endoplasmic reticulum

membrane

integral to membrane

 
212845_at -0.813 10.495 -4.817 2.177e-04 0.047 0.823 SAMD4A sterile alpha motif domain containing 4A 14 54104386, 54291255 AB028976 14q22.2 Hs.98259 4

cytoplasm

synaptosome

translation repressor activity

dendrite

positive regulation of translation

 
222628_s_at 0.567 7.225 4.816 2.182e-04 0.047 0.821 REV1 REV1 homolog (S. cerevisiae) 2 -99383369 AA195405 2q11.1-q11.2 Hs.443077 27

magnesium ion binding

damaged DNA binding

DNA-directed DNA polymerase activity

protein binding

intracellular

nucleus

DNA replication

DNA repair

response to DNA damage stimulus

response to UV

transferase activity

deoxycytidyl transferase activity

error-prone postreplication DNA repair

 
219631_at -0.875 5.780 -4.815 2.184e-04 0.047 0.820 LRP12 low density lipoprotein-related protein 12 8 -105570642 NM_024937 8q22.2-q23.1 Hs.600630 8

receptor activity

low-density lipoprotein receptor activity

protein binding

nucleolus

cytoplasm

plasma membrane

integral to plasma membrane

coated pit

endocytosis

signal transduction

regulation of growth

 
206799_at 2.245 5.452 4.814 2.192e-04 0.047 0.816 SCGB1D2 secretoglobin, family 1D, member 2 11 61766299 NM_006551 11q13 Hs.204096 9

binding

extracellular region

extracellular space

 
222989_s_at -0.801 7.341 -4.812 2.199e-04 0.047 0.813 UBQLN1 ubiquilin 1 9 -85464697 NM_013438 9q21.2-q21.3 9q22 Hs.9589 46

nucleus

cytoplasm

cytosol

kinase binding

protein complex

perinuclear region of cytoplasm

 
209281_s_at -0.918 6.140 -4.811 2.205e-04 0.047 0.811 ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 12 -88505956 M95541 12q21.3 Hs.506276 38

nucleotide binding

magnesium ion binding

calcium-transporting ATPase activity

calcium ion binding

calmodulin binding

ATP binding

plasma membrane

integral to plasma membrane

ATP biosynthetic process

cation transport

calcium ion transport

metabolic process

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

Calcium signaling pathway

240259_at -1.509 5.668 -4.808 2.217e-04 0.047 0.806 FLRT2 fibronectin leucine rich transmembrane protein 2 14 85066240 AI188161 14q24-q32 Hs.533710 Hs.624735 Hs.719261 9

receptor signaling protein activity

proteinaceous extracellular matrix

integral to plasma membrane

cell adhesion

biological_process

membrane

protein binding, bridging

 
225007_at -0.705 7.564 -4.803 2.240e-04 0.047 0.797 G3BP1 GTPase activating protein (SH3 domain) binding protein 1 5 151131668 AV705516 5q33.1 Hs.587054 27

nucleotide binding

DNA binding

RNA binding

ATP-dependent DNA helicase activity

ATP-dependent RNA helicase activity

helicase activity

endonuclease activity

protein binding

ATP binding

intracellular

nucleus

cytoplasm

cytosol

plasma membrane

transport

Ras protein signal transduction

hydrolase activity

 
203544_s_at -0.769 7.175 -4.798 2.259e-04 0.047 0.789 STAM signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 10 17726129 NM_003473 10p14-p13 Hs.441498 30

SH3/SH2 adaptor activity

protein binding

cytoplasm

endosome

cytosol

intracellular protein transport

signal transduction

membrane

Endocytosis

Jak-STAT signaling pathway

210211_s_at -0.738 11.097 -4.798 2.262e-04 0.047 0.788 HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 14 -101616827, -101616827 AF028832 14q32.33 Hs.525600 Hs.700831 275

nucleotide binding

ATP binding

cytoplasm

cytosol

cytosol

mitochondrial transport

response to unfolded protein

signal transduction

nitric-oxide synthase regulator activity

TPR domain binding

TPR domain binding

cellular chaperone-mediated protein complex assembly

protein refolding

melanosome

protein homodimerization activity

positive regulation of nitric oxide biosynthetic process

unfolded protein binding

mitochondrial outer membrane translocase complex assembly

Antigen processing and presentation

Pathways in cancer

Prostate cancer

212878_s_at -0.839 7.919 -4.796 2.267e-04 0.047 0.786 KLC1 kinesin light chain 1 14 103165277, 103165277 AA284075 14q32.3 Hs.20107 Hs.657678 31

microtubule motor activity

protein binding

cytoplasm

cytosol

kinesin complex

microtubule

axon cargo transport

axon

cytoplasmic vesicle

ciliary rootlet

membrane-bounded organelle

 
206238_s_at -0.820 6.316 -4.794 2.280e-04 0.047 0.780 YAF2 YY1 associated factor 2 12 -40837173 NM_005748 12q12 Hs.708084 9

transcription coactivator activity

transcription corepressor activity

protein binding

intracellular

nucleus

zinc ion binding

negative regulation of transcription

positive regulation of transcription

metal ion binding

 
1555363_s_at 0.476 5.734 4.788 2.306e-04 0.047 0.770 LOC284440 hypothetical LOC284440 19 -19728182 BC034236 19p13.11 Hs.665307 4    
238877_at -0.920 8.373 -4.787 2.308e-04 0.047 0.769 EYA4 eyes absent homolog 4 (Drosophila) 6 133604187 BE674583 6q23 Hs.596680 15

magnesium ion binding

protein tyrosine phosphatase activity

nucleus

cytoplasm

DNA repair

response to DNA damage stimulus

multicellular organismal development

visual perception

metabolic process

anatomical structure morphogenesis

chromatin modification

hydrolase activity

regulation of transcription

 
212589_at -0.780 8.264 -4.786 2.314e-04 0.047 0.767 RRAS2 related RAS viral (r-ras) oncogene homolog 2 11 -14256041, -14256041 AI753792 11p15.2 Hs.502004 25

nucleotide binding

GTPase activity

protein binding

GTP binding

intracellular

endoplasmic reticulum

plasma membrane

Ras protein signal transduction

cellular process

positive regulation of cell migration

MAPK signaling pathway

Tight junction

Regulation of actin cytoskeleton

232173_at 0.673 5.724 4.780 2.343e-04 0.048 0.756 CLEC2L C-type lectin domain family 2, member L 7 138859213 W60866 7q34 Hs.57806 3

binding

sugar binding

membrane

integral to membrane

 
203909_at -0.796 6.966 -4.767 2.402e-04 0.049 0.733 SLC9A6 solute carrier family 9 (sodium/hydrogen exchanger), member 6 X 134895251 NM_006359 Xq26.3 Hs.62185 11

mitochondrion

endosome

endoplasmic reticulum membrane

microsome

plasma membrane

cation transport

sodium ion transport

regulation of pH

antiporter activity

solute:hydrogen antiporter activity

sodium:hydrogen antiporter activity

integral to membrane

sodium ion binding

early endosome membrane

recycling endosome membrane

Cardiac muscle contraction

212993_at -0.695 7.263 -4.760 2.437e-04 0.049 0.720 NACC2 NACC family member 2, BEN and BTB (POZ) domain containing 9 -138043023 AA114166 9q34.3 Hs.112895 3

protein binding

nucleus

positive regulation of cell proliferation

negative regulation of transcription

specific transcriptional repressor activity

nuclear body

protein homooligomerization

 
200835_s_at -0.948 8.763 -4.759 2.441e-04 0.049 0.718 MAP4 microtubule-associated protein 4 3 -47989573, -47867183, -47867183 AI553791 3p21 Hs.517949 40

structural molecule activity

protein binding

microtubule

microtubule associated complex

negative regulation of microtubule depolymerization

 
225010_at -0.733 7.666 -4.752 2.477e-04 0.049 0.705 CCDC6 coiled-coil domain containing 6 10 -61218526 AK024913 10q21 Hs.591360 20

structural constituent of cytoskeleton

protein binding

cellular_component

cytoplasm

cytoskeleton

biological_process

SH3 domain binding

Pathways in cancer

Thyroid cancer

201106_at -0.678 10.229 -4.743 2.522e-04 0.050 0.688 GPX4 glutathione peroxidase 4 (phospholipid hydroperoxidase) 19 1054935, 1055648 NM_002085 19p13.3 Hs.433951 50

glutathione peroxidase activity

soluble fraction

nucleus

nuclear envelope

cytoplasm

mitochondrion

mitochondrial inner membrane

cytosol

chromatin organization

phospholipid metabolic process

glutathione metabolic process

response to oxidative stress

multicellular organismal development

spermatogenesis

selenium binding

oxidoreductase activity

hydrogen peroxide catabolic process

glutathione binding

phospholipid-hydroperoxide glutathione peroxidase activity

regulation of inflammatory response

oxidation reduction

Glutathione metabolism

Arachidonic acid metabolism

202779_s_at -1.371 5.832 -4.739 2.539e-04 0.050 0.682 UBE2S ubiquitin-conjugating enzyme E2S 19 -60604461 NM_014501 19q13.43 Hs.396393 6

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

1558675_s_at -0.814 6.888 -4.735 2.558e-04 0.050 0.675 SDCCAG1 serologically defined colon cancer antigen 1 14 -49320281 AV724508 14q22 Hs.655964 8

nucleus

cytoplasm

 
236192_at -0.571 5.637 -4.735 2.559e-04 0.050 0.675 HOOK3 hook homolog 3 (Drosophila) 8 42871189 BF447112 8p11.21 Hs.162852 13

cytoplasm

Golgi apparatus

cis-Golgi network

cytoskeleton

microtubule

endosome organization

lysosome organization

microtubule binding

endosome to lysosome transport

protein transport

HOPS complex

cytoplasmic microtubule organization

identical protein binding

early endosome to late endosome transport

Golgi localization

FHF complex

 
202055_at -0.912 8.509 -4.735 2.562e-04 0.050 0.674 KPNA1 karyopherin alpha 1 (importin alpha 5) 3 -123623437 AA652173 3q21 Hs.161008 92

regulation of DNA recombination

protein binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

cytosol

NLS-bearing substrate import into nucleus

intracellular protein transport

nuclear localization sequence binding

protein transporter activity

interspecies interaction between organisms

 
204143_s_at -1.636 6.074 -4.732 2.576e-04 0.050 0.669 ENOSF1 enolase superfamily member 1 18 -663860, -663860, -662543 NM_017512 18p11.32 Hs.369762 Hs.658550 12

magnesium ion binding

cellular_component

mitochondrion

metabolic process

cellular amino acid catabolic process

isomerase activity

 
200994_at -0.477 10.164 -4.731 2.583e-04 0.050 0.667 IPO7 importin 7 11 9362744 BG291787 11p15.4 Hs.718440 22

protein import into nucleus, docking

small GTPase regulator activity

transporter activity

soluble fraction

nucleus

nuclear pore

cytoplasm

intracellular protein transport

signal transduction

Ran GTPase binding

protein transporter activity

histone binding

interspecies interaction between organisms

 
209439_s_at 0.673 6.957 4.729 2.594e-04 0.050 0.663 PHKA2 phosphorylase kinase, alpha 2 (liver) X -18820336 D38616 Xp22.2-p22.1 Hs.54941 Hs.607628 Hs.622882 29

catalytic activity

phosphorylase kinase activity

calmodulin binding

plasma membrane

phosphorylase kinase complex

carbohydrate metabolic process

glycogen metabolic process

generation of precursor metabolites and energy

protein modification process

Calcium signaling pathway

Insulin signaling pathway

219629_at 0.730 5.097 4.728 2.595e-04 0.050 0.662 FAM118A family with sequence similarity 118, member A 22 44083744, 44084448 NM_017911 22q13 Hs.265018 6

membrane

integral to membrane

 
225521_at -0.926 5.871 -4.728 2.596e-04 0.050 0.662 ANAPC7 anaphase promoting complex subunit 7 12 -109297656, -109295087 AL137586 12q24.11 Hs.524741 30

binding

nucleoplasm

cytosol

cell cycle

mitosis

modification-dependent protein catabolic process

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

cell division

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

222656_at -1.266 6.165 -4.723 2.625e-04 0.050 0.652 UBE2W ubiquitin-conjugating enzyme E2W (putative) 8 -74865393 AI625741 8q21.11 Hs.597486 7

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

205903_s_at -0.666 4.868 -4.721 2.632e-04 0.050 0.650 KCNN3 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 1 -152946536, -152946536 NM_002249 1q21.3 Hs.490765 40

ion channel activity

calmodulin binding

ion transport

potassium ion transport

membrane

integral to membrane

small conductance calcium-activated potassium channel activity

 
204186_s_at -0.990 7.957 -4.715 2.667e-04 0.050 0.637 PPID peptidylprolyl isomerase D 4 -159849728 AI014573 4q31.3 Hs.581725 25

peptidyl-prolyl cis-trans isomerase activity

cytoplasm

protein folding

cyclosporin A binding

isomerase activity

heat shock protein binding

Calcium signaling pathway

Parkinson's disease

Huntington's disease

60471_at 0.613 5.612 4.713 2.673e-04 0.050 0.635 RIN3 Ras and Rab interactor 3 14 92049877 AA625133 14q32.12 Hs.326822 8

GTPase activator activity

protein binding

cellular_component

cytoplasm

early endosome

endocytosis

signal transduction

Ras GTPase binding

cytoplasmic vesicle

 
211672_s_at -0.884 6.332 -4.708 2.702e-04 0.051 0.625 ARPC4 actin related protein 2/3 complex, subunit 4, 20kDa 3 9809226 AF019888 3p25.3 Hs.323342 16

cytoplasm

cytoskeleton

Arp2/3 protein complex

actin filament polymerization

protein binding, bridging

cell projection

actin nucleation

actin filament binding

Fc gamma R-mediated phagocytosis

Regulation of actin cytoskeleton

221752_at -0.803 6.388 -4.705 2.716e-04 0.051 0.621 SSH1 slingshot homolog 1 (Drosophila) 12 -107709824, -107709824, -107700595 AL041728 12q24.11 Hs.199763 23

cell morphogenesis

actin binding

protein tyrosine phosphatase activity

protein binding

cytoplasm

cytoskeleton

plasma membrane

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

lamellipodium

actin cytoskeleton organization

Regulation of actin cytoskeleton

219939_s_at -0.543 12.053 -4.696 2.768e-04 0.052 0.603 CSDE1 cold shock domain containing E1, RNA-binding 1 -115061060, -115061060, -115061059 NM_007158 1p22 Hs.69855 25

DNA binding

RNA binding

protein binding

cytoplasm

regulation of transcription, DNA-dependent

male gonad development

 
200059_s_at -0.735 10.457 -4.691 2.796e-04 0.052 0.594 RHOA ras homolog gene family, member A 3 -49371582 BC001360 3p21.3 Hs.247077 Hs.709788 348

nucleotide binding

magnesium ion binding

cell morphogenesis

GTPase activity

protein binding

GTP binding

intracellular

nucleus

cytoplasm

cytoskeleton

plasma membrane

regulation of transcription from RNA polymerase II promoter

cell adhesion

cell-matrix adhesion

small GTPase mediated signal transduction

Rho protein signal transduction

skeletal muscle tissue development

myosin binding

actin cytoskeleton organization

cell differentiation

positive regulation of NF-kappaB import into nucleus

positive regulation of I-kappaB kinase/NF-kappaB cascade

negative regulation of neuron apoptosis

interspecies interaction between organisms

negative regulation of neuron differentiation

positive regulation of neuron differentiation

positive regulation of stress fiber formation

Chemokine signaling pathway

Vascular smooth muscle contraction

Wnt signaling pathway

TGF-beta signaling pathway

Axon guidance

Focal adhesion

Adherens junction

Tight junction

T cell receptor signaling pathway

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Pathogenic Escherichia coli infection - EHEC

Pathways in cancer

235549_at -1.322 4.321 -4.690 2.798e-04 0.052 0.594 RNF144B ring finger protein 144B 6 18495572 AL575512 6p22.3 Hs.148741 6

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

apoptosis

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

protein ubiquitination during ubiquitin-dependent protein catabolic process

metal ion binding

 
203836_s_at 0.996 6.368 4.687 2.819e-04 0.052 0.587 MAP3K5 mitogen-activated protein kinase kinase kinase 5 6 -136919879 D84476 6q22.33 Hs.186486 108

MAPKKK cascade

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

ATP binding

protein amino acid phosphorylation

apoptosis

activation of JUN kinase activity

induction of apoptosis by extracellular signals

caspase activator activity

transferase activity

protein homodimerization activity

interspecies interaction between organisms

MAPK signaling pathway

Neurotrophin signaling pathway

Amyotrophic lateral sclerosis (ALS)

201681_s_at -1.145 7.124 -4.685 2.828e-04 0.052 0.584 DLG5 discs, large homolog 5 (Drosophila) 10 -79220554 AB011155 10q23 Hs.652690 49

protein binding

intracellular

cytoplasm

plasma membrane

cell-cell adherens junction

intracellular signaling cascade

negative regulation of cell proliferation

cell-cell adhesion

cell junction

receptor signaling complex scaffold activity

regulation of apoptosis

 
205417_s_at -0.560 9.122 -4.681 2.850e-04 0.052 0.577 DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1) 3 49482568 NM_004393 3p21 Hs.707131 Hs.76111 56

morphogenesis of an epithelial sheet

calcium ion binding

protein binding

extracellular region

basement membrane

extracellular space

membrane fraction

cytoplasm

integral to plasma membrane

protein complex assembly

muscle contraction

actin cytoskeleton

dystroglycan complex

sarcolemma

membrane raft

ECM-receptor interaction

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

204400_at 0.686 4.839 4.681 2.852e-04 0.052 0.576 EFS embryonal Fyn-associated substrate 14 -22895450 NM_005864 14q11.2-q12 Hs.24587 8

cytoplasm

cell adhesion

intracellular signaling cascade

SH3 domain binding

 
225665_at -0.722 11.862 -4.678 2.869e-04 0.052 0.571 ZAK sterile alpha motif and leucine zipper containing kinase AZK 2 173648810, 173648810 AI129320 2q24.2 Hs.444451 24

cell cycle checkpoint

DNA damage checkpoint

nucleotide binding

activation of MAPKK activity

magnesium ion binding

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

protein tyrosine kinase activity

ATP binding

nucleus

cytoplasm

response to stress

cell cycle

cell cycle arrest

protein kinase cascade

activation of JUN kinase activity

cell death

cell proliferation

response to radiation

transferase activity

cell differentiation

identical protein binding

positive regulation of apoptosis

MAPK signaling pathway

Tight junction

208752_x_at -0.816 9.727 -4.678 2.870e-04 0.052 0.570 NAP1L1 nucleosome assembly protein 1-like 1 12 -74724938 AI888672 12q21.2 Hs.524599 Hs.695185 17

protein binding

nucleus

chromatin assembly complex

DNA replication

nucleosome assembly

positive regulation of cell proliferation

melanosome

 
226879_at 0.482 6.393 4.676 2.880e-04 0.052 0.567 HVCN1 hydrogen voltage-gated channel 1 12 -109570873, -109570873 AW406569 12q24.11 Hs.211511 Hs.334637 11

voltage-gated ion channel activity

ion transport

response to pH

response to zinc ion

response to zinc ion

proton transport

membrane

integral to membrane

voltage-gated proton channel activity

voltage-gated proton channel activity

 
223041_at -0.776 7.409 -4.674 2.893e-04 0.052 0.563 CD99L2 CD99 molecule-like 2 X -149685466 AL136580 Xq28 Hs.522805 8

protein binding

plasma membrane

cell adhesion

integral to membrane

cell junction

 
220610_s_at -0.903 6.899 -4.665 2.942e-04 0.052 0.548 LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 3 -37069120 NM_006309 3p22.2 Hs.719246 7

protein binding

cellular_component

biological_process

Wnt receptor signaling pathway

LRR domain binding

 
228450_at 0.776 3.691 4.658 2.984e-04 0.052 0.535 PLEKHA7 pleckstrin homology domain containing, family A member 7 11 -16765787 AA758861 11p15.1 Hs.12332 4

protein binding

 
242323_at 0.769 8.505 4.657 2.991e-04 0.052 0.533 PLA2G12A phospholipase A2, group XIIA 4 -110850594 AV714268 4q25 Hs.389452 10

calcium ion binding

extracellular region

intracellular

cytoplasm

endoplasmic reticulum

Golgi apparatus

phospholipid metabolic process

biological_process

lipid catabolic process

hydrolase activity

calcium-dependent phospholipase A2 activity

Glycerophospholipid metabolism

Ether lipid metabolism

Arachidonic acid metabolism

Linoleic acid metabolism

alpha-Linolenic acid metabolism

Metabolic pathways

MAPK signaling pathway

Vascular smooth muscle contraction

VEGF signaling pathway

Fc epsilon RI signaling pathway

Long-term depression

GnRH signaling pathway

209212_s_at -1.317 6.219 -4.656 2.997e-04 0.052 0.531 KLF5 Kruppel-like factor 5 (intestinal) 13 72531142 AB030824 13q22.1 Hs.508234 50

angiogenesis

transcription factor activity

RNA polymerase II transcription factor activity

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

zinc ion binding

positive regulation of cell proliferation

microvillus assembly

positive regulation of transcription

metal ion binding

 
214461_at -2.842 4.182 -4.656 2.998e-04 0.052 0.530 LBP lipopolysaccharide binding protein 20 36408298 NM_004139 20q11.23-q12 Hs.154078 58

lipopolysaccharide binding

macrophage activation during immune response

receptor binding

extracellular region

extracellular region

extracellular space

extracellular space

nucleus

lipid transport

acute-phase response

acute-phase response

cellular defense response

opsonization

opsonization

lipid binding

lipopolysaccharide transport

lipopolysaccharide-mediated signaling pathway

detection of molecule of bacterial origin

response to lipopolysaccharide

negative regulation of tumor necrosis factor production

positive regulation of interleukin-6 production

positive regulation of interleukin-8 production

positive regulation of tumor necrosis factor production

positive regulation of tumor necrosis factor production

positive regulation of toll-like receptor 4 signaling pathway

positive regulation of macrophage activation

cell surface binding

innate immune response

innate immune response

defense response to Gram-negative bacterium

defense response to Gram-positive bacterium

defense response to Gram-positive bacterium

Gram-negative bacterial cell surface binding

Gram-negative bacterial cell surface binding

Gram-positive bacterial cell surface binding

positive regulation of respiratory burst during acute inflammatory response

Toll-like receptor signaling pathway

223652_at 1.266 6.104 4.655 3.001e-04 0.052 0.530 AS3MT arsenic (+3 oxidation state) methyltransferase 10 104619199 AF226730 10q24.32 Hs.34492 24

soluble fraction

cytoplasm

cytosol

metabolic process

methyltransferase activity

toxin metabolic process

transferase activity

arsonoacetate metabolic process

arsenite methyltransferase activity

methylarsonite methyltransferase activity

response to arsenic

 
223125_s_at -0.743 9.410 -4.654 3.008e-04 0.052 0.528 C1orf21 chromosome 1 open reading frame 21 1 182622772 AL563236 1q25 Hs.497159 Hs.719188 8    
206703_at -1.066 6.822 -4.650 3.034e-04 0.053 0.520 CHRNB1 cholinergic receptor, nicotinic, beta 1 (muscle) 17 7289129 NM_000747 17p13.1 Hs.330386 20

postsynaptic membrane organization

nicotinic acetylcholine-activated cation-selective channel activity

extracellular ligand-gated ion channel activity

protein binding

plasma membrane

nicotinic acetylcholine-gated receptor-channel complex

cation transport

muscle contraction

signal transduction

synaptic transmission, cholinergic

neuromuscular synaptic transmission

channel activity

acetylcholine receptor activity

cell junction

behavioral response to nicotine

regulation of membrane potential

synapse

postsynaptic membrane

muscle fiber development

neurological system process

 
242915_at 1.380 3.739 4.646 3.058e-04 0.053 0.512 ZNF682 zinc finger protein 682 19 -19976226, -19976226 AA603590 19p12 Hs.306298 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
224435_at 0.875 8.214 4.641 3.089e-04 0.053 0.503 C10orf58 chromosome 10 open reading frame 58 10 82158221, 82163570 BC005871 10q23.1 Hs.500333 Hs.718589 10

extracellular region

 
235049_at 0.771 5.891 4.640 3.092e-04 0.053 0.502 ADCY1 adenylate cyclase 1 (brain) 7 45580649 AA021120 7p13-p12 Hs.192215 24

nucleotide binding

magnesium ion binding

calmodulin binding

ATP binding

cAMP biosynthetic process

long-term memory

calcium- and calmodulin-responsive adenylate cyclase activity

hormone-mediated signaling

membrane

integral to membrane

Purine metabolism

Calcium signaling pathway

Chemokine signaling pathway

Vascular smooth muscle contraction

Gap junction

Long-term potentiation

GnRH signaling pathway

Melanogenesis

1557950_at -0.770 6.619 -4.639 3.097e-04 0.053 0.501 SDCCAG1 serologically defined colon cancer antigen 1 14 -49320281 BF984340 14q22 Hs.655964 8

nucleus

cytoplasm

 
224314_s_at -0.996 5.655 -4.626 3.184e-04 0.054 0.475 EGLN1 egl nine homolog 1 (C. elegans) 1 -229566120 AF277174 1q42.1 Hs.444450 Hs.710300 42

response to hypoxia

embryonic placenta development

iron ion binding

protein binding

cytosol

heart development

zinc ion binding

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

L-ascorbic acid binding

peptidyl-proline dioxygenase activity

oxygen homeostasis

negative regulation of transcription factor activity

metal ion binding

oxidation reduction

Pathways in cancer

Renal cell carcinoma

223681_s_at -1.634 8.420 -4.624 3.191e-04 0.054 0.473 INADL InaD-like (Drosophila) 1 61980736 AB044807 1p31.3 Hs.478125 24

protein binding

cellular_component

plasma membrane

tight junction

intracellular signaling cascade

apical plasma membrane

cell junction

Tight junction

224743_at -0.934 8.892 -4.621 3.211e-04 0.054 0.468 IMPAD1 inositol monophosphatase domain containing 1 8 -58033041 BF674724 8q12.1 Hs.716471 4

magnesium ion binding

inositol-1(or 4)-monophosphatase activity

membrane

integral to membrane

hydrolase activity

 
221495_s_at -0.563 7.674 -4.620 3.219e-04 0.054 0.465 TCF25 transcription factor 25 (basic helix-loop-helix) 16 88467494 AF322111 16q24.3 Hs.415342 9

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

protein binding

nucleus

heart development

regulation of transcription

 
230329_s_at 0.886 7.493 4.619 3.223e-04 0.054 0.464 NUDT6 nudix (nucleoside diphosphate linked moiety X)-type motif 6 4 -124033248, -124033248 AI580268 4q26 Hs.558459 15

cellular_component

growth factor activity

biological_process

hydrolase activity

 
225379_at -0.672 8.104 -4.617 3.241e-04 0.054 0.459 MAPT microtubule-associated protein tau 17 41327543 AA199717 17q21.1 Hs.101174 545

microtubule cytoskeleton organization

microtubule cytoskeleton organization

structural constituent of cytoskeleton

cytoplasm

cytosol

cytoskeleton

microtubule

microtubule associated complex

plasma membrane

plasma membrane

negative regulation of microtubule depolymerization

microtubule binding

microtubule binding

lipoprotein binding

SH3 domain binding

enzyme binding

axon

axon

growth cone

growth cone

positive regulation of microtubule polymerization

positive regulation of microtubule polymerization

apolipoprotein E binding

identical protein binding

cell projection

tubulin complex

tubulin complex

positive regulation of axon extension

positive regulation of axon extension

generation of neurons

MAPK signaling pathway

Alzheimer's disease

203269_at -0.491 8.020 -4.616 3.247e-04 0.054 0.457 NSMAF neutral sphingomyelinase (N-SMase) activation associated factor 8 -59658619, -59658619 NM_003580 8q12-q13 Hs.372000 8

receptor signaling protein activity

soluble fraction

cytoplasm

ceramide metabolic process

signal transduction

 
203360_s_at -1.007 6.026 -4.602 3.340e-04 0.055 0.432 MYCBP c-myc binding protein 1 -39101222 D50692 1p33-p32.2 Hs.591506 12

transcription coactivator activity

protein binding

nucleus

cytoplasm

mitochondrion

spermatogenesis

regulation of transcription

 
33850_at -0.623 8.659 -4.601 3.347e-04 0.055 0.430 MAP4 microtubule-associated protein 4 3 -47989573, -47867183, -47867183 W28892 3p21 Hs.517949 40

structural molecule activity

protein binding

microtubule

microtubule associated complex

negative regulation of microtubule depolymerization

 
203913_s_at -0.697 2.683 -4.595 3.388e-04 0.056 0.419 HPGD hydroxyprostaglandin dehydrogenase 15-(NAD) 4 -175647902, -175647902 AL574184 4q34-q35 Hs.596913 47

prostaglandin E receptor activity

binding

nucleus

nucleolus

cytoplasm

cytosol

lipid metabolic process

fatty acid metabolic process

prostaglandin metabolic process

transforming growth factor beta receptor signaling pathway

female pregnancy

parturition

15-hydroxyprostaglandin dehydrogenase (NAD+) activity

oxidoreductase activity

lipoxygenase pathway

protein homodimerization activity

negative regulation of cell cycle

NAD or NADH binding

oxidation reduction

 
222258_s_at -1.211 5.744 -4.591 3.415e-04 0.056 0.411 SH3BP4 SH3-domain binding protein 4 2 235525366 AF015043 2q37.1-q37.2 Hs.516777 12

molecular_function

signal transducer activity

protein binding

cellular_component

nucleus

coated pit

endocytosis

cell cycle

biological_process

membrane

clathrin-coated vesicle

cytoplasmic vesicle

 
219464_at 1.331 7.403 4.589 3.425e-04 0.056 0.409 CA14 carbonic anhydrase XIV 1 148496841 NM_012113 1q21 Hs.528988 11

carbonate dehydratase activity

zinc ion binding

membrane

integral to membrane

lyase activity

metal ion binding

Nitrogen metabolism

212470_at -0.717 8.166 -4.585 3.454e-04 0.056 0.401 SPAG9 sperm associated antigen 9 17 -46394534 AB011088 17q21.33 Hs.463439 22

acrosomal vesicle

protein binding

cytoplasm

spermatogenesis

integral to membrane

positive regulation of cell migration

perinuclear region of cytoplasm

 
214152_at -0.696 7.299 -4.584 3.461e-04 0.056 0.399 CCPG1 cell cycle progression 1 15 -53434729, -53434729 AU144243 15q21.1 Hs.285051 5

cell cycle

membrane

integral to membrane

 
226065_at 0.769 6.761 4.584 3.461e-04 0.056 0.399 PRICKLE1 prickle homolog 1 (Drosophila) 12 -41138407, -41138407, -41138407 N98595 12q12 Hs.524348 Hs.639400 14

nucleus

cytoplasm

cytosol

zinc ion binding

membrane

nuclear membrane

metal ion binding

Wnt signaling pathway

221838_at 0.502 4.960 4.583 3.465e-04 0.056 0.398 KLHL22 kelch-like 22 (Drosophila) 22 -19125805 N38751 22q11.21 Hs.517419 6

protein binding

 
229310_at -1.435 5.992 -4.581 3.483e-04 0.056 0.393 KLHL29 kelch-like 29 (Drosophila) 2   BE465475 2p24.1 Hs.130593 5

protein binding

 
202381_at -0.731 7.704 -4.579 3.494e-04 0.056 0.390 ADAM9 ADAM metallopeptidase domain 9 (meltrin gamma) 8 38973661, 38973661 NM_003816 8p11.22 Hs.591852 36

activation of MAPKK activity

metalloendopeptidase activity

protein kinase C binding

integrin binding

integrin binding

integrin binding

collagen binding

extracellular region

extracellular space

cytoplasm

plasma membrane

proteolysis

response to oxidative stress

cell-matrix adhesion

transforming growth factor beta receptor signaling pathway

integrin-mediated signaling pathway

peptidase activity

zinc ion binding

cell surface

response to manganese ion

integral to membrane

SH3 domain binding

SH3 domain binding

keratinocyte differentiation

intrinsic to external side of plasma membrane

positive regulation of cell adhesion mediated by integrin

cell-cell adhesion mediated by integrin

positive regulation of macrophage fusion

response to tumor necrosis factor

monocyte activation

response to hydrogen peroxide

laminin binding

metal ion binding

positive regulation of protein secretion

positive regulation of membrane protein ectodomain proteolysis

PMA-inducible membrane protein ectodomain proteolysis

response to glucocorticoid stimulus

positive regulation of keratinocyte migration

response to calcium ion

 
213245_at 0.973 5.967 4.578 3.502e-04 0.056 0.388 ADCY1 adenylate cyclase 1 (brain) 7 45580649 AL120173 7p13-p12 Hs.192215 24

nucleotide binding

magnesium ion binding

calmodulin binding

ATP binding

cAMP biosynthetic process

long-term memory

calcium- and calmodulin-responsive adenylate cyclase activity

hormone-mediated signaling

membrane

integral to membrane

Purine metabolism

Calcium signaling pathway

Chemokine signaling pathway

Vascular smooth muscle contraction

Gap junction

Long-term potentiation

GnRH signaling pathway

Melanogenesis

208840_s_at -1.236 6.285 -4.578 3.503e-04 0.056 0.388 G3BP2 GTPase activating protein (SH3 domain) binding protein 2 4 -76786976, -76786976 AU149503 4q21.1 Hs.303676 15

nucleotide binding

RNA binding

protein binding

intracellular

cytoplasm

transport

cytoplasmic sequestering of NF-kappaB

Ras protein signal transduction

receptor signaling complex scaffold activity

mRNA transport

 
208029_s_at -1.441 8.976 -4.577 3.510e-04 0.056 0.386 LAPTM4B lysosomal protein transmembrane 4 beta 8 98856984 NM_018407 8q22.1 Hs.492314 17

transport

endomembrane system

membrane

integral to membrane

Lysosome

222736_s_at -0.925 6.886 -4.575 3.525e-04 0.056 0.382 TMEM38B transmembrane protein 38B 9 107496645 BC000049 9q31.2 Hs.411925 5

potassium channel activity

endoplasmic reticulum

ion transport

potassium ion transport

membrane

integral to membrane

potassium ion binding

nuclear membrane

sarcoplasmic reticulum membrane

 
228702_at -1.450 7.814 -4.570 3.557e-04 0.056 0.374 FLJ43663 hypothetical LOC378805 7 -130279458, -130279458 AL569506 7q32.3 Hs.150556 Hs.649308 2    
219024_at -0.994 6.599 -4.569 3.562e-04 0.056 0.373 PLEKHA1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 10 124124209, 124141832 NM_021622 10q26.13 Hs.643512 16

phospholipid binding

cellular_component

nucleus

cytoplasm

plasma membrane

biological_process

 
214151_s_at -0.736 7.368 -4.567 3.581e-04 0.056 0.368 CCPG1 cell cycle progression 1 15 -53434729, -53434729 AU144243 15q21.1 Hs.285051 5

cell cycle

membrane

integral to membrane

 
238841_at 0.627 5.301 4.566 3.583e-04 0.056 0.367 PTPDC1 protein tyrosine phosphatase domain containing 1 9 95832896, 95886566 AA651920 9q22.32 Hs.437943 2

protein tyrosine phosphatase activity

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

 
200830_at -0.520 9.581 -4.566 3.588e-04 0.056 0.366 PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 3 185499715 NM_002808 3q27.1 Hs.518464 45

proteasome complex

protein binding

cytosol

proteasome regulatory particle

enzyme regulator activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

regulation of protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

231773_at -1.329 7.221 -4.565 3.594e-04 0.056 0.365 ANGPTL1 angiopoietin-like 1 1 -177085292 BF002046 1q25.2 Hs.591474 19

receptor binding

extracellular region

extracellular space

signal transduction

 
235653_s_at -1.096 5.193 -4.561 3.620e-04 0.056 0.358 THAP6 THAP domain containing 6 4 76658677 BF685315 4q21.1 Hs.479971 10

DNA binding

zinc ion binding

microtubule cytoskeleton

metal ion binding

 
203282_at -0.836 10.895 -4.559 3.638e-04 0.056 0.353 GBE1 glucan (1,4-alpha-), branching enzyme 1 3 -81621539 NM_000158 3p12.3 Hs.436062 20

1,4-alpha-glucan branching enzyme activity

1,4-alpha-glucan branching enzyme activity

hydrolase activity, hydrolyzing O-glycosyl compounds

cytosol

carbohydrate metabolic process

glycogen biosynthetic process

generation of precursor metabolites and energy

transferase activity, transferring glycosyl groups

cation binding

Starch and sucrose metabolism

Metabolic pathways

202753_at -0.440 9.889 -4.554 3.673e-04 0.056 0.345 PSMD6 proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 3 -63971270 NM_014814 3p14.1 Hs.152536 35

proteasome complex

protein binding

cytosol

proteolysis

ATPase activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

225398_at -0.977 9.382 -4.552 3.686e-04 0.056 0.342 RPUSD4 RNA pseudouridylate synthase domain containing 4 11 -125577199 AL580514 11q24.2 Hs.150458 5

pseudouridine synthesis

RNA binding

pseudouridine synthase activity

 
203405_at -0.822 6.521 -4.551 3.693e-04 0.056 0.340 PSMG1 proteasome (prosome, macropain) assembly chaperone 1 21 -39469253 NM_003720 21q22.3 Hs.473838 12

protein binding

cytoplasm

endoplasmic reticulum

proteasome assembly

 
220235_s_at -1.162 6.973 -4.550 3.702e-04 0.056 0.338 C1orf103 chromosome 1 open reading frame 103 1 -111291334 NM_018372 1p13.3 Hs.25245 7

protein binding

 
204204_at -0.980 6.238 -4.550 3.703e-04 0.056 0.337 SLC31A2 solute carrier family 31 (copper transporters), member 2 9 114953058 NM_001860 9q31-q32 Hs.24030 7

copper ion transmembrane transporter activity

copper ion binding

integral to plasma membrane

ion transport

copper ion transport

membrane

 
212248_at -0.637 8.201 -4.539 3.788e-04 0.058 0.316 MTDH metadherin 8 98725582 AI886796 8q22.1 Hs.377155 23

negative regulation of transcription from RNA polymerase II promoter

protein binding

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

tight junction

membrane

integral to membrane

cell junction

nuclear membrane

perinuclear region of cytoplasm

NF-kappaB binding

positive regulation of NF-kappaB transcription factor activity

 
218534_s_at -0.844 6.554 -4.535 3.814e-04 0.058 0.310 AGGF1 angiogenic factor with G patch and FHA domains 1 5 76361987 NM_018046 5q13.3 Hs.634849 12

vasculogenesis

positive regulation of endothelial cell proliferation

nucleic acid binding

protein binding

extracellular region

intracellular

cytoplasm

RNA processing

cell adhesion

multicellular organismal development

eukaryotic cell surface binding

positive regulation of angiogenesis

perinuclear region of cytoplasm

 
217975_at 0.814 7.011 4.532 3.837e-04 0.058 0.305 WBP5 WW domain binding protein 5 X 102498035 NM_016303 Xq22.2 Hs.533287 6

protein binding

WW domain binding

 
205842_s_at -1.224 5.011 -4.530 3.858e-04 0.058 0.300 JAK2 Janus kinase 2 9 4975244 AF001362 9p24 Hs.656213 588

nucleotide binding

non-membrane spanning protein tyrosine kinase activity

Janus kinase activity

receptor binding

growth hormone receptor binding

interleukin-12 receptor binding

ATP binding

nucleus

cytoplasm

cytoskeleton

caveola

apoptosis

cell motion

enzyme linked receptor protein signaling pathway

tyrosine phosphorylation of STAT protein

STAT protein nuclear translocation

mesoderm development

negative regulation of cell proliferation

positive regulation of phosphoinositide 3-kinase cascade

membrane

transferase activity

myeloid cell differentiation

SH2 domain binding

positive regulation of tyrosine phosphorylation of Stat3 protein

positive regulation of tyrosine phosphorylation of Stat5 protein

negative regulation of DNA binding

response to antibiotic

positive regulation of peptidyl-tyrosine phosphorylation

JAK-STAT cascade involved in growth hormone signaling pathway

positive regulation of growth hormone receptor signaling pathway

Chemokine signaling pathway

Jak-STAT signaling pathway

Adipocytokine signaling pathway

207551_s_at -0.653 7.380 -4.528 3.868e-04 0.058 0.297 MSL3 male-specific lethal 3 homolog (Drosophila) X 11686198, 11686198, 11687681 NM_006800 Xp22.3 Hs.655288 6

chromatin

chromatin binding

transcription factor activity

nucleus

chromatin assembly or disassembly

transcription from RNA polymerase II promoter

multicellular organismal development

chromatin modification

regulation of transcription

 
210694_s_at 0.796 5.799 4.526 3.887e-04 0.058 0.293 MID1 midline 1 (Opitz/BBB syndrome) X -10373595, -10373595, -10373595 AF041209 Xp22 Hs.27695 38

microtubule cytoskeleton organization

protein binding

intracellular

cytoplasm

microtubule

microtubule associated complex

negative regulation of microtubule depolymerization

pattern specification process

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

Ubiquitin mediated proteolysis

207001_x_at -0.808 6.615 -4.517 3.954e-04 0.059 0.277 TSC22D3 TSC22 domain family, member 3 X -106843107, -106843107, -106843107 NM_004089 Xq22.3 Hs.716410 24

transcription factor activity

regulation of transcription, DNA-dependent

 
203359_s_at -0.964 6.336 -4.514 3.981e-04 0.059 0.271 MYCBP c-myc binding protein 1 -39101222 AL525412 1p33-p32.2 Hs.591506 12

transcription coactivator activity

protein binding

nucleus

cytoplasm

mitochondrion

spermatogenesis

regulation of transcription

 
212253_x_at -0.563 7.883 -4.513 3.985e-04 0.059 0.270 DST dystonin 6 -56587338, -56576527, -56430743, -56430743, -56430743, -56430743, -56430743 BG253119 6p12.1 Hs.631992 Hs.669931 48

actin binding

integrin binding

calcium ion binding

protein binding

protein binding

basement membrane

cytoplasm

cytoplasm

cytoskeleton

cell cycle arrest

cell adhesion

integrin-mediated signaling pathway

protein C-terminus binding

cytoplasmic membrane-bounded vesicle

actin cytoskeleton organization

hemidesmosome

intermediate filament cytoskeleton organization

intermediate filament cytoskeleton organization

intermediate filament cytoskeleton organization

actin filament binding

 
229287_at -0.683 7.423 -4.512 3.995e-04 0.059 0.268 PCNX pecanex homolog (Drosophila) 14 70443874 BE326214 14q24.2 Hs.446559 10

membrane

integral to membrane

 
203912_s_at -0.729 9.011 -4.509 4.020e-04 0.059 0.262 DNASE1L1 deoxyribonuclease I-like 1 X -153282772, -153282772 NM_006730 Xq28 Hs.401929 14

DNA binding

endonuclease activity

deoxyribonuclease activity

endoplasmic reticulum

DNA catabolic process

hydrolase activity

 
202500_at -0.518 8.154 -4.504 4.065e-04 0.059 0.252 DNAJB2 DnaJ (Hsp40) homolog, subfamily B, member 2 2 219852283 NM_006736 2q32-q34 Hs.77768 17

protein folding

response to unfolded protein

heat shock protein binding

unfolded protein binding

 
243_g_at -0.922 9.788 -4.503 4.067e-04 0.059 0.251 MAP4 microtubule-associated protein 4 3 -47989573, -47867183, -47867183 M64571 3p21 Hs.517949 40

structural molecule activity

protein binding

microtubule

microtubule associated complex

negative regulation of microtubule depolymerization

 
202003_s_at 0.949 10.017 4.503 4.073e-04 0.059 0.250 ACAA2 acetyl-Coenzyme A acyltransferase 2 18 -45563871 NM_006111 18q21.1 Hs.200136 10

acetyl-CoA C-acyltransferase activity

mitochondrion

mitochondrial inner membrane

lipid metabolic process

fatty acid metabolic process

cholesterol biosynthetic process

metabolic process

acyltransferase activity

transferase activity

Fatty acid elongation in mitochondria

Fatty acid metabolism

Valine, leucine and isoleucine degradation

Metabolic pathways

227198_at 2.701 4.681 4.503 4.074e-04 0.059 0.250 AFF3 AF4/FMR2 family, member 3 2 -99530147, -99530147 AW085505 2q11.2-q12 Hs.444414 16

DNA binding

nucleus

multicellular organismal development

regulation of transcription

 
203192_at -0.757 6.466 -4.500 4.097e-04 0.059 0.245 ABCB6 ATP-binding cassette, sub-family B (MDR/TAP), member 6 2 -219782737 NM_005689 2q36 Hs.107911 15

nucleotide binding

ATP binding

mitochondrion

mitochondrial envelope

mitochondrial outer membrane

transport

cellular iron ion homeostasis

membrane

integral to membrane

ATPase activity

ATPase activity, coupled to transmembrane movement of substances

ATP-binding cassette (ABC) transporter complex

ABC transporters

209896_s_at -1.779 6.546 -4.491 4.172e-04 0.060 0.228 PTPN11 protein tyrosine phosphatase, non-receptor type 11 12 111340918 AF119855 12q24 Hs.506852 Hs.646231 326

non-membrane spanning protein tyrosine phosphatase activity

non-membrane spanning protein tyrosine phosphatase activity

protein binding

cytoplasm

cytosol

protein amino acid dephosphorylation

signal transduction

hydrolase activity

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Adipocytokine signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

Renal cell carcinoma

Chronic myeloid leukemia

228863_at 0.891 4.329 4.491 4.172e-04 0.060 0.228 PCDH17 protocadherin 17 13 57103789 N69091 13q21.1 Hs.106511 11

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

 
213789_at 0.472 5.459 4.488 4.193e-04 0.060 0.224 EBP emopamil binding protein (sterol isomerase) X 48265107 N58493 Xp11.23-p11.22 Hs.30619 19

C-8 sterol isomerase activity

skeletal system development

steroid delta-isomerase activity

transmembrane receptor activity

endoplasmic reticulum

microsome

integral to plasma membrane

cholesterol biosynthetic process

drug transporter activity

membrane

isomerase activity

hemopoiesis

cholestenol delta-isomerase activity

Steroid biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

219926_at -0.729 10.266 -4.487 4.200e-04 0.060 0.222 POPDC3 popeye domain containing 3 6 -105712475, -105712475 NM_022361 6q21 Hs.458336 7

molecular_function

biological_process

membrane

integral to membrane

 
239012_at -1.494 7.441 -4.484 4.231e-04 0.061 0.215 RNF144B ring finger protein 144B 6 18495572 R83905 6p22.3 Hs.148741 6

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

apoptosis

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

protein ubiquitination during ubiquitin-dependent protein catabolic process

metal ion binding

 
212967_x_at -0.681 9.824 -4.482 4.245e-04 0.061 0.212 NAP1L1 nucleosome assembly protein 1-like 1 12 -74724938 AW148801 12q21.2 Hs.524599 Hs.695185 17

protein binding

nucleus

chromatin assembly complex

DNA replication

nucleosome assembly

positive regulation of cell proliferation

melanosome

 
222664_at -0.609 5.271 -4.479 4.274e-04 0.061 0.206 KCTD15 potassium channel tetramerisation domain containing 15 19 38979590 AI808448 19q13.11 Hs.221873 Hs.606506 12

voltage-gated potassium channel activity

protein binding

potassium ion transport

voltage-gated potassium channel complex

membrane

 
200931_s_at -0.907 10.478 -4.474 4.316e-04 0.061 0.197 VCL vinculin 10 75427877 NM_014000 10q22.2 Hs.643896 78

actin binding

structural molecule activity

cytoplasm

plasma membrane

cell-cell junction

adherens junction

focal adhesion

cell motion

cell adhesion

actin cytoskeleton

oxidoreductase activity

lamellipodium assembly

cell-substrate junction

negative regulation of cell migration

costamere

protein complex

apical junction assembly

alpha-catenin binding

Focal adhesion

Adherens junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

212742_at -1.063 9.480 -4.470 4.353e-04 0.061 0.189 RNF115 ring finger protein 115 1 144322392 AL530462 1q21.1 Hs.523550 8

protein binding

zinc ion binding

metal ion binding

 
212861_at -0.591 6.426 -4.460 4.437e-04 0.062 0.172 MFSD5 major facilitator superfamily domain containing 5 12 51932146 BF690150 12q13.13 Hs.654660 7

transport

membrane

integral to membrane

 
209605_at 0.961 8.090 4.455 4.483e-04 0.063 0.162 TST thiosulfate sulfurtransferase (rhodanese) 22 -35736851 D87292 22q13.1 Hs.474783 25

thiosulfate sulfurtransferase activity

mitochondrion

mitochondrial matrix

plasma membrane

sulfate transport

cyanate catabolic process

transferase activity

 
210788_s_at -0.843 10.280 -4.453 4.505e-04 0.063 0.158 DHRS7 dehydrogenase/reductase (SDR family) member 7 14 -59681251 AF126782 14q23.1 Hs.59719 7

binding

oxidoreductase activity

oxidation reduction

 
202760_s_at 1.597 6.045 4.451 4.519e-04 0.063 0.155 PALM2-AKAP2 PALM2-AKAP2 readthrough transcript 9 111582397, 111582409 NM_007203 9q31-q33 Hs.591908 8    
204219_s_at -0.542 10.248 -4.450 4.532e-04 0.063 0.152 PSMC1 proteasome (prosome, macropain) 26S subunit, ATPase, 1 14 89792646 NM_002802 14q32.11 Hs.356654 51

nucleotide binding

proteasome complex

protein binding

ATP binding

nucleus

nucleolus

cytoplasm

cytosol

hydrolase activity

ATPase activity

protein catabolic process

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

210091_s_at -0.671 7.854 -4.449 4.534e-04 0.063 0.152 DTNA dystrobrevin, alpha 18 30327251, 30327251, 30327251, 30427279, 30544193, 30589937, 30589937, 30652299, 30652299 U46745 18q12 Hs.643454 38

calcium ion binding

protein binding

cytoplasm

striated muscle contraction

signal transduction

neuromuscular synaptic transmission

zinc ion binding

cell junction

synapse

 
227792_at -0.606 7.361 -4.448 4.544e-04 0.063 0.150 ITPRIPL2 inositol 1,4,5-triphosphate receptor interacting protein-like 2 16 19032754 AA490685 16p12.3 Hs.530899 Hs.648523 3

membrane

integral to membrane

 
209345_s_at -0.504 5.779 -4.446 4.560e-04 0.063 0.147 PI4K2A phosphatidylinositol 4-kinase type 2 alpha 10 99390432 AL561930 10q24 Hs.25300 18

nucleotide binding

magnesium ion binding

1-phosphatidylinositol 4-kinase activity

protein binding

ATP binding

cytoplasm

integral to plasma membrane

phosphatidylinositol biosynthetic process

membrane

kinase activity

transferase activity

membrane raft

 
229377_at -0.705 5.872 -4.441 4.611e-04 0.063 0.137 GRTP1 growth hormone regulated TBC protein 1 13 -113026505 BF001483 13q34 Hs.170904 3

GTPase activator activity

Rab GTPase activator activity

intracellular

regulation of Rab GTPase activity

 
225419_at -0.399 6.913 -4.440 4.620e-04 0.063 0.135 C7orf11 chromosome 7 open reading frame 11 7 -40138866 AI869704 7p14.1 Hs.654989 9

nucleus

 
203244_at -0.612 8.432 -4.438 4.637e-04 0.063 0.131 PEX5 peroxisomal biogenesis factor 5 12 7233025, 7233548, 7234224 NM_000319 12p13.31 Hs.567327 45

protein binding

cytoplasm

peroxisome

protein transport

membrane

 
224818_at -0.679 8.719 -4.432 4.692e-04 0.064 0.121 SORT1 sortilin 1 1 -109653714 BE622952 1p21.3-p13.1 Hs.485195 Hs.703487 47

ossification

receptor activity

nucleus

lysosome

early endosome

endoplasmic reticulum

microsome

Golgi apparatus

plasma membrane

coated pit

transport

Golgi to endosome transport

endocytosis

neuropeptide signaling pathway

multicellular organismal development

endosome to lysosome transport

induction of apoptosis by extracellular signals

cell surface

nerve growth factor receptor activity

regulation of gene expression

myotube differentiation

integral to membrane

cytoplasmic membrane-bounded vesicle

vesicle organization

enzyme binding

clathrin-coated vesicle

cell differentiation

neurotensin receptor activity, non-G-protein coupled

endosome transport via multivesicular body sorting pathway

response to insulin stimulus

negative regulation of apoptosis

glucose import

nerve growth factor receptor signaling pathway

plasma membrane to endosome transport

nerve growth factor binding

perinuclear region of cytoplasm

negative regulation of lipoprotein lipase activity

Lysosome

Neurotrophin signaling pathway

212551_at -0.725 11.501 -4.432 4.697e-04 0.064 0.120 CAP2 CAP, adenylate cyclase-associated protein, 2 (yeast) 6 17501714 NM_006366 6p22.3 Hs.132902 7

actin binding

binding

plasma membrane

cytoskeleton organization

establishment or maintenance of cell polarity

signal transduction

activation of adenylate cyclase activity

 
204311_at 0.531 5.735 4.429 4.726e-04 0.064 0.114 ATP1B2 ATPase, Na+/K+ transporting, beta 2 polypeptide 17 7494978 NM_001678 17p13.1 Hs.712542 22

sodium:potassium-exchanging ATPase activity

protein binding

ATP biosynthetic process

ion transport

potassium ion transport

sodium ion transport

membrane

integral to membrane

potassium ion binding

sodium ion binding

Cardiac muscle contraction

1552301_a_at -0.856 10.094 -4.428 4.737e-04 0.064 0.112 CORO6 coronin 6 17 -24965899 NM_032854 17q11.2 Hs.143046 7    
206976_s_at -1.110 8.022 -4.424 4.774e-04 0.064 0.105 HSPH1 heat shock 105kDa/110kDa protein 1 13 -30608762 NM_006644 13q12.3 Hs.36927 25

nucleotide binding

ATP binding

cytoplasm

response to unfolded protein

 
201662_s_at -0.958 7.577 -4.424 4.775e-04 0.064 0.105 ACSL3 acyl-CoA synthetase long-chain family member 3 2 223433975 D89053 2q34-q35 Hs.655772 20

nucleotide binding

magnesium ion binding

fatty-acyl-CoA synthase activity

long-chain-fatty-acid-CoA ligase activity

protein binding

ATP binding

mitochondrion

mitochondrial outer membrane

peroxisome

endoplasmic reticulum

microsome

lipid metabolic process

fatty acid metabolic process

metabolic process

membrane

integral to membrane

ligase activity

Fatty acid metabolism

Metabolic pathways

PPAR signaling pathway

Adipocytokine signaling pathway

203403_s_at -1.034 8.283 -4.415 4.854e-04 0.064 0.089 RNF6 ring finger protein (C3H2C3 type) 6 13 -25684904, -25684904, -25684904 NM_005977 13q12.2 Hs.136885 7

protein binding

cellular_component

biological_process

zinc ion binding

metal ion binding

 
209020_at -0.700 7.971 -4.414 4.864e-04 0.064 0.088 C20orf111 chromosome 20 open reading frame 111 20 -42258549 AF217514 20q13.11 Hs.75798 6    
207076_s_at 1.793 7.831 4.414 4.873e-04 0.064 0.086 ASS1 argininosuccinate synthetase 1 9 132309914 NM_000050 9q34.1 Hs.160786 40

urea cycle

nucleotide binding

argininosuccinate synthase activity

protein binding

ATP binding

cytoplasm

arginine biosynthetic process

cellular amino acid biosynthetic process

ligase activity

Alanine, aspartate and glutamate metabolism

Arginine and proline metabolism

Metabolic pathways

212003_at -0.485 6.891 -4.412 4.893e-04 0.064 0.082 C1orf144 chromosome 1 open reading frame 144 1 16566169 BG171020 1p36.13 Hs.252967 2    
209412_at -0.717 6.010 -4.411 4.896e-04 0.064 0.082 TRAPPC10 trafficking protein particle complex 10 21 44256633 U61500 21q22.3 Hs.126221 12

Golgi apparatus

sodium ion transport

sodium ion transmembrane transporter activity

integral to membrane

vesicle-mediated transport

 
230619_at -0.472 6.369 -4.407 4.940e-04 0.065 0.073 ARNT aryl hydrocarbon receptor nuclear translocator 1 -149048809 AI768497 1q21 Hs.632446 88

response to hypoxia

positive regulation of endothelial cell proliferation

RNA polymerase II transcription factor activity, enhancer binding

transcription coactivator activity

signal transducer activity

nucleus

regulation of transcription, DNA-dependent

signal transduction

positive regulation vascular endothelial growth factor production

aryl hydrocarbon receptor binding

positive regulation of vascular endothelial growth factor receptor signaling pathway

mRNA transcription from RNA polymerase II promoter

positive regulation of gene-specific transcription

sequence-specific DNA binding

regulation of transcription from RNA polymerase II promoter in response to oxidative stress

positive regulation of erythrocyte differentiation

positive regulation of glycolysis

positive regulation of hormone biosynthetic process

protein heterodimerization activity

Pathways in cancer

Renal cell carcinoma

222156_x_at -0.838 6.792 -4.406 4.944e-04 0.065 0.073 CCPG1 cell cycle progression 1 15 -53434729, -53434729 AK022459 15q21.1 Hs.285051 5

cell cycle

membrane

integral to membrane

 
1556134_a_at -1.353 7.294 -4.405 4.961e-04 0.065 0.069 B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 3 184453725 BC013229 3q28 Hs.718506 7

intracellular

Golgi apparatus

protein amino acid glycosylation

multicellular organismal development

central nervous system development

galactosyltransferase activity

beta-galactosyl-N-acetylglucosaminylgalactosylglucosyl-ceramide beta-1,3-acetylglucosaminyltransferase activity

lipopolysaccharide N-acetylglucosaminyltransferase activity

glycolipid biosynthetic process

membrane

integral to membrane

transferase activity, transferring glycosyl groups

Glycosphingolipid biosynthesis - lacto and neolacto series

Metabolic pathways

213353_at -0.922 7.885 -4.403 4.974e-04 0.065 0.067 ABCA5 ATP-binding cassette, sub-family A (ABC1), member 5 17 -64752170, -64752170 BF693921 17q24.3 Hs.421474 11

nucleotide binding

ATP binding

lysosome

endosome

Golgi apparatus

transport

membrane

integral to membrane

ATPase activity

ABC transporters

1554600_s_at -0.643 7.290 -4.403 4.979e-04 0.065 0.066 LMNA lamin A/C 1 154351084, 154351084 BC033088 1q21.2-q21.3 Hs.594444 279

structural molecule activity

protein binding

nucleus

cytoplasm

intermediate filament

plasma membrane

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

232252_at -0.681 9.385 -4.401 4.994e-04 0.065 0.063 DUSP27 dual specificity phosphatase 27 (putative) 1 165330710 AI822125 1q22-q24 Hs.632462 2

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

phosphatase activity

 
217882_at -0.856 10.571 -4.399 5.015e-04 0.065 0.059 TMEM111 transmembrane protein 111 3 -9980635 NM_018447 3p25.3 Hs.475392 6

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
214039_s_at -1.068 11.019 -4.395 5.054e-04 0.065 0.052 LAPTM4B lysosomal protein transmembrane 4 beta 8 98856984 T15777 8q22.1 Hs.492314 17

transport

endomembrane system

membrane

integral to membrane

Lysosome

222436_s_at -0.456 8.492 -4.395 5.061e-04 0.065 0.051 VPS24 vacuolar protein sorting 24 homolog (S. cerevisiae) 2 -86584063 AF219226 2p24.3-p24.1 Hs.591582 25

protein binding

cytoplasm

endosome

cytosol

cell cycle

protein transport

membrane

late endosome membrane

cell division

Endocytosis

219233_s_at 0.413 5.366 4.392 5.091e-04 0.065 0.046 GSDMB gasdermin B 17 -35314373, -35314373 NM_018530 17q12 Hs.306777 12

cytoplasm

 
225819_at -0.751 5.926 -4.391 5.098e-04 0.065 0.044 TBRG1 transforming growth factor beta regulator 1 11 123997951 AA576946 11q24.2 Hs.436410 11

DNA binding

protein binding

nucleus

DNA replication

cell cycle

cell cycle arrest

negative regulation of cell proliferation

nucleolus to nucleoplasm transport

protein stabilization

 
49329_at 0.406 6.655 4.387 5.137e-04 0.065 0.038 KLHL22 kelch-like 22 (Drosophila) 22 -19125805 N38751 22q11.21 Hs.517419 6

protein binding

 
219418_at -0.597 6.396 -4.384 5.169e-04 0.066 0.032 NHEJ1 nonhomologous end-joining factor 1 2 -219648289 NM_024782 2q35 Hs.225988 27

DNA binding

nucleus

DNA repair

double-strand break repair via nonhomologous end joining

response to DNA damage stimulus

central nervous system development

response to ionizing radiation

B cell differentiation

T cell differentiation

identical protein binding

positive regulation of ligase activity

Non-homologous end-joining

242794_at 0.772 3.715 4.383 5.187e-04 0.066 0.029 MAML3 mastermind-like 3 (Drosophila) 4 -140856995 AI569476 4q28 Hs.586165 7

transcription coactivator activity

nucleus

Notch signaling pathway

nuclear speck

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

Notch signaling pathway

239763_at 0.446 5.742 4.381 5.203e-04 0.066 0.026 PRDM11 PR domain containing 11 11 45072139 AA157112 11p11 Hs.178715 3    
213174_at -0.670 6.200 -4.380 5.215e-04 0.066 0.024 TTC9 tetratricopeptide repeat domain 9 14 70178256 BE675549 14q24.2 Hs.79170 5

binding

protein folding

 
222991_s_at -0.832 7.157 -4.379 5.220e-04 0.066 0.023 UBQLN1 ubiquilin 1 9 -85464697 AL136643 9q21.2-q21.3 9q22 Hs.9589 46

nucleus

cytoplasm

cytosol

kinase binding

protein complex

perinuclear region of cytoplasm

 
225701_at 0.603 5.259 4.379 5.230e-04 0.066 0.021 AKNA AT-hook transcription factor 9 -116136254 AK024431 9q32 Hs.494895 5

DNA binding

nucleus

regulation of transcription

 
219225_at -0.580 5.549 -4.377 5.246e-04 0.066 0.018 PGBD5 piggyBac transposable element derived 5 1 -228524014 NM_024554 1q42.13 Hs.520463 3

membrane

integral to membrane

 
224865_at -0.500 6.929 -4.375 5.268e-04 0.066 0.014 FAR1 fatty acyl CoA reductase 1 11 13646781 N63551 11p15.2 Hs.501991 10

protein binding

peroxisome

lipid biosynthetic process

membrane

integral to membrane

oxidoreductase activity

oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor

oxidation reduction

 
225833_at -0.788 4.188 -4.374 5.275e-04 0.066 0.013 DAGLB diacylglycerol lipase, beta 7 -6415272 BE795104 7p22.1 Hs.487498 9

triacylglycerol lipase activity

calcium ion binding

plasma membrane

integral to membrane

lipid catabolic process

hydrolase activity

 
235867_at -0.980 6.134 -4.373 5.285e-04 0.066 0.012 GSTM3 glutathione S-transferase mu 3 (brain) 1 -110078076 AI459140 1p13.3 Hs.2006 96

glutathione transferase activity

cytoplasm

establishment of blood-nerve barrier

metabolic process

transferase activity

identical protein binding

response to estrogen stimulus

Glutathione metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

201198_s_at -0.742 8.426 -4.373 5.290e-04 0.066 0.011 PSMD1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 2 231629852 AI860431 2q37.1 Hs.3887 43

proteasome complex

protein binding

cytosol

proteasome regulatory particle

enzyme regulator activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

regulation of protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

240289_at -1.593 7.611 -4.371 5.314e-04 0.066 0.007 LOC100131683 hypothetical protein LOC100131683 4   W86910 4q35.1 Hs.442702      
239390_at -0.605 5.653 -4.366 5.365e-04 0.066 -0.002 GTDC1 glycosyltransferase-like domain containing 1 2 -144420052, -144420050 BE327650 2q22.3 Hs.44780 3

biosynthetic process

transferase activity, transferring glycosyl groups

 
210011_s_at -0.342 6.699 -4.361 5.416e-04 0.067 -0.011 EWSR1 Ewing sarcoma breakpoint region 1 22 27993997, 27993997 BC000527 22q12.2 Hs.374477 90

nucleotide binding

RNA binding

calmodulin binding

intracellular

nucleus

cytoplasm

plasma membrane

zinc ion binding

regulation of transcription

metal ion binding

 
214959_s_at -0.794 4.404 -4.361 5.420e-04 0.067 -0.012 API5 apoptosis inhibitor 5 11 43290080 AF229253 11p11.2 Hs.435771 15

binding

nucleus

spliceosomal complex

cytoplasm

apoptosis

anti-apoptosis

anti-apoptosis

anti-apoptosis

fibroblast growth factor binding

 
200962_at 1.152 5.997 4.361 5.424e-04 0.067 -0.012 RPL31 ribosomal protein L31 2 100985122, 100985122 AI348010 2q11.2 Hs.469473 21

RNA binding

structural constituent of ribosome

protein binding

intracellular

cytosol

ribosome

translational elongation

cytosolic large ribosomal subunit

Ribosome

231875_at -1.044 4.875 -4.358 5.449e-04 0.067 -0.017 KIF21A kinesin family member 21A 12 -37973296 AF155117 12q12 Hs.374201 25

nucleotide binding

microtubule motor activity

ATP binding

microtubule

microtubule-based movement

 
217722_s_at -0.500 11.404 -4.356 5.476e-04 0.067 -0.021 NGRN neugrin, neurite outgrowth associated 15 88609898 NM_016645 15q26.1 Hs.715556 Hs.716378 2

molecular_function

nucleus

multicellular organismal development

nervous system development

neuron differentiation

 
240607_at 0.523 6.006 4.355 5.486e-04 0.067 -0.023 MIAT myocardial infarction associated transcript (non-protein coding) 22 25383483 AI692560 22q12.1 Hs.517502 3    
236574_at 0.420 5.748 4.354 5.495e-04 0.067 -0.024 LOC284373 hypothetical protein LOC284373 19   AI304870 19q13.41 Hs.188680 1    
202583_s_at -1.030 6.875 -4.352 5.522e-04 0.067 -0.029 RANBP9 RAN binding protein 9 6 -13729708 NM_005493 6p23 Hs.708182 37

nucleus

cytoplasm

microtubule associated complex

protein complex assembly

microtubule nucleation

Ran GTPase binding

enzyme binding

 
213065_at -0.586 6.431 -4.351 5.526e-04 0.067 -0.029 ZFC3H1 zinc finger, C3H1-type containing 12 -70289648 AB011118 12q21.1 Hs.527874 4

binding

intracellular

RNA processing

zinc ion binding

metal ion binding

 
225639_at 1.376 6.745 4.350 5.545e-04 0.067 -0.032 SKAP2 src kinase associated phosphoprotein 2 7 -26673212 N21390 7p21-p15 Hs.200770 Hs.644804 19

SH3/SH2 adaptor activity

cytoplasm

plasma membrane

protein complex assembly

signal transduction

negative regulation of cell proliferation

B cell activation

 
200958_s_at -0.559 9.015 -4.347 5.576e-04 0.067 -0.038 SDCBP syndecan binding protein (syntenin) 8 59628281 NM_005625 8q12 Hs.200804 39

interleukin-5 receptor binding

nucleus

cytoplasm

endoplasmic reticulum

cytosol

cytoskeleton

plasma membrane

interleukin-5 receptor complex

adherens junction

focal adhesion

protein targeting to membrane

substrate-bound cell migration, cell extension

intracellular signaling cascade

Ras protein signal transduction

synaptic transmission

cytoskeletal adaptor activity

actin cytoskeleton organization

cell junction

melanosome

syndecan binding

protein heterodimerization activity

protein N-terminus binding

 
231014_at 0.468 4.971 4.346 5.586e-04 0.067 -0.039 TRIM50 tripartite motif-containing 50 7 -72364470 BG413545 7q11.23 Hs.647053 4

protein binding

intracellular

cytoplasm

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
200740_s_at -0.497 9.325 -4.342 5.635e-04 0.068 -0.047 SUMO3 SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae) 21 -45049959 NM_006936 21q22.3 Hs.474005 40

kinetochore

protein binding

cytoplasm

protein sumoylation

modification-dependent protein catabolic process

 
214265_at 0.614 5.193 4.341 5.644e-04 0.068 -0.049 ITGA8 integrin, alpha 8 10 -15599093 AI193623 10p13 Hs.171311 15

metanephros development

receptor activity

calcium ion binding

protein binding

cell-matrix adhesion

integrin-mediated signaling pathway

multicellular organismal development

nervous system development

memory

integrin complex

membrane

integral to membrane

cell-cell adhesion

cell projection organization

cell differentiation

extracellular matrix organization

positive regulation of transforming growth factor beta receptor signaling pathway

inner ear morphogenesis

apical part of cell

Focal adhesion

ECM-receptor interaction

Cell adhesion molecules (CAMs)

Regulation of actin cytoskeleton

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

205160_at 0.712 6.679 4.336 5.694e-04 0.068 -0.057 PEX11A peroxisomal biogenesis factor 11 alpha 15 -88027290 AL360141 15q26.1 Hs.31034 9

peroxisome

peroxisomal membrane

integral to peroxisomal membrane

signal transduction

membrane

integral to membrane

peroxisome fission

 
202917_s_at -2.507 5.693 -4.335 5.707e-04 0.068 -0.059 S100A8 S100 calcium binding protein A8 1 -151629131 NM_002964 1q21 Hs.416073 91

calcium ion binding

protein binding

inflammatory response

 
242545_at -0.644 5.907 -4.335 5.715e-04 0.068 -0.060 TTLL11 tubulin tyrosine ligase-like family, member 11 9 -123791010, -123624025 AA007347 9q33.2 Hs.640663 Hs.644262 5

tubulin-tyrosine ligase activity

cilium

microtubule basal body

protein modification process

ligase activity

 
208997_s_at 1.134 7.151 4.334 5.719e-04 0.068 -0.061 UCP2 uncoupling protein 2 (mitochondrial, proton carrier) 11 -73363363 U82819 11q13 Hs.80658 153

response to superoxide

binding

mitochondrion

mitochondrial inner membrane

transport

mitochondrial transport

proton transport

membrane

integral to membrane

 
200995_at -0.892 8.955 -4.332 5.745e-04 0.068 -0.065 IPO7 importin 7 11 9362744 AI741392 11p15.4 Hs.718440 22

protein import into nucleus, docking

small GTPase regulator activity

transporter activity

soluble fraction

nucleus

nuclear pore

cytoplasm

intracellular protein transport

signal transduction

Ran GTPase binding

protein transporter activity

histone binding

interspecies interaction between organisms

 
224898_at -0.801 5.465 -4.331 5.762e-04 0.068 -0.068 WDR26 WD repeat domain 26 1 -222639467 BG177759 1q42.11-q42.12 Hs.497873 8

cytoplasm

 
210544_s_at -0.798 6.810 -4.328 5.791e-04 0.068 -0.072 ALDH3A2 aldehyde dehydrogenase 3 family, member A2 17 19492655, 19492655 BC002430 17p11.2 Hs.499886 27

3-chloroallyl aldehyde dehydrogenase activity

aldehyde dehydrogenase (NAD) activity

aldehyde dehydrogenase [NAD(P)+] activity

mitochondrial inner membrane

endoplasmic reticulum

cellular aldehyde metabolic process

lipid metabolic process

central nervous system development

peripheral nervous system development

epidermis development

membrane

integral to membrane

oxidoreductase activity

oxidation reduction

Glycolysis / Gluconeogenesis

Ascorbate and aldarate metabolism

Fatty acid metabolism

Valine, leucine and isoleucine degradation

Lysine degradation

Arginine and proline metabolism

Histidine metabolism

Tryptophan metabolism

beta-Alanine metabolism

Glycerolipid metabolism

Pyruvate metabolism

Propanoate metabolism

3-Chloroacrylic acid degradation

Butanoate metabolism

Limonene and pinene degradation

Metabolic pathways

204671_s_at 0.777 5.498 4.328 5.798e-04 0.068 -0.073 ANKRD6 ankyrin repeat domain 6 6 90199615 BE677131 6q14.2-q16.1 Hs.702213 9

protein binding

 
1562403_a_at -0.822 7.147 -4.328 5.799e-04 0.068 -0.074 SLC8A3 solute carrier family 8 (sodium/calcium exchanger), member 3 14 -69580686, -69580686, -69580686 AK096553 14q24.1 Hs.337696 16

calcium:sodium antiporter activity

calcium ion binding

calmodulin binding

ion transport

sodium ion transport

calcium ion transport

cell communication

antiporter activity

membrane

integral to membrane

sodium ion binding

Calcium signaling pathway

224566_at -1.339 10.652 -4.327 5.803e-04 0.068 -0.074 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 11 64946844, 64946844 AI042152 11q13.1 Hs.523789 Hs.648467 6    
208266_at 0.556 4.306 4.327 5.806e-04 0.068 -0.075 C8orf17 chromosome 8 open reading frame 17 8   NM_020237 8q24.3 Hs.283098 2

cytoplasm

endoplasmic reticulum

endoplasmic reticulum membrane

microsome

membrane

 
218843_at 0.969 6.142 4.322 5.861e-04 0.068 -0.083 FNDC4 fibronectin type III domain containing 4 2 -27568254 NM_022823 2p23.3 Hs.27836 Hs.718524 6

membrane

integral to membrane

 
219441_s_at 0.638 5.096 4.322 5.866e-04 0.068 -0.084 LRRK1 leucine-rich repeat kinase 1 15 99276982 NM_024652 15q26.3 Hs.407918 16

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

GTP binding

intracellular

cytoplasm

protein amino acid phosphorylation

small GTPase mediated signal transduction

transferase activity

manganese ion binding

 
204422_s_at 1.491 3.435 4.321 5.870e-04 0.068 -0.085 FGF2 fibroblast growth factor 2 (basic) 4 123967312 NM_002006 4q26-q27 Hs.284244 320

activation of MAPKK activity

activation of MAPK activity

induction of an organ

positive regulation of protein amino acid phosphorylation

protein binding

extracellular region

extracellular region

extracellular space

apoptosis

chemotaxis

signal transduction

Ras protein signal transduction

multicellular organismal development

nervous system development

growth factor activity

heparin binding

negative regulation of cell proliferation

fibroblast growth factor receptor signaling pathway

organ morphogenesis

glial cell differentiation

positive regulation of granule cell precursor proliferation

lung development

positive regulation of blood vessel endothelial cell migration

negative regulation of blood vessel endothelial cell migration

positive regulation of cell differentiation

positive regulation of angiogenesis

regulation of retinal cell programmed cell death

positive regulation of epithelial cell proliferation

positive regulation of cardiac muscle cell proliferation

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

206263_at -0.568 4.371 -4.321 5.870e-04 0.068 -0.085 FMO4 flavin containing monooxygenase 4 1 169550109 NM_002022 1q23-q25 Hs.386502 11

monooxygenase activity

flavin-containing monooxygenase activity

endoplasmic reticulum

microsome

xenobiotic metabolic process

membrane

integral to membrane

intrinsic to endoplasmic reticulum membrane

FAD binding

NADP or NADPH binding

oxidation reduction

Drug metabolism - cytochrome P450

206995_x_at 0.625 4.988 4.320 5.883e-04 0.068 -0.087 SCARF1 scavenger receptor class F, member 1 17 -1483902, -1483901 NM_003693 17p13.3 Hs.647430 6

scavenger receptor activity

protein binding

cholesterol catabolic process

receptor-mediated endocytosis

cell adhesion

membrane

integral to membrane

low-density lipoprotein binding

 
221217_s_at -0.722 9.440 -4.314 5.961e-04 0.068 -0.099 A2BP1 ataxin 2-binding protein 1 16 6009132, 6763810, 7322751 NM_018723 16p13.3 Hs.459842 22

nucleotide binding

RNA binding

nucleus

cytoplasm

trans-Golgi network

mRNA processing

protein C-terminus binding

RNA splicing

RNA transport

 
221432_s_at 0.599 7.402 4.313 5.966e-04 0.068 -0.100 SLC25A28 solute carrier family 25, member 28 10 -101360264 NM_031212 10q23-q24 Hs.403790 6

binding

iron ion binding

mitochondrion

mitochondrial inner membrane

ion transport

iron ion transport

membrane

integral to membrane

 
224843_at -0.595 4.779 -4.313 5.970e-04 0.068 -0.100 SLAIN2 SLAIN motif family, member 2 4 48038369 AB040891 4p11 Hs.479677 5    
202059_s_at -0.887 7.441 -4.312 5.983e-04 0.068 -0.102 KPNA1 karyopherin alpha 1 (importin alpha 5) 3 -123623437 NM_002264 3q21 Hs.161008 92

regulation of DNA recombination

protein binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

cytosol

NLS-bearing substrate import into nucleus

intracellular protein transport

nuclear localization sequence binding

protein transporter activity

interspecies interaction between organisms

 
207188_at 0.527 5.404 4.312 5.989e-04 0.068 -0.103 CDK3 cyclin-dependent kinase 3 17 71508581 NM_001258 17q22-qter Hs.706766 21

nucleotide binding

cyclin-dependent protein kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

cell cycle

mitosis

cell proliferation

transferase activity

cell division

 
202313_at -0.440 8.633 -4.309 6.024e-04 0.068 -0.108 PPP2R2A protein phosphatase 2 (formerly 2A), regulatory subunit B, alpha isoform 8 26204950 NM_002717 8p21.2 Hs.146339 44

protein phosphatase type 2A complex

protein serine/threonine phosphatase activity

protein binding

protein amino acid dephosphorylation

signal transduction

protein phosphatase type 2A regulator activity

response to morphine

Tight junction

209825_s_at -0.775 6.658 -4.307 6.050e-04 0.068 -0.113 UCK2 uridine-cytidine kinase 2 1 164063513 BC002906 1q23 Hs.458360 22

nucleotide binding

molecular_function

uridine kinase activity

ATP binding

cellular_component

cytosol

metabolic process

kinase activity

transferase activity

phosphotransferase activity, alcohol group as acceptor

Pyrimidine metabolism

Drug metabolism - other enzymes

Metabolic pathways

228561_at -1.188 6.687 -4.306 6.063e-04 0.068 -0.114 CDC37L1 cell division cycle 37 homolog (S. cerevisiae)-like 1 9 4669565 BF510563 9p24.1 Hs.561954 6

protein binding

cytoplasm

 
221052_at 0.405 3.135 4.305 6.072e-04 0.068 -0.116 TDRKH tudor and KH domain containing 1 -150012579, -150010664 NM_006862 1q21 Hs.144439 8

RNA binding

 
230919_at 0.843 3.345 4.302 6.107e-04 0.068 -0.121 ZNF233 zinc finger protein 233 19 49455915 AW006620 19q13.31 Hs.466891 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
201079_at -0.854 9.237 -4.300 6.130e-04 0.068 -0.124 SYNGR2 synaptogyrin 2 17 73676265 NM_004710 17q25.3 Hs.464210 Hs.708616 5

integral to plasma membrane

membrane

 
224827_at -0.883 6.243 -4.300 6.136e-04 0.068 -0.125 UBTD2 ubiquitin domain containing 2 5 -171569254 AK022894 5q35.1 Hs.131570 Hs.716824 7

cytoplasm

 
222858_s_at 0.579 5.408 4.298 6.157e-04 0.068 -0.128 DAPP1 dual adaptor of phosphotyrosine and 3-phosphoinositides 4 100957003 AI632216 4q25-q27 Hs.436271 Hs.708484 15

protein tyrosine phosphatase activity

protein binding

phospholipid binding

cellular_component

cytoplasm

protein amino acid dephosphorylation

signal transduction

membrane

B cell receptor signaling pathway

208370_s_at -1.057 7.490 -4.298 6.160e-04 0.068 -0.129 RCAN1 regulator of calcineurin 1 21 -34810653, -34810653, -34810653 NM_004414 21q22.1-q22.2 21q22.12 Hs.282326 45

transcription factor activity

protein binding

nucleus

cytoplasm

signal transduction

central nervous system development

blood circulation

response to mechanical stimulus

calcium-mediated signaling

response to estrogen stimulus

regulation of phosphoprotein phosphatase activity

skeletal muscle fiber development

negative regulation of smooth muscle cell differentiation

 
208744_x_at -0.571 6.312 -4.297 6.170e-04 0.068 -0.130 HSPH1 heat shock 105kDa/110kDa protein 1 13 -30608762 BG403660 13q12.3 Hs.36927 25

nucleotide binding

ATP binding

cytoplasm

response to unfolded protein

 
217993_s_at -0.682 9.801 -4.296 6.177e-04 0.068 -0.131 MAT2B methionine adenosyltransferase II, beta 5 162862808, 162865162 NM_013283 5q34-q35 Hs.54642 20

catalytic activity

protein binding

intracellular

nucleus

S-adenosylmethionine biosynthetic process

S-adenosylmethionine biosynthetic process

one-carbon metabolic process

metabolic process

dTDP-4-dehydrorhamnose reductase activity

extracellular polysaccharide biosynthetic process

methionine adenosyltransferase complex

methionine adenosyltransferase regulator activity

methionine adenosyltransferase regulator activity

Cysteine and methionine metabolism

Selenoamino acid metabolism

Biosynthesis of plant hormones

Metabolic pathways

233557_s_at -0.439 5.174 -4.295 6.191e-04 0.068 -0.134 MON1B MON1 homolog B (yeast) 16 75782336 AK023374 16q23.1 Hs.513743 6    
213166_x_at 0.837 8.455 4.292 6.231e-04 0.069 -0.139 FAM128A family with sequence similarity 128, member A 2 -131958002 BG332462 2q21.1 Hs.655067 2    
212002_at -0.471 7.210 -4.290 6.252e-04 0.069 -0.143 C1orf144 chromosome 1 open reading frame 144 1 16566169 AL561657 1p36.13 Hs.252967 2    
200972_at -0.840 10.380 -4.289 6.274e-04 0.069 -0.146 TSPAN3 tetraspanin 3 15 -75125385 BC000704 15q24.3 Hs.5062 Hs.716484 8

membrane

integral to membrane

 
214328_s_at -0.476 11.601 -4.286 6.311e-04 0.069 -0.151 HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 14 -101616827, -101616827 R01140 14q32.33 Hs.525600 Hs.700831 275

nucleotide binding

ATP binding

cytoplasm

cytosol

cytosol

mitochondrial transport

response to unfolded protein

signal transduction

nitric-oxide synthase regulator activity

TPR domain binding

TPR domain binding

cellular chaperone-mediated protein complex assembly

protein refolding

melanosome

protein homodimerization activity

positive regulation of nitric oxide biosynthetic process

unfolded protein binding

mitochondrial outer membrane translocase complex assembly

Antigen processing and presentation

Pathways in cancer

Prostate cancer

223309_x_at -0.612 7.849 -4.285 6.314e-04 0.069 -0.152 PNPLA8 patatin-like phospholipase domain containing 8 7 -107899306 BG025248 7q31 Hs.617340 13

lysophospholipase activity

binding

ATP binding

intracellular

intracellular

membrane fraction

membrane fraction

cytoplasm

peroxisomal membrane

peroxisomal membrane

endoplasmic reticulum

Golgi apparatus

fatty acid metabolic process

fatty acid metabolic process

metabolic process

membrane

integral to membrane

lipid catabolic process

hydrolase activity

calcium-independent phospholipase A2 activity

calcium-independent phospholipase A2 activity

perinuclear region of cytoplasm

 
210691_s_at -0.601 8.089 -4.285 6.316e-04 0.069 -0.152 CACYBP calcyclin binding protein 1 173235193, 173235514 AF275803 1q24-q25 Hs.508524 15

protein binding

nucleus

cytoplasm

modification-dependent protein catabolic process

Wnt signaling pathway

241233_x_at 0.444 7.465 4.282 6.357e-04 0.069 -0.158 C21orf81 ankyrin repeat domain 20 family, member A3 pseudogene 21 -14237966 AI978581 21q11.2 Hs.364456 2    
201457_x_at -0.626 6.984 -4.282 6.359e-04 0.069 -0.158 BUB3 budding uninhibited by benzimidazoles 3 homolog (yeast) 10 124903749 AF081496 10q26 Hs.418533 28

kinetochore

protein binding

nucleus

nucleolus

cytosol

mitosis

mitotic cell cycle checkpoint

cell proliferation

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

224767_at -0.443 6.011 -4.282 6.363e-04 0.069 -0.159 RPL37 ribosomal protein L37 5 -40867186 AL044126 5p13 Hs.558601 Hs.80545 12

structural constituent of ribosome

protein binding

intracellular

cytosol

ribosome

translational elongation

zinc ion binding

rRNA binding

cytosolic large ribosomal subunit

metal ion binding

Ribosome

223716_s_at -0.534 9.448 -4.281 6.368e-04 0.069 -0.160 ZRANB2 zinc finger, RAN-binding domain containing 2 1 -71301561 AF065391 1p31 Hs.194718 18

transcription factor activity

RNA binding

protein binding

intracellular

nucleus

mRNA processing

zinc ion binding

RNA splicing

metal ion binding

 
226563_at -0.555 6.864 -4.279 6.400e-04 0.069 -0.164 SMAD2 SMAD family member 2 18 -43613464, -43613463, -43613463 BF793454 18q21.1 Hs.12253 Hs.705764 206

mesoderm formation

double-stranded DNA binding

transcription factor activity

intracellular

nucleus

nucleoplasm

cytoplasm

cytosol

SMAD protein complex assembly

intracellular signaling cascade

zygotic determination of dorsal/ventral axis

gastrulation

transcription factor binding

anterior/posterior pattern formation

positive regulation of epithelial to mesenchymal transition

promoter binding

transcription activator activity

regulation of transforming growth factor beta receptor signaling pathway

transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity

primary microRNA processing

ubiquitin protein ligase binding

activin responsive factor complex

type I transforming growth factor beta receptor binding

positive regulation of gene-specific transcription

cell fate commitment

negative regulation of transcription, DNA-dependent

positive regulation of transcription from RNA polymerase II promoter

paraxial mesoderm morphogenesis

regulation of binding

palate development

co-SMAD binding

R-SMAD binding

response to cholesterol

Cell cycle

Wnt signaling pathway

TGF-beta signaling pathway

Adherens junction

Pathways in cancer

Colorectal cancer

Pancreatic cancer

200593_s_at -0.450 7.885 -4.278 6.410e-04 0.069 -0.165 HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 1 -243080224 BC003621 1q44 Hs.106212 47

nucleotide binding

nuclear mRNA splicing, via spliceosome

DNA binding

RNA binding

protein binding

ATP binding

nucleus

spliceosomal complex

RNA splicing

cell surface

heterogeneous nuclear ribonucleoprotein complex

 
215307_at 0.606 3.799 4.274 6.460e-04 0.069 -0.173 ZNF529 zinc finger protein 529 19 -41762996, -41726357, -41726357 AL109722 19q13.13 Hs.708146 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
204706_at 0.511 6.578 4.274 6.465e-04 0.069 -0.173 INPP5E inositol polyphosphate-5-phosphatase, 72 kDa 9 -138442892 NM_019892 9q34.3 Hs.120998 5

Golgi membrane

inositol or phosphatidylinositol phosphatase activity

phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity

inositol-polyphosphate 5-phosphatase activity

cellular_component

Golgi apparatus

lipid metabolic process

biological_process

membrane

hydrolase activity

Inositol phosphate metabolism

Metabolic pathways

Phosphatidylinositol signaling system

227973_at -0.883 6.770 -4.273 6.471e-04 0.069 -0.174 C2orf69 chromosome 2 open reading frame 69 2 200484223 BF130937 2q33.1 Hs.471040 3

extracellular region

 
202815_s_at -0.809 6.944 -4.272 6.486e-04 0.069 -0.176 HEXIM1 hexamethylene bis-acetamide inducible 1 17 40580466 NM_006460 17q21.31 Hs.586945 Hs.634944 Hs.716487 28

negative regulation of transcription from RNA polymerase II promoter

cyclin-dependent protein kinase inhibitor activity

protein binding

nucleus

cytoplasm

heart development

specific transcriptional repressor activity

snRNA binding

regulation of transcription

negative regulation of cyclin-dependent protein kinase activity

 
225365_at -0.640 5.561 -4.271 6.499e-04 0.069 -0.178 ZDHHC20 zinc finger, DHHC-type containing 20 13 -20848507 BG249221 13q12.11 Hs.564611 Hs.693749 4

zinc ion binding

acyltransferase activity

membrane

integral to membrane

transferase activity

metal ion binding

 
201899_s_at -0.507 9.213 -4.270 6.512e-04 0.069 -0.180 UBE2A ubiquitin-conjugating enzyme E2A (RAD6 homolog) X 118592526, 118598325 NM_003336 Xq24-q25 Hs.379466 16

nucleotide binding

chromatin

ubiquitin-protein ligase activity

ATP binding

postreplication repair

ubiquitin-dependent protein catabolic process

response to DNA damage stimulus

positive regulation of cell proliferation

response to UV

ligase activity

ubiquitin protein ligase binding

histone H2A ubiquitination

post-translational protein modification

regulation of protein metabolic process

protein autoubiquitination

Ubiquitin mediated proteolysis

1569566_at -1.401 4.803 -4.269 6.528e-04 0.069 -0.182 TBC1D1 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 4 37569114 BC028196 4p14 Hs.176503 15

GTPase activator activity

Rab GTPase activator activity

intracellular

nucleus

regulation of Rab GTPase activity

 
227135_at -0.468 5.638 -4.266 6.565e-04 0.070 -0.187 NAAA N-acylethanolamine acid amidase 4 -77053832, -77050831 AI436803 4q21.1 Hs.437365 12

molecular_function

cellular_component

cytoplasm

lysosome

lipid metabolic process

biological_process

hydrolase activity

 
213864_s_at -0.755 9.661 -4.261 6.637e-04 0.070 -0.197 NAP1L1 nucleosome assembly protein 1-like 1 12 -74724938 AI985751 12q21.2 Hs.524599 Hs.695185 17

protein binding

nucleus

chromatin assembly complex

DNA replication

nucleosome assembly

positive regulation of cell proliferation

melanosome

 
1555882_at -1.328 3.612 -4.257 6.695e-04 0.071 -0.205 SPIN3 spindlin family, member 3 X -57033988, -57019529 AJ271379 Xp11.21 Hs.522672 6

gamete generation

 
226592_at 0.518 5.056 4.251 6.771e-04 0.071 -0.216 ZNF618 zinc finger protein 618 9 115678382 AA031404 9q32 Hs.349208 2

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

protein dimerization activity

 
208763_s_at -0.798 9.335 -4.242 6.892e-04 0.072 -0.232 TSC22D3 TSC22 domain family, member 3 X -106843107, -106843107, -106843107 AL110191 Xq22.3 Hs.716410 24

transcription factor activity

regulation of transcription, DNA-dependent

 
219109_at 0.900 6.414 4.242 6.896e-04 0.072 -0.233 SPAG16 sperm associated antigen 16 2 213857360, 213857360 NM_024532 2q34 Hs.602792 Hs.715620 6

cytoplasm

cilium

flagellum

cell projection organization

 
203423_at 1.613 6.369 4.240 6.921e-04 0.072 -0.236 RBP1 retinol binding protein 1, cellular 3 -140727937, -140727317, -140718965 NM_002899 3q23 Hs.529571 31

transporter activity

cytoplasm

transport

lipid binding

retinal binding

retinol binding

retinol metabolic process

retinoic acid metabolic process

 
201381_x_at -0.424 9.087 -4.239 6.935e-04 0.072 -0.238 CACYBP calcyclin binding protein 1 173235193, 173235514 AF057356 1q24-q25 Hs.508524 15

protein binding

nucleus

cytoplasm

modification-dependent protein catabolic process

Wnt signaling pathway

212586_at -0.801 9.942 -4.239 6.936e-04 0.072 -0.238 CAST calpastatin 5 96023696, 96064251, 96104999 AA195244 5q15 Hs.436186 60

protein binding

calcium-dependent cysteine-type endopeptidase inhibitor activity

 
223908_at -0.918 4.374 -4.234 7.004e-04 0.072 -0.247 HDAC8 histone deacetylase 8 X -71466090 AF212246 Xq13 Hs.310536 23

histone deacetylase complex

negative regulation of transcription from RNA polymerase II promoter

nuclear chromosome

histone deacetylase activity

nucleus

cytoplasm

chromatin assembly or disassembly

transcription factor binding

chromatin modification

histone deacetylation

hydrolase activity

regulation of transcription

 
206685_at 0.447 3.409 4.234 7.004e-04 0.072 -0.247 HCG4 HLA complex group 4 6 -29866787, -1211427, -1013559 NM_018985 6p21.3 Hs.660431 2    
209288_s_at -1.267 7.632 -4.233 7.023e-04 0.072 -0.249 CDC42EP3 CDC42 effector protein (Rho GTPase binding) 3 2 -37724246 AL136842 2p21 Hs.369574 17

protein binding

cytoskeletal regulatory protein binding

cytoplasm

signal transduction

regulation of cell shape

actin cytoskeleton

membrane

 
210807_s_at 0.811 4.907 4.232 7.033e-04 0.072 -0.251 SLC16A7 solute carrier family 16, member 7 (monocarboxylic acid transporter 2) 12 58369392 AF049608 12q13 Hs.439643 8

pyruvate secondary active transmembrane transporter activity

membrane fraction

plasma membrane

integral to plasma membrane

transport

pyruvate transport

symporter activity

secondary active monocarboxylate transmembrane transporter activity

organic anion transport

 
222847_s_at -0.648 5.277 -4.232 7.034e-04 0.072 -0.251 EGLN3 egl nine homolog 3 (C. elegans) 14 -33463171 AI378406 14q13.1 Hs.135507 26

iron ion binding

protein binding

nucleus

cytoplasm

apoptosis

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

L-ascorbic acid binding

metal ion binding

oxidation reduction

Pathways in cancer

Renal cell carcinoma

221606_s_at -0.849 5.373 -4.231 7.047e-04 0.072 -0.252 NSBP1 nucleosomal binding protein 1 X -80255855 BC005342 Xq13.3 Hs.282204 7

chromatin

DNA binding

chromatin binding

nucleus

nucleoplasm

nucleolus

regulation of transcription from RNA polymerase I promoter

transcription activator activity

 
1554678_s_at -0.562 8.367 -4.231 7.060e-04 0.072 -0.254 HNRPDL heterogeneous nuclear ribonucleoprotein D-like 4 -83563370 AB066484 4q13-q21 Hs.527105 14

nucleotide binding

DNA binding

double-stranded DNA binding

single-stranded DNA binding

RNA binding

protein binding

nucleus

cytoplasm

RNA processing

poly(A) RNA binding

heterogeneous nuclear ribonucleoprotein complex

regulation of transcription

 
237560_at 0.725 5.661 4.227 7.103e-04 0.072 -0.260 MRPS5 mitochondrial ribosomal protein S5 2 -95116678 AI015881 2p11.2-q11.2 Hs.655259 9

RNA binding

structural constituent of ribosome

protein binding

intracellular

mitochondrion

ribosome

translation

 
218033_s_at -1.116 5.345 -4.227 7.105e-04 0.072 -0.260 SNN stannin 16 11669801 NM_003498 16p13 Hs.700592 11

response to stress

response to abiotic stimulus

membrane

integral to membrane

 
235042_at -1.618 9.868 -4.226 7.129e-04 0.072 -0.263 XIRP1 xin actin-binding repeat containing 1 3 -39199710 AW755250 3p22.2 Hs.447868 7

actin binding

fascia adherens

negative regulation of cell proliferation

actin cytoskeleton organization

cell junction

regulation of membrane potential

sarcomere organization

cardiac muscle cell development

 
240459_at -0.476 3.787 -4.220 7.213e-04 0.073 -0.274 YTHDC1 YTH domain containing 1 4 -68858699 AW467048 4q13.2 Hs.175955 18

nucleus

mRNA processing

RNA splicing

 
221519_at -0.578 7.992 -4.217 7.251e-04 0.073 -0.279 FBXW4 F-box and WD repeat domain containing 4 10 -103360410 AF281859 10q24 Hs.500822 16

ubiquitin ligase complex

molecular_function

ubiquitin-dependent protein catabolic process

multicellular organismal development

Wnt receptor signaling pathway

embryonic limb morphogenesis

limb development

 
224840_at -1.384 10.230 -4.214 7.305e-04 0.074 -0.285 FKBP5 FK506 binding protein 5 6 -35656311, -35649339, -35649339, -35649339 AI753747 6p21.3-p21.2 Hs.407190 50

peptidyl-prolyl cis-trans isomerase activity

FK506 binding

nucleus

cytoplasm

protein folding

isomerase activity

heat shock protein binding

 
212565_at -0.839 6.648 -4.208 7.395e-04 0.075 -0.297 STK38L serine/threonine kinase 38 like 12 27288344 BE302191 12p11.23 Hs.184523 15

nucleotide binding

magnesium ion binding

actin binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

protein kinase cascade

actin cytoskeleton

transferase activity

regulation of cellular component organization

 
201646_at -0.974 7.181 -4.206 7.419e-04 0.075 -0.300 SCARB2 scavenger receptor class B, member 2 4 -77298917 AA885297 4q21.1 Hs.349656 Hs.714206 24

receptor activity

protein binding

membrane fraction

lysosome

integral to plasma membrane

cell adhesion

membrane

Lysosome

1560145_at -0.591 5.884 -4.204 7.448e-04 0.075 -0.303 MKLN1 muskelin 1, intracellular mediator containing kelch motifs 7 130445394, 130663134 BQ942131 7q32 Hs.44693 13

protein binding

cytoplasm

signal transduction

 
238974_at -0.763 9.063 -4.203 7.464e-04 0.075 -0.305 C2orf69 chromosome 2 open reading frame 69 2 200484223 N47077 2q33.1 Hs.471040 3

extracellular region

 
214709_s_at -0.663 11.707 -4.203 7.470e-04 0.075 -0.306 KTN1 kinectin 1 (kinesin receptor) 14 55116677, 55116677 Z22551 14q22.1 Hs.509414 30

molecular_function

membrane fraction

endoplasmic reticulum

endoplasmic reticulum membrane

integral to plasma membrane

microtubule-based movement

membrane

 
213745_at -1.143 2.958 -4.197 7.557e-04 0.076 -0.317 ATRNL1 attractin-like 1 10 116843113 AW151108 10q26 Hs.501127 3

binding

sugar binding

membrane

integral to membrane

 
218520_at -0.694 6.533 -4.195 7.590e-04 0.076 -0.321 TBK1 TANK-binding kinase 1 12 63132203 NM_013254 12q14.1 Hs.505874 Hs.607889 51

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

cytosol

protein amino acid phosphorylation

response to virus

transferase activity

positive regulation of I-kappaB kinase/NF-kappaB cascade

interspecies interaction between organisms

innate immune response

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

210156_s_at -0.636 9.210 -4.195 7.593e-04 0.076 -0.321 PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 6 150112523 D25547 6q24-q25 Hs.279257 25

protein-L-isoaspartate (D-aspartate) O-methyltransferase activity

cellular_component

cytoplasm

endoplasmic reticulum

protein modification process

protein amino acid methylation

methyltransferase activity

transferase activity

protein repair

identical protein binding

 
226247_at -0.719 7.755 -4.194 7.605e-04 0.076 -0.322 PLEKHA1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 10 124124209, 124141832 AI346026 10q26.13 Hs.643512 16

phospholipid binding

cellular_component

nucleus

cytoplasm

plasma membrane

biological_process

 
226398_s_at 0.526 7.559 4.188 7.704e-04 0.076 -0.334 C10orf4 chromosome 10 open reading frame 4 10 -95418318 AI804930 10q23.33 Hs.658192 7

protein binding

nucleus

 
203711_s_at -0.630 7.456 -4.187 7.708e-04 0.076 -0.335 HIBCH 3-hydroxyisobutyryl-Coenzyme A hydrolase 2 -190777604 NM_014362 2q32.2 Hs.656685 8

3-hydroxyisobutyryl-CoA hydrolase activity

protein binding

mitochondrion

metabolic process

branched chain family amino acid catabolic process

hydrolase activity

Valine, leucine and isoleucine degradation

beta-Alanine metabolism

Propanoate metabolism

Metabolic pathways

209018_s_at -0.563 9.533 -4.186 7.728e-04 0.076 -0.337 PINK1 PTEN induced putative kinase 1 1 20832534 BF432478 1p36 Hs.389171 105

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

ATP binding

mitochondrion

mitochondrial outer membrane

protein amino acid phosphorylation

response to stress

protein kinase cascade

membrane

integral to membrane

transferase activity

positive regulation of synaptic transmission, dopaminergic

positive regulation of dopamine secretion

Parkinson's disease

217856_at -0.950 5.399 -4.183 7.780e-04 0.076 -0.343 RBM8A RNA binding motif protein 8A 1 144218994 AF182415 1q12 Hs.356873 43

nucleotide binding

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

nuclear mRNA splicing, via spliceosome

mRNA binding

protein binding

nucleus

spliceosomal complex

cytoplasm

transport

biological_process

RNA splicing

nuclear speck

exon-exon junction complex

mRNA transport

 
233825_s_at -0.982 7.468 -4.181 7.806e-04 0.076 -0.346 CD99L2 CD99 molecule-like 2 X -149685466 AU158444 Xq28 Hs.522805 8

protein binding

plasma membrane

cell adhesion

integral to membrane

cell junction

 
202723_s_at -0.782 6.727 -4.181 7.812e-04 0.076 -0.347 FOXO1 forkhead box O1 13 -40027800 AW117498 13q14.1 Hs.370666 140

blood vessel development

transcription factor activity

protein binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

anti-apoptosis

insulin receptor signaling pathway

transcription activator activity

regulation of cell proliferation

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

Insulin signaling pathway

Pathways in cancer

Prostate cancer

208624_s_at -0.851 6.994 -4.180 7.819e-04 0.076 -0.348 EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 3 185515049, 185515664, 185520956 BE966878 3q27-qter Hs.433750 91

RNA binding

translation initiation factor activity

protein binding

cytoplasm

cytosol

regulation of translational initiation

RNA metabolic process

eukaryotic translation initiation factor 4F complex

interspecies interaction between organisms

 
203466_at 0.488 6.450 4.180 7.823e-04 0.076 -0.348 MPV17 MpV17 mitochondrial inner membrane protein 2 -27385863 NM_002437 2p23.3 Hs.75659 17

mitochondrial genome maintenance

molecular_function

mitochondrion

mitochondrial inner membrane

integral to peroxisomal membrane

oxygen and reactive oxygen species metabolic process

membrane

integral to membrane

homeostatic process

 
231157_at -0.736 5.922 -4.177 7.876e-04 0.077 -0.354 TTLL11 tubulin tyrosine ligase-like family, member 11 9 -123791010, -123624025 BE856668 9q33.2 Hs.640663 Hs.644262 5

tubulin-tyrosine ligase activity

cilium

microtubule basal body

protein modification process

ligase activity

 
233669_s_at -0.530 7.947 -4.176 7.885e-04 0.077 -0.356 TRIM54 tripartite motif-containing 54 2 27359103 AA868267 2p23.3 Hs.516036 5

signal transducer activity

protein binding

intracellular

cytoplasm

cytoskeleton

microtubule

microtubule associated complex

microtubule-based process

negative regulation of microtubule depolymerization

signal transduction

multicellular organismal development

microtubule binding

zinc ion binding

Z disc

cell differentiation

metal ion binding

 
207705_s_at 1.018 6.329 4.172 7.948e-04 0.077 -0.363 NINL ninein-like 20 -25381337 NM_025176 20p11.22-p11.1 Hs.696157 13

calcium ion binding

cytoplasm

centrosome

microtubule

 
236193_at -1.254 5.263 -4.167 8.038e-04 0.078 -0.373 HIST1H2BC histone cluster 1, H2bc 6 -26231673 AA037483 6p21.3 Hs.658713 10

nucleosome

DNA binding

protein binding

nucleus

chromosome

nucleosome assembly

defense response to bacterium

Systemic lupus erythematosus

200993_at -0.558 10.084 -4.167 8.039e-04 0.078 -0.373 IPO7 importin 7 11 9362744 AA939270 11p15.4 Hs.718440 22

protein import into nucleus, docking

small GTPase regulator activity

transporter activity

soluble fraction

nucleus

nuclear pore

cytoplasm

intracellular protein transport

signal transduction

Ran GTPase binding

protein transporter activity

histone binding

interspecies interaction between organisms

 
236250_at -0.478 5.927 -4.166 8.052e-04 0.078 -0.375 AFG3L1 AFG3 ATPase family gene 3-like 1 (S. cerevisiae) 16 88566488, 88566488 AI859065 16q24.3 Hs.534773 6    
216115_at -0.460 5.019 -4.164 8.082e-04 0.078 -0.378 NF1 neurofibromin 1 17 26446120, 26446120 AK024873 17q11.2 Hs.113577 204

osteoblast differentiation

metanephros development

response to hypoxia

liver development

negative regulation of endothelial cell proliferation

regulation of cell-matrix adhesion

Ras GTPase activator activity

protein binding

intracellular

nucleus

cytoplasm

signal transduction

Ras protein signal transduction

negative regulation of neuroblast proliferation

brain development

peripheral nervous system development

heart development

visual learning

phosphoinositide 3-kinase cascade

spinal cord development

forebrain astrocyte development

cerebral cortex development

myelination in the peripheral nervous system

actin cytoskeleton organization

collagen fibril organization

adrenal gland development

negative regulation of cell migration

axon

dendrite

positive regulation of Ras GTPase activity

wound healing

negative regulation of transcription factor import into nucleus

negative regulation of MAP kinase activity

negative regulation of MAPKKK cascade

pigmentation

positive regulation of neuron apoptosis

regulation of blood vessel endothelial cell migration

regulation of bone resorption

regulation of glial cell differentiation

positive regulation of adenylate cyclase activity

regulation of angiogenesis

sympathetic nervous system development

camera-type eye morphogenesis

negative regulation of oligodendrocyte differentiation

smooth muscle tissue development

artery morphogenesis

forebrain morphogenesis

cognition

regulation of small GTPase mediated signal transduction

MAPK signaling pathway

220539_at -0.894 6.761 -4.164 8.082e-04 0.078 -0.378 C10orf92 chromosome 10 open reading frame 92 10 -134471886 NM_017609 10q26.3 Hs.298038 6    
215071_s_at -0.914 7.430 -4.161 8.140e-04 0.078 -0.385 HIST1H2AC histone cluster 1, H2ac 6 26232351 AL353759 6p21.3 Hs.699831 19

nucleosome

DNA binding

nucleus

chromosome

nucleosome assembly

Systemic lupus erythematosus

235798_at -1.059 6.282 -4.159 8.166e-04 0.078 -0.388 TMEM170B transmembrane protein 170B 6 11646496 BE671123 6p24.2 Hs.146317 1

membrane

integral to membrane

 
218265_at -0.496 6.809 -4.157 8.194e-04 0.078 -0.391 SECISBP2 SECIS binding protein 2 9 91123231 NM_024077 9q22.2 Hs.59804 20

RNA binding

mRNA 3'-UTR binding

nucleus

translation

 
228594_at 0.405 7.140 4.157 8.198e-04 0.078 -0.391 C5orf33 chromosome 5 open reading frame 33 5 -36228450, -36228450 H94910 5p13.2 Hs.81907 3

NAD+ kinase activity

metabolic process

 
222611_s_at -0.824 5.386 -4.155 8.235e-04 0.078 -0.395 PSPC1 paraspeckle component 1 13 -19175008, -19146895 AA969958 13q12.11 Hs.213198 9

nucleotide binding

RNA binding

protein binding

nucleus

nucleolus

cytoplasm

nuclear matrix

regulation of transcription

 
204185_x_at -0.761 9.597 -4.154 8.243e-04 0.078 -0.396 PPID peptidylprolyl isomerase D 4 -159849728 NM_005038 4q31.3 Hs.581725 25

peptidyl-prolyl cis-trans isomerase activity

cytoplasm

protein folding

cyclosporin A binding

isomerase activity

heat shock protein binding

Calcium signaling pathway

Parkinson's disease

Huntington's disease

218954_s_at -0.788 6.227 -4.154 8.248e-04 0.078 -0.397 BRF2 BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like 8 -37820560 AF298153 8p11.23 Hs.709301 11

protein binding

nucleus

transcription factor complex

transcription initiation

regulation of transcription, DNA-dependent

zinc ion binding

transcription regulator activity

metal ion binding

 
222431_at 0.721 6.362 4.154 8.257e-04 0.078 -0.398 SPIN1 spindlin 1 9 90193116 AL136719 9q22.1-q22.3 Hs.146804 16

nucleus

spindle

cell cycle

multicellular organismal development

gamete generation

 
210170_at -1.661 9.678 -4.152 8.280e-04 0.078 -0.400 PDLIM3 PDZ and LIM domain 3 4 -186659844 BC001017 4q35 Hs.85862 12

nucleus

nucleolus

cytoplasm

actin filament organization

heart development

cytoskeletal protein binding

zinc ion binding

structural constituent of muscle

actin cytoskeleton

Z disc

metal ion binding

 
218024_at 0.777 10.668 4.152 8.286e-04 0.078 -0.401 BRP44L brain protein 44-like 6 -166698399 NM_016098 6q27 Hs.172755 7

molecular_function

cellular_component

mitochondrion

biological_process

 
225049_at -0.639 9.138 -4.149 8.341e-04 0.078 -0.407 BLOC1S2 biogenesis of lysosomal organelles complex-1, subunit 2 10 -102023702, -102023702 BF382281 10q24.31 Hs.34906 12

gamma-tubulin complex

centrosome

BLOC-1 complex

melanosome organization

identical protein binding

regulation of apoptosis

gamma-tubulin binding

platelet dense granule organization

 
218984_at -0.639 6.570 -4.146 8.391e-04 0.079 -0.413 PUS7 pseudouridylate synthase 7 homolog (S. cerevisiae) 7 -104884195 NM_019042 7q22.3 Hs.520619 5

pseudouridine synthesis

RNA binding

tRNA processing

pseudouridine synthase activity

isomerase activity

 
201096_s_at -0.524 7.868 -4.144 8.418e-04 0.079 -0.416 ARF4 ADP-ribosylation factor 4 3 -57532129 AL537042 3p21.2-p21.1 Hs.695943 19

nucleotide binding

GTPase activity

GTP binding

intracellular

cytoplasm

Golgi apparatus

plasma membrane

small GTPase mediated signal transduction

protein transport

vesicle-mediated transport

 
1567014_s_at -0.714 5.957 -4.138 8.530e-04 0.079 -0.428 NFE2L2 nuclear factor (erythroid-derived 2)-like 2 2 -177803279, -177803278 AF323119 2q31 Hs.715540 141

transcription factor activity

nucleus

cytoplasm

cytosol

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

sequence-specific DNA binding

protein dimerization activity

 
232119_at -1.117 7.352 -4.137 8.543e-04 0.079 -0.429 SYNPO2 synaptopodin 2 4 120029443, 120029443 BF984227 4q26 Hs.655519 14

actin binding

protein binding

nucleus

cytoplasm

 
235261_at -0.693 10.438 -4.136 8.550e-04 0.079 -0.430 UNC45B unc-45 homolog B (C. elegans) 17 30498948 AI800785 17q12 Hs.379636 4

binding

multicellular organismal development

muscle organ development

cell differentiation

 
204784_s_at -1.819 8.892 -4.135 8.572e-04 0.079 -0.432 MLF1 myeloid leukemia factor 1 3 159771646 NM_022443 3q25.1 Hs.85195 14

myeloid progenitor cell differentiation

DNA binding

nucleus

cytoplasm

transcription

cell cycle

cell cycle arrest

multicellular organismal development

protein domain specific binding

cell differentiation

 
217976_s_at -0.691 7.682 -4.134 8.588e-04 0.079 -0.434 DYNC1LI1 dynein, cytoplasmic 1, light intermediate chain 1 3 -32542470 NM_016141 3p22.3 Hs.529495 11

nucleotide binding

motor activity

ATP binding

microtubule

dynein complex

 
228962_at -0.827 7.188 -4.134 8.595e-04 0.079 -0.435 PDE4D phosphodiesterase 4D, cAMP-specific (phosphodiesterase E3 dunce homolog, Drosophila) 5 -58300622, -58300622 BF507941 5q12 Hs.117545 89

3',5'-cyclic-AMP phosphodiesterase activity

soluble fraction

insoluble fraction

cytoplasm

centrosome

cytoskeleton

signal transduction

membrane

hydrolase activity

metal ion binding

Purine metabolism

1559965_at -0.734 5.394 -4.131 8.653e-04 0.080 -0.441 LOC100192378 hypothetical LOC100192378 8 -77685669 BC037827 8q21.11 Hs.648649 2    
220044_x_at -0.523 8.877 -4.129 8.676e-04 0.080 -0.443 LUC7L3 LUC7-like 3 (S. cerevisiae) 17 46151975 NM_016424 17q21.33 Hs.130293 15

DNA binding

mRNA binding

protein binding

nucleus

mRNA processing

apoptosis

response to stress

RNA splicing

nuclear speck

 
228790_at -0.961 6.461 -4.129 8.686e-04 0.080 -0.444 FAM110B family with sequence similarity 110, member B 8 59069666 AW264082 8q12.1 Hs.154652 7

cytoplasm

mitochondrion

centrosome

 
1555741_at 0.488 3.722 4.129 8.690e-04 0.080 -0.445 MRAP melanocortin 2 receptor accessory protein 21 32585994, 32585994 AF483549 21q22.1 Hs.584940 12

cytoplasm

endoplasmic reticulum

plasma membrane

integral to membrane

perinuclear region of cytoplasm

 
221567_at -0.458 8.126 -4.127 8.714e-04 0.080 -0.447 NOL3 nucleolar protein 3 (apoptosis repressor with CARD domain) 16 65765370 AF064599 16q21-q23 Hs.513667 22

RNA binding

intracellular

nucleus

nucleolus

cytoplasm

cytosol

mRNA processing

anti-apoptosis

RNA splicing

identical protein binding

regulation of apoptosis

 
220340_at 1.250 6.134 4.126 8.740e-04 0.080 -0.450 KIAA1772 KIAA1772 18 17076200 NM_024935 18q11.1-q11.2 Hs.149020 4

membrane

integral to membrane

 
210719_s_at -0.645 5.457 -4.124 8.770e-04 0.080 -0.453 HMG20B high-mobility group 20B 19 3523942 BC002552 19p13.3 Hs.406534 18

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

cell cycle

chromatin modification

 
217873_at -1.101 9.662 -4.121 8.821e-04 0.080 -0.458 CAB39 calcium binding protein 39 2 231285800, 231286506 NM_016289 2q37.1 Hs.632536 14

protein binding

cytoplasm

mTOR signaling pathway

235440_at -0.521 4.024 -4.120 8.838e-04 0.080 -0.460 SPTY2D1 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) 11 -18584523 BE780878 11p15.1 Hs.268668 Hs.719399 2    
223212_at -0.580 7.546 -4.120 8.850e-04 0.080 -0.462 ZDHHC16 zinc finger, DHHC-type containing 16 10 99195919, 99195936 BC004535 10q24.1 Hs.76662 6

endoplasmic reticulum

apoptosis

zinc ion binding

acyltransferase activity

membrane

integral to membrane

transferase activity

metal ion binding

 
201938_at -0.512 10.263 -4.119 8.862e-04 0.080 -0.463 CDK2AP1 cyclin-dependent kinase 2 associated protein 1 12 -122311492 NM_004642 12q24.31 Hs.719107 15

S phase of mitotic cell cycle

DNA binding

protein binding

nucleus

cytoplasm

DNA-dependent DNA replication

protein amino acid phosphorylation

cell cycle

 
217655_at 0.453 3.262 4.117 8.889e-04 0.080 -0.466 LOC100127972 hypothetical LOC100127972 19   BE552409 19q13.12 Hs.710764 Hs.716895 1    
238799_at -0.544 3.277 -4.117 8.890e-04 0.080 -0.466 ATP5S ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s (factor B) 14 49848796, 49848796 BE968806 14q21.3 Hs.438489 12

mitochondrion

mitochondrial inner membrane

ATP biosynthetic process

ion transport

hydrogen ion transmembrane transporter activity

proton transport

membrane

proton-transporting ATP synthase complex, coupling factor F(o)

 
205830_at 2.159 4.555 4.116 8.922e-04 0.080 -0.469 CLGN calmegin 4 -141529056 NM_004362 4q28.3-q31.1 Hs.86368 11

calcium ion binding

endoplasmic reticulum

protein folding

single fertilization

membrane

integral to membrane

unfolded protein binding

 
240744_at 0.765 5.173 4.115 8.930e-04 0.080 -0.470 CPA5 carboxypeptidase A5 7 129771865, 129771865 AW184014 7q32 Hs.567642 9

metallocarboxypeptidase activity

extracellular region

proteolysis

peptidase activity

metallopeptidase activity

zinc ion binding

metal ion binding

 
222700_at -0.945 7.622 -4.113 8.970e-04 0.080 -0.474 ATL2 atlastin GTPase 2 2 -38375534 AV700003 2p22.2-p22.1 Hs.594950 8

nucleotide binding

GTPase activity

GTP binding

membrane

integral to membrane

 
204094_s_at -0.633 8.315 -4.111 9.012e-04 0.080 -0.478 TSC22D2 TSC22 domain family, member 2 3 151609477 NM_014779 3q25.1 Hs.665220 Hs.715600 5

transcription factor activity

regulation of transcription, DNA-dependent

 
221743_at -0.465 10.502 -4.110 9.028e-04 0.080 -0.480 CUGBP1 CUG triplet repeat, RNA binding protein 1 11 -47446520, -47446520, -47446520 AI472139 11p11 Hs.632137 34

nucleotide binding

translation repressor activity, nucleic acid binding

mRNA binding

nucleus

cytoplasm

mRNA splice site selection

mRNA processing

germ cell development

embryonic development

RNA interference

ribonucleoprotein complex

BRE binding

 
212006_at -0.575 8.019 -4.105 9.117e-04 0.081 -0.489 UBXN4 UBX domain protein 4 2 136215658 AU149908 2q21.3 Hs.591242 12

protein binding

nucleus

nuclear envelope

endoplasmic reticulum

response to unfolded protein

membrane

integral to membrane

 
219737_s_at -1.260 5.413 -4.103 9.151e-04 0.081 -0.492 PCDH9 protocadherin 9 13 -65774967 AI524125 13q14.3-q21.1 Hs.654709 Hs.719302 8

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

 
230098_at -0.697 7.466 -4.103 9.157e-04 0.081 -0.493 PHF20L1 PHD finger protein 20-like 1 8 133856785, 133856785, 133856785 AW612407 8q24.22 Hs.304362 4

nucleic acid binding

protein binding

zinc ion binding

metal ion binding

 
205374_at -0.486 13.454 -4.095 9.308e-04 0.082 -0.508 SLN sarcolipin 11 -107083310 NM_003063 11q22-q23 Hs.334629 12

membrane

integral to membrane

sarcoplasmic reticulum

enzyme regulator activity

regulation of calcium ion transport

 
1554574_a_at -0.636 5.646 -4.093 9.346e-04 0.082 -0.512 CYB5R3 cytochrome b5 reductase 3 22 -41344757, -41344757 AF361370 22q13.2-q13.31 22q13.31-qter Hs.700572 49

cytochrome-b5 reductase activity

cytoplasm

mitochondrion

mitochondrial outer membrane

mitochondrial inner membrane

endoplasmic reticulum

endoplasmic reticulum membrane

hemoglobin complex

cholesterol biosynthetic process

blood circulation

electron carrier activity

membrane

oxidoreductase activity

oxidation reduction

Amino sugar and nucleotide sugar metabolism

228310_at -0.831 5.551 -4.090 9.393e-04 0.082 -0.516 ENAH enabled homolog (Drosophila) 1 -223741156 BF223300 1q42.12 Hs.497893 37

actin binding

cytoplasm

cytoskeleton

focal adhesion

SH3 domain binding

lamellipodium

cell junction

filopodium

synapse

intracellular transport

WW domain binding

Regulation of actin cytoskeleton

212268_at -0.836 6.390 -4.088 9.431e-04 0.083 -0.520 SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 6 -2778732 NM_030666 6p25 Hs.381167 18

serine-type endopeptidase inhibitor activity

cytoplasm

peptidase inhibitor activity

 
214541_s_at -0.807 5.840 -4.088 9.436e-04 0.083 -0.520 QKI quaking homolog, KH domain RNA binding (mouse) 6 163755664, 163755664 AF142418 6q26 6q26-q27 Hs.510324 Hs.593520 23

RNA binding

protein binding

nucleus

nucleolus

cytoplasm

plasma membrane

mRNA processing

regulation of translation

transport

multicellular organismal development

RNA splicing

SH3 domain binding

cell differentiation

mRNA transport

 
214960_at -0.630 5.476 -4.087 9.467e-04 0.083 -0.523 API5 apoptosis inhibitor 5 11 43290080 AF229253 11p11.2 Hs.435771 15

binding

nucleus

spliceosomal complex

cytoplasm

apoptosis

anti-apoptosis

anti-apoptosis

anti-apoptosis

fibroblast growth factor binding

 
205149_s_at -0.838 5.396 -4.084 9.519e-04 0.083 -0.528 CLCN4 chloride channel 4 X 10084984 NM_001830 Xp22.3 Hs.495674 17

nucleotide binding

ion channel activity

voltage-gated chloride channel activity

ATP binding

endosome

ion transport

chloride transport

antiporter activity

membrane

integral to membrane

chloride ion binding

 
206453_s_at -0.822 11.058 -4.082 9.547e-04 0.083 -0.531 NDRG2 NDRG family member 2 14 -20554761, -20554761 NM_016250 14q11.2 Hs.525205 42

molecular_function

nucleus

cytoplasm

Golgi apparatus

centrosome

cytosol

multicellular organismal development

nervous system development

cell differentiation

perinuclear region of cytoplasm

 
202566_s_at -0.997 9.802 -4.082 9.553e-04 0.083 -0.532 SVIL supervillin 10 -29786282, -29786282 AF051851 10p11.2 Hs.499209 23

podosome

calcium ion binding

nucleus

cytoplasm

plasma membrane

cytoskeleton organization

skeletal muscle tissue development

cell projection

costamere

actin filament binding

 
204742_s_at -0.753 6.154 -4.081 9.581e-04 0.083 -0.534 PDS5B PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae) 13 32058591 NM_015032 13q12.3 Hs.716441 15

chromatin

DNA binding

ATP binding

nucleus

cell cycle

mitotic sister chromatid cohesion

mitosis

negative regulation of cell proliferation

identical protein binding

cell division

 
204408_at 0.452 5.554 4.079 9.614e-04 0.083 -0.538 APEX2 APEX nuclease (apurinic/apyrimidinic endonuclease) 2 X 55043504 NM_014481 Xp11.21 Hs.659558 8

DNA binding

DNA-(apurinic or apyrimidinic site) lyase activity

endonuclease activity

intracellular

nucleus

mitochondrion

DNA repair

response to DNA damage stimulus

zinc ion binding

lyase activity

Base excision repair

230055_at 0.554 5.283 4.078 9.626e-04 0.083 -0.539 KHDC1 KH homology domain containing 1 6 -74007758 AL037414 6q13 Hs.715645 4

RNA binding

membrane

integral to membrane

 
215559_at -1.665 5.747 -4.076 9.668e-04 0.083 -0.543 ABCC6 ATP-binding cassette, sub-family C (CFTR/MRP), member 6 16 -16222544, -16150922 AI074459 16p13.1 Hs.442182 70

nucleotide binding

transporter activity

ATP binding

plasma membrane

transport

visual perception

integral to membrane

ATPase activity

response to drug

ATPase activity, coupled to transmembrane movement of substances

response to stimulus

ABC transporters

224832_at -0.596 7.087 -4.076 9.672e-04 0.083 -0.543 DUSP16 dual specificity phosphatase 16 12 -12520097 AB051487 12p13 Hs.536535 12

inactivation of MAPK activity

protein tyrosine phosphatase activity

protein binding

nucleus

cytoplasm

protein amino acid dephosphorylation

hydrolase activity

MAP kinase tyrosine/serine/threonine phosphatase activity

MAPK export from nucleus

MAPK phosphatase export from nucleus, leptomycin B sensitive

MAPK signaling pathway

212010_s_at -0.636 10.577 -4.076 9.674e-04 0.083 -0.543 CDV3 CDV3 homolog (mouse) 3 134775123, 134775990 AK025647 3q22.1 Hs.518265 11

molecular_function

cellular_component

cytoplasm

cell proliferation

 
207145_at -1.080 4.700 -4.076 9.675e-04 0.083 -0.543 MSTN myostatin 2 -190628670 NM_005259 2q32.2 Hs.41565 55

cytokine activity

extracellular region

extracellular space

transforming growth factor beta receptor signaling pathway

muscle organ development

growth factor activity

growth

positive regulation of transcription

 
206625_at -1.616 6.668 -4.076 9.684e-04 0.083 -0.544 PRPH2 peripherin 2 (retinal degeneration, slow) 6 -42772310 NM_000322 6p21.2-p12.3 Hs.654489 57

protein binding

cell adhesion

visual perception

membrane

integral to membrane

response to stimulus

retina development in camera-type eye

Amyotrophic lateral sclerosis (ALS)

226561_at -0.868 5.722 -4.074 9.705e-04 0.083 -0.546 AGFG1 ArfGAP with FG repeats 1 2 228045131 BE551849 2q36.3 Hs.352962 29

DNA binding

RNA binding

protein binding

nucleus

nuclear pore

Golgi apparatus

mRNA export from nucleus

transport

multicellular organismal development

spermatogenesis

ARF GTPase activator activity

zinc ion binding

cell differentiation

cytoplasmic vesicle

regulation of ARF GTPase activity

metal ion binding

 
217943_s_at -0.850 8.997 -4.074 9.714e-04 0.083 -0.547 MAP7D1 MAP7 domain containing 1 1 36394389 NM_018067 1p34.3 Hs.700595 7

spindle

 
225003_at -0.576 8.568 -4.073 9.734e-04 0.083 -0.549 TMEM205 transmembrane protein 205 19 -11314451 BF343862 19p13.2 Hs.8036 2

membrane

integral to membrane

 
201898_s_at -0.496 8.762 -4.072 9.755e-04 0.083 -0.551 UBE2A ubiquitin-conjugating enzyme E2A (RAD6 homolog) X 118592526, 118598325 AI126625 Xq24-q25 Hs.379466 16

nucleotide binding

chromatin

ubiquitin-protein ligase activity

ATP binding

postreplication repair

ubiquitin-dependent protein catabolic process

response to DNA damage stimulus

positive regulation of cell proliferation

response to UV

ligase activity

ubiquitin protein ligase binding

histone H2A ubiquitination

post-translational protein modification

regulation of protein metabolic process

protein autoubiquitination

Ubiquitin mediated proteolysis

1555960_at -0.664 4.400 -4.070 9.792e-04 0.083 -0.554 HINT1 histidine triad nucleotide binding protein 1 5 -130522773, -130522773 AK054976 5q31.2 Hs.483305 26

protein kinase C binding

nucleus

cytoplasm

cytoskeleton

signal transduction

hydrolase activity

 
201573_s_at -0.641 8.422 -4.068 9.842e-04 0.083 -0.559 ETF1 eukaryotic translation termination factor 1 5 -137869682 M75715 5q31.1 Hs.483494 32

RNA binding

protein binding

cytoplasm

regulation of translational termination

protein amino acid methylation

translation release factor activity, codon specific

ribosome binding

 
220929_at 0.427 5.086 4.067 9.860e-04 0.083 -0.561 GALNT8 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8) 12 4700012 NM_017417 12p13.3 Hs.511985 2

polypeptide N-acetylgalactosaminyltransferase activity

calcium ion binding

sugar binding

Golgi apparatus

membrane

integral to membrane

transferase activity, transferring glycosyl groups

manganese ion binding

O-Glycan biosynthesis

Metabolic pathways

1555427_s_at -0.798 5.246 -4.063 9.942e-04 0.084 -0.568 SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 6 -86380411, -86380411, -86374221, -86374221, -86374221, -86374221 AY034482 6q14-q15 Hs.571177 33

nucleotide binding

RNA binding

protein binding

nucleus

nucleoplasm

spliceosomal complex

cytoplasm

endoplasmic reticulum

microsome

mRNA processing

poly(A) RNA binding

RNA splicing

interspecies interaction between organisms

 
228921_at 0.565 4.254 4.062 9.955e-04 0.084 -0.570 SLC25A42 solute carrier family 25, member 42 19 19035807 AW170609 19p13.11 Hs.303669 3

binding

mitochondrion

mitochondrial inner membrane

transport

membrane

integral to membrane

 
218735_s_at 1.044 5.646 4.060 9.996e-04 0.084 -0.573 ZNF544 zinc finger protein 544 19 63431881 AA349848 19q13.43 Hs.438994 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1555793_a_at 0.769 4.722 4.060 9.999e-04 0.084 -0.574 ZFP82 zinc finger protein 82 homolog (mouse) 19 -41574700 AL834267 19q13.12 Hs.558734 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
225719_s_at 0.441 7.148 4.060 1.000e-03 0.084 -0.574 MRPL55 mitochondrial ribosomal protein L55 1 -226361002 BG497783 1q42.13 Hs.63236 11

structural constituent of ribosome

mitochondrion

mitochondrial large ribosomal subunit

ribosome

translation

 
235132_at -0.580 6.248 -4.059 1.002e-03 0.084 -0.576 LOC254128 hypothetical protein LOC254128 2   BF939830 2q14.2 Hs.712685 1    
204927_at 0.323 6.532 4.059 1.002e-03 0.084 -0.576 RASSF7 Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 11 550970, 551449 NM_003475 11p15.5 Hs.72925 9

DNA binding

protein binding

nucleus

regulation of transcription, DNA-dependent

signal transduction

 
235721_at 0.428 6.811 4.058 1.003e-03 0.084 -0.576 DTX3 deltex homolog 3 (Drosophila) 12 56284870 N62126 12q13.3 Hs.32374 6

protein binding

cytoplasm

Notch signaling pathway

zinc ion binding

metal ion binding

Notch signaling pathway

228882_at 0.739 5.286 4.058 1.004e-03 0.084 -0.577 TUB tubby homolog (mouse) 11 8016755, 8059484 AL042088 11p15.5 Hs.231850 Hs.568986 16

nucleus

cytoplasm

response to stimulus

 
226208_at -1.112 6.233 -4.058 1.004e-03 0.084 -0.578 ZSWIM6 zinc finger, SWIM-type containing 6 5 60663856 AI692595 5q12.1 Hs.650537 5

zinc ion binding

metal ion binding

 
1552616_a_at 0.474 5.767 4.057 1.006e-03 0.084 -0.579 ACACB acetyl-Coenzyme A carboxylase beta 12 108061584 NM_001093 12q24.11 Hs.234898 22

nucleotide binding

acetyl-CoA carboxylase activity

biotin carboxylase activity

ATP binding

cytoplasm

Golgi apparatus

cytosol

fatty acid biosynthetic process

metabolic process

biotin binding

membrane

ligase activity

manganese ion binding

regulation of fatty acid oxidation

metal ion binding

Fatty acid biosynthesis

Pyruvate metabolism

Propanoate metabolism

Metabolic pathways

Insulin signaling pathway

Adipocytokine signaling pathway

242835_s_at -0.663 5.308 -4.054 1.012e-03 0.084 -0.585 LOC728730 hypothetical LOC728730 2   AW772084 2p22.1        
203575_at -0.514 7.110 -4.053 1.014e-03 0.084 -0.587 CSNK2A2 casein kinase 2, alpha prime polypeptide 16 -56749312 NM_001896 16q21 Hs.82201 143

nucleotide binding

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

Wnt receptor signaling pathway

transferase activity

protein N-terminus binding

regulation of cell cycle

Wnt signaling pathway

Adherens junction

Tight junction

204000_at 0.522 5.556 4.051 1.018e-03 0.084 -0.590 GNB5 guanine nucleotide binding protein (G protein), beta 5 15 -50200414, -50200414 NM_016194 15q21.2 Hs.155090 26

GTPase activity

signal transducer activity

protein binding

nucleus

heterotrimeric G-protein complex

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

Chemokine signaling pathway

226380_at -0.592 6.509 -4.049 1.022e-03 0.084 -0.594 PTPN21 protein tyrosine phosphatase, non-receptor type 21 14 -88001874 N21442 14q31.3 Hs.437040 10

protein tyrosine phosphatase activity

binding

cytoplasm

cytoskeleton

protein amino acid dephosphorylation

hydrolase activity

 
235593_at -1.176 3.420 -4.045 1.031e-03 0.085 -0.602 ZEB2 zinc finger E-box binding homeobox 2 2 -144862052 AL546529 2q22.3 Hs.34871 49

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

nervous system development

zinc ion binding

negative regulation of transcription

phosphatase regulator activity

sequence-specific DNA binding

SMAD binding

metal ion binding

 
201298_s_at -0.518 7.583 -4.045 1.032e-03 0.085 -0.602 MOBKL1B MOB1, Mps One Binder kinase activator-like 1B (yeast) 2 -74236718 BC003398 2p13.1 Hs.196437 12

protein binding

zinc ion binding

metal ion binding

 
229459_at -0.617 2.636 -4.044 1.032e-03 0.085 -0.602 FAM19A5 family with sequence similarity 19 (chemokine (C-C motif)-like), member A5 22 47263951, 47350781 AV723914 22q13.32 Hs.436854 Hs.632788 8

extracellular region

membrane

integral to membrane

 
224352_s_at -0.705 11.148 -4.044 1.033e-03 0.085 -0.603 CFL2 cofilin 2 (muscle) 14 -34249338, -34249338, -34249338 AF134802 14q12 Hs.180141 20

actin binding

protein binding

intracellular

nucleus

cytoplasm

cytoskeleton

nuclear matrix

Axon guidance

Fc gamma R-mediated phagocytosis

Regulation of actin cytoskeleton

207797_s_at -0.554 4.932 -4.041 1.038e-03 0.085 -0.608 LRP2BP LRP2 binding protein 4 -186522026 NM_018409 4q35.1 Hs.558513 4

protein binding

cytoplasm

 
225662_at -0.621 11.537 -4.034 1.055e-03 0.086 -0.623 ZAK sterile alpha motif and leucine zipper containing kinase AZK 2 173648810, 173648810 H28667 2q24.2 Hs.444451 24

cell cycle checkpoint

DNA damage checkpoint

nucleotide binding

activation of MAPKK activity

magnesium ion binding

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

protein tyrosine kinase activity

ATP binding

nucleus

cytoplasm

response to stress

cell cycle

cell cycle arrest

protein kinase cascade

activation of JUN kinase activity

cell death

cell proliferation

response to radiation

transferase activity

cell differentiation

identical protein binding

positive regulation of apoptosis

MAPK signaling pathway

Tight junction

213831_at 2.383 3.957 4.033 1.055e-03 0.086 -0.623 HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1 6 32713160 X00452 6p21.3 Hs.387679 Hs.706240 542

antigen processing and presentation of peptide or polysaccharide antigen via MHC class II

plasma membrane

integral to plasma membrane

immune response

immune response

membrane

integral to membrane

MHC class II receptor activity

MHC class II receptor activity

MHC class II protein complex

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

227239_at -1.149 8.467 -4.032 1.059e-03 0.086 -0.626 FAM126A family with sequence similarity 126, member A 7 -22947402 AV734839 7p15.3 Hs.85603 9

signal transducer activity

cellular_component

cytoplasm

biological_process

membrane

 
221935_s_at -0.921 5.848 -4.029 1.066e-03 0.087 -0.632 C3orf64 chromosome 3 open reading frame 64 3 -69107057 AK023140 3p14.1 Hs.518059 2

extracellular region

endoplasmic reticulum

transferase activity, transferring glycosyl groups

 
221536_s_at -0.804 6.968 -4.024 1.076e-03 0.087 -0.641 LSG1 large subunit GTPase 1 homolog (S. cerevisiae) 3 -195842806 AL136897 3q29 Hs.518505 12

nucleotide binding

GTP binding

intracellular

nucleus

cytoplasm

endoplasmic reticulum

Cajal body

protein transport

hydrolase activity

nuclear export

 
226184_at -0.824 6.725 -4.023 1.078e-03 0.087 -0.643 FMNL2 formin-like 2 2 152899996 AI123567 2q23.3 Hs.654630 9

actin binding

cytoplasm

cellular component organization

Rho GTPase binding

actin cytoskeleton organization

 
222815_at -0.709 4.330 -4.020 1.084e-03 0.087 -0.648 RLIM ring finger protein, LIM domain interacting X -73719537 BE966018 Xq13-q21 Hs.653288 9

transcription corepressor activity

ubiquitin-protein ligase activity

protein binding

zinc ion binding

negative regulation of transcription

ligase activity

transcriptional repressor complex

modification-dependent protein catabolic process

metal ion binding

 
224906_at -0.646 8.706 -4.020 1.084e-03 0.087 -0.648 ANO6 anoctamin 6 12 43896036, 43896036, 43896142, 43972732 AL041280 12q12 Hs.696326 6

ion channel activity

chloride channel activity

calcium ion binding

ion transport

membrane

integral to membrane

chloride ion binding

chloride channel complex

 
223229_at -0.799 6.718 -4.019 1.087e-03 0.088 -0.651 UBE2T ubiquitin-conjugating enzyme E2T (putative) 1 -200567408 AB032931 1q32.1 Hs.5199 10

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

 
215903_s_at -0.482 8.195 -4.018 1.089e-03 0.088 -0.652 MAST2 microtubule associated serine/threonine kinase 2 1 46041871 BE786598 1p34.1 Hs.319481 19

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

cytoskeleton

plasma membrane

protein amino acid phosphorylation

transferase activity

phosphatase binding

regulation of interleukin-12 biosynthetic process

spermatid differentiation

 
202847_at 1.315 4.676 4.015 1.097e-03 0.088 -0.658 PCK2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) 14 23633322, 23633322 NM_004563 14q11.2 Hs.75812 9

phosphoenolpyruvate carboxykinase (GTP) activity

GTP binding

mitochondrion

gluconeogenesis

lyase activity

purine nucleotide binding

manganese ion binding

metal ion binding

Glycolysis / Gluconeogenesis

Citrate cycle (TCA cycle)

Pyruvate metabolism

Metabolic pathways

PPAR signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

217835_x_at -0.784 11.038 -4.015 1.097e-03 0.088 -0.659 C20orf24 chromosome 20 open reading frame 24 20 34667580, 34667605 NM_018840 20q11.23 Hs.584985 7

molecular_function

protein binding

cellular_component

biological_process

 
213327_s_at -0.594 6.620 -4.014 1.097e-03 0.088 -0.659 USP12 ubiquitin specific peptidase 12 13 -26540437 AI820101 13q12.13 Hs.42400 6

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

protein binding

cellular_component

protein modification process

ubiquitin-dependent protein catabolic process

peptidase activity

protein deubiquitination

 
202056_at -0.887 8.604 -4.014 1.099e-03 0.088 -0.660 KPNA1 karyopherin alpha 1 (importin alpha 5) 3 -123623437 AW051311 3q21 Hs.161008 92

regulation of DNA recombination

protein binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

cytosol

NLS-bearing substrate import into nucleus

intracellular protein transport

nuclear localization sequence binding

protein transporter activity

interspecies interaction between organisms

 
205383_s_at -0.529 8.745 -4.012 1.102e-03 0.088 -0.663 ZBTB20 zinc finger and BTB domain containing 20 3 -115540212 NM_015642 3q13.2 Hs.655108 13

DNA binding

protein binding

intracellular

nucleus

nucleolus

zinc ion binding

regulation of transcription

metal ion binding

 
214455_at -1.615 3.861 -4.010 1.108e-03 0.088 -0.668 HIST1H2BC histone cluster 1, H2bc 6 -26231673 NM_003526 6p21.3 Hs.658713 10

nucleosome

DNA binding

protein binding

nucleus

chromosome

nucleosome assembly

defense response to bacterium

Systemic lupus erythematosus

206356_s_at -0.957 5.119 -4.009 1.109e-03 0.088 -0.668 GNAL guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type 18 11679135, 11741561 NM_002071 18p11.22-p11.21 Hs.136295 16

nucleotide binding

GTPase activity

signal transducer activity

GTP binding

signal transduction

G-protein coupled receptor protein signaling pathway

guanyl nucleotide binding

Calcium signaling pathway

Olfactory transduction

201604_s_at -0.629 6.274 -4.008 1.111e-03 0.088 -0.671 PPP1R12A protein phosphatase 1, regulatory (inhibitor) subunit 12A 12 -78691474, -78691474, -78691474 NM_002480 12q15-q21 Hs.49582 41

signal transducer activity

protein binding

cytoplasm

Vascular smooth muscle contraction

Focal adhesion

Long-term potentiation

Regulation of actin cytoskeleton

214787_at -0.607 3.839 -4.006 1.117e-03 0.088 -0.675 DENND4A DENN/MADD domain containing 4A 15 -63740012 BE268538 15q22.31 Hs.654567 8

DNA binding

protein binding

nucleus

regulation of transcription, DNA-dependent

 
214663_at -0.454 6.017 -4.005 1.118e-03 0.088 -0.676 DSTYK dual serine/threonine and tyrosine protein kinase 1 -203378254 AB007941 1q32.1 Hs.6874 9

nucleotide binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

transferase activity

 
227523_s_at -0.582 6.197 -4.005 1.118e-03 0.088 -0.676 PHF20L1 PHD finger protein 20-like 1 8 133856785, 133856785, 133856785 AA192936 8q24.22 Hs.304362 4

nucleic acid binding

protein binding

zinc ion binding

metal ion binding

 
223294_at -0.694 7.370 -3.997 1.136e-03 0.090 -0.691 CXorf26 chromosome X open reading frame 26 X 75309172 BC001220 Xq13.3 Hs.370100 6

molecular_function

cellular_component

biological_process

 
223598_at -0.807 9.548 -3.997 1.137e-03 0.090 -0.692 RAD23B RAD23 homolog B (S. cerevisiae) 9 109085364 AF262027 9q31.2 Hs.521640 54

nucleotide-excision repair, DNA damage removal

damaged DNA binding

single-stranded DNA binding

protein binding

nucleus

nucleoplasm

cytoplasm

cytosol

response to DNA damage stimulus

modification-dependent protein catabolic process

proteasomal ubiquitin-dependent protein catabolic process

protein complex

Nucleotide excision repair

222433_at -1.103 8.250 -3.996 1.140e-03 0.090 -0.694 ENAH enabled homolog (Drosophila) 1 -223741156 AK025108 1q42.12 Hs.497893 37

actin binding

cytoplasm

cytoskeleton

focal adhesion

SH3 domain binding

lamellipodium

cell junction

filopodium

synapse

intracellular transport

WW domain binding

Regulation of actin cytoskeleton

218868_at -0.485 5.920 -3.995 1.142e-03 0.090 -0.696 ACTR3B ARP3 actin-related protein 3 homolog B (yeast) 7 152087783 NM_020445 7q36.1 Hs.647117 8

nucleotide binding

actin binding

protein binding

ATP binding

cytoplasm

cytoskeleton

regulation of actin filament polymerization

cell projection

 
235753_at 0.787 7.886 3.994 1.144e-03 0.090 -0.698 HOXA7 homeobox A7 7 -27159862 AI492051 7p15-p14 Hs.660918 24

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anterior/posterior pattern formation

transcription repressor activity

sequence-specific DNA binding

negative regulation of keratinocyte differentiation

positive regulation of transcription from RNA polymerase II promoter

embryonic skeletal system morphogenesis

 
206289_at 0.682 6.561 3.993 1.146e-03 0.090 -0.699 HOXA4 homeobox A4 7 -27134650 NM_002141 7p15-p14 Hs.533357 Hs.714774 22

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anatomical structure morphogenesis

anterior/posterior pattern formation

sequence-specific DNA binding

embryonic skeletal system morphogenesis

 
203837_at 1.191 6.437 3.992 1.148e-03 0.090 -0.701 MAP3K5 mitogen-activated protein kinase kinase kinase 5 6 -136919879 NM_005923 6q22.33 Hs.186486 108

MAPKKK cascade

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

ATP binding

protein amino acid phosphorylation

apoptosis

activation of JUN kinase activity

induction of apoptosis by extracellular signals

caspase activator activity

transferase activity

protein homodimerization activity

interspecies interaction between organisms

MAPK signaling pathway

Neurotrophin signaling pathway

Amyotrophic lateral sclerosis (ALS)

219343_at -1.246 8.355 -3.991 1.151e-03 0.090 -0.703 CDC37L1 cell division cycle 37 homolog (S. cerevisiae)-like 1 9 4669565 NM_017913 9p24.1 Hs.561954 6

protein binding

cytoplasm

 
226395_at -0.950 7.792 -3.990 1.153e-03 0.090 -0.704 HOOK3 hook homolog 3 (Drosophila) 8 42871189 AI912618 8p11.21 Hs.162852 13

cytoplasm

Golgi apparatus

cis-Golgi network

cytoskeleton

microtubule

endosome organization

lysosome organization

microtubule binding

endosome to lysosome transport

protein transport

HOPS complex

cytoplasmic microtubule organization

identical protein binding

early endosome to late endosome transport

Golgi localization

FHF complex

 
213376_at -0.676 6.831 -3.989 1.156e-03 0.090 -0.707 ZBTB1 zinc finger and BTB domain containing 1 14 64041044, 64041044 AI656706 14q23.3 Hs.655536 6

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
225607_at -0.559 8.256 -3.988 1.159e-03 0.090 -0.709 CCDC43 coiled-coil domain containing 43 17 -40110330 AI948491 17q21.31 Hs.579115 2    
231973_s_at -1.062 4.745 -3.986 1.164e-03 0.090 -0.713 ANAPC1 anaphase promoting complex subunit 1 2 -112243110 AK001223 2q12.1 Hs.436527 26

nucleoplasm

cytosol

cell cycle

mitosis

modification-dependent protein catabolic process

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

cell division

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

232902_s_at -0.622 5.887 -3.982 1.172e-03 0.091 -0.720 RARS2 arginyl-tRNA synthetase 2, mitochondrial 6 -88280815 BG165118 6q16.1 Hs.485910 8

nucleotide binding

arginine-tRNA ligase activity

protein binding

ATP binding

cytoplasm

mitochondrion

mitochondrial matrix

arginyl-tRNA aminoacylation

ligase activity

Aminoacyl-tRNA biosynthesis

223422_s_at -1.458 6.120 -3.982 1.173e-03 0.091 -0.720 ARHGAP24 Rho GTPase activating protein 24 4 86615307, 86918874, 87070449 AI743534 4q21.23-q21.3 Hs.444229 14

angiogenesis

GTPase activator activity

protein binding

intracellular

cytoplasm

cytoskeleton

adherens junction

focal adhesion

signal transduction

multicellular organismal development

cell junction

cell differentiation

cell projection

 
201388_at -0.521 7.184 -3.981 1.176e-03 0.091 -0.723 PSMD3 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 17 35390585 NM_002809 17q21.1 Hs.12970 34

proteasome complex

protein binding

cytosol

enzyme regulator activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

regulation of protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

225053_at -0.548 10.293 -3.980 1.177e-03 0.091 -0.724 CNOT7 CCR4-NOT transcription complex, subunit 7 8 -17133392, -17131110 W94952 8p22-p21.3 Hs.645009 Hs.719129 19

nucleic acid binding

transcription factor activity

signal transducer activity

protein binding

nucleus

carbohydrate metabolic process

signal transduction

transcription activator activity

CCR4-NOT complex

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

RNA degradation

206576_s_at 0.504 6.075 3.977 1.184e-03 0.091 -0.729 CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 19 -47703297 NM_001712 19q13.2 Hs.512682 97

angiogenesis

molecular_function

extracellular region

membrane fraction

plasma membrane

plasma membrane

integral to plasma membrane

homophilic cell adhesion

integrin-mediated signaling pathway

cell migration

 
219263_at -0.991 6.831 -3.977 1.185e-03 0.091 -0.729 RNF128 ring finger protein 128 X 105823723, 105856549 NM_024539 Xq22.3 Hs.496542 13

protein binding

cytoplasm

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

metal ion binding

perinuclear region of cytoplasm

 
205003_at 0.504 7.291 3.976 1.188e-03 0.091 -0.732 DOCK4 dedicator of cytokinesis 4 7 -111153399 NM_014705 7q31.1 Hs.654652 16

guanyl-nucleotide exchange factor activity

protein binding

membrane

SH3 domain binding

PDZ domain binding

Rac GTPase activator activity

stereocilium

Rac GTPase binding

 
212689_s_at -0.995 6.775 -3.976 1.188e-03 0.091 -0.732 KDM3A lysine (K)-specific demethylase 3A 2 86521781, 86522094 AA524505 2p11.2 Hs.557425 11

iron ion binding

nucleus

cytoplasm

spermatogenesis

zinc ion binding

hormone-mediated signaling

oxidoreductase activity

chromatin modification

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

cell differentiation

androgen receptor signaling pathway

histone H3-K9 demethylation

positive regulation of transcription

formaldehyde biosynthetic process

metal ion binding

androgen receptor binding

oxidation reduction

 
226606_s_at 1.157 6.176 3.975 1.189e-03 0.091 -0.733 GTPBP5 GTP binding protein 5 (putative) 20 60191475 AI860690 20q13.33 Hs.340636 6

nucleotide binding

GTP binding

intracellular

mitochondrion

ribosome biogenesis

 
201199_s_at -0.583 9.140 -3.974 1.193e-03 0.091 -0.735 PSMD1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 2 231629852 NM_002807 2q37.1 Hs.3887 43

proteasome complex

protein binding

cytosol

proteasome regulatory particle

enzyme regulator activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

regulation of protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

204264_at 0.933 7.437 3.972 1.197e-03 0.091 -0.739 CPT2 carnitine palmitoyltransferase 2 1 53434688 NM_000098 1p32 Hs.713535 53

carnitine O-palmitoyltransferase activity

carnitine O-palmitoyltransferase activity

mitochondrion

mitochondrial inner membrane

mitochondrial inner membrane

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

transport

carnitine shuttle

acyltransferase activity

membrane

transferase activity

regulation of fatty acid oxidation

Fatty acid metabolism

PPAR signaling pathway

224298_s_at -0.670 7.624 -3.970 1.202e-03 0.091 -0.743 UBAC2 UBA domain containing 2 13 98650679, 98651163 BC004528 13q32.3 Hs.508545 6

membrane

integral to membrane

 
225033_at -0.641 6.709 -3.969 1.204e-03 0.091 -0.744 ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 8 -134536272 AV721528 8q24.22 Hs.374257 20

beta-galactoside alpha-2,3-sialyltransferase activity

extracellular region

Golgi apparatus

protein amino acid glycosylation

membrane

integral to membrane

integral to Golgi membrane

O-Glycan biosynthesis

Keratan sulfate biosynthesis

Glycosphingolipid biosynthesis - globo series

Glycosphingolipid biosynthesis - ganglio series

Metabolic pathways

226230_at -0.692 6.581 -3.967 1.208e-03 0.092 -0.747 SMEK2 SMEK homolog 2, suppressor of mek1 (Dictyostelium) 2 -55629017 AA541716 2p16.1 Hs.516182 16

protein binding

nucleus

cytoplasm

centrosome

 
216178_x_at -1.199 7.325 -3.964 1.216e-03 0.092 -0.753 ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 10 -33236244, -33229251, -33229251, -33229251 AA215854 10p11.2 Hs.643813 512

G1/S transition of mitotic cell cycle

in utero embryonic development

cell fate specification

receptor activity

integrin binding

focal adhesion

cellular defense response

cell adhesion

homophilic cell adhesion

leukocyte adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

positive regulation of cell proliferation

integrin complex

germ cell migration

cell surface

integral to membrane

synaptosome

B cell differentiation

neuromuscular junction

ruffle membrane

cell-cell adhesion mediated by integrin

sarcolemma

melanosome

identical protein binding

interspecies interaction between organisms

sarcomere organization

negative regulation of cell differentiation

protein heterodimerization activity

regulation of cell cycle

cardiac muscle cell differentiation

Axon guidance

Focal adhesion

ECM-receptor interaction

Cell adhesion molecules (CAMs)

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Pathogenic Escherichia coli infection - EHEC

Pathways in cancer

Small cell lung cancer

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

205656_at 0.511 5.810 3.963 1.218e-03 0.092 -0.755 PCDH17 protocadherin 17 13 57103789 NM_014459 13q21.1 Hs.106511 11

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

 
211063_s_at -0.475 8.090 -3.963 1.219e-03 0.092 -0.755 NCK1 NCK adaptor protein 1 3 138063762 BC006403 3q21 Hs.477693 110

receptor binding

cytoplasm

endoplasmic reticulum

regulation of translation

actin filament organization

signal complex assembly

cytoskeletal adaptor activity

vesicle membrane

cell migration

protein domain specific binding

lamellipodium assembly

receptor signaling complex scaffold activity

positive regulation of actin filament polymerization

positive regulation of T cell proliferation

T cell activation

ErbB signaling pathway

Axon guidance

T cell receptor signaling pathway

Pathogenic Escherichia coli infection - EHEC

210479_s_at -1.208 6.339 -3.963 1.220e-03 0.092 -0.756 RORA RAR-related orphan receptor A 15 -58567776, -58567776, -58567776 L14611 15q22.2 Hs.560343 Hs.655155 33

transcription factor activity

steroid hormone receptor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

nitric oxide biosynthetic process

signal transduction

zinc ion binding

cerebellar Purkinje cell differentiation

regulation of macrophage activation

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

cGMP metabolic process

metal ion binding

 
202128_at -0.653 6.577 -3.962 1.222e-03 0.092 -0.758 KIAA0317 KIAA0317 14 -74197707 NM_014821 14q24.3 Hs.497417 4

intracellular

protein modification process

membrane

integral to membrane

acid-amino acid ligase activity

modification-dependent protein catabolic process

 
205040_at 0.746 4.148 3.962 1.222e-03 0.092 -0.758 ORM1 orosomucoid 1 9 116125123 NM_000607 9q31-q32 Hs.522356 55

regulation of immune system process

protein binding

extracellular region

extracellular space

acute-phase response

inflammatory response

 
214356_s_at -0.500 9.260 -3.960 1.226e-03 0.092 -0.761 KIAA0368 KIAA0368 9 -113162793 AI272899 9q31.3 Hs.368255 12

proteasome complex

binding

nucleus

early endosome

late endosome

endoplasmic reticulum

ER-Golgi intermediate compartment

trans-Golgi network

centrosome

cytosol

cytoplasmic membrane-bounded vesicle

ER to Golgi transport vesicle

ER-associated protein catabolic process

 
230876_at 0.922 2.974 3.958 1.231e-03 0.092 -0.765 LOC169834 hypothetical protein LOC169834 9 -114799220 AI827906 9q32 Hs.192877 1    
224565_at -0.997 10.792 -3.952 1.247e-03 0.093 -0.776 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 11 64946844, 64946844 BE675516 11q13.1 Hs.523789 Hs.648467 6    
200973_s_at -0.983 9.408 -3.952 1.247e-03 0.093 -0.776 TSPAN3 tetraspanin 3 15 -75125385 NM_005724 15q24.3 Hs.5062 Hs.716484 8

membrane

integral to membrane

 
220359_s_at -1.864 4.646 -3.950 1.252e-03 0.094 -0.780 ARPP-21 cyclic AMP-regulated phosphoprotein, 21 kD 3 35658852, 35696119, 35697432 NM_016300 3p22.3 Hs.475902 Hs.713605 7

molecular_function

nucleic acid binding

cellular_component

cytoplasm

biological_process

 
226632_at 0.413 6.270 3.948 1.256e-03 0.094 -0.783 CYGB cytoglobin 17 -72035034 AL513673 17q25.3 Hs.95120 28

peroxidase activity

oxygen transporter activity

cytoplasm

transport

response to oxidative stress

oxygen transport

oxygen binding

heme binding

neuron projection

cell soma

metal ion binding

 
239183_at -1.145 6.216 -3.947 1.259e-03 0.094 -0.785 ANGPTL1 angiopoietin-like 1 1 -177085292 W67461 1q25.2 Hs.591474 19

receptor binding

extracellular region

extracellular space

signal transduction

 
212835_at -1.010 6.466 -3.947 1.260e-03 0.094 -0.786 FAM175B family with sequence similarity 175, member B 10 126480343 AA777641 10q26.13 Hs.280695 10

protein binding

polyubiquitin binding

BRISC complex

 
202919_at -0.628 8.679 -3.946 1.262e-03 0.094 -0.787 MOBKL3 MOB1, Mps One Binder kinase activator-like 3 (yeast) 2 198088564, 198089015 NM_015387 2q33.1 Hs.645458 13

protein binding

cytoplasm

Golgi apparatus

transport

zinc ion binding

membrane

metal ion binding

perinuclear region of cytoplasm

 
232473_at 0.609 4.405 3.942 1.274e-03 0.094 -0.796 PRPF18 PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae) 10 13668944 AU144329 10p13 Hs.161181 6

nucleus

spliceosomal complex

mRNA processing

RNA splicing

nuclear speck

 
201027_s_at -0.579 7.408 -3.941 1.277e-03 0.094 -0.798 EIF5B eukaryotic translation initiation factor 5B 2 99320265 NM_015904 2q11.2 Hs.158688 15

nucleotide binding

translation initiation factor activity

translation initiation factor activity

GTPase activity

protein binding

GTP binding

cytoplasm

translation

regulation of translational initiation

regulation of translational initiation

 
227163_at 0.528 5.026 3.940 1.278e-03 0.094 -0.799 GSTO2 glutathione S-transferase omega 2 10 106018620 AL162742 10q25.1 Hs.203634 27

glutathione transferase activity

cytoplasm

metabolic process

transferase activity

Glutathione metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

217830_s_at -0.574 8.316 -3.937 1.286e-03 0.095 -0.805 NSFL1C NSFL1 (p97) cofactor (p47) 20 -1370810 AL109658 20p13 Hs.12865 20

protein binding

nucleus

Golgi apparatus

Golgi stack

lipid binding

 
201729_s_at -0.438 7.560 -3.936 1.289e-03 0.095 -0.807 KIAA0100 KIAA0100 17 -23965584 NM_014680 17q11.2 Hs.151761 5

extracellular region

tricarboxylic acid cycle

malate dehydrogenase (acceptor) activity

 
226312_at -0.679 7.938 -3.935 1.292e-03 0.095 -0.809 RICTOR RPTOR independent companion of MTOR, complex 2 5 -38973779 BF940270 5p13.1 Hs.407926 21

guanyl-nucleotide exchange factor activity

protein binding

intracellular

embryonic development

positive regulation of actin filament polymerization

actin cytoskeleton reorganization

TORC2 complex

positive regulation of TOR signaling pathway

regulation of Rac GTPase activity

regulation of actin cytoskeleton organization

positive regulation of peptidyl-tyrosine phosphorylation

regulation of small GTPase mediated signal transduction

regulation of protein kinase B signaling cascade

mTOR signaling pathway

222134_at -0.734 4.988 -3.933 1.296e-03 0.095 -0.812 DDO D-aspartate oxidase 6 -110820075 AL050350 6q21 Hs.591348 11

D-amino-acid oxidase activity

binding

peroxisome

aspartate catabolic process

D-aspartate oxidase activity

oxidoreductase activity

oxidation reduction

Alanine, aspartate and glutamate metabolism

226535_at 0.648 9.547 3.933 1.297e-03 0.095 -0.813 ITGB6 integrin, beta 6 2 -160666478 AK026736 2q24.2 Hs.470399 44

receptor activity

protein binding

cell adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

integrin complex

membrane

integral to membrane

interspecies interaction between organisms

Focal adhesion

ECM-receptor interaction

Regulation of actin cytoskeleton

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

226967_at 0.506 6.463 3.932 1.298e-03 0.095 -0.813 FIZ1 FLT3-interacting zinc finger 1 19 -60794548 BG231981 19q13.42 Hs.515617 5

nucleic acid binding

receptor binding

intracellular

nucleus

cytoplasm

zinc ion binding

protein kinase binding

regulation of transcription

metal ion binding

 
201676_x_at -0.348 10.708 -3.931 1.301e-03 0.095 -0.815 PSMA1 proteasome (prosome, macropain) subunit, alpha type, 1 11 -14492087, -14482998, -14482998 NM_002786 11p15.1 Hs.102798 Hs.445711 52

RNA binding

threonine-type endopeptidase activity

protein binding

nucleus

cytoplasm

cytosol

proteasome core complex

polysome

ubiquitin-dependent protein catabolic process

peptidase activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

proteolysis involved in cellular protein catabolic process

Proteasome

204999_s_at 2.018 5.575 3.931 1.301e-03 0.095 -0.815 ATF5 activating transcription factor 5 19 55123785 BC005174 19q13.3 Hs.9754 25

transcription factor activity

RNA polymerase II transcription factor activity

transcription corepressor activity

nucleus

transcription factor complex

cytoplasm

regulation of transcription from RNA polymerase II promoter

anti-apoptosis

sequence-specific DNA binding

protein dimerization activity

 
212296_at -0.529 10.020 -3.930 1.305e-03 0.095 -0.818 PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 2 161873031 NM_005805 2q24.2 Hs.567410 15

proteasome complex

ubiquitin thiolesterase activity

protein binding

cytosol

ubiquitin-dependent protein catabolic process

peptidase activity

metallopeptidase activity

zinc ion binding

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

metal ion binding

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

protein K63-linked deubiquitination

Proteasome

226029_at 0.552 4.077 3.930 1.306e-03 0.095 -0.819 VANGL2 vang-like 2 (van gogh, Drosophila) 1 158636990 AB033041 1q22-q23 Hs.99477 8

establishment of planar polarity

neural tube closure

heart looping

multicellular organismal development

membrane

integral to membrane

sensory cilium assembly

apical protein localization

Wnt signaling pathway

202724_s_at -0.830 7.398 -3.927 1.314e-03 0.096 -0.825 FOXO1 forkhead box O1 13 -40027800 NM_002015 13q14.1 Hs.370666 140

blood vessel development

transcription factor activity

protein binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

anti-apoptosis

insulin receptor signaling pathway

transcription activator activity

regulation of cell proliferation

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

Insulin signaling pathway

Pathways in cancer

Prostate cancer

218959_at -0.608 7.426 -3.925 1.319e-03 0.096 -0.828 HOXC10 homeobox C10 12 52665212 NM_017409 12q13.3 Hs.44276 13

skeletal system development

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

positive regulation of cell proliferation

anterior/posterior pattern formation

proximal/distal pattern formation

cyclin-dependent protein kinase activating kinase holoenzyme complex

spinal cord motor neuron cell fate specification

embryonic limb morphogenesis

sequence-specific DNA binding

neuromuscular process

 
217011_at 0.505 5.787 3.924 1.322e-03 0.096 -0.830 GBX1 gastrulation brain homeobox 1 7 -150476608 L11239 7q36 Hs.647114 4

nuclear chromosome

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

sequence-specific DNA binding

 
235374_at 0.599 7.590 3.924 1.322e-03 0.096 -0.830 MDH1 malate dehydrogenase 1, NAD (soluble) 2 63669625 AW952547 2p13.3 Hs.526521 18

malic enzyme activity

binding

soluble fraction

cytoplasm

cytosol

cytosol

glycolysis

tricarboxylic acid cycle

oxaloacetate metabolic process

malate metabolic process

oxidoreductase activity

NAD metabolic process

L-malate dehydrogenase activity

L-malate dehydrogenase activity

cellular carbohydrate metabolic process

NAD or NADH binding

oxidation reduction

Citrate cycle (TCA cycle)

Pyruvate metabolism

Glyoxylate and dicarboxylate metabolism

Carbon fixation in photosynthetic organisms

Reductive carboxylate cycle (CO2 fixation)

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

218527_at -0.394 6.301 -3.924 1.322e-03 0.096 -0.830 APTX aprataxin 9 -32962607, -32962607, -32962607, -32962607, -32962607 NM_017692 9p13.3 Hs.20158 41

single strand break repair

chromatin

chromatin binding

damaged DNA binding

double-stranded DNA binding

double-stranded RNA binding

intracellular

nucleus

nucleoplasm

nucleolus

response to DNA damage stimulus

cell death

zinc ion binding

phosphoglycolate phosphatase activity

hydrolase activity

regulation of protein stability

DNA 5'-adenosine monophosphate hydrolase activity

response to hydrogen peroxide

metal ion binding

protein N-terminus binding

 
1555310_a_at 0.536 5.885 3.923 1.323e-03 0.096 -0.831 PAK6 p21 protein (Cdc42/Rac)-activated kinase 6 15 38296920, 38319326 BC035596 15q14 Hs.513645 13

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

transferase activity

ErbB signaling pathway

Axon guidance

Focal adhesion

T cell receptor signaling pathway

Regulation of actin cytoskeleton

Renal cell carcinoma

225028_at -0.677 3.030 -3.922 1.326e-03 0.096 -0.833 LOC550643 hypothetical LOC550643 X 56772442 AI417268 Xp11.1 Hs.355559 1    
227476_at -0.655 6.861 -3.920 1.331e-03 0.096 -0.836 LPGAT1 lysophosphatidylglycerol acyltransferase 1 1 -209983422 AW576195 1q32 Hs.497674 6

molecular_function

cytoplasm

endoplasmic reticulum

metabolic process

acyltransferase activity

phospholipid biosynthetic process

membrane

integral to membrane

transferase activity

 
225326_at -0.485 7.474 -3.920 1.331e-03 0.096 -0.837 RBM27 RNA binding motif protein 27 5 145563355 AB037732 5q32 Hs.61441 8

nucleotide binding

RNA binding

nucleus

cytoplasm

zinc ion binding

nuclear speck

metal ion binding

 
223104_at -0.389 7.874 -3.919 1.336e-03 0.096 -0.839 JAGN1 jagunal homolog 1 (Drosophila) 3 9907270 AF212230 3p25.2 Hs.24054 6

endoplasmic reticulum

membrane

integral to membrane

 
212337_at -0.499 6.380 -3.918 1.337e-03 0.096 -0.840 TUG1 taurine upregulated 1 (non-protein coding) 22 29695633 AI687738 22q12.2 Hs.554829 7    
207233_s_at -0.574 8.486 -3.918 1.337e-03 0.096 -0.841 MITF microphthalmia-associated transcription factor 3 69871322, 69895651, 69998131, 70010945, 70068442 NM_000248 3p14.2-p14.1 Hs.166017 Hs.618266 93

DNA binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

transcription activator activity

transcription activator activity

melanocyte differentiation

Melanogenesis

Pathways in cancer

Melanoma

1552309_a_at -0.573 12.027 -3.918 1.337e-03 0.096 -0.841 NEXN nexilin (F actin binding protein) 1 78126787 NM_144573 1p31.1 Hs.612385 6

cytoplasm

cytoskeleton

cell-substrate adherens junction

cell junction

regulation of cell migration

actin filament binding

regulation of cytoskeleton organization

 
235348_at -0.724 4.294 -3.914 1.347e-03 0.096 -0.847 ABHD13 abhydrolase domain containing 13 13 107668763 AA404347 13q33.3 Hs.183528 6

membrane

integral to membrane

hydrolase activity

 
208562_s_at -0.518 4.642 -3.914 1.350e-03 0.096 -0.849 ABCC9 ATP-binding cassette, sub-family C (CFTR/MRP), member 9 12 -21849374, -21841590 NM_020297 12p12.1 Hs.446050 35

nucleotide binding

receptor activity

transporter activity

ATP binding

transport

sulfonylurea receptor activity

ATP-sensitive potassium channel complex

potassium ion import

potassium channel regulator activity

membrane

integral to membrane

ATPase activity

ATPase activity, coupled to transmembrane movement of substances

defense response to virus

ABC transporters

212573_at -0.728 8.451 -3.911 1.356e-03 0.097 -0.854 ENDOD1 endonuclease domain containing 1 11 94462664 AF131747 11q21 Hs.167115 6

nucleic acid binding

endonuclease activity

extracellular region

hydrolase activity

metal ion binding

Apoptosis

217811_at -0.502 8.433 -3.904 1.377e-03 0.098 -0.868 SELT selenoprotein T 3 151803755 NM_016275 3q25.1 Hs.369052 9

selenocysteine incorporation

selenium binding

cell redox homeostasis

 
200769_s_at -0.811 6.068 -3.903 1.378e-03 0.098 -0.868 MAT2A methionine adenosyltransferase II, alpha 2 85619798 NM_005911 2p11.2 Hs.516157 18

nucleotide binding

magnesium ion binding

methionine adenosyltransferase activity

protein binding

ATP binding

S-adenosylmethionine biosynthetic process

one-carbon metabolic process

circadian rhythm

response to light stimulus

response to hormone stimulus

transferase activity

potassium ion binding

response to drug

cobalt ion binding

response to cAMP

Cysteine and methionine metabolism

Selenoamino acid metabolism

Biosynthesis of plant hormones

Metabolic pathways

220478_at 0.413 5.601 3.902 1.383e-03 0.098 -0.871 APOL5 apolipoprotein L, 5 22 34443864 NM_030642 22q12.3 Hs.326561 3

protein binding

extracellular region

cytoplasm

lipid metabolic process

lipid transport

high-density lipoprotein binding

lipid binding

lipoprotein metabolic process

 
205105_at -0.781 6.980 -3.899 1.391e-03 0.099 -0.877 MAN2A1 mannosidase, alpha, class 2A, member 1 5 109053054 NM_002372 5q21-q22 Hs.432822 29

Golgi membrane

in utero embryonic development

liver development

alpha-mannosidase activity

mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity

Golgi apparatus

carbohydrate metabolic process

mannose metabolic process

N-glycan processing

mitochondrion organization

vacuole organization

respiratory gaseous exchange

metabolic process

zinc ion binding

membrane

integral to membrane

hydrolase activity, hydrolyzing N-glycosyl compounds

carbohydrate binding

metal ion binding

lung alveolus development

N-Glycan biosynthesis

Metabolic pathways

225601_at -0.968 5.667 -3.898 1.394e-03 0.099 -0.879 HMGB3 high-mobility group box 3 X 149902420 AI806853 Xq28 Hs.19114 11

nucleus

chromosome

multicellular organismal development

DNA bending activity

negative regulation of B cell differentiation

negative regulation of myeloid cell differentiation

 
218013_x_at -0.932 6.579 -3.897 1.397e-03 0.099 -0.880 DCTN4 dynactin 4 (p62) 5 -150068502, -150068502 NM_016221 5q31-q32 Hs.675564 7

nucleus

cytoplasm

centrosome

cytoskeleton

protein N-terminus binding

Huntington's disease

214992_s_at -0.771 5.483 -3.897 1.397e-03 0.099 -0.881 DNASE2 deoxyribonuclease II, lysosomal 19 -12847024 AD000092 19p13.2 Hs.118243 27

DNA binding

endodeoxyribonuclease activity

deoxyribonuclease II activity

protein binding

lysosome

DNA catabolic process

apoptosis

multicellular organismal development

hydrolase activity

erythrocyte differentiation

Lysosome

205007_s_at 0.931 6.177 3.895 1.401e-03 0.099 -0.883 CIB2 calcium and integrin binding family member 2 15 -76184045 AI478592 15q24 Hs.129867 6

calcium ion binding

protein binding

 
202582_s_at -0.558 9.914 -3.894 1.404e-03 0.099 -0.885 RANBP9 RAN binding protein 9 6 -13729708 AF306510 6p23 Hs.708182 37

nucleus

cytoplasm

microtubule associated complex

protein complex assembly

microtubule nucleation

Ran GTPase binding

enzyme binding

 
201857_at -0.439 9.409 -3.893 1.407e-03 0.099 -0.887 ZFR zinc finger RNA binding protein 5 -32390212 NM_016107 5p13.3 Hs.435231 6

DNA binding

RNA binding

intracellular

nucleus

nucleolus

cytoplasm

multicellular organismal development

zinc ion binding

 
223880_x_at -0.793 10.902 -3.889 1.419e-03 0.099 -0.895 C20orf24 chromosome 20 open reading frame 24 20 34667580, 34667605 BC004446 20q11.23 Hs.584985 7

molecular_function

protein binding

cellular_component

biological_process

 
226317_at -0.800 6.772 -3.889 1.421e-03 0.099 -0.896 PPP4R2 protein phosphatase 4, regulatory subunit 2 3 73128808 AI983837 3p13 Hs.431092 7

protein binding

centrosome

mRNA processing

protein modification process

RNA splicing

 
243409_at 0.375 5.675 3.888 1.422e-03 0.099 -0.897 FOXL1 forkhead box L1 16 85169615 AI005407 16q24 Hs.533830 7

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

DNA bending activity

sequence-specific DNA binding

 
202303_x_at -0.713 5.846 -3.888 1.424e-03 0.099 -0.898 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 4 144654065 NM_003601 4q31.1-q31.2 Hs.558422 Hs.710623 37

nucleotide binding

condensed chromosome

DNA binding

RNA polymerase II transcription factor activity

helicase activity

ATP binding

nucleus

nucleoplasm

nucleolus

chromatin assembly or disassembly

nucleosome assembly

transcription initiation

regulation of transcription from RNA polymerase II promoter

embryonic development

transcription activator activity

nucleosome positioning

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

ATPase activity

RSF complex

nucleosome binding

histone binding

ATP-dependent chromatin remodeling

 
244353_s_at 0.749 6.558 3.887 1.426e-03 0.099 -0.900 SLC2A12 solute carrier family 2 (facilitated glucose transporter), member 12 6 -134350411 AI675682 6q23.2 Hs.486508 11

transporter activity

cytoplasm

carbohydrate transport

membrane

integral to membrane

substrate-specific transmembrane transporter activity

perinuclear region of cytoplasm

transmembrane transport

 
239297_at 0.462 4.095 3.885 1.431e-03 0.100 -0.903 C8orf79 chromosome 8 open reading frame 79 8 12847553, 12914143 BE932011 8p22 Hs.202521 5

metabolic process

methyltransferase activity

transferase activity

 
1553039_a_at 0.373 7.101 3.884 1.433e-03 0.100 -0.904 ASB10 ankyrin repeat and SOCS box-containing 10 7 -150503717, -150503717 NM_080871 7q36.1 Hs.647081 6

intracellular signaling cascade

modification-dependent protein catabolic process

 
218181_s_at -0.588 6.902 -3.884 1.433e-03 0.100 -0.904 MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 2 101680919 NM_017792 2q11.2-q12 Hs.719073 22

nucleotide binding

protein serine/threonine kinase activity

small GTPase regulator activity

ATP binding

cellular_component

protein amino acid phosphorylation

response to stress

protein kinase cascade

transferase activity

MAPK signaling pathway

219449_s_at -1.226 10.923 -3.884 1.434e-03 0.100 -0.905 TMEM70 transmembrane protein 70 8 75050983 NM_017866 8q21.11 Hs.106650 7

molecular_function

mitochondrion

membrane

integral to membrane

integral to mitochondrial membrane

mitochondrial proton-transporting ATP synthase complex assembly

 
227542_at -0.803 7.379 -3.883 1.437e-03 0.100 -0.907 SOCS6 suppressor of cytokine signaling 6 18 66107116 AU157543 18q22.2 Hs.44439 13

protein binding

cytoplasm

defense response

intracellular signaling cascade

JAK-STAT cascade

negative regulation of signal transduction

modification-dependent protein catabolic process

regulation of growth

 
201586_s_at -0.436 7.590 -3.882 1.440e-03 0.100 -0.908 SFPQ splicing factor proline/glutamine-rich (polypyrimidine tract binding protein associated) 1 -35421789 NM_005066 1p34.3 Hs.355934 47

nucleotide binding

DNA binding

RNA binding

protein binding

nucleus

DNA repair

DNA recombination

mRNA processing

response to DNA damage stimulus

RNA splicing

nuclear matrix

regulation of transcription

 
227696_at 0.979 8.541 3.881 1.443e-03 0.100 -0.911 EXOSC6 exosome component 6 16 -68841634 AI701408 16q22.1 Hs.660633 Hs.719211 9

3'-5'-exoribonuclease activity

exosome (RNase complex)

RNA binding

exonuclease activity

nucleus

nucleolus

cytoplasm

rRNA processing

RNA processing

hydrolase activity

RNA degradation

214030_at -0.463 7.447 -3.880 1.444e-03 0.100 -0.911 CRYBG3 beta-gamma crystallin domain containing 3 3 99078508 BE501352 3q11.2 Hs.714457 2

sugar binding

 
226968_at -0.699 10.187 -3.880 1.447e-03 0.100 -0.913 KIF1B kinesin family member 1B 1 10193350, 10193350 AK023184 1p36.2 Hs.97858 33

nucleotide binding

microtubule motor activity

protein binding

ATP binding

cytoplasm

mitochondrion

cytoskeleton

microtubule

microtubule associated complex

microtubule-based movement

nerve-nerve synaptic transmission

neuromuscular synaptic transmission

anterograde axon cargo transport

ATPase activity

kinesin binding

cytoplasmic vesicle membrane

cytoskeleton-dependent intracellular transport

cytoplasmic vesicle

 
206383_s_at -0.742 5.206 -3.879 1.449e-03 0.100 -0.915 G3BP2 GTPase activating protein (SH3 domain) binding protein 2 4 -76786976, -76786976 NM_012297 4q21.1 Hs.303676 15

nucleotide binding

RNA binding

protein binding

intracellular

cytoplasm

transport

cytoplasmic sequestering of NF-kappaB

Ras protein signal transduction

receptor signaling complex scaffold activity

mRNA transport

 
231358_at 0.543 5.244 3.878 1.451e-03 0.100 -0.915 MRO maestro 18 -46575487, -46575487 BE465760 18q21 Hs.30495 6

binding

nucleus

nucleolus

 
218694_at -0.780 8.432 -3.877 1.454e-03 0.100 -0.918 ARMCX1 armadillo repeat containing, X-linked 1 X 100692169 NM_016608 Xq21.33-q22.2 Hs.9728 8

binding

membrane

integral to membrane

 
206342_x_at -0.663 6.047 -3.876 1.456e-03 0.100 -0.919 IDS iduronate 2-sulfatase X -148376566, -148368202 NM_006123 Xq28 Hs.460960 73

iduronate-2-sulfatase activity

calcium ion binding

lysosome

metabolic process

hydrolase activity

glycosaminoglycan metabolic process

Glycosaminoglycan degradation

Metabolic pathways

Lysosome

216779_at 0.314 3.685 3.874 1.465e-03 0.100 -0.924 CYLC1 cylicin, basic protein of sperm head cytoskeleton 1 X 83002825 Z22780 Xq21.1 Hs.444230 6

structural molecule activity

cytoplasm

cytoskeleton

multicellular organismal development

spermatogenesis

cell differentiation

cytoskeletal calyx

acrosomal matrix

 
214846_s_at -0.994 7.757 -3.870 1.475e-03 0.101 -0.931 ALPK3 alpha-kinase 3 15 83160914 AB037751 15q25.2 Hs.459183 5

protein serine/threonine kinase activity

ATP binding

nucleus

protein amino acid phosphorylation

multicellular organismal development

heart development

kinase activity

transferase activity

 
213380_x_at 0.475 5.443 3.870 1.477e-03 0.101 -0.932 MSTP9 macrophage stimulating, pseudogene 9 1 -16953988 AA911235 1p36.13 Hs.349110 Hs.655432 2

serine-type endopeptidase activity

extracellular region

proteolysis

peptidase activity

 
1563842_at 0.330 4.922 3.867 1.485e-03 0.101 -0.937 PIGG phosphatidylinositol glycan anchor biosynthesis, class G 4 482988 AK097244 4p16.3 Hs.7099 8

protein binding

endoplasmic reticulum

endoplasmic reticulum membrane

metabolic process

membrane

integral to membrane

preassembly of GPI anchor in ER membrane

transferase activity

phosphotransferase activity, for other substituted phosphate groups

CP2 mannose-ethanolamine phosphotransferase activity

Glycosylphosphatidylinositol(GPI)-anchor biosynthesis

227091_at 0.463 4.776 3.865 1.491e-03 0.101 -0.941 CCDC146 coiled-coil domain containing 146 7 76589869 AB040938 7q11.23 Hs.113940 4    
235595_at 0.492 6.625 3.864 1.496e-03 0.101 -0.943 ARHGEF2 Rho/Rac guanine nucleotide exchange factor (GEF) 2 1 -154183253, -154183253 AW299534 1q21-q22 Hs.655209 28

cell morphogenesis

guanyl-nucleotide exchange factor activity

intracellular

cytoplasm

Golgi apparatus

spindle

microtubule

tight junction

intracellular protein transport

actin filament organization

negative regulation of microtubule depolymerization

cell cycle

mitosis

intracellular signaling cascade

microtubule binding

zinc ion binding

diacylglycerol binding

cell junction

Rac guanyl-nucleotide exchange factor activity

regulation of Rho protein signal transduction

regulation of cell proliferation

metal ion binding

Rac GTPase binding

cell division

Pathogenic Escherichia coli infection - EHEC

225363_at -0.388 8.593 -3.863 1.496e-03 0.101 -0.944 PTEN phosphatase and tensin homolog 10 89613174 AK024986 10q23.3 Hs.500466 557

regulation of cyclin-dependent protein kinase activity

magnesium ion binding

angiogenesis

phosphatidylinositol-3-phosphatase activity

protein serine/threonine phosphatase activity

protein tyrosine phosphatase activity

platelet-derived growth factor receptor binding

protein binding

nucleus

cytoplasm

cytoplasm

cytosol

protein amino acid dephosphorylation

protein amino acid dephosphorylation

lipid metabolic process

induction of apoptosis

central nervous system development

protein tyrosine/serine/threonine phosphatase activity

negative regulation of cell proliferation

lipid binding

phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity

phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity

hydrolase activity

PDZ domain binding

negative regulation of cell migration

neuron projection development

regulation of protein stability

negative regulation of apoptosis

endothelial cell migration

inositol phosphate dephosphorylation

phosphoinositide dephosphorylation

platelet-derived growth factor receptor signaling pathway

cardiac muscle tissue development

inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity

phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity

negative regulation of focal adhesion formation

negative regulation of protein kinase B signaling cascade

Inositol phosphate metabolism

Phosphatidylinositol signaling system

p53 signaling pathway

Focal adhesion

Tight junction

Pathways in cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Small cell lung cancer

205499_at -0.559 4.423 -3.859 1.510e-03 0.102 -0.952 SRPX2 sushi-repeat-containing protein, X-linked 2 X 99785818 NM_014467 Xq21.33-q23 Hs.306339 13

extracellular region

 
212468_at -0.821 6.974 -3.858 1.512e-03 0.102 -0.953 SPAG9 sperm associated antigen 9 17 -46394534 AK023512 17q21.33 Hs.463439 22

acrosomal vesicle

protein binding

cytoplasm

spermatogenesis

integral to membrane

positive regulation of cell migration

perinuclear region of cytoplasm

 
234947_s_at -0.698 7.166 -3.858 1.514e-03 0.102 -0.955 C10orf84 chromosome 10 open reading frame 84 10 -120058561 AK026630 10q26.11 Hs.372309 5    
225032_at -0.709 8.203 -3.857 1.516e-03 0.102 -0.956 FNDC3B fibronectin type III domain containing 3B 3 173240111, 173241037 AI141784 3q26.31 Hs.159430 9

endoplasmic reticulum

membrane

integral to membrane

 
210072_at 0.394 3.942 3.857 1.517e-03 0.102 -0.956 CCL19 chemokine (C-C motif) ligand 19 9 -34679566 U88321 9p13 Hs.50002 39

extracellular region

extracellular space

cellular calcium ion homeostasis

chemotaxis

inflammatory response

immune response

signal transduction

chemokine activity

response to virus

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

212590_at -0.848 7.834 -3.856 1.519e-03 0.102 -0.958 RRAS2 related RAS viral (r-ras) oncogene homolog 2 11 -14256041, -14256041 AI431643 11p15.2 Hs.502004 25

nucleotide binding

GTPase activity

protein binding

GTP binding

intracellular

endoplasmic reticulum

plasma membrane

Ras protein signal transduction

cellular process

positive regulation of cell migration

MAPK signaling pathway

Tight junction

Regulation of actin cytoskeleton

221667_s_at -0.839 11.262 -3.855 1.523e-03 0.102 -0.960 HSPB8 heat shock 22kDa protein 8 12 118100977 AF133207 12q24.23 Hs.400095 48

protein serine/threonine kinase activity

cellular_component

intracellular

biological_process

cell death

response to heat

identical protein binding

 
1555259_at -0.755 5.978 -3.854 1.526e-03 0.102 -0.962 ZAK sterile alpha motif and leucine zipper containing kinase AZK 2 173648810, 173648810 AF465843 2q24.2 Hs.444451 24

cell cycle checkpoint

DNA damage checkpoint

nucleotide binding

activation of MAPKK activity

magnesium ion binding

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

protein tyrosine kinase activity

ATP binding

nucleus

cytoplasm

response to stress

cell cycle

cell cycle arrest

protein kinase cascade

activation of JUN kinase activity

cell death

cell proliferation

response to radiation

transferase activity

cell differentiation

identical protein binding

positive regulation of apoptosis

MAPK signaling pathway

Tight junction

202077_at 0.453 12.059 3.852 1.531e-03 0.102 -0.965 NDUFAB1 NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa 16 -23499835 NM_005003 16p12.2 Hs.189716 14

acyl carrier activity

fatty acid binding

calcium ion binding

mitochondrion

mitochondrial respiratory chain complex I

mitochondrial respiratory chain complex I

mitochondrial matrix

mitochondrial electron transport, NADH to ubiquinone

fatty acid biosynthetic process

transport

NADH dehydrogenase (ubiquinone) activity

electron transport chain

phosphopantetheine binding

mitochondrial membrane

mitochondrial membrane

cofactor binding

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

201936_s_at -1.123 7.459 -3.852 1.531e-03 0.102 -0.965 EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 1 -21005560 NM_003760 1p36.12 Hs.467084 19

RNA cap binding

translation initiation factor activity

protein binding

regulation of translational initiation

RNA metabolic process

eukaryotic translation initiation factor 4F complex

interspecies interaction between organisms

 
40255_at -0.430 6.337 -3.851 1.535e-03 0.102 -0.967 DDX28 DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 16 -66612674 AC004531 16q22.1 Hs.458313 9

nucleotide binding

RNA binding

helicase activity

ATP binding

nucleus

mitochondrion

ATP-dependent helicase activity

hydrolase activity

mitochondrial nucleoid

 
232913_at 0.387 5.067 3.848 1.544e-03 0.102 -0.973 TMED8 transmembrane emp24 protein transport domain containing 8 14 -76877866 AC007954 14q24.3 Hs.200413 Hs.26403 6    
209025_s_at -0.728 7.549 -3.848 1.544e-03 0.102 -0.973 SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 6 -86380411, -86380411, -86374221, -86374221, -86374221, -86374221 AF037448 6q14-q15 Hs.571177 33

nucleotide binding

RNA binding

protein binding

nucleus

nucleoplasm

spliceosomal complex

cytoplasm

endoplasmic reticulum

microsome

mRNA processing

poly(A) RNA binding

RNA splicing

interspecies interaction between organisms

 
202211_at -0.577 6.940 -3.847 1.547e-03 0.102 -0.974 ARFGAP3 ADP-ribosylation factor GTPase activating protein 3 22 -41522475 BC005122 22q13.2-q13.3 Hs.162877 15

cytoplasm

Golgi apparatus

cytosol

intracellular protein transport

ARF GTPase activator activity

zinc ion binding

protein transporter activity

protein secretion

membrane

vesicle-mediated transport

regulation of ARF GTPase activity

metal ion binding

Endocytosis

205621_at -0.465 6.865 -3.846 1.551e-03 0.103 -0.977 ALKBH1 alkB, alkylation repair homolog 1 (E. coli) 14 -77208501 NM_006020 14q24.3 Hs.94542 6

DNA dealkylation

 
223046_at -0.695 10.533 -3.845 1.554e-03 0.103 -0.979 EGLN1 egl nine homolog 1 (C. elegans) 1 -229566120 AL117352 1q42.1 Hs.444450 Hs.710300 42

response to hypoxia

embryonic placenta development

iron ion binding

protein binding

cytosol

heart development

zinc ion binding

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

L-ascorbic acid binding

peptidyl-proline dioxygenase activity

oxygen homeostasis

negative regulation of transcription factor activity

metal ion binding

oxidation reduction

Pathways in cancer

Renal cell carcinoma

210257_x_at -0.584 4.790 -3.840 1.571e-03 0.103 -0.988 CUL4B cullin 4B X -119542473, -119542473 AF212995 Xq23 Hs.102914 28

molecular_function

protein binding

cellular_component

DNA repair

ubiquitin-dependent protein catabolic process

response to DNA damage stimulus

cell cycle

cullin-RING ubiquitin ligase complex

ubiquitin protein ligase binding

Nucleotide excision repair

Ubiquitin mediated proteolysis

202370_s_at -0.643 7.815 -3.838 1.575e-03 0.103 -0.991 CBFB core-binding factor, beta subunit 16 65620550 NM_001755 16q22.1 Hs.460988 39

osteoblast differentiation

transcription factor activity

RNA polymerase II transcription factor activity

transcription coactivator activity

protein binding

nucleus

lymphocyte differentiation

myeloid cell differentiation

positive regulation of transcription from RNA polymerase II promoter

cell maturation

definitive hemopoiesis

 
209027_s_at -0.719 5.959 -3.838 1.576e-03 0.103 -0.991 ABI1 abl-interactor 1 10 -27075530 BF673013 10p11.2 Hs.508148 39

intracellular

soluble fraction

nucleus

cytoplasm

endoplasmic reticulum

cytosol

cytoskeleton

transmembrane receptor protein tyrosine kinase signaling pathway

cytoskeletal protein binding

negative regulation of cell proliferation

peptidyl-tyrosine phosphorylation

synaptosome

lamellipodium

cell junction

filopodium

growth cone

synapse

 
225525_at -1.547 7.458 -3.838 1.576e-03 0.103 -0.992 KIAA1671 KIAA1671 22 23753940 AB051458 22q11.23 Hs.419171 4    
203264_s_at 0.591 5.026 3.838 1.577e-03 0.103 -0.992 ARHGEF9 Cdc42 guanine nucleotide exchange factor (GEF) 9 X -62771572 NM_015185 Xq11.1 Hs.54697 10

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

intracellular

cytoplasm

regulation of Rho protein signal transduction

 
235103_at -0.956 6.297 -3.835 1.586e-03 0.104 -0.997 MAN2A1 mannosidase, alpha, class 2A, member 1 5 109053054 AA029155 5q21-q22 Hs.432822 29

Golgi membrane

in utero embryonic development

liver development

alpha-mannosidase activity

mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity

Golgi apparatus

carbohydrate metabolic process

mannose metabolic process

N-glycan processing

mitochondrion organization

vacuole organization

respiratory gaseous exchange

metabolic process

zinc ion binding

membrane

integral to membrane

hydrolase activity, hydrolyzing N-glycosyl compounds

carbohydrate binding

metal ion binding

lung alveolus development

N-Glycan biosynthesis

Metabolic pathways

210407_at -0.852 5.498 -3.834 1.588e-03 0.104 -0.999 PPM1A protein phosphatase 1A (formerly 2C), magnesium-dependent, alpha isoform 14 59782222, 59785718, 59785718 AF070670 14q23.1 Hs.130036 28

magnesium ion binding

protein serine/threonine phosphatase activity

signal transducer activity

cellular_component

membrane fraction

voltage-gated calcium channel complex

protein amino acid dephosphorylation

protein C-terminus binding

protein serine/threonine phosphatase complex

hydrolase activity

manganese ion binding

positive regulation of Wnt receptor signaling pathway

neuron projection

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of transcription, DNA-dependent

MAPK signaling pathway

220949_s_at -0.562 7.049 -3.834 1.589e-03 0.104 -0.999 C7orf49 chromosome 7 open reading frame 49 7 -134501071 NM_024033 7q33 Hs.521213 4

cytoplasm

 
222668_at -1.123 4.264 -3.834 1.590e-03 0.104 -1.000 KCTD15 potassium channel tetramerisation domain containing 15 19 38979590 W73820 19q13.11 Hs.221873 Hs.606506 12

voltage-gated potassium channel activity

protein binding

potassium ion transport

voltage-gated potassium channel complex

membrane

 
212585_at -0.789 7.101 -3.832 1.596e-03 0.104 -1.003 OSBPL8 oxysterol binding protein-like 8 12 -75269708 BF970829 12q14 Hs.430849 13

lipid transport

steroid metabolic process

 
207643_s_at -0.512 6.990 -3.831 1.600e-03 0.104 -1.006 TNFRSF1A tumor necrosis factor receptor superfamily, member 1A 12 -6308183 NM_001065 12p13.2 Hs.279594 Hs.713833 271

receptor activity

tumor necrosis factor receptor activity

protein binding

extracellular region

plasma membrane

plasma membrane

integral to plasma membrane

prostaglandin metabolic process

apoptosis

signal transduction

cytokine-mediated signaling pathway

positive regulation of I-kappaB kinase/NF-kappaB cascade

interspecies interaction between organisms

membrane raft

positive regulation of transcription from RNA polymerase II promoter

positive regulation of inflammatory response

MAPK signaling pathway

Cytokine-cytokine receptor interaction

Apoptosis

Adipocytokine signaling pathway

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

217878_s_at -0.971 7.117 -3.829 1.606e-03 0.104 -1.009 CDC27 cell division cycle 27 homolog (S. cerevisiae) 17 -42550309 AI203880 17q12-q23.2 Hs.463295 53

protein binding

nucleus

nucleoplasm

cytoplasm

centrosome

cytosol

spindle microtubule

mitotic metaphase/anaphase transition

cell proliferation

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

217403_s_at -0.469 3.202 -3.828 1.608e-03 0.104 -1.010 ZNF227 zinc finger protein 227 19 49408530 AC074331   Hs.371335 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
230708_at 0.439 4.821 3.827 1.612e-03 0.104 -1.013 PRICKLE1 prickle homolog 1 (Drosophila) 12 -41138407, -41138407, -41138407 AA206141 12q12 Hs.524348 Hs.639400 14

nucleus

cytoplasm

cytosol

zinc ion binding

membrane

nuclear membrane

metal ion binding

Wnt signaling pathway

202009_at -0.472 8.592 -3.825 1.620e-03 0.105 -1.017 TWF2 twinfilin, actin-binding protein, homolog 2 (Drosophila) 3 -52237665 NM_007284 3p21.1 Hs.436439 9

actin binding

protein binding

ATP binding

intracellular

cytoplasm

cytoskeleton

perinuclear region of cytoplasm

 
221889_at 0.450 4.909 3.825 1.620e-03 0.105 -1.017 KCTD13 potassium channel tetramerisation domain containing 13 16 -29825161 AW026481 16p11.2 Hs.534590 9

voltage-gated potassium channel activity

nucleus

DNA replication

potassium ion transport

voltage-gated potassium channel complex

membrane

identical protein binding

 
203411_s_at -0.419 7.886 -3.824 1.621e-03 0.105 -1.017 LMNA lamin A/C 1 154351084, 154351084 NM_005572 1q21.2-q21.3 Hs.594444 279

structural molecule activity

protein binding

nucleus

cytoplasm

intermediate filament

plasma membrane

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

212271_at -0.551 7.929 -3.823 1.624e-03 0.105 -1.019 MAPK1 mitogen-activated protein kinase 1 22 -20453318, -20443946 AA195999 22q11.2 22q11.21 Hs.431850 822

MAPKKK cascade

nucleotide binding

phosphotyrosine binding

protein serine/threonine kinase activity

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

nucleoplasm

nucleolus

cytoplasm

cytosol

cytosol

cytoskeleton

protein amino acid phosphorylation

induction of apoptosis

chemotaxis

response to DNA damage stimulus

cell cycle

Ras protein signal transduction

synaptic transmission

organ morphogenesis

transferase activity

MAP kinase 2 activity

cytosine metabolic process

lipopolysaccharide-mediated signaling pathway

response to lipopolysaccharide

response to exogenous dsRNA

interspecies interaction between organisms

negative regulation of cell differentiation

T cell receptor signaling pathway

B cell receptor signaling pathway

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

mTOR signaling pathway

Vascular smooth muscle contraction

Dorso-ventral axis formation

TGF-beta signaling pathway

Axon guidance

VEGF signaling pathway

Focal adhesion

Adherens junction

Gap junction

Toll-like receptor signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Long-term potentiation

Neurotrophin signaling pathway

Long-term depression

Regulation of actin cytoskeleton

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Type II diabetes mellitus

Alzheimer's disease

Prion diseases

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Thyroid cancer

Melanoma

Bladder cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Non-small cell lung cancer

212328_at -0.623 9.315 -3.822 1.630e-03 0.105 -1.023 LIMCH1 LIM and calponin homology domains 1 4 41057560, 41309675 AB029025 4p13 Hs.335163 10

actin binding

zinc ion binding

actomyosin structure organization

metal ion binding

 
221821_s_at -0.985 7.843 -3.821 1.632e-03 0.105 -1.023 C12orf41 chromosome 12 open reading frame 41 12 -47333261 AK022732 12q13.11 Hs.505412 8    
226137_at -0.711 7.435 -3.821 1.632e-03 0.105 -1.024 ZFHX3 zinc finger homeobox 3 16 -71374286 AI288759 16q22.3-q23.1 Hs.598297 26

negative regulation of transcription from RNA polymerase II promoter

RNA polymerase II transcription factor activity, enhancer binding

intracellular

nucleus

transcription factor complex

mitochondrion

regulation of transcription, DNA-dependent

zinc ion binding

transcription repressor activity

sequence-specific DNA binding

metal ion binding

 
205841_at -1.034 5.502 -3.820 1.636e-03 0.105 -1.026 JAK2 Janus kinase 2 9 4975244 NM_004972 9p24 Hs.656213 588

nucleotide binding

non-membrane spanning protein tyrosine kinase activity

Janus kinase activity

receptor binding

growth hormone receptor binding

interleukin-12 receptor binding

ATP binding

nucleus

cytoplasm

cytoskeleton

caveola

apoptosis

cell motion

enzyme linked receptor protein signaling pathway

tyrosine phosphorylation of STAT protein

STAT protein nuclear translocation

mesoderm development

negative regulation of cell proliferation

positive regulation of phosphoinositide 3-kinase cascade

membrane

transferase activity

myeloid cell differentiation

SH2 domain binding

positive regulation of tyrosine phosphorylation of Stat3 protein

positive regulation of tyrosine phosphorylation of Stat5 protein

negative regulation of DNA binding

response to antibiotic

positive regulation of peptidyl-tyrosine phosphorylation

JAK-STAT cascade involved in growth hormone signaling pathway

positive regulation of growth hormone receptor signaling pathway

Chemokine signaling pathway

Jak-STAT signaling pathway

Adipocytokine signaling pathway

220757_s_at -0.570 6.926 -3.817 1.645e-03 0.105 -1.031 UBXN6 UBX domain protein 6 19 -4396260 NM_025241 19p13 Hs.435255 Hs.661664 6

molecular_function

protein binding

cellular_component

nucleus

cytoplasm

centrosome

biological_process

modification-dependent protein catabolic process

 
200684_s_at -0.687 6.645 -3.817 1.647e-03 0.105 -1.032 UBE2L3 ubiquitin-conjugating enzyme E2L 3 22 20251956 AI819709 22q11.21 Hs.108104 Hs.603229 Hs.715088 38

ubiquitin ligase complex

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

cytoplasm

ubiquitin-dependent protein catabolic process

protein ubiquitination

ligase activity

enzyme binding

regulation of protein metabolic process

Ubiquitin mediated proteolysis

Parkinson's disease

226567_at -0.648 8.468 -3.816 1.649e-03 0.105 -1.033 USP14 ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) 18 148482 BG283995 18p11.32 Hs.464416 Hs.707058 15

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

cytoplasm

ubiquitin-dependent protein catabolic process

tRNA guanylyltransferase activity

peptidase activity

 
223886_s_at -0.406 9.888 -3.815 1.652e-03 0.105 -1.035 RNF146 ring finger protein 146 6 127629712 AL136829 6q22.1-q22.33 Hs.267120 12

protein binding

zinc ion binding

metal ion binding

 
237094_at -0.545 2.970 -3.815 1.652e-03 0.105 -1.035 FAM19A5 family with sequence similarity 19 (chemokine (C-C motif)-like), member A5 22 47263951, 47350781 AI953086 22q13.32 Hs.436854 Hs.632788 8

extracellular region

membrane

integral to membrane

 
220565_at 0.804 4.568 3.815 1.654e-03 0.105 -1.036 CCR10 chemokine (C-C motif) receptor 10 17 -38084945 NM_016602 17q21.1-q21.3 Hs.719562 20

receptor activity

G-protein coupled receptor activity

protein binding

plasma membrane

integral to plasma membrane

chemotaxis

signal transduction

G-protein coupled receptor protein signaling pathway

elevation of cytosolic calcium ion concentration

C-C chemokine receptor activity

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

231935_at -1.033 7.696 -3.814 1.658e-03 0.105 -1.038 ARPP-21 cyclic AMP-regulated phosphoprotein, 21 kD 3 35658852, 35696119, 35697432 AL133109 3p22.3 Hs.475902 Hs.713605 7

molecular_function

nucleic acid binding

cellular_component

cytoplasm

biological_process

 
225131_at -0.803 7.856 -3.813 1.661e-03 0.105 -1.040 ZRANB1 zinc finger, RAN-binding domain containing 1 10 126620681 H60265 10q26.13 Hs.595158 3

ubiquitin-protein ligase activity

protein binding

intracellular

nucleus

cytoplasm

peptidase activity

cysteine-type peptidase activity

zinc ion binding

modification-dependent protein catabolic process

positive regulation of Wnt receptor signaling pathway

metal ion binding

 
201243_s_at -0.629 11.157 -3.811 1.667e-03 0.105 -1.043 ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 1 167342570 NM_001677 1q24 Hs.291196 34

response to hypoxia

sodium:potassium-exchanging ATPase activity

protein binding

plasma membrane

sodium:potassium-exchanging ATPase complex

ATP biosynthetic process

ion transport

potassium ion transport

sodium ion transport

integral to membrane

basolateral plasma membrane

potassium ion binding

sodium ion binding

Cardiac muscle contraction

213859_x_at -0.564 3.540 -3.809 1.672e-03 0.105 -1.046 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 4 144654065 AI652586 4q31.1-q31.2 Hs.558422 Hs.710623 37

nucleotide binding

condensed chromosome

DNA binding

RNA polymerase II transcription factor activity

helicase activity

ATP binding

nucleus

nucleoplasm

nucleolus

chromatin assembly or disassembly

nucleosome assembly

transcription initiation

regulation of transcription from RNA polymerase II promoter

embryonic development

transcription activator activity

nucleosome positioning

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

ATPase activity

RSF complex

nucleosome binding

histone binding

ATP-dependent chromatin remodeling

 
222568_at -0.454 6.088 -3.809 1.673e-03 0.105 -1.047 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 128565223, 128565251 AI672492 2q14.3 Hs.598715 Hs.719174 10

UDP-glucose:glycoprotein glucosyltransferase activity

endoplasmic reticulum

endoplasmic reticulum lumen

ER-Golgi intermediate compartment

protein amino acid glycosylation

transferase activity, transferring glycosyl groups

unfolded protein binding

'de novo' posttranslational protein folding

 
211537_x_at -0.664 5.912 -3.805 1.686e-03 0.106 -1.053 MAP3K7 mitogen-activated protein kinase kinase kinase 7 6 -91282073, -91282073 AF218074 6q16.1-q16.3 Hs.719192 114

nucleotide binding

magnesium ion binding

positive regulation of T cell cytokine production

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

cytosol

protein amino acid phosphorylation

signal transduction

transforming growth factor beta receptor signaling pathway

activation of NF-kappaB-inducing kinase activity

transferase activity

positive regulation of interleukin-2 production

T cell receptor signaling pathway

positive regulation of T cell activation

MAPK signaling pathway

Wnt signaling pathway

Adherens junction

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

T cell receptor signaling pathway

207327_at -0.477 5.525 -3.805 1.687e-03 0.106 -1.054 EYA4 eyes absent homolog 4 (Drosophila) 6 133604187 NM_004100 6q23 Hs.596680 15

magnesium ion binding

protein tyrosine phosphatase activity

nucleus

cytoplasm

DNA repair

response to DNA damage stimulus

multicellular organismal development

visual perception

metabolic process

anatomical structure morphogenesis

chromatin modification

hydrolase activity

regulation of transcription

 
36554_at -0.693 5.830 -3.804 1.691e-03 0.106 -1.056 ASMTL acetylserotonin O-methyltransferase-like X, Y -1482031, -1482031 Y15521 Xp22.3 Yp11.3 Hs.533514 10

cellular_component

cytoplasm

acetylserotonin O-methyltransferase activity

melatonin biosynthetic process

 
209860_s_at -0.696 9.710 -3.802 1.697e-03 0.106 -1.059 ANXA7 annexin A7 10 -74805194 J04543 10q21.1-q21.2 Hs.631827 24

calcium ion binding

calcium-dependent phospholipid binding

calcium-dependent protein binding

 
230249_at -1.443 5.937 -3.802 1.698e-03 0.106 -1.060 KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3 8 136538897 AI650382 8q24.2 Hs.444558 20

RNA binding

protein binding

nucleus

nucleolus

cytoplasm

spermatogenesis

SH3 domain binding

regulation of transcription

 
1553102_a_at -0.721 8.649 -3.802 1.698e-03 0.106 -1.060 CCDC69 coiled-coil domain containing 69 5 -150540805 BC016647 5q33.1 Hs.655336 3    
1552734_at -0.382 3.951 -3.801 1.699e-03 0.106 -1.061 RICTOR RPTOR independent companion of MTOR, complex 2 5 -38973779 NM_152756 5p13.1 Hs.407926 21

guanyl-nucleotide exchange factor activity

protein binding

intracellular

embryonic development

positive regulation of actin filament polymerization

actin cytoskeleton reorganization

TORC2 complex

positive regulation of TOR signaling pathway

regulation of Rac GTPase activity

regulation of actin cytoskeleton organization

positive regulation of peptidyl-tyrosine phosphorylation

regulation of small GTPase mediated signal transduction

regulation of protein kinase B signaling cascade

mTOR signaling pathway

224636_at -0.664 8.964 -3.801 1.700e-03 0.106 -1.061 ZFP91 zinc finger protein 91 homolog (mouse) 11 58103162 AL045405 11q12 Hs.524920 10

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
224476_s_at 0.574 7.217 3.801 1.702e-03 0.106 -1.062 MESP1 mesoderm posterior 1 homolog (mouse) 15 -88094103 BC006219 15q26.1 Hs.447531 4

heart morphogenesis

DNA binding

nucleus

Notch signaling pathway

multicellular organismal development

mesodermal cell migration

transcription regulator activity

regulation of transcription

 
208643_s_at -0.536 8.176 -3.798 1.713e-03 0.106 -1.068 XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 2 216682264 J04977 2q35 Hs.388739 148

nucleotide binding

telomere maintenance

nuclear telomere cap complex

DNA binding

double-stranded telomeric DNA binding

ATP-dependent DNA helicase activity

helicase activity

ATP binding

nucleus

nucleoplasm

chromosome

double-strand break repair via nonhomologous end joining

response to DNA damage stimulus

protein C-terminus binding

promoter binding

hydrolase activity

provirus integration

initiation of viral infection

Non-homologous end-joining

1558762_a_at 0.418 5.053 3.797 1.716e-03 0.106 -1.069 ZNF789 zinc finger protein 789 7 98908450, 98908450 AK093141 7q22.1 Hs.440384 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
211597_s_at 0.671 7.451 3.794 1.726e-03 0.107 -1.075 HOPX HOP homeobox 4 -57208910, -57208910 AB059408 4q11-q12 Hs.654864 25

negative regulation of transcription from RNA polymerase II promoter

trophectodermal cell differentiation

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

heart development

regulation of heart contraction

transcription repressor activity

histone deacetylation

positive regulation of skeletal muscle regeneration

sequence-specific DNA binding

negative regulation of cell differentiation

lung alveolus development

positive regulation of striated muscle cell differentiation

 
55662_at -0.599 6.188 -3.793 1.729e-03 0.107 -1.077 C10orf76 chromosome 10 open reading frame 76 10 -103595345 H27225 10q24.32 Hs.16004 4

membrane

integral to membrane

 
208985_s_at -0.839 9.651 -3.793 1.730e-03 0.107 -1.077 EIF3J eukaryotic translation initiation factor 3, subunit J 15 42616557 BC002719 15q21.1 Hs.404056 19

translation initiation factor activity

protein binding

cytoplasm

cytosol

eukaryotic translation initiation factor 3 complex

translational initiation

 
211968_s_at -0.774 9.335 -3.793 1.730e-03 0.107 -1.077 HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 14 -101616827, -101616827 AI962933 14q32.33 Hs.525600 Hs.700831 275

nucleotide binding

ATP binding

cytoplasm

cytosol

cytosol

mitochondrial transport

response to unfolded protein

signal transduction

nitric-oxide synthase regulator activity

TPR domain binding

TPR domain binding

cellular chaperone-mediated protein complex assembly

protein refolding

melanosome

protein homodimerization activity

positive regulation of nitric oxide biosynthetic process

unfolded protein binding

mitochondrial outer membrane translocase complex assembly

Antigen processing and presentation

Pathways in cancer

Prostate cancer

216251_s_at -0.388 6.200 -3.792 1.733e-03 0.107 -1.079 TTLL12 tubulin tyrosine ligase-like family, member 12 22 -41892571 BF965437 22q13.31 Hs.517670 6

tubulin-tyrosine ligase activity

protein modification process

 
226548_at 0.527 7.623 3.791 1.736e-03 0.107 -1.081 SBK1 SH3-binding domain kinase 1 16 28211340 AI935915 16p11.2 Hs.97837 3

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

transferase activity

 
224961_at -0.488 6.565 -3.789 1.743e-03 0.107 -1.084 SCYL2 SCY1-like 2 (S. cerevisiae) 12 99185679 AB037781 12q23.1 Hs.506481 8

protein kinase activity

binding

ATP binding

cytoplasm

endosome

Golgi apparatus

protein amino acid phosphorylation

endosome membrane

membrane

clathrin-coated vesicle

cytoplasmic vesicle

perinuclear region of cytoplasm

 
218869_at 1.022 8.408 3.789 1.744e-03 0.107 -1.084 MLYCD malonyl-CoA decarboxylase 16 82490230 NM_012213 16q24 Hs.644610 16

methylmalonyl-CoA decarboxylase activity

cytoplasm

mitochondrion

peroxisome

cytosol

acetyl-CoA biosynthetic process

fatty acid biosynthetic process

acyl-CoA metabolic process

lyase activity

regulation of fatty acid beta-oxidation

malonyl-CoA decarboxylase activity

beta-Alanine metabolism

Propanoate metabolism

Metabolic pathways

200882_s_at -0.516 9.443 -3.786 1.754e-03 0.107 -1.090 PSMD4 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 1 149493820 NM_002810 1q21.3 Hs.505059 62

proteasome complex

protein binding

cytosol

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

212036_s_at -0.613 7.762 -3.783 1.763e-03 0.108 -1.095 PNN pinin, desmosome associated protein 14 38714137 AW152664 14q21.1 Hs.409965 30

DNA binding

structural molecule activity

protein binding

nucleus

spliceosomal complex

nucleolus

cytoplasm

intermediate filament

plasma membrane

mRNA processing

cell adhesion

RNA splicing

nuclear speck

desmosome

regulation of transcription

 
219887_at 0.319 4.457 3.782 1.767e-03 0.108 -1.097 CCDC87 coiled-coil domain containing 87 11 -66114215 NM_018219 11q13.2 Hs.121072 3    
226736_at -2.502 7.588 -3.781 1.772e-03 0.108 -1.099 CHURC1 churchill domain containing 1 14 64450892 BE568660 14q23.3 Hs.325531 5

multicellular organismal development

zinc ion binding

transcription activator activity

positive regulation of transcription

metal ion binding

 
212582_at -0.990 7.202 -3.780 1.777e-03 0.108 -1.102 OSBPL8 oxysterol binding protein-like 8 12 -75269708 AL049923 12q14 Hs.430849 13

lipid transport

steroid metabolic process

 
212717_at -0.433 6.963 -3.774 1.798e-03 0.110 -1.113 PLEKHM1 pleckstrin homology domain containing, family M (with RUN domain) member 1 17 -40869048 AB002354 17q21.31 Hs.514242 7

cytoplasm

intracellular signaling cascade

zinc ion binding

diacylglycerol binding

metal ion binding

 
201174_s_at -0.413 8.264 -3.773 1.800e-03 0.110 -1.114 TERF2IP telomeric repeat binding factor 2, interacting protein 16 74239184 NM_018975 16q23.1 Hs.301419 25

nuclear chromosome

nuclear telomere cap complex

DNA binding

protein binding

nucleus

nucleoplasm

cytoplasm

telomere maintenance via telomerase

Mre11 complex

protection from non-homologous end joining at telomere

negative regulation of telomere maintenance

telomeric DNA binding

regulation of transcription

protein localization to telomere

 
233632_s_at -0.892 7.190 -3.773 1.801e-03 0.110 -1.114 XRN1 5'-3' exoribonuclease 1 3 -143508138 AL117516 3q23 Hs.435103 12

DNA binding

RNA binding

protein binding

intracellular

cytoplasm

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

5'-3' exonuclease activity

hydrolase activity

RNA degradation

201856_s_at -0.797 5.459 -3.773 1.803e-03 0.110 -1.115 ZFR zinc finger RNA binding protein 5 -32390212 BC000376 5p13.3 Hs.435231 6

DNA binding

RNA binding

intracellular

nucleus

nucleolus

cytoplasm

multicellular organismal development

zinc ion binding

 
215286_s_at -0.529 4.704 -3.772 1.807e-03 0.110 -1.117 PHTF2 putative homeodomain transcription factor 2 7 77266044, 77266044, 77307382, 77307382 AL050389 7q11.23-q21 Hs.203965 Hs.601884 11

DNA binding

nucleus

endoplasmic reticulum

regulation of transcription

 
212765_at -0.546 7.042 -3.768 1.820e-03 0.110 -1.124 CAMSAP1L1 calmodulin regulated spectrin-associated protein 1-like 1 1 198975308 AB029001 1q32.1 Hs.23585 6    
212886_at -0.576 9.167 -3.765 1.833e-03 0.111 -1.130 CCDC69 coiled-coil domain containing 69 5 -150540805 AL080169 5q33.1 Hs.655336 3    
205478_at 0.803 11.526 3.764 1.835e-03 0.111 -1.131 PPP1R1A protein phosphatase 1, regulatory (inhibitor) subunit 1A 12 -53259290 NM_006741 12q13.2 Hs.505662 9

protein serine/threonine phosphatase inhibitor activity

protein binding

carbohydrate metabolic process

glycogen metabolic process

signal transduction

Long-term potentiation

200816_s_at -0.403 9.168 -3.763 1.839e-03 0.111 -1.133 PAFAH1B1 platelet-activating factor acetylhydrolase, isoform Ib, subunit 1 (45kDa) 17 2443672 NM_000430 17p13.3 Hs.77318 75

establishment of mitotic spindle orientation

astral microtubule

kinetochore

acrosome assembly

neuron migration

nucleus

cytoplasm

centrosome

spindle

cytosol

microtubule

microtubule associated complex

cell cortex

transport

cell cycle

mitosis

synaptic transmission

multicellular organismal development

nervous system development

neuroblast proliferation

learning or memory

microtubule binding

retrograde axon cargo transport

heparin binding

adult locomotory behavior

membrane

lipid catabolic process

corpus callosum morphogenesis

hippocampus development

layer formation in the cerebral cortex

cerebral cortex development

actin cytoskeleton organization

cell differentiation

microtubule organizing center organization

cell leading edge

motile primary cilium

nonmotile primary cilium

nuclear membrane

regulation of Rho GTPase activity

dynactin binding

protein homodimerization activity

phospholipase binding

dynein binding

platelet activating factor metabolic process

vesicle transport along microtubule

perinuclear region of cytoplasm

brain morphogenesis

neuromuscular process controlling balance

phosphoprotein binding

cell division

Ether lipid metabolism

Metabolic pathways

224177_s_at -0.591 6.290 -3.763 1.841e-03 0.111 -1.134 CXorf26 chromosome X open reading frame 26 X 75309172 AF151079 Xq13.3 Hs.370100 6

molecular_function

cellular_component

biological_process

 
208625_s_at -0.577 8.464 -3.760 1.851e-03 0.111 -1.139 EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 3 185515049, 185515664, 185520956 AF104913 3q27-qter Hs.433750 91

RNA binding

translation initiation factor activity

protein binding

cytoplasm

cytosol

regulation of translational initiation

RNA metabolic process

eukaryotic translation initiation factor 4F complex

interspecies interaction between organisms

 
205155_s_at 0.487 5.574 3.759 1.854e-03 0.112 -1.141 SPTBN2 spectrin, beta, non-erythrocytic 2 11 -66209296 NM_006946 11q13 Hs.26915 18

actin binding

structural constituent of cytoskeleton

cytoplasm

cytoskeleton

cell cortex

spectrin

cell death

vesicle-mediated transport

actin filament capping

 
1558689_a_at 0.347 3.184 3.758 1.860e-03 0.112 -1.144 LOC441461 hypothetical LOC441461 9   BG701300 9q31.1 Hs.163155 1    
1564537_a_at 0.584 6.672 3.757 1.863e-03 0.112 -1.145 ASB10 ankyrin repeat and SOCS box-containing 10 7 -150503717, -150503717 AK055536 7q36.1 Hs.647081 6

intracellular signaling cascade

modification-dependent protein catabolic process

 
228980_at -0.901 6.188 -3.753 1.878e-03 0.112 -1.152 RFFL ring finger and FYVE-like domain containing 1 17 -30360243, -30360243 AI760772 17q12 Hs.13680 11

protein binding

cytoplasm

intracellular protein transport

apoptosis

zinc ion binding

membrane

cytoplasmic membrane-bounded vesicle

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
203588_s_at -0.684 6.335 -3.752 1.880e-03 0.112 -1.153 TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) 3 -143154017 BG034328 3q23 Hs.379018 14

transcription factor activity

transcription cofactor activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

cell cycle

protein domain specific binding

Cell cycle

201994_at -0.501 11.098 -3.750 1.891e-03 0.113 -1.159 MORF4L2 mortality factor 4 like 2 X -102817083, -102817083 NM_012286 Xq22 Hs.326387 Hs.441076 Hs.597035 19

regulation of cell growth

molecular_function

protein binding

nucleus

nucleolus

DNA repair

response to DNA damage stimulus

chromatin modification

regulation of transcription

 
208767_s_at -1.610 9.437 -3.747 1.900e-03 0.113 -1.163 LAPTM4B lysosomal protein transmembrane 4 beta 8 98856984 AW149681 8q22.1 Hs.492314 17

transport

endomembrane system

membrane

integral to membrane

Lysosome

212530_at -0.643 9.438 -3.747 1.901e-03 0.113 -1.164 NEK7 NIMA (never in mitosis gene a)-related kinase 7 1 196392730 AL080111 1q31.3 Hs.24119 7

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

transferase activity

 
232267_at -0.707 5.050 -3.746 1.906e-03 0.113 -1.166 GPR133 G protein-coupled receptor 133 12 130004404 AL162032 12q24.33 Hs.719239 7

G-protein coupled receptor activity

G-protein coupled receptor activity

plasma membrane

neuropeptide signaling pathway

integral to membrane

integral to membrane

 
226180_at -0.880 6.777 -3.745 1.909e-03 0.113 -1.168 WDR36 WD repeat domain 36 5 110455768 BF439595 5q22.1 Hs.533237 19

molecular_function

cellular_component

rRNA processing

visual perception

small-subunit processome

response to stimulus

 
220617_s_at -0.482 8.309 -3.744 1.911e-03 0.113 -1.168 ZNF532 zinc finger protein 532 18 54681040 NM_018181 18q21.32 Hs.529023 Hs.607676 4

DNA binding

intracellular

nucleus

nucleolus

Golgi apparatus

zinc ion binding

regulation of transcription

metal ion binding

 
224149_x_at -0.889 6.677 -3.744 1.912e-03 0.113 -1.169 SLMAP sarcolemma associated protein 3 57718213 AF304450 3p21.2-p14.3 Hs.476432 11

smooth endoplasmic reticulum

plasma membrane

integral to plasma membrane

protein folding

muscle contraction

prefoldin complex

unfolded protein binding

 
1553678_a_at -0.726 8.235 -3.744 1.912e-03 0.113 -1.169 ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 10 -33236244, -33229251, -33229251, -33229251 NM_133376 10p11.2 Hs.643813 512

G1/S transition of mitotic cell cycle

in utero embryonic development

cell fate specification

receptor activity

integrin binding

focal adhesion

cellular defense response

cell adhesion

homophilic cell adhesion

leukocyte adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

positive regulation of cell proliferation

integrin complex

germ cell migration

cell surface

integral to membrane

synaptosome

B cell differentiation

neuromuscular junction

ruffle membrane

cell-cell adhesion mediated by integrin

sarcolemma

melanosome

identical protein binding

interspecies interaction between organisms

sarcomere organization

negative regulation of cell differentiation

protein heterodimerization activity

regulation of cell cycle

cardiac muscle cell differentiation

Axon guidance

Focal adhesion

ECM-receptor interaction

Cell adhesion molecules (CAMs)

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Pathogenic Escherichia coli infection - EHEC

Pathways in cancer

Small cell lung cancer

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

200878_at 0.562 10.038 3.744 1.913e-03 0.113 -1.169 EPAS1 endothelial PAS domain protein 1 2 46378066 AF052094 2p21-p16 Hs.468410 101

angiogenesis

response to hypoxia

embryonic placenta development

blood vessel remodeling

regulation of heart rate

RNA polymerase II transcription factor activity, enhancer binding

transcription coactivator activity

signal transducer activity

nucleus

transcription factor complex

transcription factor complex

cytoplasm

regulation of transcription, DNA-dependent

response to oxidative stress

mitochondrion organization

signal transduction

multicellular organismal development

visual perception

transcription factor binding

hemopoiesis

cell differentiation

erythrocyte differentiation

lung development

histone acetyltransferase binding

norepinephrine metabolic process

surfactant homeostasis

sequence-specific DNA binding

regulation of transcription from RNA polymerase II promoter in response to oxidative stress

positive regulation of transcription from RNA polymerase II promoter

protein heterodimerization activity

cell maturation

Pathways in cancer

Renal cell carcinoma

212502_at -0.631 7.500 -3.742 1.921e-03 0.113 -1.173 ADO 2-aminoethanethiol (cysteamine) dioxygenase 10 64234521 AV713053 10q21.3 Hs.99821 4

iron ion binding

oxidoreductase activity

metal ion binding

cysteamine dioxygenase activity

oxidation reduction

Taurine and hypotaurine metabolism

Metabolic pathways

207660_at 0.626 4.226 3.740 1.928e-03 0.114 -1.177 DMD dystrophin X -31106232, -31047265, -31047265, -31047265, -31047265, -31047265, -31047265, -31047265, -31047265, -31047265 NM_004019 Xp21.2 Hs.495912 240

actin binding

structural constituent of cytoskeleton

calcium ion binding

protein binding

cytoplasm

cytoskeleton

muscle organ development

zinc ion binding

structural constituent of muscle

structural constituent of muscle

cell surface

dystrophin-associated glycoprotein complex

sarcolemma

costamere

peptide biosynthetic process

nitric-oxide synthase binding

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

202263_at -0.596 11.457 -3.738 1.938e-03 0.114 -1.181 CYB5R1 cytochrome b5 reductase 1 1 -201197624 NM_016243 1p36.13-q41 Hs.334832 8

cytochrome-b5 reductase activity

electron carrier activity

membrane

integral to membrane

sterol biosynthetic process

oxidoreductase activity

oxidation reduction

Amino sugar and nucleotide sugar metabolism

225024_at -0.497 6.693 -3.736 1.944e-03 0.114 -1.184 RPRD1B regulation of nuclear pre-mRNA domain containing 1B 20 36095361 AL117521 20q11.21-q12 Hs.278839 7    
226897_s_at -0.762 5.631 -3.736 1.946e-03 0.114 -1.185 ZC3H7A zinc finger CCCH-type containing 7A 16 -11751942 AW169959 16p13-p12 Hs.371856 5

nucleic acid binding

intracellular

nucleus

zinc ion binding

metal ion binding

 
210024_s_at -0.765 10.303 -3.735 1.949e-03 0.114 -1.186 UBE2E3 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) 2 181553356, 181553586 AB017644 2q32.1 Hs.470804 20

nucleotide binding

ubiquitin-protein ligase activity

protein binding

ATP binding

nucleus

cytoplasm

ligase activity

modification-dependent protein catabolic process

regulation of growth

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

225339_at -0.653 8.195 -3.735 1.949e-03 0.114 -1.187 SPAG9 sperm associated antigen 9 17 -46394534 BG290577 17q21.33 Hs.463439 22

acrosomal vesicle

protein binding

cytoplasm

spermatogenesis

integral to membrane

positive regulation of cell migration

perinuclear region of cytoplasm

 
223168_at -0.787 8.352 -3.735 1.949e-03 0.114 -1.187 RHOU ras homolog gene family, member U 1 226937491 AL096776 1q42.11-q42.3 Hs.647774 12

G1/S transition of mitotic cell cycle

nucleotide binding

magnesium ion binding

podosome

GTPase activity

protein binding

GTP binding

intracellular

Golgi apparatus

plasma membrane

focal adhesion

small GTPase mediated signal transduction

regulation of cell shape

Rac protein signal transduction

actin cytoskeleton organization

cell junction

cell projection

 
213489_at -0.865 7.624 -3.734 1.954e-03 0.114 -1.189 MAPRE2 microtubule-associated protein, RP/EB family, member 2 18 30810889, 30812205, 30875321 BE671156 18q12.1-q12.2 Hs.532824 27

cytoplasm

microtubule

cell cycle

mitosis

signal transduction

microtubule binding

cell proliferation

cell division

 
214733_s_at -0.404 6.482 -3.733 1.956e-03 0.114 -1.190 YIPF1 Yip1 domain family, member 1 1 -54089993 AL031427 1p33-p32.1 Hs.11923 9

membrane

integral to membrane

transport vesicle

 
212061_at -0.661 7.260 -3.733 1.956e-03 0.114 -1.190 SR140 U2-associated SR140 protein 3 144203061 AB002330 3q23 Hs.596572 4

nucleotide binding

RNA binding

RNA processing

 
226942_at -0.645 5.788 -3.732 1.959e-03 0.114 -1.191 PHF20L1 PHD finger protein 20-like 1 8 133856785, 133856785, 133856785 AI742668 8q24.22 Hs.304362 4

nucleic acid binding

protein binding

zinc ion binding

metal ion binding

 
226178_at -0.674 5.352 -3.731 1.963e-03 0.114 -1.193 SOCS4 suppressor of cytokine signaling 4 14 54563593 BF446961 14q22.2-q22.3 Hs.708344 7

protein binding

intracellular signaling cascade

negative regulation of signal transduction

modification-dependent protein catabolic process

regulation of growth

Jak-STAT signaling pathway

Insulin signaling pathway

Type II diabetes mellitus

219232_s_at -0.695 3.685 -3.730 1.968e-03 0.115 -1.196 EGLN3 egl nine homolog 3 (C. elegans) 14 -33463171 NM_022073 14q13.1 Hs.135507 26

iron ion binding

protein binding

nucleus

cytoplasm

apoptosis

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

L-ascorbic acid binding

metal ion binding

oxidation reduction

Pathways in cancer

Renal cell carcinoma

214552_s_at -1.072 5.461 -3.730 1.970e-03 0.115 -1.196 RABEP1 rabaptin, RAB GTPase binding effector protein 1 17 5126281 AF098638 17p13.2 Hs.584784 Hs.592121 19

GTPase activator activity

protein binding

cytoplasm

early endosome

endocytosis

apoptosis

membrane fusion

growth factor activity

protein transport

recycling endosome

Endocytosis

227534_at -0.767 6.441 -3.729 1.972e-03 0.115 -1.198 C9orf21 chromosome 9 open reading frame 21 9 -98443353 AI655189 9q22.32 Hs.44640 4    
206847_s_at 0.854 7.004 3.725 1.988e-03 0.115 -1.205 HOXA7 homeobox A7 7 -27159862 AF026397 7p15-p14 Hs.660918 24

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anterior/posterior pattern formation

transcription repressor activity

sequence-specific DNA binding

negative regulation of keratinocyte differentiation

positive regulation of transcription from RNA polymerase II promoter

embryonic skeletal system morphogenesis

 
224559_at -0.861 7.327 -3.725 1.989e-03 0.115 -1.205 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 11 65021808 AF001540 11q13.1 Hs.642877 Hs.714394 8    
212877_at -0.639 7.090 -3.724 1.993e-03 0.115 -1.207 KLC1 kinesin light chain 1 14 103165277, 103165277 AA284075 14q32.3 Hs.20107 Hs.657678 31

microtubule motor activity

protein binding

cytoplasm

cytosol

kinesin complex

microtubule

axon cargo transport

axon

cytoplasmic vesicle

ciliary rootlet

membrane-bounded organelle

 
218829_s_at -0.522 6.856 -3.724 1.993e-03 0.115 -1.207 CHD7 chromodomain helicase DNA binding protein 7 8 61753892 NM_017780 8q12.1-q12.2 Hs.20395 36

nucleotide binding

chromatin

skeletal system development

blood vessel development

in utero embryonic development

heart morphogenesis

DNA binding

chromatin binding

helicase activity

ATP binding

nucleus

chromatin assembly or disassembly

central nervous system development

adult heart development

sensory perception of sound

locomotory behavior

adult walking behavior

blood circulation

chromatin modification

hydrolase activity

cranial nerve development

T cell differentiation

female genitalia development

embryonic hindlimb morphogenesis

positive regulation of multicellular organism growth

inner ear morphogenesis

nose development

regulation of transcription

cognition

palate development

retina development in camera-type eye

regulation of growth hormone secretion

limb development

face development

 
224722_at -0.534 5.014 -3.722 2.000e-03 0.115 -1.210 MIB1 mindbomb homolog 1 (Drosophila) 18 17575542 BE048628 18q11.2 Hs.140903 Hs.658808 15

blood vessel development

in utero embryonic development

somitogenesis

neural tube formation

heart looping

ubiquitin-protein ligase activity

protein binding

cytoplasm

plasma membrane

Notch signaling pathway

heart development

zinc ion binding

protein ubiquitination

ligase activity

modification-dependent protein catabolic process

cytoplasmic vesicle

negative regulation of neuron differentiation

positive regulation of endocytosis

metal ion binding

 
201686_x_at -0.424 5.513 -3.722 2.001e-03 0.115 -1.211 API5 apoptosis inhibitor 5 11 43290080 AF229254 11p11.2 Hs.435771 15

binding

nucleus

spliceosomal complex

cytoplasm

apoptosis

anti-apoptosis

anti-apoptosis

anti-apoptosis

fibroblast growth factor binding

 
209106_at -0.607 7.862 -3.720 2.011e-03 0.116 -1.215 NCOA1 nuclear receptor coactivator 1 2 24660849 BF576458 2p23 Hs.596314 123

DNA binding

chromatin binding

transcription coactivator activity

histone acetyltransferase activity

signal transducer activity

nucleus

signal transduction

acyltransferase activity

transferase activity

androgen receptor signaling pathway

transcription regulator activity

nuclear hormone receptor binding

positive regulation of transcription from RNA polymerase II promoter

protein N-terminus binding

androgen receptor binding

 
204198_s_at 0.443 3.687 3.716 2.026e-03 0.116 -1.222 RUNX3 runt-related transcription factor 3 1 -25098588, -25098588 AA541630 1p36 Hs.170019 95

transcription factor activity

protein binding

ATP binding

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

induction of apoptosis

cell proliferation

negative regulation of cell cycle

negative regulation of epithelial cell proliferation

 
219269_at 1.718 6.784 3.716 2.026e-03 0.116 -1.222 HMBOX1 homeobox containing 1 8 28803829, 28804143 NM_024567 8p21.1 Hs.591836 5

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

sequence-specific DNA binding

 
201635_s_at -0.826 9.811 -3.716 2.026e-03 0.116 -1.222 FXR1 fragile X mental retardation, autosomal homolog 1 3 182113145 AI990766 3q28 Hs.478407 30

RNA binding

nucleolus

cytoplasm

polysome

apoptosis

multicellular organismal development

muscle organ development

cell differentiation

 
218546_at 0.729 6.346 3.713 2.040e-03 0.116 -1.228 C1orf115 chromosome 1 open reading frame 115 1 218930250 NM_024709 1q41 Hs.519839 6

membrane

integral to membrane

 
225477_s_at -0.583 7.335 -3.713 2.040e-03 0.116 -1.228 NR2C2 nuclear receptor subfamily 2, group C, member 2 3 14964239 AL138444 3p25 Hs.555973 22

transcription factor activity

steroid hormone receptor activity

transcription coactivator activity

nucleus

nucleolus

regulation of transcription, DNA-dependent

nervous system development

zinc ion binding

sequence-specific DNA binding

metal ion binding

spermatocyte division

 
211652_s_at -1.973 4.811 -3.712 2.041e-03 0.116 -1.229 LBP lipopolysaccharide binding protein 20 36408298 M35533 20q11.23-q12 Hs.154078 58

lipopolysaccharide binding

macrophage activation during immune response

receptor binding

extracellular region

extracellular region

extracellular space

extracellular space

nucleus

lipid transport

acute-phase response

acute-phase response

cellular defense response

opsonization

opsonization

lipid binding

lipopolysaccharide transport

lipopolysaccharide-mediated signaling pathway

detection of molecule of bacterial origin

response to lipopolysaccharide

negative regulation of tumor necrosis factor production

positive regulation of interleukin-6 production

positive regulation of interleukin-8 production

positive regulation of tumor necrosis factor production

positive regulation of tumor necrosis factor production

positive regulation of toll-like receptor 4 signaling pathway

positive regulation of macrophage activation

cell surface binding

innate immune response

innate immune response

defense response to Gram-negative bacterium

defense response to Gram-positive bacterium

defense response to Gram-positive bacterium

Gram-negative bacterial cell surface binding

Gram-negative bacterial cell surface binding

Gram-positive bacterial cell surface binding

positive regulation of respiratory burst during acute inflammatory response

Toll-like receptor signaling pathway

200992_at -0.397 9.968 -3.712 2.042e-03 0.116 -1.230 IPO7 importin 7 11 9362744 AL137335 11p15.4 Hs.718440 22

protein import into nucleus, docking

small GTPase regulator activity

transporter activity

soluble fraction

nucleus

nuclear pore

cytoplasm

intracellular protein transport

signal transduction

Ran GTPase binding

protein transporter activity

histone binding

interspecies interaction between organisms

 
206567_s_at -0.727 7.452 -3.709 2.054e-03 0.116 -1.235 PHF20 PHD finger protein 20 20 33823336 NM_016436 20q11.22-q11.23 Hs.517044 11

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
202578_s_at -0.573 6.202 -3.707 2.065e-03 0.117 -1.239 DDX19A DEAD (Asp-Glu-Ala-As) box polypeptide 19A 16 68938324 NM_018332 16q22.1 Hs.656037 5

nucleotide binding

RNA binding

helicase activity

ATP binding

nucleus

nuclear pore

cytoplasm

ATP-dependent helicase activity

protein transport

membrane

hydrolase activity

mRNA transport

intracellular protein transmembrane transport

 
213885_at 0.349 5.643 3.706 2.067e-03 0.117 -1.240 TRIM3 tripartite motif-containing 3 11 -6426418 AA114843 11p15.5 Hs.591992 11

intracellular

cytoplasm

early endosome

nervous system development

protein C-terminus binding

zinc ion binding

protein transport

metal ion binding

 
218193_s_at -0.751 5.717 -3.705 2.072e-03 0.117 -1.243 GOLT1B golgi transport 1 homolog B (S. cerevisiae) 12 21545965 NM_016072 12p12.1 Hs.62275 10

signal transducer activity

endoplasmic reticulum

Golgi apparatus

protein transport

membrane

integral to membrane

vesicle-mediated transport

positive regulation of I-kappaB kinase/NF-kappaB cascade

 
243309_at -0.833 5.284 -3.704 2.075e-03 0.117 -1.244 FLJ27352 hypothetical LOC145788 15   AA398658 15q21.3 Hs.97300      
226342_at -0.761 6.899 -3.702 2.085e-03 0.117 -1.249 SPTBN1 spectrin, beta, non-erythrocytic 1 2 54536957, 54639034 AW593244 2p21 Hs.503178 Hs.705692 46

actin binding

structural constituent of cytoskeleton

calmodulin binding

nucleus

nucleolus

cytoplasm

plasma membrane

common-partner SMAD protein phosphorylation

SMAD protein nuclear translocation

spectrin

cortical cytoskeleton

M band

actin filament capping

 
221207_s_at 0.678 6.864 3.701 2.089e-03 0.117 -1.250 NBEA neurobeachin 13 34414455 NM_015678 13q13 Hs.491172 11

protein binding

cytoplasm

trans-Golgi network

cytosol

plasma membrane

protein localization

endomembrane system

protein kinase binding

 
221823_at -0.727 5.944 -3.699 2.097e-03 0.117 -1.254 C5orf30 chromosome 5 open reading frame 30 5 102622340 AL565741 5q21.1 Hs.482976 4    
225805_at -0.763 5.331 -3.699 2.098e-03 0.117 -1.254 HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 1 -243080224 AW137669 1q44 Hs.106212 47

nucleotide binding

nuclear mRNA splicing, via spliceosome

DNA binding

RNA binding

protein binding

ATP binding

nucleus

spliceosomal complex

RNA splicing

cell surface

heterogeneous nuclear ribonucleoprotein complex

 
205975_s_at 0.549 4.748 3.699 2.099e-03 0.117 -1.255 HOXD1 homeobox D1 2 176761552 NM_024501 2q31.1 Hs.83465 14

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

sequence-specific DNA binding

 
217599_s_at -1.133 5.959 -3.699 2.100e-03 0.117 -1.255 MDFIC MyoD family inhibitor domain containing 7 114349444 BE910600 7q31.1-q31.2 Hs.427236 7

nucleus

nucleolus

cytoplasm

activation of JUN kinase activity

regulation of Wnt receptor signaling pathway

cyclin binding

Tat protein binding

interspecies interaction between organisms

regulation of transcription

positive regulation of viral transcription

 
224413_s_at -0.582 7.148 -3.698 2.102e-03 0.117 -1.256 TM2D2 TM2 domain containing 2 8 -38965483 AF353991 8p11.22 Hs.7471 5

membrane

integral to membrane

 
230284_at -1.012 6.234 -3.698 2.104e-03 0.117 -1.257 MYOM3 myomesin family, member 3 1 -24255117 BF108688 1p36.11 Hs.523413 4    
232149_s_at -0.663 5.613 -3.697 2.109e-03 0.118 -1.259 NSMAF neutral sphingomyelinase (N-SMase) activation associated factor 8 -59658619, -59658619 BF056507 8q12-q13 Hs.372000 8

receptor signaling protein activity

soluble fraction

cytoplasm

ceramide metabolic process

signal transduction

 
200818_at 0.408 12.156 3.697 2.109e-03 0.118 -1.259 ATP5O ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit 21 -34197626 NM_001697 21q22.1-q22.2 21q22.11 Hs.409140 12

transporter activity

mitochondrion

mitochondrial proton-transporting ATP synthase complex

mitochondrial proton-transporting ATP synthase complex

plasma membrane

ATP catabolic process

ion transport

drug binding

proton transport

ATPase activity

mitochondrial ATP synthesis coupled proton transport

proton-transporting ATP synthase complex, catalytic core F(1)

hydrogen ion transporting ATP synthase activity, rotational mechanism

proton-transporting ATPase activity, rotational mechanism

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

231887_s_at 0.508 6.042 3.693 2.125e-03 0.118 -1.266 KIAA1274 KIAA1274 10 71908569 AB033100 10q22.1 Hs.202351 5    
206303_s_at -0.614 6.900 -3.693 2.127e-03 0.118 -1.267 NUDT4 nudix (nucleoside diphosphate linked moiety X)-type motif 4 12 92295831 AF191653 12q21 Hs.506325 10

magnesium ion binding

intracellular

cytoplasm

intracellular signaling cascade

diphosphoinositol-polyphosphate diphosphatase activity

cyclic nucleotide metabolic process

hydrolase activity

calcium-mediated signaling

cyclic-nucleotide-mediated signaling

manganese ion binding

regulation of RNA export from nucleus

intracellular transport

 
231845_at 0.345 5.932 3.692 2.130e-03 0.118 -1.268 AARS2 alanyl-tRNA synthetase 2, mitochondrial (putative) 6 -44374440 AI721172 6p21.1 Hs.158381 7

nucleotide binding

nucleic acid binding

alanine-tRNA ligase activity

ATP binding

cytoplasm

mitochondrion

mitochondrial matrix

translation

alanyl-tRNA aminoacylation

ligase activity

tRNA aminoacylation

Aminoacyl-tRNA biosynthesis

218330_s_at 1.115 5.815 3.691 2.135e-03 0.118 -1.270 NAV2 neuron navigator 2 11 19328846, 19691456, 20001211 NM_018162 11p15.1 Hs.502116 Hs.551898 Hs.639427 Hs.639428 18

nucleotide binding

helicase activity

ATP binding

nucleus

nucleolus

cytoplasm

hydrolase activity

 
1554863_s_at -0.697 7.602 -3.691 2.136e-03 0.118 -1.271 DOK5 docking protein 5 20 52525672 BC008992 20q13.2 Hs.656582 10

MAPKKK cascade

transmembrane receptor protein tyrosine kinase signaling protein activity

insulin receptor binding

transmembrane receptor protein tyrosine kinase signaling pathway

nervous system development

 
1568618_a_at -0.870 7.864 -3.690 2.138e-03 0.118 -1.271 GALNT1 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) 18 31488530 BC038440 18q12.1 Hs.514806 26

polypeptide N-acetylgalactosaminyltransferase activity

calcium ion binding

sugar binding

extracellular region

Golgi apparatus

membrane

integral to membrane

transferase activity, transferring glycosyl groups

protein amino acid O-linked glycosylation via serine

protein amino acid O-linked glycosylation via threonine

manganese ion binding

perinuclear region of cytoplasm

O-Glycan biosynthesis

Metabolic pathways

221898_at -0.708 6.126 -3.689 2.141e-03 0.118 -1.273 PDPN podoplanin 1 13782838, 13784553 AU154455 1p36.21 Hs.468675 48

cell morphogenesis

ruffle

lymphangiogenesis

plasma membrane

integral to plasma membrane

prostaglandin metabolic process

water transport

cell cycle

signal transduction

multicellular organismal development

cell proliferation

regulation of cell shape

folic acid transporter activity

amino acid transmembrane transporter activity

water channel activity

folic acid transport

cell-cell adhesion

lamellipodium

filopodium

positive regulation of cell migration

tube morphogenesis

lung alveolus development

 
201591_s_at 0.422 7.508 3.688 2.147e-03 0.118 -1.275 NISCH nischarin 3 52464563 NM_007184 3p21.1 Hs.435290 16

receptor activity

integrin binding

protein binding

membrane fraction

cytoplasm

early endosome

cytosol

plasma membrane

glucose metabolic process

apoptosis

cell communication

regulation of blood pressure

amine receptor activity

Rac protein signal transduction

actin cytoskeleton organization

negative regulation of cell migration

regulation of synaptic transmission, GABAergic

phosphoinositide binding

norepinephrine secretion

recycling endosome

 
204225_at -0.933 7.940 -3.688 2.149e-03 0.118 -1.276 HDAC4 histone deacetylase 4 2 -239634800 NM_006037 2q37.3 Hs.20516 Hs.688314 83

histone deacetylase complex

negative regulation of transcription from RNA polymerase II promoter

skeletal system development

DNA binding

histone deacetylase activity

nucleus

cytoplasm

inflammatory response

cell cycle

multicellular organismal development

nervous system development

transcription factor binding

negative regulation of cell proliferation

transcription repressor activity

chromatin modification

hydrolase activity

B cell differentiation

positive regulation of protein sumoylation

negative regulation of striated muscle development

 
213787_s_at 0.574 6.315 3.686 2.154e-03 0.118 -1.278 EBP emopamil binding protein (sterol isomerase) X 48265107 AV702405 Xp11.23-p11.22 Hs.30619 19

C-8 sterol isomerase activity

skeletal system development

steroid delta-isomerase activity

transmembrane receptor activity

endoplasmic reticulum

microsome

integral to plasma membrane

cholesterol biosynthetic process

drug transporter activity

membrane

isomerase activity

hemopoiesis

cholestenol delta-isomerase activity

Steroid biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

219297_at -0.469 6.172 -3.684 2.165e-03 0.119 -1.283 WDR44 WD repeat domain 44 X 117364069 NM_019045 Xq24 Hs.98510 16

cytoplasm

endosome

Golgi apparatus

cytosol

endosome membrane

membrane

perinuclear region of cytoplasm

 
218891_at -0.427 7.142 -3.684 2.166e-03 0.119 -1.284 C10orf76 chromosome 10 open reading frame 76 10 -103595345 NM_024541 10q24.32 Hs.16004 4

membrane

integral to membrane

 
201955_at -0.513 7.090 -3.681 2.177e-03 0.119 -1.288 CCNC cyclin C 6 -100096983 AL137784 6q21 Hs.430646 Hs.633351 31

protein binding

nucleus

regulation of transcription

 
212995_x_at 0.618 8.794 3.681 2.177e-03 0.119 -1.288 FAM128B family with sequence similarity 128, member B 2 130656172 BG255188 2q21.1 Hs.469925 Hs.516450 2    
201078_at -0.737 7.859 -3.680 2.182e-03 0.119 -1.290 TM9SF2 transmembrane 9 superfamily member 2 13 98951728 NM_004800 13q32.3 Hs.654824 9

endosome

integral to plasma membrane

transport

membrane

 
212307_s_at -0.496 7.187 -3.680 2.184e-03 0.119 -1.291 OGT O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) X 70669657 BF001665 Xq13 Hs.405410 47

protein binding

nucleus

cytoplasm

cytosol

protein amino acid O-linked glycosylation

signal transduction

response to nutrient

acetylglucosaminyltransferase activity

transferase activity, transferring glycosyl groups

MLL5-L complex

O-Glycan biosynthesis

Metabolic pathways

201675_at 0.639 10.658 3.680 2.184e-03 0.119 -1.291 AKAP1 A kinase (PRKA) anchor protein 1 17 52517551 NM_003488 17q21-q23 Hs.463506 27

RNA binding

protein binding

cytoplasm

mitochondrion

mitochondrial outer membrane

membrane

integral to membrane

 
200605_s_at -0.931 9.785 -3.679 2.185e-03 0.119 -1.291 PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) 17 64019704, 64020137 NM_002734 17q23-q24 Hs.280342 106

nucleotide binding

mesoderm formation

regulation of protein amino acid phosphorylation

protein binding

cAMP-dependent protein kinase complex

regulation of transcription from RNA polymerase II promoter

cAMP-dependent protein kinase regulator activity

hormone-mediated signaling

cAMP binding

neuromuscular junction

Apoptosis

Insulin signaling pathway

211559_s_at -0.697 3.531 -3.679 2.185e-03 0.119 -1.292 CCNG2 cyclin G2 4 78297380 L49506 4q21.1 Hs.13291 12

cell cycle checkpoint

cytoplasm

cell cycle

mitosis

cell division

p53 signaling pathway

207196_s_at -0.483 8.706 -3.678 2.191e-03 0.119 -1.294 TNIP1 TNFAIP3 interacting protein 1 5 -150389698 NM_006058 5q32-q33.1 Hs.355141 31

protein binding

intracellular

nucleus

cytoplasm

translation

defense response

glycoprotein biosynthetic process

pathogenesis

negative regulation of viral genome replication

 
208598_s_at -0.446 7.922 -3.678 2.192e-03 0.119 -1.295 HUWE1 HECT, UBA and WWE domain containing 1 X -53575796 NM_005703 Xp11.22 Hs.136905 28

protein polyubiquitination

DNA binding

ubiquitin-protein ligase activity

protein binding

intracellular

nucleus

nucleolus

cytoplasm

protein modification process

histone ubiquitination

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

cell differentiation

Ubiquitin mediated proteolysis

207382_at -0.839 8.137 -3.677 2.195e-03 0.119 -1.296 TP63 tumor protein p63 3 190831909, 190831909, 190990142, 190990142 NM_003722 3q28 Hs.137569 238

response to tumor cell

transcription factor activity

nucleus

nucleus

cytoplasm

apoptosis

induction of apoptosis

multicellular organismal development

zinc ion binding

transcription activator activity

transcription activator activity

transcription repressor activity

negative regulation of cell growth

identical protein binding

positive regulation of Notch signaling pathway

negative regulation of transcription, DNA-dependent

positive regulation of transcription, DNA-dependent

metal ion binding

protein homotetramerization

 
201454_s_at -0.714 9.084 -3.676 2.199e-03 0.119 -1.297 NPEPPS aminopeptidase puromycin sensitive 17 42963442 AW055008 17q21 Hs.443837 14

aminopeptidase activity

protein binding

nucleus

cytoplasm

cytosol

proteolysis

peptidase activity

metallopeptidase activity

zinc ion binding

metal ion binding

 
226055_at -1.057 7.210 -3.676 2.201e-03 0.119 -1.298 ARRDC2 arrestin domain containing 2 19 17972943, 17979976 AK000689 19p13.11 Hs.515249 6    
218966_at 0.689 6.083 3.674 2.211e-03 0.119 -1.302 MYO5C myosin VC 15 -50271811 NM_018728 15q21 Hs.487036 6

nucleotide binding

motor activity

calmodulin binding

ATP binding

myosin complex

actin filament binding

 
205898_at 1.011 6.220 3.674 2.212e-03 0.119 -1.303 CX3CR1 chemokine (C-X3-C motif) receptor 1 3 -39279988 U20350 3p21 3p21.3 Hs.78913 123

receptor activity

G-protein coupled receptor activity

chemokine receptor activity

protein binding

plasma membrane

integral to plasma membrane

chemotaxis

cellular defense response

cell adhesion

signal transduction

G-protein coupled receptor protein signaling pathway

response to wounding

interspecies interaction between organisms

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

212428_at -0.740 9.043 -3.672 2.218e-03 0.120 -1.305 KIAA0368 KIAA0368 9 -113162793 AW001101 9q31.3 Hs.368255 12

proteasome complex

binding

nucleus

early endosome

late endosome

endoplasmic reticulum

ER-Golgi intermediate compartment

trans-Golgi network

centrosome

cytosol

cytoplasmic membrane-bounded vesicle

ER to Golgi transport vesicle

ER-associated protein catabolic process

 
204998_s_at 1.933 6.902 3.670 2.227e-03 0.120 -1.309 ATF5 activating transcription factor 5 19 55123785 NM_012068 19q13.3 Hs.9754 25

transcription factor activity

RNA polymerase II transcription factor activity

transcription corepressor activity

nucleus

transcription factor complex

cytoplasm

regulation of transcription from RNA polymerase II promoter

anti-apoptosis

sequence-specific DNA binding

protein dimerization activity

 
242660_at 0.873 3.258 3.669 2.232e-03 0.120 -1.311 C10orf112 chromosome 10 open reading frame 112 10   AA846789 10p12.31 Hs.662505 4

membrane

integral to membrane

 
228186_s_at -0.803 8.382 -3.668 2.237e-03 0.120 -1.313 RSPO3 R-spondin 3 homolog (Xenopus laevis) 6 127481740 BF589322 6q22.33 Hs.135254 10

extracellular region

heparin binding

Wnt receptor signaling pathway

response to stimulus

 
225886_at -0.470 6.944 -3.666 2.246e-03 0.120 -1.317 DDX5 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 17 -59924835 AA156797 17q21 Hs.279806 50

nucleotide binding

RNA binding

RNA helicase activity

protein binding

ATP binding

nucleus

spliceosomal complex

nucleolus

mRNA processing

ATP-dependent helicase activity

RNA splicing

cell growth

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

 
217783_s_at -0.440 8.135 -3.666 2.246e-03 0.120 -1.317 YPEL5 yippee-like 5 (Drosophila) 2 30223253 NM_016061 2p23.1 Hs.515890 6    
218115_at 0.454 5.553 3.665 2.253e-03 0.120 -1.320 ASF1B ASF1 anti-silencing function 1 homolog B (S. cerevisiae) 19 -14091320 NM_018154 19p13.12 Hs.26516 15

chromatin

nucleus

chromatin assembly or disassembly

nucleosome assembly

multicellular organismal development

spermatogenesis

chromatin modification

cell differentiation

histone binding

regulation of transcription

 
219929_s_at 0.544 6.247 3.663 2.258e-03 0.120 -1.322 ZFYVE21 zinc finger, FYVE domain containing 21 14 103251897 NM_024071 14q32.33 Hs.592322 4

zinc ion binding

metal ion binding

 
203846_at -0.628 7.396 -3.663 2.259e-03 0.120 -1.322 TRIM32 tripartite motif-containing 32 9 118489401 BC003154 9q33.1 Hs.591910 18

transcription coactivator activity

intracellular

nucleus

cytoplasm

zinc ion binding

ligase activity

modification-dependent protein catabolic process

protein ubiquitination during ubiquitin-dependent protein catabolic process

ubiquitin binding

protein self-association

fat cell differentiation

metal ion binding

Ubiquitin mediated proteolysis

217996_at -0.942 5.076 -3.663 2.260e-03 0.120 -1.323 PHLDA1 pleckstrin homology-like domain, family A, member 1 12 -74705493 AA576961 12q15 Hs.602085 15

protein binding

nucleus

nucleolus

cytoplasm

apoptosis

membrane

cytoplasmic vesicle membrane

cytoplasmic vesicle

FasL biosynthetic process

 
217781_s_at -0.710 11.287 -3.663 2.262e-03 0.120 -1.323 ZFP106 zinc finger protein 106 homolog (mouse) 15 -40492312 NM_022473 15q15.1 Hs.511143 9

opioid peptide activity

intracellular

membrane fraction

nucleus

nucleolus

cytosol

zinc ion binding

insulin receptor signaling pathway

SH3 domain binding

metal ion binding

 
1555950_a_at -0.829 7.589 -3.659 2.280e-03 0.121 -1.330 CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 1 205561439 CA448665 1q32 Hs.126517 118

soluble fraction

plasma membrane

integral to plasma membrane

complement activation, classical pathway

elevation of cytosolic calcium ion concentration

anchored to membrane

innate immune response

membrane raft

respiratory burst

Complement and coagulation cascades

Hematopoietic cell lineage

1552770_s_at 0.431 4.807 3.659 2.280e-03 0.121 -1.331 ZNF563 zinc finger protein 563 19 -12289305 NM_145276 19p13.2 Hs.663510 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
203957_at -0.663 6.571 -3.659 2.280e-03 0.121 -1.331 E2F6 E2F transcription factor 6 2 -11501951 NM_001952 2p25.1 Hs.603093 24

regulation of transcription of G1/S-phase of mitotic cell cycle

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

transcription corepressor activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

cell cycle

 
1554452_a_at 0.540 5.420 3.659 2.281e-03 0.121 -1.331 C7orf68 chromosome 7 open reading frame 68 7 127883119 BC001863 7q32.1 Hs.710088 9

molecular_function

cellular_component

response to stress

membrane

integral to membrane

 
209513_s_at 0.583 9.661 3.658 2.283e-03 0.121 -1.332 HSDL2 hydroxysteroid dehydrogenase like 2 9 114182171 BC004331 9q32 Hs.59486 6

binding

sterol carrier activity

oxidoreductase activity

oxidation reduction

 
224616_at -0.403 9.374 -3.658 2.284e-03 0.121 -1.332 DYNC1LI2 dynein, cytoplasmic 1, light intermediate chain 2 16 -65312299 BG110975 16q22.1 Hs.369068 10

nucleotide binding

motor activity

ATP binding

cytoplasmic dynein complex

microtubule

 
223339_at 0.606 7.497 3.655 2.299e-03 0.122 -1.338 ATPIF1 ATPase inhibitory factor 1 1 28435197 BC001867   Hs.590908 13

angiogenesis

negative regulation of endothelial cell proliferation

calmodulin binding

mitochondrion

mitochondrion

mitochondrial proton-transporting ATP synthase complex

generation of precursor metabolites and energy

cell surface

ATPase inhibitor activity

ATPase inhibitor activity

protein homodimerization activity

angiostatin binding

negative regulation of nucleotide metabolic process

ATPase binding

ATPase binding

protein homotetramerization

negative regulation of hydrolase activity

negative regulation of hydrolase activity

 
225972_at -1.036 6.355 -3.654 2.303e-03 0.122 -1.340 TMEM64 transmembrane protein 64 8 -91703398 AA524005 8q21.3 Hs.567759 2

membrane

integral to membrane

 
206891_at -2.740 9.865 -3.654 2.303e-03 0.122 -1.340 ACTN3 actinin, alpha 3 11 66070966 NM_001104 11q13.1 Hs.654432 47

actin binding

integrin binding

calcium ion binding

protein binding

actin filament

focal adhesion

structural constituent of muscle

pseudopodium

protein homodimerization activity

regulation of apoptosis

focal adhesion formation

Focal adhesion

Adherens junction

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Systemic lupus erythematosus

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

202842_s_at -0.603 8.301 -3.653 2.305e-03 0.122 -1.341 DNAJB9 DnaJ (Hsp40) homolog, subfamily B, member 9 7 107997591 AL080081 14q24.2-q24.3 7q31 Hs.6790 16

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

protein folding

heat shock protein binding

unfolded protein binding

 
207550_at 0.490 3.170 3.652 2.314e-03 0.122 -1.344 MPL myeloproliferative leukemia virus oncogene 1 43576061 NM_005373 1p34 Hs.82906 85

cytokine receptor activity

plasma membrane

integral to plasma membrane

cell surface receptor linked signal transduction

cell proliferation

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

225814_at -0.610 8.189 -3.651 2.315e-03 0.122 -1.344 XRN1 5'-3' exoribonuclease 1 3 -143508138 BG534738 3q23 Hs.435103 12

DNA binding

RNA binding

protein binding

intracellular

cytoplasm

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

5'-3' exonuclease activity

hydrolase activity

RNA degradation

221483_s_at -0.453 9.330 -3.651 2.315e-03 0.122 -1.345 ARPP19 cAMP-regulated phosphoprotein, 19kDa 15 -50626723 AF084555 15q21.2 Hs.512908 10

receptor binding

cytoplasm

potassium channel regulator activity

positive regulation of gluconeogenesis

positive regulation of glucose import

 
230405_at 0.410 7.327 3.651 2.316e-03 0.122 -1.345 C5orf56 chromosome 5 open reading frame 56 5 131774571 AI143416 5q31.1 Hs.658288 1    
239213_at 0.448 4.754 3.649 2.329e-03 0.122 -1.350 SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 6 -2778732 W52010 6p25 Hs.381167 18

serine-type endopeptidase inhibitor activity

cytoplasm

peptidase inhibitor activity

 
224437_s_at -0.594 8.207 -3.648 2.329e-03 0.122 -1.350 VTA1 Vps20-associated 1 homolog (S. cerevisiae) 6 142510102 BC005937 6q24.1 Hs.431367 12

cytoplasm

endosome

protein transport

membrane

Endocytosis

209895_at -1.430 5.951 -3.648 2.330e-03 0.122 -1.351 PTPN11 protein tyrosine phosphatase, non-receptor type 11 12 111340918 AF119855 12q24 Hs.506852 Hs.646231 326

non-membrane spanning protein tyrosine phosphatase activity

non-membrane spanning protein tyrosine phosphatase activity

protein binding

cytoplasm

cytosol

protein amino acid dephosphorylation

signal transduction

hydrolase activity

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Adipocytokine signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

Renal cell carcinoma

Chronic myeloid leukemia

224376_s_at -0.782 10.037 -3.646 2.340e-03 0.122 -1.354 C20orf24 chromosome 20 open reading frame 24 20 34667580, 34667605 AF274948 20q11.23 Hs.584985 7

molecular_function

protein binding

cellular_component

biological_process

 
208884_s_at -0.661 7.241 -3.645 2.345e-03 0.122 -1.357 UBR5 ubiquitin protein ligase E3 component n-recognin 5 8 -103334744 AF006010 8q22 Hs.591856 21

RNA binding

ubiquitin-protein ligase activity

protein binding

intracellular

soluble fraction

nucleus

protein modification process

ubiquitin-dependent protein catabolic process

response to DNA damage stimulus

zinc ion binding

cell proliferation

ligase activity

acid-amino acid ligase activity

metal ion binding

progesterone receptor signaling pathway

Ubiquitin mediated proteolysis

201946_s_at -0.859 8.231 -3.644 2.350e-03 0.122 -1.358 CCT2 chaperonin containing TCP1, subunit 2 (beta) 12 68265474 AL545982 12q15 Hs.189772 19

nucleotide binding

ATP binding

nucleus

nucleolus

cytoplasm

cytosol

chaperonin-containing T-complex

protein folding

unfolded protein binding

 
203785_s_at -0.605 6.058 -3.642 2.362e-03 0.123 -1.363 DDX28 DEAD (Asp-Glu-Ala-Asp) box polypeptide 28 16 -66612674 NM_018380 16q22.1 Hs.458313 9

nucleotide binding

RNA binding

helicase activity

ATP binding

nucleus

mitochondrion

ATP-dependent helicase activity

hydrolase activity

mitochondrial nucleoid

 
208322_s_at -0.585 7.144 -3.638 2.380e-03 0.124 -1.370 ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 8 -134536272 NM_003033 8q24.22 Hs.374257 20

beta-galactoside alpha-2,3-sialyltransferase activity

extracellular region

Golgi apparatus

protein amino acid glycosylation

membrane

integral to membrane

integral to Golgi membrane

O-Glycan biosynthesis

Keratan sulfate biosynthesis

Glycosphingolipid biosynthesis - globo series

Glycosphingolipid biosynthesis - ganglio series

Metabolic pathways

217115_at 0.378 5.152 3.637 2.386e-03 0.124 -1.372 LOC100240726 makorin ring finger protein 1 pseudogene 20 -44525707 AL031686 20q13.12   1    
225323_at -0.352 5.917 -3.634 2.399e-03 0.124 -1.377 CC2D1B coiled-coil and C2 domain containing 1B 1 -52588854 AW514783 1p32.3 Hs.591451 6    
212250_at -0.744 7.994 -3.634 2.399e-03 0.124 -1.377 MTDH metadherin 8 98725582 AV700332 8q22.1 Hs.377155 23

negative regulation of transcription from RNA polymerase II promoter

protein binding

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

tight junction

membrane

integral to membrane

cell junction

nuclear membrane

perinuclear region of cytoplasm

NF-kappaB binding

positive regulation of NF-kappaB transcription factor activity

 
203327_at -0.596 8.398 -3.633 2.405e-03 0.124 -1.379 IDE insulin-degrading enzyme 10 -94203579 N22903 10q23-q25 Hs.500546 94

metalloendopeptidase activity

signal transducer activity

ATP binding

extracellular space

soluble fraction

cytoplasm

peroxisome

proteolysis

signal transduction

sex differentiation

peptidase activity

zinc ion binding

bradykinin catabolic process

protein homodimerization activity

metal ion binding

beta-amyloid metabolic process

Alzheimer's disease

1552610_a_at -0.868 6.479 -3.631 2.417e-03 0.125 -1.384 JAK1 Janus kinase 1 1 -65071493 NM_002227 1p32.3-p31.3 Hs.207538 118

nucleotide binding

non-membrane spanning protein tyrosine kinase activity

Janus kinase activity

growth hormone receptor binding

protein binding

ATP binding

nucleus

cytoplasm

cytoskeleton

enzyme linked receptor protein signaling pathway

protein kinase cascade

membrane

transferase activity

peptidyl-tyrosine phosphorylation

cytokine-mediated signaling pathway

response to antibiotic

Jak-STAT signaling pathway

Pathways in cancer

Pancreatic cancer

229840_at 0.372 5.819 3.629 2.425e-03 0.125 -1.387 IQSEC2 IQ motif and Sec7 domain 2 X -53312230, -53278789, -53278782 AW026036 Xp11.22 Hs.496138 10

ARF guanyl-nucleotide exchange factor activity

intracellular

cytoplasm

regulation of ARF protein signal transduction

Endocytosis

238228_at -0.816 4.849 -3.629 2.425e-03 0.125 -1.387 COG3 component of oligomeric golgi complex 3 13 44937071 AI732206 13q14.13 Hs.507948 15

Golgi apparatus

cis-Golgi network

protein amino acid glycosylation

intracellular protein transport

ER to Golgi vesicle-mediated transport

retrograde vesicle-mediated transport, Golgi to ER

intra-Golgi vesicle-mediated transport

protein transporter activity

membrane

Golgi transport complex

protein localization in organelle

protein stabilization

 
212427_at -0.961 7.057 -3.629 2.426e-03 0.125 -1.388 KIAA0368 KIAA0368 9 -113162793 AB002366 9q31.3 Hs.368255 12

proteasome complex

binding

nucleus

early endosome

late endosome

endoplasmic reticulum

ER-Golgi intermediate compartment

trans-Golgi network

centrosome

cytosol

cytoplasmic membrane-bounded vesicle

ER to Golgi transport vesicle

ER-associated protein catabolic process

 
232306_at 0.338 3.172 3.629 2.426e-03 0.125 -1.388 CDH26 cadherin-like 26 20 57966876, 58004823 BG289314 20q13.2-q13.33 Hs.54973 4

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

 
222735_at -0.833 9.485 -3.628 2.427e-03 0.125 -1.388 TMEM38B transmembrane protein 38B 9 107496645 AW452608 9q31.2 Hs.411925 5

potassium channel activity

endoplasmic reticulum

ion transport

potassium ion transport

membrane

integral to membrane

potassium ion binding

nuclear membrane

sarcoplasmic reticulum membrane

 
1558668_s_at 0.647 2.445 3.628 2.431e-03 0.125 -1.389 SPATA22 spermatogenesis associated 22 17 -3290063 AW072392 17p13.3 Hs.351068 3    
230090_at -1.999 5.755 -3.628 2.431e-03 0.125 -1.389 GDNF glial cell derived neurotrophic factor 5 -37851509, -37851509, -37851509 AW296078 5p13.1-p12 Hs.248114 86

neural crest cell migration

extracellular region

anti-apoptosis

signal transduction

nervous system development

growth factor activity

adult locomotory behavior

positive regulation of specific transcription from RNA polymerase II promoter

neuron projection development

positive regulation of monooxygenase activity

positive regulation of dopamine secretion

protein homodimerization activity

negative regulation of neuron apoptosis

mRNA stabilization

regulation of dopamine uptake

 
238864_at 0.427 5.488 3.627 2.436e-03 0.125 -1.391 VWA3A von Willebrand factor A domain containing 3A 16 22011363 AI559649 16p12.2 Hs.10697 4

extracellular region

 
1559705_s_at 0.325 5.647 3.627 2.436e-03 0.125 -1.391 PHKA2 phosphorylase kinase, alpha 2 (liver) X -18820336 X73875 Xp22.2-p22.1 Hs.54941 Hs.607628 Hs.622882 29

catalytic activity

phosphorylase kinase activity

calmodulin binding

plasma membrane

phosphorylase kinase complex

carbohydrate metabolic process

glycogen metabolic process

generation of precursor metabolites and energy

protein modification process

Calcium signaling pathway

Insulin signaling pathway

228930_at -0.721 6.512 -3.627 2.437e-03 0.125 -1.392 SCARNA15 small Cajal body-specific RNA 15 15 81221750 AI679611 15q25.2 Hs.513091 1    
220512_at 0.366 4.901 3.624 2.449e-03 0.125 -1.396 DLC1 deleted in liver cancer 1 8 -13116452, -12985242, -12985242 NM_024767 8p22 Hs.134296 48

neural tube closure

heart morphogenesis

GTPase activator activity

protein binding

intracellular

nucleus

cytoplasm

caveola

focal adhesion

induction of apoptosis

activation of caspase activity

signal transduction

negative regulation of cell proliferation

negative regulation of cell proliferation

regulation of cell shape

hindbrain morphogenesis

negative regulation of cell migration

negative regulation of cell migration

Rac GTPase activator activity

forebrain development

regulation of actin cytoskeleton organization

negative regulation of Rho protein signal transduction

positive regulation of protein amino acid dephosphorylation

SH2 domain binding

focal adhesion formation

negative regulation of stress fiber formation

 
212758_s_at -0.828 8.044 -3.624 2.450e-03 0.125 -1.397 ZEB1 zinc finger E-box binding homeobox 1 10 31647429, 31647717, 31647752, 31648106, 31650069 AI373166 10p11.2 Hs.124503 52

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

transcription coactivator activity

transcription corepressor activity

intracellular

nucleus

immune response

zinc ion binding

cell proliferation

sequence-specific DNA binding

metal ion binding

 
234854_at 0.417 3.278 3.622 2.462e-03 0.125 -1.401 MDN1 MDN1, midasin homolog (yeast) 6 -90409951 AL096678 6q15 Hs.529948 7

nucleotide binding

ATP binding

nucleus

ATPase activity

regulation of protein complex assembly

unfolded protein binding

 
204773_at 0.340 7.128 3.622 2.462e-03 0.125 -1.401 IL11RA interleukin 11 receptor, alpha 9 34642181, 34643931, 34643931 NM_004512 9p13 Hs.591088 26

cytokine receptor activity

integral to plasma membrane

membrane

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

Hematopoietic cell lineage

213929_at 0.604 2.932 3.619 2.476e-03 0.126 -1.406 EXPH5 exophilin 5 11 -107881367, -107881367, -107881367 AL050204 11q22.3 Hs.28540 8

protein binding

intracellular protein transport

Rab GTPase binding

 
226735_at -0.694 7.036 -3.617 2.483e-03 0.126 -1.409 TAPT1 transmembrane anterior posterior transformation 1 4 -15771225 AI239899 4p15.32 Hs.479223 5

receptor activity

multicellular organismal development

membrane

integral to membrane

 
205206_at -1.280 7.950 -3.617 2.484e-03 0.126 -1.409 KAL1 Kallmann syndrome 1 sequence X -8456914 NM_000216 Xp22.32 Hs.521869 35

serine-type endopeptidase inhibitor activity

extracellular matrix structural constituent

protein binding

extracellular region

proteinaceous extracellular matrix

extracellular space

chemotaxis

cell adhesion

axon guidance

cell surface

peptidase inhibitor activity

 
206156_at 0.379 3.596 3.617 2.485e-03 0.126 -1.410 GJB5 gap junction protein, beta 5, 31.1kDa 1 34993307 NM_005268 1p35.1 Hs.198249 5

plasma membrane

connexon complex

cell communication

epidermis development

integral to membrane

cell junction

 
206647_at 0.383 4.149 3.616 2.492e-03 0.126 -1.412 HBZ hemoglobin, zeta 16 142853 NM_005332 16p13.3 Hs.585357 24

oxygen transporter activity

hemoglobin complex

transport

oxygen transport

oxygen binding

heme binding

metal ion binding

 
225324_at -0.835 7.581 -3.615 2.493e-03 0.126 -1.413 CRLS1 cardiolipin synthase 1 20 5934738, 5935897 AL035461 20p13-p12.3 Hs.224764 14

mitochondrion

mitochondrial inner membrane

phospholipid biosynthetic process

membrane

integral to membrane

transferase activity

phosphotransferase activity, for other substituted phosphate groups

Glycerophospholipid metabolism

Metabolic pathways

1556325_at -0.841 8.240 -3.615 2.494e-03 0.126 -1.413 FILIP1 filamin A interacting protein 1 6 -76074519 AL832009 6q14.1 Hs.696158 9    
210426_x_at -0.936 5.791 -3.609 2.526e-03 0.128 -1.424 RORA RAR-related orphan receptor A 15 -58567776, -58567776, -58567776 U04897 15q22.2 Hs.560343 Hs.655155 33

transcription factor activity

steroid hormone receptor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

nitric oxide biosynthetic process

signal transduction

zinc ion binding

cerebellar Purkinje cell differentiation

regulation of macrophage activation

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

cGMP metabolic process

metal ion binding

 
226267_at -0.683 6.423 -3.606 2.541e-03 0.128 -1.430 JDP2 Jun dimerization protein 2 14 74964261, 74964672, 74964812, 74968589 AA716425 14q24.3 Hs.196482 15

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

transcription repressor activity

sequence-specific DNA binding

protein dimerization activity

 
242338_at -0.498 4.707 -3.605 2.549e-03 0.128 -1.433 TMEM64 transmembrane protein 64 8 -91703398 BG535396 8q21.3 Hs.567759 2

membrane

integral to membrane

 
230285_at -0.625 5.014 -3.604 2.553e-03 0.128 -1.434 SVIP small VCP/p97-interacting protein 11 -22800173 BF447829 11p14.2 Hs.349096 4

endoplasmic reticulum

Golgi apparatus

plasma membrane

 
1563290_at 0.386 5.303 3.603 2.556e-03 0.128 -1.435 DNAH3 dynein, axonemal, heavy chain 3 16 -20851976 Z83805 16p12.3 Hs.526500 7

nucleotide binding

ciliary or flagellar motility

microtubule motor activity

ATP binding

axonemal dynein complex

microtubule

cilium

microtubule-based movement

ATPase activity

cilium axoneme

Huntington's disease

1554549_a_at -0.793 3.234 -3.603 2.559e-03 0.128 -1.437 WDR20 WD repeat domain 20 14 101675964, 101675964, 101675964 BC030654 14q32.31 Hs.36859 7    
202978_s_at -0.620 5.295 -3.601 2.570e-03 0.129 -1.440 CREBZF CREB/ATF bZIP transcription factor 11 -85046257 AW204564 11q14 Hs.535319 Hs.595940 Hs.714910 12

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

response to virus

negative regulation of transcription

specific transcriptional repressor activity

sequence-specific DNA binding

negative regulation of gene expression, epigenetic

regulation of transcription factor activity

 
208680_at -0.596 10.706 -3.600 2.572e-03 0.129 -1.441 PRDX1 peroxiredoxin 1 1 -45749293 L19184 1p34.1 Hs.180909 62

skeletal system development

protein binding

nucleus

cytoplasm

mitochondrion

cell proliferation

oxidoreductase activity

melanosome

hydrogen peroxide catabolic process

cell redox homeostasis

peroxiredoxin activity

oxidation reduction

 
209004_s_at 0.504 10.040 3.599 2.579e-03 0.129 -1.444 FBXL5 F-box and leucine-rich repeat protein 5 4 -15215251 AF142481 4p15.32 Hs.643433 13

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

protein ubiquitination

modification-dependent protein catabolic process

 
217725_x_at -0.834 8.721 -3.598 2.584e-03 0.129 -1.445 SERBP1 SERPINE1 mRNA binding protein 1 1 -67646080 NM_015640 1p31 Hs.719078 22

RNA binding

mRNA 3'-UTR binding

protein binding

nucleus

cytoplasm

regulation of mRNA stability

perinuclear region of cytoplasm

 
209657_s_at -0.942 8.384 -3.597 2.590e-03 0.129 -1.448 HSF2 heat shock transcription factor 2 6 122762394 M65217 6q22.31 Hs.158195 28

transcription factor activity

transcription coactivator activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

response to stress

spermatogenesis

protein homodimerization activity

sequence-specific DNA binding

 
211994_at -0.541 9.340 -3.596 2.595e-03 0.129 -1.449 WNK1 WNK lysine deficient protein kinase 1 12 732485 AI742553 12p13.3 Hs.709894 51

nucleotide binding

molecular_function

protein serine/threonine kinase activity

protein kinase inhibitor activity

protein binding

ATP binding

cytoplasm

cytoplasm

protein amino acid phosphorylation

ion transport

protein kinase cascade

biological_process

transferase activity

regulation of cellular process

 
229178_at 0.483 4.428 3.594 2.606e-03 0.129 -1.453 PRTG protogenin homolog (Gallus gallus) 15 -53691041 AV699825 15q21.3 Hs.130957 4

multicellular organismal development

membrane

integral to membrane

 
211744_s_at -0.680 5.471 -3.594 2.609e-03 0.129 -1.454 CD58 CD58 molecule 1 -116862845, -116858679 BC005930 1p13 Hs.34341 38

protein binding

plasma membrane

integral to plasma membrane

cell-cell adhesion

anchored to membrane

Cell adhesion molecules (CAMs)

201764_at 0.553 7.300 3.593 2.612e-03 0.129 -1.455 TMEM106C transmembrane protein 106C 12 46643596 NM_024056 12q13.1 Hs.596726 5

molecular_function

cellular_component

endoplasmic reticulum

biological_process

membrane

integral to membrane

 
203732_at -0.529 5.886 -3.593 2.614e-03 0.129 -1.456 TRIP4 thyroid hormone receptor interactor 4 15 62467072 NM_016213 15q22.31 Hs.500340 9

transcription coactivator activity

nucleus

nucleolus

cytoplasm

transcription from RNA polymerase II promoter

zinc ion binding

ligand-dependent nuclear receptor binding

regulation of transcription

metal ion binding

 
224445_s_at 0.425 7.772 3.593 2.614e-03 0.129 -1.456 ZFYVE21 zinc finger, FYVE domain containing 21 14 103251897 BC005999 14q32.33 Hs.592322 4

zinc ion binding

metal ion binding

 
219751_at -0.634 5.538 -3.591 2.621e-03 0.129 -1.458 SETD6 SET domain containing 6 16 57106883 NM_024860 16q21 Hs.592060 5    
201699_at -0.545 9.470 -3.588 2.636e-03 0.130 -1.464 PSMC6 proteasome (prosome, macropain) 26S subunit, ATPase, 6 14 52243645 NM_002806 14q22.1 Hs.156171 Hs.718586 45

nucleotide binding

proteasome complex

ATP binding

nucleus

cytoplasm

cytosol

ubiquitin-dependent protein catabolic process

hydrolase activity

ATPase activity

protein catabolic process

protein binding, bridging

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

206392_s_at 0.718 3.499 3.588 2.640e-03 0.130 -1.465 RARRES1 retinoic acid receptor responder (tazarotene induced) 1 3 -159905133, -159897590 NM_002888 3q25.32 Hs.131269 11

negative regulation of cell proliferation

membrane

integral to membrane

 
203525_s_at -0.839 7.366 -3.587 2.642e-03 0.130 -1.466 APC adenomatous polyposis coli 5 112071116, 112101454 AI375486 5q21-q22 Hs.158932 386

cytokinesis after mitosis

kinetochore

kidney development

hair follicle development

nucleus

cytoplasm

centrosome

cytosol

cytoplasmic microtubule

protein complex assembly

response to DNA damage stimulus

negative regulation of microtubule depolymerization

cell cycle arrest

mitotic metaphase/anaphase transition

mitotic cell cycle spindle assembly checkpoint

axonogenesis

beta-catenin binding

microtubule binding

axis specification

anterior/posterior pattern formation

dorsal/ventral pattern formation

proximal/distal pattern formation

lateral plasma membrane

protein kinase regulator activity

protein kinase binding

negative regulation of Wnt receptor signaling pathway

positive regulation of cell migration

growth cone

positive regulation of epithelial cell differentiation

beta-catenin destruction complex

positive regulation of microtubule polymerization

cell projection membrane

positive regulation of pseudopodium assembly

T cell differentiation in the thymus

axon part

Axin-APC-beta-catenin-GSK3B complex

somatic stem cell maintenance

negative regulation of odontogenesis

cell projection

positive regulation of apoptosis

negative regulation of apoptosis

negative regulation of MAPKKK cascade

skin development

regulation of osteoblast differentiation

regulation of osteoclast differentiation

positive regulation of protein catabolic process

negative regulation of cyclin-dependent protein kinase activity

positive regulation of cell adhesion

muscle maintenance

thymus development

negative regulation of epithelial cell proliferation

regulation of nitrogen compound metabolic process

chromosome organization

regulation of cell cycle

positive regulation of cell division

regulation of attachment of spindle microtubules to kinetochore

retina development in camera-type eye

Wnt receptor signaling pathway through beta-catenin

Wnt receptor signaling pathway through beta-catenin

Wnt signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Colorectal cancer

Endometrial cancer

Basal cell carcinoma

202057_at -0.694 7.254 -3.587 2.644e-03 0.130 -1.467 KPNA1 karyopherin alpha 1 (importin alpha 5) 3 -123623437 BC002374 3q21 Hs.161008 92

regulation of DNA recombination

protein binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

cytosol

NLS-bearing substrate import into nucleus

intracellular protein transport

nuclear localization sequence binding

protein transporter activity

interspecies interaction between organisms

 
31846_at 0.412 8.470 3.586 2.649e-03 0.130 -1.468 RHOD ras homolog gene family, member D 11 66580864 AW003733 11q14.3 Hs.15114 22

nucleotide binding

GTPase activity

GTP binding

intracellular

plasma membrane

small GTPase mediated signal transduction

Rho protein signal transduction

Axon guidance

217957_at 0.606 8.066 3.585 2.657e-03 0.130 -1.471 C16orf80 chromosome 16 open reading frame 80 16 -56704997 NM_013242 16q21 Hs.532755 3

multicellular organismal development

 
223126_s_at -0.656 7.260 -3.584 2.659e-03 0.130 -1.472 C1orf21 chromosome 1 open reading frame 21 1 182622772 AI159874 1q25 Hs.497159 Hs.719188 8    
226127_at -0.557 7.177 -3.584 2.660e-03 0.130 -1.472 ALKBH3 alkB, alkylation repair homolog 3 (E. coli) 11 43858932 BF062547 11p11.2 Hs.368920 11

damaged DNA binding

iron ion binding

nucleus

nucleoplasm

cytoplasm

mitochondrion

DNA repair

response to DNA damage stimulus

oxidoreductase activity

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

L-ascorbic acid binding

metal ion binding

oxidation reduction

 
222730_s_at -0.667 6.219 -3.584 2.663e-03 0.130 -1.473 ZDHHC2 zinc finger, DHHC-type containing 2 8 17058206 AI814257 8p21.3-p22 Hs.443852 8

zinc ion binding

membrane

integral to membrane

palmitoyltransferase activity

transferase activity

protein palmitoylation

metal ion binding

 
203156_at -0.595 7.454 -3.583 2.664e-03 0.130 -1.473 AKAP11 A kinase (PRKA) anchor protein 11 13 41744288 NM_016248 13q14.11 Hs.105105 14

cytoplasm

centrosome

protein kinase cascade

protein phosphatase 1 binding

protein kinase A binding

 
222657_s_at -0.747 6.919 -3.583 2.667e-03 0.130 -1.474 UBE2W ubiquitin-conjugating enzyme E2W (putative) 8 -74865393 AK024050 8q21.11 Hs.597486 7

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

203693_s_at -0.540 6.387 -3.582 2.673e-03 0.130 -1.476 E2F3 E2F transcription factor 3 6 20510115 NM_001949 6p22 Hs.269408 Hs.703174 48

transcription factor activity

protein binding

nucleus

nucleoplasm

transcription factor complex

regulation of transcription, DNA-dependent

transcription initiation from RNA polymerase II promoter

cell cycle

Cell cycle

Pathways in cancer

Pancreatic cancer

Glioma

Prostate cancer

Melanoma

Bladder cancer

Chronic myeloid leukemia

Small cell lung cancer

Non-small cell lung cancer

225061_at -0.945 9.832 -3.582 2.673e-03 0.130 -1.476 DNAJA4 DnaJ (Hsp40) homolog, subfamily A, member 4 15 76343541, 76344043, 76345614 N45231 15q25.1 Hs.513053 5

protein folding

zinc ion binding

membrane

heat shock protein binding

metal ion binding

unfolded protein binding

 
226682_at -0.879 8.536 -3.581 2.679e-03 0.130 -1.479 RORA RAR-related orphan receptor A 15 -58567776, -58567776, -58567776 AW006185 15q22.2 Hs.560343 Hs.655155 33

transcription factor activity

steroid hormone receptor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

nitric oxide biosynthetic process

signal transduction

zinc ion binding

cerebellar Purkinje cell differentiation

regulation of macrophage activation

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

cGMP metabolic process

metal ion binding

 
225029_at -0.759 6.807 -3.581 2.680e-03 0.130 -1.479 LOC550643 hypothetical LOC550643 X 56772442 BE621082 Xp11.1 Hs.355559 1    
225071_at -0.560 6.013 -3.580 2.684e-03 0.130 -1.480 NUS1 nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) 6 118103309 BG168247 6q22.1 Hs.289008 6

angiogenesis

molecular_function

receptor activity

cellular_component

multicellular organismal development

biological_process

membrane

integral to membrane

transferase activity, transferring alkyl or aryl (other than methyl) groups

cell differentiation

 
218111_s_at -0.638 6.252 -3.580 2.685e-03 0.130 -1.481 CMAS cytidine monophosphate N-acetylneuraminic acid synthetase 12 22090425 NM_018686 12p12.1 Hs.311346 13

nucleus

N-acylneuraminate cytidylyltransferase activity

lipopolysaccharide biosynthetic process

transferase activity

nucleotidyltransferase activity

Amino sugar and nucleotide sugar metabolism

Metabolic pathways

217883_at -0.412 11.057 -3.579 2.688e-03 0.130 -1.482 MMADHC methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria 2 -150134395 NM_015702 2q23.2 Hs.5324 7

mitochondrion

 
219253_at -0.728 5.031 -3.578 2.694e-03 0.130 -1.484 TMEM185B transmembrane protein 185B (pseudogene) 2 -120695323 NM_024121 2q14.2 Hs.376722 5

membrane

integral to membrane

 
218919_at -0.482 7.043 -3.578 2.695e-03 0.130 -1.484 ZFAND1 zinc finger, AN1-type domain 1 8 -82776512 NM_024699 8q21.13 Hs.655453 4

zinc ion binding

metal ion binding

 
212327_at -0.515 9.537 -3.578 2.696e-03 0.130 -1.484 LIMCH1 LIM and calponin homology domains 1 4 41057560, 41309675 AK026815 4p13 Hs.335163 10

actin binding

zinc ion binding

actomyosin structure organization

metal ion binding

 
41577_at 0.595 5.424 3.575 2.711e-03 0.131 -1.490 PPP1R16B protein phosphatase 1, regulatory (inhibitor) subunit 16B 20 36867761 AB020630 20q11.23 Hs.45719 7

plasma membrane

signal transduction

protein phosphatase binding

 
36553_at -0.837 6.751 -3.575 2.713e-03 0.131 -1.490 ASMTL acetylserotonin O-methyltransferase-like X, Y -1482031, -1482031 AA669799 Xp22.3 Yp11.3 Hs.533514 10

cellular_component

cytoplasm

acetylserotonin O-methyltransferase activity

melatonin biosynthetic process

 
230025_at 0.491 5.927 3.573 2.719e-03 0.131 -1.492 GJD3 gap junction protein, delta 3, 31.9kDa 17 -35770430 BF508941 17q21.2 Hs.444663 8

protein binding

plasma membrane

integral to plasma membrane

connexon complex

cell communication

cell surface

gap junction assembly

cell junction

 
217726_at -0.498 7.621 -3.573 2.720e-03 0.131 -1.492 COPZ1 coatomer protein complex, subunit zeta 1 12 53005177 NM_016057 12q13.2-q13.3 Hs.505652 14

protein binding

cytoplasm

Golgi apparatus

cytosol

intracellular protein transport

retrograde vesicle-mediated transport, Golgi to ER

retrograde vesicle-mediated transport, Golgi to ER

intra-Golgi vesicle-mediated transport

intra-Golgi vesicle-mediated transport

membrane

membrane organization

vesicle-mediated transport

membrane coat

COPI vesicle coat

COPI vesicle coat

cytoplasmic vesicle

COPI coating of Golgi vesicle

 
203076_s_at -0.561 7.236 -3.573 2.721e-03 0.131 -1.493 SMAD2 SMAD family member 2 18 -43613464, -43613463, -43613463 U65019 18q21.1 Hs.12253 Hs.705764 206

mesoderm formation

double-stranded DNA binding

transcription factor activity

intracellular

nucleus

nucleoplasm

cytoplasm

cytosol

SMAD protein complex assembly

intracellular signaling cascade

zygotic determination of dorsal/ventral axis

gastrulation

transcription factor binding

anterior/posterior pattern formation

positive regulation of epithelial to mesenchymal transition

promoter binding

transcription activator activity

regulation of transforming growth factor beta receptor signaling pathway

transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity

primary microRNA processing

ubiquitin protein ligase binding

activin responsive factor complex

type I transforming growth factor beta receptor binding

positive regulation of gene-specific transcription

cell fate commitment

negative regulation of transcription, DNA-dependent

positive regulation of transcription from RNA polymerase II promoter

paraxial mesoderm morphogenesis

regulation of binding

palate development

co-SMAD binding

R-SMAD binding

response to cholesterol

Cell cycle

Wnt signaling pathway

TGF-beta signaling pathway

Adherens junction

Pathways in cancer

Colorectal cancer

Pancreatic cancer

223002_s_at -0.379 6.117 -3.567 2.758e-03 0.132 -1.505 XRN2 5'-3' exoribonuclease 2 20 21231941 AL136841 20p11.2-p11.1 Hs.255932 18

DNA catabolic process, exonucleolytic

nucleic acid binding

5'-3' exoribonuclease activity

protein binding

intracellular

nucleus

nucleolus

transcription termination

mRNA processing

RNA catabolic process

spermatogenesis

zinc ion binding

cell growth

hydrolase activity

regulation of transcription

metal ion binding

RNA degradation

221815_at -0.990 5.603 -3.566 2.760e-03 0.132 -1.506 ABHD2 abhydrolase domain containing 2 15 87432384 BE671816 15q26.1 Hs.122337 Hs.705984 10

molecular_function

carboxylesterase activity

biological_process

response to wounding

membrane

integral to membrane

hydrolase activity

negative regulation of cell migration

 
225643_at -0.565 7.374 -3.566 2.764e-03 0.133 -1.507 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1-like 14 54588114 AI261542 14q22.3 Hs.594338 Hs.619374 8    
224477_s_at 0.447 6.507 3.565 2.767e-03 0.133 -1.508 NUDT16L1 nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1 16 4683716 BC006223 16p13.3 Hs.592084 5

cytoplasm

 
203137_at -0.603 8.932 -3.564 2.772e-03 0.133 -1.510 WTAP Wilms tumor 1 associated protein 6 160068141, 160068141, 160068609 NM_004906 6q25-q27 Hs.446091 Hs.710715 16

nucleus

nucleolus

mRNA processing

cell cycle

RNA splicing

nuclear membrane

 
219600_s_at -1.121 6.912 -3.562 2.783e-03 0.133 -1.513 TMEM50B transmembrane protein 50B 21 -33743317 NM_006134 21q22.11 Hs.433668 8

molecular_function

endoplasmic reticulum

plasma membrane

biological_process

integral to membrane

 
222471_s_at -0.672 9.130 -3.562 2.787e-03 0.133 -1.515 KCMF1 potassium channel modulatory factor 1 2 85051741 AI743396 2p11.2 Hs.654968 7

intracellular

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
202058_s_at -1.098 5.315 -3.561 2.789e-03 0.133 -1.516 KPNA1 karyopherin alpha 1 (importin alpha 5) 3 -123623437 BC002374 3q21 Hs.161008 92

regulation of DNA recombination

protein binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

cytosol

NLS-bearing substrate import into nucleus

intracellular protein transport

nuclear localization sequence binding

protein transporter activity

interspecies interaction between organisms

 
224250_s_at -0.661 7.930 -3.560 2.794e-03 0.133 -1.517 SECISBP2 SECIS binding protein 2 9 91123231 BC001189 9q22.2 Hs.59804 20

RNA binding

mRNA 3'-UTR binding

nucleus

translation

 
217955_at -0.514 7.972 -3.560 2.794e-03 0.133 -1.517 BCL2L13 BCL2-like 13 (apoptosis facilitator) 22 16501484 NM_015367 22q11.1 Hs.631672 12

nucleus

mitochondrion

induction of apoptosis

activation of caspase activity

caspase activator activity

membrane

integral to membrane

regulation of apoptosis

 
235030_at -0.650 6.982 -3.560 2.795e-03 0.133 -1.518 FAM55C family with sequence similarity 55, member C 3 102980718, 102980975 BF969254 3q12.3 Hs.595933 4

extracellular region

 
220495_s_at -0.477 7.451 -3.557 2.812e-03 0.133 -1.523 TXNDC15 thioredoxin domain containing 15 5 134237358 NM_024715 5q31.1 Hs.696335 7

membrane

integral to membrane

cell redox homeostasis

 
208998_at 1.140 9.646 3.557 2.814e-03 0.133 -1.524 UCP2 uncoupling protein 2 (mitochondrial, proton carrier) 11 -73363363 U94592 11q13 Hs.80658 153

response to superoxide

binding

mitochondrion

mitochondrial inner membrane

transport

mitochondrial transport

proton transport

membrane

integral to membrane

 
201765_s_at -0.351 7.537 -3.557 2.815e-03 0.133 -1.524 HEXA hexosaminidase A (alpha polypeptide) 15 -70422831 AL523158 15q23-q24 Hs.604479 Hs.709495 93

skeletal system development

hydrolase activity, hydrolyzing O-glycosyl compounds

beta-N-acetylhexosaminidase activity

protein binding

lysosome

carbohydrate metabolic process

ganglioside catabolic process

lysosome organization

sensory perception of sound

locomotory behavior

adult walking behavior

metabolic process

membrane

lipid storage

sexual reproduction

glycosaminoglycan metabolic process

myelination

cation binding

protein heterodimerization activity

neuromuscular process controlling posture

neuromuscular process controlling balance

Other glycan degradation

Amino sugar and nucleotide sugar metabolism

Glycosaminoglycan degradation

Glycosphingolipid biosynthesis - globo series

Glycosphingolipid biosynthesis - ganglio series

Metabolic pathways

Lysosome

218150_at -0.517 9.360 -3.557 2.815e-03 0.133 -1.524 ARL5A ADP-ribosylation factor-like 5A 2 -152365725 NM_012097 2q23.3 Hs.470233 6

nucleotide binding

GTP binding

intracellular

small GTPase mediated signal transduction

 
1554679_a_at -1.974 8.658 -3.556 2.817e-03 0.133 -1.525 LAPTM4B lysosomal protein transmembrane 4 beta 8 98856984 AF317417 8q22.1 Hs.492314 17

transport

endomembrane system

membrane

integral to membrane

Lysosome

210764_s_at -2.045 5.000 -3.556 2.818e-03 0.133 -1.525 CYR61 cysteine-rich, angiogenic inducer, 61 1 85819031 AF003114 1p31-p22 Hs.8867 82

regulation of cell growth

patterning of blood vessels

insulin-like growth factor binding

extracellular region

chemotaxis

cell adhesion

heparin binding

cell proliferation

anatomical structure morphogenesis

positive regulation of cell-substrate adhesion

extracellular matrix organization

extracellular matrix binding

 
1564112_at 0.353 6.060 3.555 2.823e-03 0.133 -1.527 FAM71A family with sequence similarity 71, member A 1 210864438 AK097437 1q32.3 Hs.129293 4    
201987_at -0.451 9.704 -3.555 2.824e-03 0.133 -1.527 MED13 mediator complex subunit 13 17 -57374747 AI984051 17q22-q23 Hs.282678 26

receptor activity

nucleus

transcription initiation from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

ligand-dependent nuclear receptor transcription coactivator activity

androgen receptor signaling pathway

vitamin D receptor binding

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

thyroid hormone receptor binding

 
1552506_at 0.307 3.694 3.555 2.824e-03 0.133 -1.527 CRB2 crumbs homolog 2 (Drosophila) 9 125158268 NM_173689 9q33.3 Hs.710092 7

calcium ion binding

extracellular region

plasma membrane

visual perception

integral to membrane

response to stimulus

 
212128_s_at -0.520 6.317 -3.554 2.831e-03 0.134 -1.529 DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1) 3 49482568 AW411370 3p21 Hs.707131 Hs.76111 56

morphogenesis of an epithelial sheet

calcium ion binding

protein binding

extracellular region

basement membrane

extracellular space

membrane fraction

cytoplasm

integral to plasma membrane

protein complex assembly

muscle contraction

actin cytoskeleton

dystroglycan complex

sarcolemma

membrane raft

ECM-receptor interaction

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

232910_at 0.415 4.339 3.553 2.836e-03 0.134 -1.531 NCRNA00081 non-protein coding RNA 81 10 -112648478, -112648478 AK021501 10q25.2 Hs.232543 Hs.651480 4

cytoplasm

cilium

 
225320_at -0.769 7.973 -3.552 2.844e-03 0.134 -1.533 CCDC109A coiled-coil domain containing 109A 10 74121894 AA579630 10q22.1 Hs.591366 2

membrane

integral to membrane

 
1553634_a_at 0.436 4.011 3.551 2.851e-03 0.134 -1.536 FLJ40852 hypothetical LOC285962 7 -141050606 NM_173677 7q34 Hs.17589 2    
226043_at 0.367 6.571 3.550 2.857e-03 0.134 -1.538 GPSM1 G-protein signaling modulator 1 (AGS3-like, C. elegans) 9 138341752, 138341752, 138367329 AI242661 9q34.3 Hs.239370 14

GTPase activator activity

binding

cytoplasm

endoplasmic reticulum

Golgi apparatus

cytosol

plasma membrane

signal transduction

multicellular organismal development

nervous system development

cell differentiation

 
222222_s_at -0.818 6.876 -3.549 2.858e-03 0.134 -1.538 HOMER3 homer homolog 3 (Drosophila) 19 -18901009, -18901009, -18901009, -18901009, -18901009 AC002985 19p13.11 Hs.10326 16

protein binding

cytoplasm

plasma membrane

protein targeting

metabotropic glutamate receptor signaling pathway

postsynaptic density

cell junction

synapse

postsynaptic membrane

 
224654_at -0.442 8.166 -3.549 2.861e-03 0.134 -1.539 DDX21 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 10 70385897 BG164358 10q21 Hs.223141 Hs.576875 18

nucleotide binding

RNA binding

ATP-dependent RNA helicase activity

helicase activity

protein binding

ATP binding

nucleus

nucleolus

hydrolase activity

 
213581_at -0.819 5.606 -3.548 2.864e-03 0.134 -1.540 PDCD2 programmed cell death 2 6 -170732759, -170728374 BF446180 6q27 Hs.367900 14

DNA binding

protein binding

nucleus

cytoplasm

apoptosis

zinc ion binding

metal ion binding

 
211862_x_at -0.644 7.214 -3.548 2.865e-03 0.134 -1.540 CFLAR CASP8 and FADD-like apoptosis regulator 2 201689060, 201689134, 201691631 AF015451 2q33-q34 Hs.390736 163

cysteine-type endopeptidase activity

protein binding

proteolysis

anti-apoptosis

induction of apoptosis by extracellular signals

regulation of apoptosis

positive regulation of I-kappaB kinase/NF-kappaB cascade

interspecies interaction between organisms

Apoptosis

200804_at -0.554 9.253 -3.548 2.867e-03 0.134 -1.541 TMBIM6 transmembrane BAX inhibitor motif containing 6 12 48421559, 48421858 NM_003217 12q12-q13 Hs.35052 Hs.708025 20

insoluble fraction

nucleus

endoplasmic reticulum

integral to plasma membrane

spermatogenesis

membrane

negative regulation of apoptosis

 
234071_at -0.512 3.755 -3.546 2.879e-03 0.134 -1.545 DEPDC6 DEP domain containing 6 8 120955080 AU147969 8q24.12 Hs.112981 11

protein binding

intracellular

negative regulation of protein kinase activity

intracellular signaling cascade

negative regulation of TOR signaling pathway

regulation of apoptosis

negative regulation of cell size

 
226161_at -0.518 6.323 -3.546 2.880e-03 0.134 -1.545 SLC30A6 solute carrier family 30 (zinc transporter), member 6 2 32244436 BF793552 2p22.3 Hs.23248 7

Golgi apparatus

cation transport

zinc ion transport

zinc ion binding

cation transmembrane transporter activity

membrane

integral to membrane

 
210246_s_at 0.614 5.357 3.545 2.883e-03 0.134 -1.546 ABCC8 ATP-binding cassette, sub-family C (CFTR/MRP), member 8 11 -17371007 AF087138 11p15.1 Hs.54470 111

nucleotide binding

receptor activity

ATP binding

plasma membrane

carbohydrate metabolic process

transport

potassium ion transport

sulfonylurea receptor activity

potassium ion transmembrane transporter activity

integral to membrane

ATPase activity

ATPase activity, coupled to transmembrane movement of substances

ABC transporters

Type II diabetes mellitus

226008_at -0.482 7.262 -3.545 2.883e-03 0.134 -1.546 NDNL2 necdin-like 2 15 -27347649 AA627644 15q13.1 Hs.719283 8

protein binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

regulation of growth

 
202288_at -0.371 5.971 -3.543 2.897e-03 0.135 -1.550 MTOR mechanistic target of rapamycin (serine/threonine kinase) 1 -11089175 U88966 1p36.2 Hs.338207 317

nucleotide binding

protein serine/threonine kinase activity

protein serine/threonine kinase activity

ATP binding

cytoplasm

mitochondrion

mitochondrial outer membrane

endoplasmic reticulum

Golgi apparatus

cytosol

phosphoinositide 3-kinase complex

signal transduction

response to nutrient

endomembrane system

membrane

cell growth

kinase activity

phosphotransferase activity, alcohol group as acceptor

protein catabolic process

TOR signaling pathway

TORC1 complex

TORC2 complex

regulation of actin cytoskeleton organization

response to amino acid stimulus

protein amino acid autophosphorylation

phosphoprotein binding

ErbB signaling pathway

mTOR signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

Type II diabetes mellitus

Pathways in cancer

Glioma

Prostate cancer

Acute myeloid leukemia

1557981_at 0.358 4.118 3.542 2.900e-03 0.135 -1.551 RPS9 ribosomal protein S9 19 59396537 AK095055 19q13.4 Hs.467284 Hs.546288 20

structural constituent of ribosome

protein binding

intracellular

nucleolus

cytoplasm

cytosol

ribosome

translational elongation

positive regulation of cell proliferation

rRNA binding

cytosolic small ribosomal subunit

translation regulator activity

Ribosome

203267_s_at -0.433 6.407 -3.542 2.903e-03 0.135 -1.552 DRG2 developmentally regulated GTP binding protein 2 17 17932007 BF223206 17p11.2 Hs.78582 12

nucleotide binding

GTP binding

intracellular

cytoplasm

signal transduction

 
213251_at -0.580 7.781 -3.540 2.914e-03 0.135 -1.556 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 4 144654065 AV712064 4q31.1-q31.2 Hs.558422 Hs.710623 37

nucleotide binding

condensed chromosome

DNA binding

RNA polymerase II transcription factor activity

helicase activity

ATP binding

nucleus

nucleoplasm

nucleolus

chromatin assembly or disassembly

nucleosome assembly

transcription initiation

regulation of transcription from RNA polymerase II promoter

embryonic development

transcription activator activity

nucleosome positioning

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

ATPase activity

RSF complex

nucleosome binding

histone binding

ATP-dependent chromatin remodeling

 
204524_at -0.354 7.350 -3.539 2.922e-03 0.135 -1.558 PDPK1 3-phosphoinositide dependent protein kinase-1 16 2527970 NM_002613 16p13.3 Hs.459691 103

nucleotide binding

3-phosphoinositide-dependent protein kinase activity

protein binding

ATP binding

cytoplasm

cytosol

plasma membrane

plasma membrane

negative regulation of protein kinase activity

intracellular signaling cascade

transferase activity

peptidyl-threonine phosphorylation

actin cytoskeleton organization

activation of protein kinase B activity

cellular response to insulin stimulus

regulation of establishment of protein localization

PPAR signaling pathway

mTOR signaling pathway

Focal adhesion

Insulin signaling pathway

Endometrial cancer

Prostate cancer

Non-small cell lung cancer

206662_at -0.793 9.632 -3.538 2.925e-03 0.135 -1.559 GLRX glutaredoxin (thioltransferase) 5 -95175308 NM_002064 5q14 Hs.28988 Hs.712696 47

cytoplasm

cytosol

transport

electron carrier activity

protein disulfide oxidoreductase activity

glutathione disulfide oxidoreductase activity

electron transport chain

cell redox homeostasis

protein N-terminus binding

 
231950_at 0.580 4.964 3.538 2.926e-03 0.135 -1.559 ZNF658 zinc finger protein 658 9 -40761401 AW874634 9p13.1 Hs.522147 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
203002_at -0.935 6.784 -3.537 2.931e-03 0.135 -1.561 AMOTL2 angiomotin like 2 3 -135556879 NM_016201 3q21-q22 Hs.426312 Hs.713601 9

tight junction

identical protein binding

 
226713_at -0.413 6.527 -3.535 2.941e-03 0.136 -1.564 CCDC50 coiled-coil domain containing 50 3 192529567 AI247881 3q28 Hs.478682 12

protein binding

cytoplasm

 
209200_at -0.893 10.422 -3.535 2.942e-03 0.136 -1.564 MEF2C myocyte enhancer factor 2C 5 -88049814, -88049814 AL536517 5q14 Hs.653394 56

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription, DNA-dependent

apoptosis

multicellular organismal development

nervous system development

muscle organ development

negative regulation of specific transcription from RNA polymerase II promoter

nuclear speck

cell differentiation

sequence-specific DNA binding

positive regulation of survival gene product expression

MAPK signaling pathway

211456_x_at -0.820 10.327 -3.535 2.943e-03 0.136 -1.565 MT1P2 metallothionein 1 pseudogene 2 1   AF333388 1q43 Hs.632513 1    
222443_s_at -0.549 7.690 -3.534 2.951e-03 0.136 -1.567 RBM8A RNA binding motif protein 8A 1 144218994 AF182415 1q12 Hs.356873 43

nucleotide binding

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

nuclear mRNA splicing, via spliceosome

mRNA binding

protein binding

nucleus

spliceosomal complex

cytoplasm

transport

biological_process

RNA splicing

nuclear speck

exon-exon junction complex

mRNA transport

 
1559315_s_at 0.359 2.890 3.533 2.953e-03 0.136 -1.568 LOC144481 hypothetical protein LOC144481 12   AK054607 12q22 Hs.602278 1    
224834_at -0.581 6.627 -3.532 2.962e-03 0.136 -1.571 UBTD2 ubiquitin domain containing 2 5 -171569254 BF243404 5q35.1 Hs.131570 Hs.716824 7

cytoplasm

 
202272_s_at -0.449 7.031 -3.530 2.972e-03 0.136 -1.574 FBXO28 F-box protein 28 1 222368413 NM_015176 1q42.11 Hs.64691 Hs.713992 10

modification-dependent protein catabolic process

 
238124_at -0.910 8.554 -3.530 2.976e-03 0.136 -1.575 MYOM3 myomesin family, member 3 1 -24255117 AI124053 1p36.11 Hs.523413 4    
214113_s_at -0.656 7.575 -3.529 2.980e-03 0.136 -1.576 RBM8A RNA binding motif protein 8A 1 144218994 AI738479 1q12 Hs.356873 43

nucleotide binding

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

nuclear mRNA splicing, via spliceosome

mRNA binding

protein binding

nucleus

spliceosomal complex

cytoplasm

transport

biological_process

RNA splicing

nuclear speck

exon-exon junction complex

mRNA transport

 
1562689_at 0.402 4.549 3.528 2.984e-03 0.136 -1.578 LOC151484 hypothetical protein LOC151484 2   BC043555 2q37.1 Hs.559309 1    
233517_s_at 0.424 5.630 3.527 2.991e-03 0.136 -1.579 HIF3A hypoxia inducible factor 3, alpha subunit 19 51492144, 51493498, 51498715 AK021421 19q13.32 Hs.420830 12

DNA binding

signal transducer activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

signal transduction

transcription regulator activity

 
209019_s_at -0.525 10.140 -3.527 2.992e-03 0.136 -1.580 PINK1 PTEN induced putative kinase 1 1 20832534 AF316873 1p36 Hs.389171 105

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

ATP binding

mitochondrion

mitochondrial outer membrane

protein amino acid phosphorylation

response to stress

protein kinase cascade

membrane

integral to membrane

transferase activity

positive regulation of synaptic transmission, dopaminergic

positive regulation of dopamine secretion

Parkinson's disease

226140_s_at -2.017 7.548 -3.527 2.994e-03 0.136 -1.581 OTUD1 OTU domain containing 1 10 23768203 AI934347 10p12.2 Hs.499042 4    
235164_at -0.623 6.484 -3.526 3.001e-03 0.136 -1.583 ZNF25 zinc finger protein 25 10 -38278800 BG433539 10p11.1 Hs.499429 8

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
202136_at -0.379 9.463 -3.526 3.002e-03 0.136 -1.583 ZMYND11 zinc finger, MYND domain containing 11 10 170423, 170423 BE250417 10p14 Hs.292265 17

negative regulation of transcription from RNA polymerase II promoter

DNA binding

protein binding

nucleus

cell cycle

zinc ion binding

cell proliferation

regulation of transcription

metal ion binding

 
218084_x_at 0.483 6.036 3.525 3.003e-03 0.136 -1.583 FXYD5 FXYD domain containing ion transport regulator 5 19 40337466 NM_014164 19q12-q13.1 Hs.333418 20

actin binding

ion channel activity

ion transport

membrane

integral to membrane

microvillus assembly

cadherin binding

negative regulation of calcium-dependent cell-cell adhesion

 
1556736_at 0.357 4.380 3.525 3.004e-03 0.136 -1.583 LOC100129858 hypothetical protein LOC100129858 4   AK095554 4q31.1 Hs.660477 1    
205589_at 0.533 12.188 3.525 3.007e-03 0.136 -1.584 MYL3 myosin, light chain 3, alkali; ventricular, skeletal, slow 3 -46874360 NM_000258 3p21.3-p21.2 Hs.517939 27

regulation of the force of heart contraction

motor activity

actin monomer binding

calcium ion binding

muscle myosin complex

regulation of striated muscle contraction

structural constituent of muscle

myosin complex

A band

I band

myosin II heavy chain binding

positive regulation of ATPase activity

ventricular cardiac muscle morphogenesis

cardiac muscle contraction

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

204528_s_at -0.557 8.114 -3.524 3.012e-03 0.137 -1.586 NAP1L1 nucleosome assembly protein 1-like 1 12 -74724938 NM_004537 12q21.2 Hs.524599 Hs.695185 17

protein binding

nucleus

chromatin assembly complex

DNA replication

nucleosome assembly

positive regulation of cell proliferation

melanosome

 
210611_s_at -0.851 6.975 -3.523 3.019e-03 0.137 -1.588 DTNA dystrobrevin, alpha 18 30327251, 30327251, 30327251, 30427279, 30544193, 30589937, 30589937, 30652299, 30652299 U26744 18q12 Hs.643454 38

calcium ion binding

protein binding

cytoplasm

striated muscle contraction

signal transduction

neuromuscular synaptic transmission

zinc ion binding

cell junction

synapse

 
236866_at 0.476 4.787 3.523 3.020e-03 0.137 -1.588 GALNS galactosamine (N-acetyl)-6-sulfate sulfatase 16 -87407642 AA884446 16q24.3 Hs.271383 39

N-acetylgalactosamine-4-sulfatase activity

calcium ion binding

lysosome

metabolic process

hydrolase activity

glycosaminoglycan metabolic process

N-acetylgalactosamine-6-sulfatase activity

Glycosaminoglycan degradation

Metabolic pathways

Lysosome

1553425_at 0.360 4.901 3.522 3.022e-03 0.137 -1.589 WDR65 WD repeat domain 65 1 43410612 NM_152498 1p34.2 Hs.647644 6

membrane

integral to membrane

 
217978_s_at -0.396 7.870 -3.521 3.029e-03 0.137 -1.591 UBE2Q1 ubiquitin-conjugating enzyme E2Q family member 1 1 -152787674 NM_017582 1q21.3 Hs.607928 7

nucleotide binding

ubiquitin-protein ligase activity

protein binding

ATP binding

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

204745_x_at -0.709 8.513 -3.521 3.030e-03 0.137 -1.591 MT1G metallothionein 1G 16 -55258153 NM_005950 16q13 Hs.433391 17

copper ion binding

protein binding

zinc ion binding

cadmium ion binding

metal ion binding

 
205389_s_at 0.704 9.476 3.518 3.046e-03 0.137 -1.596 ANK1 ankyrin 1, erythrocytic 8 -41629901, -41629901, -41629900 AI659683 8p11.1 Hs.654438 Hs.667377 49

structural constituent of cytoskeleton

cytoplasm

plasma membrane

exocytosis

cytoskeleton organization

signal transduction

cytoskeletal adaptor activity

spectrin-associated cytoskeleton

basolateral plasma membrane

sarcoplasmic reticulum

enzyme binding

spectrin binding

M band

maintenance of epithelial cell apical/basal polarity

 
214515_at 0.411 4.024 3.518 3.047e-03 0.137 -1.596 OR1E1 olfactory receptor, family 1, subfamily E, member 1 17 -3247509 NM_003553 17p13.3 Hs.278485 7

receptor activity

olfactory receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

sensory perception of smell

integral to membrane

response to stimulus

Olfactory transduction

209653_at -0.899 5.423 -3.518 3.051e-03 0.137 -1.598 KPNA4 karyopherin alpha 4 (importin alpha 3) 3 -161700655 U93240 3q25.33 Hs.715552 53

protein binding

nucleus

nuclear pore

cytoplasm

NLS-bearing substrate import into nucleus

intracellular protein transport

protein transporter activity

 
214073_at -0.811 5.353 -3.517 3.052e-03 0.137 -1.598 CTTN cortactin 11 69922259, 69922291 BG475299 11q13 Hs.596164 106

ruffle

protein binding

soluble fraction

cytoplasm

cytoskeleton

cell cortex

lamellipodium

Tight junction

Pathogenic Escherichia coli infection - EHEC

1554168_a_at 1.101 7.854 3.517 3.056e-03 0.137 -1.599 SH3KBP1 SH3-domain kinase binding protein 1 X -19462003, -19462003 AF542051 Xp22.1-p21.3 Hs.719268 58

molecular_function

protein binding

nucleus

nucleolus

cytoplasm

cytosol

cytoskeleton

plasma membrane

focal adhesion

endocytosis

apoptosis

cell-cell signaling

SH3 domain binding

synaptosome

cell junction

cytoplasmic vesicle

synapse

Endocytosis

226603_at -0.727 5.327 -3.514 3.077e-03 0.138 -1.606 SAMD9L sterile alpha motif domain containing 9-like 7 -92597303 BE966604 7q21.2 Hs.489118 4    
222287_at -0.763 11.343 -3.513 3.080e-03 0.138 -1.606 TRDN triadin 6 -123579181 AW969675 6q22-q23 Hs.654601 19

receptor binding

cytoplasm

plasma membrane

muscle contraction

integral to membrane

sarcoplasmic reticulum

 
219565_at -0.509 5.331 -3.512 3.088e-03 0.138 -1.609 CYP20A1 cytochrome P450, family 20, subfamily A, polypeptide 1 2 203811408 NM_020674 2q33.2 Hs.446065 Hs.707756 7

monooxygenase activity

electron carrier activity

membrane

integral to membrane

heme binding

metal ion binding

oxidation reduction

 
203149_at -0.408 5.774 -3.511 3.096e-03 0.138 -1.611 PVRL2 poliovirus receptor-related 2 (herpesvirus entry mediator B) 19 50041232, 50041232 NM_002856 19q13.2 Hs.655455 38

positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target

positive regulation of immunoglobulin mediated immune response

plasma membrane

cell-cell junction

zonula adherens

cell adhesion

homophilic cell adhesion

spermatid development

cell surface

coreceptor activity

integral to membrane

viral envelope fusion with host membrane

positive regulation of mast cell activation

susceptibility to natural killer cell mediated cytotoxicity

virion attachment, binding of host cell surface coreceptor

cell adhesion molecule binding

adhesion to symbiont

susceptibility to T cell mediated cytotoxicity

Cell adhesion molecules (CAMs)

Adherens junction

1552791_a_at -1.681 9.065 -3.511 3.097e-03 0.138 -1.611 TRDN triadin 6 -123579181 NM_006073 6q22-q23 Hs.654601 19

receptor binding

cytoplasm

plasma membrane

muscle contraction

integral to membrane

sarcoplasmic reticulum

 
244741_s_at 1.482 6.388 3.510 3.097e-03 0.138 -1.612 MGC9913 hypothetical protein MGC9913 19   BE855713 19q13.43 Hs.23133 1    
223429_x_at -0.418 6.937 -3.510 3.102e-03 0.138 -1.613 ISY1 ISY1 splicing factor homolog (S. cerevisiae) 3 -130330924 BC004122 3q21.3 Hs.512661 7

nucleus

spliceosomal complex

nucleolus

cytoplasm

mRNA processing

RNA splicing

 
222725_s_at -0.828 7.474 -3.510 3.103e-03 0.138 -1.613 PALMD palmdelphin 1 99884018 AI082747 1p22-p21 Hs.483993 7

cytoplasm

regulation of cell shape

membrane

 
218368_s_at -1.078 7.033 -3.509 3.106e-03 0.139 -1.614 TNFRSF12A tumor necrosis factor receptor superfamily, member 12A 16 3010313 NM_016639 16p13.3 Hs.355899 25

angiogenesis

ruffle

receptor activity

protein binding

plasma membrane

apoptosis

cell motion

substrate-bound cell migration, cell attachment to substrate

cell adhesion

multicellular organismal development

cell death

cell surface

integral to membrane

cell differentiation

positive regulation of axon extension

Cytokine-cytokine receptor interaction

1554114_s_at -0.742 4.607 -3.508 3.113e-03 0.139 -1.616 SSH2 slingshot homolog 2 (Drosophila) 17 -24977090 AB072359 17q11.2 Hs.654754 11

actin binding

protein tyrosine phosphatase activity

cytoplasm

cytoskeleton

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

actin cytoskeleton organization

Regulation of actin cytoskeleton

236320_at 0.426 3.883 3.507 3.120e-03 0.139 -1.618 CCDC17 coiled-coil domain containing 17 1 -45858302 AA010540 1p34.1 Hs.18912 3    
210993_s_at -0.586 7.248 -3.505 3.130e-03 0.139 -1.621 SMAD1 SMAD family member 1 4 146622400, 146623406 U54826 4q31 Hs.604588 118

MAPKKK cascade

mesodermal cell fate commitment

osteoblast fate commitment

transcription factor activity

RNA polymerase II transcription factor activity

receptor signaling protein activity

intracellular

nucleus

nucleoplasm

transcription factor complex

cytoplasm

cytosol

inflammatory response

signal transduction

transforming growth factor beta receptor signaling pathway

SMAD protein complex assembly

gamete generation

negative regulation of cell proliferation

embryonic pattern specification

positive regulation of gene expression

integral to membrane

transcription activator activity

BMP signaling pathway

BMP signaling pathway

transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity

midbrain development

hindbrain development

primary microRNA processing

homeostatic process

identical protein binding

positive regulation of osteoblast differentiation

positive regulation of transcription from RNA polymerase II promoter

co-SMAD binding

TGF-beta signaling pathway

223615_at 0.414 6.230 3.505 3.135e-03 0.139 -1.623 ABI3 ABI family, member 3 17 44642587 AL136709 17q21.3 Hs.130719 12

protein binding

intracellular

cytoplasm

cell motion

peptidyl-tyrosine phosphorylation

lamellipodium

regulation of cell migration

 
203100_s_at -0.703 5.704 -3.504 3.136e-03 0.139 -1.623 CDYL chromodomain protein, Y-like 6 4651391, 4721678, 4781330, 4835224 NM_004824 6p25.1 Hs.269092 8

chromatin

chromatin binding

histone acetyltransferase activity

nucleus

chromatin assembly or disassembly

spermatogenesis

metabolic process

acyltransferase activity

transferase activity

regulation of transcription

 
238615_at 0.317 2.866 3.504 3.137e-03 0.139 -1.623 ERLIN2 ER lipid raft associated 2 8 37713254, 37713254, 37713356 AI817403 8p11.2 Hs.705490 13

molecular_function

cytoplasm

endoplasmic reticulum

endoplasmic reticulum membrane

biological_process

membrane

integral to membrane

 
228871_at 0.310 4.140 3.504 3.139e-03 0.139 -1.624 ALG14 asparagine-linked glycosylation 14 homolog (S. cerevisiae) 1 -95220866 AI652839 1p21.3 Hs.408927 5

endoplasmic reticulum

membrane

integral to membrane

N-Glycan biosynthesis

Metabolic pathways

238727_at -0.734 3.259 -3.503 3.146e-03 0.139 -1.626 LOC440934 hypothetical LOC440934 2   AA031832 2q36.1 Hs.715764 1    
209105_at -0.726 5.994 -3.502 3.150e-03 0.139 -1.627 NCOA1 nuclear receptor coactivator 1 2 24660849 AI672428 2p23 Hs.596314 123

DNA binding

chromatin binding

transcription coactivator activity

histone acetyltransferase activity

signal transducer activity

nucleus

signal transduction

acyltransferase activity

transferase activity

androgen receptor signaling pathway

transcription regulator activity

nuclear hormone receptor binding

positive regulation of transcription from RNA polymerase II promoter

protein N-terminus binding

androgen receptor binding

 
212131_at -0.771 8.418 -3.501 3.160e-03 0.140 -1.630 LSM14A LSM14A, SCD6 homolog A (S. cerevisiae) 19 39355191 BG054966 19q13.11 Hs.718430 6    
201075_s_at -0.557 5.226 -3.499 3.172e-03 0.140 -1.633 SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 3 -47602381 NM_003074 3p23-p21 Hs.476179 39

chromatin

DNA binding

chromatin binding

transcription coactivator activity

intracellular

nucleus

nucleoplasm

chromatin assembly or disassembly

chromatin remodeling

regulation of transcription from RNA polymerase II promoter

protein C-terminus binding

organ morphogenesis

SWI/SNF complex

regulation of transcription

positive regulation of transcription, DNA-dependent

protein N-terminus binding

 
202154_x_at -0.633 7.366 -3.499 3.173e-03 0.140 -1.634 TUBB3 tubulin, beta 3 16 88517245 NM_006086 16q24.3 Hs.511743 41

nucleotide binding

GTPase activity

structural molecule activity

GTP binding

intracellular

microtubule

microtubule-based movement

mitosis

neuron differentiation

axon

protein complex

protein polymerization

Gap junction

Pathogenic Escherichia coli infection - EHEC

219366_at -0.797 6.794 -3.498 3.176e-03 0.140 -1.635 AVEN apoptosis, caspase activation inhibitor 15 -31945719 NM_020371 15q13.1 Hs.555966 10

protein binding

intracellular

membrane fraction

apoptosis

anti-apoptosis

membrane

 
237515_at -1.642 6.341 -3.497 3.181e-03 0.140 -1.636 TMEM56 transmembrane protein 56 1 95355481 AA054642 1p21.3 Hs.483512 3

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
228155_at 1.079 9.301 3.495 3.196e-03 0.141 -1.640 C10orf58 chromosome 10 open reading frame 58 10 82158221, 82163570 BF512388 10q23.1 Hs.500333 Hs.718589 10

extracellular region

 
229963_at 0.555 3.927 3.495 3.199e-03 0.141 -1.641 BEX5 brain expressed, X-linked 5 X -101295335, -101295335 AV726956 Xq22.1 Hs.47209 5

cytoplasm

 
1564490_at 0.379 4.663 3.494 3.205e-03 0.141 -1.643 LOC100128830 hypothetical protein LOC100128830 10   AK097584 10q26.3 Hs.638406 1    
225919_s_at -0.515 5.703 -3.494 3.207e-03 0.141 -1.644 C9orf72 chromosome 9 open reading frame 72 9 -27550498, -27536543 AI832598 9p21.2 Hs.493639 4    
201297_s_at -0.742 5.545 -3.493 3.212e-03 0.141 -1.645 MOBKL1B MOB1, Mps One Binder kinase activator-like 1B (yeast) 2 -74236718 AK023321 2p13.1 Hs.196437 12

protein binding

zinc ion binding

metal ion binding

 
215016_x_at -0.371 10.701 -3.492 3.216e-03 0.141 -1.646 DST dystonin 6 -56587338, -56576527, -56430743, -56430743, -56430743, -56430743, -56430743 BC004912 6p12.1 Hs.631992 Hs.669931 48

actin binding

integrin binding

calcium ion binding

protein binding

protein binding

basement membrane

cytoplasm

cytoplasm

cytoskeleton

cell cycle arrest

cell adhesion

integrin-mediated signaling pathway

protein C-terminus binding

cytoplasmic membrane-bounded vesicle

actin cytoskeleton organization

hemidesmosome

intermediate filament cytoskeleton organization

intermediate filament cytoskeleton organization

intermediate filament cytoskeleton organization

actin filament binding

 
1567214_a_at -0.576 6.760 -3.492 3.217e-03 0.141 -1.646 PNN pinin, desmosome associated protein 14 38714137 U59479 14q21.1 Hs.409965 30

DNA binding

structural molecule activity

protein binding

nucleus

spliceosomal complex

nucleolus

cytoplasm

intermediate filament

plasma membrane

mRNA processing

cell adhesion

RNA splicing

nuclear speck

desmosome

regulation of transcription

 
208786_s_at -0.723 9.127 -3.492 3.220e-03 0.141 -1.647 MAP1LC3B microtubule-associated protein 1 light chain 3 beta 16 85983301 AF183417 16q24.2 Hs.356061 22

protein binding

intracellular

cytoplasm

autophagic vacuole

microtubule

autophagy

modification-dependent protein catabolic process

organelle membrane

cytoplasmic vesicle

 
200794_x_at -0.755 9.386 -3.491 3.227e-03 0.141 -1.649 DAZAP2 DAZ associated protein 2 12 49918774, 49918774 NM_014764 12q12 Hs.369761 15

protein binding

WW domain binding

 
225378_at -0.859 6.877 -3.489 3.235e-03 0.141 -1.651 VPS37A vacuolar protein sorting 37 homolog A (S. cerevisiae) 8 17148771 AI866426 8p22 Hs.343873 Hs.512464 8

nucleus

endosome

protein transport

membrane

Endocytosis

202577_s_at -0.571 6.353 -3.489 3.236e-03 0.141 -1.652 DDX19A DEAD (Asp-Glu-Ala-As) box polypeptide 19A 16 68938324 BC005162 16q22.1 Hs.656037 5

nucleotide binding

RNA binding

helicase activity

ATP binding

nucleus

nuclear pore

cytoplasm

ATP-dependent helicase activity

protein transport

membrane

hydrolase activity

mRNA transport

intracellular protein transmembrane transport

 
210711_at 0.342 4.589 3.489 3.236e-03 0.141 -1.652 C1orf217 chromosome 1 open reading frame 217 1   BC000988 1q32.1 Hs.661178 1    
229044_at 0.411 5.806 3.489 3.238e-03 0.141 -1.652 NUDT17 nudix (nucleoside diphosphate linked moiety X)-type motif 17 1 -144297851 AA284522 1q21.1 Hs.585066 4

magnesium ion binding

mitochondrion

hydrolase activity

manganese ion binding

 
218092_s_at -0.563 5.228 -3.489 3.240e-03 0.141 -1.653 AGFG1 ArfGAP with FG repeats 1 2 228045131 NM_004504 2q36.3 Hs.352962 29

DNA binding

RNA binding

protein binding

nucleus

nuclear pore

Golgi apparatus

mRNA export from nucleus

transport

multicellular organismal development

spermatogenesis

ARF GTPase activator activity

zinc ion binding

cell differentiation

cytoplasmic vesicle

regulation of ARF GTPase activity

metal ion binding

 
226060_at -0.487 4.822 -3.487 3.250e-03 0.141 -1.656 RFT1 RFT1 homolog (S. cerevisiae) 3 -53097542 BF475369 3p21.1 Hs.631910 3

lipid transporter activity

lipid transport

carbohydrate transport

membrane

integral to membrane

N-Glycan biosynthesis

210285_x_at -0.497 7.560 -3.487 3.250e-03 0.141 -1.656 WTAP Wilms tumor 1 associated protein 6 160068141, 160068141, 160068609 BC000383 6q25-q27 Hs.446091 Hs.710715 16

nucleus

nucleolus

mRNA processing

cell cycle

RNA splicing

nuclear membrane

 
219643_at -2.569 5.193 -3.487 3.251e-03 0.141 -1.656 LRP1B low density lipoprotein-related protein 1B (deleted in tumors) 2 -140705465 NM_018557 2q21.2 Hs.656461 14

receptor activity

low-density lipoprotein receptor activity

calcium ion binding

protein binding

membrane fraction

receptor-mediated endocytosis

protein transport

membrane

integral to membrane

 
218078_s_at -0.554 6.491 -3.484 3.269e-03 0.142 -1.661 ZDHHC3 zinc finger, DHHC-type containing 3 3 -44931757 NM_016598 3p21.31 Hs.61430 8

Golgi apparatus

zinc ion binding

acyltransferase activity

membrane

integral to membrane

transferase activity

metal ion binding

 
218729_at 0.744 6.757 3.482 3.286e-03 0.142 -1.666 LXN latexin 3 -159866896 NM_020169 3q25.32 Hs.478067 5

enzyme inhibitor activity

protein binding

cytoplasm

metalloendopeptidase inhibitor activity

detection of temperature stimulus involved in sensory perception of pain

 
208136_s_at 0.414 5.683 3.482 3.287e-03 0.142 -1.666 MGC3771 hypothetical LOC81854 16 -3100462 NM_030970 16p13.3 Hs.669490 1    
224697_at -0.436 5.988 -3.479 3.307e-03 0.142 -1.672 DCAF5 DDB1 and CUL4 associated factor 5 14 -68587390 AI568478 14q23-q24.1 Hs.509780 6    
201993_x_at -0.410 8.794 -3.478 3.309e-03 0.142 -1.672 HNRPDL heterogeneous nuclear ribonucleoprotein D-like 4 -83563370 NM_005463 4q13-q21 Hs.527105 14

nucleotide binding

DNA binding

double-stranded DNA binding

single-stranded DNA binding

RNA binding

protein binding

nucleus

cytoplasm

RNA processing

poly(A) RNA binding

heterogeneous nuclear ribonucleoprotein complex

regulation of transcription

 
1557227_s_at -0.414 3.072 -3.477 3.317e-03 0.143 -1.674 TPR translocated promoter region (to activated MET oncogene) 1 -184547408 AW235355 1q25 Hs.279640 30

nucleotide binding

kinetochore

serine-tRNA ligase activity

protein binding

ATP binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

translation

seryl-tRNA aminoacylation

protein import into nucleus

mitotic cell cycle spindle assembly checkpoint

protein transport

membrane

mRNA transport

intracellular protein transmembrane transport

Pathways in cancer

Thyroid cancer

220238_s_at -0.459 3.260 -3.477 3.319e-03 0.143 -1.675 KLHL7 kelch-like 7 (Drosophila) 7 23111877 NM_018846 7p15.3 Hs.654817 9

protein binding

nucleus

nucleolus

 
212771_at -0.929 6.405 -3.477 3.320e-03 0.143 -1.675 FAM171A1 family with sequence similarity 171, member A1 10 -15293649 AU150943 10p13 Hs.66762 4

membrane

integral to membrane

 
237145_at -0.427 2.934 -3.476 3.328e-03 0.143 -1.677 EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 15 38013638 AI953362 15q15.1 Hs.656673 10

nucleotide binding

eukaryotic translation initiation factor 2alpha kinase activity

aminoacyl-tRNA ligase activity

protein binding

ATP binding

intracellular

cytoplasm

tRNA aminoacylation for protein translation

regulation of translational initiation

protein amino acid phosphorylation

transferase activity

cytosolic ribosome

 
205595_at 0.379 5.158 3.474 3.336e-03 0.143 -1.680 DSG3 desmoglein 3 (pemphigus vulgaris antigen) 18 27281729 NM_001944 18q12.1-q12.2 Hs.1925 51

calcium ion binding

protein binding

cytosol

plasma membrane

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

cell junction

desmosome

 
205694_at -2.076 6.660 -3.473 3.347e-03 0.143 -1.683 TYRP1 tyrosinase-related protein 1 9 12683385 NM_000550 9p23 Hs.270279 49

copper ion binding

protein binding

membrane

integral to membrane

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen

melanocyte differentiation

melanosome organization

melanosome membrane

melanin biosynthetic process

protein homodimerization activity

acetoacetic acid metabolic process

pigmentation

metal ion binding

protein heterodimerization activity

oxidation reduction

Tyrosine metabolism

Metabolic pathways

Melanogenesis

217591_at -0.867 5.835 -3.472 3.355e-03 0.144 -1.685 SKIL SKI-like oncogene 3 171558166, 171560104 BF725121 3q26 Hs.581632 34

nucleotide binding

transcription corepressor activity

transforming growth factor beta receptor, cytoplasmic mediator activity

protein binding

nucleus

transcription from RNA polymerase II promoter

signal transduction

multicellular organismal development

 
227123_at 0.392 3.818 3.472 3.355e-03 0.144 -1.685 RAB3B RAB3B, member RAS oncogene family 1 -52157422 AU156710 1p32-p31 Hs.123072 15

nucleotide binding

GTPase activity

protein binding

GTP binding

plasma membrane

small GTPase mediated signal transduction

synaptic vesicle

protein transport

regulation of exocytosis

peptidyl-cysteine methylation

Tight junction

206254_at -1.216 7.646 -3.471 3.360e-03 0.144 -1.686 EGF epidermal growth factor (beta-urogastrone) 4 111053488 NM_001963 4q25 Hs.419815 289

activation of MAPKK activity

angiogenesis

epidermal growth factor receptor binding

calcium ion binding

protein binding

extracellular region

extracellular space

plasma membrane

DNA replication

signal transduction

epidermal growth factor receptor signaling pathway

growth factor activity

integral to membrane

positive regulation of granule cell precursor proliferation

transmembrane receptor protein tyrosine kinase activator activity

platelet alpha granule lumen

positive regulation of phosphorylation

positive regulation of MAP kinase activity

positive regulation of epidermal growth factor receptor activity

positive regulation of mitosis

branching morphogenesis of a tube

regulation of protein secretion

regulation of peptidyl-tyrosine phosphorylation

negative regulation of secretion

MAPK signaling pathway

ErbB signaling pathway

Cytokine-cytokine receptor interaction

Endocytosis

Focal adhesion

Gap junction

Regulation of actin cytoskeleton

Pathways in cancer

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Bladder cancer

Non-small cell lung cancer

1555487_a_at -0.327 5.670 -3.471 3.360e-03 0.144 -1.686 ACTR3B ARP3 actin-related protein 3 homolog B (yeast) 7 152087783 BC015207 7q36.1 Hs.647117 8

nucleotide binding

actin binding

protein binding

ATP binding

cytoplasm

cytoskeleton

regulation of actin filament polymerization

cell projection

 
1558093_s_at -0.856 5.991 -3.470 3.364e-03 0.144 -1.687 MATR3 matrin 3 5 138637690, 138657253 BI832461 5q31.2 Hs.268939 24

nucleotide binding

RNA binding

structural molecule activity

protein binding

intracellular

nucleus

nuclear inner membrane

zinc ion binding

nuclear matrix

metal ion binding

 
223466_x_at -0.653 6.617 -3.469 3.371e-03 0.144 -1.689 COL4A3BP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein 5 -74702683, -74702683 BC000102 5q13.3 Hs.270437 26

protein kinase activity

protein binding

cellular_component

cytoplasm

endoplasmic reticulum

Golgi apparatus

protein amino acid phosphorylation

lipid transport

immune response

 
201544_x_at -0.398 9.087 -3.469 3.372e-03 0.144 -1.690 PABPN1 poly(A) binding protein, nuclear 1 14 22859236 BF675004 14q11.2-q13 Hs.707712 42

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

nucleoplasm

nucleolus

cytoplasm

muscle contraction

poly(A)+ mRNA export from nucleus

 
210140_at 0.423 5.489 3.468 3.383e-03 0.144 -1.692 CST7 cystatin F (leukocystatin) 20 24877865 AF031824 20p11.21 Hs.143212 17

cysteine-type endopeptidase inhibitor activity

extracellular region

cytoplasm

immune response

 
236613_at -0.638 4.330 -3.465 3.401e-03 0.144 -1.697 RBM25 RNA binding motif protein 25 14 72594973 BE466195 14q24.3 Hs.531106 13

nucleotide binding

nuclear mRNA splicing, via spliceosome

nucleic acid binding

mRNA binding

cellular_component

nucleus

cytoplasm

nuclear speck

 
217834_s_at -0.651 6.533 -3.464 3.407e-03 0.144 -1.699 SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 6 -86380411, -86380411, -86374221, -86374221, -86374221, -86374221 NM_006372 6q14-q15 Hs.571177 33

nucleotide binding

RNA binding

protein binding

nucleus

nucleoplasm

spliceosomal complex

cytoplasm

endoplasmic reticulum

microsome

mRNA processing

poly(A) RNA binding

RNA splicing

interspecies interaction between organisms

 
235634_at 0.435 5.179 3.464 3.407e-03 0.144 -1.699 PURG purine-rich element binding protein G 8 -31007898, -30972862 BE503391 8p11 Hs.373778 3

DNA binding

nucleus

 
221066_at 0.347 3.359 3.464 3.410e-03 0.144 -1.700 RXFP3 relaxin/insulin-like family peptide receptor 3 5 33972247 NM_016568 5p15.1-p14 Hs.170146 11

receptor activity

N-formyl peptide receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

elevation of cytosolic calcium ion concentration during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)

 
208842_s_at -0.417 7.657 -3.463 3.416e-03 0.144 -1.701 GORASP2 golgi reassembly stacking protein 2, 55kDa 2 171493956 W93787 2q31.1-q31.2 Hs.431317 16

protein binding

Golgi apparatus

Golgi medial cisterna

Golgi organization

membrane

 
35147_at 0.570 6.873 3.463 3.416e-03 0.144 -1.701 MCF2L MCF.2 cell line derived transforming sequence-like 13 112670757, 112681655 AB002360 13q34 Hs.170422 Hs.597691 15

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

intracellular

cytoplasm

mitochondrion

plasma membrane

intracellular signaling cascade

regulation of Rho protein signal transduction

 
218154_at 0.370 6.445 3.462 3.422e-03 0.144 -1.703 GSDMD gasdermin D 8 144711634 NM_024736 8q24.3 Hs.118983 8

cellular response to extracellular stimulus

 
208579_x_at -0.552 5.642 -3.462 3.424e-03 0.144 -1.703 H2BFS H2B histone family, member S 21   NM_017445 21q22.3 Hs.473961 17

nucleosome

DNA binding

nucleus

chromosome

nucleosome assembly

defense response to bacterium

 
204407_at -0.998 3.787 -3.462 3.426e-03 0.144 -1.704 TTF2 transcription termination factor, RNA polymerase II 1 117404471 AF080255 1p22 Hs.486818 12

nucleotide binding

DNA binding

RNA polymerase II transcription termination factor activity

helicase activity

ATP binding

nucleus

spliceosomal complex

cytoplasm

transcription termination

mRNA processing

transcription elongation factor complex

ATP-dependent helicase activity

DNA-dependent ATPase activity

zinc ion binding

RNA splicing

hydrolase activity

regulation of transcription

 
201133_s_at -0.646 8.032 -3.461 3.433e-03 0.145 -1.706 PJA2 praja ring finger 2 5 -108698308 AA142966 5q21.3 Hs.483036 Hs.592564 10

protein binding

cytoplasm

endoplasmic reticulum

Golgi apparatus

plasma membrane

zinc ion binding

postsynaptic density

ligase activity

modification-dependent protein catabolic process

cell junction

synapse

postsynaptic membrane

metal ion binding

 
218270_at 0.441 9.273 3.460 3.435e-03 0.145 -1.706 MRPL24 mitochondrial ribosomal protein L24 1 -154973717 NM_024540 1q21-q22 Hs.418233 9

structural constituent of ribosome

intracellular

mitochondrion

ribosome

translation

 
211954_s_at -0.383 9.184 -3.459 3.444e-03 0.145 -1.709 IPO5 importin 5 13 97403929 BC000947 13q32.2 Hs.712598 53

protein import into nucleus, docking

GTPase inhibitor activity

protein binding

nucleus

nuclear pore

nucleolus

cytoplasm

NLS-bearing substrate import into nucleus

intracellular protein transport

Ran GTPase binding

protein transporter activity

interspecies interaction between organisms

 
201376_s_at -0.436 6.523 -3.459 3.444e-03 0.145 -1.709 HNRNPF heterogeneous nuclear ribonucleoprotein F 10 -43201070, -43201070, -43201070, -43201070, -43201070, -43201070 AI591354 10q11.21-q11.22 Hs.712955 Hs.808 30

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

nucleoplasm

spliceosomal complex

nucleolus

cytoplasm

heterogeneous nuclear ribonucleoprotein complex

regulation of RNA splicing

 
206544_x_at -0.881 7.914 -3.459 3.448e-03 0.145 -1.710 SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 9 2005341 NM_003070 9p22.3 Hs.298990 63

nucleotide binding

DNA binding

transcription coactivator activity

helicase activity

protein binding

ATP binding

nucleus

nucleoplasm

chromatin remodeling

regulation of transcription from RNA polymerase II promoter

DNA-dependent ATPase activity

positive regulation of specific transcription from RNA polymerase II promoter

negative regulation of specific transcription from RNA polymerase II promoter

SWI/SNF complex

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

 
228559_at -0.529 3.871 -3.457 3.455e-03 0.145 -1.712 CENPN centromere protein N 16 79597603, 79597603, 79597603 BF111626 16q23.2 Hs.55028 9

chromosome, centromeric region

condensed chromosome kinetochore

nucleus

chromosome

 
201227_s_at 0.444 10.740 3.457 3.459e-03 0.145 -1.713 NDUFB8 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa 10 -102273486 NM_005004 10q23.2-q23.33 Hs.523215 16

NADH dehydrogenase activity

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

endoplasmic reticulum

mitochondrial electron transport, NADH to ubiquinone

transport

NADH dehydrogenase (ubiquinone) activity

membrane

integral to membrane

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

1555372_at 0.687 5.773 3.455 3.472e-03 0.145 -1.716 BCL2L11 BCL2-like 11 (apoptosis facilitator) 2 111594961, 111594961 AF455755 2q13 Hs.469658 143

peripheral to membrane of membrane fraction

in utero embryonic development

B cell homeostasis

B cell apoptosis

kidney development

myeloid cell homeostasis

protein binding

cytoplasm

mitochondrion

mitochondrial outer membrane

cytosol

plasma membrane

induction of apoptosis

cell-matrix adhesion

spermatogenesis

microtubule binding

male gonad development

activation of pro-apoptotic gene products

post-embryonic development

mammary gland development

tube lumen formation

odontogenesis of dentine-containing tooth

T cell homeostasis

ear development

regulation of organ growth

regulation of pigmentation during development

spleen development

thymus development

post-embryonic organ morphogenesis

 
232000_at -0.889 3.038 -3.454 3.477e-03 0.145 -1.717 TTC39B tetratricopeptide repeat domain 39B 9 -15161560 AW001030 9p22.3 Hs.563630 3

binding

 
1558233_s_at -0.577 7.094 -3.451 3.504e-03 0.146 -1.725 ATF1 activating transcription factor 1 12 49444085 CA337502 12q13 Hs.648565 45

transcription factor activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

sequence-specific DNA binding

protein dimerization activity

 
224642_at -1.181 7.117 -3.451 3.505e-03 0.146 -1.725 FYTTD1 forty-two-three domain containing 1 3 198960820, 198961020, 198961657 BG291550 3q29 Hs.277533 6    
1556203_a_at 0.413 3.932 3.448 3.524e-03 0.147 -1.730 SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 1 204582822, 204582822 AI263819 1q32.1 Hs.497575 7

GTPase activator activity

intracellular

signal transduction

Axon guidance

226615_at -0.563 6.555 -3.443 3.561e-03 0.148 -1.740 XPR1 xenotropic and polytropic retrovirus receptor 1 178867768 BE439489 1q25.1 Hs.227656 6

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

G-protein coupled receptor protein signaling pathway

 
218999_at -0.927 7.217 -3.442 3.564e-03 0.148 -1.740 TMEM140 transmembrane protein 140 7 134483363 NM_018295 7q33 Hs.719309 8

membrane

integral to membrane

 
1554806_a_at -0.545 6.320 -3.442 3.565e-03 0.148 -1.741 FBXO8 F-box protein 8 4 -175394384 BC040456 4q34.1 Hs.76917 9

ubiquitin ligase complex

ARF guanyl-nucleotide exchange factor activity

intracellular

ubiquitin-dependent protein catabolic process

regulation of ARF protein signal transduction

 
222033_s_at 0.441 7.332 3.442 3.566e-03 0.148 -1.741 FLT1 fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor) 13 -27871181, -27857687, -27840233, -27772482 AA058828 13q12 Hs.654360 228

nucleotide binding

patterning of blood vessels

receptor activity

vascular endothelial growth factor receptor activity

ATP binding

extracellular region

extracellular space

cytoplasm

plasma membrane

plasma membrane

integral to plasma membrane

protein amino acid phosphorylation

transmembrane receptor protein tyrosine kinase signaling pathway

multicellular organismal development

female pregnancy

positive regulation of cell proliferation

cell migration

transferase activity

growth factor binding

cell differentiation

positive regulation of vascular endothelial growth factor receptor signaling pathway

identical protein binding

Cytokine-cytokine receptor interaction

Endocytosis

Focal adhesion

223519_at -0.812 9.964 -3.442 3.566e-03 0.148 -1.741 ZAK sterile alpha motif and leucine zipper containing kinase AZK 2 173648810, 173648810 AW069181 2q24.2 Hs.444451 24

cell cycle checkpoint

DNA damage checkpoint

nucleotide binding

activation of MAPKK activity

magnesium ion binding

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

protein tyrosine kinase activity

ATP binding

nucleus

cytoplasm

response to stress

cell cycle

cell cycle arrest

protein kinase cascade

activation of JUN kinase activity

cell death

cell proliferation

response to radiation

transferase activity

cell differentiation

identical protein binding

positive regulation of apoptosis

MAPK signaling pathway

Tight junction

222235_s_at -0.653 6.103 -3.440 3.586e-03 0.148 -1.746 CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 10 42953939 AL139812 10q11.21 Hs.657569 6

protein binding

Golgi apparatus

membrane

integral to membrane

transferase activity

integral to Golgi membrane

Golgi cisterna membrane

metal ion binding

glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity

dermatan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process

chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process

Chondroitin sulfate biosynthesis

Metabolic pathways

211761_s_at -0.440 9.436 -3.439 3.590e-03 0.148 -1.747 CACYBP calcyclin binding protein 1 173235193, 173235514 BC005975 1q24-q25 Hs.508524 15

protein binding

nucleus

cytoplasm

modification-dependent protein catabolic process

Wnt signaling pathway

222919_at -0.620 12.085 -3.438 3.598e-03 0.148 -1.749 TRDN triadin 6 -123579181 AA192306 6q22-q23 Hs.654601 19

receptor binding

cytoplasm

plasma membrane

muscle contraction

integral to membrane

sarcoplasmic reticulum

 
206853_s_at -0.410 6.486 -3.436 3.610e-03 0.149 -1.752 MAP3K7 mitogen-activated protein kinase kinase kinase 7 6 -91282073, -91282073 AL121964 6q16.1-q16.3 Hs.719192 114

nucleotide binding

magnesium ion binding

positive regulation of T cell cytokine production

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

cytosol

protein amino acid phosphorylation

signal transduction

transforming growth factor beta receptor signaling pathway

activation of NF-kappaB-inducing kinase activity

transferase activity

positive regulation of interleukin-2 production

T cell receptor signaling pathway

positive regulation of T cell activation

MAPK signaling pathway

Wnt signaling pathway

Adherens junction

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

T cell receptor signaling pathway

200924_s_at -0.498 6.644 -3.434 3.629e-03 0.149 -1.757 SLC3A2 solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 11 62380093, 62404862 NM_002394 11q13 Hs.502769 74

catalytic activity

calcium:sodium antiporter activity

protein binding

protein binding

plasma membrane

carbohydrate metabolic process

transport

calcium ion transport

amino acid transport

cell surface

neutral amino acid transmembrane transporter activity

tryptophan transport

integral to membrane

cell growth

melanosome

cation binding

leucine import

 
223082_at 1.047 8.513 3.433 3.635e-03 0.150 -1.758 SH3KBP1 SH3-domain kinase binding protein 1 X -19462003, -19462003 AF230904 Xp22.1-p21.3 Hs.719268 58

molecular_function

protein binding

nucleus

nucleolus

cytoplasm

cytosol

cytoskeleton

plasma membrane

focal adhesion

endocytosis

apoptosis

cell-cell signaling

SH3 domain binding

synaptosome

cell junction

cytoplasmic vesicle

synapse

Endocytosis

226580_at -0.533 7.477 -3.430 3.655e-03 0.150 -1.763 BRMS1L breast cancer metastasis-suppressor 1-like 14 35365347 AA779684 14q13.2 Hs.525299 3

nucleus

regulation of growth

regulation of transcription

 
212554_at -0.472 11.653 -3.430 3.656e-03 0.150 -1.763 CAP2 CAP, adenylate cyclase-associated protein, 2 (yeast) 6 17501714 N90755 6p22.3 Hs.132902 7

actin binding

binding

plasma membrane

cytoskeleton organization

establishment or maintenance of cell polarity

signal transduction

activation of adenylate cyclase activity

 
226277_at -0.559 7.980 -3.429 3.664e-03 0.150 -1.766 COL4A3BP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein 5 -74702683, -74702683 AA889952 5q13.3 Hs.270437 26

protein kinase activity

protein binding

cellular_component

cytoplasm

endoplasmic reticulum

Golgi apparatus

protein amino acid phosphorylation

lipid transport

immune response

 
207397_s_at 0.363 3.123 3.428 3.674e-03 0.150 -1.768 HOXD13 homeobox D13 2 176665777 NM_000523 2q31.1 Hs.152414 37

skeletal system development

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

multicellular organismal development

sequence-specific DNA binding

 
209207_s_at -0.555 6.153 -3.427 3.676e-03 0.150 -1.769 SEC22B SEC22 vesicle trafficking protein homolog B (S. cerevisiae) 1 143807763 BC001364 1q21.1 Hs.632438 Hs.715002 13

protein binding

endoplasmic reticulum

ER-Golgi intermediate compartment

Golgi apparatus

ER to Golgi vesicle-mediated transport

protein transport

membrane

integral to membrane

vesicle-mediated transport

melanosome

SNARE interactions in vesicular transport

209770_at 0.608 5.674 3.427 3.682e-03 0.150 -1.770 BTN3A1 butyrophilin, subfamily 3, member A1 6 26510443 U90552 6p22.1 Hs.191510 Hs.628564 10

lipid metabolic process

membrane

integral to membrane

 
1553422_s_at -0.509 9.039 -3.427 3.683e-03 0.150 -1.770 A2BP1 ataxin 2-binding protein 1 16 6009132, 6763810, 7322751 NM_145892 16p13.3 Hs.459842 22

nucleotide binding

RNA binding

nucleus

cytoplasm

trans-Golgi network

mRNA processing

protein C-terminus binding

RNA splicing

RNA transport

 
213086_s_at -0.705 8.418 -3.426 3.684e-03 0.150 -1.771 CSNK1A1 casein kinase 1, alpha 1 5 -148855037 BF341845 5q32 Hs.529862 Hs.712555 53

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

cytosol

protein amino acid phosphorylation

Wnt receptor signaling pathway

transferase activity

Wnt signaling pathway

Hedgehog signaling pathway

201245_s_at -0.501 7.079 -3.426 3.685e-03 0.150 -1.771 OTUB1 OTU domain, ubiquitin aldehyde binding 1 11 63509900 AL523776 11q13.1 Hs.473788 15

immune response

peptidase activity

cysteine-type peptidase activity

modification-dependent protein catabolic process

 
213592_at 0.738 6.462 3.426 3.686e-03 0.150 -1.771 APLNR apelin receptor 11 -56757629 X89271 11q12 Hs.438311 29

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

Neuroactive ligand-receptor interaction

202467_s_at -0.674 9.905 -3.425 3.692e-03 0.150 -1.773 COPS2 COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis) 15 -47204762 NM_004236 15q21.2 Hs.369614 37

signal transducer activity

protein binding

protein binding

nucleus

nucleolus

cytoplasm

transcription from RNA polymerase II promoter

signal transduction

signalosome

 
205757_at 0.344 4.339 3.425 3.695e-03 0.150 -1.773 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 14 -73502935 NM_001249 14q24 Hs.131555 14

magnesium ion binding

calcium ion binding

endoplasmic reticulum

endoplasmic reticulum lumen

hydrolase activity

nucleoside-diphosphatase activity

Purine metabolism

Pyrimidine metabolism

218168_s_at -0.587 11.345 -3.424 3.704e-03 0.150 -1.776 CABC1 chaperone, ABC1 activity of bc1 complex homolog (S. pombe) 1 225194560 NM_020247 1q42.13 Hs.118241 10

nucleotide binding

ATP binding

mitochondrion

cell death

kinase activity

transferase activity

 
240509_s_at -0.620 2.488 -3.423 3.712e-03 0.151 -1.777 GREM2 gremlin 2, cysteine knot superfamily, homolog (Xenopus laevis) 1 -238719495 BF064262 1q43 Hs.98206 9

cytokine activity

extracellular region

extracellular region

extracellular space

BMP signaling pathway

 
202733_at -0.598 6.211 -3.420 3.734e-03 0.151 -1.783 P4HA2 prolyl 4-hydroxylase, alpha polypeptide II 5 -131556204, -131556202, -131556202 NM_004199 5q31 Hs.519568 14

procollagen-proline 4-dioxygenase activity

iron ion binding

protein binding

endoplasmic reticulum

endoplasmic reticulum lumen

electron carrier activity

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

peptidyl-proline hydroxylation to 4-hydroxy-L-proline

L-ascorbic acid binding

metal ion binding

oxidation reduction

Arginine and proline metabolism

Metabolic pathways

1555971_s_at -0.500 7.134 -3.420 3.735e-03 0.151 -1.783 FBXO28 F-box protein 28 1 222368413 AU154086 1q42.11 Hs.64691 Hs.713992 10

modification-dependent protein catabolic process

 
1556190_s_at -0.464 3.310 -3.418 3.749e-03 0.151 -1.786 PRNP prion protein 20 4614796, 4615156 AK056897 20p13 Hs.472010 Hs.610285 Hs.707152 Hs.714553 353

copper ion binding

cytoplasm

endoplasmic reticulum

Golgi apparatus

plasma membrane

cellular copper ion homeostasis

anti-apoptosis

response to oxidative stress

microtubule binding

metabolic process

extrinsic to membrane

anchored to membrane

identical protein binding

membrane raft

response to cadmium ion

response to copper ion

protein homooligomerization

Prion diseases

235388_at -1.127 4.400 -3.417 3.753e-03 0.151 -1.787 CHD9 chromodomain helicase DNA binding protein 9 16 51646445 BG538482 16q12.2 Hs.59159 Hs.622347 10

nucleotide binding

chromatin

DNA binding

chromatin binding

helicase activity

protein binding

ATP binding

nucleus

cytoplasm

chromatin assembly or disassembly

chromatin modification

hydrolase activity

regulation of transcription

 
222396_at -1.217 8.041 -3.417 3.756e-03 0.151 -1.788 HN1 hematological and neurological expressed 1 17 -70642938, -70642938 AF060925 17q25.1 Hs.532803 Hs.713826 9

nucleus

 
225578_at -0.826 7.671 -3.416 3.763e-03 0.151 -1.790 C13orf37 chromosome 13 open reading frame 37 13 -72180495 AI885466 13q21.33-q22.1 Hs.28465 1    
217165_x_at -0.753 8.412 -3.416 3.764e-03 0.151 -1.790 MT1F metallothionein 1F 16 55249355 M10943 16q13 Hs.513626 20

copper ion binding

cytoplasm

biological_process

zinc ion binding

cadmium ion binding

metal ion binding

 
214844_s_at -0.717 9.310 -3.416 3.765e-03 0.151 -1.790 DOK5 docking protein 5 20 52525672 AL050069 20q13.2 Hs.656582 10

MAPKKK cascade

transmembrane receptor protein tyrosine kinase signaling protein activity

insulin receptor binding

transmembrane receptor protein tyrosine kinase signaling pathway

nervous system development

 
226678_at 0.463 6.434 3.415 3.769e-03 0.151 -1.791 UNC13D unc-13 homolog D (C. elegans) 17 -71334901 BG054744 17q25.1 Hs.41045 21

granuloma formation

germinal center formation

cytoplasm

exocytosis

phagocytosis

membrane

natural killer cell degranulation

defense response to virus

 
205951_at -2.367 11.141 -3.415 3.772e-03 0.151 -1.792 MYH1 myosin, heavy chain 1, skeletal muscle, adult 17 -10336348 NM_005963 17p13.1 Hs.689619 30

nucleotide binding

motor activity

actin binding

calmodulin binding

ATP binding

nucleolus

cytoplasm

striated muscle thick filament

focal adhesion

striated muscle contraction

myosin complex

myofibril

A band

Tight junction

218025_s_at 0.543 10.491 3.415 3.773e-03 0.151 -1.793 PECI peroxisomal D3,D2-enoyl-CoA isomerase 6 -4060925 NM_006117 6p24.3 Hs.15250 15

acyl-CoA binding

dodecenoyl-CoA delta-isomerase activity

binding

peroxisome

peroxisomal matrix

fatty acid metabolic process

metabolic process

isomerase activity

Fatty acid metabolism

228725_x_at -0.428 6.179 -3.414 3.776e-03 0.151 -1.793 PRMT2 protein arginine methyltransferase 2 21 46879954 BF003112 21q22.3 Hs.154163 17

signal transducer activity

nucleus

protein amino acid methylation

signal transduction

methyltransferase activity

transferase activity

identical protein binding

 
203914_x_at -0.815 5.134 -3.413 3.786e-03 0.152 -1.796 HPGD hydroxyprostaglandin dehydrogenase 15-(NAD) 4 -175647902, -175647902 NM_000860 4q34-q35 Hs.596913 47

prostaglandin E receptor activity

binding

nucleus

nucleolus

cytoplasm

cytosol

lipid metabolic process

fatty acid metabolic process

prostaglandin metabolic process

transforming growth factor beta receptor signaling pathway

female pregnancy

parturition

15-hydroxyprostaglandin dehydrogenase (NAD+) activity

oxidoreductase activity

lipoxygenase pathway

protein homodimerization activity

negative regulation of cell cycle

NAD or NADH binding

oxidation reduction

 
227022_at -0.714 5.800 -3.413 3.786e-03 0.152 -1.796 GNPDA2 glucosamine-6-phosphate deaminase 2 4 -44398924 AI817388 4p12 Hs.21398 6

glucosamine-6-phosphate deaminase activity

cytoplasm

carbohydrate metabolic process

N-acetylglucosamine metabolic process

hydrolase activity

Amino sugar and nucleotide sugar metabolism

Metabolic pathways

226353_at -0.815 8.706 -3.412 3.797e-03 0.152 -1.798 SPPL2A signal peptide peptidase-like 2A 15 -48787028 AI674647 15q21.2 Hs.401537 12

aspartic-type endopeptidase activity

peptidase activity

membrane

integral to membrane

 
228593_at 0.347 6.091 3.412 3.798e-03 0.152 -1.798 MTMR9L myotubularin related protein 9-like 1 -32469848 AI271425 1p35.1 Hs.471067 3    
225793_at -0.582 7.860 -3.411 3.801e-03 0.152 -1.799 LIX1L Lix1 homolog (mouse)-like 1 144188441 AW500180 1q21.1 Hs.632435 2    
201351_s_at -0.594 8.669 -3.411 3.802e-03 0.152 -1.800 YME1L1 YME1-like 1 (S. cerevisiae) 10 -27439388 AF070656 10p14 Hs.499145 Hs.74647 9

nucleotide binding

metalloendopeptidase activity

ATP binding

mitochondrion

proteolysis

peptidase activity

zinc ion binding

membrane

nucleoside-triphosphatase activity

metal ion binding

 
213554_s_at -0.484 6.317 -3.411 3.806e-03 0.152 -1.800 CDV3 CDV3 homolog (mouse) 3 134775123, 134775990 AI928407 3q22.1 Hs.518265 11

molecular_function

cellular_component

cytoplasm

cell proliferation

 
203906_at 0.448 7.755 3.410 3.807e-03 0.152 -1.801 IQSEC1 IQ motif and Sec7 domain 1 3 -12913718, -12913718 AI652645 3p25.2 Hs.475506 10

ARF guanyl-nucleotide exchange factor activity

intracellular

nucleus

cytoplasm

regulation of ARF protein signal transduction

Endocytosis

232740_at 0.371 2.920 3.409 3.816e-03 0.152 -1.803 MCM3APAS MCM3AP antisense RNA (non-protein coding) 21 46473585 BC002458 21q22.3 Hs.709346 3    
224367_at 2.900 6.783 3.408 3.823e-03 0.152 -1.805 BEX2 brain expressed X-linked 2 X -102450929 AF251053 Xq22 Hs.398989 11

nucleus

cytoplasm

 
1554415_at -0.717 4.626 -3.408 3.828e-03 0.152 -1.806 TAF5L TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa 1 -227801563, -227795486 BC041094 1q42.13 Hs.270621 16

transcription factor activity

transcription coactivator activity

histone acetyltransferase activity

nucleus

transcription from RNA polymerase II promoter

STAGA complex

transcription factor TFTC complex

histone H3 acetylation

regulation of transcription

Basal transcription factors

206833_s_at -0.678 10.363 -3.407 3.834e-03 0.152 -1.807 ACYP2 acylphosphatase 2, muscle type 2 54195913 NM_001108 2p16.2 Hs.516173 Hs.642983 16

acylphosphatase activity

phosphate metabolic process

hydrolase activity

Pyruvate metabolism

Benzoate degradation via CoA ligation

222868_s_at 0.501 4.697 3.407 3.834e-03 0.152 -1.807 IL18BP interleukin 18 binding protein 11 71387605, 71387756, 71388310, 71388620 AI521549 11q13 Hs.591967 22

extracellular region

interleukin-18 binding

T-helper 1 type immune response

receptor antagonist activity

 
220254_at -0.603 3.707 -3.406 3.840e-03 0.152 -1.809 LRP12 low density lipoprotein-related protein 12 8 -105570642 NM_013437 8q22.2-q23.1 Hs.600630 8

receptor activity

low-density lipoprotein receptor activity

protein binding

nucleolus

cytoplasm

plasma membrane

integral to plasma membrane

coated pit

endocytosis

signal transduction

regulation of growth

 
211746_x_at -0.286 10.723 -3.406 3.841e-03 0.152 -1.809 PSMA1 proteasome (prosome, macropain) subunit, alpha type, 1 11 -14492087, -14482998, -14482998 BC005932 11p15.1 Hs.102798 Hs.445711 52

RNA binding

threonine-type endopeptidase activity

protein binding

nucleus

cytoplasm

cytosol

proteasome core complex

polysome

ubiquitin-dependent protein catabolic process

peptidase activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

proteolysis involved in cellular protein catabolic process

Proteasome

1556228_a_at -0.463 5.248 -3.406 3.844e-03 0.152 -1.810 VCPIP1 valosin containing protein (p97)/p47 complex interacting protein 1 8 -67705041 AF088033 8q13 Hs.632066 16

ubiquitin-specific protease activity

cytoplasm

endoplasmic reticulum

Golgi apparatus

Golgi stack

peptidase activity

cysteine-type peptidase activity

protein ubiquitination

modification-dependent protein catabolic process

 
224932_at 0.612 11.130 3.406 3.846e-03 0.152 -1.810 CHCHD10 coiled-coil-helix-coiled-coil-helix domain containing 10 22 -22438020 AI814909 22q11.23 Hs.66915 2

mitochondrion

 
238890_at -0.625 5.500 -3.403 3.864e-03 0.153 -1.814 PSMG1 proteasome (prosome, macropain) assembly chaperone 1 21 -39469253 AI791303 21q22.3 Hs.473838 12

protein binding

cytoplasm

endoplasmic reticulum

proteasome assembly

 
223021_x_at -0.776 7.356 -3.403 3.866e-03 0.153 -1.815 VTA1 Vps20-associated 1 homolog (S. cerevisiae) 6 142510102 BF241590 6q24.1 Hs.431367 12

cytoplasm

endosome

protein transport

membrane

Endocytosis

219165_at 1.019 8.954 3.403 3.866e-03 0.153 -1.815 PDLIM2 PDZ and LIM domain 2 (mystique) 8 22492587, 22493928, 22493928 NM_021630 8p21.2 Hs.632034 10

protein binding

nucleus

cytoplasm

cytoskeleton

zinc ion binding

cell surface

metal ion binding

 
208669_s_at -0.435 9.563 -3.403 3.869e-03 0.153 -1.816 EID1 EP300 interacting inhibitor of differentiation 1 15 46957581 AF109873 15q21.1-q21.2 Hs.255973 Hs.714048 12

negative regulation of transcription from RNA polymerase II promoter

transcription corepressor activity

protein binding

cellular_component

nucleus

cytoplasm

cell cycle

specific transcriptional repressor activity

cell differentiation

histone acetyltransferase regulator activity

histone acetyltransferase binding

regulation of transcription

 
200720_s_at -0.516 7.918 -3.402 3.874e-03 0.153 -1.817 ACTR1A ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) 10 -104228976 AL532341 10q24.32 Hs.153961 26

nucleotide binding

protein binding

ATP binding

cytoplasm

centrosome

cytoskeleton

dynactin complex

vesicle-mediated transport

 
232932_at 0.425 5.416 3.402 3.877e-03 0.153 -1.817 LOC645030 hypothetical protein LOC645030 1   AU145140 1p31.3 Hs.632410      
212599_at -0.923 6.733 -3.401 3.884e-03 0.153 -1.819 AUTS2 autism susceptibility candidate 2 7 68701840, 68701841, 68701841 AK025298 7q11.22 Hs.654801 Hs.712991 13

molecular_function

cellular_component

biological_process

 
205173_x_at -0.523 6.740 -3.399 3.897e-03 0.153 -1.822 CD58 CD58 molecule 1 -116862845, -116858679 NM_001779 1p13 Hs.34341 38

protein binding

plasma membrane

integral to plasma membrane

cell-cell adhesion

anchored to membrane

Cell adhesion molecules (CAMs)

1569351_at 0.327 4.829 3.399 3.897e-03 0.153 -1.822 SOBP sine oculis binding protein homolog (Drosophila) 6 107918009 BC014859 6q21 Hs.445244 4

zinc ion binding

metal ion binding

 
203662_s_at -0.700 9.137 -3.399 3.898e-03 0.153 -1.822 TMOD1 tropomodulin 1 9 99326257 NM_003275 9q22.3 Hs.494595 18

actin binding

tropomyosin binding

nucleus

cytoplasm

membrane

myofibril

myofibril assembly

cortical cytoskeleton

 
212032_s_at -0.542 7.334 -3.399 3.901e-03 0.153 -1.823 PTOV1 prostate tumor overexpressed 1 19 55046227 AL046054 19q13.33 Hs.587979 11

nucleus

cytoplasm

plasma membrane

regulation of transcription

perinuclear region of cytoplasm

 
214646_at 0.336 4.847 3.398 3.907e-03 0.153 -1.824 HIST1H3J histone cluster 1, H3j 6 -27966071 AL522145 6p22-p21.3 Hs.484990 8  

Systemic lupus erythematosus

204142_at -0.895 6.051 -3.398 3.910e-03 0.153 -1.825 ENOSF1 enolase superfamily member 1 18 -663860, -663860, -662543 NM_017512 18p11.32 Hs.369762 Hs.658550 12

magnesium ion binding

cellular_component

mitochondrion

metabolic process

cellular amino acid catabolic process

isomerase activity

 
1556209_at -1.256 4.095 -3.397 3.917e-03 0.153 -1.827 CLEC2B C-type lectin domain family 2, member B 12 -9896234 CA447397 12p13-p12 Hs.85201 10

binding

sugar binding

integral to plasma membrane

membrane

 
213476_x_at -0.810 7.695 -3.396 3.919e-03 0.153 -1.827 TUBB3 tubulin, beta 3 16 88517245 AL565749 16q24.3 Hs.511743 41

nucleotide binding

GTPase activity

structural molecule activity

GTP binding

intracellular

microtubule

microtubule-based movement

mitosis

neuron differentiation

axon

protein complex

protein polymerization

Gap junction

Pathogenic Escherichia coli infection - EHEC

224628_at -0.400 8.307 -3.395 3.928e-03 0.153 -1.829 ERLEC1 endoplasmic reticulum lectin 1 2 53867571 AF131743 2p16.2 Hs.438336 Hs.713845 10

protein binding

endoplasmic reticulum

endoplasmic reticulum lumen

 
201161_s_at -0.546 12.823 -3.395 3.931e-03 0.153 -1.830 CSDA cold shock domain protein A 12 -10742944 NM_003651 12p13.1 Hs.221889 20

negative regulation of transcription from RNA polymerase II promoter

double-stranded DNA binding

transcription factor activity

RNA polymerase II transcription factor activity

transcription corepressor activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

response to cold

Tight junction

208675_s_at -0.459 8.268 -3.395 3.932e-03 0.153 -1.830 DDOST dolichyl-diphosphooligosaccharide-protein glycosyltransferase 1 -20850846 D29643 1p36.1 Hs.523145 12

dolichyl-diphosphooligosaccharide-protein glycotransferase activity

protein binding

endoplasmic reticulum

microsome

protein amino acid terminal N-glycosylation

oligosaccharyltransferase complex

membrane

integral to membrane

transferase activity

protein amino acid N-linked glycosylation via asparagine

response to cytokine stimulus

T cell activation

N-Glycan biosynthesis

Metabolic pathways

208776_at -0.629 7.169 -3.395 3.933e-03 0.153 -1.830 PSMD11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 17 27795614 BF432873 17q11.2 Hs.655396 41

proteasome complex

protein binding

cytosol

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

227649_s_at 0.327 5.412 3.393 3.947e-03 0.154 -1.834 SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 1 204582822, 204582822 AU144000 1q32.1 Hs.497575 7

GTPase activator activity

intracellular

signal transduction

Axon guidance

225433_at -0.750 6.980 -3.392 3.955e-03 0.154 -1.836 GTF2A1 general transcription factor IIA, 1, 19/37kDa 14 -80716146, -80716146 AU144104 14q31.1 Hs.592334 Hs.593630 45

DNA binding

transcription coactivator activity

nucleus

nucleoplasm

transcription factor TFIIA complex

nucleolus

cytoplasm

transcription initiation from RNA polymerase II promoter

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

transcription factor binding

general RNA polymerase II transcription factor activity

TATA-binding protein binding

general transcription from RNA polymerase II promoter

regulation of transcription

protein heterodimerization activity

Basal transcription factors

219863_at 0.510 4.663 3.391 3.966e-03 0.154 -1.838 HERC5 hect domain and RLD 5 4 89597290 NM_016323 4q22.1 Hs.26663 10

regulation of cyclin-dependent protein kinase activity

intracellular

cytoplasm

protein modification process

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

perinuclear region of cytoplasm

 
212485_at -0.716 7.334 -3.389 3.977e-03 0.155 -1.840 GPATCH8 G patch domain containing 8 17 -39828175 AU146596 17q21.31 Hs.463129 8

molecular_function

cellular_component

biological_process

 
239203_at -1.209 8.595 -3.388 3.988e-03 0.155 -1.843 C7orf53 chromosome 7 open reading frame 53 7 111908143, 111908301 AW014728 7q31.1 Hs.396189 5

membrane

integral to membrane

 
206241_at -0.870 5.551 -3.387 3.997e-03 0.155 -1.845 KPNA5 karyopherin alpha 5 (importin alpha 6) 6 117109059 NM_002269 6q22.1 Hs.182971 46

protein binding

nucleus

nuclear pore

cytoplasm

NLS-bearing substrate import into nucleus

intracellular protein transport

protein transporter activity

 
221559_s_at -0.678 7.202 -3.387 4.000e-03 0.155 -1.846 MIS12 MIS12, MIND kinetochore complex component, homolog (S. pombe) 17 5330970 BC000229 17p13.2 Hs.267194 11

MIS12/MIND type complex

chromosome, centromeric region

protein binding

nucleus

cell cycle

chromosome segregation

mitosis

cell division

kinetochore assembly

 
239839_at 0.523 4.127 3.386 4.007e-03 0.155 -1.848 ZNF555 zinc finger protein 555 19 2792481 BF435923 19p13.3 Hs.47712 7

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
221676_s_at -0.547 5.968 -3.385 4.012e-03 0.155 -1.849 CORO1C coronin, actin binding protein, 1C 12 -107563015 BC002342 12q24.1 Hs.330384 12

actin binding

phagocytosis

signal transduction

actin cytoskeleton

 
229110_at 1.060 3.472 3.385 4.012e-03 0.155 -1.849 LOC100128844 hypothetical protein LOC100128844 9   N50083 9p22.1 Hs.593150      
218108_at -0.460 6.381 -3.384 4.020e-03 0.155 -1.850 UBR7 ubiquitin protein ligase E3 component n-recognin 7 (putative) 14 92743153 NM_018108 14q32.12 Hs.648806 7

molecular_function

ubiquitin-protein ligase activity

protein binding

biological_process

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
227424_x_at -0.513 6.524 -3.384 4.021e-03 0.155 -1.851 C21orf119 chromosome 21 open reading frame 119 21 32687312 AI800837 21q22.11 Hs.58149 2    
225797_at -0.519 7.876 -3.383 4.026e-03 0.155 -1.852 MRPL54 mitochondrial ribosomal protein L54 19 3713664 AV707568 19p13.3 Hs.356578 5

mitochondrion

ribosome

 
209139_s_at -0.550 9.622 -3.383 4.029e-03 0.155 -1.852 PRKRA protein kinase, interferon-inducible double stranded RNA dependent activator 2 -179004387, -179004387, -179004387 AF083033 2q31.2 Hs.570274 27

double-stranded RNA binding

protein binding

intracellular

cytoplasm

protein amino acid phosphorylation

induction of apoptosis

response to stress

immune response

enzyme activator activity

negative regulation of cell proliferation

response to virus

RNA interference, production of siRNA

gene silencing by RNA

outer ear morphogenesis

middle ear morphogenesis

protein homodimerization activity

perinuclear region of cytoplasm

skeletal system morphogenesis

 
1568900_a_at 0.447 3.053 3.383 4.033e-03 0.155 -1.853 ZNF568 zinc finger protein 568 19 42099073 BC031218 19q13.12 Hs.404220 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
221505_at -0.478 8.351 -3.382 4.041e-03 0.156 -1.855 ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 1 -148457341, -148457341 AW612574 1q21.2 Hs.656466 14

protein binding

nucleus

cytoplasm

cytoplasmic membrane-bounded vesicle

phosphatase inhibitor activity

 
214177_s_at -0.836 8.347 -3.381 4.048e-03 0.156 -1.857 PBXIP1 pre-B-cell leukemia homeobox interacting protein 1 1 -153183179 AI935162 1q21.3 Hs.505806 8

transcription corepressor activity

protein binding

nucleus

cytoplasm

cytosol

cytoskeleton

microtubule

multicellular organismal development

negative regulation of transcription

cell differentiation

 
208977_x_at -0.850 8.862 -3.379 4.066e-03 0.156 -1.861 TUBB2C tubulin, beta 2C 9 139255531 BC004188 9q34 Hs.433615 25

nucleotide binding

GTPase activity

structural molecule activity

GTP binding

cytoskeleton

microtubule

cell motion

microtubule-based movement

natural killer cell mediated cytotoxicity

MHC class I protein binding

protein complex

unfolded protein binding

protein polymerization

Gap junction

Pathogenic Escherichia coli infection - EHEC

222394_at -0.559 7.107 -3.376 4.085e-03 0.156 -1.865 PDCD6IP programmed cell death 6 interacting protein 3 33815069, 33815069, 33845133 BG484789 3p22.3 Hs.475896 65

protein binding

cytoplasm

centrosome

cytosol

apoptosis

cell cycle

protein transport

melanosome

interspecies interaction between organisms

cell division

Endocytosis

209107_x_at -0.407 7.573 -3.376 4.089e-03 0.156 -1.866 NCOA1 nuclear receptor coactivator 1 2 24660849 U19179 2p23 Hs.596314 123

DNA binding

chromatin binding

transcription coactivator activity

histone acetyltransferase activity

signal transducer activity

nucleus

signal transduction

acyltransferase activity

transferase activity

androgen receptor signaling pathway

transcription regulator activity

nuclear hormone receptor binding

positive regulation of transcription from RNA polymerase II promoter

protein N-terminus binding

androgen receptor binding

 
218545_at -0.584 7.762 -3.376 4.090e-03 0.156 -1.866 CCDC91 coiled-coil domain containing 91 12 28301399 NM_018318 12p11.22 Hs.653125 8

Golgi apparatus

protein transport

membrane

 
212935_at 0.482 6.813 3.375 4.094e-03 0.156 -1.867 MCF2L MCF.2 cell line derived transforming sequence-like 13 112670757, 112681655 AB002360 13q34 Hs.170422 Hs.597691 15

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

intracellular

cytoplasm

mitochondrion

plasma membrane

intracellular signaling cascade

regulation of Rho protein signal transduction

 
65517_at 0.388 6.223 3.374 4.105e-03 0.157 -1.870 AP1M2 adaptor-related protein complex 1, mu 2 subunit 19 -10544347 AA910946 19p13.2 Hs.18894 28

protein binding

Golgi apparatus

cytosol

protein targeting

vesicle targeting

membrane

clathrin adaptor complex

cytoplasmic vesicle

Lysosome

222634_s_at -0.653 4.726 -3.373 4.111e-03 0.157 -1.871 TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 3 -178221235 AF314544 3q26.32 Hs.715537 14

nucleus

chromatin modification

modification-dependent protein catabolic process

regulation of transcription

Wnt signaling pathway

226037_s_at -0.592 6.758 -3.373 4.114e-03 0.157 -1.872 TAF9B TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa X -77271900, 1383006 AL049589 Xq13.1-q21.1 Hs.592248 Hs.643614 Hs.714006 8

DNA binding

transcription corepressor activity

protein binding

nucleus

transcription factor TFIID complex

transcription initiation

negative regulation of specific transcription from RNA polymerase II promoter

positive regulation of cell growth

transcription factor TFTC complex

negative regulation of apoptosis

regulation of transcription

Basal transcription factors

221942_s_at 0.603 6.729 3.372 4.122e-03 0.157 -1.873 GUCY1A3 guanylate cyclase 1, soluble, alpha 3 4 156807311, 156807311, 156807311, 156807598, 156807598, 156808264 AI719730 4q31.1-q31.2 4q31.3-q33 Hs.24258 14

nucleotide binding

guanylate cyclase activity

receptor activity

GTP binding

cytoplasm

nitric oxide mediated signal transduction

guanylate cyclase complex, soluble

regulation of blood pressure

positive regulation of cGMP biosynthetic process

response to defense-related host nitric oxide production

relaxation of vascular smooth muscle

Purine metabolism

Vascular smooth muscle contraction

Gap junction

Long-term depression

244428_at 0.407 4.351 3.371 4.127e-03 0.157 -1.875 DNMT3A DNA (cytosine-5-)-methyltransferase 3 alpha 2 -25357824, -25309348, -25309348, -25309348 AW572279 2p23 Hs.515840 54

euchromatin

DNA binding

DNA (cytosine-5-)-methyltransferase activity

protein binding

nucleus

cytoplasm

DNA methylation

genetic imprinting

methyltransferase activity

zinc ion binding

nuclear matrix

transferase activity

metal ion binding

Cysteine and methionine metabolism

Metabolic pathways

203605_at -0.524 7.496 -3.371 4.134e-03 0.157 -1.876 SRP54 signal recognition particle 54kDa 14 34521854 NM_003136 14q13.2 Hs.167535 15

nucleotide binding

GTPase activity

protein binding

GTP binding

nucleus

nucleolus

cytoplasm

signal recognition particle, endoplasmic reticulum targeting

SRP-dependent cotranslational protein targeting to membrane, translocation

SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition

drug binding

7S RNA binding

nuclear speck

GDP binding

endoplasmic reticulum signal peptide binding

response to drug

ribonucleoprotein binding

Protein export

203285_s_at -0.635 4.425 -3.369 4.144e-03 0.157 -1.878 HS2ST1 heparan sulfate 2-O-sulfotransferase 1 1 87152922, 87152922 NM_012262 1p31.1-p22.1 Hs.719144 9

Golgi apparatus

membrane

integral to membrane

transferase activity

Heparan sulfate biosynthesis

209032_s_at 0.701 6.063 3.369 4.144e-03 0.157 -1.878 CADM1 cell adhesion molecule 1 11 -114549554 AF132811 11q23.2 Hs.370510 50

T cell mediated cytotoxicity

receptor binding

receptor binding

plasma membrane

cell-cell junction

apoptosis

immune response

cell adhesion

homophilic cell adhesion

heterophilic cell adhesion

multicellular organismal development

spermatogenesis

protein C-terminus binding

cell recognition

cell recognition

integral to membrane

basolateral plasma membrane

cell differentiation

PDZ domain binding

susceptibility to natural killer cell mediated cytotoxicity

susceptibility to natural killer cell mediated cytotoxicity

protein homodimerization activity

positive regulation of cytokine secretion

activated T cell proliferation

detection of stimulus

detection of stimulus

Cell adhesion molecules (CAMs)

226899_at 1.034 5.673 3.369 4.149e-03 0.157 -1.879 UNC5B unc-5 homolog B (C. elegans) 10 72642303 AK022859 10q22.1 Hs.522997 12

receptor activity

protein binding

apoptosis

signal transduction

multicellular organismal development

membrane

integral to membrane

Axon guidance

232983_s_at -0.435 6.112 -3.367 4.161e-03 0.158 -1.882 SERGEF secretion regulating guanine nucleotide exchange factor 11 -17766171 AJ243951 11p14.3 Hs.32470 7

guanyl-nucleotide exchange factor activity

Ran guanyl-nucleotide exchange factor activity

protein binding

nucleus

cytoplasm

signal transduction

negative regulation of protein secretion

 
1558969_a_at 0.314 5.256 3.367 4.163e-03 0.158 -1.882 RPL32P3 ribosomal protein L32 pseudogene 3 3 -130584366 BG741817 3q21.3 Hs.477537 Hs.652423 2    
217870_s_at -0.563 9.052 -3.366 4.170e-03 0.158 -1.884 CMPK1 cytidine monophosphate (UMP-CMP) kinase 1, cytosolic 1 47572055 NM_016308 1p32 Hs.714325 16

nucleotide binding

cytidylate kinase activity

uridine kinase activity

ATP binding

nucleus

cytoplasm

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

pyrimidine ribonucleotide biosynthetic process

transferase activity

phosphotransferase activity, phosphate group as acceptor

Pyrimidine metabolism

Metabolic pathways

202090_s_at 0.368 11.887 3.365 4.180e-03 0.158 -1.886 UQCR ubiquinol-cytochrome c reductase, 6.4kDa subunit 19 -1548170 NM_006830 19p13.3 Hs.8372 4

mitochondrion

mitochondrial inner membrane

mitochondrial electron transport, ubiquinol to cytochrome c

transport

ubiquinol-cytochrome-c reductase activity

electron carrier activity

membrane

integral to membrane

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Cardiac muscle contraction

Alzheimer's disease

Parkinson's disease

Huntington's disease

212435_at -0.448 7.497 -3.363 4.195e-03 0.158 -1.889 TRIM33 tripartite motif-containing 33 1 -114736921 AA205593 1p13.1 Hs.26837 12

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

negative regulation of transcription

protein ubiquitination

ligase activity

regulation of transforming growth factor beta receptor signaling pathway

modification-dependent protein catabolic process

negative regulation of BMP signaling pathway

metal ion binding

co-SMAD binding

R-SMAD binding

 
214093_s_at -0.656 6.861 -3.363 4.197e-03 0.158 -1.890 FUBP1 far upstream element (FUSE) binding protein 1 1 -78186178 AA156865 1p31.1 Hs.567380 28

single-stranded DNA binding

transcription factor activity

RNA binding

protein binding

nucleus

nucleolus

transcription from RNA polymerase II promoter

regulation of transcription

 
228433_at -0.388 5.286 -3.363 4.199e-03 0.158 -1.890 NFYA nuclear transcription factor Y, alpha 6 41148684 AU157605 6p21.3 Hs.10441 55

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

CCAAT-binding factor complex

Antigen processing and presentation

226748_at -0.932 8.208 -3.363 4.203e-03 0.158 -1.891 LYSMD2 LysM, putative peptidoglycan-binding, domain containing 2 15 -49802553, -49802553 AI674731 15q21.2 Hs.631693 3

cell wall macromolecule catabolic process

 
224318_s_at -0.638 8.751 -3.362 4.211e-03 0.158 -1.893 KIAA1310 KIAA1310 2 -96622633 AF311326 2p12-p11.2 Hs.516341 10    
208869_s_at -0.798 6.940 -3.361 4.213e-03 0.158 -1.893 GABARAPL1 GABA(A) receptor-associated protein like 1 12 10256755 AF087847 12p13.2 Hs.524250 18

protein binding

intracellular

cytoplasm

autophagic vacuole

endoplasmic reticulum

Golgi apparatus

microtubule

membrane

beta-tubulin binding

GABA receptor binding

Regulation of autophagy

242408_at -0.463 3.130 -3.361 4.217e-03 0.158 -1.894 STYX serine/threonine/tyrosine interacting protein 14 52266632 AW968935   Hs.364980 8

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

 
218583_s_at -0.480 8.112 -3.361 4.217e-03 0.158 -1.894 DCUN1D1 DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) 3 -184143252 NM_020640 3q26.3 Hs.715661 16

molecular_function

cellular_component

biological_process

modification-dependent protein catabolic process

 
208722_s_at -0.560 7.308 -3.360 4.228e-03 0.159 -1.897 ANAPC5 anaphase promoting complex subunit 5 12 -120230432, -120230432 BC001081 12q24.31 Hs.7101 28

G2/M transition of mitotic cell cycle

mitotic anaphase

ubiquitin-protein ligase activity

binding

nucleoplasm

anaphase-promoting complex

cytosol

ubiquitin-dependent protein catabolic process

cell cycle

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

cell division

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

203098_at -0.521 6.865 -3.360 4.229e-03 0.159 -1.897 CDYL chromodomain protein, Y-like 6 4651391, 4721678, 4781330, 4835224 AL050164 6p25.1 Hs.269092 8

chromatin

chromatin binding

histone acetyltransferase activity

nucleus

chromatin assembly or disassembly

spermatogenesis

metabolic process

acyltransferase activity

transferase activity

regulation of transcription

 
228810_at -0.654 5.632 -3.360 4.229e-03 0.159 -1.897 CCNYL1 cyclin Y-like 1 2 208284508 AW135279 2q33.3 Hs.471234 Hs.597952 5    
224711_at -0.513 7.839 -3.358 4.242e-03 0.159 -1.900 YY1 YY1 transcription factor 14 99774854 AI670903 14q Hs.388927 97

transcription factor activity

transcription coactivator activity

transcription corepressor activity

protein binding

intracellular

nucleus

transcription factor complex

plasma membrane

regulation of transcription from RNA polymerase II promoter

zinc ion binding

anterior/posterior pattern formation

nuclear matrix

PcG protein complex

metal ion binding

camera-type eye morphogenesis

 
218312_s_at 0.649 7.394 3.356 4.261e-03 0.159 -1.904 ZSCAN18 zinc finger and SCAN domain containing 18 19 -63310783, -63287021, -63287021 NM_023926 19q13.43 Hs.235390 5

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
203804_s_at -0.427 8.942 -3.356 4.261e-03 0.159 -1.904 LUC7L3 LUC7-like 3 (S. cerevisiae) 17 46151975 NM_006107 17q21.33 Hs.130293 15

DNA binding

mRNA binding

protein binding

nucleus

mRNA processing

apoptosis

response to stress

RNA splicing

nuclear speck

 
200894_s_at -0.592 6.051 -3.355 4.268e-03 0.159 -1.905 FKBP4 FK506 binding protein 4, 59kDa 12 2774368 AA894574 12p13.33 Hs.524183 Hs.713721 47

peptidyl-prolyl cis-trans isomerase activity

ATP binding

GTP binding

FK506 binding

intracellular

nucleus

nucleolus

cytoplasm

protein folding

steroid hormone receptor complex assembly

copper ion transport

embryo implantation

isomerase activity

protein binding, bridging

heat shock protein binding

protein complex localization

glucocorticoid receptor binding

male sex differentiation

phosphoprotein binding

 
222713_s_at -0.310 4.219 -3.355 4.272e-03 0.159 -1.906 FANCF Fanconi anemia, complementation group F 11 -22600654 AF181995 11p15 Hs.713574 27

molecular_function

protein binding

cellular_component

nucleus

DNA repair

response to DNA damage stimulus

biological_process

 
1559489_a_at 0.345 4.708 3.354 4.280e-03 0.159 -1.908 LOC257358 hypothetical LOC257358 5 169691012 AK093725 5q35.1 Hs.249689 3    
222742_s_at 0.455 8.412 3.354 4.281e-03 0.159 -1.908 RABL5 RAB, member RAS oncogene family-like 5 7 -100743368 AW026449 7q22.1 Hs.389104 4

nucleotide binding

GTP binding

 
212330_at -0.575 7.561 -3.353 4.283e-03 0.159 -1.908 TFDP1 transcription factor Dp-1 13 113287003, 113287056 R60866 13q34 Hs.79353 37

transcription factor activity

transcription coactivator activity

nucleus

nucleoplasm

transcription factor complex

regulation of transcription from RNA polymerase II promoter

cell cycle

transcription factor binding

cell proliferation

protein domain specific binding

Cell cycle

TGF-beta signaling pathway

209090_s_at -0.658 9.676 -3.353 4.284e-03 0.159 -1.909 SH3GLB1 SH3-domain GRB2-like endophilin B1 1 86942844 AL049597 1p22 Hs.136309 28

protein insertion into mitochondrial membrane during induction of apoptosis

fatty acid binding

protein binding

nucleus

cytoplasm

mitochondrion

mitochondrial outer membrane

microsome

Golgi apparatus

phosphatidic acid biosynthetic process

apoptosis

anti-apoptosis

phospholipid biosynthetic process

membrane

lysophosphatidic acid acyltransferase activity

protein homodimerization activity

protein complex

'de novo' posttranslational protein folding

Endocytosis

214493_s_at -0.648 4.578 -3.352 4.299e-03 0.160 -1.912 INADL InaD-like (Drosophila) 1 61980736 NM_005799 1p31.3 Hs.478125 24

protein binding

cellular_component

plasma membrane

tight junction

intracellular signaling cascade

apical plasma membrane

cell junction

Tight junction

205019_s_at 0.459 5.899 3.349 4.318e-03 0.160 -1.916 VIPR1 vasoactive intestinal peptide receptor 1 3 42519107 NM_004624 3p22 Hs.348500 65

vasoactive intestinal polypeptide receptor activity

plasma membrane

integral to plasma membrane

muscle contraction

immune response

G-protein signaling, coupled to cyclic nucleotide second messenger

synaptic transmission

digestion

positive regulation of cell proliferation

Neuroactive ligand-receptor interaction

217755_at -1.172 7.671 -3.348 4.334e-03 0.161 -1.919 HN1 hematological and neurological expressed 1 17 -70642938, -70642938 NM_016185 17q25.1 Hs.532803 Hs.713826 9

nucleus

 
225811_at -0.567 9.799 -3.346 4.346e-03 0.161 -1.922 C11orf58 chromosome 11 open reading frame 58 11 16716723 AI652868 11p15.1 Hs.719128 8

molecular_function

cellular_component

biological_process

 
235341_at 0.329 4.596 3.346 4.347e-03 0.161 -1.922 DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 13 95127402 AL119957 13q32.1 Hs.59214 19

protein kinase inhibitor activity

binding

cytoplasm

endoplasmic reticulum

response to unfolded protein

response to virus

heat shock protein binding

 
1556554_at 0.402 5.834 3.346 4.348e-03 0.161 -1.922 TRIM50 tripartite motif-containing 50 7 -72364470 AK057366 7q11.23 Hs.647053 4

protein binding

intracellular

cytoplasm

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
229943_at 0.731 6.690 3.345 4.356e-03 0.161 -1.924 TRIM13 tripartite motif-containing 13 13 49469143 BF939833 13q14 Hs.436922 14

signal transducer activity

protein binding

intracellular

cytoplasm

zinc ion binding

anatomical structure morphogenesis

positive regulation of I-kappaB kinase/NF-kappaB cascade

metal ion binding

 
1565269_s_at -0.837 5.359 -3.345 4.358e-03 0.161 -1.924 ATF1 activating transcription factor 1 12 49444085 AF047022 12q13 Hs.648565 45

transcription factor activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

sequence-specific DNA binding

protein dimerization activity

 
217741_s_at -0.976 8.246 -3.345 4.358e-03 0.161 -1.924 ZFAND5 zinc finger, AN1-type domain 5 9 -74156160 AW471220 9q13-q21 Hs.406096 6

in utero embryonic development

vasculature development

respiratory system process

molecular_function

DNA binding

cellular_component

biological_process

zinc ion binding

fibroblast migration

metal ion binding

platelet-derived growth factor receptor signaling pathway

skeletal system morphogenesis

smooth muscle tissue development

face development

 
209316_s_at -0.600 8.606 -3.345 4.360e-03 0.161 -1.925 HBS1L HBS1-like (S. cerevisiae) 6 -135398687, -135323215, -135323213 BC001465 6q23-q24 Hs.378532 12

nucleotide binding

translation elongation factor activity

GTPase activity

GTP binding

translation

signal transduction

 
214334_x_at -0.454 9.875 -3.344 4.365e-03 0.161 -1.926 DAZAP2 DAZ associated protein 2 12 49918774, 49918774 N34846 12q12 Hs.369761 15

protein binding

WW domain binding

 
215804_at 0.389 4.861 3.344 4.368e-03 0.161 -1.926 EPHA1 EPH receptor A1 7 -142798327 Z27409 7q34 Hs.89839 30

nucleotide binding

receptor activity

ephrin receptor activity

ATP binding

integral to plasma membrane

protein amino acid phosphorylation

signal transduction

transmembrane receptor protein tyrosine kinase signaling pathway

membrane

transferase activity

Axon guidance

225878_at -0.650 11.479 -3.343 4.381e-03 0.161 -1.929 KIF1B kinesin family member 1B 1 10193350, 10193350 AL135264 1p36.2 Hs.97858 33

nucleotide binding

microtubule motor activity

protein binding

ATP binding

cytoplasm

mitochondrion

cytoskeleton

microtubule

microtubule associated complex

microtubule-based movement

nerve-nerve synaptic transmission

neuromuscular synaptic transmission

anterograde axon cargo transport

ATPase activity

kinesin binding

cytoplasmic vesicle membrane

cytoskeleton-dependent intracellular transport

cytoplasmic vesicle

 
227310_at 0.342 3.014 3.342 4.388e-03 0.161 -1.931 ADSS adenylosuccinate synthase 1 -242638418 AI346678 1cen-q12 Hs.498313 11

nucleotide binding

magnesium ion binding

immune system process

adenylosuccinate synthase activity

adenylosuccinate synthase activity

GTP binding

cellular_component

cytoplasm

purine nucleotide biosynthetic process

AMP biosynthetic process

AMP biosynthetic process

ligase activity

phosphate binding

Purine metabolism

Alanine, aspartate and glutamate metabolism

Biosynthesis of alkaloids derived from histidine and purine

Metabolic pathways

217817_at -0.315 7.266 -3.341 4.394e-03 0.161 -1.932 ARPC4 actin related protein 2/3 complex, subunit 4, 20kDa 3 9809226 BE891920 3p25.3 Hs.323342 16

cytoplasm

cytoskeleton

Arp2/3 protein complex

actin filament polymerization

protein binding, bridging

cell projection

actin nucleation

actin filament binding

Fc gamma R-mediated phagocytosis

Regulation of actin cytoskeleton

208581_x_at -0.981 10.736 -3.341 4.396e-03 0.161 -1.932 MT1X metallothionein 1X 16 55273882 NM_005952 16q13 Hs.374950 18

copper ion binding

zinc ion binding

response to metal ion

cadmium ion binding

metal ion binding

 
202233_s_at 0.431 11.913 3.340 4.404e-03 0.161 -1.934 UQCRH ubiquinol-cytochrome c reductase hinge protein 1 46541966 NM_006004 1p34.1 Hs.481571 9

mitochondrion

mitochondrial respiratory chain

oxidative phosphorylation

mitochondrial electron transport, ubiquinol to cytochrome c

transport

ubiquinol-cytochrome-c reductase activity

aerobic respiration

membrane

electron transport chain

Oxidative phosphorylation

Metabolic pathways

Cardiac muscle contraction

Alzheimer's disease

Parkinson's disease

Huntington's disease

203021_at -1.878 5.977 -3.340 4.404e-03 0.161 -1.934 SLPI secretory leukocyte peptidase inhibitor 20 -43314292 NM_003064 20q12 Hs.517070 71

serine-type endopeptidase inhibitor activity

extracellular region

 
223478_at -0.470 7.772 -3.339 4.408e-03 0.161 -1.935 TIMM8B translocase of inner mitochondrial membrane 8 homolog B (yeast) 11 -111461079 AF165967 11q23.1-q23.2 Hs.279915 6

protein binding

mitochondrion

mitochondrial inner membrane presequence translocase complex

sensory perception of sound

zinc ion binding

protein transport

membrane

mitochondrial intermembrane space protein transporter complex

protein import into mitochondrial inner membrane

metal ion binding

intracellular protein transmembrane transport

 
218563_at 0.358 11.096 3.339 4.409e-03 0.161 -1.935 NDUFA3 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa 19 59297971 NM_004542 19q13.42 Hs.198269 7

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

transport

NADH dehydrogenase (ubiquinone) activity

membrane

integral to membrane

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

223490_s_at -0.472 5.070 -3.337 4.431e-03 0.162 -1.939 EXOSC3 exosome component 3 9 -37770307, -37770307 AF281132 9p11 Hs.602571 Hs.713483 12

3'-5'-exoribonuclease activity

nuclear exosome (RNase complex)

cytoplasmic exosome (RNase complex)

RNA binding

exonuclease activity

protein binding

nucleus

nucleolus

cytoplasm

rRNA processing

hydrolase activity

RNA degradation

212511_at -0.605 6.778 -3.337 4.432e-03 0.162 -1.940 PICALM phosphatidylinositol binding clathrin assembly protein 11 -85346132 AI766247 11q14 Hs.163893 22

phospholipid binding

phosphatidylinositol binding

Golgi apparatus

coated pit

protein complex assembly

receptor-mediated endocytosis

membrane

clathrin coat

clathrin-coated vesicle

clathrin binding

cytoplasmic vesicle

clathrin coat assembly

 
206174_s_at -0.607 7.891 -3.336 4.437e-03 0.162 -1.941 PPP6C protein phosphatase 6, catalytic subunit 9 -126948672 NM_002721 9q33.3 Hs.715605 16

G1/S transition of mitotic cell cycle

protein serine/threonine phosphatase activity

iron ion binding

protein binding

cytoplasm

cytosol

protein amino acid dephosphorylation

cell cycle

hydrolase activity

manganese ion binding

metal ion binding

 
226787_at -0.407 5.360 -3.336 4.437e-03 0.162 -1.941 ZNF18 zinc finger protein 18 17 -11821486 BF966015 17p11.2 Hs.370473 8

transcription factor activity

intracellular

nucleus

nucleolus

cytoplasm

Golgi apparatus

plasma membrane

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
243980_at 0.337 4.330 3.335 4.446e-03 0.162 -1.943 ZNF594 zinc finger protein 594 17 -5023554 AW978739 17p13 Hs.658402 5

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
203983_at -0.475 8.627 -3.335 4.452e-03 0.162 -1.944 TSNAX translin-associated factor X 1 229731021 NM_005999 1q42.1 Hs.96247 17

nucleus

cytoplasm

multicellular organismal development

spermatogenesis

protein transporter activity

cell differentiation

sequence-specific DNA binding

perinuclear region of cytoplasm

 
200597_at -0.577 7.237 -3.334 4.455e-03 0.162 -1.945 EIF3A eukaryotic translation initiation factor 3, subunit A 10 -120784530 AI123320 10q26 Hs.523299 38

formation of translation initiation complex

translation initiation factor activity

translation initiation factor activity

structural molecule activity

protein binding

nucleus

cytoplasm

cytosol

eukaryotic translation initiation factor 3 complex

 
204326_x_at -1.004 10.673 -3.334 4.460e-03 0.162 -1.946 MT1X metallothionein 1X 16 55273882 NM_002450 16q13 Hs.374950 18

copper ion binding

zinc ion binding

response to metal ion

cadmium ion binding

metal ion binding

 
200767_s_at -0.370 7.277 -3.333 4.469e-03 0.163 -1.947 FAM120A family with sequence similarity 120A 9 95253993 NM_014612 9q22.31 Hs.372003 Hs.707324 14

RNA binding

cytoplasm

plasma membrane

 
214279_s_at -1.617 9.481 -3.332 4.476e-03 0.163 -1.949 NDRG2 NDRG family member 2 14 -20554761, -20554761 W74452 14q11.2 Hs.525205 42

molecular_function

nucleus

cytoplasm

Golgi apparatus

centrosome

cytosol

multicellular organismal development

nervous system development

cell differentiation

perinuclear region of cytoplasm

 
206587_at -0.561 5.253 -3.331 4.485e-03 0.163 -1.951 CCT6B chaperonin containing TCP1, subunit 6B (zeta 2) 17 -30279050 NM_006584 17q12 Hs.73072 9

nucleotide binding

ATP binding

cytoplasm

protein folding

spermatogenesis

protein transporter activity

unfolded protein binding

chaperone-mediated protein complex assembly

 
225108_at -0.740 5.444 -3.331 4.486e-03 0.163 -1.951 AGPS alkylglycerone phosphate synthase 2 177965716 BF111719 2q31.2 Hs.516543 19

peroxisome

peroxisomal membrane

cytosol

alkylglycerone-phosphate synthase activity

lipid biosynthetic process

membrane

oxidoreductase activity

transferase activity

FAD binding

Ether lipid metabolism

Metabolic pathways

219250_s_at -0.892 5.099 -3.331 4.489e-03 0.163 -1.952 FLRT3 fibronectin leucine rich transmembrane protein 3 20 -14252642, -14252642 NM_013281 20p11 Hs.41296 9

receptor signaling protein activity

proteinaceous extracellular matrix

integral to plasma membrane

cell adhesion

biological_process

membrane

protein binding, bridging

 
217884_at -0.398 6.230 -3.330 4.493e-03 0.163 -1.952 NAT10 N-acetyltransferase 10 (GCN5-related) 11 34083686 NM_024662 11p13 Hs.577281 18

nucleotide binding

molecular_function

protein binding

ATP binding

nucleus

nucleolus

N-acetyltransferase activity

metabolic process

acyltransferase activity

transferase activity

 
220939_s_at -0.568 9.023 -3.330 4.494e-03 0.163 -1.952 DPP8 dipeptidyl-peptidase 8 15 -63525050, -63525050 NM_017743 15q22 Hs.591106 16

aminopeptidase activity

nucleus

cytoplasm

proteolysis

immune response

peptidase activity

serine-type peptidase activity

dipeptidyl-peptidase activity

membrane

 
232046_at -0.566 6.432 -3.330 4.500e-03 0.163 -1.954 KIAA1217 KIAA1217 10 24023680, 24537725 AU148164 10p12.2-p12.1 Hs.445885 5

molecular_function

cytoplasm

multicellular organismal development

embryonic skeletal system development

 
208072_s_at -0.598 8.209 -3.329 4.506e-03 0.163 -1.955 DGKD diacylglycerol kinase, delta 130kDa 2 233927891, 233961538 NM_003648 2q37.1 Hs.471675 14

nucleotide binding

diacylglycerol kinase activity

ATP binding

cytoplasm

plasma membrane

epidermal growth factor receptor signaling pathway

activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway

multicellular organismal development

zinc ion binding

response to organic substance

cytoplasmic membrane-bounded vesicle

cell growth

transferase activity

second-messenger-mediated signaling

diacylglycerol binding

protein homodimerization activity

diacylglycerol metabolic process

metal ion binding

protein heterodimerization activity

protein homooligomerization

Glycerolipid metabolism

Glycerophospholipid metabolism

Metabolic pathways

Phosphatidylinositol signaling system

208865_at -0.466 9.179 -3.329 4.509e-03 0.163 -1.955 CSNK1A1 casein kinase 1, alpha 1 5 -148855037 BG534245 5q32 Hs.529862 Hs.712555 53

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

cytosol

protein amino acid phosphorylation

Wnt receptor signaling pathway

transferase activity

Wnt signaling pathway

Hedgehog signaling pathway

202301_s_at -0.708 7.267 -3.328 4.512e-03 0.163 -1.956 RSRC2 arginine/serine-rich coiled-coil 2 12 -121555225, -121555225 BE396879 12q24.31 Hs.432996 4    
215951_at 0.324 5.136 3.326 4.530e-03 0.163 -1.960 TBC1D2B TBC1 domain family, member 2B 15 -76074381 AL137303 15q24.3-q25.1 Hs.719242 2

GTPase activator activity

Rab GTPase activator activity

intracellular

regulation of Rab GTPase activity

 
226268_at -0.843 6.008 -3.326 4.536e-03 0.164 -1.961 RAB21 RAB21, member RAS oncogene family 12 70434924 AI309554 12q21.1 Hs.524590 12

Golgi membrane

nucleotide binding

protein binding

GTP binding

endosome

endoplasmic reticulum

Golgi apparatus

small GTPase mediated signal transduction

protein transport

membrane

cytoplasmic vesicle membrane

cytoplasmic vesicle

early endosome membrane

 
229412_at -0.605 5.685 -3.325 4.540e-03 0.164 -1.962 TAF8 TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa 6 42126228 AA641254 6p21.1 Hs.520122 17

inner cell mass cell proliferation

DNA binding

protein binding

nucleus

transcription factor TFIID complex

cytoplasm

multicellular organismal development

transcription activator activity

cell differentiation

regulation of transcription

regulation of fat cell differentiation

positive regulation of transcription, DNA-dependent

 
208868_s_at -0.555 6.745 -3.325 4.545e-03 0.164 -1.963 GABARAPL1 GABA(A) receptor-associated protein like 1 12 10256755 BF125756 12p13.2 Hs.524250 18

protein binding

intracellular

cytoplasm

autophagic vacuole

endoplasmic reticulum

Golgi apparatus

microtubule

membrane

beta-tubulin binding

GABA receptor binding

Regulation of autophagy

211593_s_at -0.389 7.952 -3.322 4.570e-03 0.164 -1.968 MAST2 microtubule associated serine/threonine kinase 2 1 46041871 AB047005 1p34.1 Hs.319481 19

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

cytoskeleton

plasma membrane

protein amino acid phosphorylation

transferase activity

phosphatase binding

regulation of interleukin-12 biosynthetic process

spermatid differentiation

 
202776_at -0.501 7.875 -3.322 4.573e-03 0.164 -1.968 DNTTIP2 deoxynucleotidyltransferase, terminal, interacting protein 2 1 -94107923 NM_014597 1p22.1 Hs.85769 10

nucleus

regulation of transcription

 
227272_at -0.449 7.763 -3.321 4.580e-03 0.164 -1.970 C15orf52 chromosome 15 open reading frame 52 15 -38410944 BE673226 15q15.1 Hs.32433 3    
207057_at 1.488 6.095 3.320 4.589e-03 0.165 -1.972 SLC16A7 solute carrier family 16, member 7 (monocarboxylic acid transporter 2) 12 58369392 NM_004731 12q13 Hs.439643 8

pyruvate secondary active transmembrane transporter activity

membrane fraction

plasma membrane

integral to plasma membrane

transport

pyruvate transport

symporter activity

secondary active monocarboxylate transmembrane transporter activity

organic anion transport

 
225268_at -0.621 10.637 -3.320 4.592e-03 0.165 -1.972 KPNA4 karyopherin alpha 4 (importin alpha 3) 3 -161700655 AU144710 3q25.33 Hs.715552 53

protein binding

nucleus

nuclear pore

cytoplasm

NLS-bearing substrate import into nucleus

intracellular protein transport

protein transporter activity

 
226117_at 0.892 5.990 3.319 4.595e-03 0.165 -1.973 TIFA TRAF-interacting protein with forkhead-associated domain 4 -113416230 AA195074 4q25 Hs.310640 9

protein binding

I-kappaB kinase/NF-kappaB cascade

 
215884_s_at -0.616 8.157 -3.319 4.597e-03 0.165 -1.973 UBQLN2 ubiquilin 2 X 56606796 AK001029 Xp11.23-p11.1 Hs.179309 20

binding

nucleus

cytoplasm

plasma membrane

 
1557545_s_at 0.617 2.649 3.318 4.612e-03 0.165 -1.976 RNF165 ring finger protein 165 18 42168184 BF529886 18q21.1 Hs.501114 4

protein binding

zinc ion binding

metal ion binding

 
220094_s_at 0.496 8.746 3.318 4.612e-03 0.165 -1.976 CCDC90A coiled-coil domain containing 90A 6 -13898998 NM_022102 6p24.3-p23 Hs.214043 3

mitochondrion

membrane

integral to membrane

 
224614_at -0.516 6.007 -3.317 4.614e-03 0.165 -1.977 DYNC1LI2 dynein, cytoplasmic 1, light intermediate chain 2 16 -65312299 AK024863 16q22.1 Hs.369068 10

nucleotide binding

motor activity

ATP binding

cytoplasmic dynein complex

microtubule

 
233558_s_at -0.734 5.746 -3.316 4.625e-03 0.165 -1.979 C4orf41 chromosome 4 open reading frame 41 4 184817439 AK023390 4q35.1 Hs.443240 6    
235604_x_at 0.656 4.708 3.316 4.629e-03 0.165 -1.979 ZNF493 zinc finger protein 493 19 21371760, 21371760 AI758697 19p12 Hs.656558 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
203699_s_at -0.512 3.922 -3.316 4.629e-03 0.165 -1.980 DIO2 deiodinase, iodothyronine, type II 14 -79733621, -79733621 U53506 14q24.2-q24.3 Hs.202354 61

selenocysteine incorporation

thyroxine 5'-deiodinase activity

thyroid hormone generation

selenium binding

membrane

integral to membrane

thyroid hormone catabolic process

hormone biosynthetic process

oxidation reduction

 
212111_at -0.438 6.915 -3.316 4.629e-03 0.165 -1.980 STX12 syntaxin 12 1 27972280 AA628051 1p35-p34.1 Hs.523855 18

SNAP receptor activity

Golgi apparatus

intracellular protein transport

membrane

integral to membrane

vesicle-mediated transport

cholesterol efflux

membrane raft

phagocytic vesicle

protein stabilization

SNARE interactions in vesicular transport

221599_at 0.692 9.311 3.315 4.635e-03 0.165 -1.981 C11orf67 chromosome 11 open reading frame 67 11 77209855 BC002752 11q14.1 Hs.503357 3    
205583_s_at -0.524 7.057 -3.315 4.637e-03 0.165 -1.981 ALG13 asparagine-linked glycosylation 13 homolog (S. cerevisiae) X 110811068 NM_024810 Xq23 Hs.443061 14

N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity

endoplasmic reticulum

carbohydrate metabolic process

transferase activity, transferring hexosyl groups

carbohydrate binding

lipid glycosylation

N-Glycan biosynthesis

Metabolic pathways

237447_at 0.521 5.134 3.315 4.638e-03 0.165 -1.981 C22orf45 chromosome 22 open reading frame 45 22   BF509218 22q11.23 Hs.712771 2    
215716_s_at -0.585 7.194 -3.315 4.640e-03 0.165 -1.982 ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 12 -88505956 L14561 12q21.3 Hs.506276 38

nucleotide binding

magnesium ion binding

calcium-transporting ATPase activity

calcium ion binding

calmodulin binding

ATP binding

plasma membrane

integral to plasma membrane

ATP biosynthetic process

cation transport

calcium ion transport

metabolic process

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

Calcium signaling pathway

202495_at -0.715 7.788 -3.315 4.641e-03 0.165 -1.982 TBCC tubulin folding cofactor C 6 -42820211 NM_003192 6pter-p12.1 Hs.75064 6

binding

cytoskeleton

microtubule

post-chaperonin tubulin folding pathway

chaperone binding

 
204872_at -0.893 7.931 -3.314 4.643e-03 0.165 -1.982 TLE4 transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) 9 81376697 NM_007005 9q21.31 Hs.444213 12

molecular_function

nucleus

biological_process

Wnt receptor signaling pathway

regulation of transcription

 
218156_s_at -0.696 6.638 -3.314 4.643e-03 0.165 -1.982 TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) 17 -2172731 NM_018128 17p13.3 Hs.388170 5

protein binding

nucleus

nucleolus

ribosome assembly

 
235306_at 0.939 5.665 3.313 4.655e-03 0.165 -1.985 GIMAP8 GTPase, IMAP family member 8 7 149778894 AI611648 7q36.1 Hs.647121 7

nucleotide binding

GTP binding

mitochondrion

endoplasmic reticulum

Golgi apparatus

 
203811_s_at -1.590 7.287 -3.313 4.657e-03 0.165 -1.985 DNAJB4 DnaJ (Hsp40) homolog, subfamily B, member 4 1 78243223 NM_007034 1p31.1 Hs.13852 11

protein folding

response to unfolded protein

response to heat

heat shock protein binding

unfolded protein binding

 
211762_s_at -1.046 6.424 -3.312 4.668e-03 0.165 -1.987 KPNA2 karyopherin alpha 2 (RAG cohort 1, importin alpha 1) 17 63462309, -1713110 BC005978 17q24.2 Hs.594238 125

regulation of DNA recombination

M phase specific microtubule process

G2 phase of mitotic cell cycle

protein binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

DNA metabolic process

NLS-bearing substrate import into nucleus

intracellular protein transport

nuclear localization sequence binding

protein transporter activity

interspecies interaction between organisms

 
223244_s_at 0.377 11.718 3.312 4.669e-03 0.165 -1.987 NDUFA12 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 12 -93889240 AF217092 12q22 Hs.506374 9

NADH dehydrogenase activity

mitochondrion

mitochondrial inner membrane

transport

response to oxidative stress

respiratory gaseous exchange

NADH dehydrogenase (ubiquinone) activity

electron carrier activity

membrane

electron transport chain

respiratory chain

 
211729_x_at 0.408 8.716 3.311 4.678e-03 0.165 -1.989 BLVRA biliverdin reductase A 7 43764796 BC005902 7p14-cen Hs.488143 17

biliverdin reductase activity

binding

cytoplasm

zinc ion binding

oxidoreductase activity

heme catabolic process

metal ion binding

oxidation reduction

Porphyrin and chlorophyll metabolism

212222_at -0.550 8.865 -3.310 4.680e-03 0.165 -1.990 PSME4 proteasome (prosome, macropain) activator subunit 4 2 -53944707 AU143855 2p16.2 Hs.413801 30

binding

nucleus

cytosol

multicellular organismal development

spermatogenesis

nuclear speck

cell differentiation

protein complex

Proteasome

208671_at -0.687 9.911 -3.310 4.689e-03 0.165 -1.991 SERINC1 serine incorporator 1 6 -122806191 AF164794 6q22.31 Hs.146668 9

endoplasmic reticulum

endoplasmic reticulum membrane

plasma membrane

lipid metabolic process

phosphatidylserine metabolic process

sphingolipid metabolic process

phospholipid biosynthetic process

L-serine transmembrane transporter activity

L-serine transport

integral to membrane

positive regulation of transferase activity

 
1560382_at 0.306 5.326 3.310 4.689e-03 0.165 -1.991 GAB1 GRB2-associated binding protein 1 4 144477432 AK074381 4q31.21 Hs.618456 Hs.80720 69

SH3/SH2 adaptor activity

protein binding

cytosol

epidermal growth factor receptor signaling pathway

cell proliferation

insulin receptor signaling pathway

ErbB signaling pathway

Neurotrophin signaling pathway

Renal cell carcinoma

215293_s_at 0.288 6.207 3.309 4.694e-03 0.165 -1.992 PGAP2 post-GPI attachment to proteins 2 11 3775529, 3775624, 3775707, 3775765, 3785815, 3786341 AL049261 11p15.5 Hs.133968 5

Golgi membrane

endoplasmic reticulum

endoplasmic reticulum membrane

Golgi apparatus

GPI anchor biosynthetic process

protein transporter activity

membrane

integral to membrane

 
214429_at -0.509 7.651 -3.308 4.703e-03 0.165 -1.994 MTMR6 myotubularin related protein 6 13 -24718340 U47635 13q12 Hs.643702 17

protein serine/threonine phosphatase activity

protein tyrosine phosphatase activity

cellular_component

nucleus

nuclear envelope

cytoplasm

protein amino acid dephosphorylation

calcium-activated potassium channel activity

hydrolase activity

phosphatase activity

Fructose and mannose metabolism

Thiamine metabolism

Riboflavin metabolism

Metabolic pathways

209015_s_at -0.514 10.020 -3.308 4.703e-03 0.165 -1.994 DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 7 156822470, 156822471 BC002446 7q36.3 Hs.593923 Hs.719116 25

ATPase activator activity

DNA binding

nucleus

cytoplasm

protein folding

response to unfolded protein

transcription repressor activity

heat shock protein binding

negative regulation of caspase activity

intermediate filament organization

negative regulation of transcription, DNA-dependent

perinuclear region of cytoplasm

chaperone binding

 
203238_s_at 0.467 5.554 3.307 4.710e-03 0.165 -1.995 NOTCH3 Notch homolog 3 (Drosophila) 19 -15131443 NM_000435 19p13.2-p13.1 Hs.8546 96

receptor activity

calcium ion binding

protein binding

nucleus

plasma membrane

Notch signaling pathway

multicellular organismal development

integral to membrane

forebrain development

regulation of transcription

negative regulation of neuron differentiation

neuron fate commitment

regulation of developmental process

Dorso-ventral axis formation

Notch signaling pathway

208835_s_at -0.626 9.471 -3.307 4.711e-03 0.165 -1.996 LUC7L3 LUC7-like 3 (S. cerevisiae) 17 46151975 AW089673 17q21.33 Hs.130293 15

DNA binding

mRNA binding

protein binding

nucleus

mRNA processing

apoptosis

response to stress

RNA splicing

nuclear speck

 
221195_at -0.556 4.261 -3.307 4.714e-03 0.165 -1.996 RNFT1 ring finger protein, transmembrane 1 17 -55384504 NM_016125 17q23.1 Hs.531701 1

protein binding

zinc ion binding

membrane

integral to membrane

metal ion binding

 
210014_x_at 0.548 10.161 3.307 4.718e-03 0.165 -1.997 IDH3B isocitrate dehydrogenase 3 (NAD+) beta 20 -2587040 AF023266 20p13 Hs.436405 14

magnesium ion binding

isocitrate dehydrogenase (NAD+) activity

mitochondrion

mitochondrial matrix

tricarboxylic acid cycle

isocitrate metabolic process

visual perception

electron carrier activity

oxidoreductase activity

oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

manganese ion binding

response to stimulus

NAD or NADH binding

oxidation reduction

Citrate cycle (TCA cycle)

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

211808_s_at 0.311 5.027 3.305 4.729e-03 0.165 -1.999 CREBBP CREB binding protein 16 -3715056 U85962 16p13.3 Hs.459759 399

histone acetyltransferase complex

response to hypoxia

p53 binding

transcription factor activity

transcription coactivator activity

transcription coactivator activity

histone acetyltransferase activity

signal transducer activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

protein complex assembly

signal transduction

zinc ion binding

acetyltransferase activity

histone acetylation

transferase activity

N-terminal peptidyl-lysine acetylation

homeostatic process

interspecies interaction between organisms

positive regulation of transcription

positive regulation of transcription

metal ion binding

MyoD binding

Cell cycle

Wnt signaling pathway

Notch signaling pathway

TGF-beta signaling pathway

Adherens junction

Jak-STAT signaling pathway

Long-term potentiation

Melanogenesis

Huntington's disease

Pathways in cancer

Renal cell carcinoma

Prostate cancer

225677_at -0.530 7.799 -3.305 4.730e-03 0.165 -1.999 BCAP29 B-cell receptor-associated protein 29 7 107007657, 107008439 AW152589 7q22-q31 Hs.303787 12

endoplasmic reticulum

intracellular protein transport

apoptosis

membrane

integral to membrane

vesicle-mediated transport

 
207543_s_at -0.762 8.070 -3.305 4.731e-03 0.165 -1.999 P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 10 -74436987 NM_000917 10q21.3-q23.1 Hs.500047 Hs.593005 19

procollagen-proline 4-dioxygenase activity

binding

iron ion binding

mitochondrion

endoplasmic reticulum

endoplasmic reticulum lumen

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

L-ascorbic acid binding

metal ion binding

oxidation reduction

Arginine and proline metabolism

Metabolic pathways

202462_s_at -0.483 8.113 -3.305 4.732e-03 0.165 -2.000 DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 5 134122359 NM_014829 5q31.1 Hs.406549 9

nucleotide binding

RNA binding

helicase activity

ATP binding

nucleus

mRNA processing

ATP-dependent helicase activity

RNA splicing

Cajal body

nuclear speck

hydrolase activity

 
205331_s_at 0.349 7.232 3.305 4.733e-03 0.165 -2.000 REEP2 receptor accessory protein 2 5 137802674 NM_016606 5q31 Hs.416090 10

membrane

integral to membrane

 
224870_at 0.668 9.168 3.305 4.735e-03 0.165 -2.000 KIAA0114 KIAA0114 4 53273377 BG255416 4q12 Hs.17719 4    
207812_s_at -0.579 7.617 -3.305 4.736e-03 0.165 -2.000 GORASP2 golgi reassembly stacking protein 2, 55kDa 2 171493956 NM_015530 2q31.1-q31.2 Hs.431317 16

protein binding

Golgi apparatus

Golgi medial cisterna

Golgi organization

membrane

 
236154_at -0.873 7.955 -3.304 4.740e-03 0.165 -2.001 QKI quaking homolog, KH domain RNA binding (mouse) 6 163755664, 163755664 R41907 6q26 6q26-q27 Hs.510324 Hs.593520 23

RNA binding

protein binding

nucleus

nucleolus

cytoplasm

plasma membrane

mRNA processing

regulation of translation

transport

multicellular organismal development

RNA splicing

SH3 domain binding

cell differentiation

mRNA transport

 
1555618_s_at -1.046 6.596 -3.304 4.745e-03 0.165 -2.002 SAE1 SUMO1 activating enzyme subunit 1 19 52325919, 52325954, 52325971 AF110956 19q13.32 Hs.515500 20

ubiquitin activating enzyme activity

nucleus

protein modification process

protein C-terminus binding

protein C-terminus binding

enzyme activator activity

metabolic process

protein ubiquitination

ligase activity

modification-dependent protein catabolic process

ATP-dependent protein binding

protein heterodimerization activity

Ubiquitin mediated proteolysis

221276_s_at -0.775 9.068 -3.303 4.751e-03 0.165 -2.003 SYNC syncoilin, intermediate filament protein 1 -32918093 NM_030786 1p34.3-p33 Hs.712631 6

structural molecule activity

protein binding

cytoplasm

cytosol

intermediate filament

Z disc

sarcolemma

intermediate filament-based process

synapse

perinuclear region of cytoplasm

 
231035_s_at -1.615 5.277 -3.303 4.752e-03 0.165 -2.003 OTUD1 OTU domain containing 1 10 23768203 AI697976 10p12.2 Hs.499042 4    
215075_s_at -0.570 6.789 -3.303 4.756e-03 0.165 -2.004 GRB2 growth factor receptor-bound protein 2 17 -70825751, -70825751 L29511 17q24-q25 Hs.444356 Hs.708119 438

SH3/SH2 adaptor activity

epidermal growth factor receptor binding

Golgi apparatus

cytosol

cytosol

epidermal growth factor receptor signaling pathway

Ras protein signal transduction

Ras protein signal transduction

cell-cell signaling

insulin receptor signaling pathway

insulin receptor substrate binding

interspecies interaction between organisms

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

Dorso-ventral axis formation

Focal adhesion

Gap junction

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Neurotrophin signaling pathway

Insulin signaling pathway

GnRH signaling pathway

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Endometrial cancer

Glioma

Prostate cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Non-small cell lung cancer

239898_x_at 0.409 5.538 3.303 4.756e-03 0.165 -2.004 ZNF286A zinc finger protein 286A 17 15543615 AI498484 17p11.2 Hs.585799 Hs.659318 7

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
218184_at -0.667 6.485 -3.303 4.757e-03 0.165 -2.004 TULP4 tubby like protein 4 6 158653679 NM_020245 6q25-q26 Hs.486993 7

transcription factor activity

protein binding

cellular_component

cytoplasm

regulation of transcription, DNA-dependent

intracellular signaling cascade

response to nutrient

modification-dependent protein catabolic process

 
221883_at -0.567 6.012 -3.302 4.761e-03 0.165 -2.005 PKNOX1 PBX/knotted 1 homeobox 1 21 43267711 AA133342 21q22.3 Hs.431043 25

angiogenesis

specific RNA polymerase II transcription factor activity

RNA polymerase II transcription factor activity, enhancer binding

protein binding

nucleus

transcription factor complex

cytoplasm

hemopoiesis

T cell differentiation

erythrocyte differentiation

camera-type eye development

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

protein heterodimerization activity

 
219026_s_at -0.535 4.301 -3.301 4.770e-03 0.165 -2.007 RASAL2 RAS protein activator like 2 1 176329486, 176577228 NM_004841 1q24 Hs.549729 Hs.715627 11

Ras GTPase activator activity

intracellular

signal transduction

regulation of small GTPase mediated signal transduction

 
48659_at 0.336 6.612 3.301 4.774e-03 0.165 -2.008 MIIP migration and invasion inhibitory protein 1 12002098 W60802 1p36.22 Hs.8595 4    
216439_at 0.363 6.672 3.301 4.774e-03 0.165 -2.008 TNK2 tyrosine kinase, non-receptor, 2 3 -197074632, -197074632 AK024904 3q29 Hs.518513 37

nucleotide binding

magnesium ion binding

non-membrane spanning protein tyrosine kinase activity

GTPase inhibitor activity

protein binding

ATP binding

plasma membrane

protein amino acid phosphorylation

small GTPase mediated signal transduction

transferase activity

positive regulation of peptidyl-tyrosine phosphorylation

 
211578_s_at -0.497 4.928 -3.300 4.779e-03 0.165 -2.009 RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 17 55325224 M60725 17q23.1 Hs.463642 123

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

cytosol

protein amino acid phosphorylation

signal transduction

transferase activity

synaptosome

cell junction

synapse

ErbB signaling pathway

mTOR signaling pathway

TGF-beta signaling pathway

Fc gamma R-mediated phagocytosis

Insulin signaling pathway

Acute myeloid leukemia

216048_s_at -0.504 4.799 -3.300 4.786e-03 0.165 -2.010 RHOBTB3 Rho-related BTB domain containing 3 5 95092605 AK023621 5q15 Hs.445030 13

protein binding

ATP binding

ATPase activity

Rab GTPase binding

retrograde transport, endosome to Golgi

 
213820_s_at 0.317 4.770 3.299 4.789e-03 0.165 -2.010 STARD5 StAR-related lipid transfer (START) domain containing 5 15 -79392061 T54159 15q26 Hs.513075 12

cytosol

steroid biosynthetic process

lipid transport

lipid binding

 
225395_s_at -0.449 7.338 -3.299 4.792e-03 0.165 -2.011 FAM120AOS family with sequence similarity 120A opposite strand 9 -95248602 AI309997 9q22.31 Hs.350364 Hs.709859 3    
212254_s_at -0.414 10.289 -3.298 4.801e-03 0.165 -2.013 DST dystonin 6 -56587338, -56576527, -56430743, -56430743, -56430743, -56430743, -56430743 AI798790 6p12.1 Hs.631992 Hs.669931 48

actin binding

integrin binding

calcium ion binding

protein binding

protein binding

basement membrane

cytoplasm

cytoplasm

cytoskeleton

cell cycle arrest

cell adhesion

integrin-mediated signaling pathway

protein C-terminus binding

cytoplasmic membrane-bounded vesicle

actin cytoskeleton organization

hemidesmosome

intermediate filament cytoskeleton organization

intermediate filament cytoskeleton organization

intermediate filament cytoskeleton organization

actin filament binding

 
1556988_s_at -0.410 6.916 -3.298 4.802e-03 0.165 -2.013 CHD1L chromodomain helicase DNA binding protein 1-like 1 145180914 BE220618 1q12 Hs.191164 12

nucleotide binding

DNA binding

helicase activity

ATP binding

nucleus

ATP-dependent helicase activity

hydrolase activity

 
1570035_at 0.514 3.708 3.297 4.808e-03 0.166 -2.014 TBC1D10A TBC1 domain family, member 10A 22 -29017978 BC007908 22q12.1-qter Hs.655273 13

Rab GTPase activator activity

protein binding

intracellular

microvillus

biological_process

PDZ domain binding

regulation of Rab GTPase activity

 
219806_s_at -0.649 5.718 -3.297 4.812e-03 0.166 -2.015 C11orf75 chromosome 11 open reading frame 75 11 -92851286 NM_020179 11q13.3-q23.3 Hs.438064 3

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
234851_at 0.333 4.052 3.297 4.816e-03 0.166 -2.016 IGL@ immunoglobulin lambda locus 22   AJ275399 22q11.1-q11.2 Hs.449585 Hs.561078 20    
221502_at -0.778 10.595 -3.297 4.817e-03 0.166 -2.016 KPNA3 karyopherin alpha 3 (importin alpha 4) 13 -49171444 AL120704 13q14.3 Hs.527919 61

protein binding

nucleus

nuclear pore

cytoplasm

protein complex assembly

NLS-bearing substrate import into nucleus

intracellular protein transport

nuclear localization sequence binding

protein transporter activity

 
223904_at -1.106 6.778 -3.296 4.819e-03 0.166 -2.016 PRKAG3 protein kinase, AMP-activated, gamma 3 non-catalytic subunit 2 -219395349 AF214519 2q35 Hs.591634 13

AMP-activated protein kinase activity

glycogen biosynthetic process

fatty acid biosynthetic process

protein kinase cascade

glucose transport

protein kinase binding

Insulin signaling pathway

Adipocytokine signaling pathway

Hypertrophic cardiomyopathy (HCM)

219963_at -0.519 10.097 -3.296 4.822e-03 0.166 -2.017 DUSP13 dual specificity phosphatase 13 10 -76524197, -76524195 NM_016364 10q22.2 Hs.178170 9

protein tyrosine phosphatase activity

protein amino acid dephosphorylation

meiosis

spermatogenesis

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

 
208857_s_at -0.466 10.307 -3.294 4.839e-03 0.166 -2.020 PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 6 150112523 M93008 6q24-q25 Hs.279257 25

protein-L-isoaspartate (D-aspartate) O-methyltransferase activity

cellular_component

cytoplasm

endoplasmic reticulum

protein modification process

protein amino acid methylation

methyltransferase activity

transferase activity

protein repair

identical protein binding

 
1555326_a_at -0.768 4.830 -3.294 4.843e-03 0.166 -2.021 ADAM9 ADAM metallopeptidase domain 9 (meltrin gamma) 8 38973661, 38973661 AF495383 8p11.22 Hs.591852 36

activation of MAPKK activity

metalloendopeptidase activity

protein kinase C binding

integrin binding

integrin binding

integrin binding

collagen binding

extracellular region

extracellular space

cytoplasm

plasma membrane

proteolysis

response to oxidative stress

cell-matrix adhesion

transforming growth factor beta receptor signaling pathway

integrin-mediated signaling pathway

peptidase activity

zinc ion binding

cell surface

response to manganese ion

integral to membrane

SH3 domain binding

SH3 domain binding

keratinocyte differentiation

intrinsic to external side of plasma membrane

positive regulation of cell adhesion mediated by integrin

cell-cell adhesion mediated by integrin

positive regulation of macrophage fusion

response to tumor necrosis factor

monocyte activation

response to hydrogen peroxide

laminin binding

metal ion binding

positive regulation of protein secretion

positive regulation of membrane protein ectodomain proteolysis

PMA-inducible membrane protein ectodomain proteolysis

response to glucocorticoid stimulus

positive regulation of keratinocyte migration

response to calcium ion

 
208777_s_at -0.420 8.974 -3.294 4.843e-03 0.166 -2.021 PSMD11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 17 27795614 AF001212 17q11.2 Hs.655396 41

proteasome complex

protein binding

cytosol

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

204772_s_at -0.611 5.919 -3.294 4.843e-03 0.166 -2.021 TTF1 transcription termination factor, RNA polymerase I 9 -134240757 NM_007344 9q34.13 Hs.54780 18

DNA binding

transcription termination factor activity

nucleus

nucleoplasm

nucleolus

transcription termination

negative regulation of DNA replication

regulation of transcription

 
224851_at 0.583 4.495 3.293 4.856e-03 0.166 -2.023 CDK6 cyclin-dependent kinase 6 7 -92072172, -92072172 AW274756 7q21-q22 Hs.119882 95

G1 phase of mitotic cell cycle

nucleotide binding

cyclin-dependent protein kinase holoenzyme complex

ruffle

positive regulation of cell-matrix adhesion

cyclin-dependent protein kinase activity

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

regulation of gene expression

regulation of gene expression

transferase activity

hemopoiesis

cyclin binding

gliogenesis

cell dedifferentiation

regulation of erythrocyte differentiation

negative regulation of osteoblast differentiation

negative regulation of cell cycle

positive regulation of fibroblast proliferation

negative regulation of epithelial cell proliferation

cell division

Cell cycle

p53 signaling pathway

Pathways in cancer

Pancreatic cancer

Glioma

Melanoma

Chronic myeloid leukemia

Small cell lung cancer

Non-small cell lung cancer

225342_at 0.927 5.487 3.292 4.858e-03 0.166 -2.024 AK3L1 adenylate kinase 3-like 1 1 65385819, 65386100, 65386473 AK026966 1p31.3 Hs.10862 Hs.592601 10

nucleotide binding

adenylate kinase activity

ATP binding

GTP binding

mitochondrion

mitochondrial matrix

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

transferase activity

Purine metabolism

Metabolic pathways

222479_s_at -0.469 8.021 -3.292 4.864e-03 0.166 -2.025 DYNC1LI1 dynein, cytoplasmic 1, light intermediate chain 1 3 -32542470 AK001081 3p22.3 Hs.529495 11

nucleotide binding

motor activity

ATP binding

microtubule

dynein complex

 
1562299_at 0.303 3.018 3.290 4.879e-03 0.166 -2.028 C14orf25 chromosome 14 open reading frame 25 14   BC038110 14q21.1 Hs.659936 2    
202501_at -0.761 7.499 -3.290 4.882e-03 0.166 -2.028 MAPRE2 microtubule-associated protein, RP/EB family, member 2 18 30810889, 30812205, 30875321 NM_014268 18q12.1-q12.2 Hs.532824 27

cytoplasm

microtubule

cell cycle

mitosis

signal transduction

microtubule binding

cell proliferation

cell division

 
222658_s_at -0.348 6.310 -3.290 4.883e-03 0.166 -2.028 APTX aprataxin 9 -32962607, -32962607, -32962607, -32962607, -32962607 BC001628 9p13.3 Hs.20158 41

single strand break repair

chromatin

chromatin binding

damaged DNA binding

double-stranded DNA binding

double-stranded RNA binding

intracellular

nucleus

nucleoplasm

nucleolus

response to DNA damage stimulus

cell death

zinc ion binding

phosphoglycolate phosphatase activity

hydrolase activity

regulation of protein stability

DNA 5'-adenosine monophosphate hydrolase activity

response to hydrogen peroxide

metal ion binding

protein N-terminus binding

 
234257_at 0.473 4.401 3.290 4.886e-03 0.166 -2.029 TNS3 tensin 3 7 -47281276 AL137468 7p12.3 Hs.520814 12

protein binding

nucleus

nucleolus

cytoplasm

plasma membrane

focal adhesion

positive regulation of cell proliferation

cell migration

cell junction

lung alveolus development

 
223982_s_at -0.417 8.445 -3.289 4.890e-03 0.166 -2.030 PNPLA8 patatin-like phospholipase domain containing 8 7 -107899306 AB041261 7q31 Hs.617340 13

lysophospholipase activity

binding

ATP binding

intracellular

intracellular

membrane fraction

membrane fraction

cytoplasm

peroxisomal membrane

peroxisomal membrane

endoplasmic reticulum

Golgi apparatus

fatty acid metabolic process

fatty acid metabolic process

metabolic process

membrane

integral to membrane

lipid catabolic process

hydrolase activity

calcium-independent phospholipase A2 activity

calcium-independent phospholipase A2 activity

perinuclear region of cytoplasm

 
204783_at -1.739 7.532 -3.289 4.891e-03 0.166 -2.030 MLF1 myeloid leukemia factor 1 3 159771646 AI911434 3q25.1 Hs.85195 14

myeloid progenitor cell differentiation

DNA binding

nucleus

cytoplasm

transcription

cell cycle

cell cycle arrest

multicellular organismal development

protein domain specific binding

cell differentiation

 
229328_at 0.483 4.274 3.287 4.910e-03 0.167 -2.033 ZNF540 zinc finger protein 540 19 42734147 T90358 19q13.12 Hs.121283 5

DNA binding

intracellular

nucleus

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
215015_at 0.319 5.551 3.287 4.914e-03 0.167 -2.034 CCDC64 coiled-coil domain containing 64 12 118912030 AA319460 12q24.23 Hs.369763      
224597_at -0.460 10.927 -3.286 4.918e-03 0.167 -2.035 LOC647979 hypothetical LOC647979 20 -34096955 AV729406 20q11.23 Hs.649310 Hs.718413 2    
203689_s_at -0.593 6.098 -3.286 4.919e-03 0.167 -2.035 FMR1 fragile X mental retardation 1 X 146801200 AI743037 Xq27.3 Hs.103183 211

mRNA binding

protein binding

soluble fraction

nucleus

nucleoplasm

nucleolus

cytoplasm

transport

polysomal ribosome

mRNA transport

 
218649_x_at -0.809 8.146 -3.286 4.922e-03 0.167 -2.036 SDCCAG1 serologically defined colon cancer antigen 1 14 -49320281 NM_004713 14q22 Hs.655964 8

nucleus

cytoplasm

 
210094_s_at -0.460 7.207 -3.285 4.929e-03 0.167 -2.037 PARD3 par-3 partitioning defective 3 homolog (C. elegans) 10 -34440102 AF196186 10p11.21 Hs.131489 40

protein binding

cytoplasm

plasma membrane

tight junction

tight junction

cell cortex

protein complex assembly

cell cycle

establishment or maintenance of cell polarity

activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway

axonogenesis

asymmetric cell division

cell junction

Chemokine signaling pathway

Neuroactive ligand-receptor interaction

Endocytosis

Adherens junction

Tight junction

1558168_at 0.300 4.033 3.285 4.934e-03 0.167 -2.038 C3orf47 chromosome 3 open reading frame 47 3 130517803 AL040547 3q21.3 Hs.450096 Hs.75307 5    
208652_at -0.512 9.460 -3.284 4.938e-03 0.167 -2.039 PPP2CA protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform 5 -133560046 BC000400 5q31.1 Hs.105818 105

protein phosphatase type 2A complex

inactivation of MAPK activity

chromosome, centromeric region

phosphoprotein phosphatase activity

iron ion binding

protein binding

soluble fraction

nucleus

cytoplasm

mitochondrion

spindle

cytosol

plasma membrane

regulation of DNA replication

protein amino acid dephosphorylation

ceramide metabolic process

induction of apoptosis

mesoderm development

RNA splicing

response to organic substance

hydrolase activity

second-messenger-mediated signaling

regulation of Wnt receptor signaling pathway

manganese ion binding

regulation of cell adhesion

negative regulation of cell growth

regulation of growth

negative regulation of tyrosine phosphorylation of Stat3 protein

regulation of transcription

regulation of cell differentiation

metal ion binding

protein heterodimerization activity

Wnt signaling pathway

TGF-beta signaling pathway

Tight junction

Long-term depression

203487_s_at -0.584 8.120 -3.284 4.938e-03 0.167 -2.039 ARMC8 armadillo repeat containing 8 3 139388837, 139388837 NM_015396 3q22.3 Hs.719108 4

binding

 
225550_at -0.958 7.294 -3.284 4.942e-03 0.167 -2.039 C1orf71 chromosome 1 open reading frame 71 1 244796261, 244796261 AV700816 1q44 Hs.368353 9

membrane

integral to membrane

protein complex

 
217938_s_at -0.517 9.082 -3.284 4.943e-03 0.167 -2.040 KCMF1 potassium channel modulatory factor 1 2 85051741 NM_020122 2p11.2 Hs.654968 7

intracellular

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
201032_at -0.594 9.957 -3.283 4.957e-03 0.167 -2.042 BLCAP bladder cancer associated protein 20 -35579232 NM_006698 20q11.2-q12 Hs.472651 Hs.718404 9

membrane

integral to membrane

 
224974_at -0.652 5.141 -3.282 4.962e-03 0.167 -2.043 SUDS3 suppressor of defective silencing 3 homolog (S. cerevisiae) 12 117298740 AK024460 12q24.23 Hs.416630 Hs.602312 9

protein binding

negative regulation of transcription

chromatin modification

Sin3 complex

histone deacetylase binding

 
205116_at -0.536 6.684 -3.282 4.964e-03 0.167 -2.043 LAMA2 laminin, alpha 2 6 129245978 NM_000426 6q22-q23 Hs.200841 40

receptor binding

structural molecule activity

extracellular region

basal lamina

laminin-1 complex

muscle organ development

regulation of cell adhesion

regulation of cell migration

positive regulation of synaptic transmission, cholinergic

sarcolemma

regulation of embryonic development

Focal adhesion

ECM-receptor interaction

Pathways in cancer

Small cell lung cancer

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

222576_s_at 0.312 5.392 3.282 4.966e-03 0.167 -2.044 EIF2C1 eukaryotic translation initiation factor 2C, 1 1 36121396 AW071829 1p35-p34 Hs.22867 26

cytoplasmic mRNA processing body

nuclear-transcribed mRNA catabolic process

RNA binding

protein binding

cytoplasm

regulation of translation

gene silencing by RNA

gene silencing by miRNA, negative regulation of translation

regulation of transcription

 
223140_s_at -0.459 7.950 -3.281 4.973e-03 0.167 -2.045 DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 3 -155476150 AF217190 3p13-q23 Hs.446270 13

nucleotide binding

nucleic acid binding

helicase activity

protein binding

ATP binding

nucleus

cytoplasm

ATP-dependent helicase activity

hydrolase activity

 
204342_at -0.647 6.424 -3.279 4.993e-03 0.167 -2.049 SLC25A24 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24 1 -108478969, -108478969 NM_013386 1p13.3 Hs.656870 4

binding

calcium ion binding

mitochondrion

mitochondrial inner membrane

transport

membrane

integral to membrane

 
235082_at -0.624 4.866 -3.279 4.994e-03 0.167 -2.049 PCNX pecanex homolog (Drosophila) 14 70443874 BG024649 14q24.2 Hs.446559 10

membrane

integral to membrane

 
208803_s_at -0.685 5.248 -3.278 5.000e-03 0.167 -2.050 SRP72 signal recognition particle 72kDa 4 57028518 AF069765 4q11 Hs.237825 18

signal recognition particle binding

binding

cytoplasm

signal recognition particle, endoplasmic reticulum targeting

SRP-dependent cotranslational protein targeting to membrane

7S RNA binding

response to drug

Protein export

218530_at -0.644 8.336 -3.277 5.013e-03 0.167 -2.052 FHOD1 formin homology 2 domain containing 1 16 -65820792 NM_013241 16q22 Hs.95231 25

actin binding

protein binding

nucleus

cytoplasm

cytoskeleton

cellular component organization

actin cytoskeleton organization

 
201155_s_at 0.418 9.746 3.277 5.017e-03 0.167 -2.053 MFN2 mitofusin 2 1 11962824 NM_014874 1p36.22 Hs.376681 43

nucleotide binding

blastocyst formation

GTPase activity

protein binding

GTP binding

mitochondrion

cytosol

protein targeting to mitochondrion

mitochondrial membrane organization

cell cycle arrest

mitochondrial fusion

microtubule cytoskeleton

membrane

integral to membrane

hydrolase activity

intrinsic to mitochondrial outer membrane

negative regulation of Ras protein signal transduction

camera-type eye morphogenesis

negative regulation of smooth muscle cell proliferation

mitochondrion localization

 
229689_s_at -0.733 3.574 -3.277 5.018e-03 0.167 -2.053 DLG5 discs, large homolog 5 (Drosophila) 10 -79220554 AV721789 10q23 Hs.652690 49

protein binding

intracellular

cytoplasm

plasma membrane

cell-cell adherens junction

intracellular signaling cascade

negative regulation of cell proliferation

cell-cell adhesion

cell junction

receptor signaling complex scaffold activity

regulation of apoptosis

 
222125_s_at 0.390 6.465 3.276 5.020e-03 0.167 -2.054 P4HTM prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) 3 49002344 BC000580 3p21.31 Hs.654944 9

iron ion binding

calcium ion binding

endoplasmic reticulum

membrane

integral to membrane

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

L-ascorbic acid binding

oxidation reduction

 
202374_s_at -0.350 6.766 -3.276 5.021e-03 0.167 -2.054 RAB3GAP2 RAB3 GTPase activating protein subunit 2 (non-catalytic) 1 -218388232 NM_012414 1q41 Hs.654849 Hs.708165 14

GTPase activator activity

protein binding

soluble fraction

cytoplasm

intracellular protein transport

regulation of GTPase activity

protein heterodimerization activity

 
243864_at -0.408 4.085 -3.276 5.027e-03 0.167 -2.055 CCDC80 coiled-coil domain containing 80 3 -113806098 AA994712 3q13.2 Hs.477128 10

fibronectin binding

extracellular region

basement membrane

interstitial matrix

heparin binding

positive regulation of cell-substrate adhesion

extracellular matrix organization

intracellular membrane-bounded organelle

 
201831_s_at -0.965 8.187 -3.276 5.027e-03 0.167 -2.055 USO1 USO1 homolog, vesicle docking protein (yeast) 4 76868852 BE875592 4q21.1 Hs.292689 34

Golgi membrane

protein binding

cytoplasm

microsome

Golgi apparatus

cytosol

intracellular protein transport

protein transporter activity

membrane

vesicle-mediated transport

vesicle fusion with Golgi apparatus

perinuclear region of cytoplasm

 
217364_x_at -0.637 5.559 -3.276 5.027e-03 0.167 -2.055 EIF3J eukaryotic translation initiation factor 3, subunit J 15 42616557 AL031313 15q21.1 Hs.404056 19

translation initiation factor activity

protein binding

cytoplasm

cytosol

eukaryotic translation initiation factor 3 complex

translational initiation

 
224871_at -0.472 7.753 -3.275 5.039e-03 0.168 -2.057 TPRG1L tumor protein p63 regulated 1-like 1 3531415 AK025464 1p36.32 Hs.20529 5

synaptic vesicle

cell junction

cytoplasmic vesicle

synapse

 
223334_at 0.598 10.036 3.274 5.043e-03 0.168 -2.058 TMEM126A transmembrane protein 126A 11 85036692 AL136941 11q14.1 Hs.533725 8

molecular_function

mitochondrion

biological_process

membrane

integral to membrane

 
241389_at 0.282 6.607 3.274 5.044e-03 0.168 -2.058 CHRNB2 cholinergic receptor, nicotinic, beta 2 (neuronal) 1 152806880 BE261002 1q21.3 Hs.2306 59

conditioned taste aversion

response to hypoxia

nicotinic acetylcholine-activated cation-selective channel activity

ion channel activity

extracellular ligand-gated ion channel activity

protein binding

plasma membrane

nicotinic acetylcholine-gated receptor-channel complex

ion transport

calcium ion transport

smooth muscle contraction

signal transduction

synaptic transmission, cholinergic

visual perception

sensory perception of sound

memory

locomotory behavior

visual learning

external side of plasma membrane

acetylcholine receptor activity

integral to membrane

sensory perception of pain

vestibulocochlear nerve development

optic nerve morphogenesis

lateral geniculate nucleus development

central nervous system projection neuron axonogenesis

cell junction

positive regulation of B cell proliferation

positive regulation of synaptic transmission, dopaminergic

positive regulation of dopamine secretion

behavioral response to nicotine

social behavior

regulation of dopamine metabolic process

B cell activation

response to cocaine

regulation of circadian sleep/wake cycle, REM sleep

regulation of circadian sleep/wake cycle, non-REM sleep

synapse

postsynaptic membrane

response to ethanol

negative regulation of action potential

regulation of dendrite morphogenesis

cognition

membrane depolarization

regulation of synaptogenesis

synaptic transmission involved in micturition

 
241458_at -0.371 4.612 -3.273 5.060e-03 0.168 -2.061 SETD2 SET domain containing 2 3 -47032903 AI868267 3p21.31 Hs.517941 18

DNA binding

protein binding

nucleus

methyltransferase activity

oxidoreductase activity

chromatin modification

transferase activity

histone-lysine N-methyltransferase activity

regulation of transcription

transition metal ion binding

Lysine degradation

222510_s_at -0.541 6.259 -3.272 5.063e-03 0.168 -2.061 MKRN2 makorin ring finger protein 2 3 12573593 AI809203 3p25 Hs.591666 5

molecular_function

nucleic acid binding

protein binding

intracellular

biological_process

zinc ion binding

metal ion binding

 
222800_at 0.288 5.112 3.271 5.075e-03 0.168 -2.064 TRNAU1AP tRNA selenocysteine 1 associated protein 1 1 28752115 BC000680 1p35.3 Hs.533626 5

nucleotide binding

selenocysteine incorporation

RNA binding

nucleus

cytoplasm

translation

 
222408_s_at -0.522 8.246 -3.270 5.086e-03 0.168 -2.066 YPEL5 yippee-like 5 (Drosophila) 2 30223253 BC000836 2p23.1 Hs.515890 6    
228342_s_at -1.046 8.465 -3.270 5.092e-03 0.168 -2.067 ALPK3 alpha-kinase 3 15 83160914 AA843297 15q25.2 Hs.459183 5

protein serine/threonine kinase activity

ATP binding

nucleus

protein amino acid phosphorylation

multicellular organismal development

heart development

kinase activity

transferase activity

 
242586_at -0.800 6.623 -3.269 5.094e-03 0.168 -2.067 FSD1L fibronectin type III and SPRY domain containing 1-like 9 107250135, 107250135, 107250145 H07986 9q31 Hs.136901 4

molecular_function

cellular_component

biological_process

 
207614_s_at -0.555 7.395 -3.269 5.099e-03 0.168 -2.068 CUL1 cullin 1 7 148026865 NM_003592 7q36.1 Hs.146806 72

G1/S transition of mitotic cell cycle

protein binding

nucleoplasm

cytosol

ubiquitin-dependent protein catabolic process

apoptosis

cell cycle arrest

negative regulation of cell proliferation

induction of apoptosis by intracellular signals

organ morphogenesis

SCF ubiquitin ligase complex

ubiquitin protein ligase binding

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

Wnt signaling pathway

TGF-beta signaling pathway

204681_s_at 0.730 5.967 3.267 5.119e-03 0.169 -2.072 RAPGEF5 Rap guanine nucleotide exchange factor (GEF) 5 7 -22124432 NM_012294 7p15.3 Hs.174768 Hs.713217 10

intracellular

nucleus

nervous system development

Rap guanyl-nucleotide exchange factor activity

GTP-dependent protein binding

regulation of small GTPase mediated signal transduction

 
202984_s_at -0.504 6.697 -3.267 5.122e-03 0.169 -2.072 BAG5 BCL2-associated athanogene 5 14 -103092641, -103092641, -103092641 AA457021 14q32.33 Hs.5443 10

protein binding

protein folding

apoptosis

 
210284_s_at -0.599 6.650 -3.267 5.124e-03 0.169 -2.072 MAP3K7IP2 mitogen-activated protein kinase kinase kinase 7 interacting protein 2 6 149680755 AF241230 6q25.1-q25.3 Hs.269775 39

protein binding

intracellular

cytoplasm

cytosol

cytosol

zinc ion binding

membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of I-kappaB kinase/NF-kappaB cascade

metal ion binding

MAPK signaling pathway

Toll-like receptor signaling pathway

222542_x_at -1.025 6.701 -3.265 5.138e-03 0.169 -2.075 CABC1 chaperone, ABC1 activity of bc1 complex homolog (S. pombe) 1 225194560 BF724826 1q42.13 Hs.118241 10

nucleotide binding

ATP binding

mitochondrion

cell death

kinase activity

transferase activity

 
206562_s_at -0.781 6.685 -3.265 5.141e-03 0.169 -2.075 CSNK1A1 casein kinase 1, alpha 1 5 -148855037 NM_001892 5q32 Hs.529862 Hs.712555 53

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

cytosol

protein amino acid phosphorylation

Wnt receptor signaling pathway

transferase activity

Wnt signaling pathway

Hedgehog signaling pathway

201736_s_at -0.419 6.603 -3.264 5.148e-03 0.169 -2.077 MARCH6 membrane-associated ring finger (C3HC4) 6 5 10406827 BF000409 5p15.2 Hs.432862 8

endoplasmic reticulum

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
233750_s_at -0.761 5.204 -3.264 5.155e-03 0.169 -2.078 C1orf25 chromosome 1 open reading frame 25 1 -183353840 AL109865 1q25.2 Hs.107149 6

RNA binding

tRNA (guanine-N2-)-methyltransferase activity

intracellular

behavior

tRNA processing

zinc ion binding

metal ion binding

 
201637_s_at -0.452 10.494 -3.262 5.169e-03 0.170 -2.080 FXR1 fragile X mental retardation, autosomal homolog 1 3 182113145 NM_005087 3q28 Hs.478407 30

RNA binding

nucleolus

cytoplasm

polysome

apoptosis

multicellular organismal development

muscle organ development

cell differentiation

 
205150_s_at -0.685 5.425 -3.262 5.174e-03 0.170 -2.081 KIAA0644 KIAA0644 gene product 7 -28959498 AV724192 7p14.3 Hs.719240 4

protein binding

membrane

integral to membrane

 
1559520_at 0.352 2.784 3.261 5.180e-03 0.170 -2.082 GYPA glycophorin A (MNS blood group) 4 -145249905 AL833104 4q28.2-q31.1 Hs.434973 60

membrane fraction

plasma membrane

integral to membrane

identical protein binding

Hematopoietic cell lineage

213330_s_at -0.610 7.969 -3.261 5.181e-03 0.170 -2.082 STIP1 stress-induced-phosphoprotein 1 11 63710162 BE886580 11q13 Hs.337295 34

protein binding

nucleus

cytoplasm

Golgi apparatus

response to stress

Prion diseases

224839_s_at 0.959 7.443 3.261 5.184e-03 0.170 -2.083 GPT2 glutamic pyruvate transaminase (alanine aminotransferase) 2 16 45475808, 45476602 BG328998 16q12.1 Hs.460693 9

L-alanine:2-oxoglutarate aminotransferase activity

transaminase activity

biosynthetic process

pyridoxal phosphate binding

Alanine, aspartate and glutamate metabolism

Carbon fixation in photosynthetic organisms

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Metabolic pathways

226310_at -0.693 5.876 -3.260 5.189e-03 0.170 -2.084 RICTOR RPTOR independent companion of MTOR, complex 2 5 -38973779 AI743511 5p13.1 Hs.407926 21

guanyl-nucleotide exchange factor activity

protein binding

intracellular

embryonic development

positive regulation of actin filament polymerization

actin cytoskeleton reorganization

TORC2 complex

positive regulation of TOR signaling pathway

regulation of Rac GTPase activity

regulation of actin cytoskeleton organization

positive regulation of peptidyl-tyrosine phosphorylation

regulation of small GTPase mediated signal transduction

regulation of protein kinase B signaling cascade

mTOR signaling pathway

217784_at -0.443 6.689 -3.260 5.198e-03 0.170 -2.085 YKT6 YKT6 v-SNARE homolog (S. cerevisiae) 7 44207102 BE384482 7p15.1 Hs.520794 19

SNAP receptor activity

cytoplasm

endosome

endoplasmic reticulum

Golgi apparatus

cytosol

integral to plasma membrane

ER to Golgi vesicle-mediated transport

vesicle targeting

vesicle docking during exocytosis

protein transport

membrane

transferase activity

protein-cysteine S-palmitoleyltransferase activity

SNARE complex

SNARE complex

cytoplasmic vesicle

retrograde transport, endosome to Golgi

SNARE interactions in vesicular transport

205011_at 0.461 6.303 3.258 5.216e-03 0.170 -2.089 VWA5A von Willebrand factor A domain containing 5A 11 123491320, 123491320 NM_014622 11q23 Hs.152944 5    
210538_s_at 0.576 3.460 3.257 5.226e-03 0.170 -2.090 BIRC3 baculoviral IAP repeat-containing 3 11 101693403 U37546 11q22 Hs.127799 92

ubiquitin-protein ligase activity

protein binding

intracellular

nucleus

cytoplasm

anti-apoptosis

cell surface receptor linked signal transduction

zinc ion binding

regulation of apoptosis

metal ion binding

Ubiquitin mediated proteolysis

Apoptosis

Focal adhesion

Pathways in cancer

Small cell lung cancer

211212_s_at -0.712 4.231 -3.256 5.240e-03 0.171 -2.093 ORC5L origin recognition complex, subunit 5-like (yeast) 7 -103595859, -103554023 AF081459 7q22.1 Hs.432948 28

nucleotide binding

DNA replication origin binding

ATP binding

nucleus

nucleoplasm

DNA replication

DNA replication

DNA replication initiation

identical protein binding

Cell cycle

201588_at -0.314 10.440 -3.255 5.242e-03 0.171 -2.093 TXNL1 thioredoxin-like 1 18 -52421050 NM_004786 18q21.31 Hs.114412 15

cytoplasm

transport

disulfide oxidoreductase activity

electron transport chain

cell redox homeostasis

 
226538_at -0.658 7.174 -3.255 5.244e-03 0.171 -2.094 MAN2A1 mannosidase, alpha, class 2A, member 1 5 109053054 AV700323 5q21-q22 Hs.432822 29

Golgi membrane

in utero embryonic development

liver development

alpha-mannosidase activity

mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity

Golgi apparatus

carbohydrate metabolic process

mannose metabolic process

N-glycan processing

mitochondrion organization

vacuole organization

respiratory gaseous exchange

metabolic process

zinc ion binding

membrane

integral to membrane

hydrolase activity, hydrolyzing N-glycosyl compounds

carbohydrate binding

metal ion binding

lung alveolus development

N-Glycan biosynthesis

Metabolic pathways

201904_s_at 0.838 6.793 3.255 5.250e-03 0.171 -2.094 CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like 3 37878672 BF031714 3p21.3 Hs.475963 18

molecular_function

phosphoprotein phosphatase activity

cellular_component

nucleus

biological_process

hydrolase activity

 
238697_at 0.452 3.047 3.254 5.258e-03 0.171 -2.096 NCRNA00086 non-protein coding RNA 86 X 134383533 AA565509 Xq26.3 Hs.374414 3    
219448_at -1.822 7.532 -3.253 5.273e-03 0.171 -2.099 TMEM70 transmembrane protein 70 8 75050983 BC002748 8q21.11 Hs.106650 7

molecular_function

mitochondrion

membrane

integral to membrane

integral to mitochondrial membrane

mitochondrial proton-transporting ATP synthase complex assembly

 
206408_at 0.394 3.452 3.252 5.277e-03 0.171 -2.099 LRRTM2 leucine rich repeat transmembrane neuronal 2 5 -138232977 NM_015564 5q31.2 Hs.656653 6

protein binding

membrane

integral to membrane

 
218630_at 0.285 5.884 3.252 5.284e-03 0.171 -2.100 MKS1 Meckel syndrome, type 1 17 -53637796 NM_017777 17q22 Hs.408843 13    
221215_s_at 0.357 5.756 3.251 5.292e-03 0.172 -2.102 RIPK4 receptor-interacting serine-threonine kinase 4 21 -42032597 NM_020639 21q22.3 Hs.517310 13

nucleotide binding

protein serine/threonine kinase activity

receptor activity

ATP binding

cytoplasm

protein amino acid phosphorylation

membrane

transferase activity

 
202641_at 0.457 6.960 3.250 5.298e-03 0.172 -2.103 ARL3 ADP-ribosylation factor-like 3 10 -104423477 NM_004311 10q23.3 Hs.182215 18

nucleotide binding

magnesium ion binding

GTP binding

intracellular

nucleus

Golgi apparatus

spindle

cell cycle

small GTPase mediated signal transduction

membrane

cell division

 
203773_x_at 0.409 8.645 3.250 5.305e-03 0.172 -2.104 BLVRA biliverdin reductase A 7 43764796 NM_000712 7p14-cen Hs.488143 17

biliverdin reductase activity

binding

cytoplasm

zinc ion binding

oxidoreductase activity

heme catabolic process

metal ion binding

oxidation reduction

Porphyrin and chlorophyll metabolism

201366_at -0.554 9.200 -3.249 5.307e-03 0.172 -2.104 ANXA7 annexin A7 10 -74805194 NM_004034 10q21.1-q21.2 Hs.631827 24

calcium ion binding

calcium-dependent phospholipid binding

calcium-dependent protein binding

 
213589_s_at 0.497 5.805 3.249 5.309e-03 0.172 -2.105 B3GNTL1 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 17 -78494955 AW468201 17q25.3 Hs.718480 5

transferase activity, transferring glycosyl groups

 
202012_s_at -0.505 6.047 -3.249 5.316e-03 0.172 -2.106 EXT2 exostoses (multiple) 2 11 44073674 AA196245 11p12-p11 Hs.368404 55

ossification

mesoderm formation

protein binding

endoplasmic reticulum

Golgi apparatus

glycosaminoglycan biosynthetic process

signal transduction

heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process

membrane

integral to membrane

cell differentiation

intrinsic to endoplasmic reticulum membrane

heparan sulfate N-acetylglucosaminyltransferase activity

protein homodimerization activity

protein heterodimerization activity

glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity

N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity

Heparan sulfate biosynthesis

Metabolic pathways

222422_s_at -0.467 7.071 -3.249 5.317e-03 0.172 -2.106 NDFIP1 Nedd4 family interacting protein 1 5 141468507 AW167859 5q31.3 Hs.653510 Hs.9788 11

signal transducer activity

protein binding

Golgi apparatus

cellular iron ion homeostasis

negative regulation of gene expression

membrane

integral to membrane

positive regulation of protein ubiquitination

negative regulation of transporter activity

positive regulation of I-kappaB kinase/NF-kappaB cascade

perinuclear region of cytoplasm

negative regulation of protein transport

 
217850_at -0.636 7.880 -3.248 5.320e-03 0.172 -2.107 GNL3 guanine nucleotide binding protein-like 3 (nucleolar) 3 52694975 NM_014366 3p21.1 Hs.313544 29

nucleotide binding

protein binding

GTP binding

intracellular

nucleus

nucleoplasm

nucleolus

regulation of cell proliferation

 
225288_at 0.702 5.649 3.248 5.325e-03 0.172 -2.107 COL27A1 collagen, type XXVII, alpha 1 9 115958051 AI949136 9q32 Hs.494892 8

extracellular matrix structural constituent

extracellular region

collagen

cell adhesion

 
204042_at -0.706 6.999 -3.247 5.330e-03 0.172 -2.108 WASF3 WAS protein family, member 3 13 26029839 AB020707 13q12 Hs.635221 19

actin binding

cytoplasm

cytoskeleton

protein complex assembly

actin filament polymerization

Adherens junction

Fc gamma R-mediated phagocytosis

211686_s_at -0.528 6.971 -3.247 5.332e-03 0.172 -2.109 MAK16 MAK16 homolog (S. cerevisiae) 8 33462226 AF251062 8p12 Hs.583805 10

nucleus

nucleolus

 
201393_s_at -0.674 8.969 -3.247 5.340e-03 0.172 -2.110 IGF2R insulin-like growth factor 2 receptor 6 160310120 NM_000876 6q26 Hs.487062 101

glycoprotein binding

receptor activity

insulin-like growth factor receptor activity

transporter activity

insulin-like growth factor binding

mannose binding

membrane fraction

nucleus

nuclear envelope lumen

cytoplasm

lysosome

endosome

Golgi apparatus

integral to plasma membrane

transport

receptor-mediated endocytosis

signal transduction

membrane

trans-Golgi network transport vesicle

Lysosome

215992_s_at -0.421 4.153 -3.246 5.347e-03 0.172 -2.111 RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 4 160408447 AL117397 4q32.1 Hs.113912 14

MAPKKK cascade

signal transducer activity

guanyl-nucleotide exchange factor activity

calcium ion binding

protein binding

intracellular

plasma membrane

integral to plasma membrane

Rap guanyl-nucleotide exchange factor activity

cAMP-mediated signaling

diacylglycerol binding

Rap GTPase activator activity

regulation of small GTPase mediated signal transduction

MAPK signaling pathway

223200_s_at -0.748 6.350 -3.245 5.353e-03 0.172 -2.112 LSG1 large subunit GTPase 1 homolog (S. cerevisiae) 3 -195842806 AI219740 3q29 Hs.518505 12

nucleotide binding

GTP binding

intracellular

nucleus

cytoplasm

endoplasmic reticulum

Cajal body

protein transport

hydrolase activity

nuclear export

 
203266_s_at -0.495 6.793 -3.244 5.364e-03 0.172 -2.114 MAP2K4 mitogen-activated protein kinase kinase 4 17 11864859 NM_003010 17p11.2 Hs.514681 92

nucleotide binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

signal transduction

JNK cascade

transferase activity

MAPK signaling pathway

ErbB signaling pathway

Toll-like receptor signaling pathway

Fc epsilon RI signaling pathway

GnRH signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

228113_at 0.334 3.387 3.243 5.381e-03 0.172 -2.117 RAB37 RAB37, member RAS oncogene family 17 70178850, 70244553, 70244950 R62453 17q25.1 Hs.592097 11

nucleotide binding

GTP binding

ER-Golgi intermediate compartment

small GTPase mediated signal transduction

protein transport

cytoplasmic vesicle

 
202716_at -0.394 6.465 -3.242 5.387e-03 0.172 -2.118 PTPN1 protein tyrosine phosphatase, non-receptor type 1 20 48560297 NM_002827 20q13.1-q13.2 Hs.417549 144

protein tyrosine phosphatase activity

protein binding

endoplasmic reticulum

protein amino acid dephosphorylation

signal transduction

zinc ion binding

membrane

hydrolase activity

negative regulation of insulin receptor signaling pathway

Adherens junction

Insulin signaling pathway

201599_at -0.924 9.166 -3.242 5.390e-03 0.172 -2.119 OAT ornithine aminotransferase (gyrate atrophy) 10 -126075861 NM_000274 10q26 Hs.523332 28

ornithine-oxo-acid transaminase activity

protein binding

cytoplasm

mitochondrion

mitochondrial matrix

visual perception

transferase activity

pyridoxal phosphate binding

Arginine and proline metabolism

Metabolic pathways

226453_at -0.467 7.199 -3.242 5.390e-03 0.172 -2.119 RNASEH2C ribonuclease H2, subunit C 11 -65241719 BF982002 11q13.1 Hs.718438 9

nucleus

DNA replication

221150_at 0.366 4.975 3.241 5.405e-03 0.173 -2.121 MEPE matrix extracellular phosphoglycoprotein 4 88973163 NM_020203 4q21.1 Hs.676357 13

skeletal system development

extracellular matrix structural constituent

protein binding

extracellular region

proteinaceous extracellular matrix

negative regulation of bone mineralization

 
206614_at 0.344 5.363 3.240 5.410e-03 0.173 -2.122 GDF5 growth differentiation factor 5 20 -33484562 NM_000557 20q11.2 Hs.1573 58

cytokine activity

protein binding

extracellular region

extracellular space

transforming growth factor beta receptor signaling pathway

cell-cell signaling

growth factor activity

embryonic limb morphogenesis

positive regulation of chondrocyte differentiation

post-embryonic hindlimb morphogenesis

forelimb morphogenesis

growth

regulation of multicellular organism growth

regulation of apoptosis

Cytokine-cytokine receptor interaction

TGF-beta signaling pathway

200764_s_at -0.417 6.736 -3.240 5.413e-03 0.173 -2.123 CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 5 138117005 AI826881 5q31 Hs.534797 Hs.656653 70

structural molecule activity

protein binding

cytoplasm

plasma membrane

adherens junction

cell adhesion

actin cytoskeleton

vinculin binding

cell junction

apical junction assembly

cadherin binding

Adherens junction

Tight junction

Leukocyte transendothelial migration

Pathways in cancer

Endometrial cancer

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

213435_at -0.532 5.922 -3.240 5.416e-03 0.173 -2.123 SATB2 SATB homeobox 2 2 -199842468 AB028957 2q33 Hs.516617 9

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

sequence-specific DNA binding

 
202845_s_at -0.454 7.788 -3.239 5.418e-03 0.173 -2.123 RALBP1 ralA binding protein 1 18 9465529 NM_006788 18p11.3 Hs.528993 Hs.719181 42

GTPase activator activity

protein binding

intracellular

transport

chemotaxis

signal transduction

small GTPase mediated signal transduction

membrane

ATPase activity

Ral GTPase binding

Rac GTPase activator activity

regulation of GTPase activity

positive regulation of Cdc42 GTPase activity

ATPase activity, coupled to movement of substances

Rac GTPase binding

Pathways in cancer

Pancreatic cancer

1553267_a_at 0.296 2.281 3.239 5.421e-03 0.173 -2.124 CNOT6L CCR4-NOT transcription complex, subunit 6-like 4 -78853564 NM_144571 4q13.3 Hs.592519 5

exonuclease activity

protein binding

cytoplasm

mRNA processing

hydrolase activity

RNA degradation

233814_at 0.409 4.042 3.239 5.424e-03 0.173 -2.124 EFNA5 ephrin-A5 5 -106740488 AK025909 5q21 Hs.288741 27

protein binding

extracellular space

plasma membrane

cell-cell signaling

multicellular organismal development

nervous system development

cell differentiation

anchored to plasma membrane

ephrin receptor binding

Axon guidance

220606_s_at -0.740 6.229 -3.238 5.435e-03 0.173 -2.126 C17orf48 chromosome 17 open reading frame 48 17 10541651 NM_020233 17p13.1 Hs.47668 Hs.708369 2

zinc ion binding

hydrolase activity

metal ion binding

ADP-ribose diphosphatase activity

CDP-glycerol diphosphatase activity

 
218750_at -0.609 5.525 -3.237 5.440e-03 0.173 -2.127 TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 11 -93108745 NM_024116 11q21 Hs.355750 6

DNA binding

protein binding

nucleus

regulation of transcription

 
203396_at -0.355 9.065 -3.237 5.449e-03 0.173 -2.129 PSMA4 proteasome (prosome, macropain) subunit, alpha type, 4 15 76619801 NM_002789 15q25.1 Hs.251531 47

threonine-type endopeptidase activity

nucleus

cytoplasm

cytosol

proteasome core complex

ubiquitin-dependent protein catabolic process

peptidase activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

identical protein binding

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

proteolysis involved in cellular protein catabolic process

Proteasome

200847_s_at -0.669 9.716 -3.236 5.455e-03 0.173 -2.129 TMEM66 transmembrane protein 66 8 -30040172 NM_016127 8p12 Hs.521487 10

membrane

integral to membrane

 
206973_at 0.432 4.454 3.236 5.460e-03 0.173 -2.130 PPFIA2 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 12 -80177486 NM_003625 12q21.31 Hs.506216 7

protein binding

cytoplasm

cell-matrix adhesion

cell surface

 
218934_s_at -0.696 10.768 -3.236 5.461e-03 0.173 -2.130 HSPB7 heat shock 27kDa protein family, member 7 (cardiovascular) 1 -16213109 NM_014424 1p36.23-p34.3 Hs.502612 7

response to unfolded protein

regulation of heart contraction

protein C-terminus binding

response to heat

 
241938_at 0.882 7.147 3.235 5.465e-03 0.173 -2.131 QKI quaking homolog, KH domain RNA binding (mouse) 6 163755664, 163755664 AA935633 6q26 6q26-q27 Hs.510324 Hs.593520 23

RNA binding

protein binding

nucleus

nucleolus

cytoplasm

plasma membrane

mRNA processing

regulation of translation

transport

multicellular organismal development

RNA splicing

SH3 domain binding

cell differentiation

mRNA transport

 
201423_s_at -0.563 8.987 -3.235 5.472e-03 0.173 -2.132 CUL4A cullin 4A 13 112911086, 112911931 AL037208 13q34 Hs.339735 48

G1/S transition of mitotic cell cycle

protein binding

DNA repair

ubiquitin-dependent protein catabolic process

response to DNA damage stimulus

cell cycle arrest

negative regulation of cell proliferation

induction of apoptosis by intracellular signals

cullin-RING ubiquitin ligase complex

ubiquitin protein ligase binding

Nucleotide excision repair

Ubiquitin mediated proteolysis

230563_at 0.833 4.497 3.234 5.474e-03 0.173 -2.133 RASGEF1A RasGEF domain family, member 1A 10 -43009989 BF446578 10q11.21 Hs.125293 4

guanyl-nucleotide exchange factor activity

intracellular

regulation of small GTPase mediated signal transduction

 
203016_s_at -0.741 5.926 -3.234 5.482e-03 0.173 -2.134 SSX2IP synovial sarcoma, X breakpoint 2 interacting protein 1 -84882184 AK001710 1p22.3 Hs.22587 14

protein binding

nucleus

adherens junction

cell adhesion

cell junction

protein complex

Adherens junction

216082_at 0.405 4.629 3.233 5.495e-03 0.174 -2.136 NEU3 sialidase 3 (membrane sialidase) 11 74377597 AK022450 11q13.5 Hs.191074 25

exo-alpha-sialidase activity

plasma membrane

integral to plasma membrane

carbohydrate metabolic process

ganglioside catabolic process

metabolic process

hydrolase activity, acting on glycosyl bonds

Other glycan degradation

Sphingolipid metabolism

226541_at -0.534 6.966 -3.232 5.503e-03 0.174 -2.138 FBXO30 F-box protein 30 6 -146160964 AI808182 6q24 Hs.421095 8

zinc ion binding

modification-dependent protein catabolic process

metal ion binding

 
1569323_at -0.812 4.935 -3.232 5.507e-03 0.174 -2.138 PTPRG protein tyrosine phosphatase, receptor type, G 3 61522282 BU853579 3p21-p14 Hs.595541 Hs.654488 19

transmembrane receptor protein tyrosine phosphatase activity

integral to plasma membrane

protein amino acid dephosphorylation

transmembrane receptor protein tyrosine kinase signaling pathway

membrane

hydrolase activity

identical protein binding

 
238844_s_at -0.760 5.808 -3.231 5.515e-03 0.174 -2.139 NPHP1 nephronophthisis 1 (juvenile) 2 -110238202 BF216535 2q13 Hs.280388 36

structural molecule activity

protein binding

adherens junction

signal transduction

excretion

visual behavior

membrane

cell-cell adhesion

actin cytoskeleton organization

cell junction

 
206461_x_at -0.773 10.334 -3.229 5.532e-03 0.174 -2.142 MT1H metallothionein 1H 16 55261226 NM_005951 16q13 Hs.438462 16

copper ion binding

protein binding

zinc ion binding

cadmium ion binding

metal ion binding

 
1569076_a_at 0.444 3.324 3.229 5.537e-03 0.174 -2.143 ZNF836 zinc finger protein 836 19 -57349936 BE791720 19q13.41 Hs.631584 1

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1559926_at 0.678 5.115 3.228 5.544e-03 0.174 -2.144 LOC728353 hypothetical protein LOC728353 14   BC031683 14q11.2 Hs.621210      
221600_s_at 0.746 8.954 3.227 5.563e-03 0.175 -2.147 C11orf67 chromosome 11 open reading frame 67 11 77209855 BC002752 11q14.1 Hs.503357 3    
209033_s_at -0.614 9.042 -3.225 5.586e-03 0.175 -2.151 DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 21 37661728, 37713076, 37714470, 37714471 D86550 21q22.13 Hs.368240 Hs.719269 57

nucleotide binding

protein serine/threonine kinase activity

non-membrane spanning protein tyrosine kinase activity

ATP binding

nucleus

nervous system development

nuclear speck

transferase activity

peptidyl-tyrosine phosphorylation

protein self-association

protein amino acid autophosphorylation

 
213224_s_at -0.437 6.000 -3.224 5.593e-03 0.176 -2.152 NCRNA00081 non-protein coding RNA 81 10 -112648478, -112648478 AK025724 10q25.2 Hs.232543 Hs.651480 4

cytoplasm

cilium

 
201136_at -0.813 7.879 -3.224 5.599e-03 0.176 -2.153 PLP2 proteolipid protein 2 (colonic epithelium-enriched) X 48915216 NM_002668 Xp11.23 Hs.77422 12

protein binding

membrane fraction

endoplasmic reticulum

endoplasmic reticulum membrane

plasma membrane

ion transport

chemotaxis

ion transmembrane transporter activity

integral to membrane

cytokine-mediated signaling pathway

chemokine binding

 
236824_at -0.315 2.615 -3.223 5.603e-03 0.176 -2.154 TMEM132B transmembrane protein 132B 12 124377114 AI435595 12q24.31-q24.32 Hs.524838 4

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
225914_s_at -0.500 4.879 -3.223 5.606e-03 0.176 -2.154 CAB39L calcium binding protein 39-like 13 -48780786, -48780786 AW242839 13q14.2 Hs.87159 9

protein binding

mTOR signaling pathway

222279_at 0.420 4.999 3.222 5.612e-03 0.176 -2.155 RP3-377H14.5 hypothetical LOC285830 6 -29802356, -1147069, -949185 AI669379 6p22.1 Hs.646985 2    
211684_s_at -0.423 8.353 -3.222 5.614e-03 0.176 -2.156 DYNC1I2 dynein, cytoplasmic 1, intermediate chain 2 2 172252227 AF250307 2q31.1 Hs.546250 17

microtubule motor activity

protein binding

cytoplasm

microtubule

microtubule-based movement

dynein complex

 
225731_at -0.492 5.190 -3.220 5.639e-03 0.176 -2.160 ANKRD50 ankyrin repeat domain 50 4 -125804915 BF196876 4q28.1 Hs.480694 3    
209276_s_at -0.916 9.119 -3.219 5.654e-03 0.176 -2.162 GLRX glutaredoxin (thioltransferase) 5 -95175308 AF162769 5q14 Hs.28988 Hs.712696 47

cytoplasm

cytosol

transport

electron carrier activity

protein disulfide oxidoreductase activity

glutathione disulfide oxidoreductase activity

electron transport chain

cell redox homeostasis

protein N-terminus binding

 
226103_at -0.444 11.454 -3.218 5.657e-03 0.176 -2.163 NEXN nexilin (F actin binding protein) 1 78126787 AF114264 1p31.1 Hs.612385 6

cytoplasm

cytoskeleton

cell-substrate adherens junction

cell junction

regulation of cell migration

actin filament binding

regulation of cytoskeleton organization

 
208799_at -0.334 10.104 -3.218 5.660e-03 0.176 -2.163 PSMB5 proteasome (prosome, macropain) subunit, beta type, 5 14 -22564900, -22564900 BC004146 14q11.2 Hs.422990 53

threonine-type endopeptidase activity

protein binding

nucleus

cytoplasm

cytosol

proteasome core complex

peptidase activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

proteolysis involved in cellular protein catabolic process

Proteasome

204336_s_at 0.480 5.732 3.218 5.667e-03 0.177 -2.164 RGS19 regulator of G-protein signaling 19 20 -62174978, -62174978 NM_005873 20q13.33 Hs.422336 25

signal transducer activity

protein binding

membrane fraction

Golgi apparatus

heterotrimeric G-protein complex

autophagy

G-protein coupled receptor protein signaling pathway

small GTPase mediated signal transduction

negative regulation of signal transduction

membrane

 
228920_at 0.459 5.963 3.217 5.674e-03 0.177 -2.165 ZNF260 zinc finger protein 260 19 -41693433 BE328273 19q13.12 Hs.18103 5

DNA binding

intracellular

nucleus

multicellular organismal development

zinc ion binding

regulation of transcription

metal ion binding

 
209840_s_at -1.123 5.365 -3.217 5.677e-03 0.177 -2.166 LRRN3 leucine rich repeat neuronal 3 7 110518297 AI221950 7q31.1 Hs.3781 6

protein binding

membrane

integral to membrane

 
219632_s_at 0.613 5.676 3.216 5.684e-03 0.177 -2.167 TRPV1 transient receptor potential cation channel, subfamily V, member 1 17 -3415489, -3415489, -3415489, -3415489 AF196175 17p13.2 Hs.579217 Hs.655380 107

nucleotide binding

ion channel activity

calcium channel activity

calcium ion binding

calmodulin binding

ATP binding

plasma membrane

integral to plasma membrane

ion transport

calcium ion transport

cell surface receptor linked signal transduction

chemosensory behavior

thermoception

Neuroactive ligand-receptor interaction

208814_at -0.662 7.388 -3.215 5.700e-03 0.177 -2.170 HSPA4 heat shock 70kDa protein 4 5 132415560 AA043348 5q31.1-q31.2 Hs.90093 108

nucleotide binding

ATP binding

nucleus

cytoplasm

response to unfolded protein

cellular chaperone-mediated protein complex assembly

mitochondrial outer membrane translocase complex assembly

Antigen processing and presentation

223084_s_at -0.710 8.721 -3.214 5.704e-03 0.177 -2.170 CCNDBP1 cyclin D-type binding-protein 1 15 41264757, 41265429 AF246144 15q14-q15 Hs.36794 Hs.368642 Hs.688009 19

protein binding

nucleus

cytoplasm

cell cycle

 
214553_s_at -0.668 9.327 -3.214 5.707e-03 0.177 -2.171 ARPP19 cAMP-regulated phosphoprotein, 19kDa 15 -50626723 NM_006628 15q21.2 Hs.512908 10

receptor binding

cytoplasm

potassium channel regulator activity

positive regulation of gluconeogenesis

positive regulation of glucose import

 
204979_s_at -0.431 11.743 -3.213 5.720e-03 0.177 -2.173 SH3BGR SH3 domain binding glutamic acid-rich protein 21 39739666, 39745649 NM_007341 21q22.3 Hs.473847 8

SH3/SH2 adaptor activity

cytosol

protein complex assembly

SH3 domain binding

 
209804_at -0.790 5.084 -3.213 5.725e-03 0.177 -2.174 DCLRE1A DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) 10 -115584473 D42045 10q25.1 Hs.1560 14

nucleus

nucleotide-excision repair

response to DNA damage stimulus

cell cycle

mitosis

cell division

 
227054_at 0.361 7.055 3.213 5.727e-03 0.177 -2.174 N6AMT2 N-6 adenine-specific DNA methyltransferase 2 (putative) 13 -20201072 AI141584 13q12.11 Hs.26674 3

nucleic acid binding

methyltransferase activity

transferase activity

methylation

 
1557720_s_at 1.202 4.018 3.212 5.735e-03 0.177 -2.175 MYO16 myosin XVI 13 108046500 BC041343 13q33.3 Hs.656587 7

nucleotide binding

motor activity

ATP binding

nucleoplasm

cytoplasm

plasma membrane

negative regulation of cell proliferation

myosin complex

cerebellum development

negative regulation of S phase of mitotic cell cycle

perinuclear region of cytoplasm

actin filament binding

 
209147_s_at -0.535 9.090 -3.212 5.736e-03 0.177 -2.175 PPAP2A phosphatidic acid phosphatase type 2A 5 -54756439 AB000888 5q11 Hs.696231 20

membrane fraction

cytosol

plasma membrane

integral to plasma membrane

activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway

phosphatidate phosphatase activity

phosphatidate phosphatase activity

phosphatidate phosphatase activity

negative regulation of cell proliferation

germ cell migration

hydrolase activity

regulation of lipid metabolic process

androgen receptor signaling pathway

phospholipid dephosphorylation

Glycerolipid metabolism

Glycerophospholipid metabolism

Ether lipid metabolism

Sphingolipid metabolism

Metabolic pathways

Fc gamma R-mediated phagocytosis

1556839_s_at 0.641 4.206 3.211 5.747e-03 0.178 -2.177 SPTBN5 spectrin, beta, non-erythrocytic 5 15 -39927635 AA515490 15q21 Hs.709819 3

actin binding

cytoplasm

cytoskeleton

spectrin

membrane

actin cytoskeleton organization

actin filament capping

 
205202_at -0.528 10.257 -3.209 5.768e-03 0.178 -2.180 PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 6 150112523 NM_005389 6q24-q25 Hs.279257 25

protein-L-isoaspartate (D-aspartate) O-methyltransferase activity

cellular_component

cytoplasm

endoplasmic reticulum

protein modification process

protein amino acid methylation

methyltransferase activity

transferase activity

protein repair

identical protein binding

 
210596_at -0.411 6.170 -3.209 5.774e-03 0.178 -2.181 MAGT1 magnesium transporter 1 X -76968519 AF130104 Xq21.1 Hs.323562 Hs.710189 14

dolichyl-diphosphooligosaccharide-protein glycotransferase activity

endoplasmic reticulum

oligosaccharyltransferase complex

membrane

integral to membrane

protein amino acid N-linked glycosylation via asparagine

 
213860_x_at -0.580 8.864 -3.207 5.791e-03 0.178 -2.184 CSNK1A1 casein kinase 1, alpha 1 5 -148855037 AW268585 5q32 Hs.529862 Hs.712555 53

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

cytosol

protein amino acid phosphorylation

Wnt receptor signaling pathway

transferase activity

Wnt signaling pathway

Hedgehog signaling pathway

209034_at -0.604 10.368 -3.207 5.794e-03 0.178 -2.185 PNRC1 proline-rich nuclear receptor coactivator 1 6 89847147 AF279899 6q15 Hs.703798 Hs.75969 11

protein binding

nucleus

regulation of transcription

 
220185_at 0.437 5.760 3.207 5.795e-03 0.178 -2.185 SPTBN4 spectrin, beta, non-erythrocytic 4 19 45664965, 45728234 NM_025213 19q13.13 Hs.32706 11

actin binding

structural constituent of cytoskeleton

protein binding

cytoplasm

cytoskeleton

cell cortex

cytoskeletal anchoring at plasma membrane

axonogenesis

sensory perception of sound

adult walking behavior

spectrin

fertilization

vesicle-mediated transport

nuclear matrix

PML body

transmission of nerve impulse

axon

ankyrin binding

adult behavior

positive regulation of multicellular organism growth

axon hillock

actin filament capping

 
1554579_a_at -0.744 8.489 -3.207 5.797e-03 0.178 -2.185 MYO18B myosin XVIIIB 22 24468119 AB042648 22q11.2-q12.1 Hs.417959 11

nucleotide binding

motor activity

actin binding

protein binding

ATP binding

nucleus

cytoplasm

unconventional myosin complex

sarcomere

 
217841_s_at -0.358 7.156 -3.206 5.800e-03 0.178 -2.185 PPME1 protein phosphatase methylesterase 1 11 73560015 NM_016147 11q13.4 Hs.503251 10

carboxylesterase activity

phosphoprotein phosphatase inhibitor activity

protein amino acid demethylation

protein phosphatase type 2A regulator activity

hydrolase activity

protein phosphatase 2A binding

protein C-terminal methylesterase activity

Tropane, piperidine and pyridine alkaloid biosynthesis

201316_at -0.647 8.090 -3.206 5.805e-03 0.178 -2.186 PSMA2 proteasome (prosome, macropain) subunit, alpha type, 2 7 -42922986 AL523904 7p13 Hs.333786 48

threonine-type endopeptidase activity

protein binding

nucleus

cytoplasm

cytosol

proteasome core complex

ubiquitin-dependent protein catabolic process

peptidase activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

proteolysis involved in cellular protein catabolic process

Proteasome

212999_x_at 0.615 4.201 3.206 5.806e-03 0.178 -2.186 HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 6 -32735634 AW276186 6p21.3 Hs.409934 Hs.534322 Hs.713773 998

antigen processing and presentation of peptide or polysaccharide antigen via MHC class II

plasma membrane

immune response

immune response

membrane

membrane

integral to membrane

MHC class II receptor activity

MHC class II protein complex

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

203781_at 0.350 11.411 3.205 5.813e-03 0.179 -2.188 MRPL33 mitochondrial ribosomal protein L33 2 27848087 NM_004891 2p21 Hs.515879 8

structural constituent of ribosome

intracellular

mitochondrion

ribosome

translation

 
244861_at 0.342 6.374 3.205 5.816e-03 0.179 -2.188 ZNF527 zinc finger protein 527 19 42553898 AI679883 19q13.1 Hs.590940 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
226222_at -0.477 5.512 -3.205 5.818e-03 0.179 -2.188 KIAA1432 KIAA1432 9 5619326, 5646582 AB037853 9p24.1 Hs.211520 5

membrane

integral to membrane

 
213012_at -1.098 7.748 -3.204 5.824e-03 0.179 -2.189 NEDD4 neural precursor cell expressed, developmentally down-regulated 4 15 -53906413, -53906413 D42055 15q Hs.1565 79

ubiquitin ligase complex

chromatin

ubiquitin-protein ligase activity

intracellular

membrane fraction

cytoplasm

cytosol

plasma membrane

cell cortex

protein modification process

protein targeting to lysosome

pathogenesis

negative regulation of sodium ion transport

negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage

positive regulation of phosphoinositide 3-kinase cascade

apicolateral plasma membrane

ligase activity

acid-amino acid ligase activity

transmission of virus

sodium channel inhibitor activity

protein domain specific binding

modification-dependent protein catabolic process

neuron projection development

receptor internalization

beta-2 adrenergic receptor binding

receptor catabolic process

cellular response to UV

protein ubiquitination during ubiquitin-dependent protein catabolic process

glucocorticoid receptor signaling pathway

ubiquitin binding

ubiquitin binding

positive regulation of protein catabolic process

positive regulation of nucleocytoplasmic transport

perinuclear region of cytoplasm

phosphoserine binding

phosphothreonine binding

progesterone receptor signaling pathway

response to calcium ion

RNA polymerase binding

proline-rich region binding

Ubiquitin mediated proteolysis

Endocytosis

235953_at 0.691 4.455 3.204 5.827e-03 0.179 -2.190 ZNF610 zinc finger protein 610 19 57531309, 57540493 AA776810 19q13.41 Hs.357663 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
208853_s_at -0.595 6.394 -3.204 5.834e-03 0.179 -2.191 CANX calnexin 5 179058535 L18887 5q35 Hs.699155 90

calcium ion binding

sugar binding

endoplasmic reticulum

protein folding

protein secretion

membrane

integral to membrane

melanosome

unfolded protein binding

Antigen processing and presentation

213479_at -0.785 4.185 -3.203 5.837e-03 0.179 -2.191 NPTX2 neuronal pentraxin II 7 98084532 U26662 7q21.3-q22.1 Hs.3281 13

molecular_function

calcium ion binding

sugar binding

extracellular region

synaptic transmission

 
227702_at -0.896 5.832 -3.203 5.842e-03 0.179 -2.192 CYP4X1 cytochrome P450, family 4, subfamily X, polypeptide 1 1 47261826 AA557324 1p33 Hs.439760 7

monooxygenase activity

endoplasmic reticulum

microsome

electron carrier activity

membrane

heme binding

metal ion binding

oxidation reduction

aromatase activity

 
202824_s_at -0.343 10.120 -3.203 5.843e-03 0.179 -2.192 TCEB1 transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) 8 -75021187 NM_005648 8q21.11 Hs.554594 46

protein binding

nucleus

nucleoplasm

cytosol

regulation of transcription from RNA polymerase II promoter

ubiquitin-dependent protein catabolic process

interspecies interaction between organisms

regulation of transcription

Ubiquitin mediated proteolysis

Pathways in cancer

Renal cell carcinoma

212297_at -0.460 5.468 -3.203 5.844e-03 0.179 -2.192 ATP13A3 ATPase type 13A3 3 -195604691 BF218804 3q29 Hs.529609 11

nucleotide binding

magnesium ion binding

ATP binding

ATP biosynthetic process

cation transport

metabolic process

ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism

membrane

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

ATPase activity

 
1552344_s_at -0.899 6.052 -3.202 5.848e-03 0.179 -2.193 CNOT7 CCR4-NOT transcription complex, subunit 7 8 -17133392, -17131110 NM_054026 8p22-p21.3 Hs.645009 Hs.719129 19

nucleic acid binding

transcription factor activity

signal transducer activity

protein binding

nucleus

carbohydrate metabolic process

signal transduction

transcription activator activity

CCR4-NOT complex

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

RNA degradation

214074_s_at -0.482 5.140 -3.201 5.870e-03 0.179 -2.196 CTTN cortactin 11 69922259, 69922291 BG475299 11q13 Hs.596164 106

ruffle

protein binding

soluble fraction

cytoplasm

cytoskeleton

cell cortex

lamellipodium

Tight junction

Pathogenic Escherichia coli infection - EHEC

209984_at -0.357 5.759 -3.199 5.894e-03 0.180 -2.200 KDM4C lysine (K)-specific demethylase 4C 9 6710862, 6747640, 6747640, 6747640 AB037901 9p24.1 Hs.709425 15

molecular_function

nucleic acid binding

iron ion binding

protein binding

cellular_component

nucleus

biological_process

zinc ion binding

oxidoreductase activity

chromatin modification

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

regulation of transcription

metal ion binding

oxidation reduction

 
238929_at -0.452 5.174 -3.198 5.899e-03 0.180 -2.201 SFRS2B splicing factor, arginine/serine-rich 2B 11 94439703 N30132 11q22 Hs.476680 Hs.713908 6

nucleotide binding

RNA binding

nucleus

mRNA processing

RNA splicing

 
213571_s_at -0.573 7.408 -3.197 5.915e-03 0.180 -2.203 EIF4E2 eukaryotic translation initiation factor 4E family member 2 2 233123600 BF516289 2q37.1 Hs.292026 Hs.700929 15

RNA cap binding

translation initiation factor activity

protein binding

cytoplasm

translational initiation

regulation of translation

mTOR signaling pathway

Insulin signaling pathway

202201_at 0.675 8.887 3.196 5.929e-03 0.180 -2.206 BLVRB biliverdin reductase B (flavin reductase (NADPH)) 19 -45645530 NM_000713 19q13.1-q13.2 Hs.515785 14

biliverdin reductase activity

binding

cytoplasm

oxidoreductase activity

flavin reductase activity

cellular metabolic process

coenzyme binding

oxidation reduction

Porphyrin and chlorophyll metabolism

225138_at -0.684 7.678 -3.195 5.934e-03 0.180 -2.206 ZRANB1 zinc finger, RAN-binding domain containing 1 10 126620681 N52625 10q26.13 Hs.595158 3

ubiquitin-protein ligase activity

protein binding

intracellular

nucleus

cytoplasm

peptidase activity

cysteine-type peptidase activity

zinc ion binding

modification-dependent protein catabolic process

positive regulation of Wnt receptor signaling pathway

metal ion binding

 
213519_s_at -0.509 6.327 -3.193 5.959e-03 0.181 -2.210 LAMA2 laminin, alpha 2 6 129245978 AI078169 6q22-q23 Hs.200841 40

receptor binding

structural molecule activity

extracellular region

basal lamina

laminin-1 complex

muscle organ development

regulation of cell adhesion

regulation of cell migration

positive regulation of synaptic transmission, cholinergic

sarcolemma

regulation of embryonic development

Focal adhesion

ECM-receptor interaction

Pathways in cancer

Small cell lung cancer

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

204362_at 0.978 6.645 3.192 5.968e-03 0.181 -2.212 SKAP2 src kinase associated phosphoprotein 2 7 -26673212 NM_003930 7p21-p15 Hs.200770 Hs.644804 19

SH3/SH2 adaptor activity

cytoplasm

plasma membrane

protein complex assembly

signal transduction

negative regulation of cell proliferation

B cell activation

 
200792_at -0.575 9.536 -3.192 5.978e-03 0.181 -2.213 XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 22 40347240 NM_001469 22q13.2-q13.31 Hs.292493 155

nucleotide binding

telomere maintenance

nuclear telomere cap complex

DNA binding

double-stranded telomeric DNA binding

ATP-dependent DNA helicase activity

helicase activity

ATP binding

membrane fraction

nucleus

nucleoplasm

transcription factor complex

chromosome

cytoplasm

DNA-dependent protein kinase-DNA ligase 4 complex

DNA ligation

double-strand break repair via nonhomologous end joining

response to DNA damage stimulus

protein C-terminus binding

response to ionizing radiation

positive regulation of specific transcription from RNA polymerase II promoter

promoter binding

transcription activator activity

hydrolase activity

provirus integration

initiation of viral infection

V(D)J recombination

positive regulation of transcription, DNA-dependent

positive regulation of neurogenesis

Non-homologous end-joining

209046_s_at -0.430 10.852 -3.192 5.979e-03 0.181 -2.213 GABARAPL2 GABA(A) receptor-associated protein-like 2 16 74157749 AB030710 16q22.3-q24.1 Hs.461379 20

Golgi membrane

SNARE binding

autophagic vacuole membrane

intracellular

membrane fraction

Golgi apparatus

cytosol

intra-Golgi vesicle-mediated transport

autophagy

microtubule binding

protein transport

positive regulation of ATPase activity

beta-tubulin binding

GABA receptor binding

GABA receptor binding

ATPase binding

Regulation of autophagy

228239_at -0.574 5.726 -3.191 5.985e-03 0.181 -2.214 FAM165B family with sequence similarity 165, member B 21 34669618 AA148789 21q22.12 Hs.656195 7

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
232705_at -0.394 5.265 -3.191 5.989e-03 0.181 -2.215 LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 3 -37069120 AK025207 3p22.2 Hs.719246 7

protein binding

cellular_component

biological_process

Wnt receptor signaling pathway

LRR domain binding

 
230030_at -2.007 4.863 -3.191 5.991e-03 0.181 -2.215 HS6ST2 heparan sulfate 6-O-sulfotransferase 2 X -131587718 AI767756 Xq26.2 Hs.385956 7

sulfotransferase activity

membrane

integral to membrane

transferase activity

Heparan sulfate biosynthesis

222231_s_at -0.509 6.555 -3.190 5.995e-03 0.181 -2.216 LRRC59 leucine rich repeat containing 59 17 -45813597 AK025328 17q21.33 Hs.370927 6

protein binding

endoplasmic reticulum

microsome

membrane

integral to membrane

mitochondrial nucleoid

 
212355_at -0.595 5.427 -3.190 5.998e-03 0.181 -2.216 KIAA0323 KIAA0323 14 23968980 AI075450 14q12 Hs.713590 5    
1555271_a_at 0.388 5.059 3.189 6.010e-03 0.181 -2.218 TERT telomerase reverse transcriptase 5 -1306286 AB085628 5p15.33 Hs.492203 518

telomere maintenance

chromosome, telomeric region

nuclear telomere cap complex

DNA binding

telomeric template RNA reverse transcriptase activity

protein binding

nucleus

nucleoplasm

chromosome

telomerase holoenzyme complex

anti-apoptosis

telomere maintenance via telomerase

senescence

transferase activity

nucleotidyltransferase activity

DNA strand elongation

telomere formation via telomerase

telomeric DNA binding

protein homodimerization activity

telomeric RNA binding

 
227930_at -0.623 7.574 -3.187 6.037e-03 0.182 -2.222 EIF2C4 eukaryotic translation initiation factor 2C, 4 1 36046414 AI669957 1p34.3 Hs.471492 8

cytoplasmic mRNA processing body

RNA binding

protein binding

cytoplasm

mRNA catabolic process

regulation of translation

gene silencing by RNA

gene silencing by miRNA, negative regulation of translation

 
226364_at 0.461 5.856 3.186 6.043e-03 0.182 -2.223 HIP1 huntingtin interacting protein 1 7 -75001344 AU145049 7q11.23 Hs.329266 Hs.619089 31

actin binding

structural constituent of cytoskeleton

membrane fraction

nucleus

cytoplasm

Golgi apparatus

cytoskeleton

endocytosis

induction of apoptosis

activation of caspase activity

cell death

membrane

cell differentiation

clathrin binding

clathrin coated vesicle membrane

cytoplasmic vesicle

phosphoinositide binding

regulation of apoptosis

regulation of transcription

positive regulation of receptor-mediated endocytosis

clathrin coat assembly

Huntington's disease

225244_at -0.412 7.264 -3.186 6.046e-03 0.182 -2.223 SNAP47 synaptosomal-associated protein, 47kDa 1 225989319 AA019893 1q42.13 Hs.325081 3

cytoplasm

membrane

perinuclear region of cytoplasm

SNARE interactions in vesicular transport

227388_at -0.661 7.954 -3.185 6.056e-03 0.182 -2.225 TUSC1 tumor suppressor candidate 1 9 -25666386 AA479016 9p21.2 Hs.26268 Hs.606014 2    
1555154_a_at -0.786 6.750 -3.185 6.058e-03 0.182 -2.225 QKI quaking homolog, KH domain RNA binding (mouse) 6 163755664, 163755664 AF142421 6q26 6q26-q27 Hs.510324 Hs.593520 23

RNA binding

protein binding

nucleus

nucleolus

cytoplasm

plasma membrane

mRNA processing

regulation of translation

transport

multicellular organismal development

RNA splicing

SH3 domain binding

cell differentiation

mRNA transport

 
1557910_at -0.721 8.999 -3.184 6.072e-03 0.182 -2.227 HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 6 44322826 BG612458 6p12 Hs.509736 Hs.689683 Hs.701787 50

nucleotide binding

ATP binding

cytoplasm

protein folding

response to unfolded protein

nitric-oxide synthase regulator activity

TPR domain binding

negative regulation of proteasomal ubiquitin-dependent protein catabolic process

melanosome

positive regulation of nitric oxide biosynthetic process

unfolded protein binding

regulation of interferon-gamma-mediated signaling pathway

regulation of type I interferon-mediated signaling pathway

Antigen processing and presentation

Pathways in cancer

Prostate cancer

226734_at -0.711 6.631 -3.184 6.074e-03 0.182 -2.228 EIF4E2 eukaryotic translation initiation factor 4E family member 2 2 233123600 AW242220 2q37.1 Hs.292026 Hs.700929 15

RNA cap binding

translation initiation factor activity

protein binding

cytoplasm

translational initiation

regulation of translation

mTOR signaling pathway

Insulin signaling pathway

211536_x_at -0.364 5.661 -3.184 6.076e-03 0.182 -2.228 MAP3K7 mitogen-activated protein kinase kinase kinase 7 6 -91282073, -91282073 AB009358 6q16.1-q16.3 Hs.719192 114

nucleotide binding

magnesium ion binding

positive regulation of T cell cytokine production

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

cytosol

protein amino acid phosphorylation

signal transduction

transforming growth factor beta receptor signaling pathway

activation of NF-kappaB-inducing kinase activity

transferase activity

positive regulation of interleukin-2 production

T cell receptor signaling pathway

positive regulation of T cell activation

MAPK signaling pathway

Wnt signaling pathway

Adherens junction

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

T cell receptor signaling pathway

209621_s_at -0.788 12.315 -3.183 6.089e-03 0.182 -2.230 PDLIM3 PDZ and LIM domain 3 4 -186659844 AF002280 4q35 Hs.85862 12

nucleus

nucleolus

cytoplasm

actin filament organization

heart development

cytoskeletal protein binding

zinc ion binding

structural constituent of muscle

actin cytoskeleton

Z disc

metal ion binding

 
218876_at -1.408 6.526 -3.182 6.094e-03 0.182 -2.231 TPPP3 tubulin polymerization-promoting protein family member 3 16 -65981212 NM_016140 16q22.1 Hs.534458 8    
219816_s_at -0.358 7.003 -3.181 6.115e-03 0.183 -2.234 RBM23 RNA binding motif protein 23 14 -22439693 NM_018107 14q11.2 Hs.4997 11

nucleotide binding

RNA binding

nucleus

nucleolus

mRNA processing

 
228986_at -0.862 3.773 -3.181 6.116e-03 0.183 -2.234 OSBPL8 oxysterol binding protein-like 8 12 -75269708 AW978375 12q14 Hs.430849 13

lipid transport

steroid metabolic process

 
238497_at 0.342 3.491 3.180 6.118e-03 0.183 -2.234 TMEM136 transmembrane protein 136 11 119701225 N51836 11q23.3 Hs.706896 1

membrane

integral to membrane

 
222559_s_at -0.612 7.323 -3.180 6.123e-03 0.183 -2.235 RPRD1A regulation of nuclear pre-mRNA domain containing 1A 18 -31823789 T79568 18q12.2 Hs.464912 3    
213463_s_at -0.439 6.371 -3.180 6.124e-03 0.183 -2.235 FAM149B1 family with sequence similarity 149, member B1 10 74597882 AW300504 10q22.2 Hs.408577 4    
229296_at 0.383 4.045 3.180 6.124e-03 0.183 -2.235 LOC100128501 hypothetical protein LOC100128501 9   AI659477 9q34.11 Hs.711775 1    
211476_at -1.518 8.067 -3.180 6.129e-03 0.183 -2.236 MYOZ2 myozenin 2 4 120276386 AY013295 4q26-q27 Hs.381047 16

protein binding

cytoplasm

biological_process

actin cytoskeleton

sarcomere

Z disc

protein phosphatase 2B binding

 
1555083_at 0.311 6.198 3.180 6.130e-03 0.183 -2.236 RPL13AP17 ribosomal protein L13a pseudogene 17 7 77814494 BC027852 7q21.11 Hs.568045 3    
213737_x_at 0.378 8.885 3.179 6.138e-03 0.183 -2.237 GOLGA9P golgi autoantigen, golgin subfamily a, 9 pseudogene 15 20806682 AI620911 15q11.2 Hs.375441 2    
229940_at -0.522 5.675 -3.179 6.140e-03 0.183 -2.238 SETD3 SET domain containing 3 14 -98945893, -98933835 BF448048 14q32.2 Hs.510407 6    
227339_at -0.364 5.458 -3.178 6.145e-03 0.183 -2.238 RGMB RGM domain family, member B 5 98132898 BE206621 5q15 Hs.526902 5

ER-Golgi intermediate compartment

plasma membrane

cell adhesion

signal transduction

BMP signaling pathway

identical protein binding

positive regulation of transcription

anchored to plasma membrane

 
212261_at -0.276 7.311 -3.177 6.159e-03 0.183 -2.240 GIGYF2 GRB10 interacting GYF protein 2 2 233270258 AB014542 2q37.1 Hs.565319 23

protein binding

 
244345_at 0.353 2.913 3.175 6.187e-03 0.184 -2.244 CADM1 cell adhesion molecule 1 11 -114549554 AI627453 11q23.2 Hs.370510 50

T cell mediated cytotoxicity

receptor binding

receptor binding

plasma membrane

cell-cell junction

apoptosis

immune response

cell adhesion

homophilic cell adhesion

heterophilic cell adhesion

multicellular organismal development

spermatogenesis

protein C-terminus binding

cell recognition

cell recognition

integral to membrane

basolateral plasma membrane

cell differentiation

PDZ domain binding

susceptibility to natural killer cell mediated cytotoxicity

susceptibility to natural killer cell mediated cytotoxicity

protein homodimerization activity

positive regulation of cytokine secretion

activated T cell proliferation

detection of stimulus

detection of stimulus

Cell adhesion molecules (CAMs)

217833_at -0.708 8.199 -3.174 6.194e-03 0.184 -2.245 SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 6 -86380411, -86380411, -86374221, -86374221, -86374221, -86374221 AL520908 6q14-q15 Hs.571177 33

nucleotide binding

RNA binding

protein binding

nucleus

nucleoplasm

spliceosomal complex

cytoplasm

endoplasmic reticulum

microsome

mRNA processing

poly(A) RNA binding

RNA splicing

interspecies interaction between organisms

 
225812_at 0.648 6.637 3.174 6.206e-03 0.184 -2.247 C6orf225 chromosome 6 open reading frame 225 6 112515366 N36759 6q21 Hs.591340 1    
227251_at -0.490 8.734 -3.173 6.210e-03 0.184 -2.248 DCAF5 DDB1 and CUL4 associated factor 5 14 -68587390 AI431597 14q23-q24.1 Hs.509780 6    
205459_s_at 0.449 5.769 3.173 6.213e-03 0.184 -2.248 NPAS2 neuronal PAS domain protein 2 2 100803044 NM_002518 2q11.2 Hs.156832 Hs.705895 23

transcription factor activity

signal transducer activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

signal transduction

central nervous system development

circadian sleep/wake cycle

locomotor rhythm

positive regulation of transcription from RNA polymerase II promoter

rhythmic process

Hsp90 protein binding

Circadian rhythm - mammal

224096_at 0.405 5.557 3.173 6.216e-03 0.184 -2.249 LOC100130797 PRO0566 20   AF116649 20q11.22 Hs.711049      
220935_s_at -0.388 6.696 -3.172 6.220e-03 0.184 -2.249 CDK5RAP2 CDK5 regulatory subunit associated protein 2 9 -122190967 NM_018249 9q33.2 Hs.269560 18

centrosome

cytoskeleton

brain development

microtubule binding

neuronal Cdc2-like kinase binding

regulation of neuron differentiation

 
202558_s_at -0.453 4.897 -3.172 6.221e-03 0.184 -2.249 HSPA13 heat shock protein 70kDa family, member 13 21 -14665307 NM_006948 21q11 21q11.1 Hs.352341 16

nucleotide binding

ATP binding

endoplasmic reticulum

microsome

 
200722_s_at -0.398 6.363 -3.172 6.231e-03 0.184 -2.251 CAPRIN1 cell cycle associated protein 1 11 34029805, 34029805 BG258784 11p13 Hs.471818 10

protein binding

cytoplasm

cytosol

integral to plasma membrane

dendrite

cell projection

 
220419_s_at -0.664 9.493 -3.171 6.240e-03 0.184 -2.252 USP25 ubiquitin specific peptidase 25 21 16024366 NM_013396 21q11.2 Hs.473370 11

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

protein modification process

proteolysis

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
224311_s_at -1.104 5.702 -3.171 6.242e-03 0.184 -2.252 CAB39 calcium binding protein 39 2 231285800, 231286506 AF151824 2q37.1 Hs.632536 14

protein binding

cytoplasm

mTOR signaling pathway

211376_s_at -0.286 6.571 -3.170 6.249e-03 0.184 -2.254 NSMCE4A non-SMC element 4 homolog A (S. cerevisiae) 10 -123706592 BC005212 10q26.13 Hs.258798 8    
203547_at 0.377 6.362 3.169 6.259e-03 0.184 -2.255 CD4 CD4 molecule 12 6768911 U47924 12pter-p12 Hs.631659 992

conjugation with cellular fusion

cytokine production

glycoprotein binding

transmembrane receptor activity

extracellular matrix structural constituent

early endosome

endoplasmic reticulum lumen

endoplasmic reticulum membrane

endoplasmic reticulum membrane

plasma membrane

plasma membrane

protein amino acid N-linked glycosylation

immune response

cell adhesion

transmembrane receptor protein tyrosine kinase signaling pathway

zinc ion binding

external side of plasma membrane

coreceptor activity

integral to membrane

initiation of viral infection

protein kinase binding

T cell receptor complex

MHC class II protein binding

protein homodimerization activity

interspecies interaction between organisms

T cell selection

positive regulation of interleukin-2 biosynthetic process

membrane raft

positive regulation of protein kinase activity

positive regulation of peptidyl-tyrosine phosphorylation

positive regulation of calcium-mediated signaling

positive regulation of T cell activation

response to protein stimulus

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Hematopoietic cell lineage

T cell receptor signaling pathway

Primary immunodeficiency

210759_s_at -0.330 9.928 -3.169 6.269e-03 0.184 -2.256 PSMA1 proteasome (prosome, macropain) subunit, alpha type, 1 11 -14492087, -14482998, -14482998 M64992 11p15.1 Hs.102798 Hs.445711 52

RNA binding

threonine-type endopeptidase activity

protein binding

nucleus

cytoplasm

cytosol

proteasome core complex

polysome

ubiquitin-dependent protein catabolic process

peptidase activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

proteolysis involved in cellular protein catabolic process

Proteasome

200768_s_at -0.428 8.543 -3.169 6.270e-03 0.184 -2.257 MAT2A methionine adenosyltransferase II, alpha 2 85619798 BC001686 2p11.2 Hs.516157 18

nucleotide binding

magnesium ion binding

methionine adenosyltransferase activity

protein binding

ATP binding

S-adenosylmethionine biosynthetic process

one-carbon metabolic process

circadian rhythm

response to light stimulus

response to hormone stimulus

transferase activity

potassium ion binding

response to drug

cobalt ion binding

response to cAMP

Cysteine and methionine metabolism

Selenoamino acid metabolism

Biosynthesis of plant hormones

Metabolic pathways

221535_at -0.449 6.843 -3.168 6.277e-03 0.184 -2.258 LSG1 large subunit GTPase 1 homolog (S. cerevisiae) 3 -195842806 AL136897 3q29 Hs.518505 12

nucleotide binding

GTP binding

intracellular

nucleus

cytoplasm

endoplasmic reticulum

Cajal body

protein transport

hydrolase activity

nuclear export

 
210774_s_at -0.468 10.935 -3.168 6.280e-03 0.184 -2.258 NCOA4 nuclear receptor coactivator 4 10 51235113, 51242369, 51246290 AL162047 10q11.2 Hs.643658 Hs.709644 43

transcription coactivator activity

protein binding

nucleus

male gonad development

androgen receptor signaling pathway

regulation of transcription

positive regulation of transcription, DNA-dependent

androgen receptor binding

Pathways in cancer

Thyroid cancer

202846_s_at -0.477 6.658 -3.167 6.292e-03 0.185 -2.260 PIGC phosphatidylinositol glycan anchor biosynthesis, class C 1 -170677219 NM_002642 1q23-q25 Hs.188456 12

endoplasmic reticulum

endoplasmic reticulum membrane

membrane

integral to membrane

preassembly of GPI anchor in ER membrane

transferase activity, transferring glycosyl groups

phosphatidylinositol N-acetylglucosaminyltransferase activity

Glycosylphosphatidylinositol(GPI)-anchor biosynthesis

Metabolic pathways

226083_at -1.033 7.027 -3.165 6.311e-03 0.185 -2.262 TMEM70 transmembrane protein 70 8 75050983 AA886902 8q21.11 Hs.106650 7

molecular_function

mitochondrion

membrane

integral to membrane

integral to mitochondrial membrane

mitochondrial proton-transporting ATP synthase complex assembly

 
212392_s_at -1.171 6.396 -3.165 6.320e-03 0.185 -2.264 PDE4DIP phosphodiesterase 4D interacting protein 1 -143663117, -143663117, -143601947, -143601947, -143562783 AI950145 1q12 Hs.584841 Hs.613082 Hs.657186 Hs.657490 Hs.719077 10

nucleus

cytoplasm

Golgi apparatus

centrosome

 
212041_at -0.535 8.805 -3.164 6.323e-03 0.185 -2.264 ATP6V0D1 ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1 16 -66029417 AL566172 16q22 Hs.106876 21

protein binding

ion transport

hydrogen-exporting ATPase activity, phosphorylative mechanism

ATP synthesis coupled proton transport

proton transport

membrane

vacuolar proton-transporting V-type ATPase complex

vacuolar proton-transporting V-type ATPase complex

proton-transporting V-type ATPase, V0 domain

Oxidative phosphorylation

Metabolic pathways

Lysosome

Vibrio cholerae infection

Epithelial cell signaling in Helicobacter pylori infection

226902_at -0.543 10.746 -3.164 6.327e-03 0.185 -2.265 USP13 ubiquitin specific peptidase 13 (isopeptidase T-3) 3 180853626 BF109140 3q26.2-q26.3 Hs.175322 11

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

ubiquitin-dependent protein catabolic process

peptidase activity

zinc ion binding

metal ion binding

 
215505_s_at -0.786 5.422 -3.164 6.329e-03 0.185 -2.265 STRN3 striatin, calmodulin binding protein 3 14 -30432755 AF243424 14q13-q21 Hs.21016 Hs.401843 13

calmodulin binding

membrane fraction

nucleus

cytoplasm

cytosol

cell cycle

membrane

 
203115_at -0.792 5.892 -3.164 6.332e-03 0.185 -2.266 FECH ferrochelatase (protoporphyria) 18 -53363070 AU152635 18q21.3 Hs.365365 61

ferrochelatase activity

ferrochelatase activity

protein binding

mitochondrion

mitochondrial inner membrane

mitochondrial matrix

generation of precursor metabolites and energy

heme biosynthetic process

ferrous iron binding

response to light stimulus

detection of UV

membrane

protoporphyrinogen IX metabolic process

metal ion binding

2 iron, 2 sulfur cluster binding

Porphyrin and chlorophyll metabolism

Metabolic pathways

215711_s_at -0.703 5.266 -3.163 6.336e-03 0.185 -2.266 WEE1 WEE1 homolog (S. pombe) 11 9551803, 9552809 AJ277546 11p15.3-p15.1 Hs.249441 61

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

non-membrane spanning protein tyrosine kinase activity

protein binding

ATP binding

nucleus

nucleoplasm

protein amino acid phosphorylation

cell cycle

mitosis

transferase activity

cell division

Cell cycle

1552731_at -1.674 8.049 -3.162 6.357e-03 0.186 -2.269 ABRA actin-binding Rho activating protein 8 -107840886 NM_139166 8q23.1 Hs.374668 12

protein import into nucleus, translocation

transcription coactivator activity

actin binding

cytoplasm

plasma membrane

protein transport

actin cytoskeleton

sarcomere

positive regulation of Rho protein signal transduction

positive regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

positive regulation of transcription factor activity

intracellular protein transmembrane transport

 
222130_s_at -0.492 6.905 -3.159 6.389e-03 0.186 -2.274 FTSJ2 FtsJ homolog 2 (E. coli) 7 -2240451 AK024635 7p22 Hs.279877 4

nucleic acid binding

nucleus

nucleolus

rRNA processing

RNA methyltransferase activity

transferase activity

rRNA methylation

methylation

 
1552767_a_at -1.989 5.544 -3.159 6.391e-03 0.186 -2.274 HS6ST2 heparan sulfate 6-O-sulfotransferase 2 X -131587718 NM_147174 Xq26.2 Hs.385956 7

sulfotransferase activity

membrane

integral to membrane

transferase activity

Heparan sulfate biosynthesis

219874_at 0.384 4.129 3.159 6.393e-03 0.186 -2.274 SLC12A8 solute carrier family 12 (potassium/chloride transporters), member 8 3 -126284169 NM_024628 3q21.2 Hs.658514 7

ion transport

potassium ion transport

symporter activity

membrane

integral to membrane

potassium ion binding

chloride ion binding

 
208640_at -0.431 10.558 -3.159 6.398e-03 0.186 -2.275 RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 7 6380650 BG292367 7p22 Hs.413812 406

nucleotide binding

GTPase activity

GTP binding

intracellular

cytosol

plasma membrane

cell motion

inflammatory response

cell adhesion

small GTPase mediated signal transduction

anatomical structure morphogenesis

regulation of hydrogen peroxide metabolic process

positive regulation of lamellipodium assembly

enzyme binding

actin filament polymerization

GTP-dependent protein binding

ruffle organization

positive regulation of Rho protein signal transduction

melanosome

negative regulation of receptor-mediated endocytosis

localization within membrane

regulation of respiratory burst

MAPK signaling pathway

Chemokine signaling pathway

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Focal adhesion

Adherens junction

Toll-like receptor signaling pathway

Natural killer cell mediated cytotoxicity

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Amyotrophic lateral sclerosis (ALS)

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

201408_at -0.749 9.614 -3.159 6.398e-03 0.186 -2.275 PPP1CB protein phosphatase 1, catalytic subunit, beta isoform 2 28828117, 28828129 W67887 2p23 Hs.591571 Hs.702907 42

protein serine/threonine phosphatase activity

iron ion binding

protein binding

cytoplasm

carbohydrate metabolic process

glycogen metabolic process

protein amino acid dephosphorylation

cell cycle

hydrolase activity

manganese ion binding

metal ion binding

cell division

MLL5-L complex

Vascular smooth muscle contraction

Focal adhesion

Long-term potentiation

Regulation of actin cytoskeleton

Insulin signaling pathway

1562799_at 0.360 5.444 3.158 6.413e-03 0.186 -2.277 LOC100130285 hypothetical LOC100130285 16   AK097604 16p13.3 Hs.683811 1    
234284_at 0.311 3.864 3.158 6.413e-03 0.186 -2.277 GNG8 guanine nucleotide binding protein (G protein), gamma 8 19 -51829172 AF188179 19q13.2-q13.3 Hs.283961 5

GTPase activity

signal transducer activity

extracellular region

heterotrimeric G-protein complex

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

hormone-mediated signaling

Chemokine signaling pathway

228829_at -0.760 6.651 -3.157 6.416e-03 0.186 -2.278 ATF7 activating transcription factor 7 12 -52192109, -52192109 AI279868 12q13 Hs.12286 18

transcription factor activity

intracellular

nucleus

cytoplasm

regulation of transcription, DNA-dependent

zinc ion binding

sequence-specific DNA binding

metal ion binding

protein dimerization activity

 
227379_at 0.541 5.055 3.157 6.419e-03 0.186 -2.278 MBOAT1 membrane bound O-acyltransferase domain containing 1 6 -20208913 AI734993 6p22.3 Hs.377830 7

acyltransferase activity

phospholipid biosynthetic process

membrane

integral to membrane

transferase activity

 
230129_at -0.577 5.099 -3.157 6.420e-03 0.186 -2.278 PSTK phosphoseryl-tRNA kinase 10 124729545 BF589448 10q26.13 Hs.281004 4

nucleotide binding

magnesium ion binding

ATP binding

translation

kinase activity

transferase activity

phosphotransferase activity, alcohol group as acceptor

Aminoacyl-tRNA biosynthesis

218955_at -0.370 7.480 -3.156 6.434e-03 0.186 -2.280 BRF2 BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like 8 -37820560 NM_018310 8p11.23 Hs.709301 11

protein binding

nucleus

transcription factor complex

transcription initiation

regulation of transcription, DNA-dependent

zinc ion binding

transcription regulator activity

metal ion binding

 
210896_s_at -0.528 5.196 -3.155 6.442e-03 0.187 -2.281 ASPH aspartate beta-hydroxylase 8 -62739837, -62699648, -62699648, -62575669 AF306765 8q12.1 Hs.591874 24

peptide-aspartate beta-dioxygenase activity

binding

iron ion binding

calcium ion binding

endoplasmic reticulum

endoplasmic reticulum membrane

muscle contraction

pattern specification process

negative regulation of cell proliferation

structural constituent of muscle

electron carrier activity

membrane

integral to membrane

oxidoreductase activity

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

peptidyl-amino acid modification

integral to endoplasmic reticulum membrane

limb morphogenesis

peptidyl-aspartic acid hydroxylation

oxidation reduction

palate development

face morphogenesis

 
1552430_at 0.296 2.228 3.155 6.450e-03 0.187 -2.282 WDR17 WD repeat domain 17 4 177224125 NM_170710 4q34 Hs.532056 3    
217365_at 0.329 4.164 3.154 6.455e-03 0.187 -2.283 PRAMEF11 PRAME family member 11 1 -12807054 AL022101 1p36.21 Hs.551617 2    
226607_at -0.977 8.310 -3.154 6.458e-03 0.187 -2.283 C20orf194 chromosome 20 open reading frame 194 20 -3177947 AI498144 20p13 Hs.516853 7    
236328_at 0.415 4.744 3.154 6.463e-03 0.187 -2.284 ZNF285A zinc finger protein 285A 19 -49581647 AW513227   Hs.709428 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
207968_s_at -0.976 6.288 -3.154 6.467e-03 0.187 -2.285 MEF2C myocyte enhancer factor 2C 5 -88049814, -88049814 NM_002397 5q14 Hs.653394 56

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription, DNA-dependent

apoptosis

multicellular organismal development

nervous system development

muscle organ development

negative regulation of specific transcription from RNA polymerase II promoter

nuclear speck

cell differentiation

sequence-specific DNA binding

positive regulation of survival gene product expression

MAPK signaling pathway

210622_x_at -0.357 5.865 -3.153 6.470e-03 0.187 -2.285 CDK10 cyclin-dependent kinase 10 16 88280576 AF153430 16q24 Hs.699177 16

nucleotide binding

cyclin-dependent protein kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

traversing start control point of mitotic cell cycle

negative regulation of cell proliferation

transferase activity

 
224385_s_at 0.273 3.337 3.153 6.477e-03 0.187 -2.286 MOV10L1 Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse) 22 48870561, 48870811, 48927610 AF285604 22q13.33 Hs.62880 7

nucleotide binding

magnesium ion binding

RNA binding

ATP-dependent RNA helicase activity

helicase activity

ATP binding

intracellular

multicellular organismal development

germ cell development

spermatogenesis

muscle organ development

cell proliferation

hydrolase activity

negative regulation of cell cycle

 
203810_at -0.825 8.517 -3.153 6.479e-03 0.187 -2.286 DNAJB4 DnaJ (Hsp40) homolog, subfamily B, member 4 1 78243223 BG252490 1p31.1 Hs.13852 11

protein folding

response to unfolded protein

response to heat

heat shock protein binding

unfolded protein binding

 
202174_s_at -0.532 9.124 -3.148 6.537e-03 0.188 -2.295 PCM1 pericentriolar material 1 8 17824645 NM_006197 8p22-p21.3 Hs.491148 36

pericentriolar material

protein binding

cytoplasm

cytoskeleton

nonmotile primary cilium

centriolar satellite

cilium assembly

cilium assembly

centrosome organization

 
1554217_a_at -0.548 2.834 -3.148 6.540e-03 0.188 -2.295 CCDC132 coiled-coil domain containing 132 7 92699588, 92699588 BC017888 7q21.3 Hs.222282 5    
201944_at -0.496 7.742 -3.148 6.541e-03 0.188 -2.295 HEXB hexosaminidase B (beta polypeptide) 5 74016724 NM_000521 5q13 Hs.69293 66

skeletal system development

acrosomal vesicle

hydrolase activity, hydrolyzing O-glycosyl compounds

beta-N-acetylhexosaminidase activity

lysosome

carbohydrate metabolic process

glycosphingolipid metabolic process

ganglioside catabolic process

cellular calcium ion homeostasis

lysosome organization

penetration of zona pellucida

sensory perception of sound

locomotory behavior

male courtship behavior

metabolic process

phospholipid biosynthetic process

oligosaccharide catabolic process

membrane

lipid storage

sexual reproduction

glycosaminoglycan metabolic process

regulation of cellular metabolic process

myelination

protein homodimerization activity

cation binding

cellular protein metabolic process

protein heterodimerization activity

oogenesis

neuromuscular process controlling balance

Other glycan degradation

Amino sugar and nucleotide sugar metabolism

Glycosaminoglycan degradation

Glycosphingolipid biosynthesis - globo series

Glycosphingolipid biosynthesis - ganglio series

Metabolic pathways

Lysosome

227395_at -0.825 5.119 -3.147 6.548e-03 0.188 -2.296 TBCEL tubulin folding cofactor E-like 11 120400012, 120400022 BE672045 11q23.3 Hs.504136 4

cytoplasm

cytoskeleton

 
208818_s_at -0.661 8.197 -3.147 6.556e-03 0.188 -2.297 COMT catechol-O-methyltransferase 22 18309262, 18318459, 18319044, 18330069 BC000419 22q11.21 22q11.21-q11.23 Hs.370408 Hs.704514 Hs.713616 742

magnesium ion binding

protein binding

soluble fraction

cytoplasm

microsome

cytosol

plasma membrane

catecholamine metabolic process

integral to membrane

catechol O-methyltransferase activity

catechol O-methyltransferase activity

transferase activity

neurotransmitter catabolic process

dopamine catabolic process

Tyrosine metabolism

Betalain biosynthesis

Metabolic pathways

222918_at -0.630 7.490 -3.145 6.578e-03 0.188 -2.300 RAB9B RAB9B, member RAS oncogene family X -102966606 AL139228 Xq22.1-q22.3 Hs.522736 Hs.679046 5

nucleotide binding

protein binding

GTP binding

cellular_component

plasma membrane

Golgi to endosome transport

small GTPase mediated signal transduction

protein transport

 
203442_x_at 0.421 5.518 3.145 6.578e-03 0.188 -2.300 EML3 echinoderm microtubule associated protein like 3 11 -62126266 AA478965 11q12.3 Hs.379785 8

protein binding

cytoplasm

microtubule

 
230588_s_at -1.023 5.660 -3.145 6.582e-03 0.188 -2.301 LOC285074 anaphase promoting complex subunit 1 pseudogene 2 -87111310 AA906142 2p11.2 Hs.424184 2    
225391_at -0.679 6.747 -3.145 6.585e-03 0.188 -2.301 LOC93622 hypothetical LOC93622 4   AL562398 4p16.1 Hs.705429 1    
201947_s_at -0.534 8.984 -3.144 6.593e-03 0.189 -2.302 CCT2 chaperonin containing TCP1, subunit 2 (beta) 12 68265474 NM_006431 12q15 Hs.189772 19

nucleotide binding

ATP binding

nucleus

nucleolus

cytoplasm

cytosol

chaperonin-containing T-complex

protein folding

unfolded protein binding

 
213947_s_at 0.292 6.219 3.143 6.607e-03 0.189 -2.304 NUP210 nucleoporin 210kDa 3 -13332736 AI867102 3p25.1 Hs.475525 24

protein binding

nucleus

nuclear pore

endoplasmic reticulum

protein transport

membrane

integral to membrane

mRNA transport

intracellular protein transmembrane transport

 
229452_at 0.459 7.104 3.143 6.611e-03 0.189 -2.305 TMEM88 transmembrane protein 88 17 7699108 AL544576 17p13.1 Hs.389669 2

membrane

integral to membrane

 
220761_s_at -0.454 6.337 -3.142 6.620e-03 0.189 -2.306 TAOK3 TAO kinase 3 12 -117071988 NM_016281 12q Hs.644420 10

nucleotide binding

protein serine/threonine kinase activity

protein kinase inhibitor activity

ATP binding

cytoplasm

mitochondrion

plasma membrane

transferase activity

negative regulation of JNK cascade

positive regulation of JNK cascade

protein amino acid autophosphorylation

MAPK signaling pathway

213753_x_at -0.612 8.952 -3.141 6.639e-03 0.189 -2.309 EIF5A eukaryotic translation initiation factor 5A 17 7151041, 7151579, 7152011, 7152417 BF541557 17p13-p12 Hs.534314 52

RNA binding

translation initiation factor activity

translation elongation factor activity

nucleus

annulate lamellae

nuclear pore

cytoplasm

endoplasmic reticulum

cytosol

mRNA export from nucleus

translation

translational frameshifting

protein export from nucleus

nucleocytoplasmic transport

nucleocytoplasmic transport

induction of apoptosis

cell proliferation

peptidyl-lysine modification to hypusine

peptidyl-lysine modification to hypusine

protein transport

membrane

U6 snRNA binding

viral genome replication

ribosome binding

positive regulation of translational elongation

positive regulation of translational termination

positive regulation of translational initiation

protein N-terminus binding

intracellular protein transmembrane transport

 
1569157_s_at 0.803 4.499 3.141 6.640e-03 0.189 -2.309 ZNF846 zinc finger protein 846 19 -9729150 BC037359 19p13.2 Hs.665717 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
238635_at 0.360 2.314 3.141 6.640e-03 0.189 -2.309 C5orf28 chromosome 5 open reading frame 28 5 -43480110 W72333 5p12 Hs.558531 5

membrane

integral to membrane

 
221755_at -0.454 7.999 -3.140 6.642e-03 0.189 -2.309 EHBP1L1 EH domain binding protein 1-like 1 11 65100084 BG334196 11q13.1 Hs.502867 4    
209759_s_at 0.509 9.160 3.140 6.645e-03 0.189 -2.309 DCI dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenzyme A isomerase) 16 -2229898 BC002746 16p13.3 Hs.403436 6

dodecenoyl-CoA delta-isomerase activity

mitochondrion

mitochondrial inner membrane

mitochondrial matrix

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

metabolic process

isomerase activity

Fatty acid metabolism

221733_s_at 0.324 4.038 3.139 6.659e-03 0.189 -2.311 GPATCH4 G patch domain containing 4 1 -154830902 BE546897 1q22 Hs.193832 Hs.708599 3

nucleic acid binding

intracellular

 
216304_x_at -0.410 9.276 -3.139 6.661e-03 0.189 -2.312 YME1L1 YME1-like 1 (S. cerevisiae) 10 -27439388 AJ295618 10p14 Hs.499145 Hs.74647 9

nucleotide binding

metalloendopeptidase activity

ATP binding

mitochondrion

proteolysis

peptidase activity

zinc ion binding

membrane

nucleoside-triphosphatase activity

metal ion binding

 
218472_s_at -0.512 7.188 -3.139 6.668e-03 0.189 -2.313 PELO pelota homolog (Drosophila) 5 52119530 NM_015946 5q11.2 Hs.644352 Hs.669791 9

endonuclease activity

protein binding

nucleus

cytoplasm

translation

cell cycle

cell proliferation

hydrolase activity

metal ion binding

chromosome organization

cell division

 
220547_s_at -0.455 7.160 -3.138 6.670e-03 0.189 -2.313 FAM35A family with sequence similarity 35, member A 10 88844932 NM_019054 10q23.2 Hs.500419 6    
234937_x_at 0.462 4.384 3.138 6.673e-03 0.189 -2.313 ZFP28 zinc finger protein 28 homolog (mouse) 19 61742128 AC007228   Hs.14794 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
222558_at -0.561 5.536 -3.138 6.675e-03 0.189 -2.314 RPRD1A regulation of nuclear pre-mRNA domain containing 1A 18 -31823789 T79568 18q12.2 Hs.464912 3    
219377_at -0.498 6.182 -3.137 6.690e-03 0.190 -2.316 FAM59A family with sequence similarity 59, member A 18 -28101474 NM_022751 18q12.1 Hs.444314 7    
240486_at 0.285 4.261 3.137 6.697e-03 0.190 -2.317 HELZ helicase with zinc finger 17 -62497015 AA761673 17q24.2 Hs.370140 Hs.569824 Hs.596366 8

nucleotide binding

nucleic acid binding

helicase activity

ATP binding

nucleus

zinc ion binding

hydrolase activity

metal ion binding

 
229405_at 0.426 5.161 3.135 6.714e-03 0.190 -2.319 KIF7 kinesin family member 7 15 -87972204 BF515033 15q26.1 Hs.513134 5

nucleotide binding

microtubule motor activity

ATP binding

microtubule-based movement

 
200685_at -0.402 7.117 -3.135 6.714e-03 0.190 -2.319 SFRS11 splicing factor, arginine/serine-rich 11 1 70443952 AU146237 1p31 Hs.479693 13

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

nucleolus

RNA splicing

 
227705_at 1.214 5.007 3.135 6.715e-03 0.190 -2.319 TCEAL7 transcription elongation factor A (SII)-like 7 X 102471820 BF591534 Xq22.1 Hs.21861 7

nucleus

regulation of transcription

 
213597_s_at 0.279 2.947 3.135 6.715e-03 0.190 -2.319 CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like 3 37878672 BF002474 3p21.3 Hs.475963 18

molecular_function

phosphoprotein phosphatase activity

cellular_component

nucleus

biological_process

hydrolase activity

 
1561281_a_at 0.353 3.189 3.135 6.716e-03 0.190 -2.319 LOC284576 hypothetical protein LOC284576 1   AK090497 1q32.1 Hs.585440 1    
221430_s_at -0.704 6.086 -3.135 6.719e-03 0.190 -2.320 RNF146 ring finger protein 146 6 127629712 NM_030963 6q22.1-q22.33 Hs.267120 12

protein binding

zinc ion binding

metal ion binding

 
210298_x_at -0.870 11.878 -3.135 6.724e-03 0.190 -2.320 FHL1 four and a half LIM domains 1 X 135056526, 135057224, 135058402, 135079120, 135079731, 135106578, 135106720 AF098518 Xq26 Hs.435369 38

molecular_function

cellular_component

nucleus

cytoplasm

cytosol

multicellular organismal development

muscle organ development

zinc ion binding

organ morphogenesis

cell growth

cell differentiation

metal ion binding

 
224336_s_at -0.475 5.069 -3.134 6.728e-03 0.190 -2.321 DUSP16 dual specificity phosphatase 16 12 -12520097 AB052156 12p13 Hs.536535 12

inactivation of MAPK activity

protein tyrosine phosphatase activity

protein binding

nucleus

cytoplasm

protein amino acid dephosphorylation

hydrolase activity

MAP kinase tyrosine/serine/threonine phosphatase activity

MAPK export from nucleus

MAPK phosphatase export from nucleus, leptomycin B sensitive

MAPK signaling pathway

220510_at 0.381 6.815 3.133 6.743e-03 0.190 -2.323 RHBG Rh family, B glycoprotein (gene/pseudogene) 1 154605626 NM_020407 1q21.3 Hs.131835 16

plasma membrane

integral to plasma membrane

transport

ammonium transmembrane transporter activity

spectrin-associated cytoskeleton

basolateral plasma membrane

basolateral plasma membrane

ankyrin binding

cytoplasmic vesicle

anchored to plasma membrane

ammonia transporter activity

ammonia transporter activity

transepithelial ammonium transport

 
209785_s_at -0.684 9.028 -3.133 6.745e-03 0.190 -2.323 PLA2G4C phospholipase A2, group IVC (cytosolic, calcium-independent) 19 -53242912 AF065214 19q13.3 Hs.631562 22

phospholipid binding

cytosol

inflammatory response

intracellular signaling cascade

parturition

metabolic process

membrane

lipid catabolic process

hydrolase activity

arachidonic acid metabolic process

glycerophospholipid catabolic process

calcium-independent phospholipase A2 activity

 
209863_s_at -0.752 6.267 -3.133 6.748e-03 0.190 -2.323 TP63 tumor protein p63 3 190831909, 190831909, 190990142, 190990142 AF091627 3q28 Hs.137569 238

response to tumor cell

transcription factor activity

nucleus

nucleus

cytoplasm

apoptosis

induction of apoptosis

multicellular organismal development

zinc ion binding

transcription activator activity

transcription activator activity

transcription repressor activity

negative regulation of cell growth

identical protein binding

positive regulation of Notch signaling pathway

negative regulation of transcription, DNA-dependent

positive regulation of transcription, DNA-dependent

metal ion binding

protein homotetramerization

 
212791_at -0.404 6.242 -3.132 6.761e-03 0.190 -2.325 C1orf216 chromosome 1 open reading frame 216 1 -35952063 AL042729 1p34.3 Hs.112023 3    
228024_at -0.511 6.593 -3.130 6.785e-03 0.190 -2.329 VPS37A vacuolar protein sorting 37 homolog A (S. cerevisiae) 8 17148771 AW028100 8p22 Hs.343873 Hs.512464 8

nucleus

endosome

protein transport

membrane

Endocytosis

222916_s_at -0.476 5.661 -3.130 6.790e-03 0.190 -2.329 HDLBP high density lipoprotein binding protein 2 -241815351, -241815351 AF116718 2q37.3 Hs.471851 25

RNA binding

protein binding

nucleus

cytoplasm

plasma membrane

lipid metabolic process

lipid transport

steroid metabolic process

cholesterol metabolic process

lipid binding

high-density lipoprotein particle

 
213726_x_at -0.739 8.850 -3.130 6.790e-03 0.190 -2.329 TUBB2C tubulin, beta 2C 9 139255531 AA515698 9q34 Hs.433615 25

nucleotide binding

GTPase activity

structural molecule activity

GTP binding

cytoskeleton

microtubule

cell motion

microtubule-based movement

natural killer cell mediated cytotoxicity

MHC class I protein binding

protein complex

unfolded protein binding

protein polymerization

Gap junction

Pathogenic Escherichia coli infection - EHEC

210540_s_at -0.656 3.874 -3.130 6.790e-03 0.190 -2.329 B4GALT4 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4 3 -120413278 BC004523 3q13.3 Hs.13225 14

N-acetyllactosamine synthase activity

Golgi apparatus

carbohydrate metabolic process

membrane lipid metabolic process

galactosyltransferase activity

membrane

integral to membrane

transferase activity, transferring glycosyl groups

manganese ion binding

metal ion binding

Keratan sulfate biosynthesis

Glycosphingolipid biosynthesis - lacto and neolacto series

Metabolic pathways

224694_at -0.857 7.193 -3.129 6.799e-03 0.190 -2.330 ANTXR1 anthrax toxin receptor 1 2 69093779, 69093779, 69093779 AF279145 2p13.1 Hs.165859 24

transmembrane receptor activity

collagen binding

membrane

integral to membrane

lamellipodium membrane

filopodium membrane

actin cytoskeleton reorganization

substrate adhesion-dependent cell spreading

metal ion binding

actin filament binding

 
1558315_s_at -0.523 3.268 -3.129 6.804e-03 0.190 -2.331 HOOK3 hook homolog 3 (Drosophila) 8 42871189 AV710762 8p11.21 Hs.162852 13

cytoplasm

Golgi apparatus

cis-Golgi network

cytoskeleton

microtubule

endosome organization

lysosome organization

microtubule binding

endosome to lysosome transport

protein transport

HOPS complex

cytoplasmic microtubule organization

identical protein binding

early endosome to late endosome transport

Golgi localization

FHF complex

 
209089_at -0.375 9.034 -3.128 6.808e-03 0.190 -2.332 RAB5A RAB5A, member RAS oncogene family 3 19963575 BC001267 3p24-p22 Hs.475663 73

nucleotide binding

ruffle

GTPase activity

protein binding

protein binding

GTP binding

early endosome

plasma membrane

endocytosis

small GTPase mediated signal transduction

protein transport

guanyl nucleotide binding

endocytic vesicle

melanosome

membrane raft

Endocytosis

Amyotrophic lateral sclerosis (ALS)

203013_at -0.372 6.639 -3.128 6.808e-03 0.190 -2.332 ECD ecdysoneless homolog (Drosophila) 10 -74564288 NM_007265 10q22.1-q22.2 Hs.631822 11

transcription coactivator activity

nucleus

cytoplasm

regulation of glycolysis

transcription from RNA polymerase II promoter

regulation of transcription

 
201705_at -0.429 9.932 -3.128 6.810e-03 0.190 -2.332 PSMD7 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 16 72888181 NM_002811 16q23-q24 Hs.440604 47

proteasome complex

protein binding

cytosol

proteasome regulatory particle

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

209031_at 0.959 6.696 3.128 6.816e-03 0.191 -2.333 CADM1 cell adhesion molecule 1 11 -114549554 AL519710 11q23.2 Hs.370510 50

T cell mediated cytotoxicity

receptor binding

receptor binding

plasma membrane

cell-cell junction

apoptosis

immune response

cell adhesion

homophilic cell adhesion

heterophilic cell adhesion

multicellular organismal development

spermatogenesis

protein C-terminus binding

cell recognition

cell recognition

integral to membrane

basolateral plasma membrane

cell differentiation

PDZ domain binding

susceptibility to natural killer cell mediated cytotoxicity

susceptibility to natural killer cell mediated cytotoxicity

protein homodimerization activity

positive regulation of cytokine secretion

activated T cell proliferation

detection of stimulus

detection of stimulus

Cell adhesion molecules (CAMs)

212403_at -0.514 7.503 -3.127 6.828e-03 0.191 -2.334 UBE3B ubiquitin protein ligase E3B 12 108399821 AI749193 12q24.11 Hs.374067 8

intracellular

protein modification process

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

Ubiquitin mediated proteolysis

226617_at -0.722 8.348 -3.126 6.837e-03 0.191 -2.336 ARL5A ADP-ribosylation factor-like 5A 2 -152365725 AW291264 2q23.3 Hs.470233 6

nucleotide binding

GTP binding

intracellular

small GTPase mediated signal transduction

 
200723_s_at -0.433 8.059 -3.126 6.839e-03 0.191 -2.336 CAPRIN1 cell cycle associated protein 1 11 34029805, 34029805 NM_005898 11p13 Hs.471818 10

protein binding

cytoplasm

cytosol

integral to plasma membrane

dendrite

cell projection

 
223187_s_at -0.328 7.516 -3.126 6.845e-03 0.191 -2.337 ORMDL1 ORM1-like 1 (S. cerevisiae) 2 -190343237 BC005200 2q32 Hs.709387 7

endoplasmic reticulum

endoplasmic reticulum membrane

membrane

integral to membrane

 
242919_at 0.608 5.598 3.126 6.848e-03 0.191 -2.337 ZNF253 zinc finger protein 253 19 19837713 AV683221 19p13.11 Hs.659321 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

transcription repressor activity

metal ion binding

 
209214_s_at -0.360 8.040 -3.125 6.860e-03 0.191 -2.339 EWSR1 Ewing sarcoma breakpoint region 1 22 27993997, 27993997 BC004817 22q12.2 Hs.374477 90

nucleotide binding

RNA binding

calmodulin binding

intracellular

nucleus

cytoplasm

plasma membrane

zinc ion binding

regulation of transcription

metal ion binding

 
227031_at -0.557 7.445 -3.125 6.861e-03 0.191 -2.339 SNX13 sorting nexin 13 7 -17796910 AV681975 7p21.1 Hs.487648 10

signal transducer activity

protein binding

cell communication

negative regulation of signal transduction

protein transport

phosphoinositide binding

 
207154_at 0.386 6.219 3.124 6.876e-03 0.191 -2.341 DIO3 deiodinase, iodothyronine, type III 14 101097440 NM_001362 14q32 Hs.49322 19

thyroxine 5'-deiodinase activity

cellular_component

endosome

plasma membrane

biological_process

selenium binding

integral to membrane

thyroxine 5-deiodinase activity

positive regulation of multicellular organism growth

thyroid hormone catabolic process

hormone biosynthetic process

oxidation reduction

 
226439_s_at 0.724 5.936 3.123 6.881e-03 0.191 -2.341 NBEA neurobeachin 13 34414455 AI246710 13q13 Hs.491172 11

protein binding

cytoplasm

trans-Golgi network

cytosol

plasma membrane

protein localization

endomembrane system

protein kinase binding

 
235093_at -0.475 7.225 -3.123 6.881e-03 0.191 -2.341 PEX13 peroxisomal biogenesis factor 13 2 61098315 BE564430 2p14-p16 Hs.161377 21

fatty acid alpha-oxidation

neuron migration

suckling behavior

protein binding

membrane fraction

peroxisome

peroxisomal membrane

integral to peroxisomal membrane

locomotory behavior

protein transport

membrane

integral to membrane

protein import into peroxisome matrix, docking

protein import into peroxisome matrix, docking

cerebral cortex cell migration

microtubule-based peroxisome localization

 
211969_at -0.440 11.215 -3.123 6.892e-03 0.191 -2.343 HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 14 -101616827, -101616827 BG420237 14q32.33 Hs.525600 Hs.700831 275

nucleotide binding

ATP binding

cytoplasm

cytosol

cytosol

mitochondrial transport

response to unfolded protein

signal transduction

nitric-oxide synthase regulator activity

TPR domain binding

TPR domain binding

cellular chaperone-mediated protein complex assembly

protein refolding

melanosome

protein homodimerization activity

positive regulation of nitric oxide biosynthetic process

unfolded protein binding

mitochondrial outer membrane translocase complex assembly

Antigen processing and presentation

Pathways in cancer

Prostate cancer

210954_s_at -0.455 4.063 -3.122 6.895e-03 0.191 -2.343 TSC22D2 TSC22 domain family, member 2 3 151609477 AF201292 3q25.1 Hs.665220 Hs.715600 5

transcription factor activity

regulation of transcription, DNA-dependent

 
216100_s_at -1.102 4.756 -3.121 6.909e-03 0.191 -2.345 TOR1AIP1 torsin A interacting protein 1 1 178118042 BG289527 1q24.2 Hs.496459 9

nucleus

membrane

integral to membrane

 
1558487_a_at 0.493 7.829 3.121 6.911e-03 0.191 -2.345 TMED4 transmembrane emp24 protein transport domain containing 4 7 -44585286 AK074557 7p13 Hs.598832 Hs.715273 11

endoplasmic reticulum

transport

membrane

integral to membrane

 
205029_s_at -1.917 4.768 -3.121 6.918e-03 0.191 -2.346 FABP7 fatty acid binding protein 7, brain 6 123142344 NM_001446 6q22-q23 Hs.26770 28

transporter activity

cytoplasm

transport

nervous system development

negative regulation of cell proliferation

lipid binding

PPAR signaling pathway

210638_s_at -0.337 8.833 -3.121 6.919e-03 0.191 -2.346 FBXO9 F-box protein 9 6 53037754, 53038215, 53043729 AF176704 6p12.3-p11.2 Hs.216653 9

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein ubiquitination

modification-dependent protein catabolic process

 
220248_x_at -0.342 9.150 -3.120 6.923e-03 0.191 -2.347 NSFL1C NSFL1 (p97) cofactor (p47) 20 -1370810 NM_018839 20p13 Hs.12865 20

protein binding

nucleus

Golgi apparatus

Golgi stack

lipid binding

 
209695_at 0.642 9.858 3.120 6.924e-03 0.191 -2.347 PTP4A3 protein tyrosine phosphatase type IVA, member 3 8 142501188 BC003105 8q24.3 Hs.43666 45

prenylated protein tyrosine phosphatase activity

early endosome

plasma membrane

protein amino acid dephosphorylation

hydrolase activity

identical protein binding

 
213868_s_at -0.602 4.712 -3.120 6.928e-03 0.191 -2.347 DHRS7 dehydrogenase/reductase (SDR family) member 7 14 -59681251 AW243128 14q23.1 Hs.59719 7

binding

oxidoreductase activity

oxidation reduction

 
200064_at -0.379 10.780 -3.119 6.944e-03 0.192 -2.350 HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 6 44322826 AF275719 6p12 Hs.509736 Hs.689683 Hs.701787 50

nucleotide binding

ATP binding

cytoplasm

protein folding

response to unfolded protein

nitric-oxide synthase regulator activity

TPR domain binding

negative regulation of proteasomal ubiquitin-dependent protein catabolic process

melanosome

positive regulation of nitric oxide biosynthetic process

unfolded protein binding

regulation of interferon-gamma-mediated signaling pathway

regulation of type I interferon-mediated signaling pathway

Antigen processing and presentation

Pathways in cancer

Prostate cancer

220944_at 0.347 5.810 3.118 6.956e-03 0.192 -2.351 PGLYRP4 peptidoglycan recognition protein 4 1 -151569220 NM_020393 1q21 Hs.58356 5

protein binding

intracellular

N-acetylmuramoyl-L-alanine amidase activity

peptidoglycan catabolic process

peptidoglycan receptor activity

membrane

detection of bacterium

innate immune response

defense response to Gram-positive bacterium

 
203315_at -0.410 8.167 -3.118 6.957e-03 0.192 -2.351 NCK2 NCK adaptor protein 2 2 105727785, 105834736 BC000103 2q12 Hs.529244 Hs.707062 34

protein binding

cytoplasm

endoplasmic reticulum

regulation of translation

actin filament organization

signal transduction

signal complex assembly

epidermal growth factor receptor signaling pathway

regulation of epidermal growth factor receptor activity

cytoskeletal adaptor activity

negative regulation of cell proliferation

vesicle membrane

cell migration

lamellipodium assembly

receptor signaling complex scaffold activity

positive regulation of actin filament polymerization

positive regulation of T cell proliferation

T cell activation

ErbB signaling pathway

Axon guidance

T cell receptor signaling pathway

Pathogenic Escherichia coli infection - EHEC

214975_s_at -0.527 3.866 -3.117 6.967e-03 0.192 -2.353 MTMR1 myotubularin related protein 1 X 149612526 AK001816 Xq28 Hs.347187 10

protein tyrosine phosphatase activity

cellular_component

plasma membrane

dephosphorylation

hydrolase activity

phosphatase activity

Fructose and mannose metabolism

Thiamine metabolism

Riboflavin metabolism

Metabolic pathways

1557073_s_at -0.540 5.441 -3.117 6.974e-03 0.192 -2.354 TTBK2 tau tubulin kinase 2 15 -40823835 AK074481 15q15.2 Hs.659846 Hs.713940 12

nucleotide binding

protein serine/threonine kinase activity

ATP binding

cell death

transferase activity

peptidyl-serine phosphorylation

 
223165_s_at -0.883 6.905 -3.116 6.992e-03 0.192 -2.356 IP6K2 inositol hexakisphosphate kinase 2 3 -48705886, -48700439 BC004469 3p21.31 Hs.595983 18

nucleotide binding

inositol or phosphatidylinositol kinase activity

ATP binding

nucleus

cytoskeleton

inositol trisphosphate 3-kinase activity

transferase activity

negative regulation of cell growth

positive regulation of apoptosis

phosphoinositide phosphorylation

 
201823_s_at -0.785 6.396 -3.115 6.997e-03 0.192 -2.357 RNF14 ring finger protein 14 5 141326620, 141328805, 141328916 NM_004290 5q23.3-q31.1 Hs.483616 19

transcription coactivator activity

transcription coactivator activity

protein binding

nucleus

cytoplasm

regulation of transcription from RNA polymerase II promoter

signal transduction

zinc ion binding

protein ubiquitination

ligase activity

small conjugating protein ligase activity

modification-dependent protein catabolic process

androgen receptor signaling pathway

response to estradiol stimulus

regulation of transcription

positive regulation of transcription, DNA-dependent

metal ion binding

androgen receptor binding

 
204856_at 0.328 5.748 3.115 7.000e-03 0.192 -2.357 B3GNT3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 19 17766918 NM_014256 19p13.1 Hs.657825 Hs.69009 13

Golgi apparatus

integral to plasma membrane

protein amino acid glycosylation

galactosyltransferase activity

membrane

transferase activity, transferring glycosyl groups

Glycosphingolipid biosynthesis - lacto and neolacto series

Metabolic pathways

218401_s_at -0.719 6.409 -3.114 7.015e-03 0.193 -2.359 ZNF281 zinc finger protein 281 1 -198642042 NM_012482 1q32.1 Hs.59757 5

negative regulation of transcription from RNA polymerase II promoter

DNA binding

specific RNA polymerase II transcription factor activity

intracellular

nucleus

DNA-directed RNA polymerase II, core complex

zinc ion binding

regulation of transcription

metal ion binding

 
233523_at 0.392 4.436 3.114 7.021e-03 0.193 -2.360 C20orf186 chromosome 20 open reading frame 186 20 31132978 AL121756 20q11.21 Hs.38961 4

extracellular region

cytoplasm

lipid binding

 
210458_s_at -0.953 4.705 -3.113 7.029e-03 0.193 -2.361 TANK TRAF family member-associated NFKB activator 2 161701711, 161701711 BC003388 2q24-q31 Hs.132257 22

protein binding

cytoplasm

signal transduction

zinc ion binding

metal ion binding

RIG-I-like receptor signaling pathway

1565389_s_at 0.282 5.042 3.113 7.030e-03 0.193 -2.361 GRM5 glutamate receptor, metabotropic 5 11 -87877392, -87877392 S64316 11q14.2-q14.3 Hs.147361 Hs.680431 Hs.719168 33

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

activation of phospholipase C activity by metabotropic glutamate receptor signaling pathway

synaptic transmission

glutamate receptor activity

Calcium signaling pathway

Neuroactive ligand-receptor interaction

Gap junction

Long-term potentiation

Long-term depression

Huntington's disease

221926_s_at 0.444 5.445 3.113 7.030e-03 0.193 -2.361 IL17RC interleukin 17 receptor C 3 9933763 BF196320 3p25.3 3p25.3-p24.1 Hs.129959 14

receptor activity

plasma membrane

integral to membrane

 
223289_s_at -1.230 7.232 -3.112 7.040e-03 0.193 -2.362 USP38 ubiquitin specific peptidase 38 4 144325519 AF211481   Hs.480848 7

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
35436_at -0.344 7.607 -3.112 7.040e-03 0.193 -2.362 GOLGA2 golgi autoantigen, golgin subfamily a, 2 9 -130057928 L06147 9q34.11 Hs.155827 45

protein binding

Golgi apparatus

membrane

 
52285_f_at -0.805 3.813 -3.112 7.043e-03 0.193 -2.363 CEP76 centrosomal protein 76kDa 18 -12662630 AW002970 18p11.21 Hs.236940 7

protein binding

centriole

regulation of centriole replication

 
203742_s_at -0.466 5.727 -3.111 7.060e-03 0.193 -2.365 TDG thymine-DNA glycosylase 12 102883722 BF674842 12q24.1 Hs.584809 47

damaged DNA binding

protein binding

nucleus

nucleoplasm

nucleoplasm

base-excision repair

mismatch repair

response to DNA damage stimulus

metabolic process

pyrimidine-specific mismatch base pair DNA N-glycosylase activity

DNA N-glycosylase activity

mismatched DNA binding

depyrimidination

Base excision repair

204537_s_at 0.346 4.456 3.110 7.070e-03 0.193 -2.366 GABRE gamma-aminobutyric acid (GABA) A receptor, epsilon X -150872251 NM_004961 Xq28 Hs.22785 17

GABA-A receptor activity

ion channel activity

extracellular ligand-gated ion channel activity

chloride channel activity

plasma membrane

integral to plasma membrane

ion transport

gamma-aminobutyric acid signaling pathway

cell junction

neurotransmitter receptor activity

chloride ion binding

chloride channel complex

synapse

postsynaptic membrane

Neuroactive ligand-receptor interaction

200862_at -1.169 7.125 -3.110 7.077e-03 0.193 -2.367 DHCR24 24-dehydrocholesterol reductase 1 -55087887 NM_014762 1p33-p31.1 Hs.498727 25

nucleus

endoplasmic reticulum

endoplasmic reticulum membrane

endoplasmic reticulum membrane

Golgi apparatus

cholesterol biosynthetic process

cholesterol biosynthetic process

apoptosis

anti-apoptosis

response to oxidative stress

cell cycle arrest

protein localization

tissue development

membrane

integral to membrane

membrane organization

oxidoreductase activity

enzyme binding

male genitalia development

plasminogen activation

peptide antigen binding

amyloid precursor protein catabolic process

negative regulation of caspase activity

neuroprotection

skin development

delta24-sterol reductase activity

FAD binding

oxidation reduction

Steroid biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

204813_at 0.521 5.818 3.109 7.084e-03 0.193 -2.368 MAPK10 mitogen-activated protein kinase 10 4 -87156655, -87156655, -87156655, -87156655 NM_002753 4q22.1-q23 Hs.125503 54

nucleotide binding

protein serine/threonine kinase activity

JUN kinase activity

MAP kinase activity

MAP kinase kinase activity

ATP binding

cytoplasm

protein amino acid phosphorylation

signal transduction

JNK cascade

transferase activity

MAPK signaling pathway

ErbB signaling pathway

Wnt signaling pathway

Focal adhesion

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

Fc epsilon RI signaling pathway

Neurotrophin signaling pathway

Insulin signaling pathway

GnRH signaling pathway

Adipocytokine signaling pathway

Type II diabetes mellitus

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Colorectal cancer

Pancreatic cancer

213421_x_at 0.359 5.154 3.109 7.088e-03 0.193 -2.368 PRSS3 protease, serine, 3 9 33740514, 33785558 AW007273 9p11.2 Hs.654513 22

serine-type endopeptidase activity

calcium ion binding

protein binding

extracellular region

extracellular space

proteolysis

proteolysis

digestion

peptidase activity

zymogen activation

endothelial cell migration

Neuroactive ligand-receptor interaction

201122_x_at -0.676 9.062 -3.109 7.092e-03 0.193 -2.369 EIF5A eukaryotic translation initiation factor 5A 17 7151041, 7151579, 7152011, 7152417 BC000751 17p13-p12 Hs.534314 52

RNA binding

translation initiation factor activity

translation elongation factor activity

nucleus

annulate lamellae

nuclear pore

cytoplasm

endoplasmic reticulum

cytosol

mRNA export from nucleus

translation

translational frameshifting

protein export from nucleus

nucleocytoplasmic transport

nucleocytoplasmic transport

induction of apoptosis

cell proliferation

peptidyl-lysine modification to hypusine

peptidyl-lysine modification to hypusine

protein transport

membrane

U6 snRNA binding

viral genome replication

ribosome binding

positive regulation of translational elongation

positive regulation of translational termination

positive regulation of translational initiation

protein N-terminus binding

intracellular protein transmembrane transport

 
226445_s_at -0.335 7.086 -3.108 7.098e-03 0.193 -2.370 TRIM41 tripartite motif-containing 41 5 180582911 AI743109 5q35.3 Hs.441488 9

protein binding

intracellular

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
230115_at -0.513 6.442 -3.108 7.101e-03 0.193 -2.370 DKFZp779M0652 hypothetical DKFZp779M0652 11 45749558 BE348376 11p11.2 Hs.632142 1    
224695_at -0.449 7.231 -3.108 7.102e-03 0.193 -2.370 C2orf29 chromosome 2 open reading frame 29 2 101235776 AK024221 2q11.2 Hs.715598 5

molecular_function

cellular_component

cell proliferation

 
203884_s_at -0.314 6.039 -3.108 7.106e-03 0.193 -2.371 RAB11FIP2 RAB11 family interacting protein 2 (class I) 10 -119754418 NM_014904 10q26.11 Hs.173656 20

protein binding

endosome

plasma membrane

protein transport

Endocytosis

1567458_s_at -0.894 7.595 -3.107 7.110e-03 0.193 -2.371 RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 7 6380650 AJ012502 7p22 Hs.413812 406

nucleotide binding

GTPase activity

GTP binding

intracellular

cytosol

plasma membrane

cell motion

inflammatory response

cell adhesion

small GTPase mediated signal transduction

anatomical structure morphogenesis

regulation of hydrogen peroxide metabolic process

positive regulation of lamellipodium assembly

enzyme binding

actin filament polymerization

GTP-dependent protein binding

ruffle organization

positive regulation of Rho protein signal transduction

melanosome

negative regulation of receptor-mediated endocytosis

localization within membrane

regulation of respiratory burst

MAPK signaling pathway

Chemokine signaling pathway

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Focal adhesion

Adherens junction

Toll-like receptor signaling pathway

Natural killer cell mediated cytotoxicity

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Amyotrophic lateral sclerosis (ALS)

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

205750_at 0.582 7.099 3.107 7.122e-03 0.193 -2.373 BPHL biphenyl hydrolase-like (serine hydrolase) 6 3063924 NM_004332 6p25 Hs.10136 12

mitochondrion

cellular amino acid and derivative metabolic process

response to toxin

hydrolase activity

 
227687_at -0.598 5.901 -3.106 7.131e-03 0.193 -2.374 HYLS1 hydrolethalus syndrome 1 11 125258718, 125262164 AL523264 11q24.2 Hs.585071 7

cytoplasm

 
228427_at 0.816 4.468 3.104 7.162e-03 0.194 -2.378 FBXO16 F-box protein 16 8 -28341847 BF196856 8p21.1 Hs.659190 5

modification-dependent protein catabolic process

 
218031_s_at -0.639 8.265 -3.102 7.184e-03 0.194 -2.381 FOXN3 forkhead box N3 14 -88692268, -88692268 NM_018589 14q31.3 Hs.434286 Hs.621371 16

DNA damage checkpoint

G2 phase of mitotic cell cycle

transcription factor activity

nucleus

cell cycle

protein C-terminus binding

transcription repressor activity

sequence-specific DNA binding

negative regulation of transcription, DNA-dependent

 
226500_at -0.310 8.750 -3.102 7.188e-03 0.194 -2.381 ZBTB47 zinc finger and BTB domain containing 47 3 42675877 AI806872 3p22.1 Hs.409561 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
207980_s_at -1.441 4.817 -3.101 7.197e-03 0.195 -2.382 CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 6 -139735089 NM_006079 6q23.3 Hs.82071 21

negative regulation of transcription from RNA polymerase II promoter

nuclear chromatin

response to hypoxia

liver development

transcription factor activity

transcription coactivator activity

transcription corepressor activity

protein binding

nucleus

anti-apoptosis

determination of left/right symmetry

heart development

heart development

positive regulation of specific transcription from RNA polymerase II promoter

positive regulation of cell-cell adhesion

negative regulation of cell migration

positive regulation of transforming growth factor beta receptor signaling pathway

response to fluid shear stress

positive regulation of cell cycle

positive regulation of transcription, DNA-dependent

 
230656_s_at -0.479 7.196 -3.101 7.202e-03 0.195 -2.383 CIRH1A cirrhosis, autosomal recessive 1A (cirhin) 16 67723999 AL578336 16q22.1 Hs.461113 13

molecular_function

nucleus

nucleolus

biological_process

 
202955_s_at -0.454 5.915 -3.099 7.236e-03 0.195 -2.387 ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) 8 -68272450 AF084520 8q13 Hs.656902 22

ARF guanyl-nucleotide exchange factor activity

binding

intracellular

exocytosis

ARF GTPase activator activity

myosin binding

regulation of ARF protein signal transduction

 
218501_at 0.520 6.685 3.099 7.238e-03 0.195 -2.387 ARHGEF3 Rho guanine nucleotide exchange factor (GEF) 3 3 -56736485, -56736485, -56736485 NM_019555 3p21-p13 Hs.476402 15

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

intracellular

cytoplasm

intracellular signaling cascade

regulation of Rho protein signal transduction

 
219452_at 0.320 4.806 3.098 7.243e-03 0.195 -2.388 DPEP2 dipeptidase 2 16 -66578795 NM_022355 16q22.1 Hs.372633 7

proteolysis

peptidase activity

metalloexopeptidase activity

dipeptidyl-peptidase activity

zinc ion binding

membrane

dipeptidase activity

anchored to membrane

metal ion binding

 
201674_s_at 0.543 10.078 3.098 7.248e-03 0.195 -2.389 AKAP1 A kinase (PRKA) anchor protein 1 17 52517551 BC000729 17q21-q23 Hs.463506 27

RNA binding

protein binding

cytoplasm

mitochondrion

mitochondrial outer membrane

membrane

integral to membrane

 
205079_s_at -0.449 7.872 -3.098 7.255e-03 0.195 -2.390 MPDZ multiple PDZ domain protein 9 -13095702 NM_003829 9p24-p22 Hs.169378 25

protein binding

plasma membrane

tight junction

postsynaptic density

synaptosome

cell junction

dendrite

cell projection

interspecies interaction between organisms

synapse

postsynaptic membrane

Tight junction

209206_at -0.468 7.696 -3.098 7.255e-03 0.195 -2.390 SEC22B SEC22 vesicle trafficking protein homolog B (S. cerevisiae) 1 143807763 AV701283 1q21.1 Hs.632438 Hs.715002 13

protein binding

endoplasmic reticulum

ER-Golgi intermediate compartment

Golgi apparatus

ER to Golgi vesicle-mediated transport

protein transport

membrane

integral to membrane

vesicle-mediated transport

melanosome

SNARE interactions in vesicular transport

212202_s_at -0.491 7.231 -3.097 7.258e-03 0.195 -2.390 TMEM87A transmembrane protein 87A 15 -40337427, -40290017 BG493972 15q15.1 Hs.511138 Hs.719196 6

membrane

integral to membrane

 
211769_x_at -0.738 7.546 -3.097 7.259e-03 0.195 -2.390 SERINC3 serine incorporator 3 20 -42561314, -42558277 BC006088 20q13.1-q13.3 Hs.272168 Hs.696043 10

protein binding

Golgi apparatus

plasma membrane

induction of apoptosis

integral to membrane

 
219299_at -0.517 6.364 -3.097 7.267e-03 0.195 -2.391 TRMT12 tRNA methyltransferase 12 homolog (S. cerevisiae) 8 125532228 NM_017956 8q24.13 Hs.9925 9

tRNA processing

methyltransferase activity

transferase activity

 
226582_at 0.545 5.377 3.096 7.276e-03 0.195 -2.392 LOC400043 hypothetical LOC400043 12 52806121 AL520272 12q13.13 Hs.19193 2    
202122_s_at -0.473 8.268 -3.095 7.287e-03 0.196 -2.394 PLIN3 perilipin 3 19 -4789345 NM_005817 19p13.3 Hs.140452 35

protein binding

cytoplasm

endosome

Golgi apparatus

lipid particle

membrane

vesicle-mediated transport

 
214948_s_at -0.544 6.648 -3.095 7.291e-03 0.196 -2.394 TMF1 TATA element modulatory factor 1 3 -69151667 AL050136 3p21-p12 Hs.267632 15

Golgi membrane

DNA binding

RNA polymerase II transcription factor activity

transcription cofactor activity

protein binding

nucleus

cytoplasm

Golgi apparatus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

membrane

 
1554334_a_at -1.102 8.170 -3.095 7.293e-03 0.196 -2.394 DNAJA4 DnaJ (Hsp40) homolog, subfamily A, member 4 15 76343541, 76344043, 76345614 BC031044 15q25.1 Hs.513053 5

protein folding

zinc ion binding

membrane

heat shock protein binding

metal ion binding

unfolded protein binding

 
243508_at -0.376 4.338 -3.095 7.295e-03 0.196 -2.394 C20orf196 chromosome 20 open reading frame 196 20 5679042 AV715251 20p12.3 Hs.529340 1    
211950_at -0.391 8.097 -3.094 7.306e-03 0.196 -2.396 UBR4 ubiquitin protein ligase E3 component n-recognin 4 1 -19273586 AB007931 1p36.13 Hs.148078 Hs.649405 11

ubiquitin-protein ligase activity

calmodulin binding

nucleus

cytoplasm

cytoskeleton

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

interspecies interaction between organisms

metal ion binding

 
200928_s_at -0.334 3.394 -3.094 7.315e-03 0.196 -2.397 RAB14 RAB14, member RAS oncogene family 9 -122980236 AL162081 9q32-q34.11 Hs.371563 Hs.713585 19

nucleotide binding

GTPase activity

protein binding

GTP binding

intracellular

membrane fraction

lysosome

early endosome

late endosome

rough endoplasmic reticulum

Golgi stack

cytosol

plasma membrane

Golgi to endosome transport

small GTPase mediated signal transduction

neurotransmitter secretion

protein transport

vesicle-mediated transport

trans-Golgi network transport vesicle

nuclear envelope-endoplasmic reticulum network

intracellular transport

perinuclear region of cytoplasm

 
219069_at -0.629 6.249 -3.093 7.327e-03 0.196 -2.398 ANKRD49 ankyrin repeat domain 49 11 93866800 NM_017704 11q21 Hs.29052 5    
207615_s_at 0.329 4.221 3.093 7.331e-03 0.196 -2.399 C16orf3 chromosome 16 open reading frame 3 16 -88622816 NM_001214 16q24.3 Hs.633032 3

molecular_function

cellular_component

biological_process

 
226750_at -0.683 6.597 -3.092 7.333e-03 0.196 -2.399 LARP1B La ribonucleoprotein domain family, member 1B 4 129201952, 129201952, 129201952 AI767732 4q28.2 Hs.657067 3

RNA binding

 
210330_at -0.553 4.597 -3.092 7.337e-03 0.196 -2.400 SGCD sarcoglycan, delta (35kDa dystrophin-associated glycoprotein) 5 155686344, 155686344 U58331 5q33-q34 Hs.387207 Hs.644733 29

protein binding

cytoplasm

cytoskeleton

plasma membrane

cytoskeleton organization

muscle organ development

sarcoglycan complex

integral to membrane

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

234876_at 0.339 5.107 3.092 7.341e-03 0.196 -2.400 COX6A1 cytochrome c oxidase subunit VIa polypeptide 1 12 119360286 U82486 12q24.2 Hs.497118 11

cytochrome-c oxidase activity

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex IV

generation of precursor metabolites and energy

membrane

Oxidative phosphorylation

Metabolic pathways

Cardiac muscle contraction

Alzheimer's disease

Parkinson's disease

Huntington's disease

215509_s_at 0.292 3.692 3.090 7.372e-03 0.197 -2.404 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 2 -111111882 AL137654 2q14 Hs.469649 55

nucleotide binding

condensed chromosome kinetochore

condensed nuclear chromosome, centromeric region

protein serine/threonine kinase activity

ATP binding

nucleus

spindle pole body

protein amino acid phosphorylation

cell cycle

mitosis

mitotic cell cycle spindle assembly checkpoint

cell proliferation

transferase activity

cell division

Cell cycle

204844_at 0.790 5.317 3.090 7.373e-03 0.197 -2.404 ENPEP glutamyl aminopeptidase (aminopeptidase A) 4 111616677 L12468 4q25 Hs.435765 25

angiogenesis

aminopeptidase activity

calcium ion binding

plasma membrane

integral to plasma membrane

brush border

proteolysis

cell-cell signaling

peptidase activity

metalloexopeptidase activity

zinc ion binding

cell proliferation

external side of plasma membrane

apical plasma membrane

cell migration

cytoplasmic vesicle

Renin-angiotensin system

205369_x_at -0.536 4.935 -3.089 7.378e-03 0.197 -2.405 DBT dihydrolipoamide branched chain transacylase E2 1 -100425065 J03208 1p31 Hs.709187 34

protein binding

mitochondrion

mitochondrial alpha-ketoglutarate dehydrogenase complex

metabolic process

acyltransferase activity

transferase activity

lipoic acid binding

mitochondrial nucleoid

dihydrolipoyllysine-residue (2-methylpropanoyl)transferase activity

acyl-CoA biosynthetic process

cofactor binding

Valine, leucine and isoleucine degradation

Metabolic pathways

229177_at 0.387 5.551 3.089 7.390e-03 0.197 -2.406 C16orf89 chromosome 16 open reading frame 89 16 -5034123 AI823572 16p13.3 Hs.11782 4

extracellular region

 
217730_at -0.491 8.118 -3.088 7.395e-03 0.197 -2.407 TMBIM1 transmembrane BAX inhibitor motif containing 1 2 -218847160 NM_022152 2p24.3-p24.1 Hs.591605 9

membrane

integral to membrane

 
212350_at -0.912 7.557 -3.088 7.399e-03 0.197 -2.407 TBC1D1 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 4 37569114 AB029031 4p14 Hs.176503 15

GTPase activator activity

Rab GTPase activator activity

intracellular

nucleus

regulation of Rab GTPase activity

 
220028_at 0.394 5.958 3.088 7.404e-03 0.197 -2.408 ACVR2B activin A receptor, type IIB 3 38470793 NM_001106 3p22 Hs.174273 38

nucleotide binding

magnesium ion binding

receptor activity

ATP binding

cytoplasm

plasma membrane

integral to plasma membrane

protein amino acid phosphorylation

signal transduction

anterior/posterior pattern formation

cell surface

activin receptor activity, type II

transferase activity

growth factor binding

manganese ion binding

positive regulation of bone mineralization

BMP signaling pathway

BMP signaling pathway

positive regulation of activin receptor signaling pathway

regulation of transcription

positive regulation of osteoblast differentiation

Cytokine-cytokine receptor interaction

TGF-beta signaling pathway

222653_at -0.406 6.777 -3.087 7.408e-03 0.197 -2.409 PNPO pyridoxamine 5'-phosphate oxidase 17 43373887 AA005137 17q21.32 Hs.631742 13

pyridoxamine-phosphate oxidase activity

pyridoxine biosynthetic process

FMN binding

oxidoreductase activity, acting on the CH-NH2 group of donors

oxidation reduction

Vitamin B6 metabolism

Metabolic pathways

1561687_a_at 0.526 2.935 3.087 7.409e-03 0.197 -2.409 ZNF382 zinc finger protein 382 19 41788060 BC038358 19q13.12 Hs.631591 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
205603_s_at -1.069 6.759 -3.087 7.421e-03 0.197 -2.410 DIAPH2 diaphanous homolog 2 (Drosophila) X 95826317, 95826317 NM_007309 Xq21.33 Hs.226483 Hs.716101 14

cytokinesis

actin binding

receptor binding

cytoplasm

early endosome

Golgi apparatus

cytosol

multicellular organismal development

cellular component organization

Rho GTPase binding

actin cytoskeleton organization

cell differentiation

oogenesis

Regulation of actin cytoskeleton

212018_s_at -0.618 8.731 -3.086 7.435e-03 0.197 -2.412 RSL1D1 ribosomal L1 domain containing 1 16 -11835555 AK000822 16p13.13 Hs.401842 17

RNA binding

structural constituent of ribosome

protein binding

intracellular

nucleus

nucleolus

ribosome

RNA processing

translation

regulation of protein localization

 
232175_at 0.356 6.270 3.085 7.445e-03 0.198 -2.413 ARF1 ADP-ribosylation factor 1 1 226336983, 226337473 AI972094 1q42 Hs.286221 97

Golgi membrane

nucleotide binding

GTPase activity

receptor signaling protein activity

protein binding

GTP binding

intracellular

Golgi apparatus

cytosol

cytosol

plasma membrane

retrograde vesicle-mediated transport, Golgi to ER

small GTPase mediated signal transduction

protein transport

membrane organization

vesicle-mediated transport

sarcomere

COPI coating of Golgi vesicle

Vibrio cholerae infection

209286_at -1.139 6.516 -3.084 7.453e-03 0.198 -2.414 CDC42EP3 CDC42 effector protein (Rho GTPase binding) 3 2 -37724246 AI754416 2p21 Hs.369574 17

protein binding

cytoskeletal regulatory protein binding

cytoplasm

signal transduction

regulation of cell shape

actin cytoskeleton

membrane

 
225381_at 0.761 5.988 3.083 7.480e-03 0.198 -2.417 LOC399959 hypothetical LOC399959 11 -121465022 AW162210 11q24.1 Hs.44098 2    
1554464_a_at -0.881 5.317 -3.083 7.481e-03 0.198 -2.417 CRTAP cartilage associated protein 3 33130453 BC008745 3p22.3 Hs.719160 10

extracellular region

proteinaceous extracellular matrix

 
219016_at -0.381 7.179 -3.083 7.481e-03 0.198 -2.417 FASTKD5 FAST kinase domains 5 20 -3075164 NM_021826 20p13 Hs.654646 4

protein kinase activity

ATP binding

apoptosis

 
229500_at -0.564 4.475 -3.083 7.483e-03 0.198 -2.418 SLC30A9 solute carrier family 30 (zinc transporter), member 9 4 41687279 AI609256 4p13-p12 Hs.479634 6

nucleotide binding

transcription factor activity

nucleus

cytoskeleton

cation transport

zinc ion transport

biological_process

zinc ion binding

cation transmembrane transporter activity

membrane

integral to membrane

regulation of transcription

 
212004_at -0.285 7.617 -3.081 7.501e-03 0.198 -2.420 C1orf144 chromosome 1 open reading frame 144 1 16566169 AL050028 1p36.13 Hs.252967 2    
212397_at -0.521 9.676 -3.081 7.504e-03 0.198 -2.420 RDX radixin 11 -109605375 AL137751 11q23 Hs.263671 Hs.592679 46

ruffle

actin binding

cytoplasm

cytoskeleton

plasma membrane

extrinsic to membrane

lamellipodium

microvillus assembly

filopodium

stereocilium

apical protein localization

apical part of cell

actin filament capping

Regulation of actin cytoskeleton

228601_at 0.411 4.627 3.081 7.505e-03 0.198 -2.420 LOC401022 hypothetical LOC401022 2   AW340112 2q31.2 Hs.98661 1    
38269_at 0.309 6.172 3.081 7.506e-03 0.198 -2.420 PRKD2 protein kinase D2 19 -51869412, -51869412 AL050147 19q13.3 Hs.466987 25

nucleotide binding

protein kinase C activity

ATP binding

intracellular

protein amino acid phosphorylation

intracellular signaling cascade

zinc ion binding

transferase activity

diacylglycerol binding

metal ion binding

 
233587_s_at 0.730 5.782 3.081 7.509e-03 0.198 -2.421 SIPA1L2 signal-induced proliferation-associated 1 like 2 1 -230600334 AK022852 1q42.2 Hs.715656 8

GTPase activator activity

protein binding

intracellular

regulation of small GTPase mediated signal transduction

 
221472_at -0.359 8.414 -3.079 7.534e-03 0.199 -2.424 SERINC3 serine incorporator 3 20 -42561314, -42558277 Z97053 20q13.1-q13.3 Hs.272168 Hs.696043 10

protein binding

Golgi apparatus

plasma membrane

induction of apoptosis

integral to membrane

 
222885_at 0.441 8.351 3.079 7.539e-03 0.199 -2.424 EMCN endomucin 4 -101535522 AF205940 4q24 Hs.152913 12

extracellular region

plasma membrane

integral to membrane

 
219959_at 1.237 5.116 3.079 7.542e-03 0.199 -2.425 MOCOS molybdenum cofactor sulfurase 18 32021477 NM_017947 18q12 Hs.405028 10

cellular_component

Mo-molybdopterin cofactor biosynthetic process

metabolic process

Mo-molybdopterin cofactor sulfurase activity

lyase activity

molybdenum ion binding

pyridoxal phosphate binding

molybdopterin cofactor metabolic process

 
215119_at 1.372 5.238 3.078 7.550e-03 0.199 -2.426 MYO16 myosin XVI 13 108046500 AI522028 13q33.3 Hs.656587 7

nucleotide binding

motor activity

ATP binding

nucleoplasm

cytoplasm

plasma membrane

negative regulation of cell proliferation

myosin complex

cerebellum development

negative regulation of S phase of mitotic cell cycle

perinuclear region of cytoplasm

actin filament binding

 
208042_at -0.478 4.909 -3.078 7.558e-03 0.199 -2.427 AGGF1 angiogenic factor with G patch and FHA domains 1 5 76361987 NM_013303 5q13.3 Hs.634849 12

vasculogenesis

positive regulation of endothelial cell proliferation

nucleic acid binding

protein binding

extracellular region

intracellular

cytoplasm

RNA processing

cell adhesion

multicellular organismal development

eukaryotic cell surface binding

positive regulation of angiogenesis

perinuclear region of cytoplasm

 
203581_at -0.433 8.186 -3.077 7.566e-03 0.199 -2.428 RAB4A RAB4A, member RAS oncogene family 1 227473501 BC002438 1q42-q43 Hs.296169 43

nucleotide binding

GTPase activity

GTP binding

cytoplasm

small GTPase mediated signal transduction

protein transport

membrane

Endocytosis

210672_s_at -0.376 6.099 -3.077 7.574e-03 0.199 -2.429 C16orf35 chromosome 16 open reading frame 35 16 -75803, -75803 BC004185 16p13.3 Hs.19699 6

molecular_function

cellular_component

biological_process

 
215910_s_at 0.309 3.823 3.075 7.591e-03 0.199 -2.431 FNDC3A fibronectin type III domain containing 3A 13 48448048, 48582449 AL137000 13q14.2 Hs.508010 10

acrosomal vesicle

Golgi apparatus

cytosol

spermatid development

fertilization

vesicle membrane

cell-cell adhesion

cytoplasmic vesicle

vesicular fraction

Sertoli cell development

 
201723_s_at -0.610 8.049 -3.075 7.592e-03 0.199 -2.431 GALNT1 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) 18 31488530 U41514 18q12.1 Hs.514806 26

polypeptide N-acetylgalactosaminyltransferase activity

calcium ion binding

sugar binding

extracellular region

Golgi apparatus

membrane

integral to membrane

transferase activity, transferring glycosyl groups

protein amino acid O-linked glycosylation via serine

protein amino acid O-linked glycosylation via threonine

manganese ion binding

perinuclear region of cytoplasm

O-Glycan biosynthesis

Metabolic pathways

223654_s_at 0.297 4.903 3.075 7.593e-03 0.199 -2.431 BRUNOL4 bruno-like 4, RNA binding protein (Drosophila) 18 -33077005 BC004167 18q12 Hs.435976 Hs.600908 12

nucleotide binding

regulation of alternative nuclear mRNA splicing, via spliceosome

translation repressor activity, nucleic acid binding

nucleus

cytoplasm

germ cell development

embryonic development

BRE binding

 
201647_s_at -0.627 5.963 -3.075 7.597e-03 0.199 -2.431 SCARB2 scavenger receptor class B, member 2 4 -77298917 NM_005506 4q21.1 Hs.349656 Hs.714206 24

receptor activity

protein binding

membrane fraction

lysosome

integral to plasma membrane

cell adhesion

membrane

Lysosome

200711_s_at -0.535 9.463 -3.075 7.598e-03 0.199 -2.432 SKP1 S-phase kinase-associated protein 1 5 -133519980 NM_003197 5q31 Hs.171626 Hs.710433 63

protein binding

nucleoplasm

cytosol

ubiquitin-dependent protein catabolic process

SCF ubiquitin ligase complex

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

Wnt signaling pathway

TGF-beta signaling pathway

201371_s_at -0.533 9.427 -3.074 7.615e-03 0.199 -2.434 CUL3 cullin 3 2 -225043112 AF062537 2q36.2 Hs.372286 39

G1/S transition of mitotic cell cycle

protein binding

nucleus

Golgi apparatus

ubiquitin-dependent protein catabolic process

cell cycle arrest

cyclin catabolic process

positive regulation of cell proliferation

induction of apoptosis by intracellular signals

cullin-RING ubiquitin ligase complex

ubiquitin protein ligase binding

Ubiquitin mediated proteolysis

234000_s_at 0.433 6.614 3.074 7.619e-03 0.199 -2.434 PTPLAD1 protein tyrosine phosphatase-like A domain containing 1 15 63609879 AJ271091 15q22.2 Hs.512973 13

molecular_function

GTPase activator activity

protein binding

cellular_component

I-kappaB kinase/NF-kappaB cascade

activation of JUN kinase activity

small GTPase mediated signal transduction

Rho protein signal transduction

membrane

integral to membrane

Rac protein signal transduction

 
200627_at -0.653 10.402 -3.073 7.635e-03 0.199 -2.436 PTGES3 prostaglandin E synthase 3 (cytosolic) 12 -55343391 BC003005 12 12q13.3 Hs.50425 36

telomere maintenance

chromosome, telomeric region

prostaglandin biosynthetic process

telomerase activity

telomerase holoenzyme complex

cytoplasm

fatty acid biosynthetic process

signal transduction

isomerase activity

prostaglandin-E synthase activity

unfolded protein binding

 
240809_at 0.398 5.045 3.073 7.635e-03 0.199 -2.436 C21orf121 chromosome 21 open reading frame 121 21 42315181 AI138282 21q22.3 Hs.143833 3    
229820_at 0.597 5.322 3.072 7.649e-03 0.200 -2.438 LOC440993 hypothetical LOC440993 3   BF509179 3q29 Hs.709411      
203349_s_at -0.842 5.794 -3.072 7.652e-03 0.200 -2.438 ETV5 ets variant 5 3 -187246799 NM_004454 3q28 Hs.43697 21

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

sequence-specific DNA binding

 
209799_at -0.577 3.757 -3.072 7.654e-03 0.200 -2.438 PRKAA1 protein kinase, AMP-activated, alpha 1 catalytic subunit 5 -40795237 AF100763 5p12 Hs.43322 68

nucleotide binding

activation of MAPK activity

magnesium ion binding

response to hypoxia

protein serine/threonine kinase activity

cAMP-dependent protein kinase activity

protein binding

ATP binding

intracellular

glucose metabolic process

fatty acid biosynthetic process

signal transduction

transferase activity

fatty acid oxidation

positive regulation of cholesterol biosynthetic process

positive regulation of anti-apoptosis

negative regulation of glucosylceramide biosynthetic process

Regulation of autophagy

mTOR signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

Hypertrophic cardiomyopathy (HCM)

209487_at 0.442 6.152 3.070 7.684e-03 0.200 -2.442 RBPMS RNA binding protein with multiple splicing 8 30361485, 30361485 D84109 8p12-p11 Hs.334587 8

nucleotide binding

RNA binding

protein binding

RNA processing

 
1554287_at -0.553 4.870 -3.069 7.686e-03 0.200 -2.442 TRIM4 tripartite motif-containing 4 7 -99325971 BC011763 7q22-q31.1 Hs.50749 8

protein binding

intracellular

cytoplasm

zinc ion binding

metal ion binding

protein trimerization

 
205836_s_at -0.712 5.254 -3.069 7.691e-03 0.200 -2.443 YTHDC2 YTH domain containing 2 5 112877308 NM_022828 5q22.2 Hs.231942 6

nucleotide binding

nucleic acid binding

helicase activity

ATP binding

hydrolase activity

 
238177_at 0.317 5.248 3.069 7.696e-03 0.200 -2.443 SLC6A19 solute carrier family 6 (neutral amino acid transporter), member 19 5 1254709 AA873542 5p15.33 Hs.481478 10

neurotransmitter:sodium symporter activity

integral to plasma membrane

neurotransmitter transport

neutral amino acid transmembrane transporter activity

symporter activity

neutral amino acid transport

membrane

 
223012_at -0.639 8.695 -3.068 7.707e-03 0.200 -2.445 UBXN6 UBX domain protein 6 19 -4396260 AF272894 19p13 Hs.435255 Hs.661664 6

molecular_function

protein binding

cellular_component

nucleus

cytoplasm

centrosome

biological_process

modification-dependent protein catabolic process

 
206001_at 0.308 4.812 3.067 7.724e-03 0.201 -2.446 NPY neuropeptide Y 7 24290333 NM_000905 7p15.1 Hs.1832 144

G-protein-coupled receptor binding

G-protein coupled receptor activity

neuropeptide hormone activity

calcium channel regulator activity

extracellular region

extracellular space

cell

calcium ion transport

cell motion

G-protein signaling, coupled to cyclic nucleotide second messenger

neuropeptide signaling pathway

synaptic transmission

digestion

regulation of blood pressure

cell proliferation

adult feeding behavior

positive regulation of appetite

Adipocytokine signaling pathway

236321_at 0.514 5.266 3.067 7.729e-03 0.201 -2.447 LOC285550 hypothetical protein LOC285550 4 15292449 AW439843 4p15.32 Hs.399980 Hs.619367 3    
208946_s_at -0.570 8.279 -3.066 7.746e-03 0.201 -2.449 BECN1 beclin 1, autophagy related 17 -38215675 AF139131 17q21 Hs.716464 56

protein binding

cytoplasm

Golgi apparatus

trans-Golgi network

autophagy

anti-apoptosis

cellular defense response

negative regulation of cell proliferation

response to virus

membrane

cytoplasmic membrane-bounded vesicle

positive regulation of macroautophagy

protein complex

Regulation of autophagy

208718_at -0.307 10.589 -3.065 7.757e-03 0.201 -2.450 DDX17 DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 22 -37209388, -37209388 Z97056 22q13.1 Hs.528305 Hs.665429 Hs.719084 28

nucleotide binding

RNA binding

RNA helicase activity

ATP binding

nucleus

RNA processing

ATP-dependent helicase activity

RNA-dependent ATPase activity

hydrolase activity

 
201241_at -0.534 9.959 -3.064 7.775e-03 0.201 -2.453 DDX1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 2 15649220 NM_004939 2p24 Hs.440599 24

nucleotide binding

spliceosome assembly

RNA binding

RNA helicase activity

protein binding

ATP binding

cellular_component

regulation of translational initiation

multicellular organismal development

ATP-dependent helicase activity

hydrolase activity

ribonucleoprotein complex

 
1554774_at -0.575 4.865 -3.064 7.780e-03 0.202 -2.453 MINA MYC induced nuclear antigen 3 -99143350, -99143350 AB083191 3q11.2 Hs.607776 15

nucleus

nucleolus

cytoplasm

ribosome biogenesis

 
224718_at -0.448 6.823 -3.063 7.787e-03 0.202 -2.454 YY1 YY1 transcription factor 14 99774854 AK025731 14q Hs.388927 97

transcription factor activity

transcription coactivator activity

transcription corepressor activity

protein binding

intracellular

nucleus

transcription factor complex

plasma membrane

regulation of transcription from RNA polymerase II promoter

zinc ion binding

anterior/posterior pattern formation

nuclear matrix

PcG protein complex

metal ion binding

camera-type eye morphogenesis

 
228316_at 0.510 4.186 3.063 7.788e-03 0.202 -2.454 C2orf63 chromosome 2 open reading frame 63 2 -55253187, -55253187 AA905470 2p16.1 Hs.347014 4

binding

 
223253_at -0.554 9.630 -3.062 7.803e-03 0.202 -2.456 EPDR1 ependymin related protein 1 (zebrafish) 7 37926687 BC000686 7p14.1 Hs.563491 7

calcium ion binding

extracellular region

lysosome

cell-matrix adhesion

 
220611_at 0.333 4.182 3.060 7.829e-03 0.202 -2.459 DAB1 disabled homolog 1 (Drosophila) 1 -57236166 NM_021080 1p32-p31 Hs.477370 37

multicellular organismal development

nervous system development

cell differentiation

 
221272_s_at -0.920 7.422 -3.060 7.832e-03 0.202 -2.459 C1orf21 chromosome 1 open reading frame 21 1 182622772 NM_030806 1q25 Hs.497159 Hs.719188 8    
217542_at -0.380 4.898 -3.060 7.839e-03 0.202 -2.460 MDM2 Mdm2 p53 binding protein homolog (mouse) 12 67488237, 67489063 BE930512 12q14.3-q15 Hs.484551 555

negative regulation of transcription from RNA polymerase II promoter

negative regulation of transcription from RNA polymerase II promoter

p53 binding

ubiquitin-protein ligase activity

intracellular

insoluble fraction

nucleus

nucleoplasm

nucleoplasm

nucleolus

cytoplasm

cytosol

protein complex assembly

zinc ion binding

positive regulation of cell proliferation

ligase activity

basal transcription repressor activity

basal transcription repressor activity

enzyme binding

modification-dependent protein catabolic process

positive regulation of proteasomal ubiquitin-dependent protein catabolic process

regulation of protein catabolic process

protein ubiquitination during ubiquitin-dependent protein catabolic process

identical protein binding

interspecies interaction between organisms

metal ion binding

Cell cycle

p53 signaling pathway

Ubiquitin mediated proteolysis

Endocytosis

Pathways in cancer

Glioma

Prostate cancer

Melanoma

Bladder cancer

Chronic myeloid leukemia

212185_x_at -0.852 10.784 -3.060 7.841e-03 0.202 -2.460 MT2A metallothionein 2A 16 55199978 NM_005953 16q13 Hs.647371 53

protein binding

cellular copper ion homeostasis

zinc ion binding

metal ion binding

 
211665_s_at -1.006 5.476 -3.060 7.844e-03 0.202 -2.461 SOS2 son of sevenless homolog 2 (Drosophila) 14 -49653595 L20686 14q21 Hs.291533 20

DNA binding

Rho guanyl-nucleotide exchange factor activity

protein binding

cellular_component

intracellular

regulation of Rho protein signal transduction

regulation of small GTPase mediated signal transduction

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

Dorso-ventral axis formation

Focal adhesion

Gap junction

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Insulin signaling pathway

GnRH signaling pathway

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Endometrial cancer

Glioma

Prostate cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Non-small cell lung cancer

227666_at 0.285 4.735 3.059 7.850e-03 0.202 -2.461 DCLK2 doublecortin-like kinase 2 4 151219529 AI523594 4q31.23-q31.3 Hs.591683 4

nucleotide binding

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

intracellular signaling cascade

transferase activity

 
40687_at 0.398 6.474 3.059 7.859e-03 0.202 -2.462 GJA4 gap junction protein, alpha 4, 37kDa 1 35031185 M96789 1p35.1 Hs.296310 47

blood vessel development

plasma membrane

integral to plasma membrane

connexon complex

transport

cell-cell junction assembly

cell communication

cell junction

 
202814_s_at -0.741 7.357 -3.058 7.866e-03 0.202 -2.463 HEXIM1 hexamethylene bis-acetamide inducible 1 17 40580466 AW193511 17q21.31 Hs.586945 Hs.634944 Hs.716487 28

negative regulation of transcription from RNA polymerase II promoter

cyclin-dependent protein kinase inhibitor activity

protein binding

nucleus

cytoplasm

heart development

specific transcriptional repressor activity

snRNA binding

regulation of transcription

negative regulation of cyclin-dependent protein kinase activity

 
243439_at 0.525 5.722 3.057 7.882e-03 0.203 -2.465 ZNF418 zinc finger protein 418 19 -63125063 AI971569 19q13.43 Hs.660728 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1553757_at 0.377 5.085 3.056 7.908e-03 0.203 -2.468 IQCG IQ motif containing G 3 -199100344, -199100343 NM_032263 3q29 Hs.591675 6    
229809_at -0.508 5.722 -3.053 7.943e-03 0.204 -2.472 POU6F1 POU class 6 homeobox 1 12 -49866986, -49866986 AW445212 12q13.13 Hs.555886 10

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

brain development

heart development

muscle organ development

sequence-specific DNA binding

 
209533_s_at -0.522 7.344 -3.053 7.955e-03 0.204 -2.473 PLAA phospholipase A2-activating protein 9 -26893368 AF145020 9p21 Hs.27182 15

protein binding

phospholipid metabolic process

inflammatory response

signal transduction

phospholipase A2 activator activity

 
225978_at -0.834 5.474 -3.053 7.955e-03 0.204 -2.473 RIMKLB ribosomal modification protein rimK-like family member B 12 8741784 AW409794 12p13.31 Hs.504670 4

nucleotide binding

catalytic activity

ATP binding

protein modification process

manganese ion binding

metal ion binding

 
215932_at 0.332 3.175 3.052 7.959e-03 0.204 -2.474 MAGEC2 melanoma antigen family C, 2 X -141117795 AL031073 Xq27 Hs.123536 14

nucleus

cytoplasm

 
203235_at 0.297 6.272 3.051 7.977e-03 0.204 -2.476 THOP1 thimet oligopeptidase 1 19 2736505 NM_003249 19q13.3 Hs.78769 24

metalloendopeptidase activity

protein binding

cytoplasm

proteolysis

peptide metabolic process

protein kinase cascade

peptidase activity

zinc ion binding

metal ion binding

Renin-angiotensin system

212429_s_at -0.411 7.412 -3.051 7.980e-03 0.204 -2.476 GTF3C2 general transcription factor IIIC, polypeptide 2, beta 110kDa 2 -27402224 AW194657 2p23.3 Hs.75782 18

transcription factor TFIIIC complex

DNA binding

RNA polymerase III transcription factor activity

protein binding

nucleus

mitochondrion

peroxisome

transcription, DNA-dependent

oxygen and reactive oxygen species metabolic process

5S class rRNA transcription

tRNA transcription from RNA polymerase III promoter

 
225203_at 0.761 8.671 3.050 8.000e-03 0.205 -2.478 PPP1R16A protein phosphatase 1, regulatory (inhibitor) subunit 16A 8 145692916 AI742931 8q24.3 Hs.521937 9

protein binding

plasma membrane

 
204458_at -0.466 5.720 -3.049 8.008e-03 0.205 -2.479 PLA2G15 phospholipase A2, group XV 16 66836747 AL110209 16q22.1 Hs.632199 17

phosphatidylcholine-sterol O-acyltransferase activity

lysophospholipase activity

phospholipid binding

extracellular region

soluble fraction

lysosome

lipid metabolic process

ceramide metabolic process

acyltransferase activity

fatty acid catabolic process

transferase activity

hydrolase activity

calcium-independent phospholipase A2 activity

Glycerophospholipid metabolism

Lysosome

216320_x_at 0.351 6.099 3.049 8.017e-03 0.205 -2.480 MST1 macrophage stimulating 1 (hepatocyte growth factor-like) 3 -49696384 U37055 3p21 Hs.349110 Hs.512587 31

catalytic activity

serine-type endopeptidase activity

calcium ion binding

extracellular region

proteolysis

blood coagulation

biological_process

 
226466_s_at -0.440 7.202 -3.048 8.032e-03 0.205 -2.482 FAM58A family with sequence similarity 58, member A X -152506576 AL544688 Xq28 Hs.496943 Hs.659433 6    
202353_s_at -0.477 9.140 -3.047 8.041e-03 0.205 -2.483 PSMD12 proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 17 -62767081, -62767080 NM_002816 17q24.2 Hs.646575 39

protein binding

cytosol

proteasome regulatory particle

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

207087_x_at 0.486 11.167 3.046 8.058e-03 0.206 -2.485 ANK1 ankyrin 1, erythrocytic 8 -41629901, -41629901, -41629900 NM_020478 8p11.1 Hs.654438 Hs.667377 49

structural constituent of cytoskeleton

cytoplasm

plasma membrane

exocytosis

cytoskeleton organization

signal transduction

cytoskeletal adaptor activity

spectrin-associated cytoskeleton

basolateral plasma membrane

sarcoplasmic reticulum

enzyme binding

spectrin binding

M band

maintenance of epithelial cell apical/basal polarity

 
212966_at 0.598 3.806 3.046 8.059e-03 0.206 -2.485 HIC2 hypermethylated in cancer 2 22 20101692 AL043112 22q11.21 Hs.632767 12

DNA binding

intracellular

nucleus

protein C-terminus binding

zinc ion binding

regulation of transcription

negative regulation of transcription, DNA-dependent

metal ion binding

 
224777_s_at -0.331 7.755 -3.046 8.069e-03 0.206 -2.486 PAFAH1B2 platelet-activating factor acetylhydrolase, isoform Ib, subunit 2 (30kDa) 11 116520249 BG386322 11q23 Hs.718419 15

1-alkyl-2-acetylglycerophosphocholine esterase activity

protein binding

cytoplasm

spermatogenesis

lipid catabolic process

hydrolase activity, acting on ester bonds

Ether lipid metabolism

Metabolic pathways

242146_at 0.514 5.300 3.045 8.073e-03 0.206 -2.487 SNRPA1 small nuclear ribonucleoprotein polypeptide A' 15 -99639237 AA872471 15q26.3 Hs.528763 22

nuclear mRNA splicing, via spliceosome

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

spliceosomal complex

U2 snRNP

RNA splicing

 
1566147_a_at 0.405 5.322 3.045 8.073e-03 0.206 -2.487 LOC375010 ankyrin repeat domain 20 family, member A pseudogene 1   AK098337 1q21.1 Hs.672092 1    
221503_s_at -0.973 9.038 -3.044 8.100e-03 0.206 -2.490 KPNA3 karyopherin alpha 3 (importin alpha 4) 13 -49171444 AF034756 13q14.3 Hs.527919 61

protein binding

nucleus

nuclear pore

cytoplasm

protein complex assembly

NLS-bearing substrate import into nucleus

intracellular protein transport

nuclear localization sequence binding

protein transporter activity

 
225674_at -0.653 8.510 -3.044 8.101e-03 0.206 -2.490 BCAP29 B-cell receptor-associated protein 29 7 107007657, 107008439 AW873330 7q22-q31 Hs.303787 12

endoplasmic reticulum

intracellular protein transport

apoptosis

membrane

integral to membrane

vesicle-mediated transport

 
212843_at -0.830 5.000 -3.043 8.108e-03 0.206 -2.491 NCAM1 neural cell adhesion molecule 1 11 112337204, 112337204 AA126505 11q23.1 Hs.503878 120

protein binding

extracellular region

plasma membrane

cell adhesion

integral to membrane

anchored to membrane

Cell adhesion molecules (CAMs)

Prion diseases

223424_s_at -0.416 6.552 -3.043 8.109e-03 0.206 -2.491 ZSCAN21 zinc finger and SCAN domain containing 21 7 99485352 AL136865 7q22.1 Hs.632294 9

transcription factor activity

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

transcription activator activity

metal ion binding

 
201362_at -0.719 6.719 -3.043 8.114e-03 0.206 -2.491 IVNS1ABP influenza virus NS1A binding protein 1 -183532144 AF205218 1q25.1-q31.1 Hs.497183 9

protein binding

nucleus

nucleoplasm

transcription factor complex

spliceosomal complex

cytoplasm

cytoskeleton

transcription from RNA polymerase III promoter

RNA splicing

response to virus

interspecies interaction between organisms

 
221539_at 0.751 7.538 3.043 8.115e-03 0.206 -2.491 EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 8 38007176 AB044548 8p12 Hs.411641 107

protein binding

cytosol

eukaryotic initiation factor 4E binding

insulin receptor signaling pathway

negative regulation of translational initiation

ErbB signaling pathway

mTOR signaling pathway

Insulin signaling pathway

Acute myeloid leukemia

226484_at -0.433 8.379 -3.043 8.115e-03 0.206 -2.491 ZBTB47 zinc finger and BTB domain containing 47 3 42675877 AA532640 3p22.1 Hs.409561 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
223386_at -0.584 6.702 -3.043 8.119e-03 0.206 -2.492 FAM118B family with sequence similarity 118, member B 11 125586828 BC001647 11q24.2 Hs.276315 2    
203232_s_at -0.701 7.933 -3.042 8.125e-03 0.206 -2.492 ATXN1 ataxin 1 6 -16407321 NM_000332 6p23 Hs.434961 Hs.712106 65

RNA binding

nucleus

nucleoplasm

nucleolus

cytoplasm

RNA processing

protein C-terminus binding

cell death

poly(U) RNA binding

adult locomotory behavior

visual learning

nuclear matrix

negative regulation of transcription

transcription repressor activity

poly(G) RNA binding

nuclear RNA export factor complex

negative regulation of phosphorylation

nuclear inclusion body

identical protein binding

negative regulation of insulin-like growth factor receptor signaling pathway

protein self-association

positive regulation of transcription from RNA polymerase II promoter

nuclear export

regulation of excitatory postsynaptic membrane potential

 
1569906_s_at -0.404 6.371 -3.042 8.128e-03 0.206 -2.493 PHF20 PHD finger protein 20 20 33823336 BC015538 20q11.22-q11.23 Hs.517044 11

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
212885_at -0.582 7.356 -3.042 8.131e-03 0.206 -2.493 MPHOSPH10 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) 2 71210951 AL545921 2p13.3 Hs.656208 10

protein binding

nucleus

nucleolus

small nucleolar ribonucleoprotein complex

rRNA processing

RNA splicing

RNA splicing factor activity, transesterification mechanism

 
1565329_at 0.557 2.450 3.041 8.147e-03 0.206 -2.495 POLE4 polymerase (DNA-directed), epsilon 4 (p12 subunit) 2 75039282 AY034104 2p12 Hs.469060 5

DNA-directed DNA polymerase activity

protein binding

intracellular

nucleus

transferase activity

nucleotidyltransferase activity

sequence-specific DNA binding

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

DNA replication

Base excision repair

Nucleotide excision repair

201580_s_at -0.609 7.082 -3.039 8.173e-03 0.207 -2.498 TMX4 thioredoxin-related transmembrane protein 4 20 -7909715 AL544094 20p12 Hs.169358 11

mitochondrion

transport

membrane

integral to membrane

electron transport chain

cell redox homeostasis

 
226090_x_at -0.518 5.883 -3.039 8.174e-03 0.207 -2.498 RABL3 RAB, member of RAS oncogene family-like 3 3 -121888217 AK025772 3q13.33 Hs.444360 1

nucleotide binding

GTP binding

intracellular

small GTPase mediated signal transduction

 
225921_at -0.945 7.246 -3.039 8.174e-03 0.207 -2.498 NIN ninein (GSK3B interacting protein) 14 -50263700, -50262296, -50262296, -50256230 AL359571 14q22.1 Hs.310429 23

nucleotide binding

protein binding

GTP binding

centrosome

microtubule

centrosome localization

 
201402_at 0.273 7.495 3.039 8.185e-03 0.207 -2.499 ADRBK1 adrenergic, beta, receptor kinase 1 11 66790480 NM_001619 11q13.1 Hs.83636 98

nucleotide binding

regulation of the force of heart contraction

desensitization of G-protein coupled receptor protein signaling pathway

negative regulation of the force of heart contraction by chemical signal

G-protein coupled receptor kinase activity

signal transducer activity

protein binding

ATP binding

soluble fraction

cytoplasm

signal transduction

muscarinic acetylcholine receptor signaling pathway

tachykinin receptor signaling pathway

heart development

membrane

transferase activity

peptidyl-serine phosphorylation

peptidyl-threonine phosphorylation

positive regulation of catecholamine secretion

negative regulation of striated muscle contraction

beta-adrenergic receptor kinase activity

cardiac muscle contraction

Chemokine signaling pathway

Endocytosis

210418_s_at 0.619 10.152 3.039 8.186e-03 0.207 -2.499 IDH3B isocitrate dehydrogenase 3 (NAD+) beta 20 -2587040 AF023265 20p13 Hs.436405 14

magnesium ion binding

isocitrate dehydrogenase (NAD+) activity

mitochondrion

mitochondrial matrix

tricarboxylic acid cycle

isocitrate metabolic process

visual perception

electron carrier activity

oxidoreductase activity

oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

manganese ion binding

response to stimulus

NAD or NADH binding

oxidation reduction

Citrate cycle (TCA cycle)

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

214359_s_at -0.499 9.104 -3.039 8.187e-03 0.207 -2.499 HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 6 44322826 AI218219 6p12 Hs.509736 Hs.689683 Hs.701787 50

nucleotide binding

ATP binding

cytoplasm

protein folding

response to unfolded protein

nitric-oxide synthase regulator activity

TPR domain binding

negative regulation of proteasomal ubiquitin-dependent protein catabolic process

melanosome

positive regulation of nitric oxide biosynthetic process

unfolded protein binding

regulation of interferon-gamma-mediated signaling pathway

regulation of type I interferon-mediated signaling pathway

Antigen processing and presentation

Pathways in cancer

Prostate cancer

220924_s_at -1.015 9.558 -3.038 8.195e-03 0.207 -2.500 SLC38A2 solute carrier family 38, member 2 12 -45038238 NM_018976 12q Hs.221847 20

plasma membrane

ion transport

sodium ion transport

amino acid transport

symporter activity

integral to membrane

sodium ion binding

 
230009_at -0.543 6.502 -3.038 8.197e-03 0.207 -2.501 FAM118B family with sequence similarity 118, member B 11 125586828 AI936072 11q24.2 Hs.276315 2    
207616_s_at -0.628 8.047 -3.037 8.209e-03 0.207 -2.502 TANK TRAF family member-associated NFKB activator 2 161701711, 161701711 NM_004180 2q24-q31 Hs.132257 22

protein binding

cytoplasm

signal transduction

zinc ion binding

metal ion binding

RIG-I-like receptor signaling pathway

201456_s_at -0.616 6.348 -3.037 8.210e-03 0.207 -2.502 BUB3 budding uninhibited by benzimidazoles 3 homolog (yeast) 10 124903749 AU160695 10q26 Hs.418533 28

kinetochore

protein binding

nucleus

nucleolus

cytosol

mitosis

mitotic cell cycle checkpoint

cell proliferation

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

216197_at 0.385 4.660 3.037 8.212e-03 0.207 -2.502 ATF7IP activating transcription factor 7 interacting protein 12 14409877 AK021569 12p13.1 Hs.714407 17

negative regulation of transcription from RNA polymerase II promoter

transcription corepressor activity

protein binding

nucleus

transcription factor complex

cytoplasm

DNA methylation

ATPase activity

interspecies interaction between organisms

regulation of transcription

positive regulation of transcription, DNA-dependent

regulation of transcriptional preinitiation complex assembly

 
223465_at -0.678 6.401 -3.037 8.217e-03 0.207 -2.503 COL4A3BP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein 5 -74702683, -74702683 BE967275 5q13.3 Hs.270437 26

protein kinase activity

protein binding

cellular_component

cytoplasm

endoplasmic reticulum

Golgi apparatus

protein amino acid phosphorylation

lipid transport

immune response

 
213741_s_at -1.115 5.508 -3.037 8.222e-03 0.207 -2.503 KPNA1 karyopherin alpha 1 (importin alpha 5) 3 -123623437 BF575685 3q21 Hs.161008 92

regulation of DNA recombination

protein binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

cytosol

NLS-bearing substrate import into nucleus

intracellular protein transport

nuclear localization sequence binding

protein transporter activity

interspecies interaction between organisms

 
202601_s_at -0.477 5.129 -3.036 8.240e-03 0.207 -2.505 HTATSF1 HIV-1 Tat specific factor 1 X 135406903, 135407336 AI373539 Xq26.1-q27.2 Hs.204475 27

nucleotide binding

RNA polymerase II transcription factor activity

transcription elongation regulator activity

RNA binding

protein binding

nucleus

nucleolus

regulation of transcription from RNA polymerase II promoter

viral genome replication

regulation of transcription

 
218438_s_at -0.566 7.314 -3.035 8.253e-03 0.207 -2.507 MED28 mediator complex subunit 28 4 17225370 NM_025205 4p16 Hs.434075 Hs.644788 14

actin binding

protein binding

nucleus

cytoplasm

membrane

regulation of transcription

 
225658_at -0.652 7.263 -3.035 8.255e-03 0.207 -2.507 SPOPL speckle-type POZ protein-like 2 138975819 BF034206 2q22.1 Hs.333297 6

protein binding

nucleus

modification-dependent protein catabolic process

 
205872_x_at -0.762 11.364 -3.034 8.267e-03 0.207 -2.508 PDE4DIP phosphodiesterase 4D interacting protein 1 -143663117, -143663117, -143601947, -143601947, -143562783 NM_022359 1q12 Hs.584841 Hs.613082 Hs.657186 Hs.657490 Hs.719077 10

nucleus

cytoplasm

Golgi apparatus

centrosome

 
212259_s_at -0.504 7.591 -3.034 8.273e-03 0.207 -2.509 PBXIP1 pre-B-cell leukemia homeobox interacting protein 1 1 -153183179 BF344265 1q21.3 Hs.505806 8

transcription corepressor activity

protein binding

nucleus

cytoplasm

cytosol

cytoskeleton

microtubule

multicellular organismal development

negative regulation of transcription

cell differentiation

 
202873_at 0.283 4.301 3.034 8.273e-03 0.207 -2.509 ATP6V1C1 ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1 8 104102423 BF034973 8q22.3 Hs.86905 19

transporter activity

protein binding

plasma membrane

ion transport

ATP synthesis coupled proton transport

proton transport

proton-transporting two-sector ATPase complex

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

proton-transporting V-type ATPase, V1 domain

proton-transporting ATPase activity, rotational mechanism

Oxidative phosphorylation

Metabolic pathways

Vibrio cholerae infection

Epithelial cell signaling in Helicobacter pylori infection

1558556_at 0.395 4.450 3.033 8.277e-03 0.207 -2.509 CAMK1 calcium/calmodulin-dependent protein kinase I 3 -9774030 AL041824 3p25.3 Hs.434875 31

nucleotide binding

calmodulin-dependent protein kinase activity

calmodulin binding

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

nucleocytoplasmic transport

signal transduction

multicellular organismal development

nervous system development

transferase activity

cell differentiation

 
211330_s_at 0.344 4.123 3.033 8.278e-03 0.207 -2.509 HFE hemochromatosis 6 26195487 AF144242 6p21.3 Hs.233325 592

antigen processing and presentation of peptide antigen via MHC class I

iron ion binding

protein binding

cytoplasm

early endosome

plasma membrane

integral to plasma membrane

protein complex assembly

ion transport

iron ion transport

cellular iron ion homeostasis

receptor-mediated endocytosis

immune response

antigen processing and presentation

cytoplasmic vesicle

MHC class I protein complex

apical part of cell

basal part of cell

perinuclear region of cytoplasm

recycling endosome

 
225152_at -0.431 7.232 -3.033 8.282e-03 0.207 -2.510 ZNF622 zinc finger protein 622 5 -16504627 BF940944 5p15.1 Hs.60300 5

nucleic acid binding

intracellular

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
213750_at -0.396 8.432 -3.032 8.293e-03 0.207 -2.511 RSL1D1 ribosomal L1 domain containing 1 16 -11835555 AA928506 16p13.13 Hs.401842 17

RNA binding

structural constituent of ribosome

protein binding

intracellular

nucleus

nucleolus

ribosome

RNA processing

translation

regulation of protein localization

 
212533_at -0.799 6.044 -3.032 8.296e-03 0.207 -2.511 WEE1 WEE1 homolog (S. pombe) 11 9551803, 9552809 X62048 11p15.3-p15.1 Hs.249441 61

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

non-membrane spanning protein tyrosine kinase activity

protein binding

ATP binding

nucleus

nucleoplasm

protein amino acid phosphorylation

cell cycle

mitosis

transferase activity

cell division

Cell cycle

231995_at -0.623 4.497 -3.032 8.302e-03 0.207 -2.512 C9orf82 chromosome 9 open reading frame 82 9 -26830682 AF131768 9p21.2 Hs.178357 10    
241819_at 0.415 2.951 3.032 8.305e-03 0.207 -2.512 TNFSF8 tumor necrosis factor (ligand) superfamily, member 8 9 -116704944 AW518486 9q33 Hs.654445 19

cytokine activity

tumor necrosis factor receptor binding

extracellular space

integral to plasma membrane

induction of apoptosis

immune response

signal transduction

cell-cell signaling

cell proliferation

membrane

Cytokine-cytokine receptor interaction

212293_at -0.628 7.620 -3.031 8.310e-03 0.207 -2.513 HIPK1 homeodomain interacting protein kinase 1 1 114273518, 114273518, 114295289, 114298021 BG111260 1p13.2 Hs.532363 11

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

nucleolus

cytoplasm

centrosome

protein amino acid phosphorylation

transferase activity

regulation of transcription

 
228988_at 1.405 4.851 3.031 8.311e-03 0.207 -2.513 ZNF711 zinc finger protein 711 X 84385652 AU157017 Xq21.1-q21.2 Hs.326801 7

DNA binding

intracellular

nucleus

zinc ion binding

transcription regulator activity

regulation of transcription

metal ion binding

 
202748_at -1.117 7.016 -3.030 8.332e-03 0.207 -2.515 GBP2 guanylate binding protein 2, interferon-inducible 1 -89345897 NM_004120 1p22.2 Hs.386567 13

nucleotide binding

GTPase activity

GTP binding

plasma membrane

immune response

 
208709_s_at -0.408 9.962 -3.030 8.333e-03 0.207 -2.515 NRD1 nardilysin (N-arginine dibasic convertase) 1 -52027453 U64898 1p32.2-p32.1 Hs.584782 18

metalloendopeptidase activity

protein binding

cytosol

proteolysis

neuromuscular junction development

peptidase activity

zinc ion binding

cell proliferation

cell surface

cell migration

metal ion binding

epidermal growth factor binding

positive regulation of membrane protein ectodomain proteolysis

regulation of endopeptidase activity

 
204223_at 0.586 5.014 3.030 8.334e-03 0.207 -2.516 PRELP proline/arginine-rich end leucine-rich repeat protein 1 201711505 NM_002725 1q32 Hs.632481 13

skeletal system development

extracellular matrix structural constituent

protein binding

extracellular region

proteinaceous extracellular matrix

cell aging

 
226599_at 0.409 5.277 3.030 8.338e-03 0.207 -2.516 FHDC1 FH2 domain containing 1 4 154083584 AA527080 4q31.3 Hs.132629 5

actin binding

cellular component organization

actin cytoskeleton organization

 
209024_s_at -0.612 7.262 -3.030 8.339e-03 0.207 -2.516 SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 6 -86380411, -86380411, -86374221, -86374221, -86374221, -86374221 AI472757 6q14-q15 Hs.571177 33

nucleotide binding

RNA binding

protein binding

nucleus

nucleoplasm

spliceosomal complex

cytoplasm

endoplasmic reticulum

microsome

mRNA processing

poly(A) RNA binding

RNA splicing

interspecies interaction between organisms

 
219408_at -0.445 6.260 -3.030 8.339e-03 0.207 -2.516 PRMT7 protein arginine methyltransferase 7 16 66902445 NM_019023 16q22.1 Hs.712584 9

spliceosomal snRNP biogenesis

nucleus

cytoplasm

cytosol

genetic imprinting

S-adenosylmethionine-dependent methyltransferase activity

[myelin basic protein]-arginine N-methyltransferase activity

chromatin modification

transferase activity

peptidyl-arginine methylation

cell differentiation

histone arginine methylation

protein-arginine omega-N monomethyltransferase activity

protein-arginine omega-N symmetric methyltransferase activity

protein-arginine omega-N symmetric methyltransferase activity

histone binding

ribonucleoprotein binding

DNA methylation during gametogenesis

regulation of protein binding

histone methyltransferase activity (H4-R3 specific)

regulation of transcription

 
205752_s_at 0.416 5.874 3.030 8.340e-03 0.207 -2.516 GSTM5 glutathione S-transferase mu 5 1 110056386 NM_000851 1p13.3 Hs.75652 15

glutathione transferase activity

cytoplasm

metabolic process

transferase activity

Glutathione metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

214088_s_at 0.271 5.204 3.030 8.340e-03 0.207 -2.516 FUT3 fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group) 19 -5793898 AW080549 19p13.3 Hs.169238 55

membrane fraction

Golgi apparatus

carbohydrate metabolic process

protein amino acid glycosylation

membrane

integral to membrane

transferase activity, transferring glycosyl groups

3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase activity

Glycosphingolipid biosynthesis - lacto and neolacto series

Metabolic pathways

206235_at -0.529 4.536 -3.028 8.361e-03 0.207 -2.519 LIG4 ligase IV, DNA, ATP-dependent 13 -107657792, -107657792, -107657792 NM_002312 13q33-q34 Hs.166091 82

single strand break repair

nucleotide binding

magnesium ion binding

condensed chromosome

in utero embryonic development

pro-B cell differentiation

DNA binding

DNA ligase (ATP) activity

ATP binding

intracellular

nucleus

cytoplasm

plasma membrane

focal adhesion

DNA-dependent protein kinase-DNA ligase 4 complex

DNA replication

nucleotide-excision repair, DNA gap filling

double-strand break repair via nonhomologous end joining

double-strand break repair via nonhomologous end joining

response to DNA damage stimulus

cell cycle

central nervous system development

protein C-terminus binding

cell proliferation

response to X-ray

response to gamma radiation

ligase activity

provirus integration

initiation of viral infection

DNA ligase IV complex

DNA ligase IV complex

T cell differentiation in the thymus

immunoglobulin V(D)J recombination

T cell receptor V(D)J recombination

somatic stem cell maintenance

negative regulation of neuron apoptosis

isotype switching

positive regulation of fibroblast proliferation

positive regulation of neurogenesis

DNA ligation during DNA recombination

DNA ligation during DNA repair

DNA ligation during DNA repair

chromosome organization

cell division

Non-homologous end-joining

211060_x_at -0.377 8.053 -3.028 8.365e-03 0.207 -2.519 GPAA1 glycosylphosphatidylinositol anchor attachment protein 1 homolog (yeast) 8 145209511 BC006383 8q24.3 Hs.627962 16

GPI-anchor transamidase activity

protein binding

endoplasmic reticulum

protein complex assembly

protein retention in ER lumen

tubulin binding

membrane

integral to membrane

attachment of GPI anchor to protein

attachment of GPI anchor to protein

attachment of GPI anchor to protein

GPI anchor binding

GPI-anchor transamidase complex

Glycosylphosphatidylinositol(GPI)-anchor biosynthesis

Metabolic pathways

227780_s_at 0.446 6.601 3.028 8.365e-03 0.207 -2.519 ECSCR endothelial cell-specific chemotaxis regulator 5 -138812143 AI422211 5q31.2 Hs.483538 Hs.570903 5

angiogenesis

plasma membrane

chemotaxis

multicellular organismal development

integral to membrane

cell differentiation

 
207284_s_at -0.604 6.962 -3.028 8.367e-03 0.207 -2.519 ASPH aspartate beta-hydroxylase 8 -62739837, -62699648, -62699648, -62575669 NM_020164 8q12.1 Hs.591874 24

peptide-aspartate beta-dioxygenase activity

binding

iron ion binding

calcium ion binding

endoplasmic reticulum

endoplasmic reticulum membrane

muscle contraction

pattern specification process

negative regulation of cell proliferation

structural constituent of muscle

electron carrier activity

membrane

integral to membrane

oxidoreductase activity

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

peptidyl-amino acid modification

integral to endoplasmic reticulum membrane

limb morphogenesis

peptidyl-aspartic acid hydroxylation

oxidation reduction

palate development

face morphogenesis

 
221766_s_at -0.519 6.569 -3.028 8.372e-03 0.207 -2.520 FAM46A family with sequence similarity 46, member A 6 -82512165 AW246673 6q14 Hs.10784 11    
219065_s_at -0.679 9.125 -3.027 8.379e-03 0.207 -2.521 MEMO1 mediator of cell motility 1 2 -31946398, -31946397 NM_015955 2p22-p21 Hs.444969 10

nucleus

cytosol

 
201926_s_at -0.618 7.311 -3.027 8.390e-03 0.208 -2.522 CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 1 205561439 BC001288 1q32 Hs.126517 118

soluble fraction

plasma membrane

integral to plasma membrane

complement activation, classical pathway

elevation of cytosolic calcium ion concentration

anchored to membrane

innate immune response

membrane raft

respiratory burst

Complement and coagulation cascades

Hematopoietic cell lineage

212103_at -0.468 7.476 -3.027 8.391e-03 0.208 -2.522 KPNA6 karyopherin alpha 6 (importin alpha 7) 1 32346230 BG403834 1p35.1-p34.3 Hs.470588 Hs.711019 53

protein binding

nucleus

nuclear pore

cytoplasm

NLS-bearing substrate import into nucleus

intracellular protein transport

protein transporter activity

 
204592_at 0.488 4.637 3.026 8.398e-03 0.208 -2.523 DLG4 discs, large homolog 4 (Drosophila) 17 -7033935, -7033933 NM_001365 17p13.1 Hs.463928 119

cytoplasm

plasma membrane

protein complex assembly

signal transduction

synaptic transmission

nervous system development

learning

protein C-terminus binding

postsynaptic density

synaptic vesicle maturation

synaptosome

cell junction

cortical cytoskeleton

extrinsic to internal side of plasma membrane

alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex

synapse

postsynaptic membrane

regulation of long-term neuronal synaptic plasticity

Huntington's disease

217816_s_at -0.417 9.041 -3.026 8.404e-03 0.208 -2.523 PCNP PEST proteolytic signal containing nuclear protein 3 102775731 NM_020357 3q12.3 Hs.545311 Hs.654949 6

protein binding

nucleus

cell cycle

protein ubiquitination

proteasomal ubiquitin-dependent protein catabolic process

 
209674_at -0.685 6.958 -3.026 8.406e-03 0.208 -2.523 CRY1 cryptochrome 1 (photolyase-like) 12 -105909271 D83702 12q23-q24.1 Hs.151573 23

nucleotide binding

DNA binding

DNA photolyase activity

nucleus

cytoplasm

mitochondrion

DNA repair

circadian rhythm

G-protein coupled photoreceptor activity

protein-chromophore linkage

regulation of transcription

response to stimulus

Circadian rhythm - mammal

217717_s_at -0.446 8.101 -3.025 8.418e-03 0.208 -2.525 YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide 20 42947757 BF246499 20q13.1 Hs.643544 109

cytoplasm

cytosol

protein targeting

Ras protein signal transduction

activation of pro-apoptotic gene products

enzyme binding

protein domain specific binding

negative regulation of protein amino acid dephosphorylation

melanosome

positive regulation of catalytic activity

perinuclear region of cytoplasm

Cell cycle

Neurotrophin signaling pathway

208630_at 0.482 9.543 3.024 8.428e-03 0.208 -2.526 HADHA hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), alpha subunit 2 -26267007 AI972144 2p23 Hs.516032 36

acyl-CoA binding

3-hydroxyacyl-CoA dehydrogenase activity

acetyl-CoA C-acetyltransferase activity

acetyl-CoA C-acyltransferase activity

enoyl-CoA hydratase activity

binding

mitochondrion

mitochondrial inner membrane

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

oxidoreductase activity

fatty acid beta-oxidation multienzyme complex

long-chain-enoyl-CoA hydratase activity

long-chain-3-hydroxyacyl-CoA dehydrogenase activity

lyase activity

response to drug

mitochondrial nucleoid

NAD or NADH binding

oxidation reduction

Fatty acid elongation in mitochondria

Fatty acid metabolism

Valine, leucine and isoleucine degradation

Lysine degradation

Tryptophan metabolism

beta-Alanine metabolism

Benzoate degradation via CoA ligation

Propanoate metabolism

Butanoate metabolism

Limonene and pinene degradation

Caprolactam degradation

Biosynthesis of unsaturated fatty acids

Metabolic pathways

205120_s_at -0.508 8.075 -3.024 8.433e-03 0.208 -2.526 SGCB sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) 4 -52581617 U29586 4q12 Hs.438953 28

cytoplasm

cytoskeleton

plasma membrane

integral to plasma membrane

cytoskeleton organization

muscle organ development

sarcoglycan complex

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

223143_s_at -0.843 5.361 -3.024 8.435e-03 0.208 -2.527 AKIRIN2 akirin 2 6 -88441298 AI742378 6q15 Hs.485915 10

protein binding

nucleus

embryonic development

transcriptional repressor complex

response to lipopolysaccharide

positive regulation of interleukin-6 production

innate immune response

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

 
226525_at -0.534 5.070 -3.024 8.436e-03 0.208 -2.527 STK17B serine/threonine kinase 17b 2 -196706552 N51102 2q32.3 Hs.710234 Hs.88297 7

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

protein amino acid phosphorylation

apoptosis

induction of apoptosis

protein kinase cascade

actin cytoskeleton

transferase activity

 
211220_s_at -1.201 4.581 -3.024 8.439e-03 0.208 -2.527 HSF2 heat shock transcription factor 2 6 122762394 BC005329 6q22.31 Hs.158195 28

transcription factor activity

transcription coactivator activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

response to stress

spermatogenesis

protein homodimerization activity

sequence-specific DNA binding

 
224878_at -0.475 8.142 -3.024 8.439e-03 0.208 -2.527 UBFD1 ubiquitin family domain containing 1 16 23476362 N63936 16p12 Hs.3459 3    
202372_at -0.366 6.772 -3.024 8.443e-03 0.208 -2.527 RAB3GAP2 RAB3 GTPase activating protein subunit 2 (non-catalytic) 1 -218388232 BF240652 1q41 Hs.654849 Hs.708165 14

GTPase activator activity

protein binding

soluble fraction

cytoplasm

intracellular protein transport

regulation of GTPase activity

protein heterodimerization activity

 
209211_at -1.362 4.661 -3.023 8.457e-03 0.208 -2.529 KLF5 Kruppel-like factor 5 (intestinal) 13 72531142 AF132818 13q22.1 Hs.508234 50

angiogenesis

transcription factor activity

RNA polymerase II transcription factor activity

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

zinc ion binding

positive regulation of cell proliferation

microvillus assembly

positive regulation of transcription

metal ion binding

 
214505_s_at -1.025 12.494 -3.023 8.459e-03 0.208 -2.529 FHL1 four and a half LIM domains 1 X 135056526, 135057224, 135058402, 135079120, 135079731, 135106578, 135106720 AF220153 Xq26 Hs.435369 38

molecular_function

cellular_component

nucleus

cytoplasm

cytosol

multicellular organismal development

muscle organ development

zinc ion binding

organ morphogenesis

cell growth

cell differentiation

metal ion binding

 
209613_s_at 1.257 6.961 3.022 8.474e-03 0.208 -2.531 ADH1B alcohol dehydrogenase 1B (class I), beta polypeptide 4 -100446549 M21692 4q21-q23 Hs.4 193

alcohol dehydrogenase (NAD) activity

binding

cytoplasm

ethanol oxidation

zinc ion binding

oxidoreductase activity

metal ion binding

oxidation reduction

Glycolysis / Gluconeogenesis

Fatty acid metabolism

Tyrosine metabolism

1- and 2-Methylnaphthalene degradation

3-Chloroacrylic acid degradation

Retinol metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

Metabolic pathways

225267_at -0.709 9.492 -3.021 8.484e-03 0.208 -2.532 KPNA4 karyopherin alpha 4 (importin alpha 3) 3 -161700655 AI935246 3q25.33 Hs.715552 53

protein binding

nucleus

nuclear pore

cytoplasm

NLS-bearing substrate import into nucleus

intracellular protein transport

protein transporter activity

 
228624_at 0.381 4.156 3.021 8.487e-03 0.208 -2.532 TMEM144 transmembrane protein 144 4 159350850 AI432488 4q32.1 Hs.718582 2

membrane

integral to membrane

 
209821_at 0.558 3.848 3.021 8.488e-03 0.208 -2.532 IL33 interleukin 33 9 6231677 AB024518 9p24.1 Hs.348390 32

cytokine activity

protein binding

extracellular region

extracellular space

 
203841_x_at -0.454 4.718 -3.021 8.493e-03 0.208 -2.533 MAPRE3 microtubule-associated protein, RP/EB family, member 3 2 27047028 BG222594 2p23.3-p23.1 Hs.515860 13

small GTPase regulator activity

cytoplasm

microtubule

cell cycle

mitosis

microtubule binding

midbody

positive regulation of gene-specific transcription

cell division

 
223468_s_at -0.648 7.311 -3.020 8.508e-03 0.209 -2.534 RGMA RGM domain family, member A 15 -91387640 AL136826 15q26.1 Hs.271277 16

neural tube closure

endoplasmic reticulum

plasma membrane

cell surface

regulation of BMP signaling pathway

anchored to membrane

 
228087_at -0.390 7.124 -3.020 8.509e-03 0.209 -2.534 CCDC126 coiled-coil domain containing 126 7 23603522 AK026684 7p15.3 Hs.232296 4

extracellular region

 
228376_at 0.566 5.826 3.019 8.532e-03 0.209 -2.537 GGTA1 glycoprotein, alpha-galactosyltransferase 1 9 -123257139 AI972498 9q33.2-q34.11 Hs.97469 6

Golgi apparatus

carbohydrate metabolic process

membrane

integral to membrane

transferase activity, transferring hexosyl groups

 
205584_at -0.359 6.114 -3.018 8.548e-03 0.209 -2.539 ALG13 asparagine-linked glycosylation 13 homolog (S. cerevisiae) X 110811068 NM_024810 Xq23 Hs.443061 14

N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity

endoplasmic reticulum

carbohydrate metabolic process

transferase activity, transferring hexosyl groups

carbohydrate binding

lipid glycosylation

N-Glycan biosynthesis

Metabolic pathways

224520_s_at -1.231 6.695 -3.017 8.555e-03 0.209 -2.539 BEST3 bestrophin 3 12 -68333655, -68333655 BC006440 12q14.2-q15 Hs.280782 7

molecular_function

ion channel activity

chloride channel activity

calcium ion binding

plasma membrane

ion transport

biological_process

integral to membrane

chloride ion binding

chloride channel complex

 
203977_at 0.316 7.185 3.017 8.559e-03 0.209 -2.540 TAZ tafazzin X 153293070 NM_000116 Xq28 Hs.409911 35

cytoplasm

mitochondrion

mitochondrion

muscle contraction

skeletal muscle tissue development

metabolic process

acyltransferase activity

membrane

integral to membrane

hemopoiesis

cardiolipin biosynthetic process

mitochondrial respiratory chain complex I assembly

cristae formation

mitochondrial ATP synthesis coupled electron transport

1-acylglycerophosphocholine O-acyltransferase activity

cardiac muscle tissue development

cardiac muscle contraction

 
227865_at 0.438 5.673 3.016 8.576e-03 0.209 -2.542 C9orf103 chromosome 9 open reading frame 103 9 85427785 BF111242 9q21-q22 Hs.530261 1

nucleotide binding

molecular_function

shikimate kinase activity

ATP binding

cellular_component

carbohydrate metabolic process

biological_process

transferase activity

gluconokinase activity

 
229092_at -0.452 5.750 -3.016 8.579e-03 0.209 -2.542 NR2F2 nuclear receptor subfamily 2, group F, member 2 15 94670160, 94675114, 94676797, 94677572 AI420144 15q26 Hs.657455 27

transcription factor activity

ligand-regulated transcription factor activity

steroid hormone receptor activity

transcription corepressor activity

nucleus

regulation of transcription from RNA polymerase II promoter

lipid metabolic process

signal transduction

zinc ion binding

sequence-specific DNA binding

metal ion binding

 
222679_s_at -0.747 5.615 -3.016 8.583e-03 0.209 -2.542 DCUN1D1 DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) 3 -184143252 AW468880 3q26.3 Hs.715661 16

molecular_function

cellular_component

biological_process

modification-dependent protein catabolic process

 
217839_at -0.522 8.919 -3.015 8.586e-03 0.209 -2.543 TFG TRK-fused gene 3 101910849 NM_006070 3q12.2 Hs.518123 25

signal transducer activity

cytoplasm

identical protein binding

positive regulation of I-kappaB kinase/NF-kappaB cascade

Pathways in cancer

Thyroid cancer

1557211_a_at -0.556 3.385 -3.013 8.622e-03 0.210 -2.547 C14orf86 chromosome 14 open reading frame 86 14 -93440828 BC037859 14q32.12 Hs.585649 1    
1552729_at 0.264 4.521 3.013 8.623e-03 0.210 -2.547 SNHG7 small nucleolar RNA host gene 7 (non-protein coding) 9 -138739506, -138738868 NM_032887 9q34.3 Hs.636619 2    
203384_s_at -0.362 5.872 -3.013 8.624e-03 0.210 -2.547 GOLGA1 golgi autoantigen, golgin subfamily a, 1 9 -126680394 NM_002077 9q33.3 Hs.133469 Hs.59504 11

Golgi apparatus

membrane

 
218343_s_at -0.543 6.702 -3.013 8.637e-03 0.210 -2.548 GTF3C3 general transcription factor IIIC, polypeptide 3, 102kDa 2 -197337344 NM_012086 2q33.1 Hs.470996 10

transcription factor TFIIIC complex

DNA binding

RNA polymerase III transcription factor activity

binding

nucleus

transcription, DNA-dependent

5S class rRNA transcription

tRNA transcription from RNA polymerase III promoter

 
205738_s_at 1.170 11.432 3.012 8.648e-03 0.210 -2.549 FABP3 fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor) 1 -31610686 NM_004102 1p33-p32 Hs.657242 35

transporter activity

cytoplasm

phosphatidylcholine biosynthetic process

transport

negative regulation of cell proliferation

lipid binding

PPAR signaling pathway

228256_s_at 0.495 5.578 3.012 8.655e-03 0.211 -2.550 EPB41L4A erythrocyte membrane protein band 4.1 like 4A 5 -111526213 AU144565 5q22.1-q22.2 Hs.584954 7

binding

cellular_component

cytoplasm

cytoskeleton

cytoskeletal protein binding

biological_process

extrinsic to membrane

 
218642_s_at 0.469 7.636 3.011 8.660e-03 0.211 -2.551 CHCHD7 coiled-coil-helix-coiled-coil-helix domain containing 7 8 57286868 NM_024300 8q12.1 Hs.436913 9    
202696_at -0.407 8.252 -3.011 8.669e-03 0.211 -2.551 OXSR1 oxidative-stress responsive 1 3 38182029 NM_005109 3p22-p21.3 Hs.475970 21

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

response to oxidative stress

protein kinase cascade

transferase activity

identical protein binding

 
210862_s_at 0.338 3.986 3.010 8.687e-03 0.211 -2.553 SARDH sarcosine dehydrogenase 9 -135518506, -135518506 AF047190 9q33-q34 Hs.198003 11

aminomethyltransferase activity

cytoplasm

mitochondrion

mitochondrial matrix

glycine catabolic process

sarcosine dehydrogenase activity

oxidoreductase activity

oxidation reduction

Glycine, serine and threonine metabolism

Metabolic pathways

225606_at 0.763 6.832 3.010 8.690e-03 0.211 -2.554 BCL2L11 BCL2-like 11 (apoptosis facilitator) 2 111594961, 111594961 AI949179 2q13 Hs.469658 143

peripheral to membrane of membrane fraction

in utero embryonic development

B cell homeostasis

B cell apoptosis

kidney development

myeloid cell homeostasis

protein binding

cytoplasm

mitochondrion

mitochondrial outer membrane

cytosol

plasma membrane

induction of apoptosis

cell-matrix adhesion

spermatogenesis

microtubule binding

male gonad development

activation of pro-apoptotic gene products

post-embryonic development

mammary gland development

tube lumen formation

odontogenesis of dentine-containing tooth

T cell homeostasis

ear development

regulation of organ growth

regulation of pigmentation during development

spleen development

thymus development

post-embryonic organ morphogenesis

 
214901_at 0.467 5.371 3.010 8.691e-03 0.211 -2.554 ZNF8 zinc finger protein 8 19 63482129 AI671579 19q13.43 Hs.590941 Hs.713519 8

negative regulation of transcription from RNA polymerase II promoter

DNA binding

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

BMP signaling pathway

metal ion binding

 
209787_s_at -0.397 8.343 -3.010 8.691e-03 0.211 -2.554 HMGN4 high mobility group nucleosomal binding domain 4 6 26646550 BC001282 6p21.3 Hs.236774 6

chromatin

DNA binding

nucleus

 
208689_s_at -0.515 8.190 -3.009 8.692e-03 0.211 -2.554 RPN2 ribophorin II 20 35240869 BC003560 20q12-q13.1 Hs.370895 17

dolichyl-diphosphooligosaccharide-protein glycotransferase activity

protein binding

endoplasmic reticulum

protein modification process

oligosaccharyltransferase complex

membrane

integral to membrane

transferase activity

protein amino acid N-linked glycosylation via asparagine

N-Glycan biosynthesis

Metabolic pathways

204194_at -0.782 5.949 -3.009 8.698e-03 0.211 -2.554 BACH1 BTB and CNC homology 1, basic leucine zipper transcription factor 1 21 29593090, 29593607, 29599430 NM_001186 21q22.11 Hs.154276 30

transcription factor activity

nucleus

nucleolus

cytosol

regulation of transcription, DNA-dependent

sequence-specific DNA binding

protein dimerization activity

 
208877_at -0.396 7.949 -3.008 8.721e-03 0.211 -2.557 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 3 197951124 W74494 3q29 Hs.518530 80

nucleotide binding

protein serine/threonine kinase activity

ATP binding

nucleus

cytoplasm

cytosol

negative regulation of protein kinase activity

apoptosis

signal transduction

membrane

transferase activity

regulation of growth

identical protein binding

interspecies interaction between organisms

protein amino acid autophosphorylation

perinuclear region of cytoplasm

MAPK signaling pathway

ErbB signaling pathway

Axon guidance

Focal adhesion

T cell receptor signaling pathway

Regulation of actin cytoskeleton

Renal cell carcinoma

228831_s_at 0.485 6.001 3.007 8.732e-03 0.211 -2.558 GNG7 guanine nucleotide binding protein (G protein), gamma 7 19 -2462217 AL039870 19p13.3 Hs.515544 12

behavioral fear response

signal transducer activity

heterotrimeric G-protein complex

plasma membrane

signal transduction

receptor guanylyl cyclase signaling pathway

locomotory behavior

regulation of G-protein coupled receptor protein signaling pathway

hormone-mediated signaling

Chemokine signaling pathway

234950_s_at -0.392 6.139 -3.007 8.735e-03 0.211 -2.558 RFWD2 ring finger and WD repeat domain 2 1 -174180589 AK001278 1q25.1-q25.2 Hs.523744 12

protein binding

nucleus

cytoplasm

zinc ion binding

nuclear speck

ligase activity

modification-dependent protein catabolic process

metal ion binding

p53 signaling pathway

Ubiquitin mediated proteolysis

218215_s_at -0.426 6.227 -3.007 8.736e-03 0.211 -2.558 NR1H2 nuclear receptor subfamily 1, group H, member 2 19 55571496 NM_007121 19q13.3-q13.3 Hs.432976 62

transcription factor activity

steroid hormone receptor activity

protein binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

zinc ion binding

positive regulation of specific transcription from RNA polymerase II promoter

negative regulation of foam cell differentiation

positive regulation of triglyceride biosynthetic process

positive regulation of cholesterol efflux

negative regulation of cholesterol storage

negative regulation of transcription

positive regulation of cellular protein metabolic process

negative regulation of lipid transport

sequence-specific DNA binding

cellular lipid metabolic process

positive regulation of fatty acid biosynthetic process

metal ion binding

negative regulation of pinocytosis

positive regulation of lipoprotein lipase activity

 
212343_at -0.557 6.766 -3.007 8.741e-03 0.211 -2.559 YIPF6 Yip1 domain family, member 6 X 67635610 AL117461 Xq12 Hs.700646 Hs.82719 10

endoplasmic reticulum

membrane

integral to membrane

 
225997_at -0.829 6.658 -3.006 8.750e-03 0.211 -2.560 MOBKL1A MOB1, Mps One Binder kinase activator-like 1A (yeast) 4 71986927 AL162039 4q13.3 Hs.700445 Hs.719746 6

protein binding

nucleus

cytoplasm

zinc ion binding

kinase activator activity

kinase binding

protein amino acid autophosphorylation

metal ion binding

 
218393_s_at -0.416 6.287 -3.006 8.754e-03 0.211 -2.560 SMU1 smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) 9 -33031849 NM_018225 9p12 Hs.655351 10

nucleus

cytoplasm

 
204349_at -0.410 6.528 -3.006 8.758e-03 0.211 -2.561 MED7 mediator complex subunit 7 5 -156498028, -156498028 BC005250 5q33.3 Hs.279902 Hs.719330 15

transcription coactivator activity

protein binding

nucleus

transcription factor complex

regulation of transcription from RNA polymerase II promoter

transcription initiation from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

transcription regulator activity

regulation of transcription

 
208152_s_at -0.428 8.322 -3.006 8.761e-03 0.211 -2.561 DDX21 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 10 70385897 NM_004728 10q21 Hs.223141 Hs.576875 18

nucleotide binding

RNA binding

ATP-dependent RNA helicase activity

helicase activity

protein binding

ATP binding

nucleus

nucleolus

hydrolase activity

 
222410_s_at -0.579 8.633 -3.005 8.764e-03 0.211 -2.561 SNX6 sorting nexin 6 14 -34100368, -34100368 AF121856 14q13.1 Hs.583855 7

protein binding

intracellular

cytoplasm

intracellular protein transport

cell communication

negative regulation of epidermal growth factor receptor activity

negative regulation of transcription

negative regulation of transforming growth factor beta receptor signaling pathway

phosphoinositide binding

protein homodimerization activity

 
203679_at -0.467 7.476 -3.005 8.771e-03 0.211 -2.562 TMED1 transmembrane emp24 protein transport domain containing 1 19 -10804113 NM_006858 19p13.2 Hs.515139 6

receptor binding

plasma membrane

transport

signal transduction

cell-cell signaling

integral to membrane

 
222597_at -0.764 4.963 -3.005 8.774e-03 0.211 -2.562 SNAP29 synaptosomal-associated protein, 29kDa 22 19543291 AI346639 22q11.21 Hs.108002 Hs.701035 19

SNAP receptor activity

cytoplasm

plasma membrane

exocytosis

vesicle targeting

membrane fusion

protein transport

synaptosome

cell junction

synapse

SNARE interactions in vesicular transport

212688_at -0.531 7.969 -3.005 8.774e-03 0.211 -2.562 PIK3CB phosphoinositide-3-kinase, catalytic, beta polypeptide 3 -139856920 BC003393 3q22.3 Hs.239818 58

nucleotide binding

activation of MAPK activity

regulation of cell-matrix adhesion

inositol or phosphatidylinositol kinase activity

ATP binding

cytosol

phosphoinositide 3-kinase complex

cellular calcium ion homeostasis

chemotaxis

homophilic cell adhesion

signal transduction

G-protein coupled receptor protein signaling pathway

1-phosphatidylinositol-3-kinase activity

transferase activity

phosphotransferase activity, alcohol group as acceptor

platelet activation

embryonic cleavage

insulin receptor substrate binding

phosphoinositide phosphorylation

phosphatidylinositol-4,5-bisphosphate 3-kinase activity

phosphoinositide-mediated signaling

Inositol phosphate metabolism

ErbB signaling pathway

Chemokine signaling pathway

Phosphatidylinositol signaling system

mTOR signaling pathway

Apoptosis

VEGF signaling pathway

Focal adhesion

Toll-like receptor signaling pathway

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Insulin signaling pathway

Type II diabetes mellitus

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Chronic myeloid leukemia

Acute myeloid leukemia

Small cell lung cancer

Non-small cell lung cancer

213875_x_at -0.582 6.283 -3.005 8.777e-03 0.211 -2.563 C6orf62 chromosome 6 open reading frame 62 6 -24813069 BG252842 6p22.3 Hs.519930 6

molecular_function

cellular_component

intracellular

biological_process

 
1554397_s_at -0.490 4.741 -3.005 8.779e-03 0.211 -2.563 UEVLD UEV and lactate/malate dehyrogenase domains 11 -18509819 BC011011 11p15.1 Hs.407991 5

binding

glycolysis

metabolic process

protein transport

oxidoreductase activity

oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

small conjugating protein ligase activity

modification-dependent protein catabolic process

post-translational protein modification

cellular carbohydrate metabolic process

regulation of protein metabolic process

 
226411_at 0.323 6.033 3.004 8.794e-03 0.211 -2.564 EVI5L ecotropic viral integration site 5-like 19 7801160, 7817385 N32544 19p13.2 Hs.26870 7

GTPase activator activity

Rab GTPase activator activity

protein binding

intracellular

regulation of Rab GTPase activity

 
1555733_s_at 0.267 2.512 3.004 8.798e-03 0.211 -2.565 AP1S3 adaptor-related protein complex 1, sigma 3 subunit 2 -224328290 AF393369 2q36.1 Hs.632555 13

protein binding

Golgi apparatus

cytosol

coated pit

intracellular protein transport

endocytosis

protein transporter activity

membrane

membrane coat

clathrin coat of trans-Golgi network vesicle

clathrin adaptor complex

cytoplasmic vesicle

Lysosome

206021_at 0.434 4.693 3.004 8.798e-03 0.211 -2.565 SCAND2 SCAN domain containing 2 pseudogene 15 82975694 NM_022050 15q25-q26 Hs.658114 7

molecular_function

transcription factor activity

cellular_component

nucleus

regulation of transcription, DNA-dependent

biological_process

 
211382_s_at -0.540 9.133 -3.003 8.809e-03 0.211 -2.566 TACC2 transforming, acidic coiled-coil containing protein 2 10 123738678, 123913094 AF220152 10q26 Hs.501252 Hs.713875 18

protein binding

nucleus

cytoplasm

centrosome

nuclear hormone receptor binding

 
225463_x_at -0.453 6.880 -3.003 8.816e-03 0.211 -2.567 GPR89A G protein-coupled receptor 89A 1 -144475951 BF941168 1q21.1 Hs.559115 Hs.645432 10

signal transducer activity

membrane

integral to membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

 
214769_at -0.536 8.644 -3.003 8.816e-03 0.211 -2.567 CLCN4 chloride channel 4 X 10084984 AF052117 Xp22.3 Hs.495674 17

nucleotide binding

ion channel activity

voltage-gated chloride channel activity

ATP binding

endosome

ion transport

chloride transport

antiporter activity

membrane

integral to membrane

chloride ion binding

 
224977_at -0.512 6.803 -3.002 8.817e-03 0.211 -2.567 C6orf89 chromosome 6 open reading frame 89 6 36961617 AL119182 6p21.2 Hs.433381 10

membrane

integral to membrane

 
214636_at -2.016 2.674 -3.002 8.820e-03 0.211 -2.567 CALCB calcitonin-related polypeptide beta 11 15051721 AA747379 11p15.2-p15.1 Hs.534305 15

neuropeptide hormone activity

extracellular region

soluble fraction

cellular calcium ion homeostasis

signal transduction

vasodilation

 
235032_at -0.544 8.020 -3.001 8.849e-03 0.212 -2.570 DNAJC21 DnaJ (Hsp40) homolog, subfamily C, member 21 5 34965454 BG112118 5p13.2 Hs.131887 5

nucleic acid binding

intracellular

zinc ion binding

heat shock protein binding

metal ion binding

 
203207_s_at -0.571 5.109 -3.001 8.851e-03 0.212 -2.570 MTFR1 mitochondrial fission regulator 1 8 66719441, 66719441, 66744661 BF214329 8q13.1 Hs.584788 8

mitochondrion

plasma membrane

 
228452_at -0.627 6.951 -3.001 8.852e-03 0.212 -2.570 C17orf39 chromosome 17 open reading frame 39 17 17883335 AA827865 17p11.2 Hs.187422 5    
209440_at -0.423 8.355 -3.000 8.853e-03 0.212 -2.570 PRPS1 phosphoribosyl pyrophosphate synthetase 1 X 106758309 BC001605 Xq21.32-q24 Hs.56 26

nucleotide binding

magnesium ion binding

ribose phosphate diphosphokinase activity

ribose phosphate diphosphokinase activity

ribose phosphate diphosphokinase activity

ATP binding

cytosol

purine base metabolic process

purine nucleotide biosynthetic process

pyrimidine nucleotide biosynthetic process

nervous system development

nucleoside metabolic process

ribonucleoside monophosphate biosynthetic process

kinase activity

transferase activity

urate biosynthetic process

protein homodimerization activity

hypoxanthine biosynthetic process

Pentose phosphate pathway

Purine metabolism

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of plant hormones

Metabolic pathways

1553429_at 0.353 5.026 2.999 8.882e-03 0.212 -2.573 FLJ31713 hypothetical protein FLJ31713 9   NM_152575 9q32 Hs.350785 1    
202212_at -0.274 6.664 -2.999 8.886e-03 0.212 -2.574 PES1 pescadillo homolog 1, containing BRCT domain (zebrafish) 22 -29302611 NM_014303 22q12.1 Hs.517543 20

maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

protein binding

intracellular

nucleus

nucleoplasm

nucleolus

rRNA processing

cell proliferation

cell proliferation

preribosome, large subunit precursor

ribosomal large subunit biogenesis

regulation of cell cycle

PeBoW complex

 
201643_x_at -0.352 8.231 -2.999 8.888e-03 0.212 -2.574 KDM3B lysine (K)-specific demethylase 3B 5 137716183 NM_016604 5q31 Hs.714832 14

iron ion binding

nucleus

nucleolus

zinc ion binding

oxidoreductase activity

chromatin modification

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

regulation of transcription

metal ion binding

oxidation reduction

 
240754_at 0.287 3.334 2.998 8.894e-03 0.212 -2.575 LOC284933 hypothetical protein LOC284933 22   AI382197 22q13.32 Hs.159057 1    
1555308_at 0.294 6.034 2.998 8.896e-03 0.212 -2.575 CARD14 caspase recruitment domain family, member 14 17 75766875, 75776193 BC018142 17q25 Hs.675480 Hs.696253 7

positive regulation of protein amino acid phosphorylation

protein binding

intracellular

cytoplasm

plasma membrane

activation of NF-kappaB-inducing kinase activity

regulation of apoptosis

CARD domain binding

 
230418_s_at -0.848 4.456 -2.998 8.899e-03 0.212 -2.575 GALNTL1 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1 14 68796667 AI097463 14q24.1 Hs.21035 4

polypeptide N-acetylgalactosaminyltransferase activity

calcium ion binding

sugar binding

Golgi apparatus

membrane

integral to membrane

transferase activity, transferring glycosyl groups

manganese ion binding

O-Glycan biosynthesis

Metabolic pathways

219428_s_at 0.293 6.736 2.997 8.916e-03 0.212 -2.577 PXMP4 peroxisomal membrane protein 4, 24kDa 20 -31754210 BF057649 20q11.22 Hs.654857 8

membrane fraction

peroxisome

peroxisomal membrane

membrane

integral to membrane

 
217716_s_at -0.348 6.988 -2.997 8.919e-03 0.212 -2.577 SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) 3 129253901 NM_013336 3q21.3 Hs.518236 14

protein binding

endoplasmic reticulum

protein transport

P-P-bond-hydrolysis-driven protein transmembrane transporter activity

membrane

integral to membrane

ribosome binding

intracellular protein transmembrane transport

Vibrio cholerae infection

230718_at 0.385 3.357 2.997 8.925e-03 0.212 -2.578 HSF5 heat shock transcription factor family member 5 17 -53852527 AL137385 17q22 Hs.380061 1

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

sequence-specific DNA binding

 
229030_at 0.415 3.947 2.997 8.925e-03 0.212 -2.578 CAPN8 calpain 8 1 -221781594 AW242997 1q41 Hs.291487 Hs.670199 9

calcium-dependent cysteine-type endopeptidase activity

calcium ion binding

intracellular

cytoplasm

Golgi apparatus

proteolysis

peptidase activity

 
234027_at 0.385 4.212 2.996 8.929e-03 0.212 -2.578 CCDC129 coiled-coil domain containing 129 7 31523502 AI184130 7p14.3 Hs.224269 2    
211609_x_at -0.477 10.078 -2.996 8.942e-03 0.213 -2.580 PSMD4 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 1 149493820 U51007 1q21.3 Hs.505059 62

proteasome complex

protein binding

cytosol

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

228163_at 0.325 5.676 2.996 8.944e-03 0.213 -2.580 ST6GALNAC4 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 9 -129709985 BE858453 9q34 Hs.3972 Hs.709827 13

soluble fraction

nucleus

Golgi apparatus

protein amino acid glycosylation

glycolipid metabolic process

membrane

integral to membrane

integral to Golgi membrane

(alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3)-N-acetyl-galactosaminide 6-alpha-sialyltransferase activity

Glycosphingolipid biosynthesis - ganglio series

Metabolic pathways

229389_at 0.384 5.089 2.994 8.977e-03 0.213 -2.583 ATG16L2 ATG16 autophagy related 16-like 2 (S. cerevisiae) 11 72203098 AA741058 11q13.4 Hs.653186 3

cytoplasm

autophagy

protein transport

 
228953_at -0.598 6.967 -2.993 8.981e-03 0.213 -2.584 WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules 15 81275026 AI023634 15q25.2 Hs.377360 5

actin binding

cytoplasm

ER-Golgi intermediate compartment

Golgi apparatus

membrane

cytoplasmic vesicle membrane

cytoplasmic vesicle

 
219584_at 1.454 5.503 2.993 8.988e-03 0.213 -2.584 PLA1A phospholipase A1 member A 3 120799411 NM_015900 3q13.13-q13.2 Hs.437451 11

extracellular region

phosphatidylserine metabolic process

phospholipase A1 activity

lipid catabolic process

hydrolase activity

Tropane, piperidine and pyridine alkaloid biosynthesis

225157_at -0.619 9.347 -2.993 8.992e-03 0.213 -2.585 MLXIP MLX interacting protein 12 121001142 AW245631 12q24.31 Hs.437153 7

DNA binding

nucleus

cytoplasm

mitochondrion

mitochondrial outer membrane

membrane

transcription regulator activity

regulation of transcription

 
200737_at -0.836 8.965 -2.992 9.003e-03 0.213 -2.586 PGK1 phosphoglycerate kinase 1 X 77246321 NM_000291 Xq13 Hs.78771 52

nucleotide binding

phosphoglycerate kinase activity

ATP binding

cytoplasm

glycolysis

phosphorylation

transferase activity

Glycolysis / Gluconeogenesis

Carbon fixation in photosynthetic organisms

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

215675_at 0.371 5.001 2.992 9.017e-03 0.213 -2.587 TEF thyrotrophic embryonic factor 22 40093337, 40107908 AB051442 22q13 22q13.2 Hs.181159 14

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

sequence-specific DNA binding

protein dimerization activity

rhythmic process

 
1552899_at 0.570 4.863 2.991 9.019e-03 0.213 -2.587 RP4-662A9.2 hypothetical protein MGC34034 6 134183977 NM_153224 6q23.2 Hs.126165 1    
218041_x_at -0.972 9.513 -2.991 9.023e-03 0.213 -2.588 SLC38A2 solute carrier family 38, member 2 12 -45038238 NM_018573 12q Hs.221847 20

plasma membrane

ion transport

sodium ion transport

amino acid transport

symporter activity

integral to membrane

sodium ion binding

 
226080_at -0.907 8.766 -2.991 9.024e-03 0.213 -2.588 SSH2 slingshot homolog 2 (Drosophila) 17 -24977090 BE676214 17q11.2 Hs.654754 11

actin binding

protein tyrosine phosphatase activity

cytoplasm

cytoskeleton

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

actin cytoskeleton organization

Regulation of actin cytoskeleton

224755_at -0.365 7.152 -2.991 9.025e-03 0.213 -2.588 TM9SF3 transmembrane 9 superfamily member 3 10 -98267856 BE621524 10q24.1 Hs.500674 5

binding

membrane

integral to membrane

 
234195_at 0.283 5.146 2.991 9.029e-03 0.213 -2.588 TNFRSF10C tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain 8 23016378 AK026079 8p22-p21 Hs.655801 43

transmembrane receptor activity

plasma membrane

integral to plasma membrane

apoptosis

signal transduction

anchored to membrane

Cytokine-cytokine receptor interaction

Apoptosis

Natural killer cell mediated cytotoxicity

230484_at 0.237 5.199 2.991 9.031e-03 0.213 -2.589 CHDH choline dehydrogenase 3 -53825427 AI741739 3p21.1 Hs.126688 5

mitochondrion

mitochondrial inner membrane

alcohol metabolic process

choline dehydrogenase activity

FAD binding

oxidation reduction

Glycine, serine and threonine metabolism

208826_x_at -0.313 10.976 -2.991 9.034e-03 0.213 -2.589 HINT1 histidine triad nucleotide binding protein 1 5 -130522773, -130522773 U27143 5q31.2 Hs.483305 26

protein kinase C binding

nucleus

cytoplasm

cytoskeleton

signal transduction

hydrolase activity

 
238560_at 0.302 6.005 2.990 9.047e-03 0.213 -2.590 CALCOCO2 calcium binding and coiled-coil domain 2 17 44263370 AI684710 17q21.32 Hs.514920 11

protein binding

soluble fraction

nucleus

cytoplasm

Golgi apparatus

cytoskeleton

viral reproduction

response to interferon-gamma

protein homodimerization activity

perinuclear region of cytoplasm

 
226214_at -0.489 8.802 -2.989 9.061e-03 0.213 -2.592 GDE1 glycerophosphodiester phosphodiesterase 1 16 -19420515 BE677894 16p12-p11.2 Hs.512607 8

magnesium ion binding

cytoplasm

glycerol metabolic process

lipid metabolic process

glycerophosphodiester phosphodiesterase activity

membrane

integral to membrane

hydrolase activity

glycerophosphoinositol glycerophosphodiesterase activity

Glycerophospholipid metabolism

227080_at -0.537 5.638 -2.988 9.076e-03 0.214 -2.593 ZNF697 zinc finger protein 697 1 -119963522 AW003092 1p12 Hs.381105 Hs.711175 1

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
201384_s_at -0.468 8.599 -2.988 9.082e-03 0.214 -2.594 NBR1 neighbor of BRCA1 gene 1 17 38576023, 38576036, 38576771 NM_005899 17q21.31 Hs.277721 Hs.373818 Hs.546264 Hs.708158 16

zinc ion binding

metal ion binding

 
1562337_at -0.656 4.318 -2.987 9.096e-03 0.214 -2.595 OR7D2 olfactory receptor, family 7, subfamily D, member 2 19 9157269 AK095468 19p13.2 Hs.531755 4

receptor activity

olfactory receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

sensory perception of smell

integral to membrane

response to stimulus

Olfactory transduction

226221_at -0.571 6.172 -2.987 9.100e-03 0.214 -2.595 KIAA1432 KIAA1432 9 5619326, 5646582 AL138104 9p24.1 Hs.211520 5

membrane

integral to membrane

 
237044_s_at 0.442 5.463 2.987 9.101e-03 0.214 -2.596 C10orf41 chromosome 10 open reading frame 41 10 76831291, 76833519 AI480142 10q22.2 Hs.534598 Hs.599628 4    
223000_s_at 0.498 6.332 2.986 9.117e-03 0.214 -2.597 F11R F11 receptor 1 -159231624 AF172398 1q21.2-q21.3 Hs.517293 63

protein binding

plasma membrane

cell-cell junction

tight junction

inflammatory response

cell adhesion

integral to membrane

epithelial cell differentiation

interspecies interaction between organisms

Cell adhesion molecules (CAMs)

Tight junction

Leukocyte transendothelial migration

Epithelial cell signaling in Helicobacter pylori infection

224355_s_at 0.555 5.409 2.986 9.123e-03 0.214 -2.598 MS4A8B membrane-spanning 4-domains, subfamily A, member 8B 11 60223622 AF237905 11q12.2 Hs.150878 5

receptor activity

signal transduction

membrane

integral to membrane

 
1552848_a_at 0.425 4.164 2.985 9.136e-03 0.214 -2.599 PTCHD1 patched domain containing 1 X 23262905 NM_173495 Xp22.11 Hs.319503 2

hedgehog receptor activity

membrane

integral to membrane

 
235848_x_at -0.758 8.032 -2.985 9.145e-03 0.214 -2.600 ATL2 atlastin GTPase 2 2 -38375534 N35250 2p22.2-p22.1 Hs.594950 8

nucleotide binding

GTPase activity

GTP binding

membrane

integral to membrane

 
201672_s_at -0.418 9.677 -2.984 9.153e-03 0.214 -2.601 USP14 ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) 18 148482 NM_005151 18p11.32 Hs.464416 Hs.707058 15

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

cytoplasm

ubiquitin-dependent protein catabolic process

tRNA guanylyltransferase activity

peptidase activity

 
227413_at -0.465 5.646 -2.983 9.168e-03 0.214 -2.602 UBLCP1 ubiquitin-like domain containing CTD phosphatase 1 5 158622666 BF965546 5q33.3 Hs.591733 7

phosphoprotein phosphatase activity

nucleus

hydrolase activity

 
226784_at -0.366 5.732 -2.983 9.169e-03 0.214 -2.602 TWISTNB TWIST neighbor 7 -19701609 AA121481 7p21.1 Hs.353035 5

DNA-directed RNA polymerase activity

nucleus

nucleolus

transcription

 
225113_at -0.642 6.104 -2.983 9.173e-03 0.214 -2.603 AGPS alkylglycerone phosphate synthase 2 177965716 BF688144 2q31.2 Hs.516543 19

peroxisome

peroxisomal membrane

cytosol

alkylglycerone-phosphate synthase activity

lipid biosynthetic process

membrane

oxidoreductase activity

transferase activity

FAD binding

Ether lipid metabolism

Metabolic pathways

209392_at 0.940 6.341 2.983 9.179e-03 0.214 -2.603 ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 8 -120638500, -120638499 L35594 8q24.1 Hs.190977 47

nucleic acid binding

phosphodiesterase I activity

nucleotide diphosphatase activity

extracellular region

plasma membrane

integral to plasma membrane

phosphate metabolic process

cell motion

chemotaxis

G-protein coupled receptor protein signaling pathway

transcription factor binding

metabolic process

lipid catabolic process

hydrolase activity

metal ion binding

alkylglycerophosphoethanolamine phosphodiesterase activity

Ether lipid metabolism

205414_s_at 0.569 4.890 2.983 9.179e-03 0.214 -2.603 RICH2 Rho-type GTPase-activating protein RICH2 17 12633553 NM_014859 17p12 Hs.499758 7

GTPase activator activity

protein binding

intracellular

cytoplasm

signal transduction

 
208458_at 0.331 5.337 2.982 9.196e-03 0.214 -2.605 SCNN1D sodium channel, nonvoltage-gated 1, delta 1 1207351, 1207438 NM_002978 1p36.3-p36.2 Hs.512681 16

ion channel activity

ion transport

sodium ion transport

amiloride-sensitive sodium channel activity

membrane

integral to membrane

sodium ion binding

response to stimulus

sensory perception of taste

 
222405_at 0.285 6.985 2.982 9.203e-03 0.214 -2.606 PTPLAD1 protein tyrosine phosphatase-like A domain containing 1 15 63609879 AL573951 15q22.2 Hs.512973 13

molecular_function

GTPase activator activity

protein binding

cellular_component

I-kappaB kinase/NF-kappaB cascade

activation of JUN kinase activity

small GTPase mediated signal transduction

Rho protein signal transduction

membrane

integral to membrane

Rac protein signal transduction

 
204725_s_at -0.510 7.380 -2.982 9.203e-03 0.214 -2.606 NCK1 NCK adaptor protein 1 3 138063762 NM_006153 3q21 Hs.477693 110

receptor binding

cytoplasm

endoplasmic reticulum

regulation of translation

actin filament organization

signal complex assembly

cytoskeletal adaptor activity

vesicle membrane

cell migration

protein domain specific binding

lamellipodium assembly

receptor signaling complex scaffold activity

positive regulation of actin filament polymerization

positive regulation of T cell proliferation

T cell activation

ErbB signaling pathway

Axon guidance

T cell receptor signaling pathway

Pathogenic Escherichia coli infection - EHEC

223355_at -0.294 4.114 -2.981 9.205e-03 0.214 -2.606 ALG1 asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae) 16 5061810 BC004402 16p13.3 Hs.592086 9

chitobiosyldiphosphodolichol beta-mannosyltransferase activity

endoplasmic reticulum

protein amino acid glycosylation

biosynthetic process

lipopolysaccharide biosynthetic process

membrane

integral to membrane

transferase activity, transferring glycosyl groups

N-Glycan biosynthesis

Metabolic pathways

238462_at -0.508 2.700 -2.981 9.211e-03 0.214 -2.606 UBASH3B ubiquitin associated and SH3 domain containing, B 11 122031607 AI418293 11q24.1 Hs.444075 15

nucleus

cytoplasm

 
210867_at -0.464 5.238 -2.980 9.225e-03 0.215 -2.608 CNOT4 CCR4-NOT transcription complex, subunit 4 7 -134723303, -134697088 AF180475 7q22-qter Hs.490224 7

nucleotide binding

RNA binding

protein binding

nucleus

cytoplasm

zinc ion binding

ligase activity

modification-dependent protein catabolic process

regulation of transcription

metal ion binding

RNA degradation

200671_s_at -0.483 5.770 -2.979 9.253e-03 0.215 -2.611 SPTBN1 spectrin, beta, non-erythrocytic 1 2 54536957, 54639034 N92501 2p21 Hs.503178 Hs.705692 46

actin binding

structural constituent of cytoskeleton

calmodulin binding

nucleus

nucleolus

cytoplasm

plasma membrane

common-partner SMAD protein phosphorylation

SMAD protein nuclear translocation

spectrin

cortical cytoskeleton

M band

actin filament capping

 
221030_s_at -0.650 5.403 -2.979 9.256e-03 0.215 -2.611 ARHGAP24 Rho GTPase activating protein 24 4 86615307, 86918874, 87070449 NM_031305 4q21.23-q21.3 Hs.444229 14

angiogenesis

GTPase activator activity

protein binding

intracellular

cytoplasm

cytoskeleton

adherens junction

focal adhesion

signal transduction

multicellular organismal development

cell junction

cell differentiation

cell projection

 
201574_at -0.454 8.905 -2.978 9.269e-03 0.215 -2.612 ETF1 eukaryotic translation termination factor 1 5 -137869682 NM_004730 5q31.1 Hs.483494 32

RNA binding

protein binding

cytoplasm

regulation of translational termination

protein amino acid methylation

translation release factor activity, codon specific

ribosome binding

 
232349_x_at -0.618 9.489 -2.977 9.280e-03 0.215 -2.613 DCAF6 DDB1 and CUL4 associated factor 6 1 166172531 BF671187 1q24.2 Hs.435741 10

nucleus

ligand-dependent nuclear receptor transcription coactivator activity

 
211151_x_at 0.335 4.464 2.977 9.285e-03 0.215 -2.614 GH1 growth hormone 1 17 -59348294 AF185611 17q24.2 Hs.655229 227

positive regulation of receptor internalization

growth hormone receptor binding

prolactin receptor binding

protein binding

extracellular region

extracellular space

growth factor activity

positive regulation of activation of JAK2 kinase activity

positive regulation of phosphoinositide 3-kinase cascade

glucose transport

response to estradiol stimulus

positive regulation of multicellular organism growth

positive regulation of multicellular organism growth

positive regulation of tyrosine phosphorylation of Stat3 protein

positive regulation of tyrosine phosphorylation of Stat5 protein

positive regulation of MAP kinase activity

positive regulation of insulin-like growth factor receptor signaling pathway

positive regulation of JAK-STAT cascade

positive regulation of peptidyl-tyrosine phosphorylation

growth hormone receptor signaling pathway

growth hormone activity

Cytokine-cytokine receptor interaction

Neuroactive ligand-receptor interaction

Jak-STAT signaling pathway

1562511_at -0.272 3.483 -2.977 9.293e-03 0.216 -2.615 LYST lysosomal trafficking regulator 1 -233890968 AL833100 1q42.1-q42.2 Hs.532411 23

protein binding

cytoplasm

protein transport

microtubule cytoskeleton

leukocyte chemotaxis

melanosome organization

endosome to lysosome transport via multivesicular body sorting pathway

mast cell secretory granule organization

natural killer cell mediated cytotoxicity

defense response to bacterium

defense response to protozoan

pigmentation

defense response to virus

 
239218_at 0.510 3.355 2.977 9.295e-03 0.216 -2.615 PDE1C phosphodiesterase 1C, calmodulin-dependent 70kDa 7 -31795771 AI800515 7p14.3 Hs.655694 10

calmodulin-dependent cyclic-nucleotide phosphodiesterase activity

calmodulin binding

signal transduction

hydrolase activity

Purine metabolism

Calcium signaling pathway

Olfactory transduction

221932_s_at 0.419 10.590 2.976 9.302e-03 0.216 -2.615 GLRX5 glutaredoxin 5 14 95071075 AA133341 14q32.13 Hs.532683 Hs.719204 5

mitochondrion

electron carrier activity

protein disulfide oxidoreductase activity

cell redox homeostasis

 
205148_s_at -0.707 6.344 -2.976 9.314e-03 0.216 -2.617 CLCN4 chloride channel 4 X 10084984 AA071195 Xp22.3 Hs.495674 17

nucleotide binding

ion channel activity

voltage-gated chloride channel activity

ATP binding

endosome

ion transport

chloride transport

antiporter activity

membrane

integral to membrane

chloride ion binding

 
216125_s_at -0.918 5.549 -2.975 9.321e-03 0.216 -2.617 RANBP9 RAN binding protein 9 6 -13729708 AF064606 6p23 Hs.708182 37

nucleus

cytoplasm

microtubule associated complex

protein complex assembly

microtubule nucleation

Ran GTPase binding

enzyme binding

 
230359_at 0.301 5.518 2.975 9.324e-03 0.216 -2.618 KNDC1 kinase non-catalytic C-lobe domain (KIND) containing 1 10 134823960 N45097 10q26.3 Hs.530685 3

molecular_function

guanyl-nucleotide exchange factor activity

cellular_component

intracellular

biological_process

regulation of small GTPase mediated signal transduction

 
218813_s_at -0.493 5.345 -2.975 9.329e-03 0.216 -2.618 SH3GLB2 SH3-domain GRB2-like endophilin B2 9 -130810133 NM_020145 9q34 Hs.460238 13

protein binding

nucleus

nucleolus

cytoplasm

Endocytosis

205210_at -0.298 5.527 -2.974 9.337e-03 0.216 -2.619 TGFBRAP1 transforming growth factor, beta receptor associated protein 1 2 -105249973 NM_004257 2q12.1 Hs.446350 7

transforming growth factor beta receptor binding

cytoplasm

signal transduction

transforming growth factor beta receptor signaling pathway

membrane

regulation of transcription

SMAD binding

 
202811_at -0.415 8.074 -2.974 9.339e-03 0.216 -2.619 STAMBP STAM binding protein 2 73909593, 73909634, 73909654 NM_006463 2p13.1 Hs.469018 Hs.657598 28

ubiquitin thiolesterase activity

protein binding

nucleus

cytoplasm

early endosome

anti-apoptosis

JAK-STAT cascade

peptidase activity

metallopeptidase activity

zinc ion binding

positive regulation of cell proliferation

membrane

modification-dependent protein catabolic process

metal ion binding

Endocytosis

200812_at -0.322 9.517 -2.974 9.347e-03 0.216 -2.620 CCT7 chaperonin containing TCP1, subunit 7 (eta) 2 73314912 NM_006429 2p13.2 Hs.368149 18

nucleotide binding

ATP binding

cytoplasm

protein folding

unfolded protein binding

 
220816_at 0.388 5.461 2.973 9.357e-03 0.216 -2.621 LPAR3 lysophosphatidic acid receptor 3 1 -85051673 NM_012152 1p22.3 Hs.674915 19

activation of MAPK activity

lysosphingolipid and lysophosphatidic acid receptor activity

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein signaling, coupled to cyclic nucleotide second messenger

elevation of cytosolic calcium ion concentration

synaptic transmission

lipid binding

bleb formation

positive regulation of MAPKKK cascade

Neuroactive ligand-receptor interaction

201339_s_at -0.384 8.737 -2.973 9.357e-03 0.216 -2.621 SCP2 sterol carrier protein 2 1 53165535, 53165535, 53253197 NM_002979 1p32 Hs.476365 Hs.709369 36

sterol carrier activity

protein binding

cytoplasm

mitochondrion

peroxisome

steroid biosynthetic process

lipid transport

metabolic process

lipid binding

oxidoreductase activity

transferase activity

propanoyl-CoA C-acyltransferase activity

Primary bile acid biosynthesis

Metabolic pathways

PPAR signaling pathway

230143_at 0.675 5.047 2.973 9.360e-03 0.216 -2.621 RNF165 ring finger protein 165 18 42168184 BF433220 18q21.1 Hs.501114 4

protein binding

zinc ion binding

metal ion binding

 
201361_at -0.347 7.562 -2.973 9.361e-03 0.216 -2.621 TMEM109 transmembrane protein 109 11 60437946 NM_024092 11q12.2 Hs.13662 5

molecular_function

cellular_component

nucleus

nucleolus

cytoplasm

biological_process

membrane

integral to membrane

sarcoplasmic reticulum

nuclear membrane

 
235344_at -0.724 6.993 -2.973 9.363e-03 0.216 -2.621 PPM1A protein phosphatase 1A (formerly 2C), magnesium-dependent, alpha isoform 14 59782222, 59785718, 59785718 BG288054 14q23.1 Hs.130036 28

magnesium ion binding

protein serine/threonine phosphatase activity

signal transducer activity

cellular_component

membrane fraction

voltage-gated calcium channel complex

protein amino acid dephosphorylation

protein C-terminus binding

protein serine/threonine phosphatase complex

hydrolase activity

manganese ion binding

positive regulation of Wnt receptor signaling pathway

neuron projection

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of transcription, DNA-dependent

MAPK signaling pathway

209311_at -0.392 6.931 -2.973 9.368e-03 0.216 -2.622 BCL2L2 BCL2-like 2 14 22845851 D87461 14q11.2-q12 Hs.410026 31

protein binding

mitochondrion

cytosol

anti-apoptosis

spermatogenesis

membrane

mitochondrial membrane

regulation of apoptosis

Sertoli cell proliferation

 
200914_x_at -0.583 10.569 -2.973 9.371e-03 0.216 -2.622 KTN1 kinectin 1 (kinesin receptor) 14 55116677, 55116677 BF589024 14q22.1 Hs.509414 30

molecular_function

membrane fraction

endoplasmic reticulum

endoplasmic reticulum membrane

integral to plasma membrane

microtubule-based movement

membrane

 
201066_at 0.353 11.243 2.972 9.378e-03 0.216 -2.623 CYC1 cytochrome c-1 8 145221947 NM_001916 8q24.3 Hs.289271 23

mitochondrion

mitochondrial inner membrane

transport

membrane

integral to membrane

heme binding

electron transport chain

electron transporter, transferring electrons from CoQH2-cytochrome c reductase complex and cytochrome c oxidase complex activity

metal ion binding

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Cardiac muscle contraction

Alzheimer's disease

Parkinson's disease

Huntington's disease

219839_x_at 0.301 4.571 2.972 9.379e-03 0.216 -2.623 TCL6 T-cell leukemia/lymphoma 6 14 95187267, 95187267, 95199345, 95199345, 95199345 NM_012468 14q32.1 Hs.510368 4

molecular_function

cellular_component

biological_process

 
205391_x_at 0.491 11.171 2.972 9.383e-03 0.216 -2.623 ANK1 ankyrin 1, erythrocytic 8 -41629901, -41629901, -41629900 M28880 8p11.1 Hs.654438 Hs.667377 49

structural constituent of cytoskeleton

cytoplasm

plasma membrane

exocytosis

cytoskeleton organization

signal transduction

cytoskeletal adaptor activity

spectrin-associated cytoskeleton

basolateral plasma membrane

sarcoplasmic reticulum

enzyme binding

spectrin binding

M band

maintenance of epithelial cell apical/basal polarity

 
224394_at -0.473 4.431 -2.971 9.397e-03 0.216 -2.625 RNF7 ring finger protein 7 3 142939740 AF312226 3q22-q24 Hs.134623 25

copper ion binding

protein binding

nucleus

cytoplasm

anti-apoptosis

redox signal response

zinc ion binding

induction of apoptosis by oxidative stress

NEDD8 ligase activity

modification-dependent protein catabolic process

protein neddylation

metal ion binding

Ubiquitin mediated proteolysis

200009_at -0.476 9.430 -2.971 9.411e-03 0.216 -2.626 GDI2 GDP dissociation inhibitor 2 10 -5847191 NM_001494 10p15 Hs.299055 16

Rab GDP-dissociation inhibitor activity

GTPase activator activity

cytoplasm

signal transduction

cell surface

protein transport

membrane

regulation of GTPase activity

 
225182_at -0.683 8.054 -2.970 9.415e-03 0.216 -2.626 TMEM50B transmembrane protein 50B 21 -33743317 AL355685 21q22.11 Hs.433668 8

molecular_function

endoplasmic reticulum

plasma membrane

biological_process

integral to membrane

 
208055_s_at -0.317 3.864 -2.970 9.416e-03 0.216 -2.626 HERC4 hect domain and RLD 4 10 -69351661 NM_015601 10q21.3 Hs.51891 7

intracellular

cytoplasm

cytosol

protein modification process

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

Ubiquitin mediated proteolysis

208557_at 0.466 5.361 2.970 9.421e-03 0.216 -2.627 HOXA6 homeobox A6 7 -27151640 NM_024014 7p15-p14 Hs.679517 12

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anterior/posterior pattern formation

sequence-specific DNA binding

embryonic skeletal system morphogenesis

 
202539_s_at -0.594 5.336 -2.970 9.423e-03 0.216 -2.627 HMGCR 3-hydroxy-3-methylglutaryl-Coenzyme A reductase 5 74668748 AL518627 5q13.3-q14 Hs.643495 Hs.698445 Hs.713530 72

hydroxymethylglutaryl-CoA reductase (NADPH) activity

peroxisome

endoplasmic reticulum

endoplasmic reticulum membrane

endoplasmic reticulum membrane

cholesterol biosynthetic process

isoprenoid biosynthetic process

germ cell migration

gonad development

coenzyme A metabolic process

membrane

integral to membrane

oxidoreductase activity

NADP or NADPH binding

oxidation reduction

Terpenoid backbone biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

235815_at 0.311 3.830 2.969 9.433e-03 0.216 -2.628 TSHZ2 teashirt zinc finger homeobox 2 20 51022283 BE222470 20q13.2 Hs.271605 Hs.473117 Hs.649877 6

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

sequence-specific DNA binding

metal ion binding

 
228067_at 0.577 5.292 2.969 9.437e-03 0.216 -2.628 C2orf55 chromosome 2 open reading frame 55 2 -98776740 AW249666 2q11.2 Hs.469398 1    
1560514_at 0.330 3.903 2.969 9.440e-03 0.216 -2.629 LOC285205 hypothetical LOC285205 3 109084741 BC039517 3q13.12 Hs.134882 2    
209503_s_at -0.378 9.753 -2.969 9.441e-03 0.216 -2.629 PSMC5 proteasome (prosome, macropain) 26S subunit, ATPase, 5 17 59258541 AF035309 17q23-q25 Hs.79387 71

nucleotide binding

proteasome complex

transcription cofactor activity

ATP binding

nucleus

nucleolus

cytoplasm

cytosol

transcription from RNA polymerase II promoter

hydrolase activity

ATPase activity

protein catabolic process

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

thyrotropin-releasing hormone receptor binding

negative regulation of programmed cell death

positive regulation of gene-specific transcription

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

1557821_at 0.254 3.139 2.969 9.450e-03 0.216 -2.630 LOC283547 hypothetical protein LOC283547 14   BC035119 14q21.1 Hs.675941 1    
201238_s_at -0.646 10.394 -2.968 9.457e-03 0.216 -2.630 CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 7 116289798 BC005338 7q31.2-q31.3 Hs.446123 14

actin binding

protein binding

protein complex assembly

cell motion

F-actin capping protein complex

actin cytoskeleton organization

actin filament capping

 
211086_x_at 0.270 3.870 2.968 9.462e-03 0.216 -2.631 NEK1 NIMA (never in mitosis gene a)-related kinase 1 4 -170551003 Z25431 4q33 Hs.481181 11

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

cell cycle

mitosis

transferase activity

cell division

 
226106_at -0.547 8.884 -2.968 9.462e-03 0.216 -2.631 RNF141 ring finger protein 141 11 -10489800 AI307808 11p15.4 Hs.44685 7

DNA binding

protein binding

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
207862_at 0.303 3.791 2.968 9.464e-03 0.216 -2.631 UPK2 uroplakin 2 11 118332235 NM_006760 11q23 Hs.710330 14

plasma membrane

integral to plasma membrane

multicellular organismal development

membrane organization

integral to endoplasmic reticulum membrane

epithelial cell differentiation

 
209905_at 0.538 7.543 2.968 9.469e-03 0.216 -2.632 HOXA9 homeobox A9 7 -27168581 AI246769 7p15-p14 Hs.659350 63

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

transcription activator activity

sequence-specific DNA binding

 
211548_s_at -0.581 5.023 -2.967 9.471e-03 0.216 -2.632 HPGD hydroxyprostaglandin dehydrogenase 15-(NAD) 4 -175647902, -175647902 J05594 4q34-q35 Hs.596913 47

prostaglandin E receptor activity

binding

nucleus

nucleolus

cytoplasm

cytosol

lipid metabolic process

fatty acid metabolic process

prostaglandin metabolic process

transforming growth factor beta receptor signaling pathway

female pregnancy

parturition

15-hydroxyprostaglandin dehydrogenase (NAD+) activity

oxidoreductase activity

lipoxygenase pathway

protein homodimerization activity

negative regulation of cell cycle

NAD or NADH binding

oxidation reduction

 
1555976_s_at -0.979 6.343 -2.967 9.486e-03 0.216 -2.633 MYL12A myosin, light chain 12A, regulatory, non-sarcomeric 18 3237527 BU676221 18p11.31 Hs.190086 9

motor activity

calcium ion binding

protein binding

myosin complex

Focal adhesion

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

217148_x_at 0.696 5.646 2.967 9.489e-03 0.216 -2.633 IGL@ immunoglobulin lambda locus 22   AJ249377 22q11.1-q11.2 Hs.449585 Hs.561078 20    
1559293_x_at 0.337 3.805 2.966 9.498e-03 0.216 -2.634 NCRNA00032 non-protein coding RNA 32 9 -27235683 AF507950 9p21 Hs.201554 1    
218455_at 0.477 6.681 2.966 9.500e-03 0.216 -2.635 NFS1 NFS1 nitrogen fixation 1 homolog (S. cerevisiae) 20 -33720024 NM_021100 20q11.22 Hs.194692 14

protein binding

nucleus

cytoplasm

mitochondrion

mitochondrial matrix

cytosol

protein complex assembly

cysteine metabolic process

Mo-molybdopterin cofactor biosynthetic process

metabolic process

transferase activity

iron incorporation into metallo-sulfur cluster

pyridoxal phosphate binding

cysteine desulfurase activity

protein homodimerization activity

Thiamine metabolism

206158_s_at -0.449 11.893 -2.965 9.519e-03 0.217 -2.636 CNBP CCHC-type zinc finger, nucleic acid binding protein 3 -130369347 NM_003418 3q21 Hs.518249 24

transcription factor activity

protein binding

cytoplasm

endoplasmic reticulum

regulation of transcription, DNA-dependent

cholesterol biosynthetic process

zinc ion binding

metal ion binding

 
208373_s_at 0.325 5.275 2.965 9.522e-03 0.217 -2.637 P2RY6 pyrimidinergic receptor P2Y, G-protein coupled, 6 11 72653217, 72658586, 72660894 NM_004154 11q13.5 Hs.16362 23

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

signal transduction

activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger

transepithelial chloride transport

purinergic nucleotide receptor activity, G-protein coupled

UDP-activated nucleotide receptor activity

Neuroactive ligand-receptor interaction

218744_s_at -0.604 8.410 -2.965 9.523e-03 0.217 -2.637 PACSIN3 protein kinase C and casein kinase substrate in neurons 3 11 -47155656 NM_016223 11p12-p11.12 Hs.334639 14

cytoplasm

plasma membrane

cytoskeletal protein binding

negative regulation of endocytosis

positive regulation of membrane protein ectodomain proteolysis

 
228748_at -0.709 6.728 -2.964 9.549e-03 0.217 -2.639 CD59 CD59 molecule, complement regulatory protein 11 -33681131, -33681131, -33681131 AI653117 11p13 Hs.278573 Hs.709466 Hs.710641 107

protein binding

extracellular region

membrane fraction

plasma membrane

cell surface receptor linked signal transduction

blood coagulation

anchored to membrane

anchored to external side of plasma membrane

Complement and coagulation cascades

Hematopoietic cell lineage

37170_at -0.449 3.934 -2.963 9.554e-03 0.217 -2.640 BMP2K BMP2 inducible kinase 4 79916555, 79916555 AB015331 4q21.21 Hs.146551 11

nucleotide binding

protein serine/threonine kinase activity

ATP binding

nucleus

protein amino acid phosphorylation

transferase activity

 
203008_x_at -0.476 7.997 -2.962 9.576e-03 0.217 -2.642 TXNDC9 thioredoxin domain containing 9 2 -99301918 NM_005783 2q11.2 Hs.536122 8

protein binding

cellular_component

biological_process

 
219036_at -0.377 6.139 -2.962 9.577e-03 0.217 -2.642 CEP70 centrosomal protein 70kDa 3 -139695876 NM_024491 3q22-q23 Hs.531962 9

protein binding

centrosome

 
205437_at 0.579 5.822 2.962 9.578e-03 0.217 -2.642 ZNF211 zinc finger protein 211 19 62836346 NM_006385 19q13.4 Hs.590977 4

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
203885_at -0.592 8.739 -2.962 9.580e-03 0.217 -2.642 RAB21 RAB21, member RAS oncogene family 12 70434924 NM_014999 12q21.1 Hs.524590 12

Golgi membrane

nucleotide binding

protein binding

GTP binding

endosome

endoplasmic reticulum

Golgi apparatus

small GTPase mediated signal transduction

protein transport

membrane

cytoplasmic vesicle membrane

cytoplasmic vesicle

early endosome membrane

 
233878_s_at -0.490 5.234 -2.962 9.582e-03 0.217 -2.642 XRN2 5'-3' exoribonuclease 2 20 21231941 BE536170 20p11.2-p11.1 Hs.255932 18

DNA catabolic process, exonucleolytic

nucleic acid binding

5'-3' exoribonuclease activity

protein binding

intracellular

nucleus

nucleolus

transcription termination

mRNA processing

RNA catabolic process

spermatogenesis

zinc ion binding

cell growth

hydrolase activity

regulation of transcription

metal ion binding

RNA degradation

224922_at -0.403 5.925 -2.962 9.587e-03 0.217 -2.643 CSNK2A2 casein kinase 2, alpha prime polypeptide 16 -56749312 AI022089 16q21 Hs.82201 143

nucleotide binding

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

Wnt receptor signaling pathway

transferase activity

protein N-terminus binding

regulation of cell cycle

Wnt signaling pathway

Adherens junction

Tight junction

218029_at 0.314 6.302 2.961 9.601e-03 0.217 -2.644 FAM65A family with sequence similarity 65, member A 16 66120254 NM_024519 16q22.1 Hs.152717 5

binding

 
1558028_x_at -1.059 5.884 -2.961 9.603e-03 0.217 -2.644 LOC647979 hypothetical LOC647979 20 -34096955 BI857154 20q11.23 Hs.649310 Hs.718413 2    
204779_s_at 0.521 4.610 2.961 9.603e-03 0.217 -2.644 HOXB7 homeobox B7 17 -44039593 NM_004502 17q21.3 Hs.436181 39

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anterior/posterior pattern formation

myeloid cell differentiation

sequence-specific DNA binding

embryonic skeletal system morphogenesis

 
210251_s_at -0.685 5.534 -2.960 9.609e-03 0.217 -2.645 RUFY3 RUN and FYVE domain containing 3 4 71789517, 71806559, 71806559 AF112221 4q13.3 Hs.713172 8

multicellular organismal development

nervous system development

cell differentiation

filopodium

growth cone

negative regulation of axonogenesis

 
231666_at -0.771 5.277 -2.960 9.623e-03 0.217 -2.646 PAX3 paired box 3 2 -222866592, -222774675, -222772850 AA194168 2q35 2q35-q37 Hs.42146 103

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

apoptosis

multicellular organismal development

sensory perception of sound

organ morphogenesis

sequence-specific DNA binding

 
242224_at -0.340 3.122 -2.960 9.625e-03 0.217 -2.646 GPATCH2 G patch domain containing 2 1 -215670456 R40111 1q41 Hs.420757 6

nucleic acid binding

intracellular

 
228346_at 0.671 6.290 2.959 9.632e-03 0.217 -2.647 ZNF844 zinc finger protein 844 19 12036545 H47630 19p13.2 Hs.646391 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
222399_s_at -0.625 7.381 -2.959 9.636e-03 0.217 -2.647 TM9SF3 transmembrane 9 superfamily member 3 10 -98267856 BG104571 10q24.1 Hs.500674 5

binding

membrane

integral to membrane

 
241512_at 0.254 4.463 2.959 9.637e-03 0.217 -2.647 SPATC1 spermatogenesis and centriole associated 1 8 145158569 AI026805 8q24.3 Hs.97726 3

cytoplasm

centrosome

 
214876_s_at -0.550 4.951 -2.959 9.637e-03 0.217 -2.647 TUBGCP5 tubulin, gamma complex associated protein 5 15 20384835, 20384835 AI628925 15q11.2 Hs.533898 9

spindle pole

centrosome

microtubule

microtubule nucleation

microtubule binding

gamma-tubulin ring complex

 
209234_at -1.312 7.572 -2.959 9.643e-03 0.217 -2.648 KIF1B kinesin family member 1B 1 10193350, 10193350 BF939474 1p36.2 Hs.97858 33

nucleotide binding

microtubule motor activity

protein binding

ATP binding

cytoplasm

mitochondrion

cytoskeleton

microtubule

microtubule associated complex

microtubule-based movement

nerve-nerve synaptic transmission

neuromuscular synaptic transmission

anterograde axon cargo transport

ATPase activity

kinesin binding

cytoplasmic vesicle membrane

cytoskeleton-dependent intracellular transport

cytoplasmic vesicle

 
226992_at 0.675 5.455 2.959 9.646e-03 0.217 -2.648 NOSTRIN nitric oxide synthase trafficker 2 169367352, 169367398 AK002203 2q24.3-q31.1 Hs.189780 9

protein binding

cytoplasm

cytoskeleton

plasma membrane

plasma membrane

endocytosis

cytoplasmic vesicle

 
219640_at 0.356 7.546 2.958 9.650e-03 0.217 -2.649 CLDN15 claudin 15 7 -100662093 NM_014343 7q11.22 Hs.38738 11

structural molecule activity

plasma membrane

tight junction

integral to membrane

calcium-independent cell-cell adhesion

cell junction

identical protein binding

Cell adhesion molecules (CAMs)

Tight junction

Leukocyte transendothelial migration

225911_at 1.056 4.528 2.958 9.660e-03 0.217 -2.650 NPNT nephronectin 4 107036053 AL138410 4q24 Hs.518921 5

calcium ion binding

protein binding

extracellular region

proteinaceous extracellular matrix

cell adhesion

multicellular organismal development

membrane

cell differentiation

 
203399_x_at 0.333 3.589 2.958 9.665e-03 0.217 -2.650 PSG3 pregnancy specific beta-1-glycoprotein 3 19 -47917633 NM_021016 19q13.2 Hs.654413 13

extracellular region

defense response

female pregnancy

 
210652_s_at 0.735 4.608 2.957 9.672e-03 0.217 -2.651 TTC39A tetratricopeptide repeat domain 39A 1 -51525518, -51525518 BC004399 1p32.3 Hs.112949 3

binding

cellular_component

biological_process

 
217609_at 0.396 4.405 2.957 9.674e-03 0.217 -2.651 LRRC23 leucine rich repeat containing 23 12 6884157 BG420747 12p13 Hs.155586 10

molecular_function

protein binding

cellular_component

biological_process

 
1554015_a_at -0.461 4.832 -2.957 9.676e-03 0.217 -2.651 CHD2 chromodomain helicase DNA binding protein 2 15 91244554, 91244554 BC007347 15q26 Hs.220864 9

nucleotide binding

chromatin

DNA binding

chromatin binding

ATP-dependent DNA helicase activity

helicase activity

ATP binding

nucleus

chromatin assembly or disassembly

regulation of transcription from RNA polymerase II promoter

hydrolase activity

 
208731_at -0.653 9.818 -2.956 9.690e-03 0.217 -2.653 RAB2A RAB2A, member RAS oncogene family 8 61592112 AU158062 8q12.1 Hs.369017 19

nucleotide binding

GTPase activity

GTP binding

endoplasmic reticulum

Golgi apparatus

ER to Golgi vesicle-mediated transport

small GTPase mediated signal transduction

protein transport

membrane

vesicle-mediated transport

melanosome

 
213599_at -0.826 6.367 -2.956 9.699e-03 0.217 -2.653 OIP5 Opa interacting protein 5 15 -39388757 BE045993 15q15.1 Hs.661645 6

chromosome, centromeric region

chromatin

protein binding

cellular_component

nucleus

cell cycle

mitosis

cell communication

chromocenter

Cajal body

cell division

 
227862_at 0.557 5.362 2.956 9.701e-03 0.217 -2.653 TRNP1 TMF1-regulated nuclear protein 1 1 27192781 AA037766 1p36.11 Hs.355747 2

nucleus

cell cycle

 
211327_x_at 0.360 4.844 2.955 9.714e-03 0.217 -2.655 HFE hemochromatosis 6 26195487 AF149804 6p21.3 Hs.233325 592

antigen processing and presentation of peptide antigen via MHC class I

iron ion binding

protein binding

cytoplasm

early endosome

plasma membrane

integral to plasma membrane

protein complex assembly

ion transport

iron ion transport

cellular iron ion homeostasis

receptor-mediated endocytosis

immune response

antigen processing and presentation

cytoplasmic vesicle

MHC class I protein complex

apical part of cell

basal part of cell

perinuclear region of cytoplasm

recycling endosome

 
235180_at -0.273 2.966 -2.955 9.718e-03 0.217 -2.655 STYX serine/threonine/tyrosine interacting protein 14 52266632 AI492892   Hs.364980 8

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

 
208815_x_at -0.436 7.873 -2.955 9.726e-03 0.217 -2.656 HSPA4 heat shock 70kDa protein 4 5 132415560 AB023420 5q31.1-q31.2 Hs.90093 108

nucleotide binding

ATP binding

nucleus

cytoplasm

response to unfolded protein

cellular chaperone-mediated protein complex assembly

mitochondrial outer membrane translocase complex assembly

Antigen processing and presentation

1553600_at 0.307 4.617 2.954 9.726e-03 0.217 -2.656 TMIE transmembrane inner ear 3 46717826 NM_147196 3p21 Hs.185777 10

sensory perception of sound

membrane

integral to membrane

inner ear morphogenesis

 
210210_at 0.293 6.120 2.954 9.730e-03 0.217 -2.656 MPZL1 myelin protein zero-like 1 1 165957810 AF181660 1q24.2 Hs.493919 Hs.603116 19

structural molecule activity

protein binding

integral to plasma membrane

transmembrane receptor protein tyrosine kinase signaling pathway

cell-cell signaling

membrane

Cell adhesion molecules (CAMs)

226921_at -0.667 8.092 -2.954 9.733e-03 0.217 -2.657 UBR1 ubiquitin protein ligase E3 component n-recognin 1 15 -41022389 AV715153 15q13 Hs.591121 21

ubiquitin ligase complex

proteasome complex

ubiquitin-protein ligase activity

protein binding

cytoplasm

cytosol

ubiquitin-dependent protein catabolic process

zinc ion binding

ligase activity

protein catabolic process

metal ion binding

 
201305_x_at -0.592 8.368 -2.954 9.735e-03 0.217 -2.657 ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 9 99785309 AV712577 9q22.32 Hs.715547 16

protein binding

nucleus

 
1558251_a_at 0.361 3.079 2.953 9.748e-03 0.217 -2.658 ZNF587 zinc finger protein 587 19 63053080 AK055448 19q13.43 Hs.642598 Hs.715493 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
209066_x_at 0.290 11.943 2.953 9.750e-03 0.217 -2.658 UQCRB ubiquinol-cytochrome c reductase binding protein 8 -97308479 M26700 8q22 Hs.131255 10

mitochondrion

mitochondrial respiratory chain

oxidative phosphorylation

mitochondrial electron transport, ubiquinol to cytochrome c

transport

ubiquinol-cytochrome-c reductase activity

aerobic respiration

membrane

electron transport chain

Oxidative phosphorylation

Metabolic pathways

Cardiac muscle contraction

Alzheimer's disease

Parkinson's disease

Huntington's disease

207164_s_at -0.559 3.944 -2.953 9.765e-03 0.217 -2.659 ZNF238 zinc finger protein 238 1 242281183, 242283204 NM_006352 1q44-qter Hs.69997 11

negative regulation of transcription from RNA polymerase II promoter

nuclear chromosome

transcription factor activity

protein binding

intracellular

nucleus

transport

zinc ion binding

regulation of transcription

metal ion binding

 
201222_s_at -0.517 8.610 -2.952 9.766e-03 0.217 -2.660 RAD23B RAD23 homolog B (S. cerevisiae) 9 109085364 AL527365 9q31.2 Hs.521640 54

nucleotide-excision repair, DNA damage removal

damaged DNA binding

single-stranded DNA binding

protein binding

nucleus

nucleoplasm

cytoplasm

cytosol

response to DNA damage stimulus

modification-dependent protein catabolic process

proteasomal ubiquitin-dependent protein catabolic process

protein complex

Nucleotide excision repair

222439_s_at -0.694 7.555 -2.952 9.769e-03 0.217 -2.660 THRAP3 thyroid hormone receptor associated protein 3 1 36462603 BE967048 1p34.3 Hs.160211 21

nucleotide binding

receptor activity

protein binding

ATP binding

nucleus

nucleolus

transcription initiation from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

ligand-dependent nuclear receptor transcription coactivator activity

androgen receptor signaling pathway

vitamin D receptor binding

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

thyroid hormone receptor binding

 
206050_s_at -0.390 7.701 -2.952 9.769e-03 0.217 -2.660 RNH1 ribonuclease/angiogenin inhibitor 1 11 -484511, -484511 NM_002939 11p15.5 Hs.530687 23

protein binding

cytoplasm

mRNA catabolic process

ribonuclease inhibitor activity

angiogenin-PRI complex

regulation of angiogenesis

 
212266_s_at -0.382 8.004 -2.952 9.784e-03 0.218 -2.661 SFRS5 splicing factor, arginine/serine-rich 5 14 69303581, 69303586 AW084582 14q24 Hs.632326 28

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

mRNA splice site selection

RNA splicing

RS domain binding

 
200698_at -0.400 6.621 -2.951 9.789e-03 0.218 -2.662 KDELR2 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 7 -6467236 AL542253 7p22.1 Hs.654552 Hs.705873 12

receptor activity

KDEL sequence binding

protein binding

endoplasmic reticulum

Golgi apparatus

protein retention in ER lumen

intracellular protein transport

membrane

integral to membrane

vesicle-mediated transport

Vibrio cholerae infection

212251_at -0.517 9.406 -2.951 9.794e-03 0.218 -2.662 MTDH metadherin 8 98725582 AI972475 8q22.1 Hs.377155 23

negative regulation of transcription from RNA polymerase II promoter

protein binding

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

tight junction

membrane

integral to membrane

cell junction

nuclear membrane

perinuclear region of cytoplasm

NF-kappaB binding

positive regulation of NF-kappaB transcription factor activity

 
214719_at -0.319 6.682 -2.951 9.803e-03 0.218 -2.663 SLC46A3 solute carrier family 46, member 3 13 -28172219 AK026720 13q12.3 Hs.117167 5

membrane

integral to membrane

 
218311_at -0.566 7.417 -2.950 9.818e-03 0.218 -2.664 MAP4K3 mitogen-activated protein kinase kinase kinase kinase 3 2 -39329925 NM_003618 2p22.1 Hs.655750 7

nucleotide binding

protein serine/threonine kinase activity

small GTPase regulator activity

protein binding

ATP binding

protein amino acid phosphorylation

response to stress

protein kinase cascade

JNK cascade

transferase activity

MAPK signaling pathway

1552785_at 0.392 2.742 2.950 9.821e-03 0.218 -2.665 ZNF781 zinc finger protein 781 19 -42850489 NM_152605 19q13.12 Hs.116622 1

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
205843_x_at 0.417 8.314 2.949 9.827e-03 0.218 -2.665 CRAT carnitine acetyltransferase 9 -130896895, -130896893 NM_000755 9q34.1 Hs.12068 10

carnitine O-acetyltransferase activity

mitochondrion

mitochondrial inner membrane

peroxisome

endoplasmic reticulum

lipid metabolic process

fatty acid metabolic process

transport

acyltransferase activity

energy derivation by oxidation of organic compounds

membrane

transferase activity

 
225302_at -0.471 7.086 -2.948 9.849e-03 0.218 -2.667 TMX3 thioredoxin-related transmembrane protein 3 18 -64491904 BE503286 18q22 Hs.440534 11

protein disulfide isomerase activity

endoplasmic reticulum

membrane

integral to membrane

isomerase activity

cell redox homeostasis

 
227874_at 0.534 7.601 2.948 9.855e-03 0.218 -2.668 EMCN endomucin 4 -101535522 AI635774 4q24 Hs.152913 12

extracellular region

plasma membrane

integral to membrane

 
216348_at 0.320 7.452 2.948 9.863e-03 0.219 -2.669 RPS17P5 ribosomal protein S17 pseudogene 5 6   AL049693 6p12.3   2    
240770_at 0.795 2.734 2.947 9.867e-03 0.219 -2.669 TMEM171 transmembrane protein 171 5 72452143 AW058459 5q13.2 Hs.162246 5

membrane

integral to membrane

 
211015_s_at -0.660 6.698 -2.947 9.870e-03 0.219 -2.669 HSPA4 heat shock 70kDa protein 4 5 132415560 L12723 5q31.1-q31.2 Hs.90093 108

nucleotide binding

ATP binding

nucleus

cytoplasm

response to unfolded protein

cellular chaperone-mediated protein complex assembly

mitochondrial outer membrane translocase complex assembly

Antigen processing and presentation

226254_s_at -0.464 7.197 -2.947 9.876e-03 0.219 -2.670 KIAA1430 KIAA1430 4 -186317812 AI912523 4q35.1 Hs.535734 3    
201881_s_at -0.574 7.217 -2.946 9.901e-03 0.219 -2.672 ARIH1 ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila) 15 70553720 NM_005744 15q24 Hs.268787 11

ubiquitin ligase complex

protein binding

cytoplasm

ubiquitin-dependent protein catabolic process

zinc ion binding

small conjugating protein ligase activity

metal ion binding

 
206016_at -0.602 5.393 -2.946 9.902e-03 0.219 -2.672 CCDC22 coiled-coil domain containing 22 X 48978884 NM_014008 Xp11.23 Hs.247700 Hs.26333 6

molecular_function

cellular_component

biological_process

 
200042_at -0.380 7.938 -2.945 9.907e-03 0.219 -2.673 C22orf28 chromosome 22 open reading frame 28 22 -31113561 NM_014306 22q12 Hs.474643 10

cellular_component

cell-matrix adhesion

vinculin binding

substrate adhesion-dependent cell spreading

 
226234_at -0.346 3.807 -2.945 9.909e-03 0.219 -2.673 GDF11 growth differentiation factor 11 12 54423330 D80983 12q13.2 Hs.600883 10

skeletal system development

ureteric bud development

cytokine activity

protein binding

extracellular region

extracellular space

nervous system development

mesoderm development

growth factor activity

negative regulation of cell proliferation

organ morphogenesis

spinal cord anterior/posterior patterning

pancreas development

growth

negative regulation of cell differentiation

cell maturation

camera-type eye morphogenesis

 
209486_at -0.411 7.581 -2.945 9.911e-03 0.219 -2.673 UTP3 UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) 4 71773059 BC004546 4q13.3 Hs.322901 15

molecular_function

protein binding

nucleus

nucleolus

multicellular organismal development

brain development

gene silencing

chromatin modification

 
225140_at -0.430 3.678 -2.945 9.918e-03 0.219 -2.674 KLF3 Kruppel-like factor 3 (basic) 4 38342184 BF438116 4p14 Hs.298658 12

transcription factor activity

intracellular

nucleus

multicellular organismal development

zinc ion binding

regulation of transcription

metal ion binding

 
239924_at 0.244 3.275 2.944 9.929e-03 0.219 -2.675 LOC91316 glucuronidase, beta/ immunoglobulin lambda-like polypeptide 1 pseudogene 22 -22310675 AA629699 22q11.23 Hs.148656 4    
202765_s_at -0.928 5.808 -2.944 9.931e-03 0.219 -2.675 FBN1 fibrillin 1 15 -46487796 AI264196 15q21.1 Hs.591133 179

skeletal system development

microfibril

extracellular matrix structural constituent

extracellular matrix structural constituent

calcium ion binding

calcium ion binding

protein binding

extracellular region

basement membrane

extracellular space

heart development

 
209512_at 0.773 8.671 2.944 9.945e-03 0.219 -2.676 HSDL2 hydroxysteroid dehydrogenase like 2 9 114182171 BC004331 9q32 Hs.59486 6

binding

sterol carrier activity

oxidoreductase activity

oxidation reduction

 
202813_at 0.320 7.372 2.943 9.958e-03 0.219 -2.677 TARBP1 TAR (HIV-1) RNA binding protein 1 1 -232593681 NM_005646 1q42.3 Hs.498115 12

RNA binding

binding

nucleus

regulation of transcription from RNA polymerase II promoter

RNA processing

RNA methyltransferase activity

transferase activity

 
224899_s_at -0.408 8.102 -2.943 9.959e-03 0.219 -2.677 MAGT1 magnesium transporter 1 X -76968519 BG292405 Xq21.1 Hs.323562 Hs.710189 14

dolichyl-diphosphooligosaccharide-protein glycotransferase activity

endoplasmic reticulum

oligosaccharyltransferase complex

membrane

integral to membrane

protein amino acid N-linked glycosylation via asparagine

 
204736_s_at -0.373 4.947 -2.942 9.970e-03 0.219 -2.678 CSPG4 chondroitin sulfate proteoglycan 4 15 -73753717 NM_001897 15q24.2 Hs.513044 34

angiogenesis

signal transducer activity

receptor signaling protein tyrosine phosphatase signaling protein activity

protein binding

plasma membrane

integral to plasma membrane

signal transduction

multicellular organismal development

receptor signaling protein tyrosine kinase signaling protein activity

cell surface

cell differentiation

cell projection

tissue remodeling

 
221764_at -0.405 5.979 -2.942 9.986e-03 0.220 -2.680 C19orf22 chromosome 19 open reading frame 22 19 -847502 AL574186 19p13.3 Hs.557655 2

nucleic acid binding

nucleus

 
228793_at -0.463 5.823 -2.942 9.986e-03 0.220 -2.680 JMJD1C jumonji domain containing 1C 10 -64596993, -64596993 BF002296 10q21.3 Hs.413416 10

iron ion binding

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

oxidoreductase activity

chromatin modification

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

metal ion binding

thyroid hormone receptor binding

oxidation reduction

 
219811_at 0.344 6.849 2.941 9.999e-03 0.220 -2.681 DGCR8 DiGeorge syndrome critical region gene 8 22 18447833 NM_022720 22q11.2 Hs.643452 Hs.713579 21

double-stranded RNA binding

protein binding

intracellular

nucleus

cytoplasm

primary microRNA processing

 
214460_at 0.388 4.817 2.940 1.001e-02 0.220 -2.682 LSAMP limbic system-associated membrane protein 3 -117011831 NM_002338 3q13.2-q21 Hs.657246 8

protein binding

plasma membrane

cell adhesion

nervous system development

anchored to membrane

 
225542_at -0.285 5.045 -2.940 1.002e-02 0.220 -2.683 ACAP3 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 1 -1217626 AB051503   Hs.535257 6

ARF GTPase activator activity

zinc ion binding

regulation of ARF GTPase activity

metal ion binding

Endocytosis

201466_s_at -0.692 7.438 -2.940 1.002e-02 0.220 -2.683 JUN jun oncogene 1 -59019050 NM_002228 1p32-p31 Hs.714791 443

nuclear chromosome

transcription factor activity

RNA polymerase II transcription factor activity

Rho GTPase activator activity

nucleus

transcription factor complex

cytosol

regulation of transcription, DNA-dependent

transforming growth factor beta receptor signaling pathway

SMAD protein nuclear translocation

transcription factor binding

negative regulation of cell proliferation

cellular process

promoter binding

negative regulation of protein amino acid autophosphorylation

leading edge cell differentiation

response to drug

positive regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

protein dimerization activity

regulation of cell cycle

SMAD protein signal transduction

R-SMAD binding

MAPK signaling pathway

ErbB signaling pathway

Wnt signaling pathway

Focal adhesion

Toll-like receptor signaling pathway

T cell receptor signaling pathway

B cell receptor signaling pathway

Neurotrophin signaling pathway

GnRH signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

208064_s_at 0.396 3.381 2.940 1.002e-02 0.220 -2.683 ST8SIA3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 18 53170718 NM_015879 18q21.31 Hs.23172 7

alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity

Golgi apparatus

protein amino acid glycosylation

N-glycan processing

glycosphingolipid biosynthetic process

oligosaccharide metabolic process

membrane

integral to membrane

integral to Golgi membrane

 
208670_s_at -0.511 9.136 -2.939 1.003e-02 0.220 -2.684 EID1 EP300 interacting inhibitor of differentiation 1 15 46957581 AF274951 15q21.1-q21.2 Hs.255973 Hs.714048 12

negative regulation of transcription from RNA polymerase II promoter

transcription corepressor activity

protein binding

cellular_component

nucleus

cytoplasm

cell cycle

specific transcriptional repressor activity

cell differentiation

histone acetyltransferase regulator activity

histone acetyltransferase binding

regulation of transcription

 
219396_s_at 0.302 6.138 2.939 1.003e-02 0.220 -2.684 NEIL1 nei endonuclease VIII-like 1 (E. coli) 15 73426383 NM_024608 15q24.2 Hs.512732 35

damaged DNA binding

DNA-(apurinic or apyrimidinic site) lyase activity

nucleus

cytoplasm

base-excision repair

nucleotide-excision repair

response to DNA damage stimulus

response to oxidative stress

protein C-terminus binding

metabolic process

zinc ion binding

lyase activity

DNA N-glycosylase activity

negative regulation of nuclease activity

Base excision repair

243344_at 0.343 5.288 2.939 1.004e-02 0.220 -2.685 LOC100130054 hypothetical LOC100130054 9   BE218142 9q21.12 Hs.207074      
201030_x_at 1.113 10.837 2.938 1.005e-02 0.220 -2.686 LDHB lactate dehydrogenase B 12 -21679542 NM_002300 12p12.2-p12.1 Hs.446149 27

L-lactate dehydrogenase activity

binding

cytoplasm

oxidoreductase activity

anaerobic glycolysis

cellular carbohydrate metabolic process

oxidation reduction

Glycolysis / Gluconeogenesis

Cysteine and methionine metabolism

Pyruvate metabolism

Propanoate metabolism

Metabolic pathways

210296_s_at -0.463 8.183 -2.938 1.005e-02 0.220 -2.686 PXMP3 peroxisomal membrane protein 3, 35kDa 8 -78055048 BC005375 8q21.1 Hs.437966 Hs.703022 19

neuron migration

protein binding

peroxisome

peroxisomal membrane

integral to peroxisomal membrane

peroxisome organization

nervous system development

zinc ion binding

membrane

integral to membrane

metal ion binding

 
220794_at -0.871 3.176 -2.938 1.005e-02 0.220 -2.686 GREM2 gremlin 2, cysteine knot superfamily, homolog (Xenopus laevis) 1 -238719495 NM_022469 1q43 Hs.98206 9

cytokine activity

extracellular region

extracellular region

extracellular space

BMP signaling pathway

 
227219_x_at 0.356 7.879 2.938 1.006e-02 0.220 -2.686 MAP1LC3A microtubule-associated protein 1 light chain 3 alpha 20 32598352, 32610179 BE857601 20cen-q13 Hs.632273 29

autophagic vacuole formation

protein binding

cytoplasm

autophagic vacuole

cytosol

microtubule

autophagy

phosphatidylethanolamine binding

modification-dependent protein catabolic process

organelle membrane

cytoplasmic vesicle

 
224986_s_at -0.388 8.123 -2.938 1.006e-02 0.220 -2.686 PDPK1 3-phosphoinositide dependent protein kinase-1 16 2527970 AL040394 16p13.3 Hs.459691 103

nucleotide binding

3-phosphoinositide-dependent protein kinase activity

protein binding

ATP binding

cytoplasm

cytosol

plasma membrane

plasma membrane

negative regulation of protein kinase activity

intracellular signaling cascade

transferase activity

peptidyl-threonine phosphorylation

actin cytoskeleton organization

activation of protein kinase B activity

cellular response to insulin stimulus

regulation of establishment of protein localization

PPAR signaling pathway

mTOR signaling pathway

Focal adhesion

Insulin signaling pathway

Endometrial cancer

Prostate cancer

Non-small cell lung cancer

214937_x_at -0.462 8.865 -2.938 1.007e-02 0.220 -2.687 PCM1 pericentriolar material 1 8 17824645 AI924817 8p22-p21.3 Hs.491148 36

pericentriolar material

protein binding

cytoplasm

cytoskeleton

nonmotile primary cilium

centriolar satellite

cilium assembly

cilium assembly

centrosome organization

 
1554014_at -0.581 4.405 -2.937 1.008e-02 0.220 -2.688 CHD2 chromodomain helicase DNA binding protein 2 15 91244554, 91244554 BC007347 15q26 Hs.220864 9

nucleotide binding

chromatin

DNA binding

chromatin binding

ATP-dependent DNA helicase activity

helicase activity

ATP binding

nucleus

chromatin assembly or disassembly

regulation of transcription from RNA polymerase II promoter

hydrolase activity

 
222537_s_at -0.641 6.562 -2.937 1.008e-02 0.220 -2.688 CDC42SE1 CDC42 small effector 1 1 -149290070 W44413 1q21.3 Hs.22065 4

GTPase inhibitor activity

protein binding

cytoplasm

cytoskeleton

plasma membrane

phagocytosis

signal transduction

regulation of cell shape

 
241343_at -0.489 5.153 -2.937 1.008e-02 0.220 -2.688 RNASEH1 ribonuclease H1 2 -3570565 BF127479 2p25 Hs.568006 20

magnesium ion binding

RNA binding

endonuclease activity

ribonuclease H activity

ribonuclease activity

cytoplasm

mitochondrion

RNA catabolic process

hydrolase activity

DNA replication

228813_at -0.774 8.494 -2.937 1.009e-02 0.220 -2.689 HDAC4 histone deacetylase 4 2 -239634800 AW206037 2q37.3 Hs.20516 Hs.688314 83

histone deacetylase complex

negative regulation of transcription from RNA polymerase II promoter

skeletal system development

DNA binding

histone deacetylase activity

nucleus

cytoplasm

inflammatory response

cell cycle

multicellular organismal development

nervous system development

transcription factor binding

negative regulation of cell proliferation

transcription repressor activity

chromatin modification

hydrolase activity

B cell differentiation

positive regulation of protein sumoylation

negative regulation of striated muscle development

 
232844_at 0.271 3.767 2.936 1.009e-02 0.220 -2.690 IFT140 intraflagellar transport 140 homolog (Chlamydomonas) 16 -1500429 AU159127 16p13.3 Hs.389438 6    
229492_at 0.332 4.126 2.936 1.010e-02 0.220 -2.690 VANGL1 vang-like 1 (van gogh, Drosophila) 1 115986096 R85437 1p11-p13.1 Hs.515130 12

protein binding

multicellular organismal development

membrane

integral to membrane

Wnt signaling pathway

201068_s_at -0.317 10.739 -2.936 1.011e-02 0.220 -2.691 PSMC2 proteasome (prosome, macropain) 26S subunit, ATPase, 2 7 102775324 NM_002803 7q22.1-q22.3 Hs.437366 56

nucleotide binding

proteasome complex

protein binding

ATP binding

nucleus

cytoplasm

cytosol

ubiquitin-dependent protein catabolic process

hydrolase activity

ATPase activity

protein catabolic process

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

interspecies interaction between organisms

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

204011_at -0.422 6.771 -2.935 1.012e-02 0.220 -2.692 SPRY2 sprouty homolog 2 (Drosophila) 13 -79808112 NM_005842 13q31.1 Hs.18676 59

protein binding

cytoplasm

cytosol

microtubule

plasma membrane

plasma membrane

cell-cell signaling

multicellular organismal development

sensory perception of sound

organ morphogenesis

regulation of signal transduction

lung development

inner ear morphogenesis

negative regulation of MAP kinase activity

cell fate commitment

branching morphogenesis of a tube

Jak-STAT signaling pathway

225331_at -0.438 7.791 -2.935 1.013e-02 0.220 -2.693 CCDC50 coiled-coil domain containing 50 3 192529567 BF941088 3q28 Hs.478682 12

protein binding

cytoplasm

 
212932_at -0.389 5.754 -2.934 1.014e-02 0.220 -2.694 RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 2 135526322 AK022494 2q21.3 Hs.306327 17

GTPase activator activity

Rab GTPase activator activity

soluble fraction

cytoplasm

Rab GTPase binding

regulation of GTPase activity

 
227111_at 0.399 5.341 2.934 1.014e-02 0.220 -2.694 ZBTB34 zinc finger and BTB domain containing 34 9 128662764 BG179317 9q33.3 Hs.177633 4

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
232432_s_at -0.527 4.678 -2.934 1.015e-02 0.220 -2.694 SLC30A5 solute carrier family 30 (zinc transporter), member 5 5 68425573, 68425637 AK022818 5q12.1 Hs.631975 10

zinc ion transmembrane transporter activity

membrane fraction

Golgi apparatus

integral to plasma membrane

cation transport

cobalt ion transport

zinc ion transport

cellular zinc ion homeostasis

zinc ion binding

cation transmembrane transporter activity

response to zinc ion

regulation of proton transport

membrane

apical plasma membrane

secretory granule

 
224327_s_at 0.533 6.076 2.933 1.016e-02 0.220 -2.695 DGAT2 diacylglycerol O-acyltransferase homolog 2 (mouse) 11 75157425 AB048286 11q13.5 Hs.334305 16

2-acylglycerol O-acyltransferase activity

diacylglycerol O-acyltransferase activity

membrane fraction

endoplasmic reticulum

glycerol metabolic process

acyltransferase activity

lipid biosynthetic process

membrane

integral to membrane

transferase activity

triglyceride biosynthetic process

Glycerolipid metabolism

Retinol metabolism

Metabolic pathways

218071_s_at -0.317 7.148 -2.933 1.016e-02 0.220 -2.695 MKRN2 makorin ring finger protein 2 3 12573593 NM_014160 3p25 Hs.591666 5

molecular_function

nucleic acid binding

protein binding

intracellular

biological_process

zinc ion binding

metal ion binding

 
207289_at 0.420 5.588 2.933 1.017e-02 0.220 -2.696 MMP25 matrix metallopeptidase 25 16 3036682 NM_004142 16p13.3 Hs.654979 16

metalloendopeptidase activity

calcium ion binding

extracellular region

proteinaceous extracellular matrix

plasma membrane

proteolysis

inflammatory response

metabolic process

peptidase activity

zinc ion binding

cell surface

anchored to membrane

 
204009_s_at -0.554 7.833 -2.933 1.017e-02 0.220 -2.696 KRAS v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog 12 -25249446 W80678 12p12.1 Hs.505033 430

nucleotide binding

protein binding

GTP binding

intracellular

membrane fraction

plasma membrane

plasma membrane

endocytosis

Ras protein signal transduction

cell aging

positive regulation of cell proliferation

visual learning

actin cytoskeleton organization

regulation of synaptic transmission, GABAergic

positive regulation of Rac protein signal transduction

negative regulation of neuron apoptosis

regulation of long-term neuronal synaptic plasticity

striated muscle cell differentiation

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

Dorso-ventral axis formation

Axon guidance

VEGF signaling pathway

Tight junction

Gap junction

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Long-term potentiation

Neurotrophin signaling pathway

Long-term depression

Regulation of actin cytoskeleton

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Thyroid cancer

Melanoma

Bladder cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Non-small cell lung cancer

222494_at -0.324 9.126 -2.932 1.018e-02 0.220 -2.697 FOXN3 forkhead box N3 14 -88692268, -88692268 AW051527 14q31.3 Hs.434286 Hs.621371 16

DNA damage checkpoint

G2 phase of mitotic cell cycle

transcription factor activity

nucleus

cell cycle

protein C-terminus binding

transcription repressor activity

sequence-specific DNA binding

negative regulation of transcription, DNA-dependent

 
218107_at -0.488 7.763 -2.932 1.018e-02 0.220 -2.697 WDR26 WD repeat domain 26 1 -222639467 NM_025160 1q42.11-q42.12 Hs.497873 8

cytoplasm

 
224461_s_at -0.475 5.674 -2.932 1.018e-02 0.220 -2.697 AIFM2 apoptosis-inducing factor, mitochondrion-associated, 2 10 -71542035 BC006121 10q22.1 Hs.655377 13

DNA binding

electron-transferring-flavoprotein dehydrogenase activity

electron-transferring-flavoprotein dehydrogenase activity

cytoplasm

mitochondrion

mitochondrial outer membrane

cytosol

induction of apoptosis

apoptotic mitochondrial changes

membrane

integral to membrane

oxidoreductase activity

chromosome condensation

FAD binding

oxidation reduction

 
216083_s_at 0.365 5.442 2.932 1.018e-02 0.220 -2.698 NEU3 sialidase 3 (membrane sialidase) 11 74377597 AK022450 11q13.5 Hs.191074 25

exo-alpha-sialidase activity

plasma membrane

integral to plasma membrane

carbohydrate metabolic process

ganglioside catabolic process

metabolic process

hydrolase activity, acting on glycosyl bonds

Other glycan degradation

Sphingolipid metabolism

1555020_a_at 0.257 5.558 2.932 1.019e-02 0.220 -2.698 ARHGAP20 Rho GTPase activating protein 20 11 -109952975 BC039340 11q23.1 Hs.6136 7

GTPase activator activity

intracellular

signal transduction

 
1560011_at 0.325 3.867 2.932 1.019e-02 0.220 -2.698 PSCA prostate stem cell antigen 8 143758876 AK092432 8q24.2 Hs.652235 Hs.711174 31

plasma membrane

anchored to membrane

 
1553530_a_at -0.850 7.157 -2.931 1.020e-02 0.220 -2.699 ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 10 -33236244, -33229251, -33229251, -33229251 NM_033669 10p11.2 Hs.643813 512

G1/S transition of mitotic cell cycle

in utero embryonic development

cell fate specification

receptor activity

integrin binding

focal adhesion

cellular defense response

cell adhesion

homophilic cell adhesion

leukocyte adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

positive regulation of cell proliferation

integrin complex

germ cell migration

cell surface

integral to membrane

synaptosome

B cell differentiation

neuromuscular junction

ruffle membrane

cell-cell adhesion mediated by integrin

sarcolemma

melanosome

identical protein binding

interspecies interaction between organisms

sarcomere organization

negative regulation of cell differentiation

protein heterodimerization activity

regulation of cell cycle

cardiac muscle cell differentiation

Axon guidance

Focal adhesion

ECM-receptor interaction

Cell adhesion molecules (CAMs)

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Pathogenic Escherichia coli infection - EHEC

Pathways in cancer

Small cell lung cancer

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

1569156_at 0.399 3.068 2.931 1.021e-02 0.220 -2.700 ZNF846 zinc finger protein 846 19 -9729150 BC037359 19p13.2 Hs.665717 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
34408_at -0.558 10.274 -2.930 1.022e-02 0.220 -2.701 RTN2 reticulon 2 19 -50680389, -50680389, -50680389 AF004222 19q13.32 Hs.47517 10

signal transducer activity

endoplasmic reticulum

signal transduction

membrane

integral to membrane

integral to endoplasmic reticulum membrane

 
1569852_at -1.099 7.982 -2.930 1.022e-02 0.220 -2.701 C7orf53 chromosome 7 open reading frame 53 7 111908143, 111908301 BC031976 7q31.1 Hs.396189 5

membrane

integral to membrane

 
207169_x_at -0.823 6.635 -2.930 1.022e-02 0.220 -2.701 DDR1 discoidin domain receptor tyrosine kinase 1 6 30959839, 30960305, 30964443, 2300465, 2300931, 2305069, 2098794, 2099260, 2103398 NM_001954 6p21.3 Hs.631988 60

nucleotide binding

transmembrane receptor protein tyrosine kinase activity

receptor activity

protein binding

ATP binding

extracellular region

integral to plasma membrane

protein amino acid phosphorylation

cell adhesion

transmembrane receptor protein tyrosine kinase signaling pathway

membrane

transferase activity

 
219213_at 0.495 6.066 2.930 1.022e-02 0.220 -2.701 JAM2 junctional adhesion molecule 2 21 25933459 NM_021219 21q21.2 Hs.517227 21

plasma membrane

plasma membrane

integral to plasma membrane

tight junction

cell-cell adhesion

cell junction

Cell adhesion molecules (CAMs)

Tight junction

Leukocyte transendothelial migration

Epithelial cell signaling in Helicobacter pylori infection

217356_s_at -0.885 10.442 -2.930 1.022e-02 0.220 -2.701 PGK1 phosphoglycerate kinase 1 X 77246321 S81916 Xq13 Hs.78771 52

nucleotide binding

phosphoglycerate kinase activity

ATP binding

cytoplasm

glycolysis

phosphorylation

transferase activity

Glycolysis / Gluconeogenesis

Carbon fixation in photosynthetic organisms

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

239996_x_at 0.376 6.126 2.929 1.024e-02 0.220 -2.703 ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 12 109203414, 109203414 AI671237 12q23-q24.1 Hs.506759 84

nucleotide binding

magnesium ion binding

regulation of the force of heart contraction

calcium-transporting ATPase activity

calcium ion binding

ATP binding

membrane fraction

microsome

integral to plasma membrane

ATP biosynthetic process

cation transport

cellular calcium ion homeostasis

ER-nuclear signaling pathway

cell adhesion

metabolic process

epidermis development

membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

sarcoplasmic reticulum membrane

negative regulation of heart contraction

S100 alpha binding

sarcoplasmic reticulum calcium ion transport

Calcium signaling pathway

Cardiac muscle contraction

Alzheimer's disease

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

219035_s_at -0.553 8.558 -2.929 1.025e-02 0.220 -2.704 RNF34 ring finger protein 34 12 120322284 NM_025126 12q24.31 Hs.292804 11

protein binding

nucleus

apoptosis

zinc ion binding

membrane

nuclear speck

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
223384_s_at -0.436 5.754 -2.928 1.027e-02 0.221 -2.705 TRIM4 tripartite motif-containing 4 7 -99325971 BE501464 7q22-q31.1 Hs.50749 8

protein binding

intracellular

cytoplasm

zinc ion binding

metal ion binding

protein trimerization

 
241984_at 0.291 4.793 2.928 1.027e-02 0.221 -2.705 FOXN3 forkhead box N3 14 -88692268, -88692268 BF984444 14q31.3 Hs.434286 Hs.621371 16

DNA damage checkpoint

G2 phase of mitotic cell cycle

transcription factor activity

nucleus

cell cycle

protein C-terminus binding

transcription repressor activity

sequence-specific DNA binding

negative regulation of transcription, DNA-dependent

 
208734_x_at -0.648 8.298 -2.927 1.028e-02 0.221 -2.706 RAB2A RAB2A, member RAS oncogene family 8 61592112 M28213 8q12.1 Hs.369017 19

nucleotide binding

GTPase activity

GTP binding

endoplasmic reticulum

Golgi apparatus

ER to Golgi vesicle-mediated transport

small GTPase mediated signal transduction

protein transport

membrane

vesicle-mediated transport

melanosome

 
217832_at -0.514 6.738 -2.927 1.029e-02 0.221 -2.707 SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 6 -86380411, -86380411, -86374221, -86374221, -86374221, -86374221 BE672181 6q14-q15 Hs.571177 33

nucleotide binding

RNA binding

protein binding

nucleus

nucleoplasm

spliceosomal complex

cytoplasm

endoplasmic reticulum

microsome

mRNA processing

poly(A) RNA binding

RNA splicing

interspecies interaction between organisms

 
222589_at -0.456 6.459 -2.926 1.031e-02 0.221 -2.708 NLK nemo-like kinase 17 23393814 AI967933 17q11.2 Hs.208759 24

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

MAP kinase activity

ATP binding

nucleus

nucleolus

cytoplasm

transforming growth factor beta receptor signaling pathway

protein kinase cascade

transcription factor binding

transferase activity

peptidyl-threonine phosphorylation

negative regulation of Wnt receptor signaling pathway

ubiquitin protein ligase binding

serine phosphorylation of STAT3 protein

SH2 domain binding

regulation of transcription

protein amino acid autophosphorylation

MAPK signaling pathway

Wnt signaling pathway

Adherens junction

229793_at -0.562 5.317 -2.926 1.031e-02 0.221 -2.708 ASAH2B N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B 10 52169713 AI656964 10q11.23 Hs.710005 2    
205246_at -0.512 5.991 -2.926 1.031e-02 0.221 -2.709 PEX13 peroxisomal biogenesis factor 13 2 61098315 NM_002618 2p14-p16 Hs.161377 21

fatty acid alpha-oxidation

neuron migration

suckling behavior

protein binding

membrane fraction

peroxisome

peroxisomal membrane

integral to peroxisomal membrane

locomotory behavior

protein transport

membrane

integral to membrane

protein import into peroxisome matrix, docking

protein import into peroxisome matrix, docking

cerebral cortex cell migration

microtubule-based peroxisome localization

 
204775_at -0.419 5.821 -2.925 1.032e-02 0.221 -2.710 CHAF1B chromatin assembly factor 1, subunit B (p60) 21 36679558 NM_005441 21q22.13 Hs.75238 26

chromatin binding

nucleus

nucleoplasm

chromatin assembly complex

cytoplasm

mitochondrion

cytosol

DNA replication

DNA repair

DNA replication-dependent nucleosome assembly

protein complex assembly

response to DNA damage stimulus

cell cycle

histone binding

regulation of transcription

unfolded protein binding

 
220984_s_at -0.336 5.658 -2.925 1.032e-02 0.221 -2.710 SLCO5A1 solute carrier organic anion transporter family, member 5A1 8 -70747123, -70747123, -70747123 NM_030958 8q13.3 Hs.152460 Hs.443609 3

transporter activity

transport

membrane

integral to membrane

 
201097_s_at -0.333 8.868 -2.925 1.032e-02 0.221 -2.710 ARF4 ADP-ribosylation factor 4 3 -57532129 NM_001660 3p21.2-p21.1 Hs.695943 19

nucleotide binding

GTPase activity

GTP binding

intracellular

cytoplasm

Golgi apparatus

plasma membrane

small GTPase mediated signal transduction

protein transport

vesicle-mediated transport

 
213213_at 0.366 5.781 2.925 1.032e-02 0.221 -2.710 DIDO1 death inducer-obliterator 1 20 -61006799, -61006799, -60989013, -60979534 AL035669 20q13.33 Hs.517172 18

protein binding

nucleus

cytoplasm

transcription

apoptosis

zinc ion binding

metal ion binding

 
210305_at -1.132 11.233 -2.925 1.032e-02 0.221 -2.710 PDE4DIP phosphodiesterase 4D interacting protein 1 -143663117, -143663117, -143601947, -143601947, -143562783 AB042557 1q12 Hs.584841 Hs.613082 Hs.657186 Hs.657490 Hs.719077 10

nucleus

cytoplasm

Golgi apparatus

centrosome

 
1553367_a_at 0.372 4.957 2.925 1.033e-02 0.221 -2.710 COX6B2 cytochrome c oxidase subunit VIb polypeptide 2 (testis) 19 -60552881 NM_144613 19q13.42 Hs.550544 5

cytochrome-c oxidase activity

mitochondrion

mitochondrial intermembrane space

mitochondrial crista

Oxidative phosphorylation

Metabolic pathways

Cardiac muscle contraction

Alzheimer's disease

Parkinson's disease

Huntington's disease

223611_s_at 0.760 5.929 2.924 1.034e-02 0.221 -2.711 LNX1 ligand of numb-protein X 1 4 -54021193, -54021193 AI738919 4q12 Hs.518760 Hs.624833 22

ubiquitin-protein ligase activity

protein binding

cytoplasm

zinc ion binding

ligase activity

PDZ domain binding

protein ubiquitination during ubiquitin-dependent protein catabolic process

metal ion binding

protein homooligomerization

 
214764_at -0.793 6.634 -2.924 1.035e-02 0.221 -2.712 RRP15 ribosomal RNA processing 15 homolog (S. cerevisiae) 1 216525251 AW029169 1q41 Hs.660109 8

protein binding

 
205321_at -0.901 5.896 -2.924 1.035e-02 0.221 -2.712 EIF2S3 eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa X 23982985 NM_001415 Xp22.2-p22.1 Hs.539684 21

nucleotide binding

translation initiation factor activity

GTPase activity

protein binding

GTP binding

cytosol

translational initiation

 
236600_at -0.471 5.738 -2.924 1.035e-02 0.221 -2.713 SPG20 spastic paraplegia 20 (Troyer syndrome) 13 -35773776, -35773776, -35773776 AI651603 13q13.3 Hs.440414 19

cell death

 
219126_at -0.637 7.551 -2.924 1.036e-02 0.221 -2.713 PHF10 PHD finger protein 10 6 -169845925 NM_018288 6q27 Hs.435933 14

protein binding

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
218386_x_at -0.485 7.794 -2.924 1.036e-02 0.221 -2.713 USP16 ubiquitin specific peptidase 16 21 29318808 NM_006447 21q22.11 Hs.99819 15

transcription coactivator activity

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

nucleus

cytoplasm

ubiquitin-dependent protein catabolic process

cell cycle

mitosis

peptidase activity

zinc ion binding

chromatin modification

histone deubiquitination

histone binding

ubiquitin binding

regulation of transcription

positive regulation of transcription, DNA-dependent

metal ion binding

protein homotetramerization

cell division

 
1555778_a_at -1.235 3.054 -2.924 1.036e-02 0.221 -2.713 POSTN periostin, osteoblast specific factor 13 -37034719 AY140646 13q13.3 Hs.136348 38

skeletal system development

protein binding

extracellular region

proteinaceous extracellular matrix

cell adhesion

heparin binding

 
228480_at -0.640 6.708 -2.923 1.036e-02 0.221 -2.713 VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 18 9903954 AW296039 18p11.22 Hs.699980 18

signal transducer activity

structural molecule activity

protein binding

membrane fraction

endoplasmic reticulum

microtubule

plasma membrane

tight junction

membrane fusion

integral to membrane

vesicle

positive regulation of I-kappaB kinase/NF-kappaB cascade

protein heterodimerization activity

perinuclear region of cytoplasm

Tight junction

1553874_a_at 0.333 4.069 2.923 1.037e-02 0.221 -2.714 ZSCAN10 zinc finger and SCAN domain containing 10 16 -3078895 NM_032805 16p13.3 Hs.334515 4

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1556960_a_at 0.367 4.074 2.923 1.037e-02 0.221 -2.714 hCG_2007354 hCG2007354 12   AK057223 12q24.33 Hs.703008 2    
235408_x_at 0.698 3.536 2.923 1.037e-02 0.221 -2.714 ZNF117 zinc finger protein 117 7 -64072264 AW058673 7q11.21 Hs.250693 5

molecular_function

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

biological_process

zinc ion binding

metal ion binding

 
213131_at -0.877 6.098 -2.921 1.041e-02 0.221 -2.717 OLFM1 olfactomedin 1 9 137106909, 137106923 R38389 9q34.3 Hs.522484 9

protein binding

endoplasmic reticulum

endoplasmic reticulum lumen

multicellular organismal development

nervous system development

membrane

 
201014_s_at -0.598 6.343 -2.920 1.043e-02 0.221 -2.719 PAICS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase 4 56996671, 56997025 NM_006452 4q12 Hs.518774 Hs.709570 16

nucleotide binding

phosphoribosylaminoimidazole carboxylase activity

phosphoribosylaminoimidazolesuccinocarboxamide synthase activity

ATP binding

purine nucleotide biosynthetic process

'de novo' IMP biosynthetic process

purine base biosynthetic process

lyase activity

ligase activity

identical protein binding

Purine metabolism

Metabolic pathways

209841_s_at -1.247 4.453 -2.920 1.044e-02 0.221 -2.720 LRRN3 leucine rich repeat neuronal 3 7 110518297 AL442092 7q31.1 Hs.3781 6

protein binding

membrane

integral to membrane

 
232054_at -1.412 3.202 -2.920 1.044e-02 0.221 -2.720 PCDH20 protocadherin 20 13 -60881819 AA040057 13q21 Hs.391781 9

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

 
212764_at -0.403 9.713 -2.920 1.044e-02 0.221 -2.720 ZEB1 zinc finger E-box binding homeobox 1 10 31647429, 31647717, 31647752, 31648106, 31650069 AI806174 10p11.2 Hs.124503 52

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

transcription coactivator activity

transcription corepressor activity

intracellular

nucleus

immune response

zinc ion binding

cell proliferation

sequence-specific DNA binding

metal ion binding

 
217227_x_at 0.314 5.527 2.920 1.045e-02 0.221 -2.721 IGL@ immunoglobulin lambda locus 22   X93006 22q11.1-q11.2 Hs.449585 Hs.561078 20    
222907_x_at -0.878 5.851 -2.919 1.045e-02 0.221 -2.721 TMEM50B transmembrane protein 50B 21 -33743317 BC000569 21q22.11 Hs.433668 8

molecular_function

endoplasmic reticulum

plasma membrane

biological_process

integral to membrane

 
223428_s_at -0.347 6.391 -2.919 1.046e-02 0.221 -2.722 ISY1 ISY1 splicing factor homolog (S. cerevisiae) 3 -130330924 AI761808 3q21.3 Hs.512661 7

nucleus

spliceosomal complex

nucleolus

cytoplasm

mRNA processing

RNA splicing

 
224752_at -0.278 9.383 -2.918 1.048e-02 0.221 -2.723 PL-5283 PL-5283 protein 7 134997760 BG031051 7q33 Hs.200022 3    
205289_at -0.328 4.035 -2.917 1.049e-02 0.221 -2.724 BMP2 bone morphogenetic protein 2 20 6696744 AA583044 20p12 Hs.73853 195

branching involved in ureteric bud morphogenesis

cytokine activity

extracellular region

extracellular region

extracellular space

inflammatory response

cell-cell signaling

growth factor activity

negative regulation of cell proliferation

embryonic development

organ morphogenesis

positive regulation of pathway-restricted SMAD protein phosphorylation

specific transcriptional repressor activity

positive regulation of bone mineralization

BMP signaling pathway

BMP signaling pathway

negative regulation of gene-specific transcription

cardiac cell differentiation

growth

odontogenesis of dentine-containing tooth

cell fate commitment

positive regulation of osteoblast differentiation

negative regulation of cell cycle

positive regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

SMAD binding

positive regulation of astrocyte differentiation

cartilage development

cardiac epithelial to mesenchymal transition

Cytokine-cytokine receptor interaction

Hedgehog signaling pathway

TGF-beta signaling pathway

Pathways in cancer

Basal cell carcinoma

222790_s_at 0.504 5.770 2.917 1.049e-02 0.221 -2.725 RSBN1 round spermatid basic protein 1 1 -114105976 AK022166 1p13.2 Hs.486285 6

protein binding

nucleus

 
240381_at 0.368 5.864 2.917 1.050e-02 0.221 -2.725 ZBED5 zinc finger, BED-type containing 5 11 -10830829 AA813103 11p15.3 Hs.655066 5

DNA binding

zinc ion binding

metal ion binding

 
232265_at 0.405 4.381 2.917 1.050e-02 0.221 -2.725 ATXN7L1 ataxin 7-like 1 7 -105187871, -105032456, -105032456 BC003517 7q22.3 Hs.489603 8    
201314_at -0.491 8.009 -2.917 1.050e-02 0.221 -2.725 STK25 serine/threonine kinase 25 (STE20 homolog, yeast) 2 -242083104 NM_006374 2q37.3 Hs.516807 12

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

ATP binding

cytoplasm

Golgi apparatus

protein amino acid phosphorylation

response to oxidative stress

signal transduction

transferase activity

identical protein binding

 
200626_s_at -0.550 8.092 -2.916 1.052e-02 0.222 -2.727 MATR3 matrin 3 5 138637690, 138657253 NM_018834 5q31.2 Hs.268939 24

nucleotide binding

RNA binding

structural molecule activity

protein binding

intracellular

nucleus

nuclear inner membrane

zinc ion binding

nuclear matrix

metal ion binding

 
217503_at -0.373 2.709 -2.916 1.052e-02 0.222 -2.727 STK17B serine/threonine kinase 17b 2 -196706552 AA203487 2q32.3 Hs.710234 Hs.88297 7

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

protein amino acid phosphorylation

apoptosis

induction of apoptosis

protein kinase cascade

actin cytoskeleton

transferase activity

 
238805_at -0.596 5.372 -2.916 1.052e-02 0.222 -2.727 C11orf52 chromosome 11 open reading frame 52 11 111294810 AA991551 11q23.1 Hs.97013 3    
218848_at -0.365 6.025 -2.916 1.053e-02 0.222 -2.727 THOC6 THO complex 6 homolog (Drosophila) 16 3014032 NM_024339 16p13.3 Hs.412304 2    
205329_s_at -0.459 5.602 -2.915 1.054e-02 0.222 -2.728 SNX4 sorting nexin 4 3 -126648183 NM_003794 3q21.2 Hs.507243 9

protein binding

cytoplasm

endocytosis

cell communication

protein transport

phosphoinositide binding

 
205788_s_at -0.434 9.858 -2.915 1.055e-02 0.222 -2.730 ZC3H11A zinc finger CCCH-type containing 11A 1 202031373 NM_014827 1q32.1 Hs.532399 13

nucleic acid binding

protein binding

zinc ion binding

metal ion binding

 
213152_s_at -0.544 5.915 -2.915 1.055e-02 0.222 -2.730 SFRS2B splicing factor, arginine/serine-rich 2B 11 94439703 AI343248 11q22 Hs.476680 Hs.713908 6

nucleotide binding

RNA binding

nucleus

mRNA processing

RNA splicing

 
214182_at -0.637 6.108 -2.914 1.056e-02 0.222 -2.730 ARF6 ADP-ribosylation factor 6 14 49429485 AA243143 14q21.3 Hs.525330 Hs.682124 86

nucleotide binding

ruffle

liver development

GTPase activity

protein binding

GTP binding

intracellular

membrane fraction

cytoplasm

endosome

Golgi apparatus

plasma membrane

cell cortex

apoptosis

cell motion

cell adhesion

small GTPase mediated signal transduction

protein transport

vesicle-mediated transport

positive regulation of actin filament polymerization

cortical actin cytoskeleton organization

ruffle organization

regulation of Rac protein signal transduction

negative regulation of receptor-mediated endocytosis

Endocytosis

Fc gamma R-mediated phagocytosis

221688_s_at -0.481 8.008 -2.914 1.056e-02 0.222 -2.731 IMP3 IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast) 15 -73718490 AL136913 15q24 Hs.513043 21

protein binding

intracellular

nucleus

nucleolus

rRNA processing

rRNA binding

ribonucleoprotein complex

 
205638_at 0.430 2.509 2.914 1.057e-02 0.222 -2.731 BAI3 brain-specific angiogenesis inhibitor 3 6 69402352 NM_001704 6q12 Hs.13261 8

plasma membrane

neuropeptide signaling pathway

integral to membrane

integral to membrane

brain-specific angiogenesis inhibitor activity

 
243313_at -0.564 10.623 -2.914 1.057e-02 0.222 -2.731 SYNPO2L synaptopodin 2-like 10 -75074649, -75074649 AI141151 10q22.2 Hs.645273 4

actin binding

protein binding

cytoplasm

cytoskeleton

 
224378_x_at 0.381 7.995 2.914 1.057e-02 0.222 -2.731 MAP1LC3A microtubule-associated protein 1 light chain 3 alpha 20 32598352, 32610179 AF276658 20cen-q13 Hs.632273 29

autophagic vacuole formation

protein binding

cytoplasm

autophagic vacuole

cytosol

microtubule

autophagy

phosphatidylethanolamine binding

modification-dependent protein catabolic process

organelle membrane

cytoplasmic vesicle

 
202115_s_at -0.239 6.997 -2.914 1.057e-02 0.222 -2.731 NOC2L nucleolar complex associated 2 homolog (S. cerevisiae) 1 -869445 NM_015658 1p36.33 Hs.405987 23

protein binding

nucleus

nucleolus

 
212998_x_at 0.931 5.689 2.914 1.057e-02 0.222 -2.732 HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 6 -32735634 AI583173 6p21.3 Hs.409934 Hs.534322 Hs.713773 998

antigen processing and presentation of peptide or polysaccharide antigen via MHC class II

plasma membrane

immune response

immune response

membrane

membrane

integral to membrane

MHC class II receptor activity

MHC class II protein complex

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

219625_s_at -0.530 6.892 -2.912 1.060e-02 0.222 -2.734 COL4A3BP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein 5 -74702683, -74702683 NM_005713 5q13.3 Hs.270437 26

protein kinase activity

protein binding

cellular_component

cytoplasm

endoplasmic reticulum

Golgi apparatus

protein amino acid phosphorylation

lipid transport

immune response

 
214910_s_at 0.338 5.372 2.912 1.061e-02 0.222 -2.734 APOM apolipoprotein M 6 31731649, 3069795, 2871254 AF161454 6p21.33 Hs.534468 38

lipid transporter activity

protein binding

extracellular region

cytosol

integral to plasma membrane

lipid transport

defense response

response to unfolded protein

response to nutrient

cholesterol efflux

cholesterol efflux

very-low-density lipoprotein particle

low-density lipoprotein particle

discoidal high-density lipoprotein particle

spherical high-density lipoprotein particle

high-density lipoprotein particle remodeling

high-density lipoprotein particle assembly

high-density lipoprotein particle clearance

lipoprotein metabolic process

cholesterol homeostasis

protein complex

reverse cholesterol transport

NF-kappaB binding

negative regulation of lipoprotein lipid oxidation

 
211081_s_at -0.472 3.392 -2.911 1.062e-02 0.222 -2.736 MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 14 -49954992 Z25426 14q11.2-q21 Hs.130491 14

nucleotide binding

protein serine/threonine kinase activity

small GTPase regulator activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

response to stress

protein kinase cascade

activation of JUN kinase activity

transferase activity

 
1552722_at -0.506 3.196 -2.911 1.062e-02 0.222 -2.736 ARPP-21 cyclic AMP-regulated phosphoprotein, 21 kD 3 35658852, 35696119, 35697432 NM_016300 3p22.3 Hs.475902 Hs.713605 7

molecular_function

nucleic acid binding

cellular_component

cytoplasm

biological_process

 
202089_s_at -0.689 5.649 -2.911 1.063e-02 0.222 -2.736 SLC39A6 solute carrier family 39 (zinc transporter), member 6 18 -31944960, -31942491 NM_012319 18q12.2 Hs.719277 13

endoplasmic reticulum

plasma membrane

ion transport

zinc ion transport

zinc ion binding

integral to membrane

metal ion transport

metal ion transmembrane transporter activity

 
226723_at -0.531 6.985 -2.911 1.063e-02 0.222 -2.737 CCDC23 coiled-coil domain containing 23 1 -43045309 AI581511 1p34.2 Hs.113919 4    
228746_s_at -0.656 8.292 -2.910 1.066e-02 0.223 -2.739 CDV3 CDV3 homolog (mouse) 3 134775123, 134775990 AV646549 3q22.1 Hs.518265 11

molecular_function

cellular_component

cytoplasm

cell proliferation

 
1559190_s_at 0.552 5.767 2.910 1.066e-02 0.223 -2.739 RDH13 retinol dehydrogenase 13 (all-trans/9-cis) 19 -60247503, -60247503 AL833150 19q13.42 Hs.327631 9

binding

oxidoreductase activity

oxidation reduction

 
226012_at -0.489 6.994 -2.909 1.067e-02 0.223 -2.740 ANKRD11 ankyrin repeat domain 11 16 -87861535 AI686514 16q24.3 Hs.335003 8

nucleus

 
228977_at -1.121 7.946 -2.909 1.067e-02 0.223 -2.740 LOC729680 hypothetical protein LOC729680 13   AI669535 13q12.11 Hs.130652 1    
218521_s_at -0.850 6.304 -2.909 1.067e-02 0.223 -2.740 UBE2W ubiquitin-conjugating enzyme E2W (putative) 8 -74865393 NM_018299 8q21.11 Hs.597486 7

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

207711_at 0.351 4.588 2.909 1.067e-02 0.223 -2.740 C20orf117 chromosome 20 open reading frame 117 20 -34839258 NM_015377 20q11.23 Hs.460807 Hs.719179 8    
234486_at 0.445 5.275 2.908 1.069e-02 0.223 -2.741 OR51B2 olfactory receptor, family 51, subfamily B, member 2 11 -5301103 AF137396 11p15 Hs.680163 4

receptor activity

olfactory receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

sensory perception of smell

integral to membrane

response to stimulus

Olfactory transduction

212150_at -0.615 8.492 -2.908 1.069e-02 0.223 -2.742 EFR3A EFR3 homolog A (S. cerevisiae) 8 132985540 AA805651 8q24.22 Hs.204564 4

binding

plasma membrane

 
209061_at -0.595 7.687 -2.908 1.070e-02 0.223 -2.742 NCOA3 nuclear receptor coactivator 3 20 45564063 AI761748 20q12 Hs.592142 140

transcription coactivator activity

histone acetyltransferase activity

signal transducer activity

nucleus

cytoplasm

signal transduction

acyltransferase activity

transferase activity

androgen receptor signaling pathway

transcription regulator activity

positive regulation of transcription, DNA-dependent

thyroid hormone receptor binding

protein N-terminus binding

androgen receptor binding

 
222448_s_at -0.569 7.474 -2.908 1.070e-02 0.223 -2.742 CMPK1 cytidine monophosphate (UMP-CMP) kinase 1, cytosolic 1 47572055 AF112216 1p32 Hs.714325 16

nucleotide binding

cytidylate kinase activity

uridine kinase activity

ATP binding

nucleus

cytoplasm

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

pyrimidine ribonucleotide biosynthetic process

transferase activity

phosphotransferase activity, phosphate group as acceptor

Pyrimidine metabolism

Metabolic pathways

238647_at -0.607 5.084 -2.908 1.070e-02 0.223 -2.742 C14orf28 chromosome 14 open reading frame 28 14 44436256 AA496213 14q21.2 Hs.82098 3    
229439_s_at 0.386 5.334 2.907 1.071e-02 0.223 -2.743 RBM47 RNA binding motif protein 47 4 -40120028, -40120028 AI830823 4p13-p12 Hs.518727 4

RNA binding

nucleus

 
206867_at 0.317 5.045 2.907 1.072e-02 0.223 -2.744 GCKR glucokinase (hexokinase 4) regulator 2 27573209 NM_001486 2p23 Hs.89771 41

protein import into nucleus, translocation

cellular glucose homeostasis

enzyme inhibitor activity

protein binding

nucleus

nucleoplasm

cytosol

 
216512_s_at 0.315 4.479 2.907 1.072e-02 0.223 -2.744 DCT dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2) 13 -93889841 AL139318 13q32 Hs.301865 41

dopachrome isomerase activity

copper ion binding

microsome

cytosol

melanin biosynthetic process from tyrosine

metabolic process

zinc ion binding

epidermis development

membrane

integral to membrane

oxidoreductase activity

isomerase activity

melanosome

metal ion binding

pigmentation during development

cell development

Tyrosine metabolism

Metabolic pathways

Melanogenesis

210378_s_at -0.270 7.301 -2.907 1.072e-02 0.223 -2.744 SSNA1 Sjogren syndrome nuclear autoantigen 1 9 139202874 BC004118 9q34.3 Hs.530314 6

nucleus

centrosome

identical protein binding

 
230721_at 0.382 5.654 2.905 1.076e-02 0.223 -2.747 C16orf52 chromosome 16 open reading frame 52 16 21927030 BF436957 16p12.2 Hs.498890 3    
212461_at -0.394 8.606 -2.904 1.078e-02 0.223 -2.749 AZIN1 antizyme inhibitor 1 8 -103907711 BF793951 8q22.3 Hs.459106 10

catalytic activity

protein binding

polyamine biosynthetic process

ornithine decarboxylase inhibitor activity

ornithine decarboxylase activator activity

 
227456_s_at 0.386 8.877 2.904 1.078e-02 0.223 -2.749 C6orf136 chromosome 6 open reading frame 136 6 30722794, 2063373, 1861669 BF224092 6p21.33 Hs.591787 7    
226533_at -0.610 6.519 -2.903 1.080e-02 0.224 -2.751 HINT3 histidine triad nucleotide binding protein 3 6 126319553 BF694956 6q22.32 Hs.72325 6

nucleus

cytoplasm

hydrolase activity

 
238648_at 0.335 4.713 2.903 1.081e-02 0.224 -2.751 FLJ42291 hypothetical LOC346547 7   BE671597 7q36.2        
218403_at -0.373 9.088 -2.903 1.081e-02 0.224 -2.752 TRIAP1 TP53 regulated inhibitor of apoptosis 1 12 -119366146 NM_016399 12q24.31 Hs.69499 7

protein binding

cytoplasm

mitochondrion

apoptosis

anti-apoptosis

DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest

caspase inhibitor activity

perinuclear region of cytoplasm

 
221577_x_at 1.988 4.455 2.903 1.081e-02 0.224 -2.752 GDF15 growth differentiation factor 15 19 18357967 AF003934 19p13.11 Hs.616962 77

cytokine activity

extracellular region

extracellular space

signal transduction

transforming growth factor beta receptor signaling pathway

cell-cell signaling

growth factor activity

 
220241_at -0.524 3.100 -2.902 1.082e-02 0.224 -2.752 TMCO3 transmembrane and coiled-coil domains 3 13 113193308 NM_017905 13q34 Hs.317593 6

cation transport

antiporter activity

solute:hydrogen antiporter activity

membrane

integral to membrane

 
215546_at 0.432 4.404 2.902 1.083e-02 0.224 -2.753 PSMD5 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 9 -122618152 AK001065 9q33.2 Hs.193725 39

proteasome complex

binding

cytosol

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

 
204026_s_at -0.408 4.881 -2.902 1.083e-02 0.224 -2.753 ZWINT ZW10 interactor 10 -57787204 NM_007057 10q21-q22 Hs.591363 17

mitotic sister chromatid segregation

condensed chromosome kinetochore

nucleus

cell cycle

spindle organization

mitotic cell cycle checkpoint

protein N-terminus binding

phosphoinositide-mediated signaling

cell division

establishment of localization in cell

 
204022_at -0.407 6.298 -2.901 1.084e-02 0.224 -2.754 WWP2 WW domain containing E3 ubiquitin protein ligase 2 16 68353774, 68353774, 68516401 AI668780 16q22.1 Hs.408458 20

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

intracellular

protein modification process

negative regulation of gene expression

protein ubiquitination

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

negative regulation of transporter activity

interspecies interaction between organisms

entry of virus into host cell

negative regulation of protein transport

Ubiquitin mediated proteolysis

210347_s_at 0.354 3.668 2.900 1.086e-02 0.224 -2.756 BCL11A B-cell CLL/lymphoma 11A (zinc finger protein) 2 -60537832, -60531805 AF080216 2p16.1 Hs.370549 26

nucleic acid binding

intracellular

nucleus

cytoplasm

zinc ion binding

hemopoiesis

regulation of transcription

metal ion binding

 
217992_s_at 0.326 5.492 2.900 1.086e-02 0.224 -2.756 EFHD2 EF-hand domain family, member D2 1 15608977 NM_024329 1p36.21 Hs.465374 8

calcium ion binding

protein binding

 
233438_at 0.460 4.141 2.899 1.090e-02 0.224 -2.759 C6orf162 chromosome 6 open reading frame 162 6 88089024 AK024130 6q15-q16.1 Hs.70769 4

membrane

integral to membrane

 
213744_at -0.476 4.784 -2.899 1.090e-02 0.224 -2.759 ATRNL1 attractin-like 1 10 116843113 AI817331 10q26 Hs.501127 3

binding

sugar binding

membrane

integral to membrane

 
46323_at 0.376 6.002 2.899 1.090e-02 0.224 -2.759 CANT1 calcium activated nucleotidase 1 17 -74499392 AL120741 17q25.3 Hs.8859 13

signal transducer activity

calcium ion binding

endoplasmic reticulum

Golgi apparatus

membrane

integral to membrane

hydrolase activity

nucleoside-diphosphatase activity

positive regulation of I-kappaB kinase/NF-kappaB cascade

Purine metabolism

Pyrimidine metabolism

215368_at -0.644 8.289 -2.898 1.091e-02 0.224 -2.760 NEB nebulin 2 -152050098 R78299 2q22 Hs.588655 32

actin binding

protein binding

cytoplasm

somatic muscle development

structural constituent of muscle

actin cytoskeleton

sarcomere

Z disc

regulation of actin filament length

 
235106_at 0.451 3.272 2.898 1.091e-02 0.224 -2.760 MAML2 mastermind-like 2 (Drosophila) 11 -95351087 AW847318 11q21 Hs.428214 17

transcription coactivator activity

nucleus

Notch signaling pathway

nuclear speck

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

Notch signaling pathway

237793_at 0.413 4.363 2.898 1.092e-02 0.225 -2.761 LOC100128496 similar to chromosome 20 open reading frame 78 20   AW118618 20p11.23 Hs.664484      
205037_at 0.380 6.350 2.897 1.095e-02 0.225 -2.763 RABL4 RAB, member of RAS oncogene family-like 4 22 -35484200 NM_006860 22q13.1 Hs.415172 6

nucleotide binding

GTP binding

small GTPase mediated signal transduction

 
208633_s_at -0.517 6.467 -2.896 1.095e-02 0.225 -2.763 MACF1 microtubule-actin crosslinking factor 1 1 39319704, 39569396 W61052 1p32-p31 Hs.580782 25

calcium ion binding

calcium ion binding

protein binding

cytoplasm

cytoplasm

cytoskeleton

cytoskeleton

cell cycle arrest

microtubule binding

biological_process

actin filament binding

 
218191_s_at -0.626 8.686 -2.896 1.097e-02 0.225 -2.765 LMBRD1 LMBR1 domain containing 1 6 -70442469 NM_018368 6q13 Hs.271643 9

lysosome

transport

membrane

integral to membrane

cobalamin binding

interspecies interaction between organisms

cobalt ion binding

 
230040_at 0.769 3.671 2.895 1.099e-02 0.226 -2.766 ADAMTS18 ADAM metallopeptidase with thrombospondin type 1 motif, 18 16 -75873525 AI733120 16q23 Hs.188746 9

metalloendopeptidase activity

extracellular region

proteinaceous extracellular matrix

proteolysis

peptidase activity

zinc ion binding

metal ion binding

 
206538_at -0.512 6.518 -2.895 1.099e-02 0.226 -2.766 MRAS muscle RAS oncogene homolog 3 139549314, 139550197 NM_012219 3q22.3 Hs.527021 18

nucleotide binding

GTPase activity

GTP binding

intracellular

plasma membrane

Ras protein signal transduction

multicellular organismal development

muscle organ development

actin cytoskeleton organization

GTP-dependent protein binding

MAPK signaling pathway

Tight junction

Regulation of actin cytoskeleton

203935_at -0.640 7.479 -2.893 1.102e-02 0.226 -2.769 ACVR1 activin A receptor, type I 2 -158301204, -158301204 NM_001105 2q23-q24 Hs.470316 53

G1/S transition of mitotic cell cycle

nucleotide binding

magnesium ion binding

patterning of blood vessels

urogenital system development

in utero embryonic development

gastrulation with mouth forming second

mesoderm formation

neural crest cell migration

acute inflammatory response

receptor activity

ATP binding

protein amino acid phosphorylation

transforming growth factor beta receptor signaling pathway

germ cell development

determination of left/right symmetry

mesoderm development

heart development

embryonic development

membrane

activin receptor activity, type I

transferase activity

manganese ion binding

regulation of ossification

positive regulation of bone mineralization

BMP signaling pathway

negative regulation of activin receptor signaling pathway

protein homodimerization activity

negative regulation of apoptosis

apical part of cell

positive regulation of osteoblast differentiation

positive regulation of transcription

SMAD binding

activin receptor complex

follistatin binding

activin binding

regulation of skeletal muscle tissue development

transforming growth factor beta binding

smooth muscle cell differentiation

pharyngeal system development

Cytokine-cytokine receptor interaction

TGF-beta signaling pathway

231114_at 0.673 2.627 2.893 1.102e-02 0.226 -2.769 SPATA22 spermatogenesis associated 22 17 -3290063 BF438413 17p13.3 Hs.351068 3    
1567410_at 0.295 6.402 2.893 1.103e-02 0.226 -2.770 ZNF135 zinc finger protein 135 19 63262423 X65231 19q13.4 Hs.85863 6

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
220201_at -0.379 5.261 -2.892 1.105e-02 0.226 -2.772 RC3H2 ring finger and CCCH-type zinc finger domains 2 9 -124655844, -124651552 NM_018835 9q34 Hs.533499 6

DNA binding

protein binding

membrane fraction

cytoplasm

biological_process

zinc ion binding

cell surface

membrane

metal ion binding

perinuclear region of cytoplasm

 
218160_at 0.473 10.633 2.892 1.105e-02 0.226 -2.772 NDUFA8 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa 9 -123946158 NM_014222 9q33.2-q34.11 Hs.495039 12

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

transport

NADH dehydrogenase (ubiquinone) activity

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

228785_at -0.464 7.557 -2.892 1.106e-02 0.226 -2.772 ZNF281 zinc finger protein 281 1 -198642042 AA121673 1q32.1 Hs.59757 5

negative regulation of transcription from RNA polymerase II promoter

DNA binding

specific RNA polymerase II transcription factor activity

intracellular

nucleus

DNA-directed RNA polymerase II, core complex

zinc ion binding

regulation of transcription

metal ion binding

 
224674_at 0.316 6.640 2.891 1.106e-02 0.226 -2.772 TTYH3 tweety homolog 3 (Drosophila) 7 2638128 AI934753 7p22 Hs.440899 5

ion channel activity

chloride channel activity

calcium ion binding

plasma membrane

ion transport

integral to membrane

chloride ion binding

chloride channel complex

 
202822_at 0.536 7.884 2.891 1.107e-02 0.226 -2.773 LPP LIM domain containing preferred translocation partner in lipoma 3 189413414 BF221852 3q28 Hs.444362 30

molecular_function

protein binding

cellular_component

nucleus

cytoplasm

plasma membrane

focal adhesion

cell adhesion

biological_process

zinc ion binding

cell junction

metal ion binding

 
200977_s_at -0.530 9.292 -2.890 1.109e-02 0.227 -2.774 TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 7 27746262 AF090891 7p15 Hs.34576 21

intracellular

apoptosis

anti-apoptosis

zinc ion binding

identical protein binding

 
212785_s_at -0.425 7.489 -2.890 1.109e-02 0.227 -2.775 LARP7 La ribonucleoprotein domain family, member 7 4 113777568, 113778060 AA160181 4q25 Hs.713663 11

nucleotide binding

RNA binding

nucleus

nucleoplasm

cytoplasm

Golgi apparatus

RNA processing

ribonucleoprotein complex

 
229650_s_at -0.301 6.526 -2.890 1.110e-02 0.227 -2.775 C19orf42 chromosome 19 open reading frame 42 19 -16617958 BG538931 19p13.11 Hs.356467 1

membrane

integral to membrane

 
1564463_at 0.444 5.465 2.890 1.110e-02 0.227 -2.776 LOC283711 hypothetical protein LOC283711 15   AK093758 15q13.3 Hs.585100 1    
201504_s_at -0.465 6.247 -2.890 1.110e-02 0.227 -2.776 TSN translin 2 122229590 AI435302 2q21.1 Hs.75066 28

nucleus

cytoplasm

DNA recombination

sequence-specific DNA binding

 
206492_at 0.705 5.547 2.889 1.113e-02 0.227 -2.778 FHIT fragile histidine triad gene 3 -59710075 NM_002012 3p14.2 Hs.715588 Hs.715597 164

magnesium ion binding

protein binding

cytoplasm

DNA replication

nucleotide metabolic process

hydrolase activity

manganese ion binding

bis(5'-adenosyl)-triphosphatase activity

Purine metabolism

Small cell lung cancer

Non-small cell lung cancer

212643_at -0.360 8.572 -2.888 1.114e-02 0.227 -2.779 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1-like 14 54588114 AI671747 14q22.3 Hs.594338 Hs.619374 8    
231582_at 0.527 3.789 2.887 1.116e-02 0.227 -2.780 FLJ23834 hypothetical protein FLJ23834 7 105390892 BE467322 7q22.3 Hs.150120 4

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

 
216893_s_at -1.022 4.069 -2.886 1.118e-02 0.228 -2.782 COL4A3 collagen, type IV, alpha 3 (Goodpasture antigen) 2 227737524 U02519 2q36-q37 Hs.570065 77

integrin binding

integrin binding

extracellular matrix structural constituent

protein binding

extracellular region

collagen

collagen type IV

induction of apoptosis

activation of caspase activity

cell adhesion

cell surface receptor linked signal transduction

sensory perception of sound

blood circulation

metalloendopeptidase inhibitor activity

negative regulation of cell proliferation

negative regulation of angiogenesis

 
203460_s_at -0.455 5.881 -2.886 1.119e-02 0.228 -2.783 PSEN1 presenilin 1 14 72672895 NM_007318 14q24.3 Hs.3260 386

kinetochore

endopeptidase activity

membrane fraction

integral to nuclear inner membrane

nuclear outer membrane

mitochondrion

endoplasmic reticulum

Golgi apparatus

integral to plasma membrane

membrane protein ectodomain proteolysis

apoptosis

anti-apoptosis

chromosome segregation

Notch receptor processing

intracellular signaling cascade

beta-catenin binding

cell death

peptidase activity

cell surface

membrane

cell-cell adhesion

protein processing

PDZ domain binding

endoplasmic reticulum calcium ion homeostasis

regulation of phosphorylation

amyloid precursor protein catabolic process

positive regulation of catalytic activity

Wnt signaling pathway

Notch signaling pathway

Neurotrophin signaling pathway

Alzheimer's disease

236381_s_at -0.618 5.023 -2.885 1.121e-02 0.228 -2.784 WDR8 WD repeat domain 8 1 -3537191 AW572779 1p36.3 Hs.31714 8

protein binding

cytoplasm

 
226183_at -0.360 6.525 -2.885 1.122e-02 0.228 -2.785 GSK3B glycogen synthase kinase 3 beta 3 -121023493 AW139538 3q13.3 Hs.445733 Hs.593022 373

nucleotide binding

re-entry into mitotic cell cycle

p53 binding

glycogen synthase kinase 3 activity

ATP binding

nucleus

cytoplasm

cytosol

cytosol

glycogen metabolic process

anti-apoptosis

response to stress

ER overload response

intracellular signaling cascade

beta-catenin binding

organ morphogenesis

transferase activity

peptidyl-serine phosphorylation

growth cone

beta-catenin destruction complex

positive regulation of protein complex assembly

protein kinase A catalytic subunit binding

Axin-APC-beta-catenin-GSK3B complex

cell soma

dendritic shaft

membrane-bounded organelle

fat cell differentiation

positive regulation of protein export from nucleus

tau-protein kinase activity

NF-kappaB binding

Wnt receptor signaling pathway through beta-catenin

ErbB signaling pathway

Chemokine signaling pathway

Cell cycle

Wnt signaling pathway

Hedgehog signaling pathway

Axon guidance

Focal adhesion

T cell receptor signaling pathway

B cell receptor signaling pathway

Neurotrophin signaling pathway

Insulin signaling pathway

Melanogenesis

Alzheimer's disease

Pathways in cancer

Colorectal cancer

Endometrial cancer

Prostate cancer

Basal cell carcinoma

203116_s_at -0.300 7.941 -2.884 1.124e-02 0.228 -2.786 FECH ferrochelatase (protoporphyria) 18 -53363070 NM_000140 18q21.3 Hs.365365 61

ferrochelatase activity

ferrochelatase activity

protein binding

mitochondrion

mitochondrial inner membrane

mitochondrial matrix

generation of precursor metabolites and energy

heme biosynthetic process

ferrous iron binding

response to light stimulus

detection of UV

membrane

protoporphyrinogen IX metabolic process

metal ion binding

2 iron, 2 sulfur cluster binding

Porphyrin and chlorophyll metabolism

Metabolic pathways

232524_x_at -0.423 6.754 -2.884 1.124e-02 0.228 -2.787 ANAPC4 anaphase promoting complex subunit 4 4 24987945 AK001881 4p15.2 Hs.152173 21

G2/M transition of mitotic cell cycle

mitotic anaphase

ubiquitin-protein ligase activity

nucleoplasm

anaphase-promoting complex

cytosol

ubiquitin-dependent protein catabolic process

cell cycle

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

cell division

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

228463_at 0.327 3.830 2.883 1.124e-02 0.228 -2.787 FOXA3 forkhead box A3 19 51059357 R99562 19q13.2-q13.4 Hs.36137 14

cellular glucose homeostasis

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

cellular response to starvation

sequence-specific DNA binding

Maturity onset diabetes of the young

1566149_at 0.245 5.226 2.883 1.125e-02 0.228 -2.788 CALML4 calmodulin-like 4 15 -66270096 AK096198 15q23 Hs.709550 4

calcium ion binding

 
226071_at 0.820 4.909 2.883 1.125e-02 0.228 -2.788 ADAMTSL4 ADAMTS-like 4 1 148788521, 148788521 AF217974 1q21.3 Hs.516243 16

protease binding

metalloendopeptidase activity

protein binding

extracellular region

peptidase activity

extracellular matrix

positive regulation of apoptosis

 
226284_at -0.643 5.152 -2.883 1.126e-02 0.228 -2.789 ZBTB2 zinc finger and BTB domain containing 2 6 -151726942 BF111616 6q25.1 Hs.520073 6

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
218129_s_at -0.660 6.516 -2.882 1.128e-02 0.229 -2.790 NFYB nuclear transcription factor Y, beta 12 -103034987 NM_006166 12q22-q23 Hs.84928 38

transcription factor activity

protein binding

intracellular

nucleus

CCAAT-binding factor complex

sequence-specific DNA binding

positive regulation of transcription, DNA-dependent

Antigen processing and presentation

223145_s_at -0.501 8.565 -2.881 1.130e-02 0.229 -2.792 AKIRIN2 akirin 2 6 -88441298 BC000764 6q15 Hs.485915 10

protein binding

nucleus

embryonic development

transcriptional repressor complex

response to lipopolysaccharide

positive regulation of interleukin-6 production

innate immune response

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

 
37424_at 0.310 6.411 2.880 1.132e-02 0.229 -2.793 CCHCR1 coiled-coil alpha-helical rod protein 1 6 -31218194, -31218194, -2561482, -2561482, -2359996, -2359996 AB029343 6p21.3 Hs.485075 23

protein binding

nucleus

cytoplasm

protein export from nucleus

multicellular organismal development

cell differentiation

 
218899_s_at 0.523 3.636 2.880 1.132e-02 0.229 -2.793 BAALC brain and acute leukemia, cytoplasmic 8 104222096 NM_024812 8q22.3 Hs.533446 11

cytoplasm

membrane

 
230150_at -0.451 5.665 -2.880 1.132e-02 0.229 -2.793 BCAP29 B-cell receptor-associated protein 29 7 107007657, 107008439 N57499 7q22-q31 Hs.303787 12

endoplasmic reticulum

intracellular protein transport

apoptosis

membrane

integral to membrane

vesicle-mediated transport

 
218310_at -0.444 7.602 -2.880 1.132e-02 0.229 -2.793 RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 7 65843077 NM_014504 7q11.21 Hs.530053 20

DNA binding

protein binding

cytoplasm

early endosome

endocytosis

zinc ion binding

protein transport

modification-dependent protein catabolic process

metal ion binding

recycling endosome

 
213248_at 0.292 3.705 2.879 1.133e-02 0.229 -2.794 LOC730101 hypothetical LOC730101 6 52637157 AL577024 6p12.2 Hs.7921 2    
201878_at -0.566 7.485 -2.879 1.134e-02 0.229 -2.795 ARIH1 ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila) 15 70553720 N25546 15q24 Hs.268787 11

ubiquitin ligase complex

protein binding

cytoplasm

ubiquitin-dependent protein catabolic process

zinc ion binding

small conjugating protein ligase activity

metal ion binding

 
225426_at -0.886 8.192 -2.879 1.135e-02 0.229 -2.795 PPP6C protein phosphatase 6, catalytic subunit 9 -126948672 AW195360 9q33.3 Hs.715605 16

G1/S transition of mitotic cell cycle

protein serine/threonine phosphatase activity

iron ion binding

protein binding

cytoplasm

cytosol

protein amino acid dephosphorylation

cell cycle

hydrolase activity

manganese ion binding

metal ion binding

 
1556285_s_at 0.309 8.790 2.879 1.135e-02 0.229 -2.796 PPA2 pyrophosphatase (inorganic) 2 4 -106509682 AF086012 4q25 Hs.654957 13

magnesium ion binding

inorganic diphosphatase activity

cytoplasm

mitochondrion

phosphate metabolic process

hydrolase activity

Oxidative phosphorylation

231775_at 0.328 5.075 2.878 1.137e-02 0.229 -2.797 TNFRSF10A tumor necrosis factor receptor superfamily, member 10a 8 -23104914 W65310 8p21 Hs.591834 95

receptor activity

death receptor activity

induction of apoptosis

activation of caspase activity

signal transduction

activation of NF-kappaB-inducing kinase activity

transcription factor binding

induction of apoptosis via death domain receptors

caspase activator activity

membrane

integral to membrane

TRAIL binding

Cytokine-cytokine receptor interaction

Apoptosis

Natural killer cell mediated cytotoxicity

204263_s_at 0.567 6.825 2.878 1.137e-02 0.229 -2.798 CPT2 carnitine palmitoyltransferase 2 1 53434688 M58581 1p32 Hs.713535 53

carnitine O-palmitoyltransferase activity

carnitine O-palmitoyltransferase activity

mitochondrion

mitochondrial inner membrane

mitochondrial inner membrane

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

transport

carnitine shuttle

acyltransferase activity

membrane

transferase activity

regulation of fatty acid oxidation

Fatty acid metabolism

PPAR signaling pathway

241533_at 0.303 5.388 2.877 1.139e-02 0.229 -2.799 LOC731656 hypothetical LOC731656 1   AV652367   Hs.702477 1    
213508_at -0.568 7.095 -2.877 1.139e-02 0.229 -2.799 C14orf147 chromosome 14 open reading frame 147 14 -33971894 AA142942 14q13.1 Hs.269909 5

serine C-palmitoyltransferase activity

protein binding

endoplasmic reticulum

membrane

integral to membrane

serine C-palmitoyltransferase complex

sphingolipid biosynthetic process

 
1555996_s_at -0.668 3.768 -2.877 1.140e-02 0.229 -2.800 EIF4A2 eukaryotic translation initiation factor 4A, isoform 2 3 187984054 AI332397 3q28 Hs.518475 Hs.599481 15

nucleotide binding

RNA binding

translation initiation factor activity

helicase activity

protein binding

ATP binding

cytosol

translation

regulation of translational initiation

ATP-dependent helicase activity

eukaryotic translation initiation factor 4F complex

hydrolase activity

interspecies interaction between organisms

 
1565823_at -0.375 3.155 -2.877 1.140e-02 0.229 -2.800 SEPT7 septin 7 7 35807151 BF855173 7p14.3-p14.1 Hs.191346 Hs.642540 23

nucleotide binding

condensed chromosome kinetochore

cytokinesis

stress fiber

structural molecule activity

protein binding

GTP binding

nucleus

cytoplasm

spindle

cell cycle

mitosis

septin complex

protein heterooligomerization

 
224883_at -0.680 6.155 -2.877 1.140e-02 0.229 -2.800 PLDN pallidin homolog (mouse) 15 43666708 AI344311 15q21.1 Hs.719102 17

cellular_component

cytoplasm

endosome

membrane fusion

blood coagulation

membrane

synaptic vesicle docking during exocytosis

melanocyte differentiation

syntaxin-13 binding

positive regulation of natural killer cell activation

secretion of lysosomal enzymes

identical protein binding

pigmentation

 
1556283_s_at -0.388 4.937 -2.877 1.140e-02 0.229 -2.800 FGFR1OP2 FGFR1 oncogene partner 2 12 26982582 W74643 12p11.23 Hs.591162 5

cytoplasm

 
205084_at -0.656 5.876 -2.876 1.140e-02 0.229 -2.800 BCAP29 B-cell receptor-associated protein 29 7 107007657, 107008439 NM_018844 7q22-q31 Hs.303787 12

endoplasmic reticulum

intracellular protein transport

apoptosis

membrane

integral to membrane

vesicle-mediated transport

 
208743_s_at -0.418 8.034 -2.876 1.141e-02 0.229 -2.800 YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide 20 42947757 BC001359 20q13.1 Hs.643544 109

cytoplasm

cytosol

protein targeting

Ras protein signal transduction

activation of pro-apoptotic gene products

enzyme binding

protein domain specific binding

negative regulation of protein amino acid dephosphorylation

melanosome

positive regulation of catalytic activity

perinuclear region of cytoplasm

Cell cycle

Neurotrophin signaling pathway

218526_s_at -0.477 6.841 -2.876 1.141e-02 0.229 -2.801 RANGRF RAN guanine nucleotide release factor 17 8132713 NM_014185 17p13 Hs.408233 6

guanyl-nucleotide exchange factor activity

nucleus

cytoplasm

protein transport

 
230384_at -0.884 7.912 -2.876 1.142e-02 0.229 -2.801 ANKRD23 ankyrin repeat domain 23 2 -96867377 AI866797 2q11.2 Hs.643430 8

nucleus

 
202745_at -0.337 7.270 -2.876 1.142e-02 0.229 -2.802 USP8 ubiquitin specific peptidase 8 15 48503870 NM_005154 15q21.2 Hs.644563 25

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

protein binding

ubiquitin-dependent protein catabolic process

peptidase activity

cell proliferation

SH3 domain binding

Endocytosis

201101_s_at -1.121 7.205 -2.873 1.148e-02 0.230 -2.806 BCLAF1 BCL2-associated transcription factor 1 6 -136619693 BE963370 6q22-q23 Hs.486542 16

DNA binding

protein binding

nucleus

cytoplasm

induction of apoptosis

negative regulation of transcription

transcription repressor activity

 
228244_at 0.255 5.084 2.873 1.148e-02 0.230 -2.806 BLOC1S3 biogenesis of lysosomal organelles complex-1, subunit 3 19 50373842 BF062383 19q13.32 Hs.103902 Hs.719016 7

eye development

molecular_function

cytoplasm

cytosol

platelet activation

BLOC-1 complex

BLOC-1 complex

melanosome organization

positive regulation of natural killer cell activation

secretion of lysosomal enzymes

response to drug

identical protein binding

pigmentation during development

platelet dense granule organization

 
226581_at -0.437 7.558 -2.872 1.150e-02 0.230 -2.808 ZFYVE20 zinc finger, FYVE domain containing 20 3 -15086583 AA524034 3p25.1 Hs.475565 Hs.706478 9

intracellular

endosome

plasma membrane

zinc ion binding

protein transport

endosome transport

metal ion binding

Endocytosis

223756_at -0.390 4.820 -2.872 1.151e-02 0.230 -2.808 KIAA1310 KIAA1310 2 -96622633 AL136849 2p12-p11.2 Hs.516341 10    
206542_s_at -0.621 8.391 -2.872 1.151e-02 0.230 -2.808 SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 9 2005341 AV725365 9p22.3 Hs.298990 63

nucleotide binding

DNA binding

transcription coactivator activity

helicase activity

protein binding

ATP binding

nucleus

nucleoplasm

chromatin remodeling

regulation of transcription from RNA polymerase II promoter

DNA-dependent ATPase activity

positive regulation of specific transcription from RNA polymerase II promoter

negative regulation of specific transcription from RNA polymerase II promoter

SWI/SNF complex

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

 
227733_at 0.478 3.526 2.871 1.153e-02 0.231 -2.810 TMEM63C transmembrane protein 63C 14 76717854 AA928939 14q24.3 Hs.22452 3

membrane

integral to membrane

 
1553559_at 0.491 4.421 2.871 1.154e-02 0.231 -2.810 TMEM171 transmembrane protein 171 5 72452143 NM_173490 5q13.2 Hs.162246 5

membrane

integral to membrane

 
1558459_s_at -0.299 5.985 -2.870 1.154e-02 0.231 -2.811 LOC401320 hypothetical LOC401320 7   BC041636 7p15.1 Hs.561708 2    
212383_at -0.358 7.523 -2.870 1.156e-02 0.231 -2.812 ATP6V0A1 ATPase, H+ transporting, lysosomal V0 subunit a1 17 37864387 AL096733 17q21 Hs.463074 21

protein binding

cytoplasm

plasma membrane

ion transport

hydrogen ion transmembrane transporter activity

ATP synthesis coupled proton transport

proton transport

integral to membrane

cytoplasmic vesicle

proton-transporting two-sector ATPase complex, proton-transporting domain

melanosome

ATPase binding

Oxidative phosphorylation

Metabolic pathways

Lysosome

Vibrio cholerae infection

Epithelial cell signaling in Helicobacter pylori infection

237603_at 0.436 3.671 2.870 1.156e-02 0.231 -2.812 C1orf100 chromosome 1 open reading frame 100 1 242582559 AI122828 1q44 Hs.442703 3    
223583_at 0.387 5.061 2.869 1.157e-02 0.231 -2.813 TNFAIP8L2 tumor necrosis factor, alpha-induced protein 8-like 2 1 149395728 AF271774 1q21.3 Hs.709522 2

protein binding

innate immune response

 
211900_x_at 0.476 4.522 2.869 1.157e-02 0.231 -2.813 CD6 CD6 molecule 11 60495690 U66146 11q13 Hs.643167 22

scavenger receptor activity

protein binding

integral to plasma membrane

cell adhesion

cell surface

membrane

Cell adhesion molecules (CAMs)

222853_at -1.566 5.561 -2.869 1.159e-02 0.231 -2.814 FLRT3 fibronectin leucine rich transmembrane protein 3 20 -14252642, -14252642 N71923 20p11 Hs.41296 9

receptor signaling protein activity

proteinaceous extracellular matrix

integral to plasma membrane

cell adhesion

biological_process

membrane

protein binding, bridging

 
225551_at -0.865 7.161 -2.869 1.159e-02 0.231 -2.815 C1orf71 chromosome 1 open reading frame 71 1 244796261, 244796261 AW291187 1q44 Hs.368353 9

membrane

integral to membrane

protein complex

 
218176_at 0.308 6.626 2.868 1.159e-02 0.231 -2.815 MAGEF1 melanoma antigen family F, 1 3 -185910848 NM_022149 3q13 Hs.306123 4    
214771_x_at -0.342 9.344 -2.868 1.160e-02 0.231 -2.815 MPRIP myosin phosphatase Rho interacting protein 17 16886831, 16886831 AK025604 17p11.2 Hs.462341 16

actin binding

protein binding

cytoplasm

cytoskeleton

 
236860_at 1.176 6.851 2.868 1.161e-02 0.231 -2.816 NPY6R neuropeptide Y receptor Y6 (pseudogene) 5 137171360 BF968482 5q31 Hs.643466 Hs.713225 4

peptide YY receptor activity

receptor activity

G-protein coupled receptor activity

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

membrane

 
1552649_a_at -0.442 4.033 -2.867 1.161e-02 0.231 -2.817 RFFL ring finger and FYVE-like domain containing 1 17 -30360243, -30360243 NM_057178 17q12 Hs.13680 11

protein binding

cytoplasm

intracellular protein transport

apoptosis

zinc ion binding

membrane

cytoplasmic membrane-bounded vesicle

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
1553534_at 0.272 4.010 2.867 1.162e-02 0.231 -2.817 NLRP10 NLR family, pyrin domain containing 10 11 -7937731 NM_176821 11p15.4 Hs.449636 6

nucleotide binding

protein binding

ATP binding

 
219804_at -0.646 10.192 -2.867 1.163e-02 0.231 -2.818 SYNPO2L synaptopodin 2-like 10 -75074649, -75074649 NM_024875 10q22.2 Hs.645273 4

actin binding

protein binding

cytoplasm

cytoskeleton

 
217754_at -0.325 6.728 -2.867 1.163e-02 0.231 -2.818 DDX56 DEAD (Asp-Glu-Ala-Asp) box polypeptide 56 7 -44571927 NM_019082 7p13 Hs.654762 16

nucleotide binding

RNA binding

ATP-dependent RNA helicase activity

helicase activity

ATP binding

nucleus

nucleolus

rRNA processing

hydrolase activity

identical protein binding

 
219436_s_at 0.501 6.908 2.867 1.163e-02 0.231 -2.818 EMCN endomucin 4 -101535522 NM_016242 4q24 Hs.152913 12

extracellular region

plasma membrane

integral to membrane

 
222547_at -0.523 5.098 -2.867 1.164e-02 0.231 -2.818 MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 2 101680919 AL561281 2q11.2-q12 Hs.719073 22

nucleotide binding

protein serine/threonine kinase activity

small GTPase regulator activity

ATP binding

cellular_component

protein amino acid phosphorylation

response to stress

protein kinase cascade

transferase activity

MAPK signaling pathway

224751_at -0.542 8.277 -2.866 1.164e-02 0.231 -2.818 PL-5283 PL-5283 protein 7 134997760 BE738276 7q33 Hs.200022 3    
202651_at -0.569 6.046 -2.866 1.164e-02 0.231 -2.819 LPGAT1 lysophosphatidylglycerol acyltransferase 1 1 -209983422 NM_014873 1q32 Hs.497674 6

molecular_function

cytoplasm

endoplasmic reticulum

metabolic process

acyltransferase activity

phospholipid biosynthetic process

membrane

integral to membrane

transferase activity

 
235602_at 0.338 3.119 2.866 1.164e-02 0.231 -2.819 TP53INP1 tumor protein p53 inducible nuclear protein 1 8 -96007376 AI422387 8q22 Hs.492261 16

nucleus

apoptosis

 
213957_s_at -0.360 5.306 -2.866 1.165e-02 0.231 -2.819 CEP350 centrosomal protein 350kDa 1 178190530 AA635523 1p36.13-q41 Hs.413045 17

nucleus

centrosome

spindle

 
215942_s_at 0.343 5.282 2.866 1.165e-02 0.231 -2.819 GTSE1 G-2 and S-phase expressed 1 22 45071301 BF973178 22q13.2-q13.3 Hs.386189 18

G2 phase of mitotic cell cycle

molecular_function

cytoplasm

cytoplasmic microtubule

DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest

microtubule-based process

p53 signaling pathway

222764_at 0.715 5.550 2.866 1.166e-02 0.231 -2.820 ASRGL1 asparaginase like 1 11 61861349 AI928342 11q12.3 Hs.535326 9

N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity

cytoplasm

hydrolase activity

asparagine catabolic process via L-aspartate

Alanine, aspartate and glutamate metabolism

Cyanoamino acid metabolism

Nitrogen metabolism

Metabolic pathways

224861_at -0.429 6.278 -2.866 1.166e-02 0.231 -2.820 GNAQ guanine nucleotide binding protein (G protein), q polypeptide 9 -79525010 AA628423 9q21 Hs.269782 105

nucleotide binding

skeletal system development

regulation of action potential

GTPase activity

signal transducer activity

protein binding

GTP binding

membrane fraction

cytoplasm

plasma membrane

plasma membrane

protein amino acid ADP-ribosylation

signal transduction

G-protein coupled receptor protein signaling pathway

activation of adenylate cyclase activity by G-protein signaling pathway

activation of phospholipase C activity

glutamate signaling pathway

heart development

blood coagulation

behavior

post-embryonic development

neuron remodeling

guanyl nucleotide binding

forebrain neuron development

embryonic digit morphogenesis

regulation of melanocyte differentiation

pigmentation during development

activation of phospholipase C activity by dopamine receptor signaling pathway

Calcium signaling pathway

Vascular smooth muscle contraction

Gap junction

Long-term potentiation

Long-term depression

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Huntington's disease

225612_s_at -0.777 6.270 -2.865 1.167e-02 0.231 -2.821 B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 3 184453725 BE672260 3q28 Hs.718506 7

intracellular

Golgi apparatus

protein amino acid glycosylation

multicellular organismal development

central nervous system development

galactosyltransferase activity

beta-galactosyl-N-acetylglucosaminylgalactosylglucosyl-ceramide beta-1,3-acetylglucosaminyltransferase activity

lipopolysaccharide N-acetylglucosaminyltransferase activity

glycolipid biosynthetic process

membrane

integral to membrane

transferase activity, transferring glycosyl groups

Glycosphingolipid biosynthesis - lacto and neolacto series

Metabolic pathways

205930_at -0.531 6.681 -2.865 1.167e-02 0.231 -2.821 GTF2E1 general transcription factor IIE, polypeptide 1, alpha 56kDa 3 121944247 NM_005513 3q21-q24 Hs.445272 41

RNA polymerase II transcription factor activity

protein binding

nucleus

nucleoplasm

transcription factor TFIIE complex

transcription initiation from RNA polymerase II promoter

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

zinc ion binding

regulation of transcription

metal ion binding

Basal transcription factors

218077_s_at -0.465 5.205 -2.865 1.167e-02 0.231 -2.821 ZDHHC3 zinc finger, DHHC-type containing 3 3 -44931757 BE542551 3p21.31 Hs.61430 8

Golgi apparatus

zinc ion binding

acyltransferase activity

membrane

integral to membrane

transferase activity

metal ion binding

 
210592_s_at -0.486 7.644 -2.864 1.169e-02 0.231 -2.822 SAT1 spermidine/spermine N1-acetyltransferase 1 X 23711195 M55580 Xp22.1 Hs.28491 46

diamine N-acetyltransferase activity

protein binding

intracellular

cytoplasm

metabolic process

acyltransferase activity

transferase activity

Arginine and proline metabolism

Metabolic pathways

201713_s_at -0.397 9.152 -2.864 1.170e-02 0.231 -2.823 RANBP2 RAN binding protein 2 2 108702368 D42063 2q12.3 Hs.199561 Hs.715056 61

peptidyl-prolyl cis-trans isomerase activity

protein binding

intracellular

nucleus

nuclear pore

cytosol

protein folding

protein import into nucleus

zinc ion binding

Ran GTPase binding

protein transport

isomerase activity

modification-dependent protein catabolic process

metal ion binding

intracellular transport

mRNA transport

intracellular protein transmembrane transport

 
224333_s_at 0.450 8.570 2.864 1.170e-02 0.231 -2.823 MRPS5 mitochondrial ribosomal protein S5 2 -95116678 AB049940 2p11.2-q11.2 Hs.655259 9

RNA binding

structural constituent of ribosome

protein binding

intracellular

mitochondrion

ribosome

translation

 
208741_at -0.498 6.954 -2.863 1.171e-02 0.231 -2.824 SAP18 Sin3A-associated protein, 18kDa 13 20612652 AW274856 13q12.11 Hs.524899 17

histone deacetylase complex

transcription corepressor activity

protein binding

nucleus

cytoplasm

regulation of transcription from RNA polymerase II promoter

regulation of transcription

 
217071_s_at 0.312 5.981 2.863 1.171e-02 0.231 -2.824 MTHFR 5,10-methylenetetrahydrofolate reductase (NADPH) 1 -11768373 AJ249275 1p36.3 Hs.214142 1776

methylenetetrahydrofolate reductase (NADPH) activity

methylenetetrahydrofolate reductase (NADPH) activity

protein binding

cytosol

cellular amino acid metabolic process

methionine metabolic process

blood circulation

oxidoreductase activity

oxidation reduction

One carbon pool by folate

Methane metabolism

Metabolic pathways

229986_at 0.266 5.812 2.863 1.172e-02 0.231 -2.825 ZNF717 zinc finger protein 717 3 -75868718 AW205616 3p12.3 Hs.556877 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
206219_s_at 0.326 3.736 2.862 1.174e-02 0.232 -2.826 VAV1 vav 1 guanine nucleotide exchange factor 19 6723721 NM_005428 19p13.2 Hs.116237 134

transcription factor activity

guanyl-nucleotide exchange factor activity

protein binding

intracellular

phagocytosis

immune response

integrin-mediated signaling pathway

intracellular signaling cascade

zinc ion binding

diacylglycerol binding

Rac guanyl-nucleotide exchange factor activity

regulation of Rho protein signal transduction

T cell activation

regulation of GTPase activity

positive regulation of cell adhesion

metal ion binding

Chemokine signaling pathway

Focal adhesion

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

209378_s_at -0.449 6.963 -2.862 1.175e-02 0.232 -2.827 FAM190B family with sequence similarity 190, member B 10 86078389 AI478879 10q23.1 Hs.461988 5    
241402_at 0.286 5.777 2.861 1.176e-02 0.232 -2.828 TSEN54 tRNA splicing endonuclease 54 homolog (S. cerevisiae) 17 71024203 AA504269 17q25.1 Hs.655875 6

nucleus

nucleolus

tRNA splicing, via endonucleolytic cleavage and ligation

mRNA processing

 
212762_s_at 0.461 4.482 2.861 1.176e-02 0.232 -2.828 TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 10 114699998 AI375916 10q25.3 Hs.593995 246

blood vessel development

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

anti-apoptosis

cell cycle arrest

beta-catenin binding

transcription factor binding

cell proliferation

positive regulation of specific transcription from RNA polymerase II promoter

positive regulation of heparan sulfate proteoglycan biosynthetic process

specific transcriptional repressor activity

protein kinase binding

pancreas development

positive regulation of insulin secretion

regulation of hormone metabolic process

glucose homeostasis

fat cell differentiation

regulation of transcription

myoblast cell fate commitment

Wnt receptor signaling pathway through beta-catenin

beta-catenin-TCF7L2 complex

Wnt signaling pathway

Adherens junction

Melanogenesis

Pathways in cancer

Colorectal cancer

Endometrial cancer

Prostate cancer

Thyroid cancer

Basal cell carcinoma

Acute myeloid leukemia

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

1564536_at 0.440 7.078 2.861 1.178e-02 0.232 -2.829 ASB10 ankyrin repeat and SOCS box-containing 10 7 -150503717, -150503717 AK055536 7q36.1 Hs.647081 6

intracellular signaling cascade

modification-dependent protein catabolic process

 
1555278_a_at -0.460 6.539 -2.860 1.178e-02 0.232 -2.830 CKAP5 cytoskeleton associated protein 5 11 -46721659 BC035554 11p11.2 Hs.201253 16

gamma-tubulin complex

protein binding

centrosome

cell cycle

mitosis

microtubule cytoskeleton

establishment or maintenance of microtubule cytoskeleton polarity

RNA transport

centrosome organization

spindle pole body organization

cell division

 
204608_at 0.516 5.290 2.860 1.180e-02 0.232 -2.831 ASL argininosuccinate lyase 7 65178210, 65178268 NM_000048 7cen-q11.2 Hs.632015 19

urea cycle

argininosuccinate metabolic process

response to hypoxia

kidney development

liver development

argininosuccinate lyase activity

cytoplasm

arginine catabolic process

response to nutrient

locomotory behavior

cellular amino acid biosynthetic process

post-embryonic development

lyase activity

ammonia assimilation cycle

arginine biosynthetic process via ornithine

response to peptide hormone stimulus

response to steroid hormone stimulus

response to glucocorticoid stimulus

response to cAMP

Alanine, aspartate and glutamate metabolism

Arginine and proline metabolism

Metabolic pathways

217857_s_at -0.408 6.586 -2.859 1.181e-02 0.232 -2.832 RBM8A RNA binding motif protein 8A 1 144218994 NM_005105 1q12 Hs.356873 43

nucleotide binding

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

nuclear mRNA splicing, via spliceosome

mRNA binding

protein binding

nucleus

spliceosomal complex

cytoplasm

transport

biological_process

RNA splicing

nuclear speck

exon-exon junction complex

mRNA transport

 
1564190_x_at 0.431 4.303 2.859 1.182e-02 0.232 -2.832 ZNF519 zinc finger protein 519 18 -14094723 AK096748 18p11.21 Hs.352635 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
212189_s_at -0.467 7.333 -2.859 1.182e-02 0.232 -2.832 COG4 component of oligomeric golgi complex 4 16 -69071972 AK022874 16q22.1 Hs.208680 11

protein binding

Golgi apparatus

protein transport

membrane

Golgi transport complex

 
226635_at -0.621 7.121 -2.859 1.182e-02 0.232 -2.832 LOC401504 hypothetical gene supported by AK091718 9   BG170478 9p13.2 Hs.446271 2    
208926_at -0.409 6.480 -2.859 1.182e-02 0.232 -2.833 NEU1 sialidase 1 (lysosomal sialidase) 6 -31934807, -3273082, -3074566 U84246 6p21.3 Hs.520037 41

exo-alpha-sialidase activity

protein binding

plasma membrane

metabolic process

hydrolase activity, acting on glycosyl bonds

cytoplasmic vesicle

lysosomal lumen

Other glycan degradation

Sphingolipid metabolism

Lysosome

204663_at 0.351 7.408 2.857 1.185e-02 0.232 -2.835 ME3 malic enzyme 3, NADP(+)-dependent, mitochondrial 11 -85829799, -85829797, -85829797 NM_006680 11cen-q22.3 Hs.199743 8

malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity

mitochondrion

mitochondrial matrix

pyruvate metabolic process

malate metabolic process

oxygen and reactive oxygen species metabolic process

aerobic respiration

oxidoreductase activity

metal ion binding

cofactor binding

NAD or NADH binding

oxidation reduction

Pyruvate metabolism

Carbon fixation in photosynthetic organisms

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Metabolic pathways

222924_at -0.800 7.669 -2.857 1.186e-02 0.232 -2.835 SLMAP sarcolemma associated protein 3 57718213 BF526855 3p21.2-p14.3 Hs.476432 11

smooth endoplasmic reticulum

plasma membrane

integral to plasma membrane

protein folding

muscle contraction

prefoldin complex

unfolded protein binding

 
241393_at 0.448 6.009 2.857 1.186e-02 0.232 -2.835 IPP intracisternal A particle-promoted polypeptide 1 -45936995, -45932586 R78604 1p34-p32 Hs.699548 8

actin binding

protein binding

cytoplasm

actin cytoskeleton

 
203038_at -0.359 6.589 -2.857 1.186e-02 0.232 -2.835 PTPRK protein tyrosine phosphatase, receptor type, K 6 -128331617, -128331617 NM_002844 6q22.2-q22.3 Hs.155919 20

receptor activity

transmembrane receptor protein tyrosine phosphatase activity

plasma membrane

integral to plasma membrane

cell-cell junction

adherens junction

protein amino acid dephosphorylation

cell adhesion

signal transduction

transforming growth factor beta receptor signaling pathway

beta-catenin binding

cell surface

negative regulation of keratinocyte proliferation

negative regulation of transcription

hydrolase activity

protein kinase binding

negative regulation of cell migration

leading edge membrane

protein localization at cell surface

cellular response to reactive oxygen species

cellular response to UV

gamma-catenin binding

negative regulation of cell cycle

focal adhesion formation

 
208817_at -0.524 7.854 -2.857 1.186e-02 0.232 -2.836 COMT catechol-O-methyltransferase 22 18309262, 18318459, 18319044, 18330069 BC000419 22q11.21 22q11.21-q11.23 Hs.370408 Hs.704514 Hs.713616 742

magnesium ion binding

protein binding

soluble fraction

cytoplasm

microsome

cytosol

plasma membrane

catecholamine metabolic process

integral to membrane

catechol O-methyltransferase activity

catechol O-methyltransferase activity

transferase activity

neurotransmitter catabolic process

dopamine catabolic process

Tyrosine metabolism

Betalain biosynthesis

Metabolic pathways

229872_s_at -1.334 6.025 -2.857 1.186e-02 0.232 -2.836 LOC100132999 hypothetical protein LOC100132999 1   AA532655 1q21.2 Hs.670106      
222692_s_at -0.522 5.378 -2.857 1.188e-02 0.233 -2.837 FNDC3B fibronectin type III domain containing 3B 3 173240111, 173241037 BF444916 3q26.31 Hs.159430 9

endoplasmic reticulum

membrane

integral to membrane

 
225425_s_at 0.550 9.587 2.856 1.189e-02 0.233 -2.838 MRPL41 mitochondrial ribosomal protein L41 9 139566129 AV726260 9q34.3 Hs.44017 10

structural constituent of ribosome

mitochondrion

mitochondrial large ribosomal subunit

ribosome

translation

apoptosis

cell cycle

 
240110_at 0.636 4.433 2.856 1.190e-02 0.233 -2.838 HMGCS2 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 (mitochondrial) 1 -120092525 AI090874 1p13-p12 Hs.59889 13

hydroxymethylglutaryl-CoA synthase activity

hydroxymethylglutaryl-CoA synthase activity

mitochondrion

mitochondrial inner membrane

mitochondrial matrix

cholesterol biosynthetic process

response to nutrient

metabolic process

isoprenoid biosynthetic process

transferase activity

response to drug

response to peptide hormone stimulus

Synthesis and degradation of ketone bodies

Valine, leucine and isoleucine degradation

Butanoate metabolism

Terpenoid backbone biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

PPAR signaling pathway

231801_at 0.298 4.291 2.856 1.190e-02 0.233 -2.838 NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 20 -49441172, -49441171 AL035682 20q13.2-q13.3 Hs.713650 93

cytokine production

transcription factor activity

protein binding

nucleus

cytoplasm

cytosol

regulation of transcription, DNA-dependent

transcription activator activity

sequence-specific DNA binding

positive regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

MAPK signaling pathway

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

213145_at -0.387 5.728 -2.855 1.191e-02 0.233 -2.839 FBXL14 F-box and leucine-rich repeat protein 14 12 -1545420 BF001666 12p13.33 Hs.367956 3

modification-dependent protein catabolic process

 
204175_at -0.608 7.909 -2.855 1.192e-02 0.233 -2.840 ZNF593 zinc finger protein 593 1 26368974 NM_015871 1p36.11 Hs.477273 6

negative regulation of transcription from RNA polymerase II promoter

DNA binding

transcription corepressor activity

intracellular

nucleus

nucleolus

zinc ion binding

regulation of transcription

metal ion binding

 
218082_s_at -0.404 7.293 -2.854 1.193e-02 0.233 -2.841 UBP1 upstream binding protein 1 (LBP-1a) 3 -33404831, -33404831 NM_014517 3p22.3 Hs.643744 11

transcription factor activity

transcription corepressor activity

nucleus

regulation of transcription from RNA polymerase II promoter

negative regulation of transcription

specific transcriptional repressor activity

viral genome replication

 
203589_s_at -0.601 5.744 -2.854 1.194e-02 0.233 -2.842 TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) 3 -143154017 NM_006286 3q23 Hs.379018 14

transcription factor activity

transcription cofactor activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

cell cycle

protein domain specific binding

Cell cycle

203582_s_at -0.396 7.410 -2.854 1.195e-02 0.233 -2.842 RAB4A RAB4A, member RAS oncogene family 1 227473501 NM_004578 1q42-q43 Hs.296169 43

nucleotide binding

GTPase activity

GTP binding

cytoplasm

small GTPase mediated signal transduction

protein transport

membrane

Endocytosis

200978_at 0.369 12.281 2.853 1.196e-02 0.233 -2.843 MDH1 malate dehydrogenase 1, NAD (soluble) 2 63669625 NM_005917 2p13.3 Hs.526521 18

malic enzyme activity

binding

soluble fraction

cytoplasm

cytosol

cytosol

glycolysis

tricarboxylic acid cycle

oxaloacetate metabolic process

malate metabolic process

oxidoreductase activity

NAD metabolic process

L-malate dehydrogenase activity

L-malate dehydrogenase activity

cellular carbohydrate metabolic process

NAD or NADH binding

oxidation reduction

Citrate cycle (TCA cycle)

Pyruvate metabolism

Glyoxylate and dicarboxylate metabolism

Carbon fixation in photosynthetic organisms

Reductive carboxylate cycle (CO2 fixation)

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

202376_at 0.964 5.401 2.853 1.197e-02 0.233 -2.844 SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 14 94148466 NM_001085 14q32.1 Hs.534293 Hs.710488 134

DNA binding

serine-type endopeptidase inhibitor activity

protein binding

extracellular region

intracellular

nucleus

acute-phase response

inflammatory response

regulation of lipid metabolic process

peptidase inhibitor activity

 
1555575_a_at -0.261 9.171 -2.852 1.199e-02 0.233 -2.845 KDELR1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 19 -53577638 BC008958 19q13.3 Hs.515515 14

receptor activity

KDEL sequence binding

protein binding

membrane fraction

endoplasmic reticulum

ER-Golgi intermediate compartment

protein retention in ER lumen

intracellular protein transport

membrane

integral to membrane

vesicle-mediated transport

Vibrio cholerae infection

215040_at 0.426 6.661 2.852 1.199e-02 0.233 -2.845 RNASEH2B ribonuclease H2, subunit B 13 50381892, 50381892 AL049218 13q14.3 Hs.306291 13

nucleus

DNA replication

205657_at 0.287 6.751 2.852 1.199e-02 0.233 -2.846 HAAO 3-hydroxyanthranilate 3,4-dioxygenase 2 -42847732 NM_012205 2p21 Hs.368805 12

3-hydroxyanthranilate 3,4-dioxygenase activity

3-hydroxyanthranilate 3,4-dioxygenase activity

soluble fraction

cytoplasm

cytosol

cytosol

ferrous iron binding

electron carrier activity

response to zinc ion

oxidoreductase activity

pyridine nucleotide biosynthetic process

NAD metabolic process

quinolinate biosynthetic process

response to cadmium ion

metal ion binding

oxidation reduction

neuron maintenance

Tryptophan metabolism

Metabolic pathways

207685_at 0.316 5.628 2.852 1.199e-02 0.233 -2.846 CRYBB3 crystallin, beta B3 22 23925824 NM_004076 22q11.2-q12.1 22q11.23 Hs.533022 12

structural constituent of eye lens

protein binding

visual perception

 
202717_s_at -0.672 6.828 -2.851 1.200e-02 0.233 -2.846 CDC16 cell division cycle 16 homolog (S. cerevisiae) 13 114018463 NM_003903 13q34 Hs.374127 32

binding

nucleoplasm

cytoplasm

centrosome

cytosol

spindle microtubule

cell cycle

regulation of mitosis

cell proliferation

modification-dependent protein catabolic process

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

cell division

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

200610_s_at -0.358 9.937 -2.851 1.200e-02 0.233 -2.846 NCL nucleolin 2 -232027702 NM_005381 2q12-qter Hs.79110 97

nucleotide binding

angiogenesis

DNA binding

RNA binding

nucleus

nucleolus

cell cortex

protein C-terminus binding

ribonucleoprotein complex

telomeric DNA binding

Pathogenic Escherichia coli infection - EHEC

227340_s_at 0.926 5.307 2.851 1.201e-02 0.234 -2.847 RGMB RGM domain family, member B 5 98132898 AL117590 5q15 Hs.526902 5

ER-Golgi intermediate compartment

plasma membrane

cell adhesion

signal transduction

BMP signaling pathway

identical protein binding

positive regulation of transcription

anchored to plasma membrane

 
230068_s_at 0.303 3.912 2.850 1.204e-02 0.234 -2.849 PEG3 paternally expressed 3 19 -62013256, -62013256 W93046 19q13.4 Hs.719209 18

nucleic acid binding

transcription factor activity

intracellular

nucleus

cytoplasm

regulation of transcription, DNA-dependent

apoptosis

zinc ion binding

metal ion binding

 
206319_s_at 0.229 3.208 2.850 1.204e-02 0.234 -2.849 SPINLW1 serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin) 20 -43602678, -43602678 AF286368 20q12-q13.2 Hs.121084 10

serine-type endopeptidase inhibitor activity

extracellular region

peptidase inhibitor activity

 
236073_at 0.292 5.254 2.850 1.204e-02 0.234 -2.849 EPHA10 EPH receptor A10 1 -37998531, -37954232 AA789266 1p34.3 Hs.129435 5

nucleotide binding

receptor activity

ephrin receptor activity

ATP binding

extracellular region

plasma membrane

protein amino acid phosphorylation

transmembrane receptor protein tyrosine kinase signaling pathway

integral to membrane

transferase activity

 
205161_s_at 0.612 5.494 2.850 1.204e-02 0.234 -2.849 PEX11A peroxisomal biogenesis factor 11 alpha 15 -88027290 NM_003847 15q26.1 Hs.31034 9

peroxisome

peroxisomal membrane

integral to peroxisomal membrane

signal transduction

membrane

integral to membrane

peroxisome fission

 
209748_at -0.482 6.626 -2.849 1.205e-02 0.234 -2.850 SPAST spastin 2 32142183 AB029006 2p24-p21 Hs.468091 90

nucleotide binding

microtubule bundle formation

ATP binding

ATP binding

nucleus

nucleus

cytoplasm

endosome

endoplasmic reticulum

centrosome

spindle

microtubule

ER to Golgi vesicle-mediated transport

cell cycle

cytokinesis, completion of separation

multicellular organismal development

nervous system development

microtubule binding

microtubule binding

cell death

microtubule-severing ATPase activity

membrane

integral to membrane

hydrolase activity

nucleoside-triphosphatase activity

cell differentiation

midbody

protein hexamerization

ATPase activity, uncoupled

alpha-tubulin binding

perinuclear region of cytoplasm

beta-tubulin binding

microtubule severing

protein homooligomerization

cell division

 
201807_at -0.346 8.724 -2.848 1.207e-02 0.234 -2.852 VPS26A vacuolar protein sorting 26 homolog A (S. pombe) 10 70553913 NM_004896 10q21.1 Hs.499925 17

protein binding

cytoplasm

endosome

cytosol

vacuolar transport

protein transporter activity

protein transport

membrane

retromer complex

retrograde transport, endosome to Golgi

 
228891_at -0.644 8.904 -2.848 1.209e-02 0.234 -2.853 SEMA4D sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D 9 -91181971, -91165525 N93399 9q22.2 Hs.494406 29

receptor activity

receptor binding

anti-apoptosis

immune response

cell adhesion

multicellular organismal development

nervous system development

membrane

integral to membrane

cell differentiation

positive regulation of axonogenesis

Axon guidance

225293_at 0.627 7.295 2.847 1.210e-02 0.234 -2.853 COL27A1 collagen, type XXVII, alpha 1 9 115958051 AK021957 9q32 Hs.494892 8

extracellular matrix structural constituent

extracellular region

collagen

cell adhesion

 
1553096_s_at 0.354 5.273 2.847 1.211e-02 0.234 -2.854 BCL2L11 BCL2-like 11 (apoptosis facilitator) 2 111594961, 111594961 NM_138627 2q13 Hs.469658 143

peripheral to membrane of membrane fraction

in utero embryonic development

B cell homeostasis

B cell apoptosis

kidney development

myeloid cell homeostasis

protein binding

cytoplasm

mitochondrion

mitochondrial outer membrane

cytosol

plasma membrane

induction of apoptosis

cell-matrix adhesion

spermatogenesis

microtubule binding

male gonad development

activation of pro-apoptotic gene products

post-embryonic development

mammary gland development

tube lumen formation

odontogenesis of dentine-containing tooth

T cell homeostasis

ear development

regulation of organ growth

regulation of pigmentation during development

spleen development

thymus development

post-embryonic organ morphogenesis

 
202636_at -0.484 7.437 -2.846 1.212e-02 0.235 -2.855 RNF103 ring finger protein 103 2 -86684026 NM_005667 2p11.2 Hs.469199 9

protein binding

central nervous system development

zinc ion binding

membrane

integral to membrane

metal ion binding

 
221912_s_at 0.644 8.726 2.846 1.213e-02 0.235 -2.855 CCDC28B coiled-coil domain containing 28B 1 32438788 AL049795 1p35.1 Hs.718470 10    
203633_at 0.653 7.024 2.846 1.213e-02 0.235 -2.856 CPT1A carnitine palmitoyltransferase 1A (liver) 11 -68278926, -68278663 BF001714 11q13.1-q13.2 Hs.503043 32

carnitine O-palmitoyltransferase activity

mitochondrion

mitochondrial outer membrane

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

transport

acyltransferase activity

membrane

integral to membrane

transferase activity

Fatty acid metabolism

PPAR signaling pathway

Adipocytokine signaling pathway

207622_s_at -0.472 6.421 -2.845 1.215e-02 0.235 -2.857 ABCF2 ATP-binding cassette, sub-family F (GCN20), member 2 7 -150540508, -150535855 NM_005692 7q36 Hs.654958 15

nucleotide binding

transporter activity

ATP binding

mitochondrial envelope

transport

ATPase activity

ATP-binding cassette (ABC) transporter complex

 
225369_at 0.302 5.837 2.845 1.216e-02 0.235 -2.858 ESAM endothelial cell adhesion molecule 11 -124128228 AL573851 11q24.2 Hs.173840 11

protein binding

plasma membrane

adherens junction

tight junction

homophilic cell adhesion

integral to membrane

cell junction

Cell adhesion molecules (CAMs)

Leukocyte transendothelial migration

203511_s_at 0.400 7.452 2.845 1.216e-02 0.235 -2.858 TRAPPC3 trafficking protein particle complex 3 1 -36374759 AF041432 1p34.3 Hs.523131 16

Golgi membrane

protein binding

endoplasmic reticulum

Golgi apparatus

cytosol

ER to Golgi vesicle-mediated transport

vesicle-mediated transport

TRAPP complex

 
213005_s_at -0.349 8.042 -2.845 1.217e-02 0.235 -2.858 KANK1 KN motif and ankyrin repeat domains 1 9 494702, 696895 D79994 9p24.3 Hs.306764 14

cytoplasm

 
224735_at -0.394 6.439 -2.844 1.217e-02 0.235 -2.859 CYBASC3 cytochrome b, ascorbate dependent 3 11 -60872797, -60872797 AA683481 11q12.2 Hs.22546 8

iron ion binding

lysosome

endosome

transport

membrane

integral to membrane

oxidoreductase activity

electron transport chain

metal ion binding

 
201854_s_at -0.552 7.057 -2.844 1.219e-02 0.235 -2.860 ATMIN ATM interactor 16 79626958 AI744148 16q23.2 Hs.16349 Hs.589959 9

intracellular

nucleus

response to DNA damage stimulus

zinc ion binding

metal ion binding

 
201957_at -0.494 8.875 -2.844 1.219e-02 0.235 -2.860 PPP1R12B protein phosphatase 1, regulatory (inhibitor) subunit 12B 1 200584458, 200698493 AF324888 1q32.1 Hs.444403 14

cytoplasm

regulation of muscle contraction

signal transduction

enzyme activator activity

Vascular smooth muscle contraction

242584_at 0.775 5.343 2.844 1.219e-02 0.235 -2.860 FAM161A family with sequence similarity 161, member A 2 -61905486 AI954412 2p15 Hs.440466 7    
241601_at -0.518 5.930 -2.844 1.219e-02 0.235 -2.860 WIPF3 WAS/WASL interacting protein family, member 3 7 29840865 H58488 7p14.3 Hs.709280 5

actin binding

cytoplasm

multicellular organismal development

spermatogenesis

cell differentiation

 
202804_at -0.576 7.373 -2.843 1.220e-02 0.235 -2.861 ABCC1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 16 15950934 AI539710 16p13.1 Hs.709181 163

nucleotide binding

transporter activity

ATP binding

membrane fraction

plasma membrane

integral to plasma membrane

transport

hydrolase activity

ATPase activity

response to drug

ATPase activity, coupled to transmembrane movement of substances

ABC transporters

1554868_s_at -0.901 7.913 -2.843 1.220e-02 0.235 -2.861 PCNP PEST proteolytic signal containing nuclear protein 3 102775731 BC013916 3q12.3 Hs.545311 Hs.654949 6

protein binding

nucleus

cell cycle

protein ubiquitination

proteasomal ubiquitin-dependent protein catabolic process

 
217595_at -0.319 2.713 -2.843 1.220e-02 0.235 -2.861 GSPT1 G1 to S phase transition 1 16 -11869485, -11869485 AV701723 16p13.1 Hs.528780 27

G1/S transition of mitotic cell cycle

nucleotide binding

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

translation release factor activity

GTPase activity

protein binding

GTP binding

intracellular

translation

protein amino acid methylation

 
227796_at -0.413 6.329 -2.843 1.220e-02 0.235 -2.861 ZFP62 zinc finger protein 62 homolog (mouse) 5 -180207218, -12668 AW157773 5q35.3 Hs.509227 Hs.719290 6

nucleic acid binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
42361_g_at 0.492 4.416 2.843 1.221e-02 0.235 -2.861 CCHCR1 coiled-coil alpha-helical rod protein 1 6 -31218194, -31218194, -2561482, -2561482, -2359996, -2359996 AI588986 6p21.3 Hs.485075 23

protein binding

nucleus

cytoplasm

protein export from nucleus

multicellular organismal development

cell differentiation

 
205569_at 0.704 4.122 2.842 1.222e-02 0.235 -2.862 LAMP3 lysosomal-associated membrane protein 3 3 -184322696 NM_014398 3q26.3-q27 Hs.518448 13

lysosomal membrane

cell proliferation

membrane

integral to membrane

Lysosome

212926_at -0.589 4.594 -2.842 1.222e-02 0.235 -2.863 SMC5 structural maintenance of chromosomes 5 9 72063697 AW183677 9q21.12 Hs.534189 Hs.601181 13

nucleotide binding

ATP binding

nucleus

chromosome

DNA repair

DNA recombination

response to DNA damage stimulus

 
211947_s_at -0.378 4.975 -2.842 1.223e-02 0.235 -2.863 BAT2D1 BAT2 domain containing 1 1 169721289 AI359472 1q23.3 Hs.494614 5    
1556560_a_at 0.273 5.406 2.842 1.224e-02 0.235 -2.864 LOC100128071 similar to hCG41624 1   BI825578 1p35.1 Hs.660539 1    
204113_at -0.646 4.814 -2.842 1.224e-02 0.235 -2.864 CUGBP1 CUG triplet repeat, RNA binding protein 1 11 -47446520, -47446520, -47446520 NM_006560 11p11 Hs.632137 34

nucleotide binding

translation repressor activity, nucleic acid binding

mRNA binding

nucleus

cytoplasm

mRNA splice site selection

mRNA processing

germ cell development

embryonic development

RNA interference

ribonucleoprotein complex

BRE binding

 
210875_s_at -0.892 6.856 -2.842 1.224e-02 0.235 -2.864 ZEB1 zinc finger E-box binding homeobox 1 10 31647429, 31647717, 31647752, 31648106, 31650069 U12170 10p11.2 Hs.124503 52

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

transcription coactivator activity

transcription corepressor activity

intracellular

nucleus

immune response

zinc ion binding

cell proliferation

sequence-specific DNA binding

metal ion binding

 
204286_s_at -0.917 3.439 -2.841 1.225e-02 0.235 -2.865 PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 18 55718171 NM_021127 18q21.32 Hs.96 36

release of cytochrome c from mitochondria

protein binding

mitochondrion

induction of apoptosis

activation of caspase activity

cell structure disassembly during apoptosis

virus-infected cell apoptosis

response to dsRNA

p53 signaling pathway

209682_at -0.469 6.375 -2.841 1.225e-02 0.235 -2.865 CBLB Cas-Br-M (murine) ecotropic retroviral transforming sequence b 3 -106859798 U26710 3q13.11 Hs.430589 44

signal transducer activity

calcium ion binding

protein binding

nucleus

cytoplasm

NLS-bearing substrate import into nucleus

immune response

cell surface receptor linked signal transduction

zinc ion binding

ligase activity

modification-dependent protein catabolic process

ErbB signaling pathway

Ubiquitin mediated proteolysis

Endocytosis

Jak-STAT signaling pathway

T cell receptor signaling pathway

Insulin signaling pathway

Pathways in cancer

Chronic myeloid leukemia

229068_at -0.533 5.555 -2.841 1.226e-02 0.235 -2.865 CCT5 chaperonin containing TCP1, subunit 5 (epsilon) 5 10303281 BF197357 5p15.2 Hs.1600 30

nucleotide binding

ATP binding

nucleus

nucleolus

cytoplasm

chaperonin-containing T-complex

protein folding

unfolded protein binding

 
227144_at -0.575 5.835 -2.841 1.226e-02 0.235 -2.865 C22orf9 chromosome 22 open reading frame 9 22 -43966786, -43966786 AA476916 22q13.31 Hs.592207 10

protein binding

 
224738_x_at -0.388 8.355 -2.841 1.226e-02 0.235 -2.865 RPL7L1 ribosomal protein L7-like 1 6 42955648 BE858199 6p21.1 Hs.520133 5

structural constituent of ribosome

protein binding

intracellular

ribosome

translation

large ribosomal subunit

transcription regulator activity

 
235463_s_at -0.769 4.215 -2.840 1.228e-02 0.235 -2.867 LASS6 LAG1 homolog, ceramide synthase 6 2 169021080 AI081356 2q24.3 Hs.506829 Hs.718403 5

transcription factor activity

nucleus

endoplasmic reticulum

regulation of transcription, DNA-dependent

lipid biosynthetic process

membrane

integral to membrane

sphingolipid biosynthetic process

sequence-specific DNA binding

ceramide biosynthetic process

sphingosine N-acyltransferase activity

 
203880_at -0.355 10.231 -2.840 1.229e-02 0.235 -2.868 COX17 COX17 cytochrome c oxidase assembly homolog (S. cerevisiae) 3 -120871061 NM_005694 3q13.33 Hs.534383 19

cytoplasm

mitochondrion

mitochondrial intermembrane space

generation of precursor metabolites and energy

copper ion transport

copper chaperone activity

metal ion binding

Oxidative phosphorylation

Metabolic pathways

216942_s_at -0.444 5.244 -2.839 1.230e-02 0.235 -2.869 CD58 CD58 molecule 1 -116862845, -116858679 D28586 1p13 Hs.34341 38

protein binding

plasma membrane

integral to plasma membrane

cell-cell adhesion

anchored to membrane

Cell adhesion molecules (CAMs)

1553106_at -0.600 2.812 -2.839 1.232e-02 0.235 -2.870 C5orf24 chromosome 5 open reading frame 24 5 134209268, 134209556 NM_152409 5q31.1 Hs.406549 3    
221649_s_at -0.268 6.484 -2.838 1.233e-02 0.236 -2.871 PPAN peter pan homolog (Drosophila) 19 10077964 BC000535 19p13 Hs.14468 15

protein binding

nucleus

nucleolus

RNA splicing

 
200798_x_at -0.785 6.800 -2.837 1.236e-02 0.236 -2.873 MCL1 myeloid cell leukemia sequence 1 (BCL2-related) 1 -148813658 NM_021960 1q21 Hs.719112 154

cell fate determination

protein binding

nucleus

nucleoplasm

cytoplasm

mitochondrion

mitochondrial outer membrane

anti-apoptosis

multicellular organismal development

protein channel activity

membrane

integral to membrane

cellular homeostasis

cell differentiation

response to cytokine stimulus

regulation of apoptosis

protein heterodimerization activity

 
204711_at 0.305 5.867 2.837 1.237e-02 0.236 -2.873 KIAA0753 KIAA0753 17 -6422368 NM_014804 17p13.2-p13.1 Hs.28070 3    
201534_s_at -0.532 7.049 -2.836 1.237e-02 0.236 -2.874 UBL3 ubiquitin-like 3 13 -29236545 AF044221 13q12-q13 Hs.145575 12

intracellular

plasma membrane

 
202879_s_at 0.299 5.344 2.836 1.238e-02 0.236 -2.874 CYTH1 cytohesin 1 17 -74181724 AI798823 17q25 Hs.191215 28

ARF guanyl-nucleotide exchange factor activity

protein binding

intracellular

cytoplasm

plasma membrane

vesicle-mediated transport

regulation of cell adhesion

regulation of ARF protein signal transduction

 
229139_at -0.822 10.879 -2.836 1.238e-02 0.236 -2.874 JPH1 junctophilin 1 8 -75309492 AI202201 8q21 Hs.657367 9

molecular_function

microsome

plasma membrane

muscle organ development

structural constituent of muscle

junctional sarcoplasmic reticulum membrane

integral to membrane

sarcoplasmic reticulum

Z disc

junctional membrane complex

regulation of ryanodine-sensitive calcium-release channel activity

calcium ion transport into cytosol

 
208945_s_at -0.502 8.493 -2.836 1.238e-02 0.236 -2.874 BECN1 beclin 1, autophagy related 17 -38215675 NM_003766 17q21 Hs.716464 56

protein binding

cytoplasm

Golgi apparatus

trans-Golgi network

autophagy

anti-apoptosis

cellular defense response

negative regulation of cell proliferation

response to virus

membrane

cytoplasmic membrane-bounded vesicle

positive regulation of macroautophagy

protein complex

Regulation of autophagy

222851_at -0.510 4.566 -2.836 1.238e-02 0.236 -2.874 ZNF654 zinc finger protein 654 3 88270951 AL120354 3p11.1 Hs.591650 Hs.661116 1

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
225564_at 0.471 5.002 2.836 1.239e-02 0.236 -2.875 SPATA13 spermatogenesis associated 13 13 23632886 AW269397 13q12.12 Hs.657121 7

Rho guanyl-nucleotide exchange factor activity

intracellular

regulation of Rho protein signal transduction

 
222507_s_at -0.802 7.252 -2.835 1.240e-02 0.236 -2.876 TMEM9B TMEM9 domain family, member B 11 -8925415 AI188389 11p15.3 Hs.501853 7

signal transducer activity

membrane

integral to membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

 
229241_at 0.366 6.996 2.835 1.241e-02 0.236 -2.876 LDHD lactate dehydrogenase D 16 -73703258 AI623801 16q23.1 Hs.380929 5

D-lactate dehydrogenase (cytochrome) activity

protein binding

protein binding

mitochondrion

oxidoreductase activity

FAD binding

oxidation reduction

Pyruvate metabolism

221753_at -0.387 5.727 -2.835 1.241e-02 0.236 -2.876 SSH1 slingshot homolog 1 (Drosophila) 12 -107709824, -107709824, -107700595 AI651213 12q24.11 Hs.199763 23

cell morphogenesis

actin binding

protein tyrosine phosphatase activity

protein binding

cytoplasm

cytoskeleton

plasma membrane

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

lamellipodium

actin cytoskeleton organization

Regulation of actin cytoskeleton

1557450_s_at 0.326 7.313 2.834 1.243e-02 0.236 -2.878 WHAMML2 WAS protein homolog associated with actin, golgi membranes and microtubules-like 2 (pseudogene) 15 26781769 AF129926 15q13.1 Hs.558967 Hs.655308 3    
226612_at -0.792 8.605 -2.834 1.243e-02 0.236 -2.878 FLJ25076 probable ubiquitin-conjugating enzyme E2 FLJ25076 5 6501735 H17038 5p15.31 Hs.126856 3

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

 
215120_s_at -0.627 4.795 -2.834 1.244e-02 0.236 -2.879 SAMD4A sterile alpha motif domain containing 4A 14 54104386, 54291255 BF697247 14q22.2 Hs.98259 4

cytoplasm

synaptosome

translation repressor activity

dendrite

positive regulation of translation

 
217555_at -0.366 5.076 -2.834 1.244e-02 0.236 -2.879 SMC1A structural maintenance of chromosomes 1A X -53417794 AI042030 Xp11.22-p11.21 Hs.211602 47

cell cycle checkpoint

nucleotide binding

nuclear mRNA splicing, via spliceosome

condensed chromosome kinetochore

condensed nuclear chromosome

chromatin binding

microtubule motor activity

protein binding

ATP binding

nucleus

chromosome

cytoplasm

DNA repair

response to DNA damage stimulus

cell cycle

mitotic spindle organization

mitotic sister chromatid cohesion

meiosis

cohesin core heterodimer

response to radiation

DNA damage response, signal transduction

protein heterodimerization activity

chromosome organization

cell division

Cell cycle

210965_x_at 0.333 3.294 2.833 1.245e-02 0.236 -2.879 CDC2L5 cell division cycle 2-like 5 (cholinesterase-related cell division controller) 7 39956483 BC001274 7p13 Hs.233552 18

nucleotide binding

cyclin-dependent protein kinase activity

ATP binding

protein amino acid phosphorylation

regulation of mitosis

multicellular organismal development

positive regulation of cell proliferation

transferase activity

 
1564224_x_at 0.363 4.679 2.833 1.245e-02 0.236 -2.879 UNQ2963 hypothetical LOC283314 12 7152179 AK091792 12p13.31 Hs.715709 2    
225547_at -0.604 10.993 -2.833 1.247e-02 0.236 -2.880 SNHG6 small nucleolar RNA host gene 6 (non-protein coding) 8 -67996718 BG169443 8q13 Hs.372680 1    
202242_at -0.595 9.102 -2.832 1.248e-02 0.236 -2.881 TSPAN7 tetraspanin 7 X 38305674 NM_004615 Xp11.4 Hs.441664 18

plasma membrane

integral to plasma membrane

protein amino acid N-linked glycosylation

 
235305_s_at 0.497 7.354 2.832 1.248e-02 0.236 -2.881 ECHDC2 enoyl Coenzyme A hydratase domain containing 2 1 -53134491 AI903313 1p32.3 Hs.476319 2

mitochondrion

lipid metabolic process

fatty acid metabolic process

metabolic process

lyase activity

 
1553363_at 0.335 4.519 2.832 1.248e-02 0.236 -2.882 C6orf195 chromosome 6 open reading frame 195 6 -2567970 NM_152554 6p25.2 Hs.680574 4    
203256_at 0.415 5.599 2.831 1.250e-02 0.237 -2.883 CDH3 cadherin 3, type 1, P-cadherin (placental) 16 67235651 NM_001793 16q22.1 Hs.191842 56

calcium ion binding

protein binding

plasma membrane

cell-cell adherens junction

homophilic cell adhesion

visual perception

integral to membrane

response to stimulus

Cell adhesion molecules (CAMs)

208205_at 0.330 4.128 2.831 1.252e-02 0.237 -2.884 PCDHA9 protocadherin alpha 9 5 140207540, 140207540 NM_014005 5q31 Hs.199343 11

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

 
202950_at -0.425 7.774 -2.831 1.252e-02 0.237 -2.884 CRYZ crystallin, zeta (quinone reductase) 1 -74943762, -74943759 NM_001889 1p31-p22 Hs.83114 14

NADPH:quinone reductase activity

binding

cytoplasm

visual perception

zinc ion binding

oxidoreductase activity

oxidation reduction

 
229229_at 0.469 4.802 2.830 1.252e-02 0.237 -2.884 AGXT2 alanine-glyoxylate aminotransferase 2 5 -35033962 AJ292204 5p13 Hs.34494 7

mitochondrion

alanine-glyoxylate transaminase activity

transferase activity

pyridoxal phosphate binding

(R)-3-amino-2-methylpropionate-pyruvate transaminase activity

Alanine, aspartate and glutamate metabolism

1560105_at 0.487 3.936 2.830 1.254e-02 0.237 -2.886 PTPRB protein tyrosine phosphatase, receptor type, B 12 -69196898, -69196898 BC043182 12q15-q21 Hs.434375 29

transmembrane receptor protein tyrosine phosphatase activity

protein binding

integral to plasma membrane

protein amino acid dephosphorylation

membrane

hydrolase activity

Adherens junction

210878_s_at -0.460 8.178 -2.830 1.255e-02 0.237 -2.886 KDM3B lysine (K)-specific demethylase 3B 5 137716183 BC001202 5q31 Hs.714832 14

iron ion binding

nucleus

nucleolus

zinc ion binding

oxidoreductase activity

chromatin modification

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

regulation of transcription

metal ion binding

oxidation reduction

 
222985_at -0.310 11.964 -2.829 1.255e-02 0.237 -2.887 YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 7 -75794043 AB024334 7q11.23 Hs.520974 56

protein kinase C binding

insulin-like growth factor receptor binding

cytoplasm

negative regulation of protein kinase activity

protein targeting

protein kinase C inhibitor activity

regulation of signal transduction

protein domain specific binding

regulation of neuron differentiation

regulation of synaptic plasticity

Cell cycle

Neurotrophin signaling pathway

1557044_at 0.316 2.374 2.829 1.256e-02 0.237 -2.887 LOC100127980 hypothetical protein LOC100127980 19   BC041949 19q13.12 Hs.595153 1    
202579_x_at -0.802 8.373 -2.829 1.256e-02 0.237 -2.887 HMGN4 high mobility group nucleosomal binding domain 4 6 26646550 NM_006353 6p21.3 Hs.236774 6

chromatin

DNA binding

nucleus

 
204931_at 0.473 3.536 2.829 1.257e-02 0.237 -2.888 TCF21 transcription factor 21 6 134251951, 134251952 NM_003206 6pter-qter Hs.78061 16

branching involved in ureteric bud morphogenesis

DNA binding

protein binding

nucleus

mesoderm development

sex differentiation

organ morphogenesis

transcription regulator activity

regulation of transcription

 
208352_x_at 0.471 11.108 2.828 1.258e-02 0.237 -2.889 ANK1 ankyrin 1, erythrocytic 8 -41629901, -41629901, -41629900 NM_020479 8p11.1 Hs.654438 Hs.667377 49

structural constituent of cytoskeleton

cytoplasm

plasma membrane

exocytosis

cytoskeleton organization

signal transduction

cytoskeletal adaptor activity

spectrin-associated cytoskeleton

basolateral plasma membrane

sarcoplasmic reticulum

enzyme binding

spectrin binding

M band

maintenance of epithelial cell apical/basal polarity

 
208875_s_at -0.641 6.061 -2.828 1.258e-02 0.237 -2.889 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 3 197951124 BF796470 3q29 Hs.518530 80

nucleotide binding

protein serine/threonine kinase activity

ATP binding

nucleus

cytoplasm

cytosol

negative regulation of protein kinase activity

apoptosis

signal transduction

membrane

transferase activity

regulation of growth

identical protein binding

interspecies interaction between organisms

protein amino acid autophosphorylation

perinuclear region of cytoplasm

MAPK signaling pathway

ErbB signaling pathway

Axon guidance

Focal adhesion

T cell receptor signaling pathway

Regulation of actin cytoskeleton

Renal cell carcinoma

212137_at -0.345 9.074 -2.828 1.259e-02 0.237 -2.889 LARP1 La ribonucleoprotein domain family, member 1 5 154072654, 154115081 AV746402 5q33.2 Hs.292078 11

RNA binding

protein binding

 
217187_at 0.468 6.696 2.828 1.259e-02 0.237 -2.889 MUC5AC mucin 5AC, oligomeric mucus/gel-forming 11 1132473 Z34282 11p15.5 Hs.534332 Hs.558950 95

molecular_function

protein binding

extracellular region

apoptosis

induction of apoptosis

cell adhesion

digestion

biological_process

negative regulation of cell proliferation

extracellular matrix constituent, lubricant activity

negative regulation of cell migration

fibril

fibril organization

 
225155_at -1.054 11.077 -2.827 1.260e-02 0.237 -2.890 SNHG5 small nucleolar RNA host gene 5 (non-protein coding) 6 -86443443 BG339050 6q14.3 Hs.292457 2    
1555379_at 0.315 4.048 2.826 1.263e-02 0.238 -2.892 FAM159A family with sequence similarity 159, member A 1 52871653 BC041608 1p32.3 Hs.424589 2

membrane

integral to membrane

 
208873_s_at -0.469 9.513 -2.826 1.265e-02 0.238 -2.893 REEP5 receptor accessory protein 5 5 -112239979 BC000232 5q22-q23 Hs.429608 11

molecular_function

protein binding

biological_process

membrane

integral to membrane

 
210401_at 0.722 6.348 2.825 1.266e-02 0.238 -2.894 P2RX1 purinergic receptor P2X, ligand-gated ion channel, 1 17 -3746633 U45448 17p13.3 Hs.41735 42

purinergic nucleotide receptor activity

serotonin secretion by platelet

regulation of vascular smooth muscle contraction

receptor activity

ATP-gated cation channel activity

calcium channel activity

protein binding

ATP binding

plasma membrane

plasma membrane

integral to plasma membrane

activation of caspase activity

signal transduction

insemination

regulation of blood pressure

death

synaptosome

platelet activation

external side of cell outer membrane

response to ATP

synaptic transmission, glutamatergic

vasoconstriction

protein homodimerization activity

positive regulation of ion transport

membrane raft

postsynaptic membrane

ceramide biosynthetic process

protein heterodimerization activity

response to stimulus

regulation of calcium ion transport

Calcium signaling pathway

Neuroactive ligand-receptor interaction

201383_s_at -0.802 6.963 -2.825 1.267e-02 0.238 -2.895 NBR1 neighbor of BRCA1 gene 1 17 38576023, 38576036, 38576771 AL044170 17q21.31 Hs.277721 Hs.373818 Hs.546264 Hs.708158 16

zinc ion binding

metal ion binding

 
223247_at -0.333 6.851 -2.824 1.268e-02 0.238 -2.895 MED10 mediator complex subunit 10 5 -6425038 BC003353 5p15.31 Hs.13885 12

nucleus

regulation of transcription from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

regulation of transcription

 
223124_s_at -0.460 8.444 -2.824 1.268e-02 0.238 -2.896 C1orf128 chromosome 1 open reading frame 128 1 23977462 AF271784 1p36.11 Hs.31819 4    
206355_at -1.324 5.808 -2.824 1.269e-02 0.238 -2.896 GNAL guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type 18 11679135, 11741561 R20102 18p11.22-p11.21 Hs.136295 16

nucleotide binding

GTPase activity

signal transducer activity

GTP binding

signal transduction

G-protein coupled receptor protein signaling pathway

guanyl nucleotide binding

Calcium signaling pathway

Olfactory transduction

205981_s_at -0.798 6.685 -2.824 1.269e-02 0.238 -2.897 ING2 inhibitor of growth family, member 2 4 184663213 NM_001564 4q35.1 Hs.107153 27

DNA binding

chromatin binding

protein binding

nucleus

regulation of transcription, DNA-dependent

signal transduction

zinc ion binding

transcription activator activity

chromatin modification

Sin3 complex

CCAAT-binding factor complex

regulation of growth

positive regulation of transcription

metal ion binding

 
200045_at -0.438 8.182 -2.824 1.270e-02 0.238 -2.897 ABCF1 ATP-binding cassette, sub-family F (GCN20), member 1 6 30647148, 1987727, 1786022 NM_001090 6p21.33 Hs.655285 15

nucleotide binding

ATP binding

translation

inflammatory response

translation factor activity, nucleic acid binding

ATPase activity

ATPase activity, coupled to transmembrane movement of substances

 
1567250_at 0.305 2.951 2.824 1.270e-02 0.238 -2.897 OR10A3 olfactory receptor, family 10, subfamily A, member 3 11 -7916698 X64986 11p15.4 Hs.381322 5

receptor activity

olfactory receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

sensory perception of smell

integral to membrane

response to stimulus

Olfactory transduction

229573_at -0.640 6.310 -2.823 1.270e-02 0.238 -2.897 USP9X ubiquitin specific peptidase 9, X-linked X 40829831 AI659456 Xp11.4 Hs.77578 24

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

protein binding

cytoplasm

ubiquitin-dependent protein catabolic process

transforming growth factor beta receptor signaling pathway

female gamete generation

peptidase activity

protein deubiquitination

BMP signaling pathway

co-SMAD binding

 
228301_x_at 0.466 10.761 2.823 1.271e-02 0.238 -2.898 NDUFB10 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa 16 1949517 AA854479 16p13.3 Hs.513266 11

protein binding

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

transport

NADH dehydrogenase (ubiquinone) activity

membrane

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

244572_at 0.831 7.073 2.822 1.274e-02 0.238 -2.900 KY kyphoscoliosis peptidase 3 -135801454 AI147310 3q22.2 Hs.146730 4

cytoplasm

cytoskeleton

peptidase activity

 
208696_at -0.424 8.894 -2.822 1.274e-02 0.238 -2.900 CCT5 chaperonin containing TCP1, subunit 5 (epsilon) 5 10303281 AF275798 5p15.2 Hs.1600 30

nucleotide binding

ATP binding

nucleus

nucleolus

cytoplasm

chaperonin-containing T-complex

protein folding

unfolded protein binding

 
203610_s_at -0.643 4.839 -2.822 1.275e-02 0.239 -2.901 TRIM38 tripartite motif-containing 38 6 26071049 AI363270 6p21.3 Hs.584851 7

signal transducer activity

protein binding

cellular_component

intracellular

zinc ion binding

positive regulation of I-kappaB kinase/NF-kappaB cascade

metal ion binding

 
218127_at -0.765 7.185 -2.821 1.276e-02 0.239 -2.901 NFYB nuclear transcription factor Y, beta 12 -103034987 AI804118 12q22-q23 Hs.84928 38

transcription factor activity

protein binding

intracellular

nucleus

CCAAT-binding factor complex

sequence-specific DNA binding

positive regulation of transcription, DNA-dependent

Antigen processing and presentation

210104_at -0.392 6.849 -2.820 1.279e-02 0.239 -2.903 MED6 mediator complex subunit 6 14 -70120709 AF074723 14q24.2 Hs.497353 22

RNA polymerase II transcription factor activity

transcription coactivator activity

nucleus

RNA polymerase II transcription mediator activity

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

 
1565661_x_at 0.388 5.480 2.820 1.280e-02 0.239 -2.904 FUT6 fucosyltransferase 6 (alpha (1,3) fucosyltransferase) 19 -5781636 BC040472 19p13.3 Hs.631846 Hs.705615 19

Golgi apparatus

protein amino acid glycosylation

membrane

integral to membrane

transferase activity, transferring glycosyl groups

3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase activity

L-fucose catabolic process

alpha(1,3)-fucosyltransferase activity

Glycosphingolipid biosynthesis - lacto and neolacto series

Metabolic pathways

221900_at -0.255 3.522 -2.819 1.282e-02 0.239 -2.905 COL8A2 collagen, type VIII, alpha 2 1 -36333432 AI806793 1p34.2 Hs.353001 19

extracellular matrix structural constituent

extracellular region

basement membrane

cell-cell adhesion

extracellular matrix organization

protein binding, bridging

 
209220_at 0.633 4.200 2.819 1.282e-02 0.239 -2.905 GPC3 glypican 3 X -132497441 L47125 Xq26.1 Hs.644108 53

extracellular region

proteinaceous extracellular matrix

extracellular space

plasma membrane

integral to plasma membrane

anatomical structure morphogenesis

anchored to membrane

heparan sulfate proteoglycan binding

 
200983_x_at -0.345 10.055 -2.819 1.282e-02 0.239 -2.906 CD59 CD59 molecule, complement regulatory protein 11 -33681131, -33681131, -33681131 BF983379 11p13 Hs.278573 Hs.709466 Hs.710641 107

protein binding

extracellular region

membrane fraction

plasma membrane

cell surface receptor linked signal transduction

blood coagulation

anchored to membrane

anchored to external side of plasma membrane

Complement and coagulation cascades

Hematopoietic cell lineage

205503_at -0.339 3.973 -2.819 1.282e-02 0.239 -2.906 PTPN14 protein tyrosine phosphatase, non-receptor type 14 1 -212597633 NM_005401 1q32.2 Hs.696573 13

protein tyrosine phosphatase activity

binding

cytoplasm

cytoskeleton

protein amino acid dephosphorylation

hydrolase activity

 
202302_s_at -0.653 9.282 -2.819 1.283e-02 0.239 -2.906 RSRC2 arginine/serine-rich coiled-coil 2 12 -121555225, -121555225 NM_023012 12q24.31 Hs.432996 4    
235272_at 0.355 4.572 2.818 1.283e-02 0.239 -2.907 SBSN suprabasin 19 -40706110 AI814274 19q13.13 Hs.433484 5

extracellular region

cytoplasm

 
200976_s_at -0.429 9.179 -2.818 1.284e-02 0.239 -2.907 TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 7 27746262 NM_006024 7p15 Hs.34576 21

intracellular

apoptosis

anti-apoptosis

zinc ion binding

identical protein binding

 
222599_s_at 0.326 5.691 2.817 1.287e-02 0.240 -2.909 NAV2 neuron navigator 2 11 19328846, 19691456, 20001211 AU137607 11p15.1 Hs.502116 Hs.551898 Hs.639427 Hs.639428 18

nucleotide binding

helicase activity

ATP binding

nucleus

nucleolus

cytoplasm

hydrolase activity

 
206168_at 0.226 4.861 2.816 1.289e-02 0.240 -2.910 ZC3H7B zinc finger CCCH-type containing 7B 22 40027512 NM_025013 22q13.2 Hs.592188 12

nucleic acid binding

protein binding

intracellular

nucleus

zinc ion binding

interspecies interaction between organisms

metal ion binding

 
244178_at 0.287 4.706 2.816 1.289e-02 0.240 -2.911 COMMD7 COMM domain containing 7 20 -30754153 AW451792 20q11.21 Hs.408427 6

protein binding

cellular_component

negative regulation of transcription

negative regulation of NF-kappaB transcription factor activity

tumor necrosis factor-mediated signaling pathway

NF-kappaB binding

 
224879_at 0.619 10.010 2.816 1.289e-02 0.240 -2.911 C9orf123 chromosome 9 open reading frame 123 9 -7786490 BF315994 9p24.1 Hs.7517 4

membrane

integral to membrane

 
91703_at -0.413 7.837 -2.816 1.290e-02 0.240 -2.911 EHBP1L1 EH domain binding protein 1-like 1 11 65100084 AA149545 11q13.1 Hs.502867 4    
211563_s_at -0.925 6.715 -2.815 1.291e-02 0.240 -2.912 C19orf2 chromosome 19 open reading frame 2 19 35125264 AB006572 19q12 Hs.466391 11

transcription corepressor activity

nucleus

DNA-directed RNA polymerase II, core complex

cytoplasm

regulation of transcription from RNA polymerase II promoter

protein folding

response to virus

prefoldin complex

unfolded protein binding

 
209155_s_at -0.541 9.084 -2.815 1.292e-02 0.240 -2.913 NT5C2 5'-nucleotidase, cytosolic II 10 -104835929 BC001595 10q24.32-q24.33 Hs.97439 12

nucleotide binding

magnesium ion binding

protein binding

cytoplasm

cytosol

5'-nucleotidase activity

5'-nucleotidase activity

nucleotide metabolic process

hydrolase activity

Purine metabolism

Pyrimidine metabolism

Nicotinate and nicotinamide metabolism

Biosynthesis of alkaloids derived from histidine and purine

Metabolic pathways

217854_s_at -0.456 8.703 -2.815 1.292e-02 0.240 -2.913 POLR2E polymerase (RNA) II (DNA directed) polypeptide E, 25kDa 19 -1037577 NM_002695 19p13.3 Hs.24301 91

nuclear mRNA splicing, via spliceosome

DNA binding

DNA-directed RNA polymerase activity

protein binding

nucleus

nucleoplasm

DNA-directed RNA polymerase II, core complex

transcription

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

interspecies interaction between organisms

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

Huntington's disease

204879_at -0.429 5.889 -2.815 1.292e-02 0.240 -2.913 PDPN podoplanin 1 13782838, 13784553 NM_006474 1p36.21 Hs.468675 48

cell morphogenesis

ruffle

lymphangiogenesis

plasma membrane

integral to plasma membrane

prostaglandin metabolic process

water transport

cell cycle

signal transduction

multicellular organismal development

cell proliferation

regulation of cell shape

folic acid transporter activity

amino acid transmembrane transporter activity

water channel activity

folic acid transport

cell-cell adhesion

lamellipodium

filopodium

positive regulation of cell migration

tube morphogenesis

lung alveolus development

 
203730_s_at -0.513 4.232 -2.814 1.296e-02 0.240 -2.915 ZKSCAN5 zinc finger with KRAB and SCAN domains 5 7 98940208, 98940508 BF196931 7q22 Hs.110839 9

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
232696_at 0.480 3.719 2.813 1.297e-02 0.241 -2.916 LOC648556 uncharacterized gastric protein ZA43P 16   AI394334   Hs.203594      
225001_at 0.303 6.224 2.813 1.298e-02 0.241 -2.917 RAB3D RAB3D, member RAS oncogene family 19 -11296092 AI744658 19p13.2 Hs.655274 13

nucleotide binding

GTPase activity

protein binding

GTP binding

plasma membrane

exocytosis

small GTPase mediated signal transduction

protein transport

 
209476_at -0.522 7.045 -2.812 1.299e-02 0.241 -2.918 TMX1 thioredoxin-related transmembrane protein 1 14 50776635 AL080080 14q22.1 Hs.125221 10

membrane fraction

nucleus

endoplasmic reticulum

endoplasmic reticulum membrane

DNA replication

transport

ER to Golgi vesicle-mediated transport

anti-apoptosis

response to stress

signal transduction

cell proliferation

disulfide oxidoreductase activity

membrane

integral to membrane

electron transport chain

arsenate reductase (thioredoxin) activity

leukocyte activation

cell redox homeostasis

positive regulation of transcription, DNA-dependent

positive regulation of growth

 
221641_s_at -0.499 7.343 -2.812 1.301e-02 0.241 -2.919 ACOT9 acyl-CoA thioesterase 9 X -23631697 AF241787 Xp22.11 Hs.298885 6

acetyl-CoA hydrolase activity

carboxylesterase activity

mitochondrion

acyl-CoA metabolic process

hydrolase activity

 
229985_at 0.715 7.367 2.812 1.301e-02 0.241 -2.919 BTNL9 butyrophilin-like 9 5 180399830 AI912653 5q35.3 Hs.546502 4

membrane

integral to membrane

 
221020_s_at -0.424 6.232 -2.812 1.301e-02 0.241 -2.919 SLC25A32 solute carrier family 25, member 32 8 -104480042 NM_030780 8q22.3 Hs.607819 6

transporter activity

binding

mitochondrion

mitochondrial inner membrane

transport

folic acid transporter activity

folic acid transport

membrane

integral to membrane

 
1552732_at -1.263 10.048 -2.812 1.301e-02 0.241 -2.919 ABRA actin-binding Rho activating protein 8 -107840886 AL832152 8q23.1 Hs.374668 12

protein import into nucleus, translocation

transcription coactivator activity

actin binding

cytoplasm

plasma membrane

protein transport

actin cytoskeleton

sarcomere

positive regulation of Rho protein signal transduction

positive regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

positive regulation of transcription factor activity

intracellular protein transmembrane transport

 
225885_at -0.618 8.605 -2.811 1.302e-02 0.241 -2.920 EEA1 early endosome antigen 1 12 -91690415 AI336848 12q22 Hs.567367 32

calmodulin binding

phosphatidylinositol binding

intracellular

membrane fraction

cytoplasm

early endosome

cytosol

serine-pyruvate aminotransferase complex

vesicle fusion

zinc ion binding

membrane

synaptic vesicle to endosome fusion

extrinsic to plasma membrane

GTP-dependent protein binding

protein homodimerization activity

early endosome to late endosome transport

metal ion binding

Endocytosis

221311_x_at -0.398 7.824 -2.811 1.302e-02 0.241 -2.920 LYRM2 LYR motif containing 2 6 -90398663 NM_020466 6q14.2-q16.1 Hs.177275 5    
226651_at -0.859 7.921 -2.811 1.303e-02 0.241 -2.920 HOMER1 homer homolog 1 (Drosophila) 5 -78705541 AW052119 5q14.2 Hs.591761 33

skeletal muscle contraction

protein binding

membrane fraction

cytoplasm

plasma membrane

integral to plasma membrane

activation of phospholipase C activity by metabotropic glutamate receptor signaling pathway

synaptic transmission

postsynaptic density

Z disc

cell junction

positive regulation of calcium ion transport via store-operated calcium channel activity

costamere

synapse

postsynaptic membrane

skeletal muscle fiber development

 
200775_s_at -0.333 10.099 -2.811 1.303e-02 0.241 -2.921 HNRNPK heterogeneous nuclear ribonucleoprotein K 9 -85772817, -85772817 BC000355 9q21.32-q21.33 Hs.522257 89

nuclear mRNA splicing, via spliceosome

DNA binding

RNA binding

protein binding

nucleus

nucleoplasm

spliceosomal complex

nucleolus

cytoplasm

signal transduction

RNA splicing

heterogeneous nuclear ribonucleoprotein complex

interspecies interaction between organisms

 
243109_at 0.290 3.106 2.811 1.304e-02 0.241 -2.921 MCTP2 multiple C2 domains, transmembrane 2 15 92642433, 92700167 AA748418 15q26.2 Hs.33368 Hs.592017 7

calcium ion binding

calcium-dependent phospholipid binding

membrane fraction

membrane

integral to membrane

calcium-mediated signaling

 
1552626_a_at 0.458 4.315 2.810 1.304e-02 0.241 -2.921 TMEM163 transmembrane protein 163 2 -134929800 NM_030923 2q21.3 Hs.369471 Hs.595089 5

membrane

integral to membrane

 
217735_s_at -0.434 4.990 -2.810 1.304e-02 0.241 -2.921 EIF2AK1 eukaryotic translation initiation factor 2-alpha kinase 1 7 -6028405 AW007368 7p22 Hs.719136 19

nucleotide binding

eukaryotic translation initiation factor 2alpha kinase activity

ATP binding

cytoplasm

response to stress

negative regulation of cell proliferation

response to external stimulus

transferase activity

negative regulation of translation

heme binding

protein homodimerization activity

negative regulation of translational initiation by iron

protein amino acid autophosphorylation

negative regulation of hemoglobin biosynthetic process

 
232722_at 0.265 3.025 2.810 1.304e-02 0.241 -2.921 RNASET2 ribonuclease T2 6 -167262993 AK001769 6q27 Hs.529989 11

RNA binding

endonuclease activity

ribonuclease activity

extracellular region

RNA catabolic process

hydrolase activity

ribonuclease T2 activity

 
224819_at 0.443 6.667 2.810 1.305e-02 0.241 -2.921 TCEAL8 transcription elongation factor A (SII)-like 8 X -102394578 AI743979 Xq22.1 Hs.389734 4

nucleus

regulation of transcription

 
214273_x_at 0.287 6.788 2.810 1.306e-02 0.241 -2.922 C16orf35 chromosome 16 open reading frame 35 16 -75803, -75803 AV704353 16p13.3 Hs.19699 6

molecular_function

cellular_component

biological_process

 
1560097_at 0.345 4.776 2.810 1.306e-02 0.241 -2.923 FHAD1 forkhead-associated (FHA) phosphopeptide binding domain 1 1 15446354 AB067524 1p36.21 Hs.659997 6    
213313_at -0.541 8.556 -2.808 1.310e-02 0.241 -2.925 RABGAP1 RAB GTPase activating protein 1 9 124743108 AI922519 9q33.2-q33.3 Hs.271341 6

GTPase activator activity

Rab GTPase activator activity

intracellular

cytoplasm

centrosome

cytosol

microtubule associated complex

cell cycle

tubulin binding

regulation of Rab GTPase activity

 
222442_s_at -0.469 7.601 -2.808 1.310e-02 0.241 -2.925 ARL8B ADP-ribosylation factor-like 8B 3 5138929 AW055237 3p26.1 Hs.250009 Hs.719100 10

nucleotide binding

GTPase activity

GTP binding

intracellular

cytoplasm

lysosomal membrane

endosome

chromosome segregation

small GTPase mediated signal transduction

membrane

GDP binding

midbody

late endosome membrane

alpha-tubulin binding

beta-tubulin binding

spindle midzone

 
208860_s_at -0.533 7.456 -2.808 1.311e-02 0.241 -2.926 ATRX alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) X -76647011 U09820 Xq13.1-q21.1 Hs.533526 Hs.645562 Hs.653797 66

nucleotide binding

DNA binding

DNA helicase activity

protein binding

ATP binding

nucleus

nuclear heterochromatin

DNA repair

DNA methylation

DNA recombination

regulation of transcription, DNA-dependent

response to DNA damage stimulus

zinc ion binding

hydrolase activity

metal ion binding

 
224744_at -0.818 5.412 -2.808 1.312e-02 0.241 -2.926 IMPAD1 inositol monophosphatase domain containing 1 8 -58033041 AW628838 8q12.1 Hs.716471 4

magnesium ion binding

inositol-1(or 4)-monophosphatase activity

membrane

integral to membrane

hydrolase activity

 
219256_s_at 0.424 4.260 2.808 1.312e-02 0.241 -2.926 SH3TC1 SH3 domain and tetratricopeptide repeats 1 4 8251959 NM_018986 4p16.1 Hs.479116 5

binding

cellular_component

biological_process

 
242422_at -0.551 4.508 -2.808 1.312e-02 0.241 -2.927 G3BP1 GTPase activating protein (SH3 domain) binding protein 1 5 151131668 AA180161 5q33.1 Hs.587054 27

nucleotide binding

DNA binding

RNA binding

ATP-dependent DNA helicase activity

ATP-dependent RNA helicase activity

helicase activity

endonuclease activity

protein binding

ATP binding

intracellular

nucleus

cytoplasm

cytosol

plasma membrane

transport

Ras protein signal transduction

hydrolase activity

 
230977_at 0.262 6.985 2.807 1.312e-02 0.241 -2.927 NPM2 nucleophosmin/nucleoplasmin 2 8 21938299 AI016313 8p21.3 Hs.131055 5

cytoplasmic chromatin

nuclear chromatin

nucleic acid binding

nucleus

chromatin remodeling

regulation of exit from mitosis

single fertilization

embryonic development

oocyte differentiation

histone binding

positive regulation of meiosis

 
236302_at 2.416 3.500 2.807 1.313e-02 0.241 -2.927 PPM1E protein phosphatase 1E (PP2C domain containing) 17 54188230 R40892 17q22 Hs.245044 5

magnesium ion binding

protein serine/threonine phosphatase activity

nucleus

nucleolus

cytoplasm

protein amino acid dephosphorylation

protein serine/threonine phosphatase complex

hydrolase activity

manganese ion binding

 
212870_at -0.748 9.163 -2.807 1.314e-02 0.241 -2.928 SOS2 son of sevenless homolog 2 (Drosophila) 14 -49653595 AI628605 14q21 Hs.291533 20

DNA binding

Rho guanyl-nucleotide exchange factor activity

protein binding

cellular_component

intracellular

regulation of Rho protein signal transduction

regulation of small GTPase mediated signal transduction

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

Dorso-ventral axis formation

Focal adhesion

Gap junction

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Insulin signaling pathway

GnRH signaling pathway

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Endometrial cancer

Glioma

Prostate cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Non-small cell lung cancer

209480_at 1.290 4.013 2.807 1.314e-02 0.241 -2.928 HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 6 -32735634 M16276 6p21.3 Hs.409934 Hs.534322 Hs.713773 998

antigen processing and presentation of peptide or polysaccharide antigen via MHC class II

plasma membrane

immune response

immune response

membrane

membrane

integral to membrane

MHC class II receptor activity

MHC class II protein complex

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

210249_s_at -0.326 7.532 -2.805 1.318e-02 0.242 -2.931 NCOA1 nuclear receptor coactivator 1 2 24660849 U59302 2p23 Hs.596314 123

DNA binding

chromatin binding

transcription coactivator activity

histone acetyltransferase activity

signal transducer activity

nucleus

signal transduction

acyltransferase activity

transferase activity

androgen receptor signaling pathway

transcription regulator activity

nuclear hormone receptor binding

positive regulation of transcription from RNA polymerase II promoter

protein N-terminus binding

androgen receptor binding

 
225659_at -0.507 5.094 -2.804 1.321e-02 0.242 -2.933 SPOPL speckle-type POZ protein-like 2 138975819 BF516590 2q22.1 Hs.333297 6

protein binding

nucleus

modification-dependent protein catabolic process

 
224392_s_at 0.438 4.446 2.804 1.321e-02 0.242 -2.933 OPN3 opsin 3 1 -239823074 AF303588 1q43 Hs.409081 Hs.719236 10

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

visual perception

phototransduction

G-protein coupled photoreceptor activity

membrane

protein-chromophore linkage

regulation of circadian rhythm

response to stimulus

 
236294_at -0.314 5.729 -2.804 1.322e-02 0.242 -2.934 HUWE1 HECT, UBA and WWE domain containing 1 X -53575796 R37670 Xp11.22 Hs.136905 28

protein polyubiquitination

DNA binding

ubiquitin-protein ligase activity

protein binding

intracellular

nucleus

nucleolus

cytoplasm

protein modification process

histone ubiquitination

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

cell differentiation

Ubiquitin mediated proteolysis

239004_at 0.240 5.936 2.803 1.323e-02 0.242 -2.934 SQSTM1 sequestosome 1 5 179165993, 179166608, 179180447 AI041019 5q35 Hs.437277 100

protein kinase C binding

protein binding

nucleus

cytoplasm

late endosome

cytosol

cytosol

ubiquitin-dependent protein catabolic process

apoptosis

response to stress

immune response

intracellular signaling cascade

protein localization

zinc ion binding

endosome transport

cell differentiation

receptor tyrosine kinase binding

SH2 domain binding

SH2 domain binding

regulation of I-kappaB kinase/NF-kappaB cascade

regulation of I-kappaB kinase/NF-kappaB cascade

ubiquitin binding

ubiquitin binding

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

 
1570627_at 0.328 4.230 2.803 1.323e-02 0.242 -2.934 TCEB3 transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A) 1 23942442 BC019949 1p36.1 Hs.15535 26

DNA binding

protein binding

nucleus

nucleoplasm

cytoplasm

regulation of transcription from RNA polymerase II promoter

integral to membrane

transcription regulator activity

regulation of transcription

 
202518_at -0.415 7.330 -2.803 1.323e-02 0.242 -2.934 BCL7B B-cell CLL/lymphoma 7B 7 -72588621 NM_001707 7q11.23 Hs.647051 8

actin binding

cellular_component

biological_process

 
217827_s_at -0.762 8.679 -2.803 1.324e-02 0.242 -2.935 SPG21 spastic paraplegia 21 (autosomal recessive, Mast syndrome) 15 -63042415, -63042415 NM_016630 15q21-q22 Hs.242458 10

cytoplasm

endosome

Golgi apparatus

cytosol

cytosol

cell death

membrane

trans-Golgi network transport vesicle

trans-Golgi network transport vesicle

CD4 receptor binding

CD4 receptor binding

antigen receptor-mediated signaling pathway

 
218659_at -0.436 6.876 -2.803 1.325e-02 0.242 -2.935 ASXL2 additional sex combs like 2 (Drosophila) 2 -25815756 NM_018263 2p24.1 Hs.594386 6

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
206052_s_at -0.525 6.785 -2.803 1.325e-02 0.242 -2.935 SLBP stem-loop binding protein 4 -1664324 NM_006527 4p16.3 Hs.298345 27

mRNA binding

nucleus

nucleoplasm

cytoplasm

mRNA processing

histone mRNA 3'-end processing

ribonucleoprotein complex

 
212231_at -0.444 7.872 -2.802 1.326e-02 0.242 -2.936 FBXO21 F-box protein 21 12 -116065967 AB020682 12q24.22 Hs.719089 7

ubiquitin ligase complex

ubiquitin-protein ligase activity

ubiquitin-dependent protein catabolic process

 
212441_at -0.438 9.842 -2.802 1.327e-02 0.242 -2.937 KIAA0232 KIAA0232 4 6835359 D86985 4p16.1 Hs.79276 7

nucleotide binding

ATP binding

 
215418_at 0.358 5.060 2.802 1.327e-02 0.242 -2.937 PARVA parvin, alpha 11 12355721 AK022316 11p15.3 Hs.607144 17

actin binding

protein binding

nucleus

cytoplasm

cytoskeleton

plasma membrane

focal adhesion

cell adhesion

lamellipodium

cell junction

Focal adhesion

225240_s_at -0.546 7.880 -2.802 1.327e-02 0.242 -2.937 MSI2 musashi homolog 2 (Drosophila) 17 52688929, 52689372 BE220026 17q22 Hs.658922 7

nucleotide binding

RNA binding

cytoplasm

 
200719_at -0.555 8.289 -2.802 1.328e-02 0.242 -2.937 SKP1 S-phase kinase-associated protein 1 5 -133519980 BE964043 5q31 Hs.171626 Hs.710433 63

protein binding

nucleoplasm

cytosol

ubiquitin-dependent protein catabolic process

SCF ubiquitin ligase complex

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

Wnt signaling pathway

TGF-beta signaling pathway

1569792_a_at -0.328 5.239 -2.801 1.328e-02 0.242 -2.938 C12orf72 chromosome 12 open reading frame 72 12 31691360, 31703387, 31703875 BC039107 12p11.21 Hs.585084 2    
224068_x_at -0.503 6.791 -2.801 1.328e-02 0.242 -2.938 RBM22 RNA binding motif protein 22 5 -150050544 U39402 5q33.1 Hs.713564 17

protein import into nucleus, translocation

nucleotide binding

RNA binding

nucleus

spliceosomal complex

nucleolus

cytoplasm

mRNA processing

zinc ion binding

RNA splicing

metal ion binding

calcium-dependent protein binding

 
205687_at -0.482 7.337 -2.801 1.329e-02 0.242 -2.938 UBFD1 ubiquitin family domain containing 1 16 23476362 NM_019116 16p12 Hs.3459 3    
216898_s_at -0.877 4.865 -2.801 1.329e-02 0.242 -2.938 COL4A3 collagen, type IV, alpha 3 (Goodpasture antigen) 2 227737524 U02520 2q36-q37 Hs.570065 77

integrin binding

integrin binding

extracellular matrix structural constituent

protein binding

extracellular region

collagen

collagen type IV

induction of apoptosis

activation of caspase activity

cell adhesion

cell surface receptor linked signal transduction

sensory perception of sound

blood circulation

metalloendopeptidase inhibitor activity

negative regulation of cell proliferation

negative regulation of angiogenesis

 
229730_at -0.747 9.352 -2.801 1.330e-02 0.242 -2.939 SMTNL2 smoothelin-like 2 17 4434024, 4434582 AI193973 17p13.2 Hs.441709 2    
203661_s_at -0.453 8.860 -2.799 1.334e-02 0.243 -2.941 TMOD1 tropomodulin 1 9 99326257 BC002660 9q22.3 Hs.494595 18

actin binding

tropomyosin binding

nucleus

cytoplasm

membrane

myofibril

myofibril assembly

cortical cytoskeleton

 
225519_at -0.489 7.838 -2.799 1.334e-02 0.243 -2.942 PPP4R2 protein phosphatase 4, regulatory subunit 2 3 73128808 AA206408 3p13 Hs.431092 7

protein binding

centrosome

mRNA processing

protein modification process

RNA splicing

 
223460_at 0.300 6.687 2.799 1.336e-02 0.243 -2.943 CAMKK1 calcium/calmodulin-dependent protein kinase kinase 1, alpha 17 -3715199, -3710365, -3710365 AL136576 17p13.2 Hs.8417 16

nucleotide binding

calmodulin-dependent protein kinase activity

calmodulin binding

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

transferase activity

Adipocytokine signaling pathway

220459_at 0.457 3.644 2.798 1.336e-02 0.243 -2.943 MCM3APAS MCM3AP antisense RNA (non-protein coding) 21 46473585 NM_018118 21q22.3 Hs.709346 3    
236523_at -0.731 10.116 -2.798 1.337e-02 0.243 -2.944 LOC285556 hypothetical protein LOC285556 4   BF435831 4q23 Hs.480371      
217596_at -0.295 5.341 -2.798 1.338e-02 0.243 -2.944 UPF3A UPF3 regulator of nonsense transcripts homolog A (yeast) 13 114065179 AA649851 13q34 Hs.533855 20

nucleotide binding

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

RNA binding

nucleocytoplasmic transporter activity

protein binding

nucleus

cytoplasm

transport

mRNA transport

 
202223_at -0.403 6.452 -2.798 1.338e-02 0.243 -2.944 STT3A STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae) 11 124967948 NM_002219 11q23.3 Hs.504237 9

dolichyl-diphosphooligosaccharide-protein glycotransferase activity

membrane fraction

endoplasmic reticulum

protein amino acid glycosylation

oligosaccharyltransferase complex

membrane

integral to membrane

transferase activity

protein amino acid N-linked glycosylation via asparagine

 
227945_at -0.887 7.217 -2.798 1.338e-02 0.243 -2.945 TBC1D1 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 4 37569114 BE882538 4p14 Hs.176503 15

GTPase activator activity

Rab GTPase activator activity

intracellular

nucleus

regulation of Rab GTPase activity

 
212990_at -0.500 5.635 -2.797 1.340e-02 0.243 -2.946 SYNJ1 synaptojanin 1 21 -32922939, -32922939 AB020717 21q22.2 Hs.473632 31

RNA binding

inositol or phosphatidylinositol phosphatase activity

phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity

inositol-polyphosphate 5-phosphatase activity

cytoplasm

dephosphorylation

hydrolase activity

synaptic vesicle endocytosis

Inositol phosphate metabolism

Metabolic pathways

Phosphatidylinositol signaling system

235301_at 0.523 5.912 2.797 1.340e-02 0.243 -2.946 KIAA1324L KIAA1324-like 7 -86347173, -86347173 AI797353 7q21.12 Hs.208093 3

G-protein coupled receptor activity

protein binding

G-protein coupled receptor protein signaling pathway

membrane

integral to membrane

 
201830_s_at -0.708 6.960 -2.796 1.342e-02 0.243 -2.947 NET1 neuroepithelial cell transforming 1 10 5444517, 5478545 NM_005863 10p15 Hs.25155 19

regulation of cell growth

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

cellular_component

intracellular

nucleus

cytoplasm

intracellular signaling cascade

regulation of Rho protein signal transduction

 
1556665_at 0.251 4.054 2.796 1.342e-02 0.243 -2.947 TTC6 tetratricopeptide repeat domain 6 14   BU680030 14q21.1 Hs.670915 2

binding

 
209342_s_at -0.805 6.352 -2.796 1.343e-02 0.243 -2.948 IKBKB inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta 8 42247985 AF080158 8p11.2 Hs.597664 172

nucleotide binding

B cell homeostasis

ATP binding

cytoplasm

cytosol

protein amino acid phosphorylation

IkappaB kinase activity

transcription activator activity

transferase activity

identical protein binding

positive regulation of NF-kappaB transcription factor activity

MAPK signaling pathway

Chemokine signaling pathway

Apoptosis

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

T cell receptor signaling pathway

B cell receptor signaling pathway

Neurotrophin signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

Type II diabetes mellitus

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Pancreatic cancer

Prostate cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Small cell lung cancer

225429_at -0.775 8.456 -2.796 1.344e-02 0.243 -2.948 PPP6C protein phosphatase 6, catalytic subunit 9 -126948672 BF437011 9q33.3 Hs.715605 16

G1/S transition of mitotic cell cycle

protein serine/threonine phosphatase activity

iron ion binding

protein binding

cytoplasm

cytosol

protein amino acid dephosphorylation

cell cycle

hydrolase activity

manganese ion binding

metal ion binding

 
207079_s_at -0.599 7.534 -2.796 1.344e-02 0.243 -2.948 MED6 mediator complex subunit 6 14 -70120709 NM_005466 14q24.2 Hs.497353 22

RNA polymerase II transcription factor activity

transcription coactivator activity

nucleus

RNA polymerase II transcription mediator activity

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

 
1561518_at 0.288 5.110 2.795 1.344e-02 0.243 -2.949 LOC283914 hypothetical protein LOC283914 16 34455287, 34455402 BC038774 16p11.2-p11.1 Hs.385772 1    
203313_s_at -0.563 4.866 -2.795 1.345e-02 0.243 -2.949 TGIF1 TGFB-induced factor homeobox 1 18 3402071, 3437607, 3439972, 3440030, 3440171, 3441590, 3443771 NM_003244 18p11.3 Hs.373550 38

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

transcription corepressor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

sequence-specific DNA binding

 
201123_s_at -0.915 9.932 -2.795 1.345e-02 0.243 -2.949 EIF5A eukaryotic translation initiation factor 5A 17 7151041, 7151579, 7152011, 7152417 NM_001970 17p13-p12 Hs.534314 52

RNA binding

translation initiation factor activity

translation elongation factor activity

nucleus

annulate lamellae

nuclear pore

cytoplasm

endoplasmic reticulum

cytosol

mRNA export from nucleus

translation

translational frameshifting

protein export from nucleus

nucleocytoplasmic transport

nucleocytoplasmic transport

induction of apoptosis

cell proliferation

peptidyl-lysine modification to hypusine

peptidyl-lysine modification to hypusine

protein transport

membrane

U6 snRNA binding

viral genome replication

ribosome binding

positive regulation of translational elongation

positive regulation of translational termination

positive regulation of translational initiation

protein N-terminus binding

intracellular protein transmembrane transport

 
223018_at -0.271 6.731 -2.795 1.345e-02 0.243 -2.949 NOB1 NIN1/RPN12 binding protein 1 homolog (S. cerevisiae) 16 -68333274 BC000050 16q22.3 Hs.271695 Hs.606475 8

protein binding

nucleus

zinc ion binding

metal ion binding

 
222430_s_at -0.440 7.568 -2.795 1.346e-02 0.243 -2.950 YTHDF2 YTH domain family, member 2 1 28935722 BC002559 1p35 Hs.532286 5

humoral immune response

 
217770_at -0.460 7.001 -2.795 1.347e-02 0.243 -2.950 PIGT phosphatidylinositol glycan anchor biosynthesis, class T 20 43478137 NM_015937 20q12-q13.12 Hs.437388 19

GPI-anchor transamidase activity

protein binding

endoplasmic reticulum

membrane

integral to membrane

attachment of GPI anchor to protein

attachment of GPI anchor to protein

GPI-anchor transamidase complex

Glycosylphosphatidylinositol(GPI)-anchor biosynthesis

Metabolic pathways

230821_at -0.429 5.839 -2.794 1.348e-02 0.243 -2.951 ZNF148 zinc finger protein 148 3 -126427202 AW594167 3q21 Hs.592591 34

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

specific RNA polymerase II transcription factor activity

intracellular

nucleus

DNA-directed RNA polymerase II, core complex

nucleolus

Golgi apparatus

cellular defense response

gamete generation

zinc ion binding

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

 
204260_at -2.349 4.431 -2.794 1.349e-02 0.243 -2.952 CHGB chromogranin B (secretogranin 1) 20 5839973 NM_001819 20pter-p12 Hs.516874 35

hormone activity

protein binding

extracellular region

 
217489_s_at 0.236 2.368 2.793 1.352e-02 0.244 -2.954 IL6R interleukin 6 receptor 1 152644292 S72848 1q21 Hs.709210 132

hepatic immune response

monocyte chemotaxis

positive regulation of leukocyte chemotaxis

receptor activity

ciliary neurotrophic factor receptor activity

interleukin-6 receptor activity

receptor binding

extracellular region

plasma membrane

interleukin-6 receptor complex

acute-phase response

integral to membrane

apical plasma membrane

enzyme binding

endocrine pancreas development

endocrine pancreas development

positive regulation of chemokine production

positive regulation of interleukin-6 production

response to cytokine stimulus

positive regulation of tyrosine phosphorylation of Stat3 protein

protein homodimerization activity

regulation of apoptosis

positive regulation of osteoblast differentiation

positive regulation of anti-apoptosis

positive regulation of smooth muscle cell proliferation

positive regulation of peptidyl-tyrosine phosphorylation

defense response to Gram-negative bacterium

interleukin-6-mediated signaling pathway

ciliary neurotrophic factor binding

ciliary neurotrophic factor-mediated signaling pathway

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

Hematopoietic cell lineage

236050_at 0.307 5.484 2.792 1.354e-02 0.244 -2.955 C11orf35 chromosome 11 open reading frame 35 11 -544856 AI656897 11p15.5 Hs.669395 2    
212224_at -1.323 7.934 -2.791 1.357e-02 0.244 -2.957 ALDH1A1 aldehyde dehydrogenase 1 family, member A1 9 -74705406 NM_000689 9q21.13 Hs.76392 51

retinal dehydrogenase activity

aldehyde dehydrogenase (NAD) activity

aldehyde dehydrogenase (NAD) activity

Ras GTPase activator activity

androgen binding

cytoplasm

cytosol

cellular aldehyde metabolic process

oxidoreductase activity

oxidation reduction

Retinol metabolism

Metabolic pathways

225264_at -0.338 7.534 -2.791 1.357e-02 0.244 -2.957 RARS2 arginyl-tRNA synthetase 2, mitochondrial 6 -88280815 AK023550 6q16.1 Hs.485910 8

nucleotide binding

arginine-tRNA ligase activity

protein binding

ATP binding

cytoplasm

mitochondrion

mitochondrial matrix

arginyl-tRNA aminoacylation

ligase activity

Aminoacyl-tRNA biosynthesis

224444_s_at 0.590 5.346 2.791 1.357e-02 0.244 -2.957 C1orf97 chromosome 1 open reading frame 97 1 209622719 BC005997 1q32.3 Hs.523932 4    
230893_at -0.877 6.116 -2.791 1.358e-02 0.244 -2.958 DNAJC21 DnaJ (Hsp40) homolog, subfamily C, member 21 5 34965454 AI223870 5p13.2 Hs.131887 5

nucleic acid binding

intracellular

zinc ion binding

heat shock protein binding

metal ion binding

 
200738_s_at -0.635 11.446 -2.791 1.358e-02 0.244 -2.958 PGK1 phosphoglycerate kinase 1 X 77246321 NM_000291 Xq13 Hs.78771 52

nucleotide binding

phosphoglycerate kinase activity

ATP binding

cytoplasm

glycolysis

phosphorylation

transferase activity

Glycolysis / Gluconeogenesis

Carbon fixation in photosynthetic organisms

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

219918_s_at -0.366 3.070 -2.790 1.358e-02 0.244 -2.958 ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 1 -195319879 NM_018123 1q31 Hs.121028 35

calmodulin binding

nucleus

cytoplasm

cell cycle

mitosis

cell division

 
228794_at -0.923 12.513 -2.790 1.360e-02 0.244 -2.959 XIRP2 xin actin-binding repeat containing 2 2 167468220 AA211780 2q24.3 Hs.73680 8

actin binding

actin cytoskeleton organization

cell junction

 
205758_at 0.379 4.613 2.790 1.360e-02 0.244 -2.959 CD8A CD8a molecule 2 -86865239, -86865239 AW006735 2p12 Hs.85258 72

protein binding

extracellular region

plasma membrane

integral to plasma membrane

immune response

transmembrane receptor protein tyrosine kinase signaling pathway

coreceptor activity

antigen processing and presentation

T cell receptor complex

T cell activation

MHC class I protein binding

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Hematopoietic cell lineage

T cell receptor signaling pathway

Primary immunodeficiency

205008_s_at 0.773 6.424 2.790 1.360e-02 0.244 -2.959 CIB2 calcium and integrin binding family member 2 15 -76184045 NM_006383 15q24 Hs.129867 6

calcium ion binding

protein binding

 
225164_s_at -0.348 5.534 -2.790 1.360e-02 0.244 -2.959 EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 15 38013638 AB037759 15q15.1 Hs.656673 10

nucleotide binding

eukaryotic translation initiation factor 2alpha kinase activity

aminoacyl-tRNA ligase activity

protein binding

ATP binding

intracellular

cytoplasm

tRNA aminoacylation for protein translation

regulation of translational initiation

protein amino acid phosphorylation

transferase activity

cytosolic ribosome

 
233977_at 0.423 5.994 2.790 1.360e-02 0.244 -2.959 KIAA1772 KIAA1772 18 17076200 AB051559 18q11.1-q11.2 Hs.149020 4

membrane

integral to membrane

 
236726_at 0.334 3.702 2.790 1.361e-02 0.244 -2.959 RGS6 regulator of G-protein signaling 6 14 71469538 H41121 14q24.3 Hs.509872 13

signal transducer activity

GTPase activator activity

cellular_component

cytoplasm

heterotrimeric G-protein complex

intracellular signaling cascade

regulation of G-protein coupled receptor protein signaling pathway

negative regulation of signal transduction

membrane

 
1553515_at 0.314 4.582 2.789 1.362e-02 0.244 -2.960 MYEOV2 myeloma overexpressed 2 2 -240718914, -240714652 NM_138336 2q37.3 Hs.293884 2    
234684_s_at 0.289 2.616 2.789 1.362e-02 0.244 -2.960 KRTAP4-4 keratin associated protein 4-4 17 -36569431 AJ296168 17q12-q21 Hs.307022 2

keratin filament

 
203813_s_at 0.436 4.187 2.789 1.363e-02 0.244 -2.961 SLIT3 slit homolog 3 (Drosophila) 5 -168025648 NM_003062 5q35 Hs.604116 17

structural molecule activity

calcium ion binding

protein binding

extracellular region

extracellular space

multicellular organismal development

axon guidance

central nervous system development

organ morphogenesis

cell differentiation

Axon guidance

218300_at 0.319 7.164 2.789 1.363e-02 0.244 -2.961 C16orf53 chromosome 16 open reading frame 53 16 29735028 NM_024516 16p11.2 Hs.702841 7    
224621_at -0.344 8.366 -2.788 1.366e-02 0.245 -2.963 MAPK1 mitogen-activated protein kinase 1 22 -20453318, -20443946 AA129773 22q11.2 22q11.21 Hs.431850 822

MAPKKK cascade

nucleotide binding

phosphotyrosine binding

protein serine/threonine kinase activity

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

nucleoplasm

nucleolus

cytoplasm

cytosol

cytosol

cytoskeleton

protein amino acid phosphorylation

induction of apoptosis

chemotaxis

response to DNA damage stimulus

cell cycle

Ras protein signal transduction

synaptic transmission

organ morphogenesis

transferase activity

MAP kinase 2 activity

cytosine metabolic process

lipopolysaccharide-mediated signaling pathway

response to lipopolysaccharide

response to exogenous dsRNA

interspecies interaction between organisms

negative regulation of cell differentiation

T cell receptor signaling pathway

B cell receptor signaling pathway

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

mTOR signaling pathway

Vascular smooth muscle contraction

Dorso-ventral axis formation

TGF-beta signaling pathway

Axon guidance

VEGF signaling pathway

Focal adhesion

Adherens junction

Gap junction

Toll-like receptor signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Long-term potentiation

Neurotrophin signaling pathway

Long-term depression

Regulation of actin cytoskeleton

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Type II diabetes mellitus

Alzheimer's disease

Prion diseases

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Thyroid cancer

Melanoma

Bladder cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Non-small cell lung cancer

225851_at -0.365 7.347 -2.788 1.366e-02 0.245 -2.963 FNTB farnesyltransferase, CAAX box, beta 14 64523259 BF131248 14q23-q24 Hs.632345 26

farnesyltranstransferase activity

protein farnesyltransferase activity

protein binding

zinc ion binding

negative regulation of cell proliferation

transferase activity

protein amino acid farnesylation

wound healing

metal ion binding

positive regulation of fibroblast proliferation

 
218145_at 1.465 5.963 2.787 1.366e-02 0.245 -2.963 TRIB3 tribbles homolog 3 (Drosophila) 20 309307 NM_021158 20p13-p12.2 Hs.516826 36

transcription corepressor activity

protein kinase activity

protein kinase inhibitor activity

protein binding

protein binding

ATP binding

nucleus

nucleolus

protein amino acid phosphorylation

negative regulation of protein kinase activity

apoptosis

response to stress

protein kinase binding

protein kinase binding

regulation of MAP kinase activity

regulation of transcription

 
215121_x_at 0.747 5.938 2.787 1.367e-02 0.245 -2.963 IGL@ immunoglobulin lambda locus 22   AA680302 22q11.1-q11.2 Hs.449585 Hs.561078 20    
41858_at 0.346 6.059 2.787 1.368e-02 0.245 -2.964 PGAP2 post-GPI attachment to proteins 2 11 3775529, 3775624, 3775707, 3775765, 3785815, 3786341 AL049261 11p15.5 Hs.133968 5

Golgi membrane

endoplasmic reticulum

endoplasmic reticulum membrane

Golgi apparatus

GPI anchor biosynthetic process

protein transporter activity

membrane

integral to membrane

 
206633_at -2.206 7.373 -2.787 1.369e-02 0.245 -2.965 CHRNA1 cholinergic receptor, nicotinic, alpha 1 (muscle) 2 -175320568 NM_000079 2q24-q32 Hs.434479 43

skeletal muscle contraction

nicotinic acetylcholine-activated cation-selective channel activity

ion channel activity

extracellular ligand-gated ion channel activity

plasma membrane

nicotinic acetylcholine-gated receptor-channel complex

ion transport

signal transduction

neuromuscular synaptic transmission

neuromuscular junction development

cell surface

acetylcholine receptor activity

integral to membrane

regulation of action potential in neuron

cell junction

neuromuscular junction

regulation of membrane potential

postsynaptic membrane

muscle maintenance

skeletal muscle tissue growth

neuromuscular process

neuron maintenance

 
1553148_a_at -0.698 5.267 -2.786 1.369e-02 0.245 -2.965 SNX13 sorting nexin 13 7 -17796910 R75838 7p21.1 Hs.487648 10

signal transducer activity

protein binding

cell communication

negative regulation of signal transduction

protein transport

phosphoinositide binding

 
209199_s_at -0.512 11.643 -2.786 1.370e-02 0.245 -2.965 MEF2C myocyte enhancer factor 2C 5 -88049814, -88049814 N22468 5q14 Hs.653394 56

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription, DNA-dependent

apoptosis

multicellular organismal development

nervous system development

muscle organ development

negative regulation of specific transcription from RNA polymerase II promoter

nuclear speck

cell differentiation

sequence-specific DNA binding

positive regulation of survival gene product expression

MAPK signaling pathway

214736_s_at -0.412 7.879 -2.786 1.370e-02 0.245 -2.965 ADD1 adducin 1 (alpha) 4 2815381 BE898639 4p16.3 Hs.183706 Hs.701490 139

calmodulin binding

nucleus

cytoplasm

cytosol

cytoskeleton

plasma membrane

transcription factor binding

F-actin capping protein complex

actin cytoskeleton organization

spectrin binding

positive regulation of protein binding

protein homodimerization activity

metal ion binding

protein heterodimerization activity

actin filament binding

barbed-end actin filament capping

actin filament bundle formation

 
231251_at 0.416 3.737 2.786 1.370e-02 0.245 -2.966 WIPF2 WAS/WASL interacting protein family, member 2 17 35629099 AW295547 17q21.1-q21.2 Hs.421622 Hs.705989 11

actin binding

cytoplasm

cytoskeleton

 
215111_s_at -0.394 10.524 -2.786 1.371e-02 0.245 -2.966 TSC22D1 TSC22 domain family, member 1 13 -43905658, -43905654 AK027071 13q14 Hs.507916 23

transcription factor activity

protein binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

 
208070_s_at -0.381 7.680 -2.785 1.372e-02 0.245 -2.967 REV3L REV3-like, catalytic subunit of DNA polymerase zeta (yeast) 6 -111726926 NM_002912 6q21 Hs.232021 19

nucleotide binding

DNA binding

DNA-directed DNA polymerase activity

nucleus

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

DNA-dependent DNA replication

DNA repair

response to DNA damage stimulus

zinc ion binding

transferase activity

nucleotidyltransferase activity

metal ion binding

Metabolic pathways

225056_at 0.801 6.453 2.785 1.372e-02 0.245 -2.967 SIPA1L2 signal-induced proliferation-associated 1 like 2 1 -230600334 AB037810 1q42.2 Hs.715656 8

GTPase activator activity

protein binding

intracellular

regulation of small GTPase mediated signal transduction

 
229578_at -0.560 9.090 -2.785 1.374e-02 0.245 -2.969 JPH2 junctophilin 2 20 -42238870, -42173750 AA716165 20q13.12 Hs.441737 11

protein binding

membrane fraction

microsome

plasma membrane

junctional sarcoplasmic reticulum membrane

integral to membrane

sarcoplasmic reticulum

Z disc

regulation of ryanodine-sensitive calcium-release channel activity

calcium ion transport into cytosol

 
214955_at 0.349 6.566 2.784 1.376e-02 0.245 -2.969 TMPRSS6 transmembrane protease, serine 6 22 -35791424 AI912086 22q12.3 Hs.370885 16

angiogenesis

serine-type endopeptidase activity

plasma membrane

proteolysis

intracellular signaling cascade

peptidase activity

integral to membrane

extracellular matrix organization

fibrinolysis

 
201796_s_at 0.251 6.795 2.783 1.378e-02 0.245 -2.971 VARS valyl-tRNA synthetase 6 -31853275, -3191374, -3006978 BE790854 6p21.3 Hs.520026 15

nucleotide binding

valine-tRNA ligase activity

protein binding

ATP binding

intracellular

cytoplasm

mitochondrion

cytosol

translational elongation

valyl-tRNA aminoacylation

defense response

response to unfolded protein

response to nutrient

ligase activity

protein complex

NF-kappaB binding

Valine, leucine and isoleucine biosynthesis

Aminoacyl-tRNA biosynthesis

230852_at -0.554 8.114 -2.783 1.378e-02 0.245 -2.971 STAC3 SH3 and cysteine rich domain 3 12 -55923508 AW663959 12q13.3 Hs.417595 4

intracellular signaling cascade

zinc ion binding

diacylglycerol binding

identical protein binding

metal ion binding

 
229623_at 0.349 6.597 2.782 1.380e-02 0.246 -2.972 FLJ12993 hypothetical LOC441027 4 -83624627 BF508344 4q21.22 Hs.507676 1    
212206_s_at -0.651 7.769 -2.782 1.381e-02 0.246 -2.973 H2AFV H2A histone family, member V 7 -44839737, -44833012 BF343852 7p13 Hs.488189 12

nucleosome

DNA binding

nucleus

chromosome

nucleosome assembly

Systemic lupus erythematosus

233208_x_at -0.547 4.887 -2.782 1.383e-02 0.246 -2.974 CPSF2 cleavage and polyadenylation specific factor 2, 100kDa 14 91658081 AA583986 14q31.1 Hs.657632 24

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

hydrolase activity

 
206121_at -1.015 10.853 -2.781 1.383e-02 0.246 -2.974 AMPD1 adenosine monophosphate deaminase 1 (isoform M) 1 -115017244 NM_000036 1p13 Hs.89570 59

AMP deaminase activity

purine base metabolic process

nucleotide metabolic process

purine ribonucleoside monophosphate biosynthetic process

hydrolase activity

Purine metabolism

Biosynthesis of plant hormones

Metabolic pathways

222859_s_at 0.558 4.120 2.781 1.384e-02 0.246 -2.975 DAPP1 dual adaptor of phosphotyrosine and 3-phosphoinositides 4 100957003 AA150186 4q25-q27 Hs.436271 Hs.708484 15

protein tyrosine phosphatase activity

protein binding

phospholipid binding

cellular_component

cytoplasm

protein amino acid dephosphorylation

signal transduction

membrane

B cell receptor signaling pathway

232591_s_at -0.374 3.859 -2.781 1.385e-02 0.246 -2.975 TMEM30A transmembrane protein 30A 6 -76019357 AK022883 6q14.1 Hs.108530 7

membrane

integral to membrane

 
222642_s_at -0.522 5.374 -2.781 1.386e-02 0.246 -2.976 TMEM33 transmembrane protein 33 4 41631893 BC000948 4p13 Hs.31082 5

protein binding

biological_process

membrane

integral to membrane

melanosome

 
35150_at 0.299 7.161 2.780 1.386e-02 0.246 -2.976 CD40 CD40 molecule, TNF receptor superfamily member 5 20 44180312 X60592 20q12-q13.2 Hs.472860 290

receptor activity

extracellular region

plasma membrane

plasma membrane

integral to plasma membrane

protein complex assembly

inflammatory response

enzyme binding

platelet activation

B cell proliferation

positive regulation of I-kappaB kinase/NF-kappaB cascade

Cytokine-cytokine receptor interaction

Cell adhesion molecules (CAMs)

Toll-like receptor signaling pathway

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Primary immunodeficiency

202213_s_at -0.568 5.706 -2.780 1.386e-02 0.246 -2.976 CUL4B cullin 4B X -119542473, -119542473 AI650819 Xq23 Hs.102914 28

molecular_function

protein binding

cellular_component

DNA repair

ubiquitin-dependent protein catabolic process

response to DNA damage stimulus

cell cycle

cullin-RING ubiquitin ligase complex

ubiquitin protein ligase binding

Nucleotide excision repair

Ubiquitin mediated proteolysis

210299_s_at -0.545 12.759 -2.780 1.387e-02 0.246 -2.977 FHL1 four and a half LIM domains 1 X 135056526, 135057224, 135058402, 135079120, 135079731, 135106578, 135106720 AF063002 Xq26 Hs.435369 38

molecular_function

cellular_component

nucleus

cytoplasm

cytosol

multicellular organismal development

muscle organ development

zinc ion binding

organ morphogenesis

cell growth

cell differentiation

metal ion binding

 
1554705_at 0.336 5.210 2.780 1.387e-02 0.246 -2.977 SCARA5 scavenger receptor class A, member 5 (putative) 8 -27783668 BC033153 8p21.1 Hs.591833 6

receptor activity

scavenger receptor activity

iron ion binding

protein binding

plasma membrane

integral to plasma membrane

ion transport

cellular iron ion homeostasis

endocytosis

cell surface

cellular response to heat

iron ion transmembrane transport

protein homotrimerization

ferritin receptor activity

 
232051_at 0.313 4.399 2.780 1.388e-02 0.246 -2.977 CCDC102A coiled-coil domain containing 102A 16 -56103592 BC004307 16q21 Hs.644611 2    
209026_x_at -0.783 9.366 -2.780 1.388e-02 0.246 -2.977 TUBB tubulin, beta 6 30796135, 2136731, 1935034 AF141349 6p21.33 Hs.636480 Hs.706187 Hs.714425 39

nucleotide binding

GTPase activity

structural constituent of cytoskeleton

GTP binding

cytoskeleton

microtubule

cell motion

microtubule-based movement

flotillin complex

natural killer cell mediated cytotoxicity

MHC class I protein binding

spindle assembly

protein polymerization

Gap junction

Pathogenic Escherichia coli infection - EHEC

201687_s_at -0.450 7.295 -2.779 1.390e-02 0.246 -2.979 API5 apoptosis inhibitor 5 11 43290080 NM_006595 11p11.2 Hs.435771 15

binding

nucleus

spliceosomal complex

cytoplasm

apoptosis

anti-apoptosis

anti-apoptosis

anti-apoptosis

fibroblast growth factor binding

 
208642_s_at -0.402 8.198 -2.779 1.391e-02 0.246 -2.979 XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 2 216682264 AA205834 2q35 Hs.388739 148

nucleotide binding

telomere maintenance

nuclear telomere cap complex

DNA binding

double-stranded telomeric DNA binding

ATP-dependent DNA helicase activity

helicase activity

ATP binding

nucleus

nucleoplasm

chromosome

double-strand break repair via nonhomologous end joining

response to DNA damage stimulus

protein C-terminus binding

promoter binding

hydrolase activity

provirus integration

initiation of viral infection

Non-homologous end-joining

225953_at -0.312 8.944 -2.778 1.393e-02 0.246 -2.981 RPRD1A regulation of nuclear pre-mRNA domain containing 1A 18 -31823789 AI684281 18q12.2 Hs.464912 3    
224454_at -0.420 2.590 -2.778 1.394e-02 0.246 -2.981 ETNK1 ethanolamine kinase 1 12 22669342, 22669342 BC006111 12p12.1 Hs.29464 4

nucleotide binding

ethanolamine kinase activity

ATP binding

cytoplasm

phosphatidylethanolamine biosynthetic process

transferase activity

Glycerophospholipid metabolism

Metabolic pathways

1555600_s_at 0.236 4.705 2.778 1.394e-02 0.246 -2.981 APOL4 apolipoprotein L, 4 22 -34915121 AF305226 22q11.2-q13.2 Hs.115099 9

molecular_function

extracellular region

lipid metabolic process

lipid transport

lipid binding

lipoprotein metabolic process

 
206245_s_at -0.796 6.814 -2.777 1.395e-02 0.246 -2.982 IVNS1ABP influenza virus NS1A binding protein 1 -183532144 NM_006469 1q25.1-q31.1 Hs.497183 9

protein binding

nucleus

nucleoplasm

transcription factor complex

spliceosomal complex

cytoplasm

cytoskeleton

transcription from RNA polymerase III promoter

RNA splicing

response to virus

interspecies interaction between organisms

 
205726_at -0.710 6.840 -2.777 1.396e-02 0.246 -2.982 DIAPH2 diaphanous homolog 2 (Drosophila) X 95826317, 95826317 NM_006729 Xq21.33 Hs.226483 Hs.716101 14

cytokinesis

actin binding

receptor binding

cytoplasm

early endosome

Golgi apparatus

cytosol

multicellular organismal development

cellular component organization

Rho GTPase binding

actin cytoskeleton organization

cell differentiation

oogenesis

Regulation of actin cytoskeleton

206277_at -0.585 7.066 -2.777 1.397e-02 0.246 -2.983 P2RY2 purinergic receptor P2Y, G-protein coupled, 2 11 72606991, 72607149 NM_002564 11q13.5-q14.1 Hs.339 43

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

cellular ion homeostasis

signal transduction

activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger

purinergic nucleotide receptor activity, G-protein coupled

Neuroactive ligand-receptor interaction

227903_x_at -0.272 4.755 -2.777 1.397e-02 0.246 -2.983 C19orf20 chromosome 19 open reading frame 20 19 458496 AI990682 19p13.3 Hs.369613 6

cytoplasm

centrosome

cytoskeleton

microtubule

cilium

microtubule basal body

multicellular organismal development

spermatogenesis

flagellum

cell differentiation

axon

dendrite

cilium axoneme

flagellar axoneme

 
218252_at -0.673 5.045 -2.776 1.397e-02 0.246 -2.983 CKAP2 cytoskeleton associated protein 2 13 51927495 NM_018204 13q14 Hs.444028 Hs.449585 Hs.711762 17

cytoplasm

cytoskeleton

microtubule

apoptosis

cell cycle

 
228753_at -0.611 5.109 -2.776 1.397e-02 0.246 -2.983 LOC100128737 hypothetical LOC100128737 7   AI041217 7q22.3        
209455_at -0.394 7.651 -2.776 1.399e-02 0.246 -2.984 FBXW11 F-box and WD repeat domain containing 11 5 -171221160 BE963245 5q35.1 Hs.484138 14

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

cytoplasm

Wnt receptor signaling pathway

protein ubiquitination

modification-dependent protein catabolic process

Ubiquitin mediated proteolysis

Wnt signaling pathway

Hedgehog signaling pathway

201315_x_at 0.555 8.833 2.776 1.399e-02 0.246 -2.984 IFITM2 interferon induced transmembrane protein 2 (1-8D) 11 298106 NM_006435 11p15.5 Hs.709321 6

protein binding

immune response

response to biotic stimulus

membrane

integral to membrane

 
238047_at 2.294 5.314 2.776 1.399e-02 0.246 -2.984 RP13-102H20.1 hypothetical protein FLJ30058 X 130019896 AA405456 Xq26.1 Hs.22905 5

intracellular

signal transduction

 
205934_at -0.757 6.897 -2.776 1.399e-02 0.246 -2.985 PLCL1 phospholipase C-like 1 2 198377670, 198377777 NM_006226 2q33 Hs.153322 Hs.593586 8

phosphoinositide phospholipase C activity

signal transducer activity

calcium ion binding

cytoplasm

lipid metabolic process

intracellular signaling cascade

 
201146_at -0.522 8.217 -2.775 1.400e-02 0.247 -2.985 NFE2L2 nuclear factor (erythroid-derived 2)-like 2 2 -177803279, -177803278 NM_006164 2q31 Hs.715540 141

transcription factor activity

nucleus

cytoplasm

cytosol

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

sequence-specific DNA binding

protein dimerization activity

 
206398_s_at 0.342 4.807 2.775 1.402e-02 0.247 -2.986 CD19 CD19 molecule 16 28850760 NM_001770 16p11.2 Hs.652262 49

receptor signaling protein activity

protein binding

plasma membrane

integral to plasma membrane

cellular defense response

cell surface receptor linked signal transduction

external side of plasma membrane

B cell receptor signaling pathway

Hematopoietic cell lineage

B cell receptor signaling pathway

Primary immunodeficiency

212851_at -0.472 6.005 -2.775 1.402e-02 0.247 -2.986 DCUN1D4 DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) 4 52404032 AA194584 4q12 Hs.605388 10

nucleus

 
200697_at -0.404 9.866 -2.774 1.404e-02 0.247 -2.988 HK1 hexokinase 1 10 70699761, 70745615, 70748608 NM_000188 10q22 Hs.370365 40

nucleotide binding

hexokinase activity

hexokinase activity

ATP binding

mitochondrion

mitochondrial outer membrane

cytosol

cytosol

carbohydrate metabolic process

glycolysis

membrane

kinase activity

transferase activity

Glycolysis / Gluconeogenesis

Fructose and mannose metabolism

Galactose metabolism

Starch and sucrose metabolism

Amino sugar and nucleotide sugar metabolism

Streptomycin biosynthesis

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

Insulin signaling pathway

Type II diabetes mellitus

210243_s_at -0.430 6.341 -2.774 1.405e-02 0.247 -2.988 B4GALT3 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3 1 -159407724 AF038661 1q21-q23 Hs.321231 16

beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity

N-acetyllactosamine synthase activity

cytoplasm

Golgi apparatus

carbohydrate metabolic process

galactosyltransferase activity

membrane

integral to membrane

transferase activity, transferring glycosyl groups

manganese ion binding

metal ion binding

N-Glycan biosynthesis

Keratan sulfate biosynthesis

Glycosphingolipid biosynthesis - lacto and neolacto series

Metabolic pathways

1558044_s_at 0.584 7.195 2.773 1.406e-02 0.247 -2.989 EXOSC6 exosome component 6 16 -68841634 BF692729 16q22.1 Hs.660633 Hs.719211 9

3'-5'-exoribonuclease activity

exosome (RNase complex)

RNA binding

exonuclease activity

nucleus

nucleolus

cytoplasm

rRNA processing

RNA processing

hydrolase activity

RNA degradation

224162_s_at -0.668 7.935 -2.773 1.406e-02 0.247 -2.989 FBXO31 F-box protein 31 16 -85920444, -85920444 BC002985 16q24.2 Hs.567582 10

cell cycle

cyclin catabolic process

SCF ubiquitin ligase complex

modification-dependent protein catabolic process

cyclin binding

SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

G1 DNA damage checkpoint

cellular response to DNA damage stimulus

 
209244_s_at -0.287 8.255 -2.773 1.407e-02 0.247 -2.990 KIF1C kinesin family member 1C 17 4841999 BE885926 17p13.2 Hs.435120 8

nucleotide binding

microtubule motor activity

ATP binding

endoplasmic reticulum

Golgi apparatus

microtubule

retrograde vesicle-mediated transport, Golgi to ER

microtubule-based movement

 
213027_at -0.424 6.765 -2.773 1.407e-02 0.247 -2.990 TROVE2 TROVE domain family, member 2 1 191295375, 191295579, 191295579 AU146655 1q31 Hs.288178 24

RNA binding

protein binding

cytoplasm

transcription from RNA polymerase III promoter

ribonucleoprotein complex

Systemic lupus erythematosus

202271_at -0.353 7.657 -2.773 1.408e-02 0.247 -2.990 FBXO28 F-box protein 28 1 222368413 AB007952 1q42.11 Hs.64691 Hs.713992 10

modification-dependent protein catabolic process

 
201631_s_at -0.565 6.178 -2.772 1.409e-02 0.247 -2.991 IER3 immediate early response 3 6 -30818954, -2159551, -1957851 NM_003897 6p21.3 Hs.591785 37

protein binding

apoptosis

anti-apoptosis

anatomical structure morphogenesis

membrane

integral to membrane

 
200867_at -0.584 7.326 -2.771 1.412e-02 0.247 -2.993 RNF114 ring finger protein 114 20 47986320 AL031685 20q13.13 Hs.144949 9

protein binding

intracellular

multicellular organismal development

spermatogenesis

zinc ion binding

cell differentiation

metal ion binding

 
223254_s_at -0.402 4.410 -2.771 1.413e-02 0.247 -2.994 G2E3 G2/M-phase specific E3 ubiquitin ligase 14 30098079 AA887053 14q12 Hs.509008 Hs.605081 13

protein polyubiquitination

blastocyst development

ubiquitin-protein ligase activity

protein binding

intracellular

nucleus

nucleolus

cytoplasm

Golgi apparatus

protein modification process

multicellular organismal development

zinc ion binding

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

negative regulation of apoptosis

metal ion binding

 
1566191_at 0.316 4.870 2.770 1.414e-02 0.247 -2.994 SUZ12 suppressor of zeste 12 homolog (Drosophila) 17 27288156 AI907884 17q11.2 Hs.462732 31

intracellular

nucleus

zinc ion binding

chromatin modification

ESC/E(Z) complex

histone methyltransferase activity

regulation of transcription

metal ion binding

 
205771_s_at -0.887 7.942 -2.770 1.414e-02 0.247 -2.994 AKAP7 A kinase (PRKA) anchor protein 7 6 131508153, 131613196 AL137063 6q23 Hs.486483 9

catalytic activity

intracellular

cytoplasm

cytosol

plasma membrane

ion transport

intracellular signaling cascade

protein localization

biological_process

RNA metabolic process

apical plasma membrane

lateral plasma membrane

protein kinase A binding

protein kinase A binding

 
232366_at -0.633 5.571 -2.770 1.415e-02 0.247 -2.994 KIAA0232 KIAA0232 4 6835359 AF143884 4p16.1 Hs.79276 7

nucleotide binding

ATP binding

 
1555543_a_at -0.551 5.470 -2.770 1.415e-02 0.247 -2.994 CLCC1 chloride channel CLIC-like 1 1 -109273652 AB052917 1p13.3 Hs.658489 6

nucleus

endoplasmic reticulum

Golgi apparatus

membrane

integral to membrane

 
203357_s_at -0.709 5.769 -2.770 1.415e-02 0.247 -2.994 CAPN7 calpain 7 3 15222736 NM_014296 3p24 Hs.631920 6

calcium-dependent cysteine-type endopeptidase activity

intracellular

nucleus

proteolysis

peptidase activity

cysteine-type peptidase activity

 
217898_at -0.385 8.557 -2.770 1.415e-02 0.247 -2.995 C15orf24 chromosome 15 open reading frame 24 15 -32163515 NM_020154 15q14 Hs.160565 6

cytoplasm

biological_process

membrane

integral to membrane

purine nucleotide binding

 
201023_at -0.512 9.598 -2.770 1.416e-02 0.247 -2.995 TAF7 TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa 5 -140678240 NM_005642 5q31 Hs.438838 38

spermine transport

transcription factor activity

transcription coactivator activity

nucleus

transcription factor TFIID complex

nucleolus

cytoplasm

Golgi apparatus

transcription initiation from RNA polymerase II promoter

negative regulation of protein kinase activity

positive transcription elongation factor complex b

negative regulation of specific transcription from RNA polymerase II promoter

promoter binding

general RNA polymerase II transcription factor activity

specific transcriptional repressor activity

transcription initiation factor activity

estrogen receptor signaling pathway

transcription factor TFTC complex

histone acetyltransferase binding

negative regulation of histone acetylation

vitamin D receptor binding

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

thyroid hormone receptor binding

Basal transcription factors

223985_at -0.503 3.084 -2.770 1.416e-02 0.247 -2.995 FSD1L fibronectin type III and SPRY domain containing 1-like 9 107250135, 107250135, 107250145 AF316830 9q31 Hs.136901 4

molecular_function

cellular_component

biological_process

 
219457_s_at 0.368 5.367 2.770 1.416e-02 0.247 -2.995 RIN3 Ras and Rab interactor 3 14 92049877 NM_024832 14q32.12 Hs.326822 8

GTPase activator activity

protein binding

cellular_component

cytoplasm

early endosome

endocytosis

signal transduction

Ras GTPase binding

cytoplasmic vesicle

 
232298_at -0.949 7.873 -2.770 1.417e-02 0.247 -2.996 hCG_1806964 hypothetical LOC401093 3 -153463102 AK026494 3q25.1 Hs.201858 Hs.558914 Hs.719379 3    
205521_at -0.550 5.928 -2.769 1.419e-02 0.247 -2.998 EXOG endo/exonuclease (5'-3'), endonuclease G-like 3 38512766 BF511976 3p21.3 Hs.517897 6

nucleic acid binding

endonuclease activity

cellular_component

mitochondrion

mitochondrial inner membrane

biological_process

membrane

hydrolase activity

metal ion binding

Apoptosis

227788_at -0.534 8.148 -2.769 1.419e-02 0.247 -2.998 USP13 ubiquitin specific peptidase 13 (isopeptidase T-3) 3 180853626 AW295324 3q26.2-q26.3 Hs.175322 11

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

ubiquitin-dependent protein catabolic process

peptidase activity

zinc ion binding

metal ion binding

 
241602_at 0.260 6.195 2.769 1.420e-02 0.247 -2.998 ZNF582 zinc finger protein 582 19 -61586459 BG432829 19q13.43 Hs.244391 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
235114_x_at -0.476 3.985 -2.768 1.421e-02 0.247 -2.999 HOOK3 hook homolog 3 (Drosophila) 8 42871189 N67300 8p11.21 Hs.162852 13

cytoplasm

Golgi apparatus

cis-Golgi network

cytoskeleton

microtubule

endosome organization

lysosome organization

microtubule binding

endosome to lysosome transport

protein transport

HOPS complex

cytoplasmic microtubule organization

identical protein binding

early endosome to late endosome transport

Golgi localization

FHF complex

 
235515_at 0.330 3.510 2.768 1.421e-02 0.247 -2.999 C19orf46 chromosome 19 open reading frame 46 19 -41185841 AA827649 19q13.12 Hs.436743 2

actin binding

nucleus

membrane

integral to membrane

 
221522_at -0.660 6.708 -2.768 1.422e-02 0.247 -2.999 ANKRD27 ankyrin repeat domain 27 (VPS9 domain) 19 -37779746 AL136784 19q13.11 Hs.59236 12

guanyl-nucleotide exchange factor activity

GTPase activator activity

protein binding

cytoplasm

lysosome

early endosome

early endosome to late endosome transport

 
1568644_at 0.298 2.618 2.768 1.422e-02 0.247 -2.999 ZNF208 zinc finger protein 208 19 -21940736 BC038199 19p12 Hs.541334 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
200828_s_at -0.626 8.457 -2.768 1.422e-02 0.247 -2.999 ZNF207 zinc finger protein 207 17 27701269 BE871379 17q11.2 Hs.500775 7

transcription factor activity

intracellular

nucleus

nucleolus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
211170_s_at -0.375 3.545 -2.768 1.422e-02 0.247 -2.999 PDE10A phosphodiesterase 10A 6 -165660767 AF127480 6q26 Hs.348762 13

nucleotide binding

magnesium ion binding

cytoplasm

signal transduction

zinc ion binding

hydrolase activity

cAMP binding

cGMP binding

3',5'-cyclic-GMP phosphodiesterase activity

Purine metabolism

226876_at 0.533 7.080 2.768 1.423e-02 0.247 -3.000 FAM101B family with sequence similarity 101, member B 17 -289998 AI961778 17p13 Hs.345588 Hs.596411 Hs.719324 4    
208809_s_at -0.427 8.603 -2.767 1.423e-02 0.247 -3.000 C6orf62 chromosome 6 open reading frame 62 6 -24813069 AL136632 6p22.3 Hs.519930 6

molecular_function

cellular_component

intracellular

biological_process

 
210749_x_at -0.659 7.205 -2.767 1.424e-02 0.247 -3.000 DDR1 discoidin domain receptor tyrosine kinase 1 6 30959839, 30960305, 30964443, 2300465, 2300931, 2305069, 2098794, 2099260, 2103398 L11315 6p21.3 Hs.631988 60

nucleotide binding

transmembrane receptor protein tyrosine kinase activity

receptor activity

protein binding

ATP binding

extracellular region

integral to plasma membrane

protein amino acid phosphorylation

cell adhesion

transmembrane receptor protein tyrosine kinase signaling pathway

membrane

transferase activity

 
201581_at -0.514 8.777 -2.767 1.425e-02 0.247 -3.001 TMX4 thioredoxin-related transmembrane protein 4 20 -7909715 BF572868 20p12 Hs.169358 11

mitochondrion

transport

membrane

integral to membrane

electron transport chain

cell redox homeostasis

 
232631_at 0.420 4.685 2.766 1.426e-02 0.247 -3.002 CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) 5 31229552 AU150574 5p15.1-p14 Hs.171054 14

calcium ion binding

protein binding

nucleus

cytoplasm

plasma membrane

cell adhesion

homophilic cell adhesion

female gonad development

integral to membrane

 
201091_s_at -0.521 7.916 -2.766 1.427e-02 0.247 -3.002 CBX3 chromobox homolog 3 (HP1 gamma homolog, Drosophila) 7 26207623, 26207848 BE748755 7p15.2 Hs.381189 Hs.706294 45

condensed chromosome, centromeric region

chromatin

chromatin binding

nucleus

nuclear inner membrane

polytene chromosome chromocenter

nuclear euchromatin

spindle

chromatin assembly or disassembly

chromatin remodeling

negative regulation of transcription

general transcriptional repressor activity

enzyme binding

protein domain specific binding

nuclear centromeric heterochromatin

 
202983_at 0.437 7.487 2.766 1.427e-02 0.247 -3.002 HLTF helicase-like transcription factor 3 -150230593 AI760760 3q25.1-q26.1 Hs.3068 22

nucleotide binding

DNA binding

RNA polymerase II transcription factor activity

helicase activity

protein binding

ATP binding

nucleus

transcription

regulation of transcription from RNA polymerase II promoter

zinc ion binding

transcription activator activity

chromatin modification

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

ATPase activity

metal ion binding

 
208617_s_at -0.683 10.462 -2.766 1.428e-02 0.247 -3.003 PTP4A2 protein tyrosine phosphatase type IVA, member 2 1 -32146379 AF208850 1p35 Hs.470477 Hs.712749 Hs.713025 21

prenylated protein tyrosine phosphatase activity

protein binding

cytoplasm

early endosome

plasma membrane

protein amino acid dephosphorylation

hydrolase activity

 
221504_s_at -0.514 7.538 -2.766 1.428e-02 0.247 -3.003 ATP6V1H ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H 8 -54790667, -54790667 AF112204 8q11.2 Hs.491737 20

vacuolar proton-transporting V-type ATPase, V1 domain

protein binding

cytosol

plasma membrane

ion transport

endocytosis

vacuolar acidification

ATP synthesis coupled proton transport

ATP hydrolysis coupled proton transport

proton transport

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

ATPase activity

enzyme regulator activity

interspecies interaction between organisms

proton-transporting ATPase activity, rotational mechanism

regulation of defense response to virus by virus

Oxidative phosphorylation

Metabolic pathways

Lysosome

Vibrio cholerae infection

Epithelial cell signaling in Helicobacter pylori infection

225055_at -0.392 6.036 -2.765 1.430e-02 0.248 -3.004 LOC651250 hypothetical LOC651250 17 63609332 AV735241 17q24.2 Hs.293560 Hs.591212 Hs.647405 Hs.655146 Hs.663262 3    
201399_s_at -0.505 6.073 -2.765 1.431e-02 0.248 -3.005 TRAM1 translocation associated membrane protein 1 8 -71648226 NM_014294 8q13.3 Hs.491988 9

receptor activity

protein binding

endoplasmic reticulum

cotranslational protein targeting to membrane

protein transport

membrane

integral to membrane

intracellular protein transmembrane transport

 
225790_at -0.683 7.260 -2.764 1.433e-02 0.248 -3.006 MSRB3 methionine sulfoxide reductase B3 12 63958754 AL048386 12q14.3 Hs.339024 6

mitochondrion

endoplasmic reticulum

peptide-methionine-(S)-S-oxide reductase activity

zinc ion binding

oxidoreductase activity

metal ion binding

oxidation reduction

 
1559977_a_at 1.524 8.726 2.763 1.436e-02 0.248 -3.008 SLC25A34 solute carrier family 25, member 34 1 15935395 AL832282 1p36.21 Hs.631867 3

binding

mitochondrion

mitochondrial inner membrane

transport

membrane

integral to membrane

 
226050_at -1.051 6.706 -2.763 1.437e-02 0.248 -3.009 TMCO3 transmembrane and coiled-coil domains 3 13 113193308 AL576117 13q34 Hs.317593 6

cation transport

antiporter activity

solute:hydrogen antiporter activity

membrane

integral to membrane

 
224359_s_at -0.358 3.896 -2.762 1.438e-02 0.248 -3.009 HOOK3 hook homolog 3 (Drosophila) 8 42871189 AF241830 8p11.21 Hs.162852 13

cytoplasm

Golgi apparatus

cis-Golgi network

cytoskeleton

microtubule

endosome organization

lysosome organization

microtubule binding

endosome to lysosome transport

protein transport

HOPS complex

cytoplasmic microtubule organization

identical protein binding

early endosome to late endosome transport

Golgi localization

FHF complex

 
204366_s_at -0.350 7.179 -2.762 1.439e-02 0.249 -3.010 GTF3C2 general transcription factor IIIC, polypeptide 2, beta 110kDa 2 -27402224 NM_001521 2p23.3 Hs.75782 18

transcription factor TFIIIC complex

DNA binding

RNA polymerase III transcription factor activity

protein binding

nucleus

mitochondrion

peroxisome

transcription, DNA-dependent

oxygen and reactive oxygen species metabolic process

5S class rRNA transcription

tRNA transcription from RNA polymerase III promoter

 
213093_at -0.596 7.094 -2.762 1.440e-02 0.249 -3.010 PRKCA protein kinase C, alpha 17 61729387 AI471375 17q22-q23.2 Hs.531704 Hs.708867 455

nucleotide binding

inactivation of MAPK activity

negative regulation of protein amino acid phosphorylation

positive regulation of protein amino acid phosphorylation

regulation of the force of heart contraction

chondrocyte differentiation

calcium-dependent protein kinase C activity

calcium ion binding

protein binding

ATP binding

membrane fraction

nucleus

cytoplasm

mitochondrion

cytosol

cytosol

plasma membrane

negative regulation of protein kinase activity

cellular calcium ion homeostasis

regulation of muscle contraction

intracellular signaling cascade

zinc ion binding

negative regulation of cell proliferation

induction of apoptosis by extracellular signals

induction of apoptosis by intracellular signals

transferase activity

diacylglycerol binding

neutrophil chemotaxis

negative regulation of glucose import

negative regulation of insulin receptor signaling pathway

positive regulation of inflammatory response

regulation of peptidyl-tyrosine phosphorylation

induction of positive chemotaxis

MAPK signaling pathway

ErbB signaling pathway

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Wnt signaling pathway

VEGF signaling pathway

Focal adhesion

Tight junction

Gap junction

Natural killer cell mediated cytotoxicity

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Long-term potentiation

Long-term depression

GnRH signaling pathway

Melanogenesis

Vibrio cholerae infection

Pathogenic Escherichia coli infection - EHEC

Pathways in cancer

Glioma

Non-small cell lung cancer

218360_at -0.369 6.059 -2.761 1.441e-02 0.249 -3.011 RAB22A RAB22A, member RAS oncogene family 20 56318176 NM_020673 20q13.32 Hs.529044 14

nucleotide binding

GTPase activity

protein binding

protein binding

GTP binding

early endosome

plasma membrane

endocytosis

endosome organization

small GTPase mediated signal transduction

protein transport

Endocytosis

238664_s_at 0.240 4.773 2.761 1.441e-02 0.249 -3.011 MGC12916 hypothetical protein MGC12916 17 14147781 BF205828 17p12 Hs.597458      
207988_s_at -0.521 9.799 -2.760 1.443e-02 0.249 -3.013 ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa 2 218790118, 218790364 NM_005731 2q36.1 Hs.529303 23

actin binding

structural constituent of cytoskeleton

protein binding

cytoplasm

Golgi apparatus

Arp2/3 protein complex

focal adhesion

cell motion

positive regulation of actin filament polymerization

cell leading edge

cell projection

Fc gamma R-mediated phagocytosis

Regulation of actin cytoskeleton

222863_at -0.292 3.144 -2.760 1.444e-02 0.249 -3.013 ZBTB10 zinc finger and BTB domain containing 10 8 81561002 BG483802 8q13-q21.1 Hs.591868 4

DNA binding

protein binding

intracellular

nucleus

nucleolus

zinc ion binding

regulation of transcription

metal ion binding

 
237833_s_at 0.317 5.311 2.760 1.444e-02 0.249 -3.013 SNCAIP synuclein, alpha interacting protein 5 121675718 BF062366 5q23.1-q23.3 Hs.426463 40

protein binding

cytoplasm

dopamine metabolic process

presynaptic membrane

cell soma

regulation of neurotransmitter secretion

Parkinson's disease

230822_at 0.328 4.496 2.760 1.444e-02 0.249 -3.013 TMEM61 transmembrane protein 61 1 55219052 AI766925 1p32.3 Hs.663950 3

membrane

integral to membrane

 
201007_at 0.465 12.162 2.760 1.445e-02 0.249 -3.014 HADHB hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit 2 26321119 NM_000183 2p23 Hs.515848 23

3-hydroxyacyl-CoA dehydrogenase activity

acetyl-CoA C-acyltransferase activity

enoyl-CoA hydratase activity

mitochondrion

mitochondrial envelope

mitochondrial inner membrane

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

metabolic process

acyltransferase activity

transferase activity

mitochondrial nucleoid

Fatty acid elongation in mitochondria

Fatty acid metabolism

Valine, leucine and isoleucine degradation

Metabolic pathways

214370_at -0.533 2.682 -2.759 1.446e-02 0.249 -3.014 S100A8 S100 calcium binding protein A8 1 -151629131 AW238654 1q21 Hs.416073 91

calcium ion binding

protein binding

inflammatory response

 
1554462_a_at -0.810 7.075 -2.759 1.446e-02 0.249 -3.014 DNAJB9 DnaJ (Hsp40) homolog, subfamily B, member 9 7 107997591 AF115512 14q24.2-q24.3 7q31 Hs.6790 16

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

protein folding

heat shock protein binding

unfolded protein binding

 
218857_s_at 0.499 6.547 2.759 1.447e-02 0.249 -3.015 ASRGL1 asparaginase like 1 11 61861349 NM_025080 11q12.3 Hs.535326 9

N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity

cytoplasm

hydrolase activity

asparagine catabolic process via L-aspartate

Alanine, aspartate and glutamate metabolism

Cyanoamino acid metabolism

Nitrogen metabolism

Metabolic pathways

209142_s_at -0.713 10.214 -2.759 1.447e-02 0.249 -3.015 UBE2G1 ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast) 17 -4119260 BC002775 17p13.2 1q42 Hs.714345 12

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ubiquitin-dependent protein catabolic process

ligase activity

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

Parkinson's disease

213394_at 0.397 6.371 2.759 1.449e-02 0.249 -3.016 MAPKBP1 mitogen-activated protein kinase binding protein 1 15 39853923 AI674759 15q15.1 Hs.513661 6    
213019_at -0.397 7.854 -2.758 1.450e-02 0.249 -3.017 RANBP6 RAN binding protein 6 9 -6001019, -6001018 AI123233 9p24.1 Hs.167496 Hs.675725 5

binding

nucleus

cytoplasm

protein transport

 
228909_at 0.312 4.595 2.758 1.450e-02 0.249 -3.017 LOC642852 hypothetical LOC642852 21 45532394 AW131553 21q22.3 Hs.11637 Hs.676029 Hs.710382 2    
203208_s_at -0.319 7.452 -2.758 1.451e-02 0.249 -3.017 MTFR1 mitochondrial fission regulator 1 8 66719441, 66719441, 66744661 NM_014637 8q13.1 Hs.584788 8

mitochondrion

plasma membrane

 
208841_s_at -0.650 9.625 -2.758 1.451e-02 0.249 -3.017 G3BP2 GTPase activating protein (SH3 domain) binding protein 2 4 -76786976, -76786976 AB014560 4q21.1 Hs.303676 15

nucleotide binding

RNA binding

protein binding

intracellular

cytoplasm

transport

cytoplasmic sequestering of NF-kappaB

Ras protein signal transduction

receptor signaling complex scaffold activity

mRNA transport

 
217902_s_at -0.328 8.060 -2.757 1.453e-02 0.249 -3.018 HERC2 hect domain and RLD 2 15 -26029782 NM_004667 15q13 Hs.434890 Hs.610412 24

ubiquitin-protein ligase activity

guanyl-nucleotide exchange factor activity

protein binding

cellular_component

intracellular

anaphase-promoting complex

protein modification process

intracellular protein transport

zinc ion binding

protein ubiquitination

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

heme binding

regulation of mitotic metaphase/anaphase transition

metal ion binding

Ubiquitin mediated proteolysis

225915_at -1.030 5.996 -2.757 1.453e-02 0.249 -3.019 CAB39L calcium binding protein 39-like 13 -48780786, -48780786 AL138875 13q14.2 Hs.87159 9

protein binding

mTOR signaling pathway

223298_s_at 0.679 10.065 2.757 1.454e-02 0.249 -3.019 NT5C3 5'-nucleotidase, cytosolic III 7 -33020266, -33020266 AF312735 7p14.3 Hs.487933 22

nucleotide binding

magnesium ion binding

cytoplasm

endoplasmic reticulum

pyrimidine nucleoside metabolic process

5'-nucleotidase activity

5'-nucleotidase activity

2'-phosphotransferase activity

2'-phosphotransferase activity

nucleotide metabolic process

hydrolase activity

Purine metabolism

Pyrimidine metabolism

Nicotinate and nicotinamide metabolism

Biosynthesis of alkaloids derived from histidine and purine

Metabolic pathways

227179_at -0.395 8.385 -2.757 1.455e-02 0.249 -3.020 STAU2 staufen, RNA binding protein, homolog 2 (Drosophila) 8 -74624394 AK002152 8q13-q21.1 Hs.561815 11

double-stranded RNA binding

intracellular

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

microtubule

transport

 
220664_at 0.267 3.974 2.755 1.459e-02 0.249 -3.022 SPRR2C small proline-rich protein 2C (pseudogene) 1 -151379217 NM_006518 1q21-q22 Hs.2421 5    
216344_at 0.304 4.282 2.754 1.462e-02 0.250 -3.024 NPHP4 nephronophthisis 4 1 -5845456 AL117405 1p36.22 Hs.462348 13

structural molecule activity

protein binding

centrosome

cilium

microtubule basal body

signal transduction

visual behavior

membrane

cell-cell adhesion

actin cytoskeleton organization

 
218097_s_at 0.299 9.332 2.754 1.463e-02 0.250 -3.025 CUEDC2 CUE domain containing 2 10 -104172991 NM_024040 10q24.32 Hs.500874 6

protein binding

nucleus

cytoplasm

modification-dependent protein catabolic process

 
244409_at 0.427 6.286 2.754 1.463e-02 0.250 -3.025 CCDC154 coiled-coil domain containing 154 16 -1424390 AW612232 16p13.3 Hs.355232 1    
224860_at 0.781 6.256 2.753 1.464e-02 0.250 -3.025 C9orf123 chromosome 9 open reading frame 123 9 -7786490 AL137489 9p24.1 Hs.7517 4

membrane

integral to membrane

 
1554960_at 0.248 3.382 2.753 1.464e-02 0.250 -3.026 C1orf110 chromosome 1 open reading frame 110 1 -161090710 BC040018 1q23.3 Hs.407631 5    
227192_at 0.319 4.884 2.753 1.467e-02 0.250 -3.027 PRRT2 proline-rich transmembrane protein 2 16 29730909 BF060707 16p11.2 Hs.655071 5

response to biotic stimulus

membrane

integral to membrane

 
224931_at -0.364 7.334 -2.752 1.467e-02 0.250 -3.027 SLC41A3 solute carrier family 41, member 3 3 -127207889, -127207889 AK021925 3q21.2-q21.3 Hs.573007 5

plasma membrane

cation transport

cation transmembrane transporter activity

integral to membrane

 
235863_at -0.411 6.936 -2.752 1.468e-02 0.250 -3.028 JSRP1 junctional sarcoplasmic reticulum protein 1 19 -2203251 AI805145 19p13.3 Hs.712901 4

membrane

sarcoplasmic reticulum membrane

 
222612_at -0.576 4.881 -2.751 1.471e-02 0.250 -3.029 PSPC1 paraspeckle component 1 13 -19175008, -19146895 N32583 13q12.11 Hs.213198 9

nucleotide binding

RNA binding

protein binding

nucleus

nucleolus

cytoplasm

nuclear matrix

regulation of transcription

 
234192_s_at -0.538 8.574 -2.751 1.471e-02 0.250 -3.030 GKAP1 G kinase anchoring protein 1 9 -85544156 AK026487 9q21.32 Hs.522255 5

protein binding

Golgi apparatus

signal transduction

 
1556536_at 0.286 3.835 2.751 1.471e-02 0.250 -3.030 hCG_2044152 hCG2044152 2   BC040292 2q33.1 Hs.623895 1    
1556667_at -1.063 5.469 -2.751 1.472e-02 0.250 -3.030 LOC348751 hypothetical protein LOC348751 2   BC039445 2q33.1 Hs.471039 1    
231899_at -0.641 7.558 -2.750 1.473e-02 0.250 -3.031 ZC3H12C zinc finger CCCH-type containing 12C 11 109469296 AB051513 11q22.3 Hs.376289 3

magnesium ion binding

endonuclease activity

zinc ion binding

hydrolase activity

 
219656_at 0.304 6.482 2.750 1.474e-02 0.251 -3.032 PCDH12 protocadherin 12 5 -141304713 NM_016580 5q31 Hs.439474 10

calcium ion binding

protein binding

plasma membrane

integral to plasma membrane

cell-cell junction

cell adhesion

homophilic cell adhesion

neuron recognition

calcium-dependent cell-cell adhesion

 
227937_at 0.353 6.426 2.750 1.474e-02 0.251 -3.032 MYPOP Myb-related transcription factor, partner of profilin 19 -51085120 AA307731 19q13.32 Hs.515478 2

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

protein binding

nucleus

protein homodimerization activity

regulation of transcription

 
220975_s_at 0.251 6.295 2.749 1.476e-02 0.251 -3.033 C1QTNF1 C1q and tumor necrosis factor related protein 1 17 74531845, 74542066 NM_030968 17q25.3 Hs.201398 11

extracellular region

 
226220_at -0.358 5.644 -2.749 1.477e-02 0.251 -3.033 METTL9 methyltransferase like 9 16 21518356 BE551054 16p13-p12 Hs.279583 6    
215447_at 0.511 3.836 2.748 1.479e-02 0.251 -3.034 TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 2 -188051550, -188037202 AL080215 2q32 Hs.516578 118

serine-type endopeptidase inhibitor activity

extracellular region

extracellular region

extracellular space

plasma membrane

blood coagulation, extrinsic pathway

Complement and coagulation cascades

211084_x_at -0.306 5.254 -2.748 1.479e-02 0.251 -3.035 PRKD3 protein kinase D3 2 -37331149 Z25429 2p21 Hs.660757 Hs.716034 31

nucleotide binding

protein kinase C activity

protein binding

ATP binding

protein amino acid phosphorylation

activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway

intracellular signaling cascade

zinc ion binding

transferase activity

diacylglycerol binding

metal ion binding

 
204830_x_at 0.410 4.280 2.748 1.480e-02 0.251 -3.035 PSG5 pregnancy specific beta-1-glycoprotein 5 19 -48363734 NM_002781 19q13.2 Hs.654415 15

extracellular region

female pregnancy

 
233919_s_at -0.286 6.234 -2.748 1.481e-02 0.251 -3.036 HABP4 hyaluronan binding protein 4 9 98252234 BF213501 9q22.3-q31 Hs.494567 15

nucleus

cytoplasm

regulation of transcription

 
209510_at -0.434 8.058 -2.748 1.481e-02 0.251 -3.036 RNF139 ring finger protein 139 8 125556188 AF064801 8q24 Hs.492751 10

receptor activity

protein binding

endoplasmic reticulum

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

regulation of protein ubiquitination

metal ion binding

 
202915_s_at -0.497 6.998 -2.747 1.482e-02 0.251 -3.036 FAM20B family with sequence similarity 20, member B 1 177261696 BF115776 1q25 Hs.719217 9

extracellular region

 
1552257_a_at -0.290 5.887 -2.747 1.482e-02 0.251 -3.037 TTLL12 tubulin tyrosine ligase-like family, member 12 22 -41892571 NM_015140 22q13.31 Hs.517670 6

tubulin-tyrosine ligase activity

protein modification process

 
221433_at 1.656 5.684 2.747 1.484e-02 0.251 -3.037 FGF21 fibroblast growth factor 21 19 53951155 NM_019113 19q13.1-qter Hs.283015 17

extracellular region

soluble fraction

signal transduction

cell-cell signaling

growth factor activity

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

1565559_at 0.398 5.365 2.746 1.486e-02 0.251 -3.039 MAGIX MAGI family member, X-linked X 48906124, 48907213 AW418579 Xp11.23 Hs.193170 3

protein binding

 
217096_at 0.360 4.613 2.746 1.486e-02 0.251 -3.039 PCLO piccolo (presynaptic cytomatrix protein) 7 -82287731, -82221256 AC004082 7q11.23-q21.3 Hs.12376 14

transporter activity

calcium ion binding

profilin binding

calcium-dependent phospholipid binding

cytoskeleton

transport

cytoskeleton organization

synaptic vesicle

zinc ion binding

membrane

synaptic vesicle exocytosis

regulation of exocytosis

cAMP-mediated signaling

cell junction

insulin secretion

synapse

 
208135_at 0.283 4.231 2.746 1.487e-02 0.251 -3.039 HNF1B HNF1 homeobox B 17 -33120546 NM_006481 17cen-q21.3 Hs.191144 87

kidney development

transcription factor activity

nucleus

nucleolus

transcription activator activity

sequence-specific DNA binding

positive regulation of transcription, DNA-dependent

Maturity onset diabetes of the young

212163_at -0.547 6.725 -2.746 1.487e-02 0.251 -3.039 KIDINS220 kinase D-interacting substrate, 220kDa 2 -8786437 AB033076 2p24 Hs.9873 17

cytosol

intracellular signaling cascade

membrane

integral to membrane

Neurotrophin signaling pathway

208950_s_at 0.528 6.530 2.745 1.488e-02 0.251 -3.040 ALDH7A1 aldehyde dehydrogenase 7 family, member A1 5 -125906816 BC002515 5q31 Hs.483239 19

aldehyde dehydrogenase (NAD) activity

L-aminoadipate-semialdehyde dehydrogenase activity

cellular_component

mitochondrion

cellular aldehyde metabolic process

sensory perception of sound

oxidoreductase activity

oxidation reduction

Glycolysis / Gluconeogenesis

Ascorbate and aldarate metabolism

Fatty acid metabolism

Valine, leucine and isoleucine degradation

Lysine degradation

Arginine and proline metabolism

Histidine metabolism

Tryptophan metabolism

beta-Alanine metabolism

Glycerolipid metabolism

Pyruvate metabolism

Propanoate metabolism

3-Chloroacrylic acid degradation

Butanoate metabolism

Limonene and pinene degradation

Metabolic pathways

211514_at 0.342 3.691 2.745 1.488e-02 0.251 -3.040 DSTYK dual serine/threonine and tyrosine protein kinase 1 -203378254 AF068286 1q32.1 Hs.6874 9

nucleotide binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

transferase activity

 
201071_x_at -0.355 9.823 -2.745 1.489e-02 0.251 -3.040 SF3B1 splicing factor 3b, subunit 1, 155kDa 2 -197991765, -197964942 NM_012433 2q33.1 Hs.632554 34

nuclear mRNA splicing, via spliceosome

nuclear mRNA splicing, via spliceosome

protein binding

nucleus

spliceosomal complex

RNA splicing

nuclear speck

RNA splicing factor activity, transesterification mechanism

 
231940_at 0.514 6.712 2.745 1.489e-02 0.251 -3.041 ZNF529 zinc finger protein 529 19 -41762996, -41726357, -41726357 AI369933 19q13.13 Hs.708146 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
229587_at 0.301 6.369 2.745 1.489e-02 0.251 -3.041 UBA2 ubiquitin-like modifier activating enzyme 2 19 39611107 AA974493 19q12 Hs.631580 23

nucleotide binding

ATP binding

nucleus

protein modification process

enzyme activator activity

transcription factor binding

small protein activating enzyme activity

ligase activity

modification-dependent protein catabolic process

Ubiquitin mediated proteolysis

235313_at -0.985 11.573 -2.745 1.490e-02 0.251 -3.041 NRAP nebulin-related anchoring protein 10 -115338572 AA195854 10q24-q26 Hs.268788 14

actin binding

actin binding

protein binding

fascia adherens

muscle tendon junction

biological_process

zinc ion binding

metal ion binding

muscle alpha-actinin binding

 
235692_at 0.567 5.955 2.744 1.491e-02 0.251 -3.042 SH3KBP1 SH3-domain kinase binding protein 1 X -19462003, -19462003 AW024527 Xp22.1-p21.3 Hs.719268 58

molecular_function

protein binding

nucleus

nucleolus

cytoplasm

cytosol

cytoskeleton

plasma membrane

focal adhesion

endocytosis

apoptosis

cell-cell signaling

SH3 domain binding

synaptosome

cell junction

cytoplasmic vesicle

synapse

Endocytosis

216854_at 0.298 4.603 2.744 1.491e-02 0.251 -3.042 GDF11 growth differentiation factor 11 12 54423330 AF028333 12q13.2 Hs.600883 10

skeletal system development

ureteric bud development

cytokine activity

protein binding

extracellular region

extracellular space

nervous system development

mesoderm development

growth factor activity

negative regulation of cell proliferation

organ morphogenesis

spinal cord anterior/posterior patterning

pancreas development

growth

negative regulation of cell differentiation

cell maturation

camera-type eye morphogenesis

 
219196_at 0.225 2.063 2.744 1.492e-02 0.251 -3.042 SCG3 secretogranin III 15 49760841 NM_013243 15q21 Hs.232618 16

extracellular region

 
227511_at 0.278 5.267 2.744 1.492e-02 0.251 -3.043 SAMD4B sterile alpha motif domain containing 4B 19 44524947 BE963280 19q13.2 Hs.612332 8

protein binding

 
220129_at 0.991 4.303 2.743 1.494e-02 0.252 -3.044 SOHLH2 spermatogenesis and oogenesis specific basic helix-loop-helix 2 13 -35640346 NM_017826 13q13.3 Hs.124519 4

DNA binding

nucleus

multicellular organismal development

spermatogenesis

cell differentiation

transcription regulator activity

regulation of transcription

oogenesis

 
221234_s_at -0.681 4.931 -2.743 1.496e-02 0.252 -3.045 BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 6 -90692968 NM_021813 6q15 Hs.269764 Hs.716609 Hs.716710 23

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

sequence-specific DNA binding

protein dimerization activity

 
227055_at -1.072 6.216 -2.743 1.496e-02 0.252 -3.045 METTL7B methyltransferase like 7B 12 54361596 AI827972 12q13.2 Hs.51483 3

metabolic process

methyltransferase activity

transferase activity

 
218219_s_at -0.394 5.689 -2.742 1.498e-02 0.252 -3.046 LANCL2 LanC lantibiotic synthetase component C-like 2 (bacterial) 7 55400634 NM_018697 7q31.1-q31.33 Hs.595384 Hs.655117 9

catalytic activity

ATP binding

GTP binding

nucleus

cytoplasm

cytosol

plasma membrane

negative regulation of transcription

 
209659_s_at -0.400 8.563 -2.742 1.498e-02 0.252 -3.046 CDC16 cell division cycle 16 homolog (S. cerevisiae) 13 114018463 AF164598 13q34 Hs.374127 32

binding

nucleoplasm

cytoplasm

centrosome

cytosol

spindle microtubule

cell cycle

regulation of mitosis

cell proliferation

modification-dependent protein catabolic process

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

cell division

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

1561847_at 0.417 4.429 2.742 1.499e-02 0.252 -3.047 NUDT17 nudix (nucleoside diphosphate linked moiety X)-type motif 17 1 -144297851 AA481984 1q21.1 Hs.585066 4

magnesium ion binding

mitochondrion

hydrolase activity

manganese ion binding

 
1554628_at 0.553 3.887 2.741 1.500e-02 0.252 -3.047 ZNF57 zinc finger protein 57 19 2851895 BC028974 19p13.3 Hs.591378 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
223776_x_at -0.407 7.357 -2.741 1.500e-02 0.252 -3.047 TINF2 TERF1 (TRF1)-interacting nuclear factor 2 14 -23778690 BC005030 14q12 Hs.496191 30

chromosome, telomeric region

nuclear telomere cap complex

DNA binding

nucleus

nucleoplasm

chromosome

protein C-terminus binding

perinucleolar chromocenter

telomere maintenance via telomere lengthening

negative regulation of protein amino acid ADP-ribosylation

telomere assembly

positive regulation of telomere maintenance

negative regulation of telomere maintenance via telomerase

negative regulation of telomere maintenance via telomerase

telomeric DNA binding

negative regulation of epithelial cell proliferation

protein localization to telomere

 
224806_at 0.656 6.930 2.741 1.500e-02 0.252 -3.048 TRIM25 tripartite motif-containing 25 17 -52320268 BE563152 17q23.2 Hs.528952 22

transcription factor activity

protein binding

nucleus

nucleolus

cytoplasm

focal adhesion

zinc ion binding

cell junction

metal ion binding

RIG-I-like receptor signaling pathway

202514_at -0.622 5.772 -2.741 1.501e-02 0.252 -3.048 DLG1 discs, large homolog 1 (Drosophila) 3 -198253827 AW139131 3q29 Hs.292549 95

endothelial cell proliferation

guanylate kinase activity

phosphoprotein phosphatase activity

endoplasmic reticulum

endoplasmic reticulum membrane

cell-cell junction

actin filament organization

establishment or maintenance of cell polarity

protein C-terminus binding

cytoskeletal protein binding

postsynaptic density

potassium channel regulator activity

basolateral plasma membrane

cell-cell adhesion

protein kinase binding

phosphatase binding

cortical actin cytoskeleton organization

G1/S transition checkpoint

sarcolemma

interspecies interaction between organisms

synapse

postsynaptic membrane

negative regulation of mitotic cell cycle

T cell receptor signaling pathway

219913_s_at -0.569 6.603 -2.741 1.501e-02 0.252 -3.048 CRNKL1 crooked neck pre-mRNA splicing factor-like 1 (Drosophila) 20 -19963011 NM_016652 20p11.2 Hs.171342 7

spliceosome assembly

RNA binding

intracellular

nucleus

spliceosomal complex

cytoplasm

mRNA processing

RNA splicing

nuclear speck

 
206122_at 0.350 6.436 2.741 1.502e-02 0.252 -3.048 SOX15 SRY (sex determining region Y)-box 15 17 -7432221 NM_006942 17p13 Hs.95582 13

negative regulation of transcription from RNA polymerase II promoter

chromatin binding

transcription factor activity

RNA polymerase II transcription factor activity

protein binding

nucleus

cytoplasm

chromatin organization

male gonad development

cell differentiation

skeletal muscle regeneration

negative regulation of striated muscle development

positive regulation of transcription from RNA polymerase II promoter

myoblast development

 
231812_x_at -0.325 7.365 -2.740 1.503e-02 0.252 -3.049 PHAX phosphorylated adaptor for RNA export 5 125964531 AK023255 5q23.2 Hs.555731 Hs.719165 10

spliceosomal snRNP biogenesis

RNA binding

protein binding

nucleus

nucleoplasm

nucleoplasm

cytoplasm

cytosol

snRNA export from nucleus

Cajal body

protein transport

 
211676_s_at -1.011 6.362 -2.739 1.506e-02 0.252 -3.051 IFNGR1 interferon gamma receptor 1 6 -137560313 AF056979 6q23.3 Hs.520414 104

receptor activity

interferon-gamma receptor activity

integral to plasma membrane

signal transduction

response to virus

membrane

cytokine binding

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

205047_s_at 2.524 6.156 2.739 1.509e-02 0.253 -3.052 ASNS asparagine synthetase 7 -97319376, -97319376 NM_001673 7q21.3 Hs.489207 36

nucleotide binding

asparagine synthase (glutamine-hydrolyzing) activity

asparagine synthase (glutamine-hydrolyzing) activity

ATP binding

soluble fraction

cytosol

asparagine biosynthetic process

glutamine metabolic process

metabolic process

cellular amino acid biosynthetic process

ligase activity

cellular response to glucose starvation

negative regulation of apoptosis

positive regulation of mitotic cell cycle

Alanine, aspartate and glutamate metabolism

Nitrogen metabolism

Metabolic pathways

200033_at -0.547 9.789 -2.738 1.510e-02 0.253 -3.053 DDX5 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 17 -59924835 NM_004396 17q21 Hs.279806 50

nucleotide binding

RNA binding

RNA helicase activity

protein binding

ATP binding

nucleus

spliceosomal complex

nucleolus

mRNA processing

ATP-dependent helicase activity

RNA splicing

cell growth

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

 
223169_s_at -0.456 5.662 -2.738 1.510e-02 0.253 -3.053 RHOU ras homolog gene family, member U 1 226937491 AB051826 1q42.11-q42.3 Hs.647774 12

G1/S transition of mitotic cell cycle

nucleotide binding

magnesium ion binding

podosome

GTPase activity

protein binding

GTP binding

intracellular

Golgi apparatus

plasma membrane

focal adhesion

small GTPase mediated signal transduction

regulation of cell shape

Rac protein signal transduction

actin cytoskeleton organization

cell junction

cell projection

 
212302_at -0.511 6.571 -2.738 1.511e-02 0.253 -3.054 RTF1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) 15 39496593 AI192081 15q15.1 Hs.511096 9

DNA binding

protein binding

nucleus

nucleoplasm

nucleolus

cytoplasm

transcription initiation

histone modification

regulation of transcription

 
225125_at -0.370 8.006 -2.737 1.512e-02 0.253 -3.054 MMGT1 membrane magnesium transporter 1 X -134871896 BF978280 Xq26.3 Hs.110702 7

magnesium ion binding

cytoplasm

early endosome

endoplasmic reticulum

Golgi apparatus

plasma membrane

transport

cobalt ion transport

copper ion transport

cobalt ion transmembrane transporter activity

ferrous iron transmembrane transporter activity

magnesium ion transmembrane transporter activity

ferrous iron transport

magnesium ion transport

integral to membrane

 
217843_s_at -0.403 7.886 -2.737 1.513e-02 0.253 -3.055 MED4 mediator complex subunit 4 13 -47548092 NM_014166 13q14.2 Hs.181112 21

transcription cofactor activity

receptor activity

protein binding

nucleus

nucleolus

cytoplasm

regulation of transcription from RNA polymerase II promoter

transcription initiation from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

transcription activator activity

ligand-dependent nuclear receptor transcription coactivator activity

androgen receptor signaling pathway

vitamin D receptor binding

regulation of transcription

thyroid hormone receptor binding

 
205682_x_at 0.369 6.181 2.737 1.513e-02 0.253 -3.055 APOM apolipoprotein M 6 31731649, 3069795, 2871254 NM_019101 6p21.33 Hs.534468 38

lipid transporter activity

protein binding

extracellular region

cytosol

integral to plasma membrane

lipid transport

defense response

response to unfolded protein

response to nutrient

cholesterol efflux

cholesterol efflux

very-low-density lipoprotein particle

low-density lipoprotein particle

discoidal high-density lipoprotein particle

spherical high-density lipoprotein particle

high-density lipoprotein particle remodeling

high-density lipoprotein particle assembly

high-density lipoprotein particle clearance

lipoprotein metabolic process

cholesterol homeostasis

protein complex

reverse cholesterol transport

NF-kappaB binding

negative regulation of lipoprotein lipid oxidation

 
209036_s_at 0.277 12.037 2.737 1.514e-02 0.253 -3.056 MDH2 malate dehydrogenase 2, NAD (mitochondrial) 7 75515328 BC001917 7cen-q22 Hs.520967 26

binding

mitochondrion

mitochondrial inner membrane

mitochondrial matrix

mitochondrial matrix

glycolysis

tricarboxylic acid cycle

malate metabolic process

malate metabolic process

oxidoreductase activity

L-malate dehydrogenase activity

L-malate dehydrogenase activity

L-malate dehydrogenase activity

cellular carbohydrate metabolic process

oxidation reduction

Citrate cycle (TCA cycle)

Pyruvate metabolism

Glyoxylate and dicarboxylate metabolism

Carbon fixation in photosynthetic organisms

Reductive carboxylate cycle (CO2 fixation)

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

223477_s_at 0.409 7.142 2.737 1.515e-02 0.253 -3.056 C12orf65 chromosome 12 open reading frame 65 12 122283793, 122284254 AF061733 12q24.31 Hs.319128 2

translation release factor activity

translational termination

 
226782_at 0.747 9.912 2.736 1.516e-02 0.253 -3.057 SLC25A30 solute carrier family 25, member 30 13 -44865455 BF001919 13q14.13 Hs.591230 3

binding

mitochondrion

mitochondrial inner membrane

transport

mitochondrial transport

membrane

integral to membrane

 
1565698_at 0.340 2.355 2.736 1.517e-02 0.253 -3.057 HECTD2 HECT domain containing 2 10 93160075, 93160075 AI949651 10q23.32 Hs.596096 7

intracellular

protein modification process

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

 
226929_at 0.367 6.060 2.735 1.519e-02 0.253 -3.058 MTHFR 5,10-methylenetetrahydrofolate reductase (NADPH) 1 -11768373 AA524272 1p36.3 Hs.214142 1776

methylenetetrahydrofolate reductase (NADPH) activity

methylenetetrahydrofolate reductase (NADPH) activity

protein binding

cytosol

cellular amino acid metabolic process

methionine metabolic process

blood circulation

oxidoreductase activity

oxidation reduction

One carbon pool by folate

Methane metabolism

Metabolic pathways

212333_at -0.433 8.992 -2.735 1.519e-02 0.253 -3.058 FAM98A family with sequence similarity 98, member A 2 -33662232 AL049943 2p22.3 Hs.468140 2    
1569034_a_at 0.271 2.968 2.734 1.521e-02 0.254 -3.060 LOC440864 hypothetical gene supported by BC040724 2   BC019620 2p16.3 Hs.388171 1    
228372_at 0.384 6.539 2.734 1.522e-02 0.254 -3.060 C10orf128 chromosome 10 open reading frame 128 10 -50033896 AW204712 10q11.23 Hs.385493 1

membrane

integral to membrane

 
202778_s_at -0.383 6.655 -2.734 1.524e-02 0.254 -3.061 ZMYM2 zinc finger, MYM-type 2 13 19430809 NM_003453 13q11-q12 Hs.644041 29

protein binding

cellular_component

nucleus

biological_process

zinc ion binding

PML body

ubiquitin conjugating enzyme binding

regulation of transcription

metal ion binding

 
216064_s_at -0.674 5.354 -2.733 1.525e-02 0.254 -3.062 AGA aspartylglucosaminidase 4 -178588917 W27131 4q32-q33 Hs.207776 36

N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity

lysosome

protein deglycosylation

hydrolase activity

protein maturation

Other glycan degradation

Lysosome

1558212_at 0.595 5.993 2.733 1.526e-02 0.254 -3.062 FLJ35024 hypothetical LOC401491 9 -2525654 BC004474 9p24.2 Hs.416043 2    
222162_s_at -1.312 6.709 -2.733 1.526e-02 0.254 -3.063 ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 21 -27130476 AK023795 21q21.2 Hs.643357 44

ovulation from ovarian follicle

kidney development

metalloendopeptidase activity

protein binding

extracellular region

basement membrane

proteolysis

integrin-mediated signaling pathway

heparin binding

peptidase activity

zinc ion binding

negative regulation of cell proliferation

cytoplasmic vesicle

metal ion binding

heart trabecula formation

 
226618_at -0.739 7.177 -2.733 1.526e-02 0.254 -3.063 FLJ25076 probable ubiquitin-conjugating enzyme E2 FLJ25076 5 6501735 AW572911 5p15.31 Hs.126856 3

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

 
202484_s_at -0.405 7.103 -2.733 1.527e-02 0.254 -3.063 MBD2 methyl-CpG binding domain protein 2 18 -49983044, -49934572 AF072242 18q21 Hs.25674 50

histone deacetylase complex

negative regulation of transcription from RNA polymerase II promoter

heterochromatin

DNA binding

chromatin binding

satellite DNA binding

mRNA binding

nucleus

nucleus

cytoplasm

methyl-CpG binding

negative regulation of transcription

transcription repressor activity

positive regulation of Wnt receptor signaling pathway

siRNA binding

regulation of cell proliferation

maternal behavior

cellular protein complex assembly

C2H2 zinc finger domain binding

 
218864_at -0.369 6.337 -2.732 1.528e-02 0.254 -3.064 TNS1 tensin 1 2 -218372756 AF116610 2q35-q36 Hs.471381 16

actin binding

protein binding

cytoplasm

cytoskeleton

focal adhesion

cell junction

 
228375_at -0.851 5.406 -2.732 1.529e-02 0.254 -3.065 IGSF11 immunoglobulin superfamily, member 11 3 -120102168, -120102168 BE221674 3q13.32 Hs.112873 7

receptor activity

protein binding

plasma membrane

cell adhesion

integral to membrane

regulation of growth

 
220819_at 0.226 5.801 2.732 1.530e-02 0.254 -3.065 FRMD1 FERM domain containing 1 6 -168199312, -168199312 NM_024919 6q27 Hs.266746 2

binding

cytoskeleton

 
201841_s_at -0.746 11.444 -2.731 1.531e-02 0.254 -3.065 HSPB1 heat shock 27kDa protein 1 7 75769810 NM_001540 7q11.23 Hs.520973 153

nucleus

cytoplasm

spindle

cytoskeleton

regulation of translational initiation

anti-apoptosis

cell motion

response to unfolded protein

cell death

response to heat

cell surface

identical protein binding

MAPK signaling pathway

VEGF signaling pathway

1552395_at 0.345 6.430 2.730 1.535e-02 0.255 -3.068 TSSK3 testis-specific serine kinase 3 1 32600448 NM_052841 1p35-p34 Hs.512763 5

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

multicellular organismal development

spermatogenesis

transferase activity

cell differentiation

 
202038_at -0.468 8.304 -2.729 1.536e-02 0.255 -3.069 UBE4A ubiquitination factor E4A (UFD2 homolog, yeast) 11 117735511 NM_004788 11q23.3 Hs.602967 Hs.75275 12

ubiquitin ligase complex

protein polyubiquitination

protein binding

cytoplasm

ubiquitin-dependent protein catabolic process

ubiquitin-ubiquitin ligase activity

Ubiquitin mediated proteolysis

204117_at -0.394 8.773 -2.729 1.537e-02 0.255 -3.069 PREP prolyl endopeptidase 6 -105832198 NM_002726 6q22 Hs.436564 26

serine-type endopeptidase activity

cytoplasm

proteolysis

peptidase activity

 
224787_s_at -0.628 7.976 -2.728 1.540e-02 0.255 -3.071 RAB18 RAB18, member RAS oncogene family 10 27833254 AI333232 10p12.1 Hs.406799 24

nucleotide binding

GTPase activity

GTP binding

cellular_component

intracellular

plasma membrane

endocytosis

small GTPase mediated signal transduction

protein transport

 
217838_s_at -0.467 6.515 -2.728 1.541e-02 0.255 -3.072 EVL Enah/Vasp-like 14 99601503 NM_016337 14q32.2 Hs.125867 24

actin binding

profilin binding

cytoplasm

cytoskeleton

focal adhesion

cell surface receptor linked signal transduction

nervous system development

actin polymerization or depolymerization

organ morphogenesis

SH3 domain binding

lamellipodium

 
223049_at -0.393 7.509 -2.728 1.542e-02 0.255 -3.072 GRB2 growth factor receptor-bound protein 2 17 -70825751, -70825751 AF246238 17q24-q25 Hs.444356 Hs.708119 438

SH3/SH2 adaptor activity

epidermal growth factor receptor binding

Golgi apparatus

cytosol

cytosol

epidermal growth factor receptor signaling pathway

Ras protein signal transduction

Ras protein signal transduction

cell-cell signaling

insulin receptor signaling pathway

insulin receptor substrate binding

interspecies interaction between organisms

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

Dorso-ventral axis formation

Focal adhesion

Gap junction

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Neurotrophin signaling pathway

Insulin signaling pathway

GnRH signaling pathway

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Endometrial cancer

Glioma

Prostate cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Non-small cell lung cancer

214648_at 0.335 3.631 2.727 1.543e-02 0.255 -3.073 GPX5 glutathione peroxidase 5 (epididymal androgen-related protein) 6 28601767 AI207120 6p22.1 Hs.248129 14

glutathione peroxidase activity

extracellular region

lipid metabolic process

response to oxidative stress

oxidoreductase activity

oxidation reduction

Glutathione metabolism

Arachidonic acid metabolism

243481_at 0.309 4.148 2.726 1.546e-02 0.256 -3.074 RHOJ ras homolog gene family, member J 14 62740897 AA181207 14q23.2 Hs.656339 8

nucleotide binding

GTPase activity

protein binding

GTP binding

cellular_component

intracellular

plasma membrane

small GTPase mediated signal transduction

Rho protein signal transduction

regulation of cell shape

actin cytoskeleton organization

 
218761_at -0.445 7.007 -2.726 1.547e-02 0.256 -3.075 RNF111 ring finger protein 111 15 57067156 NM_017610 15q21 Hs.404423 13

protein binding

nucleus

cytoplasm

multicellular organismal development

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
203528_at -0.461 4.923 -2.726 1.548e-02 0.256 -3.076 SEMA4D sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D 9 -91181971, -91165525 NM_006378 9q22.2 Hs.494406 29

receptor activity

receptor binding

anti-apoptosis

immune response

cell adhesion

multicellular organismal development

nervous system development

membrane

integral to membrane

cell differentiation

positive regulation of axonogenesis

Axon guidance

235068_at -0.530 4.762 -2.725 1.550e-02 0.256 -3.077 ZDHHC21 zinc finger, DHHC-type containing 21 9 -14607032 AI807206 9p22.3 Hs.649522 4

zinc ion binding

acyltransferase activity

membrane

integral to membrane

transferase activity

metal ion binding

 
202698_x_at 0.339 12.077 2.725 1.550e-02 0.256 -3.077 COX4I1 cytochrome c oxidase subunit IV isoform 1 16 84390696 NM_001861 16q22-qter Hs.433419 17

cytochrome-c oxidase activity

protein binding

nucleus

mitochondrion

mitochondrial inner membrane

generation of precursor metabolites and energy

membrane

Oxidative phosphorylation

Metabolic pathways

Cardiac muscle contraction

Alzheimer's disease

Parkinson's disease

Huntington's disease

237465_at -0.487 6.427 -2.725 1.550e-02 0.256 -3.077 USP53 ubiquitin specific peptidase 53 4 120353229 BF196943 4q26 Hs.431081 Hs.595368 8

ubiquitin thiolesterase activity

cellular_component

ubiquitin-dependent protein catabolic process

biological_process

 
209209_s_at -0.454 6.661 -2.725 1.550e-02 0.256 -3.077 FERMT2 fermitin family homolog 2 (Drosophila) 14 -52395956, -52393739 AW469573 14q22.1 Hs.509343 12

stress fiber

protein binding

cytoplasm

cytoskeleton

focal adhesion

cell cortex

cell adhesion

regulation of cell shape

actin cytoskeleton organization

cell junction

filamentous actin

 
211721_s_at 0.364 3.175 2.725 1.551e-02 0.256 -3.077 ZNF551 zinc finger protein 551 19 62885168 BC005868 19q13.43 Hs.109540 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
221562_s_at 0.496 6.794 2.725 1.551e-02 0.256 -3.077 SIRT3 sirtuin (silent mating type information regulation 2 homolog) 3 (S. cerevisiae) 11 -205029 AF083108 11p15.5 Hs.716456 21

NAD+ ADP-ribosyltransferase activity

protein binding

cytoplasm

mitochondrion

mitochondrial matrix

chromatin silencing

protein amino acid ADP-ribosylation

protein amino acid deacetylation

zinc ion binding

membrane

hydrolase activity

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides

regulation of transcription

metal ion binding

NAD binding

 
203057_s_at -0.475 7.115 -2.725 1.552e-02 0.256 -3.078 PRDM2 PR domain containing 2, with ZNF domain 1 13899321, 13903936, 13903936, 13948462 AV724783 1p36.21 Hs.371823 39

transcription factor activity

intracellular

nucleus

Golgi apparatus

regulation of transcription, DNA-dependent

methyltransferase activity

zinc ion binding

transferase activity

histone-lysine N-methyltransferase activity

metal ion binding

 
209188_x_at -0.409 6.894 -2.724 1.552e-02 0.256 -3.078 DR1 down-regulator of transcription 1, TBP-binding (negative cofactor 2) 1 93584065 BC002809 1p22.1 Hs.348418 23

negative regulation of transcription from RNA polymerase II promoter

transcription corepressor activity

intracellular

nucleus

transcription factor binding

sequence-specific DNA binding

regulation of transcription

 
205508_at -0.406 7.804 -2.724 1.553e-02 0.256 -3.079 SCN1B sodium channel, voltage-gated, type I, beta 19 40213373, 40213373 NM_001037 19q13.1 Hs.436646 28

voltage-gated ion channel activity

voltage-gated sodium channel activity

ion transport

sodium ion transport

synaptic transmission

membrane

integral to membrane

sodium ion binding

 
201730_s_at -0.358 7.231 -2.724 1.554e-02 0.256 -3.079 TPR translocated promoter region (to activated MET oncogene) 1 -184547408 BF110993 1q25 Hs.279640 30

nucleotide binding

kinetochore

serine-tRNA ligase activity

protein binding

ATP binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

translation

seryl-tRNA aminoacylation

protein import into nucleus

mitotic cell cycle spindle assembly checkpoint

protein transport

membrane

mRNA transport

intracellular protein transmembrane transport

Pathways in cancer

Thyroid cancer

224761_at -0.368 9.104 -2.724 1.554e-02 0.256 -3.079 GNA13 guanine nucleotide binding protein (G protein), alpha 13 17 -60435870 AI928136 17q24.3 Hs.515018 57

nucleotide binding

patterning of blood vessels

in utero embryonic development

GTPase activity

signal transducer activity

protein binding

GTP binding

cell motion

signal transduction

G-protein coupled receptor protein signaling pathway

protein kinase cascade

Rho protein signal transduction

regulation of cell shape

membrane

guanyl nucleotide binding

cell differentiation

platelet activation

regulation of cell migration

melanosome

Vascular smooth muscle contraction

Long-term depression

Regulation of actin cytoskeleton

213434_at -0.412 6.097 -2.724 1.555e-02 0.256 -3.079 STX2 syntaxin 2 12 -129840099 H95263 12q24.33 Hs.437585 28

SNARE binding

cytokinesis

cell separation during cytokinesis

SNAP receptor activity

membrane fraction

soluble fraction

endosome

microsome

plasma membrane

intracellular protein transport

signal transduction

acrosome reaction

ectoderm development

organ morphogenesis

integral to membrane

vesicle-mediated transport

basolateral plasma membrane

apical plasma membrane

microvillus assembly

midbody

epithelial cell differentiation

plasma membrane fusion

calcium-dependent protein binding

gut morphogenesis

SNARE interactions in vesicular transport

204629_at 0.384 6.712 2.723 1.556e-02 0.256 -3.080 PARVB parvin, beta 22 42726505, 42751500 NM_013327 22q13.2-q13.33 Hs.475074 18

actin binding

protein binding

cytoplasm

cytoskeleton

plasma membrane

focal adhesion

cell adhesion

cell junction

Focal adhesion

215265_at 0.303 6.065 2.723 1.556e-02 0.256 -3.080 EMX1 empty spiracles homeobox 1 2 72998111 BF515060 2p14-p13 Hs.516090 9

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

brain development

post-embryonic development

cerebral cortex development

neuron differentiation

response to drug

sequence-specific DNA binding

 
235067_at -0.559 6.451 -2.723 1.556e-02 0.256 -3.080 MKLN1 muskelin 1, intracellular mediator containing kelch motifs 7 130445394, 130663134 D81987 7q32 Hs.44693 13

protein binding

cytoplasm

signal transduction

 
200927_s_at -0.615 7.252 -2.723 1.557e-02 0.256 -3.081 RAB14 RAB14, member RAS oncogene family 9 -122980236 AA919115 9q32-q34.11 Hs.371563 Hs.713585 19

nucleotide binding

GTPase activity

protein binding

GTP binding

intracellular

membrane fraction

lysosome

early endosome

late endosome

rough endoplasmic reticulum

Golgi stack

cytosol

plasma membrane

Golgi to endosome transport

small GTPase mediated signal transduction

neurotransmitter secretion

protein transport

vesicle-mediated transport

trans-Golgi network transport vesicle

nuclear envelope-endoplasmic reticulum network

intracellular transport

perinuclear region of cytoplasm

 
205151_s_at -0.467 6.215 -2.723 1.557e-02 0.256 -3.081 KIAA0644 KIAA0644 gene product 7 -28959498 NM_014817 7p14.3 Hs.719240 4

protein binding

membrane

integral to membrane

 
204497_at -0.532 8.496 -2.722 1.558e-02 0.256 -3.082 ADCY9 adenylate cyclase 9 16 -3952652 AB011092 16p13.3 Hs.391860 Hs.610484 19

nucleotide binding

magnesium ion binding

adenylate cyclase activity

ATP binding

integral to plasma membrane

cAMP biosynthetic process

intracellular signaling cascade

membrane

Purine metabolism

Calcium signaling pathway

Chemokine signaling pathway

Vascular smooth muscle contraction

Gap junction

GnRH signaling pathway

Melanogenesis

Vibrio cholerae infection

221527_s_at -0.666 7.473 -2.721 1.563e-02 0.256 -3.084 PARD3 par-3 partitioning defective 3 homolog (C. elegans) 10 -34440102 AF196185 10p11.21 Hs.131489 40

protein binding

cytoplasm

plasma membrane

tight junction

tight junction

cell cortex

protein complex assembly

cell cycle

establishment or maintenance of cell polarity

activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway

axonogenesis

asymmetric cell division

cell junction

Chemokine signaling pathway

Neuroactive ligand-receptor interaction

Endocytosis

Adherens junction

Tight junction

206137_at 0.348 4.715 2.721 1.563e-02 0.256 -3.084 RIMS2 regulating synaptic membrane exocytosis 2 8 104582151, 104900591 NM_014677 8q22.3 Hs.655271 18

protein binding

plasma membrane

intracellular protein transport

zinc ion binding

Rab GTPase binding

cell junction

synapse

metal ion binding

 
205112_at -0.768 4.586 -2.721 1.564e-02 0.256 -3.085 PLCE1 phospholipase C, epsilon 1 10 95743735 NM_016341 10q23 Hs.655033 35

Golgi membrane

activation of MAPK activity

regulation of cell growth

phosphoinositide phospholipase C activity

receptor signaling protein activity

guanyl-nucleotide exchange factor activity

calcium ion binding

intracellular

membrane fraction

cytoplasm

Golgi apparatus

cytosol

plasma membrane

phospholipid metabolic process

diacylglycerol biosynthetic process

regulation of smooth muscle contraction

cytoskeleton organization

epidermal growth factor receptor signaling pathway

activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger

elevation of cytosolic calcium ion concentration

activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway

heart development

regulation of G-protein coupled receptor protein signaling pathway

cell proliferation

lipid catabolic process

hydrolase activity

Ras GTPase binding

calcium-mediated signaling

calcium-mediated signaling

enzyme binding

glomerulus development

regulation of protein kinase activity

regulation of Ras protein signal transduction

inositol phosphate-mediated signaling

Inositol phosphate metabolism

Metabolic pathways

Calcium signaling pathway

Phosphatidylinositol signaling system

208485_x_at -0.505 7.301 -2.721 1.564e-02 0.256 -3.085 CFLAR CASP8 and FADD-like apoptosis regulator 2 201689060, 201689134, 201691631 NM_003879 2q33-q34 Hs.390736 163

cysteine-type endopeptidase activity

protein binding

proteolysis

anti-apoptosis

induction of apoptosis by extracellular signals

regulation of apoptosis

positive regulation of I-kappaB kinase/NF-kappaB cascade

interspecies interaction between organisms

Apoptosis

218105_s_at 0.532 7.228 2.721 1.564e-02 0.256 -3.085 MRPL4 mitochondrial ribosomal protein L4 19 10223639, 10223639 NM_015956 19p13.2 Hs.279652 10

structural constituent of ribosome

intracellular

mitochondrion

ribosome

translation

 
229071_at 0.470 4.287 2.721 1.564e-02 0.256 -3.085 C17orf100 chromosome 17 open reading frame 100 17 6495782 AI681419 17p13.1 Hs.262480 2    
205072_s_at -0.491 3.528 -2.720 1.565e-02 0.256 -3.085 XRCC4 X-ray repair complementing defective repair in Chinese hamster cells 4 5 82409072 NM_022406 5q13-q14 Hs.567359 93

condensed chromosome

in utero embryonic development

pro-B cell differentiation

DNA binding

nucleus

nucleus

cytosol

DNA-dependent protein kinase-DNA ligase 4 complex

double-strand break repair via nonhomologous end joining

double-strand break repair via nonhomologous end joining

double-strand break repair via nonhomologous end joining

response to DNA damage stimulus

central nervous system development

protein C-terminus binding

response to X-ray

response to gamma radiation

ligase activity

provirus integration

initiation of viral infection

DNA ligase IV complex

T cell differentiation in the thymus

immunoglobulin V(D)J recombination

negative regulation of neuron apoptosis

isotype switching

positive regulation of fibroblast proliferation

positive regulation of neurogenesis

DNA ligation during DNA repair

positive regulation of ligase activity

Non-homologous end-joining

203130_s_at -0.363 4.474 -2.720 1.565e-02 0.256 -3.085 KIF5C kinesin family member 5C 2 149349288 NM_004522 2q23.1 Hs.435557 Hs.660699 15

nucleotide binding

microtubule motor activity

protein binding

ATP binding

kinesin complex

microtubule

organelle organization

microtubule-based movement

 
222486_s_at -1.055 5.462 -2.720 1.567e-02 0.256 -3.087 ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 21 -27130476 AF060152 21q21.2 Hs.643357 44

ovulation from ovarian follicle

kidney development

metalloendopeptidase activity

protein binding

extracellular region

basement membrane

proteolysis

integrin-mediated signaling pathway

heparin binding

peptidase activity

zinc ion binding

negative regulation of cell proliferation

cytoplasmic vesicle

metal ion binding

heart trabecula formation

 
221645_s_at 0.636 4.360 2.719 1.568e-02 0.257 -3.087 ZNF83 zinc finger protein 83 19 -57807429, -57807429 M27877 19q13.3 Hs.467210 Hs.655934 Hs.659798 Hs.710125 9

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
225939_at -0.573 6.385 -2.719 1.569e-02 0.257 -3.088 EIF4E3 eukaryotic translation initiation factor 4E family member 3 3 -71811131, -71811131, -71811131, -71811131 AL161983 3p14 Hs.581355 3

RNA binding

translation initiation factor activity

cytoplasm

translational initiation

regulation of translation

 
212934_at -0.372 6.456 -2.719 1.570e-02 0.257 -3.088 UBXN2B UBX domain protein 2B 8 59486376 AI245523 8q12.1 Hs.155572 4

nucleus

cytoplasm

endoplasmic reticulum

Golgi apparatus

cytosol

 
225465_at 0.513 7.216 2.719 1.571e-02 0.257 -3.089 MAGI1 membrane associated guanylate kinase, WW and PDZ domain containing 1 3 -65319983, -65314945 AK023358 3p14.1 Hs.651939 24

nucleotide binding

ATP binding

plasma membrane

cell-cell junction

tight junction

protein complex assembly

cell adhesion

cell surface receptor linked signal transduction

protein C-terminus binding

Tight junction

221194_s_at -0.855 5.781 -2.718 1.572e-02 0.257 -3.090 RNFT1 ring finger protein, transmembrane 1 17 -55384504 NM_016125 17q23.1 Hs.531701 1

protein binding

zinc ion binding

membrane

integral to membrane

metal ion binding

 
1555943_at 0.296 4.872 2.717 1.576e-02 0.257 -3.091 PGAM5 phosphoglycerate mutase family member 5 12 131797508 CA307621 12q24.33 Hs.102558 6

nucleus

cytoplasm

 
202373_s_at -0.313 8.118 -2.717 1.577e-02 0.258 -3.092 RAB3GAP2 RAB3 GTPase activating protein subunit 2 (non-catalytic) 1 -218388232 AF255648 1q41 Hs.654849 Hs.708165 14

GTPase activator activity

protein binding

soluble fraction

cytoplasm

intracellular protein transport

regulation of GTPase activity

protein heterodimerization activity

 
1554129_a_at 0.310 5.428 2.716 1.580e-02 0.258 -3.094 ADIG adipogenin 20 36643251 BC029594 20q11.23 Hs.368028 3

nucleus

cytoplasm

membrane

integral to membrane

positive regulation of fat cell differentiation

white fat cell differentiation

brown fat cell differentiation

 
200985_s_at -0.432 10.405 -2.715 1.581e-02 0.258 -3.094 CD59 CD59 molecule, complement regulatory protein 11 -33681131, -33681131, -33681131 NM_000611 11p13 Hs.278573 Hs.709466 Hs.710641 107

protein binding

extracellular region

membrane fraction

plasma membrane

cell surface receptor linked signal transduction

blood coagulation

anchored to membrane

anchored to external side of plasma membrane

Complement and coagulation cascades

Hematopoietic cell lineage

223404_s_at -0.493 7.473 -2.715 1.581e-02 0.258 -3.095 C1orf25 chromosome 1 open reading frame 25 1 -183353840 AW512122 1q25.2 Hs.107149 6

RNA binding

tRNA (guanine-N2-)-methyltransferase activity

intracellular

behavior

tRNA processing

zinc ion binding

metal ion binding

 
208660_at 0.461 11.140 2.715 1.583e-02 0.258 -3.096 CS citrate synthase 12 -54951749 BC000105 12q13.2-q13.3 Hs.430606 Hs.715526 20

citrate (Si)-synthase activity

citrate (Si)-synthase activity

mitochondrion

mitochondrial matrix

mitochondrial matrix

tricarboxylic acid cycle

transferase activity

cellular carbohydrate metabolic process

Citrate cycle (TCA cycle)

Glyoxylate and dicarboxylate metabolism

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

227551_at -0.556 7.428 -2.715 1.583e-02 0.258 -3.096 FAM108B1 family with sequence similarity 108, member B1 9 -73669887, -73667187 BE856596 9q21.13 Hs.380389 4

extracellular region

hydrolase activity

 
206409_at 0.235 4.127 2.714 1.584e-02 0.258 -3.096 TIAM1 T-cell lymphoma invasion and metastasis 1 21 -31412606 NM_003253 21q22.1 21q22.11 Hs.517228 49

receptor signaling protein activity

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

protein binding

phospholipid binding

intracellular

plasma membrane

small GTPase mediated signal transduction

regulation of Rho protein signal transduction

ephrin receptor binding

ephrin receptor signaling pathway

positive regulation of axonogenesis

Chemokine signaling pathway

Regulation of actin cytoskeleton

207718_x_at 0.363 4.390 2.714 1.585e-02 0.258 -3.097 CYP2A7 cytochrome P450, family 2, subfamily A, polypeptide 7 19 -46073183 NM_000764 19q13.2 Hs.250615 13

endoplasmic reticulum

microsome

electron carrier activity

membrane

oxygen binding

heme binding

metal ion binding

oxidation reduction

aromatase activity

Caffeine metabolism

Retinol metabolism

Drug metabolism - cytochrome P450

Drug metabolism - other enzymes

Metabolic pathways

200093_s_at -0.346 10.848 -2.713 1.587e-02 0.258 -3.098 HINT1 histidine triad nucleotide binding protein 1 5 -130522773, -130522773 N32864 5q31.2 Hs.483305 26

protein kinase C binding

nucleus

cytoplasm

cytoskeleton

signal transduction

hydrolase activity

 
241009_at 0.411 4.310 2.713 1.588e-02 0.258 -3.098 FOXN4 forkhead box N4 12 -108200165 AI243313 12q24.11 Hs.528316 6

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

sequence-specific DNA binding

 
201067_at -0.535 8.272 -2.712 1.590e-02 0.259 -3.100 PSMC2 proteasome (prosome, macropain) 26S subunit, ATPase, 2 7 102775324 BF215487 7q22.1-q22.3 Hs.437366 56

nucleotide binding

proteasome complex

protein binding

ATP binding

nucleus

cytoplasm

cytosol

ubiquitin-dependent protein catabolic process

hydrolase activity

ATPase activity

protein catabolic process

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

interspecies interaction between organisms

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

231982_at 0.298 5.089 2.712 1.591e-02 0.259 -3.100 LOC284422 similar to HSPC323 19 -3425404 AF161441 19p13.3 Hs.130714 Hs.718889 2

membrane

integral to membrane

 
207910_at 0.328 3.144 2.712 1.592e-02 0.259 -3.101 SCGB1D1 secretoglobin, family 1D, member 1 11 61714285 NM_006552 11q13 Hs.202686 4

binding

extracellular region

extracellular space

 
1564658_at 0.311 6.940 2.712 1.592e-02 0.259 -3.101 C7orf52 chromosome 7 open reading frame 52 7 -100600497 BC037583 7q22.1 Hs.213044 2

N-acetyltransferase activity

metabolic process

acyltransferase activity

transferase activity

 
204950_at 0.473 6.268 2.712 1.593e-02 0.259 -3.101 CARD8 caspase recruitment domain family, member 8 19 -53403154 NM_014959 19q13.33 Hs.446146 Hs.655940 23

protein binding

intracellular

nucleus

cytoplasm

caspase activator activity

NACHT domain binding

protein homodimerization activity

regulation of apoptosis

negative regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of caspase activity

positive regulation of interleukin-1 beta secretion

 
219546_at -0.330 3.642 -2.712 1.593e-02 0.259 -3.101 BMP2K BMP2 inducible kinase 4 79916555, 79916555 NM_017593 4q21.21 Hs.146551 11

nucleotide binding

protein serine/threonine kinase activity

ATP binding

nucleus

protein amino acid phosphorylation

transferase activity

 
1561048_at -0.291 4.920 -2.711 1.593e-02 0.259 -3.102 RARS2 arginyl-tRNA synthetase 2, mitochondrial 6 -88280815 AF143874 6q16.1 Hs.485910 8

nucleotide binding

arginine-tRNA ligase activity

protein binding

ATP binding

cytoplasm

mitochondrion

mitochondrial matrix

arginyl-tRNA aminoacylation

ligase activity

Aminoacyl-tRNA biosynthesis

202590_s_at 0.433 8.502 2.711 1.594e-02 0.259 -3.102 PDK2 pyruvate dehydrogenase kinase, isozyme 2 17 45527694 AL574319 17q21.33 Hs.256667 28

two-component sensor activity

nucleotide binding

pyruvate dehydrogenase (acetyl-transferring) kinase activity

protein binding

ATP binding

nucleus

nucleolus

mitochondrion

mitochondrial matrix

carbohydrate metabolic process

glucose metabolic process

signal transduction

transferase activity

peptidyl-histidine phosphorylation

 
1552880_at 0.327 2.885 2.711 1.594e-02 0.259 -3.102 SEC16B SEC16 homolog B (S. cerevisiae) 1 -176164864 NM_033127 1q25.2 Hs.709633 10

endoplasmic reticulum

Golgi apparatus

protein transport

membrane

vesicle-mediated transport

 
202770_s_at -0.919 4.848 -2.711 1.595e-02 0.259 -3.102 CCNG2 cyclin G2 4 78297380 NM_004354 4q21.1 Hs.13291 12

cell cycle checkpoint

cytoplasm

cell cycle

mitosis

cell division

p53 signaling pathway

213286_at -0.536 5.192 -2.711 1.595e-02 0.259 -3.102 ZFR zinc finger RNA binding protein 5 -32390212 BF445199 5p13.3 Hs.435231 6

DNA binding

RNA binding

intracellular

nucleus

nucleolus

cytoplasm

multicellular organismal development

zinc ion binding

 
213688_at -0.362 4.880 -2.710 1.596e-02 0.259 -3.103 CALM1 calmodulin 1 (phosphorylase kinase, delta) 14 89933125 N25325 14q24-q31 Hs.282410 Hs.708270 181  

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Glioma

221073_s_at 0.305 6.206 2.710 1.599e-02 0.259 -3.104 NOD1 nucleotide-binding oligomerization domain containing 1 7 -30430667 NM_006092 7p15-p14 Hs.405153 72

nucleotide binding

ATP binding

intracellular

cytoplasm

induction of apoptosis

activation of caspase activity

inflammatory response

intracellular signaling cascade

caspase activator activity

detection of bacterium

positive regulation of interleukin-6 production

positive regulation of tumor necrosis factor production

positive regulation of stress-activated MAPK cascade

interleukin-8 biosynthetic process

identical protein binding

peptidoglycan binding

regulation of apoptosis

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of JNK cascade

CARD domain binding

defense response to Gram-positive bacterium

protein oligomerization

positive regulation of ERK1 and ERK2 cascade

Epithelial cell signaling in Helicobacter pylori infection

225806_at 0.552 3.152 2.710 1.599e-02 0.259 -3.105 JUB jub, ajuba homolog (Xenopus laevis) 14 -22510249, -22510249 AI289311 14q11.2 Hs.655832 16

protein binding

nucleus

cytoplasm

centrosome

cytoskeleton

plasma membrane

focal adhesion

cell cycle

cell adhesion

zinc ion binding

lamellipodium

lamellipodium assembly

cell junction

regulation of cell migration

wound healing, spreading of epidermal cells

regulation of GTPase activity

metal ion binding

focal adhesion formation

 
213036_x_at 0.294 6.100 2.709 1.600e-02 0.259 -3.105 ATP2A3 ATPase, Ca++ transporting, ubiquitous 17 -3773917 Y15724 17p13.3 Hs.513870 27

nucleotide binding

magnesium ion binding

calcium-transporting ATPase activity

calcium ion binding

protein binding

ATP binding

nucleus

ATP biosynthetic process

cation transport

calcium ion transport

metabolic process

membrane

integral to membrane

sarcoplasmic reticulum

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

Calcium signaling pathway

Alzheimer's disease

239261_s_at 0.305 4.830 2.709 1.601e-02 0.259 -3.106 CORIN corin, serine peptidase 4 -47290774 AI338960 4p13-p12 Hs.518618 15

serine-type endopeptidase activity

scavenger receptor activity

plasma membrane

integral to plasma membrane

proteolysis

lipid metabolic process

regulation of blood pressure

peptidase activity

anatomical structure morphogenesis

cell surface

 
226370_at -0.702 5.697 -2.709 1.602e-02 0.259 -3.107 KLHL15 kelch-like 15 (Drosophila) X -23911756 BG149487 Xp22.1-p21 Hs.495854 6

protein binding

modification-dependent protein catabolic process

 
1560553_at 0.274 4.666 2.709 1.603e-02 0.259 -3.107 TIAF1 TGFB1-induced anti-apoptotic factor 1 17 -24424664 BC011938 17q11.2 Hs.462590 15

molecular_function

nucleus

apoptosis

anti-apoptosis

I-kappaB kinase/NF-kappaB cascade

 
228039_at -0.491 7.700 -2.708 1.603e-02 0.259 -3.107 DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 5 134122359 AI765169 5q31.1 Hs.406549 9

nucleotide binding

RNA binding

helicase activity

ATP binding

nucleus

mRNA processing

ATP-dependent helicase activity

RNA splicing

Cajal body

nuclear speck

hydrolase activity

 
202598_at -0.841 8.934 -2.708 1.605e-02 0.259 -3.108 S100A13 S100 calcium binding protein A13 1 -151857899, -151857899, -151857899, -151857899, -151857899 NM_005979 1q21 Hs.516505 24

calcium ion binding

cellular_component

cell differentiation

 
233584_at 0.362 3.745 2.707 1.608e-02 0.260 -3.110 C20orf62 chromosome 20 open reading frame 62 20   AI138237 20q13.12 Hs.357589 3    
210203_at -0.729 5.704 -2.706 1.610e-02 0.260 -3.111 CNOT4 CCR4-NOT transcription complex, subunit 4 7 -134723303, -134697088 R64001 7q22-qter Hs.490224 7

nucleotide binding

RNA binding

protein binding

nucleus

cytoplasm

zinc ion binding

ligase activity

modification-dependent protein catabolic process

regulation of transcription

metal ion binding

RNA degradation

218100_s_at -0.385 6.152 -2.705 1.613e-02 0.260 -3.112 IFT57 intraflagellar transport 57 homolog (Chlamydomonas) 3 -109362348 NM_018010 3q13.12-q13.13 Hs.412196 13

DNA binding

protein binding

Golgi apparatus

cilium

microtubule basal body

activation of caspase activity

regulation of apoptosis

regulation of transcription

Huntington's disease

1558143_a_at 0.340 4.555 2.705 1.613e-02 0.260 -3.113 BCL2L11 BCL2-like 11 (apoptosis facilitator) 2 111594961, 111594961 AK027160 2q13 Hs.469658 143

peripheral to membrane of membrane fraction

in utero embryonic development

B cell homeostasis

B cell apoptosis

kidney development

myeloid cell homeostasis

protein binding

cytoplasm

mitochondrion

mitochondrial outer membrane

cytosol

plasma membrane

induction of apoptosis

cell-matrix adhesion

spermatogenesis

microtubule binding

male gonad development

activation of pro-apoptotic gene products

post-embryonic development

mammary gland development

tube lumen formation

odontogenesis of dentine-containing tooth

T cell homeostasis

ear development

regulation of organ growth

regulation of pigmentation during development

spleen development

thymus development

post-embryonic organ morphogenesis

 
208750_s_at -0.749 8.765 -2.705 1.614e-02 0.260 -3.113 ARF1 ADP-ribosylation factor 1 1 226336983, 226337473 AA580004 1q42 Hs.286221 97

Golgi membrane

nucleotide binding

GTPase activity

receptor signaling protein activity

protein binding

GTP binding

intracellular

Golgi apparatus

cytosol

cytosol

plasma membrane

retrograde vesicle-mediated transport, Golgi to ER

small GTPase mediated signal transduction

protein transport

membrane organization

vesicle-mediated transport

sarcomere

COPI coating of Golgi vesicle

Vibrio cholerae infection

205168_at 0.294 4.954 2.705 1.615e-02 0.260 -3.113 DDR2 discoidin domain receptor tyrosine kinase 2 1 160868851 NM_006182 1q23.3 Hs.275757 Hs.593833 26

nucleotide binding

transmembrane receptor protein tyrosine kinase activity

receptor activity

ATP binding

integral to plasma membrane

protein amino acid phosphorylation

cell adhesion

signal transduction

transmembrane receptor protein tyrosine kinase signaling pathway

positive regulation of cell proliferation

membrane

transferase activity

 
208913_at -0.487 7.188 -2.705 1.615e-02 0.260 -3.114 GGA2 golgi associated, gamma adaptin ear containing, ARF binding protein 2 16 -23383143 AA868560 16p12 Hs.460336 37

protein binding

intracellular

endosome

trans-Golgi network

intracellular protein transport

membrane

vesicle-mediated transport

membrane coat

clathrin adaptor complex

ADP-ribosylation factor binding

Lysosome

225087_at -0.626 8.708 -2.705 1.615e-02 0.260 -3.114 C16orf63 chromosome 16 open reading frame 63 16 -15867077 AA524072 16p13.11 Hs.514179 3    
1556919_at 0.348 4.185 2.705 1.615e-02 0.260 -3.114 LEPR leptin receptor 1 65658905, 65658905, 65658905 BC035120 1p31 Hs.705413 260

angiogenesis

ovulation from ovarian follicle

cytokine receptor activity

protein binding

extracellular region

extracellular space

plasma membrane

energy reserve metabolic process

cell surface receptor linked signal transduction

multicellular organismal development

female pregnancy

cholesterol metabolic process

integral to membrane

protein-hormone receptor activity

peptide hormone binding

cellular response to nutrient levels

response to nicotine

response to chemical stimulus

eating behavior

response to estrogen stimulus

negative regulation of hydrolase activity

Cytokine-cytokine receptor interaction

Neuroactive ligand-receptor interaction

Jak-STAT signaling pathway

Adipocytokine signaling pathway

1553391_at 0.367 2.680 2.704 1.616e-02 0.260 -3.114 CXorf58 chromosome X open reading frame 58 X 23836043 NM_152761 Xp22.11 Hs.351265 4    
204171_at -0.390 5.842 -2.704 1.616e-02 0.260 -3.114 RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 17 55325224 NM_003161 17q23.1 Hs.463642 123

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

cytosol

protein amino acid phosphorylation

signal transduction

transferase activity

synaptosome

cell junction

synapse

ErbB signaling pathway

mTOR signaling pathway

TGF-beta signaling pathway

Fc gamma R-mediated phagocytosis

Insulin signaling pathway

Acute myeloid leukemia

225333_at 0.317 4.335 2.704 1.616e-02 0.260 -3.114 ZNF496 zinc finger protein 496 1 -245530244 AI218383 1q44 Hs.654803 5

transcription factor activity

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1557895_at 0.290 2.324 2.703 1.620e-02 0.260 -3.116 FLJ35934 FLJ35934 protein 17   BC033201 17p11.2 Hs.375092 2    
212460_at -0.463 6.872 -2.703 1.620e-02 0.260 -3.116 C14orf147 chromosome 14 open reading frame 147 14 -33971894 BE738425 14q13.1 Hs.269909 5

serine C-palmitoyltransferase activity

protein binding

endoplasmic reticulum

membrane

integral to membrane

serine C-palmitoyltransferase complex

sphingolipid biosynthetic process

 
1560274_at -0.355 2.481 -2.703 1.622e-02 0.261 -3.117 WTAP Wilms tumor 1 associated protein 6 160068141, 160068141, 160068609 BF679507 6q25-q27 Hs.446091 Hs.710715 16

nucleus

nucleolus

mRNA processing

cell cycle

RNA splicing

nuclear membrane

 
216342_x_at 0.370 11.005 2.702 1.623e-02 0.261 -3.118 RPS4X ribosomal protein S4, X-linked X -71409177 AL121916 Xq13.1 Hs.118076 25

structural constituent of ribosome

intracellular

cytosol

ribosome

polysome

translational elongation

multicellular organismal development

positive regulation of cell proliferation

rRNA binding

cytosolic small ribosomal subunit

cytosolic small ribosomal subunit

positive regulation of translation

Ribosome

229121_at 0.288 5.331 2.702 1.625e-02 0.261 -3.119 CMKLR1 chemokine-like receptor 1 12 -107205951, -107205951 BE857553 12q24.1 Hs.197143 14

skeletal system development

receptor activity

G-protein coupled receptor activity

chemokine receptor activity

plasma membrane

integral to plasma membrane

chemotaxis

immune response

signal transduction

G-protein coupled receptor protein signaling pathway

 
208641_s_at -0.340 9.819 -2.701 1.627e-02 0.261 -3.120 RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 7 6380650 BC004247 7p22 Hs.413812 406

nucleotide binding

GTPase activity

GTP binding

intracellular

cytosol

plasma membrane

cell motion

inflammatory response

cell adhesion

small GTPase mediated signal transduction

anatomical structure morphogenesis

regulation of hydrogen peroxide metabolic process

positive regulation of lamellipodium assembly

enzyme binding

actin filament polymerization

GTP-dependent protein binding

ruffle organization

positive regulation of Rho protein signal transduction

melanosome

negative regulation of receptor-mediated endocytosis

localization within membrane

regulation of respiratory burst

MAPK signaling pathway

Chemokine signaling pathway

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Focal adhesion

Adherens junction

Toll-like receptor signaling pathway

Natural killer cell mediated cytotoxicity

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Amyotrophic lateral sclerosis (ALS)

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

217868_s_at -0.287 8.863 -2.700 1.629e-02 0.261 -3.122 METTL9 methyltransferase like 9 16 21518356 NM_016025 16p13-p12 Hs.279583 6    
218844_at 0.423 7.076 2.700 1.630e-02 0.261 -3.122 ACSF2 acyl-CoA synthetase family member 2 17 45858517 NM_025149 17q21.33 Hs.288959 7

nucleotide binding

ATP binding

mitochondrion

lipid metabolic process

fatty acid metabolic process

metabolic process

ligase activity

 
219828_at 0.279 5.830 2.699 1.632e-02 0.262 -3.123 C9orf86 chromosome 9 open reading frame 86 9 138822201 NM_024718 9q34.3 Hs.370555 11

nucleotide binding

protein binding

GTP binding

nucleus

cytoplasm

small GTPase mediated signal transduction

 
213499_at 0.317 5.155 2.699 1.633e-02 0.262 -3.124 CLCN2 chloride channel 2 3 -185547033 NM_004366 3q27-q28 Hs.436847 28

voltage-gated ion channel activity

voltage-gated chloride channel activity

ion transport

chloride transport

membrane

integral to membrane

chloride ion binding

chloride channel complex

 
224534_at -0.698 3.620 -2.699 1.634e-02 0.262 -3.124 KREMEN1 kringle containing transmembrane protein 1 22 27799065, 27799105 AB059618 22q12.1 Hs.229335 11

molecular_function

membrane fraction

cell communication

membrane

integral to membrane

Wnt receptor signaling pathway

 
229849_at -0.669 8.410 -2.699 1.634e-02 0.262 -3.124 WIPF3 WAS/WASL interacting protein family, member 3 7 29840865 AI807950 7p14.3 Hs.709280 5

actin binding

cytoplasm

multicellular organismal development

spermatogenesis

cell differentiation

 
242268_at -0.510 3.571 -2.699 1.635e-02 0.262 -3.125 CUGBP2 CUG triplet repeat, RNA binding protein 2 10 11087264, 11099898, 11246998 BE157991 10p13 Hs.309288 25

nucleotide binding

RNA binding

protein binding

nucleus

cytoplasm

mRNA processing

regulation of heart contraction

 
235389_at -0.438 6.704 -2.698 1.635e-02 0.262 -3.125 PHF20 PHD finger protein 20 20 33823336 BG168139 20q11.22-q11.23 Hs.517044 11

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
242844_at -0.431 5.604 -2.698 1.636e-02 0.262 -3.125 PGGT1B protein geranylgeranyltransferase type I, beta subunit 5 -114574425 AA989220 5q22.3 Hs.254006 8

prenyltransferase activity

CAAX-protein geranylgeranyltransferase activity

CAAX-protein geranylgeranyltransferase complex

zinc ion binding

transferase activity

protein amino acid geranylgeranylation

metal ion binding

 
200713_s_at -0.387 7.879 -2.698 1.636e-02 0.262 -3.126 MAPRE1 microtubule-associated protein, RP/EB family, member 1 20 30871359 NM_012325 20q11.1-q11.23 Hs.472437 31

cytoplasm

Golgi apparatus

spindle

cytoplasmic microtubule

cell cycle

mitosis

protein C-terminus binding

cell proliferation

cortical microtubule cytoskeleton

negative regulation of microtubule polymerization

cell projection membrane

cell projection

microtubule plus-end binding

cell division

 
226058_at 0.361 5.513 2.698 1.637e-02 0.262 -3.126 B3GNT9 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 16 -65739505 AI651445 16q22.1 Hs.718517 2

Golgi apparatus

protein amino acid glycosylation

galactosyltransferase activity

membrane

integral to membrane

transferase activity, transferring glycosyl groups

 
200896_x_at -0.335 9.699 -2.698 1.638e-02 0.262 -3.126 HDGF hepatoma-derived growth factor (high-mobility group protein 1-like) 1 -154978522, -154978522, -154978522 NM_004494 1q21-q23 Hs.506748 22

nucleotide binding

DNA binding

extracellular space

nucleus

cytoplasm

signal transduction

growth factor activity

heparin binding

cell proliferation

regulation of transcription

 
203622_s_at -0.562 7.314 -2.698 1.639e-02 0.262 -3.127 PNO1 partner of NOB1 homolog (S. cerevisiae) 2 68238508 NM_020143 2p14 Hs.262858 8

RNA binding

nucleus

nucleolus

 
230367_at -1.853 9.957 -2.697 1.639e-02 0.262 -3.127 SMTNL1 smoothelin-like 1 11 57065554 AI359511 11q12.1 Hs.68756 2

response to activity

peptidyl-serine phosphorylation

M band

I band

response to drug

contractile fiber

positive regulation of vasoconstriction

negative regulation of vasodilation

muscle organ morphogenesis

 
1561093_at 0.312 6.479 2.697 1.640e-02 0.262 -3.127 SLC22A25 solute carrier family 22, member 25 11 -62687871 AK091990 11q12.3 Hs.332119 5

transport

membrane

integral to membrane

 
209100_at -0.618 8.381 -2.697 1.640e-02 0.262 -3.128 IFRD2 interferon-related developmental regulator 2 3 -50300168 BC001327 3p21.3 Hs.315177 Hs.719200 7

binding

cellular_component

cell proliferation

cell differentiation

 
205113_at -0.556 2.959 -2.697 1.641e-02 0.262 -3.128 NEFM neurofilament, medium polypeptide 8 24827178, 24828359 NM_005382 8p21 Hs.458657 Hs.615287 24

microtubule cytoskeleton organization

structural constituent of cytoskeleton

cytoskeleton

neurofilament

axon cargo transport

axon

regulation of axon diameter

neuromuscular junction

intermediate filament bundle assembly

neurofilament cytoskeleton organization

Amyotrophic lateral sclerosis (ALS)

231849_at -0.766 3.849 -2.697 1.642e-02 0.262 -3.128 KRT80 keratin 80 12 -50849046 AL162069 12q13.13 Hs.140978 3

structural molecule activity

keratin filament

 
219365_s_at 0.359 5.565 2.696 1.642e-02 0.262 -3.129 CAMKV CaM kinase-like vesicle-associated 3 -49870425 NM_024046 3p21.31 Hs.145156 10

protein serine/threonine kinase activity

ATP binding

plasma membrane

protein amino acid phosphorylation

cytoplasmic vesicle

 
223803_s_at -0.584 6.483 -2.695 1.647e-02 0.262 -3.131 ZCCHC10 zinc finger, CCHC domain containing 10 5 -132360575 BC005211 5q31.1 Hs.29700 5

nucleic acid binding

zinc ion binding

metal ion binding

 
214705_at -0.999 4.385 -2.695 1.647e-02 0.262 -3.131 INADL InaD-like (Drosophila) 1 61980736 AJ001306 1p31.3 Hs.478125 24

protein binding

cellular_component

plasma membrane

tight junction

intracellular signaling cascade

apical plasma membrane

cell junction

Tight junction

203787_at -0.560 7.330 -2.695 1.648e-02 0.262 -3.132 SSBP2 single-stranded DNA binding protein 2 5 -80751427 NM_012446 5q14.1 Hs.102735 14

DNA binding

single-stranded DNA binding

protein binding

nucleus

cytoplasm

transcription regulator activity

regulation of transcription

 
210349_at 0.316 3.436 2.694 1.650e-02 0.262 -3.133 CAMK4 calcium/calmodulin-dependent protein kinase IV 5 110587980 L24959 5q21.3 Hs.591269 46

nucleotide binding

calmodulin-dependent protein kinase activity

calcium ion binding

calmodulin binding

ATP binding

nucleus

nucleolus

cytoplasm

protein amino acid phosphorylation

signal transduction

transferase activity

Calcium signaling pathway

Long-term potentiation

Neurotrophin signaling pathway

213793_s_at -0.790 8.633 -2.694 1.650e-02 0.262 -3.133 HOMER1 homer homolog 1 (Drosophila) 5 -78705541 BE550452 5q14.2 Hs.591761 33

skeletal muscle contraction

protein binding

membrane fraction

cytoplasm

plasma membrane

integral to plasma membrane

activation of phospholipase C activity by metabotropic glutamate receptor signaling pathway

synaptic transmission

postsynaptic density

Z disc

cell junction

positive regulation of calcium ion transport via store-operated calcium channel activity

costamere

synapse

postsynaptic membrane

skeletal muscle fiber development

 
234685_x_at 0.344 3.300 2.694 1.651e-02 0.262 -3.133 KRTAP4-9 keratin associated protein 4-9 17 36515166 AJ406941 17q21.2 Hs.307018 Hs.711926 1

keratin filament

 
209138_x_at 0.750 4.901 2.694 1.651e-02 0.263 -3.134 IGL@ immunoglobulin lambda locus 22   M87790 22q11.1-q11.2 Hs.449585 Hs.561078 20    
227430_at -0.300 5.288 -2.693 1.653e-02 0.263 -3.135 ZC3H10 zinc finger CCCH-type containing 10 12 54798296 AI969773 12q13.2 Hs.632706 7

nucleic acid binding

zinc ion binding

metal ion binding

 
240479_at 0.411 5.098 2.693 1.654e-02 0.263 -3.135 HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 6 -114483442 AW449310 6q21 Hs.645477 8

protein binding

Golgi apparatus

protein amino acid sulfation

sulfotransferase activity

[heparan sulfate]-glucosamine 3-sulfotransferase 1 activity

heparan sulfate proteoglycan biosynthetic process, enzymatic modification

membrane

integral to membrane

transferase activity

regulation of virion penetration into host cell

3'-phosphoadenosine 5'-phosphosulfate binding

negative regulation of coagulation

Heparan sulfate biosynthesis

214183_s_at 0.772 4.083 2.693 1.654e-02 0.263 -3.135 TKTL1 transketolase-like 1 X 153177220, 153186602 X91817 Xq28 Hs.102866 21

transketolase activity

calcium ion binding

nucleus

cytoplasm

glucose catabolic process

thiamin metabolic process

metabolic process

transferase activity

Pentose phosphate pathway

Carbon fixation in photosynthetic organisms

Biosynthesis of phenylpropanoids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of plant hormones

Metabolic pathways

217367_s_at -0.317 5.554 -2.693 1.654e-02 0.263 -3.135 ZHX3 zinc fingers and homeoboxes 3 20 -39240502 AB007855 20q12 Hs.380133 13

transcription factor activity

protein binding

intracellular

nucleus

cytoplasm

zinc ion binding

sequence-specific DNA binding

negative regulation of transcription, DNA-dependent

metal ion binding

 
208800_at -0.481 6.344 -2.693 1.654e-02 0.263 -3.135 SRP72 signal recognition particle 72kDa 4 57028518 AV702627 4q11 Hs.237825 18

signal recognition particle binding

binding

cytoplasm

signal recognition particle, endoplasmic reticulum targeting

SRP-dependent cotranslational protein targeting to membrane

7S RNA binding

response to drug

Protein export

209955_s_at -0.517 5.768 -2.692 1.656e-02 0.263 -3.136 FAP fibroblast activation protein, alpha 2 -162735445 U76833 2q23 Hs.654370 34

metalloendopeptidase activity

serine-type endopeptidase activity

plasma membrane

proteolysis

peptidase activity

dipeptidyl-peptidase activity

integral to membrane

lamellipodium

protein homodimerization activity

 
242979_at 0.769 5.326 2.692 1.658e-02 0.263 -3.137 IRS1 insulin receptor substrate 1 2 -227304276 AI474666 2q36 Hs.471508 290

positive regulation of mesenchymal cell proliferation

signal transducer activity

transmembrane receptor protein tyrosine kinase docking protein activity

protein kinase C binding

insulin receptor binding

insulin-like growth factor receptor binding

protein binding

nucleus

cytoplasm

microsome

plasma membrane

insulin receptor complex

caveola

signal transduction

positive regulation of glucose metabolic process

phosphoinositide 3-kinase cascade

positive regulation of cell migration

mammary gland development

positive regulation of fatty acid beta-oxidation

SH2 domain binding

glucose homeostasis

response to peptide hormone stimulus

protein kinase B signaling cascade

phosphoinositide 3-kinase binding

phosphoinositide 3-kinase binding

positive regulation of phosphoinositide 3-kinase activity

positive regulation of glycogen biosynthetic process

positive regulation of glycogen biosynthetic process

positive regulation of glucose import

negative regulation of insulin receptor signaling pathway

positive regulation of insulin receptor signaling pathway

insulin-like growth factor receptor signaling pathway

Neurotrophin signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

Type II diabetes mellitus

1558688_at 0.367 8.913 2.691 1.659e-02 0.263 -3.138 LOC441461 hypothetical LOC441461 9   BG701300 9q31.1 Hs.163155 1    
218772_x_at -0.847 8.424 -2.691 1.660e-02 0.263 -3.138 TMEM38B transmembrane protein 38B 9 107496645 NM_018112 9q31.2 Hs.411925 5

potassium channel activity

endoplasmic reticulum

ion transport

potassium ion transport

membrane

integral to membrane

potassium ion binding

nuclear membrane

sarcoplasmic reticulum membrane

 
1554127_s_at -0.689 8.134 -2.691 1.660e-02 0.263 -3.138 MSRB3 methionine sulfoxide reductase B3 12 63958754 BC040053 12q14.3 Hs.339024 6

mitochondrion

endoplasmic reticulum

peptide-methionine-(S)-S-oxide reductase activity

zinc ion binding

oxidoreductase activity

metal ion binding

oxidation reduction

 
203556_at -0.472 7.461 -2.690 1.663e-02 0.263 -3.140 ZHX2 zinc fingers and homeoboxes 2 8 123863081 NM_014943 8q24.13 Hs.658443 Hs.719079 12

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

protein binding

intracellular

nucleus

mRNA catabolic process

zinc ion binding

sequence-specific DNA binding

metal ion binding

 
203911_at 0.259 7.006 2.690 1.665e-02 0.263 -3.141 RAP1GAP RAP1 GTPase activating protein 1 -21795295, -21795295 NM_002885 1p36.1-p35 Hs.148178 40

GTPase activator activity

intracellular

Golgi apparatus

signal transduction

membrane

regulation of small GTPase mediated signal transduction

 
209568_s_at 0.514 6.717 2.689 1.666e-02 0.263 -3.142 RGL1 ral guanine nucleotide dissociation stimulator-like 1 1 181871830 AF186779 1q25.3 Hs.497148 6

guanyl-nucleotide exchange factor activity

protein binding

cellular_component

intracellular

signal transduction

Ral guanyl-nucleotide exchange factor activity

regulation of small GTPase mediated signal transduction

 
1554894_a_at 0.340 7.366 2.689 1.666e-02 0.263 -3.142 PCBD2 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 5 134268708 AF499009 5q31.1 Hs.710014 11

phenylalanine 4-monooxygenase activity

protein binding

cellular_component

nucleus

tetrahydrobiopterin biosynthetic process

4-alpha-hydroxytetrahydrobiopterin dehydratase activity

lyase activity

positive regulation of transcription, DNA-dependent

protein homotetramerization

protein heterooligomerization

 
221547_at -0.441 7.682 -2.689 1.666e-02 0.263 -3.142 PRPF18 PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae) 10 13668944 BC000794 10p13 Hs.161181 6

nucleus

spliceosomal complex

mRNA processing

RNA splicing

nuclear speck

 
241280_at 0.291 4.639 2.689 1.668e-02 0.264 -3.143 ALDOB aldolase B, fructose-bisphosphate 9 -103222662 AV650426 9q21.3-q22.2 Hs.530274 40

fructose-bisphosphate aldolase activity

microtubule organizing center

glycolysis

NADH oxidation

cytoskeletal protein binding

metabolic process

lyase activity

fructose 1,6-bisphosphate metabolic process

positive regulation of ATPase activity

centriolar satellite

identical protein binding

ATPase binding

fructose binding

vacuolar proton-transporting V-type ATPase complex assembly

Glycolysis / Gluconeogenesis

Pentose phosphate pathway

Fructose and mannose metabolism

Carbon fixation in photosynthetic organisms

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

226653_at -0.437 4.608 -2.688 1.669e-02 0.264 -3.143 MARK1 MAP/microtubule affinity-regulating kinase 1 1 218768190 AB040910 1q41 Hs.497806 27

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

ATP binding

cytoplasm

protein amino acid phosphorylation

cytoskeleton organization

protein kinase cascade

microtubule cytoskeleton

transferase activity

 
226673_at 0.464 5.653 2.688 1.670e-02 0.264 -3.143 SH2D3C SH2 domain containing 3C 9 -129540416, -129540416, -129540416, -129540416, -129540416, -129540416 AW665063 9q34.11 Hs.306412 16

SH3/SH2 adaptor activity

guanyl-nucleotide exchange factor activity

protein binding

intracellular

cytoplasm

JNK cascade

small GTPase mediated signal transduction

membrane

 
225215_s_at -0.394 8.333 -2.688 1.670e-02 0.264 -3.144 MTRF1L mitochondrial translational release factor 1-like 6 -153350092 BF665339 6q25-q26 Hs.225836 Hs.304818 9

cytoplasm

mitochondrion

translational termination

translation release factor activity, codon specific

 
210149_s_at 0.315 11.939 2.688 1.671e-02 0.264 -3.144 ATP5H ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d 17 -70546549 AF061735 17q25 Hs.514465 13

mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)

mitochondrion

ion transport

hydrogen ion transmembrane transporter activity

ATP synthesis coupled proton transport

proton transport

membrane

ATPase activity

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

1559507_at 0.318 3.567 2.688 1.672e-02 0.264 -3.145 LOC100130357 similar to hCG2038897 6   AK091836 6p24.1 Hs.657498 1    
228408_s_at -0.539 7.590 -2.687 1.673e-02 0.264 -3.145 SDAD1 SDA1 domain containing 1 4 -77090091 AI738666 4q21.1 Hs.632604 9

protein binding

nucleus

nucleolus

protein transport

ribosome biogenesis

 
231837_at -0.668 7.163 -2.687 1.673e-02 0.264 -3.145 USP28 ubiquitin specific peptidase 28 11 -113173806 AB040948 11q23 Hs.503891 9

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
219623_at -0.260 6.189 -2.687 1.674e-02 0.264 -3.146 ACTR5 ARP5 actin-related protein 5 homolog (yeast) 20 36810510 NM_024855 20q11.23 Hs.371585 7

protein binding

ATP binding

regulation of transcription

 
212482_at -0.693 8.151 -2.687 1.675e-02 0.264 -3.146 RMND5A required for meiotic nuclear division 5 homolog A (S. cerevisiae) 2 86800924 BF671894 2p11.2 Hs.75277 7    
219067_s_at -0.308 6.848 -2.687 1.675e-02 0.264 -3.147 NSMCE4A non-SMC element 4 homolog A (S. cerevisiae) 10 -123706592 NM_017615 10q26.13 Hs.258798 8    
225106_s_at -0.531 7.059 -2.686 1.676e-02 0.264 -3.147 OGFOD1 2-oxoglutarate and iron-dependent oxygenase domain containing 1 16 55042924 AK022130 16q12.2 Hs.231883 4

iron ion binding

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors

L-ascorbic acid binding

metal ion binding

oxidation reduction

 
237247_at 0.400 2.893 2.686 1.679e-02 0.264 -3.148 USP51 ubiquitin specific peptidase 51 X -55529686 AI341140 Xp11.21 Hs.134289 9

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

zinc ion binding

metal ion binding

 
228438_at 0.728 3.703 2.685 1.681e-02 0.264 -3.150 LOC100132891 hypothetical protein LOC100132891 8   AI948599 8q13.3 Hs.137674      
244103_at -0.385 8.033 -2.684 1.685e-02 0.265 -3.152 C1orf55 chromosome 1 open reading frame 55 1 -224237025 AW963092 1q42.12 Hs.520192 2    
1552757_s_at 0.341 3.331 2.684 1.685e-02 0.265 -3.152 C9orf66 chromosome 9 open reading frame 66 9 -203107 AI478419 9p24.3 Hs.190877 3    
209398_at -0.651 8.565 -2.684 1.685e-02 0.265 -3.152 HIST1H1C histone cluster 1, H1c 6 -26163946 BC002649 6p21.3 Hs.7644 17

nucleosome

DNA binding

protein binding

nucleus

chromosome

nucleosome assembly

nucleosome positioning

 
205849_s_at 0.248 12.106 2.683 1.686e-02 0.265 -3.152 UQCRB ubiquinol-cytochrome c reductase binding protein 8 -97308479 NM_006294 8q22 Hs.131255 10

mitochondrion

mitochondrial respiratory chain

oxidative phosphorylation

mitochondrial electron transport, ubiquinol to cytochrome c

transport

ubiquinol-cytochrome-c reductase activity

aerobic respiration

membrane

electron transport chain

Oxidative phosphorylation

Metabolic pathways

Cardiac muscle contraction

Alzheimer's disease

Parkinson's disease

Huntington's disease

214081_at -0.629 5.945 -2.683 1.687e-02 0.265 -3.153 PLXDC1 plexin domain containing 1 17 -34473082 AF070526 17q21.1 Hs.125036 11

angiogenesis

molecular_function

extracellular region

cytoplasm

membrane

integral to membrane

 
220035_at 0.420 4.987 2.683 1.687e-02 0.265 -3.153 NUP210 nucleoporin 210kDa 3 -13332736 NM_024923 3p25.1 Hs.475525 24

protein binding

nucleus

nuclear pore

endoplasmic reticulum

protein transport

membrane

integral to membrane

mRNA transport

intracellular protein transmembrane transport

 
203756_at 0.309 6.736 2.683 1.687e-02 0.265 -3.153 ARHGEF17 Rho guanine nucleotide exchange factor (GEF) 17 11 72697310 NM_014786 11q13.4 Hs.533719 Hs.719521 8

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

intracellular

actin cytoskeleton organization

regulation of Rho protein signal transduction

 
229052_at -0.481 11.505 -2.683 1.688e-02 0.265 -3.153 ANKRD23 ankyrin repeat domain 23 2 -96867377 AI637712 2q11.2 Hs.643430 8

nucleus

 
218552_at 0.443 8.683 2.683 1.689e-02 0.265 -3.154 ECHDC2 enoyl Coenzyme A hydratase domain containing 2 1 -53134491 NM_018281 1p32.3 Hs.476319 2

mitochondrion

lipid metabolic process

fatty acid metabolic process

metabolic process

lyase activity

 
212311_at 0.404 4.444 2.683 1.689e-02 0.265 -3.154 KIAA0746 KIAA0746 protein 4 -25358146 AA522514 4p15.2 Hs.479384 5

binding

membrane

integral to membrane

 
207364_at 0.367 5.050 2.682 1.689e-02 0.265 -3.154 TEX28 testis expressed 28 X -153152125 NM_001586 Xq28 Hs.672606 7

molecular_function

biological_process

membrane

integral to membrane

 
208583_x_at -0.253 6.372 -2.682 1.690e-02 0.265 -3.154 HIST1H2AJ histone cluster 1, H2aj 6 -27890058 NM_021066 6p22-p21.3 Hs.406691 10  

Systemic lupus erythematosus

226895_at -0.489 10.055 -2.682 1.691e-02 0.265 -3.155 NFIC nuclear factor I/C (CCAAT-binding transcription factor) 19 3310615, 3317572 AW134798 19p13.3 Hs.170131 23

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

intracellular

nucleus

DNA replication

regulation of transcription, DNA-dependent

positive regulation of transcription from RNA polymerase II promoter

 
213564_x_at 0.969 11.752 2.681 1.694e-02 0.265 -3.156 LDHB lactate dehydrogenase B 12 -21679542 BE042354 12p12.2-p12.1 Hs.446149 27

L-lactate dehydrogenase activity

binding

cytoplasm

oxidoreductase activity

anaerobic glycolysis

cellular carbohydrate metabolic process

oxidation reduction

Glycolysis / Gluconeogenesis

Cysteine and methionine metabolism

Pyruvate metabolism

Propanoate metabolism

Metabolic pathways

223310_x_at -0.387 8.806 -2.681 1.695e-02 0.265 -3.157 PNPLA8 patatin-like phospholipase domain containing 8 7 -107899306 AF217519 7q31 Hs.617340 13

lysophospholipase activity

binding

ATP binding

intracellular

intracellular

membrane fraction

membrane fraction

cytoplasm

peroxisomal membrane

peroxisomal membrane

endoplasmic reticulum

Golgi apparatus

fatty acid metabolic process

fatty acid metabolic process

metabolic process

membrane

integral to membrane

lipid catabolic process

hydrolase activity

calcium-independent phospholipase A2 activity

calcium-independent phospholipase A2 activity

perinuclear region of cytoplasm

 
222731_at -0.612 8.411 -2.681 1.696e-02 0.265 -3.157 ZDHHC2 zinc finger, DHHC-type containing 2 8 17058206 AK001608 8p21.3-p22 Hs.443852 8

zinc ion binding

membrane

integral to membrane

palmitoyltransferase activity

transferase activity

protein palmitoylation

metal ion binding

 
225414_at -0.369 7.334 -2.680 1.696e-02 0.265 -3.158 RNF149 ring finger protein 149 2 -101258984 AL558987 2q11.2 Hs.142074 8

protein binding

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
224905_at -0.447 6.667 -2.680 1.698e-02 0.266 -3.159 WDR26 WD repeat domain 26 1 -222639467 AA482548 1q42.11-q42.12 Hs.497873 8

cytoplasm

 
232004_at -0.451 6.054 -2.679 1.701e-02 0.266 -3.160 HNRNPR heterogeneous nuclear ribonucleoprotein R 1 -23508862 AK001846 1p36.12 Hs.373763 17

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

nucleoplasm

spliceosomal complex

RNA splicing

heterogeneous nuclear ribonucleoprotein complex

 
213575_at 0.487 5.007 2.679 1.702e-02 0.266 -3.161 TRA2A transformer 2 alpha homolog (Drosophila) 7 -23510925 AA831170 7p15.3 Hs.445652 11

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

nucleus

RNA splicing

identical protein binding

 
212236_x_at 0.304 6.113 2.678 1.703e-02 0.266 -3.161 KRT17 keratin 17 17 -37029217 Z19574 17q12-q21 Hs.2785 39

structural constituent of cytoskeleton

protein binding

nucleus

nucleolus

cytoplasm

cytoskeleton

intermediate filament

epidermis development

 
219088_s_at -0.315 5.828 -2.678 1.704e-02 0.266 -3.162 ZNF576 zinc finger protein 576 19 48792383, 48792577 AA639585 19q13.31 Hs.11110 5

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
212657_s_at 0.339 4.343 2.677 1.707e-02 0.266 -3.163 IL1RN interleukin 1 receptor antagonist 2 113591940, 113601608 U65590 2q14.2 Hs.81134 610

cytokine activity

interleukin-1 receptor antagonist activity

protein binding

extracellular region

extracellular space

intracellular

cytoplasm

inflammatory response

immune response

response to glucocorticoid stimulus

 
219415_at 0.277 3.980 2.677 1.707e-02 0.266 -3.163 TTYH1 tweety homolog 1 (Drosophila) 19 59618446 NM_020659 19q13.4 Hs.268728 4

ion channel activity

chloride channel activity

iron ion transmembrane transporter activity

protein binding

plasma membrane

ion transport

iron ion transport

cell adhesion

integral to membrane

chloride ion binding

chloride channel complex

 
205730_s_at 0.636 6.986 2.677 1.708e-02 0.266 -3.164 ABLIM3 actin binding LIM protein family, member 3 5 148501246 NM_014945 5q32 Hs.49688 15

actin binding

cytoplasm

cytoskeleton organization

zinc ion binding

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

Axon guidance

238207_at 0.288 5.556 2.677 1.709e-02 0.266 -3.164 LOC440957 similar to CG32736-PA 3 52545660 AW003138 3p21.1 Hs.660577 3

membrane

integral to membrane

 
213044_at -0.343 7.475 -2.677 1.709e-02 0.266 -3.165 ROCK1 Rho-associated, coiled-coil containing protein kinase 1 18 -16783700 N22548 18q11.1 Hs.306307 134

nucleotide binding

cytokinesis

protein serine/threonine kinase activity

ATP binding

intracellular

cytoplasm

Golgi apparatus

centriole

cytosol

protein amino acid phosphorylation

apoptosis

intracellular signaling cascade

Rho protein signal transduction

zinc ion binding

membrane

transferase activity

diacylglycerol binding

membrane to membrane docking

actin cytoskeleton organization

bleb formation

identical protein binding

negative regulation of neuron apoptosis

metal ion binding

leukocyte migration

leukocyte tethering or rolling

Chemokine signaling pathway

Vascular smooth muscle contraction

Wnt signaling pathway

TGF-beta signaling pathway

Axon guidance

Focal adhesion

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Pathogenic Escherichia coli infection - EHEC

218651_s_at 1.079 6.598 2.677 1.709e-02 0.266 -3.165 LARP6 La ribonucleoprotein domain family, member 6 15 -68930821, -68910942 NM_018357 15q23 Hs.416755 5

RNA binding

nucleus

cytoplasm

RNA processing

ribonucleoprotein complex

 
200611_s_at -0.484 7.686 -2.676 1.710e-02 0.266 -3.165 WDR1 WD repeat domain 1 4 -9685060 AB010427 4p16.1 Hs.128548 Hs.713658 15

actin binding

protein binding

cytoplasm

cytoskeleton

sensory perception of sound

 
226679_at 0.422 6.465 2.676 1.710e-02 0.266 -3.165 SLC26A11 solute carrier family 26, member 11 17 75808831 BE964598 17q25.3 Hs.4866 4

transporter activity

endoplasmic reticulum

Golgi apparatus

plasma membrane

ion transport

secondary active sulfate transmembrane transporter activity

sulfate transport

anion transmembrane transporter activity

anion exchanger activity

integral to membrane

 
225040_s_at -0.433 5.657 -2.676 1.710e-02 0.266 -3.165 RPE ribulose-5-phosphate-3-epimerase 2 210575596, 210575625 AV699857 2q32-q33.3 Hs.282260 11

ribulose-phosphate 3-epimerase activity

ribulose-phosphate 3-epimerase activity

protein binding

cytosol

carbohydrate metabolic process

metabolic process

isomerase activity

Pentose phosphate pathway

Pentose and glucuronate interconversions

Carbon fixation in photosynthetic organisms

Metabolic pathways

1558700_s_at 0.641 4.153 2.676 1.711e-02 0.266 -3.166 ZNF260 zinc finger protein 260 19 -41693433 BC042676 19q13.12 Hs.18103 5

DNA binding

intracellular

nucleus

multicellular organismal development

zinc ion binding

regulation of transcription

metal ion binding

 
200617_at 0.393 7.643 2.676 1.711e-02 0.266 -3.166 MLEC malectin 12 119609331 NM_014730 12q24.31 Hs.714322 4

endoplasmic reticulum

carbohydrate metabolic process

membrane

integral to membrane

carbohydrate binding

 
208972_s_at 0.389 11.130 2.676 1.712e-02 0.266 -3.166 ATP5G1 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9) 17 44325146 AL080089 17q21.32 Hs.80986 16

transporter activity

mitochondrion

mitochondrial proton-transporting ATP synthase complex

ion transport

lipid binding

hydrogen ion transmembrane transporter activity

ATP synthesis coupled proton transport

proton transport

membrane

integral to membrane

proton-transporting ATP synthase complex, coupling factor F(o)

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

215543_s_at -0.596 7.717 -2.676 1.712e-02 0.266 -3.166 LARGE like-glycosyltransferase 22 -31999061 AB011181 22q12.3 Hs.474667 18

Golgi apparatus

N-acetylglucosamine metabolic process

protein amino acid glycosylation

glycosphingolipid biosynthetic process

acetylglucosaminyltransferase activity

membrane

integral to membrane

transferase activity, transferring glycosyl groups

integral to Golgi membrane

muscle maintenance

 
200008_s_at -0.803 7.612 -2.676 1.713e-02 0.266 -3.166 GDI2 GDP dissociation inhibitor 2 10 -5847191 D13988 10p15 Hs.299055 16

Rab GDP-dissociation inhibitor activity

GTPase activator activity

cytoplasm

signal transduction

cell surface

protein transport

membrane

regulation of GTPase activity

 
226727_at 0.328 7.745 2.675 1.713e-02 0.266 -3.167 CISD3 CDGSH iron sulfur domain 3 17 34140035 BG171264 17q12 Hs.713595 4

iron ion binding

mitochondrion

metal ion binding

2 iron, 2 sulfur cluster binding

 
210817_s_at -0.583 9.150 -2.675 1.714e-02 0.266 -3.167 CALCOCO2 calcium binding and coiled-coil domain 2 17 44263370 BC004130 17q21.32 Hs.514920 11

protein binding

soluble fraction

nucleus

cytoplasm

Golgi apparatus

cytoskeleton

viral reproduction

response to interferon-gamma

protein homodimerization activity

perinuclear region of cytoplasm

 
202866_at -0.322 7.302 -2.675 1.715e-02 0.266 -3.168 DNAJB12 DnaJ (Hsp40) homolog, subfamily B, member 12 10 -73762593 BG283782 10q22.1 Hs.696014 7

endoplasmic reticulum

protein folding

membrane

integral to membrane

heat shock protein binding

unfolded protein binding

 
219718_at 0.627 7.890 2.675 1.715e-02 0.266 -3.168 FGGY FGGY carbohydrate kinase domain containing 1 59535212 NM_018291 1p32.1 Hs.444301 7

molecular_function

cellular_component

carbohydrate metabolic process

kinase activity

transferase activity

phosphotransferase activity, alcohol group as acceptor

neuron maintenance

 
225440_at -0.690 8.029 -2.675 1.716e-02 0.266 -3.168 AGPAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 21 44109543, 44169706 BE737251 21q22.3 Hs.248785 9

1-acylglycerol-3-phosphate O-acyltransferase activity

endoplasmic reticulum

cytosol

plasma membrane

metabolic process

acyltransferase activity

phospholipid biosynthetic process

integral to membrane

transferase activity

phospholipid:diacylglycerol acyltransferase activity

Glycerolipid metabolism

Glycerophospholipid metabolism

Ether lipid metabolism

Metabolic pathways

207895_at 0.327 4.418 2.674 1.719e-02 0.267 -3.170 NAALADL1 N-acetylated alpha-linked acidic dipeptidase-like 1 11 -64568870 NM_005468 11q12 Hs.13967 3

carboxypeptidase activity

plasma membrane

proteolysis

peptidase activity

metallopeptidase activity

zinc ion binding

integral to membrane

dipeptidase activity

metal ion binding

 
200941_at -0.446 7.861 -2.674 1.719e-02 0.267 -3.170 HSBP1 heat shock factor binding protein 1 16 82399093 AK026575 16q23.3 Hs.250899 Hs.705549 8

negative regulation of transcription from RNA polymerase II promoter

transcription corepressor activity

nucleus

 
213126_at -0.446 4.648 -2.674 1.720e-02 0.267 -3.170 MED8 mediator complex subunit 8 1 -43622983, -43622174 BG230758 1p34.2 Hs.301756 12

nucleus

regulation of transcription from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

modification-dependent protein catabolic process

regulation of transcription

 
1555704_at 0.345 3.831 2.674 1.720e-02 0.267 -3.170 CMTM3 CKLF-like MARVEL transmembrane domain containing 3 16 65195702, 65195713, 65196067 AY166714 16q21 Hs.298198 7

cytokine activity

extracellular space

chemotaxis

membrane

integral to membrane

 
207243_s_at -0.543 11.436 -2.673 1.722e-02 0.267 -3.171 CALM2 calmodulin 2 (phosphorylase kinase, delta) 2 -47240725 NM_001743 2p21 Hs.468442 52  

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Glioma

218821_at -0.432 7.060 -2.672 1.723e-02 0.267 -3.172 NPEPL1 aminopeptidase-like 1 20 56701267 AL139349 20q13.32 Hs.554211 Hs.654868 7

aminopeptidase activity

intracellular

proteolysis

peptidase activity

zinc ion binding

manganese ion binding

metal ion binding

 
206860_s_at -0.568 7.440 -2.672 1.724e-02 0.267 -3.172 MIOS missing oocyte, meiosis regulator, homolog (Drosophila) 7 7573140 NM_019005 7p22-p21 Hs.520215 4    
203849_s_at 0.297 4.367 2.672 1.725e-02 0.267 -3.173 KIF1A kinesin family member 1A 2 -241301856 BG473130 2q37.3 Hs.516802 21

nucleotide binding

microtubule motor activity

ATP binding

microtubule

microtubule-based movement

anterograde axon cargo transport

 
229927_at 0.338 3.880 2.671 1.728e-02 0.267 -3.174 LEMD1 LEM domain containing 1 1 -203617135 BE222220 1q32.1 Hs.655520 2

nuclear envelope

membrane

integral to membrane

 
243318_at -0.359 6.640 -2.671 1.728e-02 0.267 -3.174 DCAF8 DDB1 and CUL4 associated factor 8 1 -158475636, -158475636, -158452128, -158452128 AI208342 1q22-q23 Hs.632447 10

protein binding

 
226573_at 0.802 5.920 2.671 1.729e-02 0.267 -3.175 DIRAS1 DIRAS family, GTP-binding RAS-like 1 19 -2665564 AI829795 19p13.3 Hs.172753 6

nucleotide binding

GTP binding

intracellular

plasma membrane

small GTPase mediated signal transduction

 
227013_at -0.548 8.565 -2.671 1.729e-02 0.267 -3.175 LATS2 LATS, large tumor suppressor, homolog 2 (Drosophila) 13 -20445175 AI535735 13q11-q12 Hs.78960 17

G1/S transition of mitotic cell cycle

nucleotide binding

magnesium ion binding

spindle pole

protein serine/threonine kinase activity

ATP binding

nucleus

cytoplasm

centrosome

protein amino acid phosphorylation

cell cycle

mitosis

protein kinase cascade

hormone-mediated signaling

transferase activity

negative regulation of cyclin-dependent protein kinase activity

cell division

 
1562841_at 0.316 4.887 2.671 1.729e-02 0.267 -3.175 LOC339666 hypothetical protein LOC339666 22   BC041349 22q12.3 Hs.654761 1    
228162_at -0.422 5.573 -2.670 1.730e-02 0.267 -3.176 ESD esterase D/formylglutathione hydrolase 13 -46243391 AA193515 13q14.1-q14.2 Hs.432491 27

carboxylesterase activity

cytoplasm

biological_process

cytoplasmic membrane-bounded vesicle

S-formylglutathione hydrolase activity

 
1554020_at -0.512 3.793 -2.670 1.731e-02 0.267 -3.176 BICD1 bicaudal D homolog 1 (Drosophila) 12 32151451 BC010091 12p11.2-p11.1 Hs.505202 17

structural constituent of cytoskeleton

protein binding

Golgi apparatus

cytoskeleton

RNA processing

transport

intracellular mRNA localization

anatomical structure morphogenesis

 
221249_s_at 0.363 5.597 2.670 1.732e-02 0.267 -3.176 FAM117A family with sequence similarity 117, member A 17 -45142687 NM_030802 17q21.33 Hs.514308 2    
218579_s_at -0.336 4.886 -2.670 1.732e-02 0.267 -3.176 DHX35 DEAH (Asp-Glu-Ala-His) box polypeptide 35 20 37024413 NM_021931 20q11.22-q12 Hs.444520 5

nucleotide binding

nucleic acid binding

helicase activity

ATP binding

spliceosomal complex

mRNA processing

ATP-dependent helicase activity

RNA splicing

hydrolase activity

 
207771_at 0.253 5.648 2.670 1.732e-02 0.267 -3.177 SLC5A2 solute carrier family 5 (sodium/glucose cotransporter), member 2 16 31401939 NM_003041 16p12-p11 Hs.709195 9

transporter activity

low-affinity glucose:sodium symporter activity

carbohydrate metabolic process

ion transport

sodium ion transport

carbohydrate transport

symporter activity

glucose transport

membrane

integral to membrane

sodium ion binding

brush border membrane

 
232662_x_at 0.403 7.435 2.670 1.733e-02 0.267 -3.177 C10orf58 chromosome 10 open reading frame 58 10 82158221, 82163570 AK022598 10q23.1 Hs.500333 Hs.718589 10

extracellular region

 
236657_at -0.684 5.994 -2.670 1.734e-02 0.267 -3.177 LOC100130506 hypothetical protein LOC100130506 2   AW014647          
244682_at 0.274 2.545 2.670 1.734e-02 0.267 -3.177 CAMSAP1 calmodulin regulated spectrin-associated protein 1 9 -137840153 H11471 9q34.3 Hs.522493 2    
214869_x_at -0.282 6.059 -2.669 1.735e-02 0.267 -3.178 GAPVD1 GTPase activating protein and VPS9 domains 1 9 127063931 AK021533 9q33.3 Hs.495134 9

guanyl-nucleotide exchange factor activity

GTPase activator activity

intracellular

endosome

cytosol

endocytosis

signal transduction

membrane

GTPase activating protein binding

regulation of small GTPase mediated signal transduction

regulation of protein transport

 
241793_at -1.360 9.582 -2.669 1.736e-02 0.267 -3.178 ZMYND17 zinc finger, MYND-type containing 17 10 -74853342 BE674227 10q22.2 Hs.631823 2

zinc ion binding

metal ion binding

 
1554256_a_at 0.446 3.950 2.669 1.736e-02 0.267 -3.179 PCNXL2 pecanex-like 2 (Drosophila) 1 -231186504 BC008300 1q42.2 Hs.370605 4

membrane

integral to membrane

 
233480_at -0.408 3.492 -2.669 1.737e-02 0.267 -3.179 TMEM43 transmembrane protein 43 3 14141440 AK026869 3p25.1 Hs.517817 18

nucleus

endoplasmic reticulum

Golgi apparatus

membrane

integral to membrane

 
228459_at 0.254 3.103 2.668 1.737e-02 0.267 -3.179 FAM84A family with sequence similarity 84, member A 2 14690306 BF063776 2p24.3 Hs.260855 6    
1567297_at 0.272 4.625 2.668 1.737e-02 0.267 -3.179 OR13C4 olfactory receptor, family 13, subfamily C, member 4 9 -106328354 X64991 9q31.1 Hs.553601 5

receptor activity

olfactory receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

sensory perception of smell

integral to membrane

response to stimulus

Olfactory transduction

201514_s_at -0.740 6.900 -2.668 1.738e-02 0.267 -3.180 G3BP1 GTPase activating protein (SH3 domain) binding protein 1 5 151131668 NM_005754 5q33.1 Hs.587054 27

nucleotide binding

DNA binding

RNA binding

ATP-dependent DNA helicase activity

ATP-dependent RNA helicase activity

helicase activity

endonuclease activity

protein binding

ATP binding

intracellular

nucleus

cytoplasm

cytosol

plasma membrane

transport

Ras protein signal transduction

hydrolase activity

 
1564251_at 0.321 5.359 2.668 1.739e-02 0.267 -3.180 EMID1 EMI domain containing 1 22 27931952 AL831910 22q12.2 Hs.289106 5

protein binding

extracellular region

proteinaceous extracellular matrix

endoplasmic reticulum

Golgi apparatus

 
217729_s_at -0.431 8.376 -2.668 1.739e-02 0.267 -3.180 AES amino-terminal enhancer of split 19 -3003907, -3003907 NM_001130 19p13.3 Hs.515053 24

skeletal system development

transcription corepressor activity

protein binding

nucleus

regulation of transcription from RNA polymerase II promoter

multicellular organismal development

organ morphogenesis

negative regulation of specific transcription from RNA polymerase II promoter

Wnt receptor signaling pathway

negative regulation of transcription

transcription regulator activity

cellular response to extracellular stimulus

negative regulation of protein binding

regulation of growth

negative regulation of response to cytokine stimulus

response to interleukin-1

 
226660_at -0.521 8.434 -2.668 1.740e-02 0.267 -3.180 RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 17 55325224 AI142096 17q23.1 Hs.463642 123

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

cytosol

protein amino acid phosphorylation

signal transduction

transferase activity

synaptosome

cell junction

synapse

ErbB signaling pathway

mTOR signaling pathway

TGF-beta signaling pathway

Fc gamma R-mediated phagocytosis

Insulin signaling pathway

Acute myeloid leukemia

211549_s_at -0.335 3.008 -2.668 1.740e-02 0.267 -3.180 HPGD hydroxyprostaglandin dehydrogenase 15-(NAD) 4 -175647902, -175647902 U63296 4q34-q35 Hs.596913 47

prostaglandin E receptor activity

binding

nucleus

nucleolus

cytoplasm

cytosol

lipid metabolic process

fatty acid metabolic process

prostaglandin metabolic process

transforming growth factor beta receptor signaling pathway

female pregnancy

parturition

15-hydroxyprostaglandin dehydrogenase (NAD+) activity

oxidoreductase activity

lipoxygenase pathway

protein homodimerization activity

negative regulation of cell cycle

NAD or NADH binding

oxidation reduction

 
212665_at -0.398 7.184 -2.668 1.740e-02 0.267 -3.180 TIPARP TCDD-inducible poly(ADP-ribose) polymerase 3 157875072 AL556438 3q25.31 Hs.719169 11

vasculogenesis

kidney development

nucleic acid binding

NAD+ ADP-ribosyltransferase activity

protein binding

nucleus

protein amino acid ADP-ribosylation

nitrogen compound metabolic process

zinc ion binding

post-embryonic development

transferase activity, transferring glycosyl groups

hemopoiesis

multicellular organismal metabolic process

metal ion binding

platelet-derived growth factor receptor signaling pathway

skeletal system morphogenesis

smooth muscle tissue development

palate development

face morphogenesis

 
226168_at -0.323 6.754 -2.667 1.741e-02 0.267 -3.181 ZFAND2B zinc finger, AN1-type domain 2B 2 219779781 AA524690 2q35 Hs.534540 6

protein binding

zinc ion binding

metal ion binding

 
203961_at 0.437 4.351 2.667 1.741e-02 0.267 -3.181 NEBL nebulette 10 -21108910, -21108910 AL157398 10p12 Hs.5025 15

actin binding

structural constituent of muscle

regulation of actin filament length

 
202669_s_at 0.356 5.383 2.667 1.741e-02 0.267 -3.181 EFNB2 ephrin-B2 13 -105940096 U16797 13q33 Hs.149239 71

lymph vessel development

plasma membrane

integral to plasma membrane

cell-cell signaling

multicellular organismal development

nervous system development

organ morphogenesis

cell differentiation

interspecies interaction between organisms

ephrin receptor binding

Axon guidance

243452_at 0.467 3.711 2.667 1.742e-02 0.267 -3.181 LOC646778 hypothetical LOC646778 18   BE895304 18q12.1 Hs.631680 1    
222619_at -0.537 6.840 -2.667 1.742e-02 0.267 -3.181 ZNF281 zinc finger protein 281 1 -198642042 AU150752 1q32.1 Hs.59757 5

negative regulation of transcription from RNA polymerase II promoter

DNA binding

specific RNA polymerase II transcription factor activity

intracellular

nucleus

DNA-directed RNA polymerase II, core complex

zinc ion binding

regulation of transcription

metal ion binding

 
227357_at -0.462 7.546 -2.667 1.743e-02 0.267 -3.182 MAP3K7IP3 mitogen-activated protein kinase kinase kinase 7 interacting protein 3 X -30755479 BF593914 Xp21.2 Hs.188256 10

protein binding

intracellular

zinc ion binding

metal ion binding

 
202440_s_at -0.516 5.903 -2.667 1.743e-02 0.267 -3.182 ST5 suppression of tumorigenicity 5 11 -8671474, -8671474, -8671474 NM_005418 11p15 Hs.117715 11

protein binding

 
218076_s_at -0.413 7.620 -2.666 1.745e-02 0.267 -3.183 ARHGAP17 Rho GTPase activating protein 17 16 -24838212 NM_018054 16p12.1 Hs.373793 8

GTPase activator activity

protein binding

intracellular

cytoplasm

tight junction

signal transduction

membrane

SH3 domain binding

cell junction

 
223231_at -0.322 8.569 -2.666 1.745e-02 0.267 -3.183 TATDN1 TatD DNase domain containing 1 8 -125569915 AF212250 8q24.13 Hs.170568 3

nuclease activity

nucleus

hydrolase activity

endodeoxyribonuclease activity, producing 5'-phosphomonoesters

 
218241_at -0.400 7.242 -2.666 1.746e-02 0.267 -3.183 GOLGA5 golgi autoantigen, golgin subfamily a, 5 14 92330402 NM_005113 14q32.12-q32.13 Hs.104320 14

Golgi membrane

protein tyrosine kinase activity

protein binding

ATP binding

Golgi apparatus

cis-Golgi network

protein amino acid phosphorylation

Golgi organization

membrane

integral to membrane

Rab GTPase binding

Golgi cisterna

protein homodimerization activity

Golgi vesicle transport

 
226331_at -0.303 7.064 -2.666 1.746e-02 0.267 -3.184 BBX bobby sox homolog (Drosophila) 3 108724472 BF508813 3q13.1 Hs.124366 11

DNA binding

nucleus

regulation of transcription

 
220239_at -0.581 4.141 -2.666 1.746e-02 0.267 -3.184 KLHL7 kelch-like 7 (Drosophila) 7 23111877 NM_018846 7p15.3 Hs.654817 9

protein binding

nucleus

nucleolus

 
204647_at -0.817 8.045 -2.666 1.747e-02 0.267 -3.184 HOMER3 homer homolog 3 (Drosophila) 19 -18901009, -18901009, -18901009, -18901009, -18901009 NM_004838 19p13.11 Hs.10326 16

protein binding

cytoplasm

plasma membrane

protein targeting

metabotropic glutamate receptor signaling pathway

postsynaptic density

cell junction

synapse

postsynaptic membrane

 
204324_s_at -0.768 5.851 -2.666 1.747e-02 0.267 -3.184 GOLIM4 golgi integral membrane protein 4 3 -169210347 NM_014498 3q26.2 Hs.143600 10

nucleus

endosome

Golgi apparatus

Golgi lumen

cis-Golgi network

transport

membrane

integral to membrane

endocytic vesicle

 
229530_at 0.378 5.619 2.664 1.753e-02 0.268 -3.187 GUCY1A3 guanylate cyclase 1, soluble, alpha 3 4 156807311, 156807311, 156807311, 156807598, 156807598, 156808264 BF002625 4q31.1-q31.2 4q31.3-q33 Hs.24258 14

nucleotide binding

guanylate cyclase activity

receptor activity

GTP binding

cytoplasm

nitric oxide mediated signal transduction

guanylate cyclase complex, soluble

regulation of blood pressure

positive regulation of cGMP biosynthetic process

response to defense-related host nitric oxide production

relaxation of vascular smooth muscle

Purine metabolism

Vascular smooth muscle contraction

Gap junction

Long-term depression

223925_s_at -0.455 4.636 -2.664 1.754e-02 0.268 -3.188 LUZP6 leucine zipper protein 6 7 -135262042 AF130088 7q33 Hs.654894 2    
202137_s_at -0.741 6.285 -2.663 1.755e-02 0.268 -3.188 ZMYND11 zinc finger, MYND domain containing 11 10 170423, 170423 NM_006624 10p14 Hs.292265 17

negative regulation of transcription from RNA polymerase II promoter

DNA binding

protein binding

nucleus

cell cycle

zinc ion binding

cell proliferation

regulation of transcription

metal ion binding

 
210301_at 0.357 4.405 2.663 1.755e-02 0.268 -3.188 XDH xanthine dehydrogenase 2 -31410691 U06117 2p23.1 Hs.250 48

xanthine dehydrogenase activity

xanthine oxidase activity

xanthine oxidase activity

iron ion binding

peroxisome

cytosol

cytosol

lactation

electron carrier activity

response to aluminum ion

oxidoreductase activity

molybdenum ion binding

regulation of epithelial cell differentiation

bone resorption

metal ion binding

FAD binding

2 iron, 2 sulfur cluster binding

oxidation reduction

Purine metabolism

Caffeine metabolism

Drug metabolism - other enzymes

Metabolic pathways

211489_at 0.342 2.974 2.662 1.760e-02 0.269 -3.191 ADRA1A adrenergic, alpha-1A-, receptor 8 -26683138, -26679287, -26669829, -26661583 D32201 8p21-p11.2 Hs.709175 67

receptor activity

G-protein coupled receptor activity

adrenoceptor activity

alpha1-adrenergic receptor activity

alpha1-adrenergic receptor activity

plasma membrane

integral to plasma membrane

apoptosis

smooth muscle contraction

signal transduction

G-protein coupled receptor protein signaling pathway

protein kinase cascade

cell-cell signaling

negative regulation of cell proliferation

Calcium signaling pathway

Neuroactive ligand-receptor interaction

Vascular smooth muscle contraction

220199_s_at -0.610 5.831 -2.661 1.762e-02 0.269 -3.192 AIDA axin interactor, dorsalization associated 1 -220907977 NM_022831 1q41 Hs.156625 Hs.534965 Hs.707666 6

protein binding

cellular_component

multicellular organismal development

dorsal/ventral pattern formation

regulation of protein homodimerization activity

negative regulation of JNK cascade

 
200736_s_at -0.274 9.668 -2.661 1.762e-02 0.269 -3.192 GPX1 glutathione peroxidase 1 3 -49369612 NM_000581 3p21.3 Hs.76686 126

temperature homeostasis

release of cytochrome c from mitochondria

endothelial cell development

negative regulation of inflammatory response to antigenic stimulus

glutathione peroxidase activity

glutathione peroxidase activity

cytoplasm

mitochondrion

cytosol

lipid metabolic process

triglyceride metabolic process

glutathione metabolic process

anti-apoptosis

induction of apoptosis

sensory perception of sound

selenium binding

proteasome inhibitor activity

induction of apoptosis by oxidative stress

response to xenobiotic stimulus

response to symbiotic bacterium

response to wounding

response to toxin

UV protection

response to selenium ion

response to gamma radiation

myotube differentiation

oxidoreductase activity

SH3 domain binding

protein amino acid oxidation

response to hydroperoxide

regulation of mammary gland epithelial cell proliferation

regulation of gene expression, epigenetic

vasodilation

response to hydrogen peroxide

hydrogen peroxide catabolic process

negative regulation of caspase activity

glutathione binding

skeletal muscle regeneration

regulation of neuron apoptosis

blood vessel endothelial cell migration

fat cell differentiation

myoblast proliferation

interaction with symbiont

positive regulation of protein kinase B signaling cascade

oxidation reduction

heart contraction

angiogenesis involved in wound healing

Glutathione metabolism

Arachidonic acid metabolism

Amyotrophic lateral sclerosis (ALS)

Huntington's disease

219251_s_at -0.319 7.125 -2.661 1.762e-02 0.269 -3.192 WDR60 WD repeat domain 60 7 158342029 NM_018051 7q36.3 Hs.389945 7    
209772_s_at 0.321 3.933 2.661 1.762e-02 0.269 -3.192 CD24 CD24 molecule 6 -19611913 X69397 6q21 Hs.644105 Hs.694721 65

response to hypoxia

cell activation

regulation of cytokine-mediated signaling pathway

response to molecule of bacterial origin

pre-B cell differentiation

leukocyte migration during inflammatory response

immune response-regulating cell surface receptor signaling pathway

positive regulation of T cell mediated immune response to tumor cell

positive regulation of inflammatory response to antigenic stimulus

positive regulation of B cell apoptosis

signal transducer activity

protein binding

membrane fraction

plasma membrane

oxygen and reactive oxygen species metabolic process

heterophilic cell adhesion

leukocyte adhesion

elevation of cytosolic calcium ion concentration

neuromuscular synaptic transmission

negative regulation of neuroblast proliferation

induction of apoptosis by extracellular signals

induction of apoptosis by intracellular signals

apoptotic mitochondrial changes

external side of plasma membrane

Wnt receptor signaling pathway

cell migration

protein kinase binding

carbohydrate binding

apoptotic nuclear changes

protein tyrosine kinase activator activity

regulation of epithelial cell differentiation

negative regulation of B cell proliferation

neuron projection development

anchored to membrane

T cell costimulation

anchored to external side of plasma membrane

microvillus membrane

B cell receptor transport into membrane raft

chemokine receptor transport out of membrane raft

negative regulation of transforming growth factor-beta3 production

positive regulation of integrin activation

positive regulation of cell-cell adhesion mediated by integrin

negative regulation of erythrocyte clearance

homotypic cell-cell adhesion

negative regulation of erythrocyte aggregation

positive regulation of T cell homeostatic proliferation

positive regulation of activated T cell proliferation

regulation of phosphorylation

cholesterol homeostasis

positive regulation of MAP kinase activity

regulation of MAPKKK cascade

eukaryotic cell surface binding

response to estrogen stimulus

membrane raft

regulation of B cell differentiation

negative regulation of neuron differentiation

respiratory burst

negative regulation of T cell homeostatic proliferation

positive regulation of alpha-beta T cell proliferation

synaptic vesicle endocytosis

positive regulation of peptidyl-tyrosine phosphorylation

positive regulation of calcium-mediated signaling

cilium membrane

 
1563071_at 0.281 5.029 2.661 1.763e-02 0.269 -3.192 LOC100289061 hypothetical protein LOC100289061 1   BC038543 1q21.3 Hs.677561 1    
207564_x_at -0.606 6.670 -2.661 1.763e-02 0.269 -3.192 OGT O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) X 70669657 NM_003605 Xq13 Hs.405410 47

protein binding

nucleus

cytoplasm

cytosol

protein amino acid O-linked glycosylation

signal transduction

response to nutrient

acetylglucosaminyltransferase activity

transferase activity, transferring glycosyl groups

MLL5-L complex

O-Glycan biosynthesis

Metabolic pathways

201539_s_at -1.037 11.817 -2.661 1.765e-02 0.269 -3.193 FHL1 four and a half LIM domains 1 X 135056526, 135057224, 135058402, 135079120, 135079731, 135106578, 135106720 U29538 Xq26 Hs.435369 38

molecular_function

cellular_component

nucleus

cytoplasm

cytosol

multicellular organismal development

muscle organ development

zinc ion binding

organ morphogenesis

cell growth

cell differentiation

metal ion binding

 
243829_at -0.442 4.988 -2.660 1.766e-02 0.269 -3.194 BRAF v-raf murine sarcoma viral oncogene homolog B1 7 -140080281 AW613053 7q34 Hs.550061 427

nucleotide binding

protein serine/threonine kinase activity

receptor signaling protein activity

protein binding

ATP binding

nucleus

cytoplasm

plasma membrane

protein amino acid phosphorylation

anti-apoptosis

small GTPase mediated signal transduction

zinc ion binding

organ morphogenesis

transferase activity

diacylglycerol binding

metal ion binding

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

mTOR signaling pathway

Vascular smooth muscle contraction

Focal adhesion

Natural killer cell mediated cytotoxicity

Long-term potentiation

Neurotrophin signaling pathway

Long-term depression

Regulation of actin cytoskeleton

Insulin signaling pathway

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Thyroid cancer

Melanoma

Bladder cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Non-small cell lung cancer

1558217_at 0.239 3.771 2.660 1.768e-02 0.269 -3.195 SLFN13 schlafen family member 13 17 -30786227 AK074465 17q12 Hs.462833 8

nucleotide binding

ATP binding

intracellular

 
225154_at -0.275 8.403 -2.659 1.769e-02 0.269 -3.196 SYAP1 synapse associated protein 1, SAP47 homolog (Drosophila) X 16647675 BG029566 Xp22.2 Hs.605178 11

nucleus

 
238889_at -0.340 2.954 -2.659 1.769e-02 0.269 -3.196 AGBL5 ATP/GTP binding protein-like 5 2 27127994, 27127994 AA045527 2p23.3 Hs.138207 4

metallocarboxypeptidase activity

nucleus

cytoplasm

proteolysis

zinc ion binding

 
213490_s_at -0.448 6.453 -2.659 1.770e-02 0.269 -3.196 MAP2K2 mitogen-activated protein kinase kinase 2 19 -4041319 AI762811 19p13.3 Hs.465627 98

nucleotide binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

extracellular region

protein amino acid phosphorylation

Ras protein signal transduction

transferase activity

MAPK signaling pathway

ErbB signaling pathway

Vascular smooth muscle contraction

VEGF signaling pathway

Gap junction

Toll-like receptor signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Long-term potentiation

Neurotrophin signaling pathway

Long-term depression

Regulation of actin cytoskeleton

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Prion diseases

Pathways in cancer

Renal cell carcinoma

Endometrial cancer

Glioma

Prostate cancer

Thyroid cancer

Melanoma

Bladder cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Non-small cell lung cancer

202869_at 0.530 5.510 2.659 1.771e-02 0.269 -3.196 OAS1 2',5'-oligoadenylate synthetase 1, 40/46kDa 12 111829121, 111829121 NM_016816 12q24.1 Hs.524760 44

nucleotide binding

RNA binding

ATP binding

nucleus

cytoplasm

mitochondrion

endoplasmic reticulum

microsome

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

immune response

transferase activity

nucleotidyltransferase activity

 
239831_at 0.380 4.036 2.659 1.772e-02 0.269 -3.197 TMEM106C transmembrane protein 106C 12 46643596 R19392 12q13.1 Hs.596726 5

molecular_function

cellular_component

endoplasmic reticulum

biological_process

membrane

integral to membrane

 
201667_at 0.566 7.602 2.658 1.774e-02 0.269 -3.198 GJA1 gap junction protein, alpha 1, 43kDa 6 121798443 NM_000165 6q21-q23.2 Hs.74471 181

signal transducer activity

protein binding

cytoplasm

mitochondrial outer membrane

lysosome

early endosome

multivesicular body

endoplasmic reticulum

Golgi apparatus

plasma membrane

plasma membrane

integral to plasma membrane

fascia adherens

connexon complex

apoptosis

muscle contraction

cell-cell signaling

heart development

negative regulation of cell proliferation

response to pH

vascular transport

ion transmembrane transporter activity

ATP transport

gap junction assembly

SH3 domain binding

transmembrane transporter activity

cell junction

PDZ domain binding

Golgi-associated vesicle membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

membrane raft

positive regulation of protein catabolic process

neuron projection morphogenesis

protein oligomerization

regulation of calcium ion transport

Gap junction

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

1557055_s_at -0.743 6.704 -2.658 1.774e-02 0.269 -3.198 LOC643837 hypothetical LOC643837 1 752926 BC042880 1p36.33 Hs.133183 2    
221903_s_at -0.911 6.645 -2.658 1.774e-02 0.269 -3.198 CYLD cylindromatosis (turban tumor syndrome) 16 49333461, 49333529 BE046443 16q12.1 Hs.578973 54

structural constituent of ribosome

ubiquitin thiolesterase activity

intracellular

cytoplasm

ribosome

cytoskeleton

translation

ubiquitin-dependent protein catabolic process

cell cycle

peptidase activity

cysteine-type peptidase activity

perinuclear region of cytoplasm

RIG-I-like receptor signaling pathway

228822_s_at -0.473 7.776 -2.658 1.775e-02 0.269 -3.198 USP16 ubiquitin specific peptidase 16 21 29318808 AI435036 21q22.11 Hs.99819 15

transcription coactivator activity

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

nucleus

cytoplasm

ubiquitin-dependent protein catabolic process

cell cycle

mitosis

peptidase activity

zinc ion binding

chromatin modification

histone deubiquitination

histone binding

ubiquitin binding

regulation of transcription

positive regulation of transcription, DNA-dependent

metal ion binding

protein homotetramerization

cell division

 
207142_at -0.926 2.907 -2.658 1.775e-02 0.269 -3.198 KCNJ3 potassium inwardly-rectifying channel, subfamily J, member 3 2 155263338 NM_002239 2q24.1 Hs.591606 24

voltage-gated ion channel activity

protein binding

ion transport

potassium ion transport

voltage-gated potassium channel complex

external side of plasma membrane

G-protein activated inward rectifier potassium channel activity

membrane

integral to membrane

T-tubule

potassium ion binding

 
214641_at -0.834 6.383 -2.658 1.776e-02 0.269 -3.199 COL4A3 collagen, type IV, alpha 3 (Goodpasture antigen) 2 227737524 M81379 2q36-q37 Hs.570065 77

integrin binding

integrin binding

extracellular matrix structural constituent

protein binding

extracellular region

collagen

collagen type IV

induction of apoptosis

activation of caspase activity

cell adhesion

cell surface receptor linked signal transduction

sensory perception of sound

blood circulation

metalloendopeptidase inhibitor activity

negative regulation of cell proliferation

negative regulation of angiogenesis

 
223413_s_at 0.368 7.112 2.657 1.777e-02 0.269 -3.200 LYAR Ly1 antibody reactive homolog (mouse) 4 -4320331, -4320331 AW958593 4p16.3 Hs.425427 14

protein binding

nucleus

nucleolus

zinc ion binding

metal ion binding

 
201585_s_at -0.304 7.075 -2.657 1.778e-02 0.269 -3.200 SFPQ splicing factor proline/glutamine-rich (polypyrimidine tract binding protein associated) 1 -35421789 BG035151 1p34.3 Hs.355934 47

nucleotide binding

DNA binding

RNA binding

protein binding

nucleus

DNA repair

DNA recombination

mRNA processing

response to DNA damage stimulus

RNA splicing

nuclear matrix

regulation of transcription

 
209781_s_at -0.582 7.736 -2.656 1.780e-02 0.269 -3.201 KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3 8 136538897 AF069681 8q24.2 Hs.444558 20

RNA binding

protein binding

nucleus

nucleolus

cytoplasm

spermatogenesis

SH3 domain binding

regulation of transcription

 
208445_s_at -0.318 7.390 -2.656 1.781e-02 0.269 -3.201 BAZ1B bromodomain adjacent to zinc finger domain, 1B 7 -72492675 NM_023005 7q11.23 Hs.719243 20

nucleotide binding

condensed chromosome

chromatin binding

transcription factor activity

non-membrane spanning protein tyrosine kinase activity

protein binding

ATP binding

nucleus

centromeric heterochromatin

chromatin assembly or disassembly

chromatin remodeling

response to DNA damage stimulus

zinc ion binding

kinase activity

histone phosphorylation

chromatin remodeling complex

transferase activity

histone kinase activity

regulation of transcription

metal ion binding

histone acetyl-lysine binding

 
1562239_at 0.375 4.648 2.656 1.781e-02 0.269 -3.201 SGSM1 small G protein signaling modulator 1 22 23532135 AB075821 22q11.23 Hs.474397 Hs.620906 5

Rab GTPase activator activity

intracellular

Golgi apparatus

regulation of Rab GTPase activity

 
205309_at 0.282 3.263 2.656 1.781e-02 0.269 -3.202 SMPDL3B sphingomyelin phosphodiesterase, acid-like 3B 1 28134090, 28134090 NM_014474 1p35.3 Hs.123659 3

sphingomyelin phosphodiesterase activity

extracellular region

extracellular space

sphingomyelin catabolic process

metabolic process

hydrolase activity, acting on glycosyl bonds

 
1566926_at 0.262 4.400 2.656 1.781e-02 0.269 -3.202 C21orf104 chromosome 21 open reading frame 104 21   AJ011409   Hs.548784      
202843_at -0.622 6.201 -2.655 1.785e-02 0.270 -3.203 DNAJB9 DnaJ (Hsp40) homolog, subfamily B, member 9 7 107997591 NM_012328 14q24.2-q24.3 7q31 Hs.6790 16

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

protein folding

heat shock protein binding

unfolded protein binding

 
200951_s_at 0.318 3.456 2.655 1.785e-02 0.270 -3.203 CCND2 cyclin D2 12 4253162 AW026491 12p13 Hs.376071 73

G1/S transition of mitotic cell cycle

cyclin-dependent protein kinase holoenzyme complex

positive regulation of protein amino acid phosphorylation

protein binding

nucleus

positive regulation of cell proliferation

protein kinase binding

positive regulation of cyclin-dependent protein kinase activity

cell division

regulation of cell cycle

Cell cycle

p53 signaling pathway

Wnt signaling pathway

Focal adhesion

Jak-STAT signaling pathway

201289_at -1.877 6.609 -2.655 1.785e-02 0.270 -3.204 CYR61 cysteine-rich, angiogenic inducer, 61 1 85819031 NM_001554 1p31-p22 Hs.8867 82

regulation of cell growth

patterning of blood vessels

insulin-like growth factor binding

extracellular region

chemotaxis

cell adhesion

heparin binding

cell proliferation

anatomical structure morphogenesis

positive regulation of cell-substrate adhesion

extracellular matrix organization

extracellular matrix binding

 
214363_s_at -0.365 8.944 -2.655 1.786e-02 0.270 -3.204 MATR3 matrin 3 5 138637690, 138657253 AA129420 5q31.2 Hs.268939 24

nucleotide binding

RNA binding

structural molecule activity

protein binding

intracellular

nucleus

nuclear inner membrane

zinc ion binding

nuclear matrix

metal ion binding

 
223271_s_at -0.424 5.914 -2.655 1.786e-02 0.270 -3.204 CTDSPL2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 15 42506870 AF161543 15q15.3-q21.1 Hs.497967 4

phosphoprotein phosphatase activity

hydrolase activity

 
1569856_at -0.397 3.032 -2.655 1.787e-02 0.270 -3.204 TPP2 tripeptidyl peptidase II 13 102047286 BC024905 13q32-q33 Hs.432424 23

aminopeptidase activity

serine-type endopeptidase activity

cytoplasm

proteolysis

peptidase activity

tripeptidyl-peptidase activity

 
201266_at -0.437 8.584 -2.654 1.787e-02 0.270 -3.205 TXNRD1 thioredoxin reductase 1 12 103133688, 103204856 NM_003330 12q23-q24.1 Hs.708065 60

thioredoxin-disulfide reductase activity

thioredoxin-disulfide reductase activity

nucleus

cytoplasm

cytosol

transport

signal transduction

selenium binding

electron carrier activity

protein disulfide oxidoreductase activity

oxidoreductase activity

electron transport chain

cell redox homeostasis

FAD binding

NADP or NADPH binding

Pyrimidine metabolism

200765_x_at -0.478 8.070 -2.654 1.788e-02 0.270 -3.205 CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 5 138117005 NM_001903 5q31 Hs.534797 Hs.656653 70

structural molecule activity

protein binding

cytoplasm

plasma membrane

adherens junction

cell adhesion

actin cytoskeleton

vinculin binding

cell junction

apical junction assembly

cadherin binding

Adherens junction

Tight junction

Leukocyte transendothelial migration

Pathways in cancer

Endometrial cancer

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

204605_at -0.432 7.241 -2.654 1.788e-02 0.270 -3.205 CGRRF1 cell growth regulator with ring finger domain 1 14 54046336 NM_006568 14q22.2 Hs.59106 5

protein binding

response to stress

cell cycle

cell cycle arrest

zinc ion binding

negative regulation of cell proliferation

negative regulation of cell growth

metal ion binding

 
40020_at 0.315 4.436 2.654 1.789e-02 0.270 -3.206 CELSR3 cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila) 3 -48648899 AB011536 3p24.1-p21.2 Hs.631926 10

G-protein coupled receptor activity

G-protein coupled receptor activity

calcium ion binding

protein binding

plasma membrane

homophilic cell adhesion

neuropeptide signaling pathway

multicellular organismal development

integral to membrane

integral to membrane

 
1553016_at 0.369 5.140 2.654 1.790e-02 0.270 -3.206 GPR113 G protein-coupled receptor 113 2 -26386316, -26384544, -26384544 NM_153835 2p23.3 Hs.631878 7

G-protein coupled receptor activity

G-protein coupled receptor activity

plasma membrane

neuropeptide signaling pathway

integral to membrane

integral to membrane

 
219630_at -0.277 4.213 -2.653 1.791e-02 0.270 -3.207 PDZK1IP1 PDZK1 interacting protein 1 1 -47421847 NM_005764 1p33 Hs.431099 16

membrane

integral to membrane

 
226578_s_at 0.350 5.770 2.653 1.792e-02 0.270 -3.207 DUSP1 dual specificity phosphatase 1 5 -172127706 AW024420 5q34 Hs.171695 73

non-membrane spanning protein tyrosine phosphatase activity

protein binding

protein amino acid dephosphorylation

response to oxidative stress

cell cycle

intracellular signaling cascade

hydrolase activity

MAP kinase tyrosine/serine/threonine phosphatase activity

MAPK signaling pathway

214797_s_at 0.520 6.045 2.653 1.792e-02 0.270 -3.207 PCTK3 PCTAIRE protein kinase 3 1 203740349 BC000281 1q31-q32 Hs.445402 13

nucleotide binding

cyclin-dependent protein kinase activity

signal transducer activity

protein binding

ATP binding

cellular_component

protein amino acid phosphorylation

signal transduction

transferase activity

 
215017_s_at 0.307 7.729 2.653 1.793e-02 0.270 -3.207 FNBP1L formin binding protein 1-like 1 93686426 AW270932 1p22.1 Hs.134060 15

cytoplasm

cytoskeleton

plasma membrane

cell cortex

endocytosis

lipid binding

cytoplasmic vesicle

 
223585_x_at -0.789 5.827 -2.652 1.794e-02 0.270 -3.208 KBTBD2 kelch repeat and BTB (POZ) domain containing 2 7 -32874302 AF151831 7p14.3 Hs.372541 4

protein binding

 
202670_at -0.484 8.542 -2.652 1.795e-02 0.270 -3.209 MAP2K1 mitogen-activated protein kinase kinase 1 15 64466264 AI571419 15q22.1-q22.33 Hs.145442 171

nucleotide binding

protein serine/threonine kinase activity

MAP kinase kinase activity

protein tyrosine kinase activity

receptor signaling protein tyrosine phosphatase activity

protein binding

ATP binding

Golgi apparatus

cytosol

protein amino acid phosphorylation

cell motion

chemotaxis

response to oxidative stress

mitosis

Ras protein signal transduction

cell proliferation

transferase activity

neuron differentiation

keratinocyte differentiation

positive regulation of MAP kinase activity

positive regulation of cell differentiation

response to glucocorticoid stimulus

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

Vascular smooth muscle contraction

Dorso-ventral axis formation

VEGF signaling pathway

Focal adhesion

Gap junction

Toll-like receptor signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Long-term potentiation

Neurotrophin signaling pathway

Long-term depression

Regulation of actin cytoskeleton

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Prion diseases

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Thyroid cancer

Melanoma

Bladder cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Non-small cell lung cancer

1556072_at 0.343 3.015 2.652 1.796e-02 0.270 -3.209 C22orf37 chromosome 22 open reading frame 37 22   AK097861 22q11.21 Hs.517397 1    
227766_at -0.507 5.861 -2.652 1.796e-02 0.270 -3.209 LIG4 ligase IV, DNA, ATP-dependent 13 -107657792, -107657792, -107657792 AI829314 13q33-q34 Hs.166091 82

single strand break repair

nucleotide binding

magnesium ion binding

condensed chromosome

in utero embryonic development

pro-B cell differentiation

DNA binding

DNA ligase (ATP) activity

ATP binding

intracellular

nucleus

cytoplasm

plasma membrane

focal adhesion

DNA-dependent protein kinase-DNA ligase 4 complex

DNA replication

nucleotide-excision repair, DNA gap filling

double-strand break repair via nonhomologous end joining

double-strand break repair via nonhomologous end joining

response to DNA damage stimulus

cell cycle

central nervous system development

protein C-terminus binding

cell proliferation

response to X-ray

response to gamma radiation

ligase activity

provirus integration

initiation of viral infection

DNA ligase IV complex

DNA ligase IV complex

T cell differentiation in the thymus

immunoglobulin V(D)J recombination

T cell receptor V(D)J recombination

somatic stem cell maintenance

negative regulation of neuron apoptosis

isotype switching

positive regulation of fibroblast proliferation

positive regulation of neurogenesis

DNA ligation during DNA recombination

DNA ligation during DNA repair

DNA ligation during DNA repair

chromosome organization

cell division

Non-homologous end-joining

1563462_at -1.345 3.885 -2.652 1.796e-02 0.270 -3.209 LOC285419 hypothetical LOC285419 4 124793389, 124914868 AL833449 4q28.1 Hs.535763 1    
204974_at 0.425 5.940 2.652 1.797e-02 0.270 -3.210 RAB3A RAB3A, member RAS oncogene family 19 -18168610 AA988241 19p13.2 Hs.27744 46

nucleotide binding

respiratory system process

GTPase activity

protein binding

protein binding

GTP binding

plasma membrane

mitochondrion organization

small GTPase mediated signal transduction

neuromuscular synaptic transmission

axonogenesis

synaptic vesicle

post-embryonic development

protein transport

synaptic vesicle exocytosis

synaptic vesicle maturation

lung development

regulation of synaptic vesicle fusion to presynaptic membrane

maintenance of presynaptic active zone structure

sensory perception of touch

response to electrical stimulus

 
216602_s_at -0.602 6.123 -2.651 1.799e-02 0.270 -3.211 FARSA phenylalanyl-tRNA synthetase, alpha subunit 19 -12894283 AD000092 19p13.2 Hs.23111 10

tRNA binding

nucleotide binding

phenylalanine-tRNA ligase activity

ATP binding

soluble fraction

cytoplasm

phenylalanyl-tRNA aminoacylation

ligase activity

Aminoacyl-tRNA biosynthesis

218678_at -0.970 7.924 -2.651 1.800e-02 0.270 -3.211 NES nestin 1 -154905179 NM_024609 1q23.1 Hs.527971 87

structural molecule activity

cytoskeleton

intermediate filament

central nervous system development

 
227438_at 0.395 5.751 2.650 1.802e-02 0.270 -3.212 ALPK1 alpha-kinase 1 4 113437947 AI760166 4q25 Hs.652825 10

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

kinase activity

transferase activity

 
218908_at -0.517 5.716 -2.650 1.802e-02 0.270 -3.212 ASPSCR1 alveolar soft part sarcoma chromosome region, candidate 1 17 77528714 NM_024083 17q25.3 Hs.298351 11

molecular_function

protein binding

cellular_component

biological_process

membrane

 
208535_x_at 0.310 5.642 2.650 1.802e-02 0.270 -3.212 COL13A1 collagen, type XIII, alpha 1 10 71231649, 71231649 NM_005203 10q22 Hs.695934 16

morphogenesis of a branching structure

endochondral ossification

extracellular matrix structural constituent

protein binding

collagen type XIII

plasma membrane

cell-matrix adhesion

multicellular organismal development

biological_process

heparin binding

integral to membrane

cell-cell adhesion

cell differentiation

 
205087_at -0.571 7.033 -2.649 1.805e-02 0.270 -3.213 RWDD3 RWD domain containing 3 1 95472298 NM_015485 1p21.3 Hs.709591 11

protein binding

nucleus

cytoplasm

 
229144_at -0.245 5.074 -2.649 1.806e-02 0.270 -3.214 RP1-21O18.1 kazrin 1 14797799, 14797799, 15123211, 15128882, 15145001 AA989362 1p36.21 Hs.368823 10

nucleus

cytoplasm

cytoskeleton

cell junction

desmosome

keratinization

 
218854_at -0.507 6.368 -2.649 1.807e-02 0.270 -3.214 DSE dermatan sulfate epimerase 6 116707975, 116798802 NM_013352 6q22 Hs.486292 10

endoplasmic reticulum

Golgi apparatus

membrane

integral to membrane

isomerase activity

dermatan sulfate biosynthetic process

chondroitin-glucuronate 5-epimerase activity

Chondroitin sulfate biosynthesis

205541_s_at -0.670 6.321 -2.649 1.807e-02 0.270 -3.214 GSPT2 G1 to S phase transition 2 X 51503236 NM_018094 Xp11.22 Hs.59523 10

nucleotide binding

translation release factor activity

GTPase activity

protein binding

protein binding

GTP binding

cytoplasm

translation

cell cycle

 
223022_s_at -0.501 7.699 -2.649 1.808e-02 0.270 -3.215 VTA1 Vps20-associated 1 homolog (S. cerevisiae) 6 142510102 AL136684 6q24.1 Hs.431367 12

cytoplasm

endosome

protein transport

membrane

Endocytosis

225216_at -0.402 7.241 -2.648 1.809e-02 0.270 -3.215 CXorf39 chromosome X open reading frame 39 X 103297956 AI590719 Xq22.2 Hs.496535 Hs.592223 5    
206875_s_at -0.514 7.680 -2.648 1.809e-02 0.270 -3.216 SLK STE20-like kinase (yeast) 10 105717459 NM_014720 10q24.33 Hs.591922 16

nucleotide binding

DNA binding

nuclease activity

protein serine/threonine kinase activity

ATP binding

cytoplasm

plasma membrane

nucleotide-excision repair

protein amino acid phosphorylation

apoptosis

transferase activity

 
209780_at -1.051 9.763 -2.648 1.810e-02 0.270 -3.216 PHTF2 putative homeodomain transcription factor 2 7 77266044, 77266044, 77307382, 77307382 AL136883 7q11.23-q21 Hs.203965 Hs.601884 11

DNA binding

nucleus

endoplasmic reticulum

regulation of transcription

 
229596_at 0.560 3.961 2.648 1.810e-02 0.270 -3.216 AMDHD1 amidohydrolase domain containing 1 12 94861201 AW271617 12q23.1 Hs.424907 4

iron ion binding

cytoplasm

cytosol

histidine metabolic process

zinc ion binding

histidine catabolic process to glutamate and formamide

metal ion binding

imidazolonepropionase activity

Histidine metabolism

Metabolic pathways

239385_at 0.253 2.711 2.648 1.810e-02 0.270 -3.216 TFG TRK-fused gene 3 101910849 AI150613 3q12.2 Hs.518123 25

signal transducer activity

cytoplasm

identical protein binding

positive regulation of I-kappaB kinase/NF-kappaB cascade

Pathways in cancer

Thyroid cancer

1559121_s_at -0.562 5.342 -2.648 1.811e-02 0.270 -3.216 ARIH2 ariadne homolog 2 (Drosophila) 3 48931284 AI767566 3p21.2-p21.3 Hs.633601 14

nucleic acid binding

protein binding

nucleus

ubiquitin-dependent protein catabolic process

multicellular organismal development

zinc ion binding

metal ion binding

 
224467_s_at 0.278 7.400 2.648 1.811e-02 0.270 -3.217 PDCD2L programmed cell death 2-like 19 39587142 BC006146 19q13.11 Hs.515344 5

cytoplasm

 
213970_at -0.416 6.439 -2.648 1.812e-02 0.270 -3.217 RABL3 RAB, member of RAS oncogene family-like 3 3 -121888217 AA744682 3q13.33 Hs.444360 1

nucleotide binding

GTP binding

intracellular

small GTPase mediated signal transduction

 
204920_at 0.452 5.192 2.647 1.812e-02 0.270 -3.217 CPS1 carbamoyl-phosphate synthetase 1, mitochondrial 2 211050653, 211129570, 211166334 AF154830 2q35 Hs.149252 23

urea cycle

nucleotide binding

carbamoyl-phosphate synthase (ammonia) activity

protein binding

ATP binding

mitochondrion

glycogen catabolic process

glutamine metabolic process

ligase activity

citrulline biosynthetic process

triglyceride catabolic process

response to lipopolysaccharide

mitochondrial nucleoid

positive regulation of vasodilation

nitric oxide metabolic process

carbamoyl phosphate biosynthetic process

Alanine, aspartate and glutamate metabolism

Arginine and proline metabolism

Nitrogen metabolism

Metabolic pathways

212598_at -0.455 4.839 -2.647 1.812e-02 0.270 -3.217 WDFY3 WD repeat and FYVE domain containing 3 4 -85949008, -85809722, -85809722 BE348236 4q21.23 Hs.480116 10

binding

zinc ion binding

membrane

metal ion binding

 
215092_s_at -0.460 4.446 -2.647 1.813e-02 0.270 -3.217 NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 16 68156497 AJ005683 16q22.1 Hs.371987 35

cytokine production

transcription factor activity

RNA polymerase II transcription factor activity

protein binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

signal transduction

excretion

positive regulation of transcription from RNA polymerase II promoter

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

212197_x_at -0.341 8.775 -2.647 1.815e-02 0.271 -3.218 MPRIP myosin phosphatase Rho interacting protein 17 16886831, 16886831 AB020671 17p11.2 Hs.462341 16

actin binding

protein binding

cytoplasm

cytoskeleton

 
1557067_s_at -0.445 6.063 -2.646 1.816e-02 0.271 -3.219 LUC7L LUC7-like (S. cerevisiae) 16 -178974, -178970 AI744735 16p13.3 Hs.16803 11

protein binding

nucleus

zinc ion binding

negative regulation of striated muscle development

metal ion binding

RS domain binding

 
222407_s_at -0.601 10.913 -2.646 1.817e-02 0.271 -3.219 ZFP106 zinc finger protein 106 homolog (mouse) 15 -40492312 AI493587 15q15.1 Hs.511143 9

opioid peptide activity

intracellular

membrane fraction

nucleus

nucleolus

cytosol

zinc ion binding

insulin receptor signaling pathway

SH3 domain binding

metal ion binding

 
225694_at -0.500 5.206 -2.645 1.823e-02 0.271 -3.222 CRKRS Cdc2-related kinase, arginine/serine-rich 17 34871264 AI823766 17q12 Hs.416108 11

nucleotide binding

RNA polymerase II transcription factor activity

cyclin-dependent protein kinase activity

ATP binding

nucleus

nuclear speck

transferase activity

protein amino acid autophosphorylation

 
231228_at 0.351 5.642 2.644 1.823e-02 0.271 -3.222 BCL2L1 BCL2-like 1 20 -29715921 AW263226 20q11.21 Hs.516966 295

release of cytochrome c from mitochondria

nucleus

mitochondrion

mitochondrial outer membrane

mitochondrial outer membrane

anti-apoptosis

negative regulation of survival gene product expression

membrane

integral to membrane

response to cytokine stimulus

identical protein binding

regulation of mitochondrial membrane permeability

regulation of mitochondrial membrane potential

Apoptosis

Jak-STAT signaling pathway

Amyotrophic lateral sclerosis (ALS)

Pathways in cancer

Pancreatic cancer

Chronic myeloid leukemia

Small cell lung cancer

202588_at -0.367 8.800 -2.644 1.824e-02 0.272 -3.223 AK1 adenylate kinase 1 9 -129668579 NM_000476 9q34.1 Hs.175473 24

nucleotide binding

adenylate kinase activity

protein binding

ATP binding

nucleus

cytoplasm

mitochondrion

cytosol

plasma membrane

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

cell cycle arrest

transferase activity

nucleoside kinase activity

ATP metabolic process

Purine metabolism

Metabolic pathways

235910_x_at 0.368 4.300 2.644 1.825e-02 0.272 -3.223 ZNF316 zinc finger protein 316 7   BE674951 7p22.1 Hs.112668 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
212837_at -0.346 7.849 -2.643 1.827e-02 0.272 -3.224 FAM175B family with sequence similarity 175, member B 10 126480343 D63877 10q26.13 Hs.280695 10

protein binding

polyubiquitin binding

BRISC complex

 
223567_at 0.282 3.275 2.643 1.828e-02 0.272 -3.225 SEMA6B sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B 19 -4493599 AB022433 19p13.3 Hs.465642 4

receptor activity

multicellular organismal development

nervous system development

membrane

integral to membrane

cell differentiation

Axon guidance

219131_at -0.241 5.837 -2.643 1.829e-02 0.272 -3.225 UBIAD1 UbiA prenyltransferase domain containing 1 1 11255841 NM_013319 1p36-p34.1 Hs.522933 15

prenyltransferase activity

nucleus

cytoplasm

membrane

integral to membrane

 
207000_s_at -0.319 7.507 -2.643 1.830e-02 0.272 -3.226 PPP3CC protein phosphatase 3 (formerly 2B), catalytic subunit, gamma isoform 8 22354540 NM_005605 8p21.3 Hs.655661 21

phosphoprotein phosphatase activity

iron ion binding

calmodulin binding

cytosol

zinc ion binding

activation of pro-apoptotic gene products

hydrolase activity

metal ion binding

MAPK signaling pathway

Calcium signaling pathway

Apoptosis

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Long-term potentiation

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

215424_s_at -0.548 7.230 -2.642 1.832e-02 0.272 -3.227 SNW1 SNW domain containing 1 14 -77253696 AV689564 14q24.3 Hs.445498 32

nuclear mRNA splicing, via spliceosome

transcription coactivator activity

Notch binding

protein binding

nucleus

spliceosomal complex

nucleolus

regulation of transcription from RNA polymerase II promoter

RNA splicing

negative regulation of transcription

Notch signaling pathway

219701_at -0.302 2.575 -2.642 1.833e-02 0.272 -3.227 TMOD2 tropomodulin 2 (neuronal) 15 49831049 NM_014548 15q21.1-q21.2 Hs.513734 Hs.659839 7

actin binding

tropomyosin binding

cytoplasm

cytoskeleton

nerve-nerve synaptic transmission

nervous system development

learning or memory

positive regulation of G-protein coupled receptor protein signaling pathway

 
244041_at -0.378 4.882 -2.641 1.835e-02 0.272 -3.228 STX6 syntaxin 6 1 -179208798 AI884934 1q25.3 Hs.518417 24

SNAP receptor activity

membrane fraction

early endosome

Golgi apparatus

trans-Golgi network

plasma membrane

intracellular protein transport

vesicle fusion

endosome organization

integral to membrane

clathrin-coated vesicle

Golgi vesicle transport

perinuclear region of cytoplasm

SNARE interactions in vesicular transport

201160_s_at -0.252 12.837 -2.641 1.835e-02 0.272 -3.228 CSDA cold shock domain protein A 12 -10742944 AL556190 12p13.1 Hs.221889 20

negative regulation of transcription from RNA polymerase II promoter

double-stranded DNA binding

transcription factor activity

RNA polymerase II transcription factor activity

transcription corepressor activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

response to cold

Tight junction

228160_at -0.420 6.157 -2.641 1.836e-02 0.272 -3.229 LOC339290 hypothetical LOC339290 18 5228098 AI433706 18p11.31 Hs.643553 Hs.700799 4    
217987_at -0.489 8.972 -2.640 1.841e-02 0.273 -3.231 ASNSD1 asparagine synthetase domain containing 1 2 190234369 NM_019048 2p24.3-q21.3 Hs.101364 3

asparagine synthase (glutamine-hydrolyzing) activity

asparagine biosynthetic process

glutamine metabolic process

cellular amino acid biosynthetic process

 
215000_s_at -0.691 9.974 -2.639 1.843e-02 0.273 -3.232 FEZ2 fasciculation and elongation protein zeta 2 (zygin II) 2 -36632904 AL117593 2p21 Hs.258563 9

protein binding

signal transduction

nervous system development

axon guidance

 
203700_s_at -0.485 4.945 -2.638 1.846e-02 0.273 -3.234 DIO2 deiodinase, iodothyronine, type II 14 -79733621, -79733621 NM_013989 14q24.2-q24.3 Hs.202354 61

selenocysteine incorporation

thyroxine 5'-deiodinase activity

thyroid hormone generation

selenium binding

membrane

integral to membrane

thyroid hormone catabolic process

hormone biosynthetic process

oxidation reduction

 
242114_at -0.494 5.000 -2.638 1.846e-02 0.273 -3.234 BOLA2 bolA homolog 2 (E. coli) 16 -30111756, -29372414 BF088991 16p11.2 Hs.444600 Hs.655267 5    
1552482_at 0.258 2.332 2.638 1.847e-02 0.274 -3.234 RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 2 -204014436, -204006783 NM_025252 2q33 Hs.471162 13

nucleus

cytoplasm

cytoskeleton

plasma membrane

cell-matrix adhesion

signal transduction

lamellipodium

filopodium

 
202309_at 0.353 8.723 2.638 1.848e-02 0.274 -3.234 MTHFD1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase 14 63924511 NM_005956 14q24 Hs.652308 68

histidine biosynthetic process

nucleotide binding

formate-tetrahydrofolate ligase activity

methenyltetrahydrofolate cyclohydrolase activity

methylenetetrahydrofolate dehydrogenase (NADP+) activity

protein binding

ATP binding

cytoplasm

mitochondrion

purine nucleotide biosynthetic process

histidine catabolic process

one-carbon metabolic process

cellular amino acid biosynthetic process

methionine biosynthetic process

folic acid and derivative biosynthetic process

formyltetrahydrofolate dehydrogenase activity

oxidoreductase activity

hydrolase activity

ligase activity

oxidation reduction

Glyoxylate and dicarboxylate metabolism

One carbon pool by folate

Metabolic pathways

206947_at -0.277 2.632 -2.638 1.848e-02 0.274 -3.234 B3GALT5 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5 21 39951123 NM_006057 21q22.3 Hs.655094 19

endoplasmic reticulum

Golgi apparatus

protein amino acid glycosylation

galactosyltransferase activity

UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity

membrane

integral to membrane

transferase activity, transferring glycosyl groups

Glycosphingolipid biosynthesis - lacto and neolacto series

Glycosphingolipid biosynthesis - globo series

Metabolic pathways

235457_at 0.597 5.597 2.637 1.851e-02 0.274 -3.236 MAML2 mastermind-like 2 (Drosophila) 11 -95351087 AI769569 11q21 Hs.428214 17

transcription coactivator activity

nucleus

Notch signaling pathway

nuclear speck

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

Notch signaling pathway

217940_s_at -0.383 7.691 -2.637 1.851e-02 0.274 -3.236 CARKD carbohydrate kinase domain containing 13 110066008 NM_018210 13q34 Hs.408324 5

molecular_function

cellular_component

biological_process

 
220164_s_at 0.587 8.534 2.637 1.851e-02 0.274 -3.236 FBXO40 F-box protein 40 3 122794859 NM_016298 3q13.33 Hs.272564 7

molecular_function

cellular_component

biological_process

zinc ion binding

modification-dependent protein catabolic process

metal ion binding

 
225843_at 0.288 6.218 2.637 1.851e-02 0.274 -3.236 ZFYVE19 zinc finger, FYVE domain containing 19 15 38886565 AW015263 15q15.1 Hs.121676 8

protein binding

zinc ion binding

metal ion binding

 
1558214_s_at -0.263 5.290 -2.637 1.852e-02 0.274 -3.236 CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 5 138117005 BG330076 5q31 Hs.534797 Hs.656653 70

structural molecule activity

protein binding

cytoplasm

plasma membrane

adherens junction

cell adhesion

actin cytoskeleton

vinculin binding

cell junction

apical junction assembly

cadherin binding

Adherens junction

Tight junction

Leukocyte transendothelial migration

Pathways in cancer

Endometrial cancer

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

1562031_at -0.781 4.113 -2.637 1.852e-02 0.274 -3.237 JAK2 Janus kinase 2 9 4975244 BC043187 9p24 Hs.656213 588

nucleotide binding

non-membrane spanning protein tyrosine kinase activity

Janus kinase activity

receptor binding

growth hormone receptor binding

interleukin-12 receptor binding

ATP binding

nucleus

cytoplasm

cytoskeleton

caveola

apoptosis

cell motion

enzyme linked receptor protein signaling pathway

tyrosine phosphorylation of STAT protein

STAT protein nuclear translocation

mesoderm development

negative regulation of cell proliferation

positive regulation of phosphoinositide 3-kinase cascade

membrane

transferase activity

myeloid cell differentiation

SH2 domain binding

positive regulation of tyrosine phosphorylation of Stat3 protein

positive regulation of tyrosine phosphorylation of Stat5 protein

negative regulation of DNA binding

response to antibiotic

positive regulation of peptidyl-tyrosine phosphorylation

JAK-STAT cascade involved in growth hormone signaling pathway

positive regulation of growth hormone receptor signaling pathway

Chemokine signaling pathway

Jak-STAT signaling pathway

Adipocytokine signaling pathway

213718_at -0.369 5.584 -2.637 1.852e-02 0.274 -3.237 RBM4 RNA binding motif protein 4 11 66162713 BE222257 11q13 Hs.533712 20

nucleotide binding

RNA binding

nucleus

nucleolus

cytoplasm

mRNA processing

zinc ion binding

RNA splicing

metal ion binding

 
203183_s_at 0.250 4.668 2.637 1.852e-02 0.274 -3.237 SMARCD1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 12 48765249 NM_003076 12q13-q14 Hs.79335 23

transcription coactivator activity

nucleus

nucleoplasm

nucleolus

regulation of transcription from RNA polymerase II promoter

SWI/SNF complex

chromatin remodeling complex

protein complex scaffold

chromatin-mediated maintenance of transcription

 
226111_s_at 0.269 5.160 2.635 1.857e-02 0.274 -3.239 ZNF385A zinc finger protein 385A 12 -53049186, -53049186 BF525395 12q13.13 Hs.505653 8

DNA binding

protein binding

intracellular

nucleus

nucleolus

cytoplasm

zinc ion binding

regulation of transcription

metal ion binding

 
219545_at 0.238 5.266 2.635 1.859e-02 0.274 -3.240 KCTD14 potassium channel tetramerisation domain containing 14 11 -77404408 NM_023930 11q14.1 Hs.709780 2

voltage-gated potassium channel activity

protein binding

potassium ion transport

voltage-gated potassium channel complex

membrane

 
213898_at 0.312 4.066 2.635 1.859e-02 0.274 -3.240 RBM9 RNA binding motif protein 9 22 -34464728, -34464728 AW149379 22q13.1 Hs.282998 18

nucleotide binding

transcription corepressor activity

RNA binding

nucleus

cytoplasm

mRNA processing

transcription factor binding

RNA splicing

RNA metabolic process

negative regulation of transcription

estrogen receptor signaling pathway

regulation of cell proliferation

 
226064_s_at 0.487 5.869 2.635 1.859e-02 0.274 -3.240 DGAT2 diacylglycerol O-acyltransferase homolog 2 (mouse) 11 75157425 AW469523 11q13.5 Hs.334305 16

2-acylglycerol O-acyltransferase activity

diacylglycerol O-acyltransferase activity

membrane fraction

endoplasmic reticulum

glycerol metabolic process

acyltransferase activity

lipid biosynthetic process

membrane

integral to membrane

transferase activity

triglyceride biosynthetic process

Glycerolipid metabolism

Retinol metabolism

Metabolic pathways

201860_s_at 0.433 5.248 2.634 1.861e-02 0.274 -3.241 PLAT plasminogen activator, tissue 8 -42151392 NM_000930 8p12 Hs.491582 209

serine-type endopeptidase activity

extracellular region

extracellular region

extracellular space

protein modification process

proteolysis

blood coagulation

peptidase activity

Complement and coagulation cascades

205189_s_at 0.316 6.065 2.634 1.862e-02 0.274 -3.241 FANCC Fanconi anemia, complementation group C 9 -96901156 NM_000136 9q22.3 Hs.494529 77

protein binding

nucleus

cytoplasm

cytosol

DNA repair

protein complex assembly

response to DNA damage stimulus

 
211711_s_at -0.801 4.674 -2.634 1.862e-02 0.274 -3.241 PTEN phosphatase and tensin homolog 10 89613174 BC005821 10q23.3 Hs.500466 557

regulation of cyclin-dependent protein kinase activity

magnesium ion binding

angiogenesis

phosphatidylinositol-3-phosphatase activity

protein serine/threonine phosphatase activity

protein tyrosine phosphatase activity

platelet-derived growth factor receptor binding

protein binding

nucleus

cytoplasm

cytoplasm

cytosol

protein amino acid dephosphorylation

protein amino acid dephosphorylation

lipid metabolic process

induction of apoptosis

central nervous system development

protein tyrosine/serine/threonine phosphatase activity

negative regulation of cell proliferation

lipid binding

phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity

phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity

hydrolase activity

PDZ domain binding

negative regulation of cell migration

neuron projection development

regulation of protein stability

negative regulation of apoptosis

endothelial cell migration

inositol phosphate dephosphorylation

phosphoinositide dephosphorylation

platelet-derived growth factor receptor signaling pathway

cardiac muscle tissue development

inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity

phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity

negative regulation of focal adhesion formation

negative regulation of protein kinase B signaling cascade

Inositol phosphate metabolism

Phosphatidylinositol signaling system

p53 signaling pathway

Focal adhesion

Tight junction

Pathways in cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Small cell lung cancer

210946_at -0.387 8.838 -2.634 1.863e-02 0.274 -3.242 PPAP2A phosphatidic acid phosphatase type 2A 5 -54756439 AF014403 5q11 Hs.696231 20

membrane fraction

cytosol

plasma membrane

integral to plasma membrane

activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway

phosphatidate phosphatase activity

phosphatidate phosphatase activity

phosphatidate phosphatase activity

negative regulation of cell proliferation

germ cell migration

hydrolase activity

regulation of lipid metabolic process

androgen receptor signaling pathway

phospholipid dephosphorylation

Glycerolipid metabolism

Glycerophospholipid metabolism

Ether lipid metabolism

Sphingolipid metabolism

Metabolic pathways

Fc gamma R-mediated phagocytosis

227583_at -0.229 5.526 -2.633 1.866e-02 0.275 -3.243 POP4 processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae) 19 34789009 BE742653 19q12 Hs.412870 13

ribonuclease MRP complex

RNA binding

ribonuclease P activity

ribonuclease activity

nucleus

nucleolar ribonuclease P complex

nucleolus

rRNA processing

mRNA cleavage

tRNA processing

hydrolase activity

ribonuclease P complex

identical protein binding

 
202606_s_at -0.382 7.210 -2.633 1.867e-02 0.275 -3.244 TLK1 tousled-like kinase 1 2 -171555578, -171555578, -171555578 NM_012290 2q31.1 Hs.719163 23

nucleotide binding

regulation of chromatin assembly or disassembly

protein serine/threonine kinase activity

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

nucleus

protein amino acid phosphorylation

intracellular protein transport

response to DNA damage stimulus

cell cycle

intracellular signaling cascade

chromatin modification

transferase activity

 
1554966_a_at -0.651 7.394 -2.632 1.868e-02 0.275 -3.244 FILIP1L filamin A interacting protein 1-like 3 -101049461, -101049461, -101034677 AF329092 3q12.1 Hs.104672 8

molecular_function

nucleus

cytoplasm

biological_process

membrane

myosin complex

 
233328_x_at 0.281 5.249 2.632 1.868e-02 0.275 -3.244 SLC17A9 solute carrier family 17, member 9 20 61054443 AL121673 20q13.33 Hs.512686 7

transporter activity

transport

exocytosis

membrane

integral to membrane

 
209496_at 0.420 6.304 2.632 1.870e-02 0.275 -3.245 RARRES2 retinoic acid receptor responder (tazarotene induced) 2 7 -149666340 BC000069 7q36.1 Hs.647064 22

retinoid metabolic process

molecular_function

extracellular region

brown fat cell differentiation

 
1559101_at 0.340 5.469 2.631 1.872e-02 0.275 -3.246 FYN FYN oncogene related to SRC, FGR, YES 6 -112089177, -112089177, -112089177 AK090692 6q21 Hs.390567 326

nucleotide binding

glycoprotein binding

non-membrane spanning protein tyrosine kinase activity

ATP binding

endosome

cytosol

plasma membrane

protein amino acid phosphorylation

calcium ion transport

protein kinase cascade

multicellular organismal development

learning

feeding behavior

transferase activity

manganese ion binding

identical protein binding

interspecies interaction between organisms

metal ion binding

T cell receptor signaling pathway

Axon guidance

Focal adhesion

Adherens junction

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

Fc epsilon RI signaling pathway

Prion diseases

Pathogenic Escherichia coli infection - EHEC

202417_at -0.515 8.783 -2.631 1.872e-02 0.275 -3.246 KEAP1 kelch-like ECH-associated protein 1 19 -10457795, -10457795 NM_012289 19p13.2 Hs.465870 51

in utero embryonic development

protein binding

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

centrosome

transcription regulator activity

regulation of transcription

regulation of epidermal cell differentiation

Ubiquitin mediated proteolysis

205428_s_at 0.276 4.777 2.631 1.872e-02 0.275 -3.246 CALB2 calbindin 2 16 69950126, 69950126 NM_001740 16q22.2 Hs.106857 33

calcium ion binding

gap junction

 
225300_at -0.436 6.369 -2.631 1.875e-02 0.275 -3.247 C15orf23 chromosome 15 open reading frame 23 15 38462213 BF792864 15q15.1 Hs.525796 6

protein binding

nucleus

 
213325_at -0.419 3.201 -2.630 1.876e-02 0.275 -3.248 PVRL3 poliovirus receptor-related 3 3 112273554 AA129716 3q13 Hs.293917 9

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

protein homodimerization activity

cell adhesion molecule binding

Cell adhesion molecules (CAMs)

Adherens junction

226324_s_at 0.245 5.946 2.630 1.876e-02 0.275 -3.248 IFT172 intraflagellar transport 172 homolog (Chlamydomonas) 2 -27520743 AB033005 2p23.3 Hs.127401 4

neural tube formation

protein binding

cilium

smoothened signaling pathway

multicellular organismal development

determination of left/right symmetry

dorsal/ventral pattern formation

protein processing

cilium assembly

 
204810_s_at 0.211 13.769 2.630 1.877e-02 0.275 -3.249 CKM creatine kinase, muscle 19 -50501510 NM_001824 19q13.2-q13.3 Hs.334347 43

nucleotide binding

creatine kinase activity

ATP binding

cytoplasm

cytosol

creatine metabolic process

phosphocreatine biosynthetic process

Arginine and proline metabolism

Metabolic pathways

225238_at -0.890 6.014 -2.629 1.879e-02 0.276 -3.249 MSI2 musashi homolog 2 (Drosophila) 17 52688929, 52689372 BF435123 17q22 Hs.658922 7

nucleotide binding

RNA binding

cytoplasm

 
219400_at 0.283 5.054 2.629 1.880e-02 0.276 -3.250 CNTNAP1 contactin associated protein 1 17 38088157 NM_003632 17q21 Hs.408730 10

receptor activity

SH3/SH2 adaptor activity

receptor binding

integral to plasma membrane

cell adhesion

signal transduction

membrane

SH3 domain binding

paranode region of axon

Cell adhesion molecules (CAMs)

228765_at -0.551 8.877 -2.629 1.880e-02 0.276 -3.250 GTF2IRD2 GTF2I repeat domain containing 2 7 -73848419 BG032651 7q11.23 Hs.647017 Hs.647039 7

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

 
228099_at 0.470 6.394 2.628 1.883e-02 0.276 -3.251 ZNF550 zinc finger protein 550 19 -62750154 AI805301 19q13.43 Hs.180257 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
231509_at 0.334 4.313 2.628 1.885e-02 0.276 -3.252 C7orf16 chromosome 7 open reading frame 16 7 31693323 AW614524 7p15 Hs.227011 8

protein serine/threonine phosphatase inhibitor activity

soluble fraction

protein amino acid phosphorylation

signal transduction

protein kinase cascade

central nervous system development

behavior

Long-term depression

225179_at -0.540 7.146 -2.627 1.888e-02 0.276 -3.254 UBE2K ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast) 4 39376058 AA161140 4p14 Hs.50308 Hs.714332 20

nucleotide binding

ubiquitin-protein ligase activity

protein binding

ATP binding

cytoplasm

ubiquitin-dependent protein catabolic process

ligase activity

ubiquitin protein ligase binding

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

202260_s_at 0.347 5.791 2.627 1.888e-02 0.276 -3.254 STXBP1 syntaxin binding protein 1 9 129414306 NM_003165 9q34.1 Hs.288229 38

protein binding

cytoplasm

mitochondrion

vesicle docking during exocytosis

axon target recognition

protein transport

membrane

synaptic vesicle maturation

vesicle-mediated transport

negative regulation of synaptic transmission, GABAergic

 
214065_s_at 0.299 4.956 2.627 1.890e-02 0.276 -3.254 CIB2 calcium and integrin binding family member 2 15 -76184045 BG251252 15q24 Hs.129867 6

calcium ion binding

protein binding

 
244655_at 0.532 4.113 2.626 1.890e-02 0.276 -3.255 LOC100132798 similar to hCG1774772 15   W68045 15q26.2        
204778_x_at 0.363 6.252 2.626 1.891e-02 0.276 -3.255 HOXB7 homeobox B7 17 -44039593 AW102783 17q21.3 Hs.436181 39

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anterior/posterior pattern formation

myeloid cell differentiation

sequence-specific DNA binding

embryonic skeletal system morphogenesis

 
215167_at 0.741 6.711 2.626 1.891e-02 0.276 -3.255 MED14 mediator complex subunit 14 X -40393738 BE567032 Xp11.4-p11.2 Hs.407604 33

receptor activity

protein binding

nucleus

transcription initiation from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

ligand-dependent nuclear receptor transcription coactivator activity

androgen receptor signaling pathway

vitamin D receptor binding

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

thyroid hormone receptor binding

 
216887_s_at -0.569 11.269 -2.626 1.893e-02 0.276 -3.256 LDB3 LIM domain binding 3 10 88418300, 88418405, 88418405 AJ133768 10q22.3-q23.2 Hs.657271 15

protein binding

cytoplasm

cytoskeleton

zinc ion binding

Z disc

pseudopodium

metal ion binding

perinuclear region of cytoplasm

 
227828_s_at 0.397 4.614 2.625 1.894e-02 0.276 -3.256 FAM176A family with sequence similarity 176, member A 2 -75572951, -75572951 AV700753 2p12 Hs.302346 9

cytoplasm

lysosome

endoplasmic reticulum

plasma membrane

autophagy

apoptosis

integral to membrane

 
221822_at -0.521 6.879 -2.625 1.894e-02 0.276 -3.256 CCDC101 coiled-coil domain containing 101 16 28472749 BE544663 16p11.2 Hs.655476 6

nucleus

regulation of transcription

 
200071_at -0.594 8.339 -2.625 1.894e-02 0.276 -3.257 SMNDC1 survival motor neuron domain containing 1 10 -112042787 BF224259 10q23 Hs.632093 12

spliceosome assembly

RNA binding

protein binding

nucleus

spliceosomal complex

cytoplasm

mRNA processing

apoptosis

induction of apoptosis

RNA splicing

Cajal body

nuclear speck

RNA splicing factor activity, transesterification mechanism

 
218091_at -0.312 6.986 -2.625 1.895e-02 0.276 -3.257 AGFG1 ArfGAP with FG repeats 1 2 228045131 AI989512 2q36.3 Hs.352962 29

DNA binding

RNA binding

protein binding

nucleus

nuclear pore

Golgi apparatus

mRNA export from nucleus

transport

multicellular organismal development

spermatogenesis

ARF GTPase activator activity

zinc ion binding

cell differentiation

cytoplasmic vesicle

regulation of ARF GTPase activity

metal ion binding

 
1558705_at 0.370 5.991 2.625 1.896e-02 0.276 -3.257 ATOH8 atonal homolog 8 (Drosophila) 2 85834419 AL831857 2p11.2 Hs.135569 Hs.436464 5

DNA binding

nucleus

multicellular organismal development

nervous system development

cell differentiation

transcription regulator activity

regulation of transcription

 
202432_at -0.712 11.048 -2.625 1.896e-02 0.276 -3.257 PPP3CB protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform 10 -74866569 NM_021132 10q21-q22 Hs.500067 29

protein serine/threonine phosphatase activity

iron ion binding

calcium ion binding

calmodulin binding

calcineurin complex

signal transduction

zinc ion binding

hydrolase activity

MAPK signaling pathway

Calcium signaling pathway

Apoptosis

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Long-term potentiation

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

229039_at 0.357 4.974 2.625 1.896e-02 0.276 -3.257 SYN2 synapsin II 3 12020861, 12020861 BE220333 3p25 Hs.445503 22

catalytic activity

protein binding

ATP binding

synaptic transmission

neurotransmitter secretion

cell junction

synaptic vesicle membrane

synapse

 
242002_at 0.447 4.931 2.625 1.897e-02 0.276 -3.258 NKAIN2 Na+/K+ transporting ATPase interacting 2 6 124166767 N62814 6q21 Hs.656604 6

plasma membrane

integral to membrane

 
204469_at 0.283 2.139 2.624 1.898e-02 0.276 -3.258 PTPRZ1 protein tyrosine phosphatase, receptor-type, Z polypeptide 1 7 121300394 NM_002851 7q31.3 Hs.489824 42

transmembrane receptor protein tyrosine phosphatase activity

protein binding

cellular_component

integral to plasma membrane

protein amino acid dephosphorylation

central nervous system development

biological_process

protein tyrosine/threonine phosphatase activity

membrane

hydrolase activity

Epithelial cell signaling in Helicobacter pylori infection

226960_at 0.320 4.462 2.624 1.898e-02 0.276 -3.258 CXCL17 chemokine (C-X-C motif) ligand 17 19 -47624534 AW471176 19q13.2 Hs.445586 6

angiogenesis

extracellular region

chemotaxis

multicellular organismal development

cell differentiation

 
213215_at -0.385 7.231 -2.624 1.898e-02 0.276 -3.259 AP3S2 adaptor-related protein complex 3, sigma 2 subunit 15 -88174834 AI910895 15q26.1 Hs.632161 14

protein binding

Golgi apparatus

intracellular protein transport

protein transporter activity

membrane

vesicle-mediated transport

membrane coat

cytoplasmic vesicle

Lysosome

1564300_at 0.358 3.458 2.624 1.899e-02 0.276 -3.259 LOC100129058 similar to hCG2038656 3   AK097471 3p21.2   1    
1554949_at 0.302 5.454 2.623 1.902e-02 0.277 -3.260 LOC554174 hypothetical LOC554174 22   BC009388 22q13.31 Hs.660824 1    
212535_at -0.301 8.997 -2.623 1.902e-02 0.277 -3.260 MEF2A myocyte enhancer factor 2A 15 97923655, 97990705 AA142929 15q26 Hs.268675 77

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

apoptosis

multicellular organismal development

nervous system development

muscle organ development

cell differentiation

sequence-specific DNA binding

 
200961_at -0.421 8.180 -2.623 1.902e-02 0.277 -3.260 SEPHS2 selenophosphate synthetase 2 16 -30362452 NM_012248 16p11.2 Hs.718460 7

nucleotide binding

selenide, water dikinase activity

ATP binding

cellular_component

selenium binding

selenocysteine biosynthetic process

transferase activity

Selenoamino acid metabolism

Metabolic pathways

223666_at -0.398 5.137 -2.623 1.904e-02 0.277 -3.261 SNX5 sorting nexin 5 20 -17870243, -17870243 BC002724 20p11 Hs.316890 14

protein binding

cell communication

protein transport

phosphoinositide binding

 
211717_at -0.513 6.045 -2.623 1.905e-02 0.277 -3.262 ANKRD40 ankyrin repeat domain 40 17 -46125550 BC005853 17q21.33 Hs.463426 2    
204698_at 0.427 4.385 2.623 1.905e-02 0.277 -3.262 ISG20 interferon stimulated exonuclease gene 20kDa 15 86983042 NM_002201 15q26 Hs.459265 10

3'-5'-exoribonuclease activity

DNA catabolic process, exonucleolytic

RNA binding

exonuclease activity

intracellular

nucleus

nucleoplasm

RNA catabolic process

cell proliferation

single-stranded DNA specific 3'-5' exodeoxyribonuclease activity

exoribonuclease II activity

response to virus

PML body

hydrolase activity

manganese ion binding

metal ion binding

 
203198_at -0.378 5.619 -2.622 1.906e-02 0.277 -3.262 CDK9 cyclin-dependent kinase 9 9 129588125 NM_001261 9q34.1 Hs.150423 Hs.706809 172

nucleotide binding

DNA binding

cyclin-dependent protein kinase activity

protein binding

ATP binding

nucleus

nucleoplasm

nucleolus

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

protein amino acid phosphorylation

transcription elongation factor complex

cell proliferation

RNA polymerase II carboxy-terminal domain kinase activity

transferase activity

snRNA binding

regulation of transcription

 
210976_s_at -0.563 12.191 -2.622 1.907e-02 0.277 -3.263 PFKM phosphofructokinase, muscle 12 46799294 U24183 12q13.3 Hs.75160 35

nucleotide binding

magnesium ion binding

6-phosphofructokinase activity

6-phosphofructokinase activity

6-phosphofructokinase activity

ATP binding

sugar binding

soluble fraction

cytoplasm

cytosol

cytosol

6-phosphofructokinase complex

fructose 6-phosphate metabolic process

glycolysis

protein C-terminus binding

kinase activity

apical plasma membrane

transferase activity

kinase binding

fructose 1,6-bisphosphate metabolic process

positive regulation of insulin secretion

glucose homeostasis

identical protein binding

muscle maintenance

protein oligomerization

fructose-6-phosphate binding

Glycolysis / Gluconeogenesis

Pentose phosphate pathway

Fructose and mannose metabolism

Galactose metabolism

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

37425_g_at 0.341 5.564 2.622 1.907e-02 0.277 -3.263 CCHCR1 coiled-coil alpha-helical rod protein 1 6 -31218194, -31218194, -2561482, -2561482, -2359996, -2359996 AB029343 6p21.3 Hs.485075 23

protein binding

nucleus

cytoplasm

protein export from nucleus

multicellular organismal development

cell differentiation

 
211317_s_at -0.630 7.298 -2.622 1.907e-02 0.277 -3.263 CFLAR CASP8 and FADD-like apoptosis regulator 2 201689060, 201689134, 201691631 AF041461 2q33-q34 Hs.390736 163

cysteine-type endopeptidase activity

protein binding

proteolysis

anti-apoptosis

induction of apoptosis by extracellular signals

regulation of apoptosis

positive regulation of I-kappaB kinase/NF-kappaB cascade

interspecies interaction between organisms

Apoptosis

235353_at 0.303 3.611 2.622 1.908e-02 0.277 -3.263 KIAA0746 KIAA0746 protein 4 -25358146 AI887866 4p15.2 Hs.479384 5

binding

membrane

integral to membrane

 
210460_s_at -0.504 10.033 -2.622 1.909e-02 0.277 -3.263 PSMD4 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 1 149493820 AB033605 1q21.3 Hs.505059 62

proteasome complex

protein binding

cytosol

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

226640_at -0.315 5.747 -2.621 1.909e-02 0.277 -3.264 DAGLB diacylglycerol lipase, beta 7 -6415272 AA015606 7p22.1 Hs.487498 9

triacylglycerol lipase activity

calcium ion binding

plasma membrane

integral to membrane

lipid catabolic process

hydrolase activity

 
203978_at -0.311 7.047 -2.620 1.914e-02 0.277 -3.266 NUBP1 nucleotide binding protein 1 (MinD homolog, E. coli) 16 10745198 NM_002484 16p13.13 Hs.81469 9

nucleotide binding

protein binding

ATP binding

cytosol

cellular iron ion homeostasis

cell growth

iron-sulfur cluster assembly

nucleoside-triphosphatase activity

iron-sulfur cluster binding

 
221763_at -0.556 7.283 -2.620 1.915e-02 0.277 -3.266 JMJD1C jumonji domain containing 1C 10 -64596993, -64596993 AI694023 10q21.3 Hs.413416 10

iron ion binding

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

oxidoreductase activity

chromatin modification

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

metal ion binding

thyroid hormone receptor binding

oxidation reduction

 
234926_s_at -0.358 8.953 -2.620 1.915e-02 0.277 -3.267 C20orf43 chromosome 20 open reading frame 43 20 54477053 AK026118 20q13.31 Hs.517134 10

molecular_function

cellular_component

biological_process

 
213842_x_at -0.379 7.885 -2.620 1.916e-02 0.277 -3.267 NSUN5C NOL1/NOP2/Sun domain family, member 5C 7 -72056767 AK021688 7q11.23 Hs.510927 5

methyltransferase activity

transferase activity

 
223050_s_at -0.355 7.869 -2.619 1.917e-02 0.277 -3.267 FBXW5 F-box and WD repeat domain containing 5 9 -138954707 BC000850 9q34.3 Hs.522507 12

protein binding

modification-dependent protein catabolic process

 
203165_s_at -0.306 3.555 -2.619 1.917e-02 0.277 -3.267 SLC33A1 solute carrier family 33 (acetyl-CoA transporter), member 1 3 -157028064 NM_004733 3q25.31 Hs.478031 5

membrane fraction

endoplasmic reticulum

endoplasmic reticulum membrane

integral to plasma membrane

transport

cell death

acetyl-CoA transporter activity

membrane

Glycosphingolipid biosynthesis - ganglio series

Metabolic pathways

223981_at -0.479 4.197 -2.619 1.917e-02 0.277 -3.268 NIN ninein (GSK3B interacting protein) 14 -50263700, -50262296, -50262296, -50256230 AF223937 14q22.1 Hs.310429 23

nucleotide binding

protein binding

GTP binding

centrosome

microtubule

centrosome localization

 
1552362_a_at 0.316 6.237 2.619 1.918e-02 0.277 -3.268 LEAP2 liver expressed antimicrobial peptide 2 5 132237256 NM_052971 5q31.1 Hs.337588 3

extracellular region

defense response to bacterium

 
1552790_a_at -0.529 6.847 -2.619 1.919e-02 0.277 -3.268 SEC62 SEC62 homolog (S. cerevisiae) 3 171167273 NM_153039 3q26.2 Hs.622596 10

receptor activity

endoplasmic reticulum

cytoskeleton

cotranslational protein targeting to membrane

protein transporter activity

protein transport

membrane

integral to membrane

intracellular protein transmembrane transport

 
213666_at 0.384 4.713 2.619 1.919e-02 0.277 -3.268 SEPT6 septin 6 X -118634936, -118633715 AK026589 Xq24 Hs.496666 22

nucleotide binding

cytokinesis

protein binding

protein binding

GTP binding

cellular_component

cell cycle

septin complex

 
222498_at -0.354 6.641 -2.618 1.924e-02 0.278 -3.271 AZI2 5-azacytidine induced 2 3 -28348183, -28338850 AI809206 3p24.1 Hs.706676 12

cytoplasm

RIG-I-like receptor signaling pathway

220626_at 0.293 5.919 2.617 1.924e-02 0.278 -3.271 SERPINA10 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10 14 -93819402, -93819402 NM_016186 14q32.13 Hs.118620 15

serine-type endopeptidase inhibitor activity

extracellular region

peptidase inhibitor activity

 
230486_at 0.273 5.833 2.617 1.925e-02 0.278 -3.271 PCBP3 poly(rC) binding protein 3 21 46094302 BG025371 21q22.3 Hs.474049 11

DNA binding

RNA binding

nucleus

cytoplasm

cytosol

mRNA metabolic process

ribonucleoprotein complex

 
225402_at -0.547 4.989 -2.617 1.925e-02 0.278 -3.271 TP53RK TP53 regulating kinase 20 -44746410 BG339450 20q13.2 Hs.440263 12

nucleotide binding

p53 binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

ATP binding

nucleus

protein amino acid phosphorylation

transferase activity

 
204587_at -0.376 5.974 -2.617 1.926e-02 0.278 -3.271 SLC25A14 solute carrier family 25 (mitochondrial carrier, brain), member 14 X 129301727 NM_003951 Xq24 Hs.194686 13

binding

mitochondrion

mitochondrial inner membrane

integral to plasma membrane

transport

mitochondrial transport

aerobic respiration

membrane

 
200866_s_at -0.545 8.333 -2.617 1.926e-02 0.278 -3.272 PSAP prosaposin 10 -73246060 M32221 10q21-q22 Hs.523004 Hs.705948 76

extracellular space

lysosome

Golgi apparatus

lipid metabolic process

glycosphingolipid metabolic process

lipid transport

enzyme activator activity

lipid binding

integral to membrane

Lysosome

207131_x_at 0.443 5.201 2.617 1.926e-02 0.278 -3.272 GGT1 gamma-glutamyltransferase 1 22 23309717, 23329179, 23333654 NM_013430 22q11.23 Hs.595809 Hs.645535 71

molecular_function

gamma-glutamyltransferase activity

protein binding

cellular amino acid metabolic process

glutathione biosynthetic process

acyltransferase activity

membrane

integral to membrane

transferase activity

Taurine and hypotaurine metabolism

Selenoamino acid metabolism

Cyanoamino acid metabolism

Glutathione metabolism

Arachidonic acid metabolism

Metabolic pathways

228841_at 0.343 9.869 2.617 1.926e-02 0.278 -3.272 LYRM7 Lyrm7 homolog (mouse) 5 130534539 AW299250 5q23.3 Hs.115467 4    
218516_s_at -0.384 5.423 -2.617 1.928e-02 0.278 -3.272 IMPAD1 inositol monophosphatase domain containing 1 8 -58033041 NM_017813 8q12.1 Hs.716471 4

magnesium ion binding

inositol-1(or 4)-monophosphatase activity

membrane

integral to membrane

hydrolase activity

 
1555754_s_at 0.251 6.985 2.617 1.928e-02 0.278 -3.273 ATN1 atrophin 1 12 6903886, 6907740 Z22814 12p13.31 Hs.143766 46

negative regulation of transcription from RNA polymerase II promoter

transcription corepressor activity

nucleus

cytoplasm

central nervous system development

cell death

toxin metabolic process

protein domain specific binding

toxin receptor binding

 
217724_at -0.312 11.090 -2.616 1.930e-02 0.278 -3.273 SERBP1 SERPINE1 mRNA binding protein 1 1 -67646080 AF131807 1p31 Hs.719078 22

RNA binding

mRNA 3'-UTR binding

protein binding

nucleus

cytoplasm

regulation of mRNA stability

perinuclear region of cytoplasm

 
210532_s_at 0.256 11.689 2.616 1.930e-02 0.278 -3.274 C14orf2 chromosome 14 open reading frame 2 14 -103448377 AF116639 14q32.33 Hs.109052 5

molecular_function

cellular_component

mitochondrion

biological_process

 
222488_s_at -0.317 9.175 -2.616 1.932e-02 0.278 -3.274 DCTN4 dynactin 4 (p62) 5 -150068502, -150068502 BE218028 5q31-q32 Hs.675564 7

nucleus

cytoplasm

centrosome

cytoskeleton

protein N-terminus binding

Huntington's disease

233100_at 0.220 4.684 2.616 1.932e-02 0.278 -3.274 EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 7 36159360 AF150438 7p14.2 Hs.487994 Hs.670591 4

DNA binding

intracellular

DNA repair

 
202593_s_at -0.900 7.613 -2.615 1.932e-02 0.278 -3.274 GDE1 glycerophosphodiester phosphodiesterase 1 16 -19420515 NM_016641 16p12-p11.2 Hs.512607 8

magnesium ion binding

cytoplasm

glycerol metabolic process

lipid metabolic process

glycerophosphodiester phosphodiesterase activity

membrane

integral to membrane

hydrolase activity

glycerophosphoinositol glycerophosphodiesterase activity

Glycerophospholipid metabolism

224663_s_at -0.381 11.620 -2.615 1.933e-02 0.278 -3.275 CFL2 cofilin 2 (muscle) 14 -34249338, -34249338, -34249338 BF576053 14q12 Hs.180141 20

actin binding

protein binding

intracellular

nucleus

cytoplasm

cytoskeleton

nuclear matrix

Axon guidance

Fc gamma R-mediated phagocytosis

Regulation of actin cytoskeleton

227038_at -0.697 5.370 -2.615 1.933e-02 0.278 -3.275 SGMS2 sphingomyelin synthase 2 4 108965169, 109033868 AI963083 4q25 Hs.595423 13

Golgi apparatus

plasma membrane

integral to plasma membrane

lipid metabolic process

sphingolipid metabolic process

sphingomyelin biosynthetic process

kinase activity

transferase activity

integral to Golgi membrane

sphingomyelin synthase activity

ceramide cholinephosphotransferase activity

Sphingolipid metabolism

Metabolic pathways

203064_s_at -0.363 6.728 -2.615 1.934e-02 0.278 -3.275 FOXK2 forkhead box K2 17 78070882 NM_004514 17q25 Hs.591140 11

magnesium ion binding

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

sequence-specific DNA binding

 
1554187_at -0.379 4.236 -2.615 1.934e-02 0.278 -3.275 LOC554206 hypothetical LOC554206 16   AK097891 16p12.1 Hs.552959 2    
226251_at -0.420 5.926 -2.614 1.937e-02 0.278 -3.276 ASXL2 additional sex combs like 2 (Drosophila) 2 -25815756 AW295549 2p24.1 Hs.594386 6

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
229027_at -0.938 5.002 -2.614 1.937e-02 0.278 -3.277 PPM1A protein phosphatase 1A (formerly 2C), magnesium-dependent, alpha isoform 14 59782222, 59785718, 59785718 AI241945 14q23.1 Hs.130036 28

magnesium ion binding

protein serine/threonine phosphatase activity

signal transducer activity

cellular_component

membrane fraction

voltage-gated calcium channel complex

protein amino acid dephosphorylation

protein C-terminus binding

protein serine/threonine phosphatase complex

hydrolase activity

manganese ion binding

positive regulation of Wnt receptor signaling pathway

neuron projection

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of transcription, DNA-dependent

MAPK signaling pathway

234980_at -0.958 6.810 -2.614 1.937e-02 0.278 -3.277 TMEM56 transmembrane protein 56 1 95355481 AI004375 1p21.3 Hs.483512 3

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
218436_at -0.236 7.701 -2.614 1.937e-02 0.278 -3.277 SIL1 SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae) 5 -138310308 NM_022464 5q31 Hs.483521 15

binding

endoplasmic reticulum

endoplasmic reticulum lumen

protein folding

unfolded protein binding

intracellular protein transmembrane transport

 
1554396_at 0.377 5.094 2.614 1.938e-02 0.278 -3.277 UEVLD UEV and lactate/malate dehyrogenase domains 11 -18509819 BC011011 11p15.1 Hs.407991 5

binding

glycolysis

metabolic process

protein transport

oxidoreductase activity

oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

small conjugating protein ligase activity

modification-dependent protein catabolic process

post-translational protein modification

cellular carbohydrate metabolic process

regulation of protein metabolic process

 
207335_x_at 0.374 10.749 2.614 1.939e-02 0.278 -3.278 ATP5I ATP synthase, H+ transporting, mitochondrial F0 complex, subunit E 4 -656224 NM_007100 4p16.3 Hs.85539 14

mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)

mitochondrion

ion transport

hydrogen ion transmembrane transporter activity

ATP synthesis coupled proton transport

proton transport

membrane

ATPase activity

Oxidative phosphorylation

Metabolic pathways

217790_s_at -0.661 5.990 -2.613 1.941e-02 0.278 -3.278 SSR3 signal sequence receptor, gamma (translocon-associated protein gamma) 3 -157741236 NM_007107 3q25.31 Hs.518346 7

signal sequence binding

protein binding

endoplasmic reticulum

translocon complex

microsome

cotranslational protein targeting to membrane

membrane

integral to membrane

integral to endoplasmic reticulum membrane

 
234626_at 0.392 5.351 2.613 1.942e-02 0.278 -3.279 OR51I1 olfactory receptor, family 51, subfamily I, member 1 11 -5418375 AF137396 11p15.4 Hs.553732 3

receptor activity

olfactory receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

sensory perception of smell

integral to membrane

response to stimulus

Olfactory transduction

1553265_at 0.287 3.185 2.613 1.942e-02 0.278 -3.279 SLC23A3 solute carrier family 23 (nucleobase transporters), member 3 2 -219734426 NM_144712 2q35 Hs.124565 5

transporter activity

transport

membrane

integral to membrane

 
207993_s_at -0.405 4.787 -2.613 1.943e-02 0.278 -3.279 CHP calcium binding protein P22 15 39310728 NM_007236 15q13.3 Hs.406234 Hs.706184 21

calcium ion binding

cytoplasm

potassium ion transport

small GTPase mediated signal transduction

potassium channel regulator activity

MAPK signaling pathway

Calcium signaling pathway

Apoptosis

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Long-term potentiation

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

214270_s_at -0.441 4.051 -2.613 1.943e-02 0.278 -3.280 MAPRE3 microtubule-associated protein, RP/EB family, member 3 2 27047028 AI885178 2p23.3-p23.1 Hs.515860 13

small GTPase regulator activity

cytoplasm

microtubule

cell cycle

mitosis

microtubule binding

midbody

positive regulation of gene-specific transcription

cell division

 
209654_at -0.488 7.434 -2.613 1.944e-02 0.278 -3.280 KIAA0947 KIAA0947 5 5475806 BC004902 5p15.32 Hs.449296 3    
204344_s_at -0.655 6.373 -2.612 1.945e-02 0.278 -3.280 SEC23A Sec23 homolog A (S. cerevisiae) 14 -38570873 NM_006364 14q21.1 Hs.272927 18

Golgi membrane

protein binding

endoplasmic reticulum

Golgi apparatus

cytosol

intracellular protein transport

ER to Golgi vesicle-mediated transport

ER to Golgi vesicle-mediated transport

zinc ion binding

membrane

membrane organization

vesicle-mediated transport

COPII vesicle coat

perinuclear region of cytoplasm

 
222827_s_at -1.282 11.393 -2.612 1.945e-02 0.278 -3.280 KBTBD10 kelch repeat and BTB (POZ) domain containing 10 2 170074457 AI126808 2q31.1 Hs.50550 8

ruffle

protein binding

nucleus

cytoplasm

cytoskeleton

plasma membrane

focal adhesion

striated muscle contraction

modification-dependent protein catabolic process

pseudopodium

 
209645_s_at -0.697 5.820 -2.612 1.946e-02 0.278 -3.281 ALDH1B1 aldehyde dehydrogenase 1 family, member B1 9 38382701 NM_000692 9p11.1 Hs.436219 15

aldehyde dehydrogenase (NAD) activity

mitochondrion

mitochondrial matrix

carbohydrate metabolic process

oxidoreductase activity

oxidation reduction

Glycolysis / Gluconeogenesis

Ascorbate and aldarate metabolism

Fatty acid metabolism

Valine, leucine and isoleucine degradation

Lysine degradation

Arginine and proline metabolism

Histidine metabolism

Tryptophan metabolism

beta-Alanine metabolism

Glycerolipid metabolism

Pyruvate metabolism

Propanoate metabolism

3-Chloroacrylic acid degradation

Butanoate metabolism

Limonene and pinene degradation

Metabolic pathways

201359_at -0.321 6.933 -2.612 1.946e-02 0.278 -3.281 COPB1 coatomer protein complex, subunit beta 1 11 -14435624, -14435624, -14435624 NM_016451 11p15.2 Hs.339278 46

Golgi membrane

structural molecule activity

protein binding

cytoplasm

Golgi apparatus

Golgi-associated vesicle

cytosol

cytosol

intracellular protein transport

retrograde vesicle-mediated transport, Golgi to ER

intra-Golgi vesicle-mediated transport

membrane

membrane organization

vesicle-mediated transport

membrane coat

COPI vesicle coat

cytoplasmic vesicle

interspecies interaction between organisms

COPI coating of Golgi vesicle

 
238964_at 0.295 5.562 2.611 1.948e-02 0.278 -3.282 FIGN fidgetin 2 -164172363 BE960968 2q24.3 Hs.593650 4

nucleotide binding

ATP binding

nucleoside-triphosphatase activity

 
226470_at -1.072 7.013 -2.611 1.950e-02 0.278 -3.283 GGT7 gamma-glutamyltransferase 7 20 -32896183 AL049709 20q11.22 Hs.433738 9

gamma-glutamyltransferase activity

glutathione biosynthetic process

acyltransferase activity

membrane

integral to membrane

transferase activity

Taurine and hypotaurine metabolism

Selenoamino acid metabolism

Cyanoamino acid metabolism

Glutathione metabolism

Arachidonic acid metabolism

Metabolic pathways

205675_at 0.472 3.212 2.611 1.951e-02 0.278 -3.283 MTTP microsomal triglyceride transfer protein 4 100704262 AI623321 4q24 Hs.195799 93

lipid transporter activity

endoplasmic reticulum

protein amino acid lipidation

lipid metabolic process

triglyceride metabolic process

lipid transport

lipid binding

lipoprotein metabolic process

cholesterol homeostasis

lipoprotein transport

 
235648_at 0.472 4.526 2.610 1.954e-02 0.278 -3.284 ZNF567 zinc finger protein 567 19 41872141 AA742659 19q13.12 Hs.412517 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1554470_s_at -0.707 6.802 -2.610 1.954e-02 0.278 -3.285 ZBTB44 zinc finger and BTB domain containing 44 11 -129601783 BC030580 11q24.3 Hs.719099 7

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
224788_at -0.363 6.984 -2.609 1.957e-02 0.279 -3.286 ARF6 ADP-ribosylation factor 6 14 49429485 AV700721 14q21.3 Hs.525330 Hs.682124 86

nucleotide binding

ruffle

liver development

GTPase activity

protein binding

GTP binding

intracellular

membrane fraction

cytoplasm

endosome

Golgi apparatus

plasma membrane

cell cortex

apoptosis

cell motion

cell adhesion

small GTPase mediated signal transduction

protein transport

vesicle-mediated transport

positive regulation of actin filament polymerization

cortical actin cytoskeleton organization

ruffle organization

regulation of Rac protein signal transduction

negative regulation of receptor-mediated endocytosis

Endocytosis

Fc gamma R-mediated phagocytosis

208674_x_at -0.424 7.250 -2.609 1.957e-02 0.279 -3.286 DDOST dolichyl-diphosphooligosaccharide-protein glycosyltransferase 1 -20850846 BC002594 1p36.1 Hs.523145 12

dolichyl-diphosphooligosaccharide-protein glycotransferase activity

protein binding

endoplasmic reticulum

microsome

protein amino acid terminal N-glycosylation

oligosaccharyltransferase complex

membrane

integral to membrane

transferase activity

protein amino acid N-linked glycosylation via asparagine

response to cytokine stimulus

T cell activation

N-Glycan biosynthesis

Metabolic pathways

237679_at 0.224 4.044 2.609 1.958e-02 0.279 -3.286 TRIM66 tripartite motif-containing 66 11 -8590161 AI632106 11p15.4 Hs.130836 4

protein binding

intracellular

nucleus

zinc ion binding

chromocenter

transcription repressor activity

protein homodimerization activity

negative regulation of transcription, DNA-dependent

metal ion binding

 
204963_at 0.545 9.720 2.608 1.959e-02 0.279 -3.287 SSPN sarcospan (Kras oncogene-associated gene) 12 26239535, 26239772 AL136756 12p11.2 Hs.183428 26

integral to plasma membrane

muscle contraction

cell adhesion

dystrophin-associated glycoprotein complex

cell junction

transport vesicle

sarcolemma

synapse

postsynaptic membrane

 
234519_at 0.295 5.249 2.608 1.962e-02 0.279 -3.288 NOBOX NOBOX oogenesis homeobox 7 -143726971 AC004534 7q35 Hs.558628 9

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

cell differentiation

sequence-specific DNA binding

oogenesis

 
1557347_at 0.222 5.498 2.607 1.965e-02 0.279 -3.289 MCPH1 microcephalin 1 8 6251528 N21605 8p23.1 Hs.709634 32

intracellular

centrosome

 
228578_at -0.376 5.791 -2.607 1.965e-02 0.279 -3.290 RBM45 RNA binding motif protein 45 2 178685427 AI471723 2q31.2 Hs.377257 3

nucleotide binding

RNA binding

nucleus

cytoplasm

multicellular organismal development

nervous system development

cell differentiation

 
218628_at -0.499 8.227 -2.607 1.966e-02 0.279 -3.290 CCDC53 coiled-coil domain containing 53 12 -100930847 NM_016053 12q23.2 Hs.405692 9

molecular_function

protein binding

cellular_component

biological_process

 
216840_s_at -0.510 6.806 -2.607 1.966e-02 0.279 -3.290 LAMA2 laminin, alpha 2 6 129245978 AK026829 6q22-q23 Hs.200841 40

receptor binding

structural molecule activity

extracellular region

basal lamina

laminin-1 complex

muscle organ development

regulation of cell adhesion

regulation of cell migration

positive regulation of synaptic transmission, cholinergic

sarcolemma

regulation of embryonic development

Focal adhesion

ECM-receptor interaction

Pathways in cancer

Small cell lung cancer

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

212005_at -0.347 7.229 -2.606 1.968e-02 0.279 -3.291 C1orf144 chromosome 1 open reading frame 144 1 16566169 AL582808 1p36.13 Hs.252967 2    
209422_at -0.669 7.978 -2.606 1.969e-02 0.279 -3.291 PHF20 PHD finger protein 20 20 33823336 AL109965 20q11.22-q11.23 Hs.517044 11

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
212409_s_at -0.671 5.992 -2.606 1.969e-02 0.279 -3.291 TOR1AIP1 torsin A interacting protein 1 1 178118042 AK021613 1q24.2 Hs.496459 9

nucleus

membrane

integral to membrane

 
222351_at 0.342 5.257 2.605 1.971e-02 0.279 -3.292 PPP2R1B protein phosphatase 2 (formerly 2A), regulatory subunit A, beta isoform 11 -111113814, -111102841 AW009884 11q23.2 Hs.584790 34

antigen binding

protein binding

protein heterodimerization activity

Wnt signaling pathway

TGF-beta signaling pathway

Tight junction

Long-term depression

1570115_at -0.300 2.172 -2.605 1.971e-02 0.279 -3.292 PP12708 hypothetical LOC100130609 7   AF318327 7q34 Hs.684470      
210837_s_at -0.362 2.675 -2.605 1.972e-02 0.279 -3.293 PDE4D phosphodiesterase 4D, cAMP-specific (phosphodiesterase E3 dunce homolog, Drosophila) 5 -58300622, -58300622 AF012074 5q12 Hs.117545 89

3',5'-cyclic-AMP phosphodiesterase activity

soluble fraction

insoluble fraction

cytoplasm

centrosome

cytoskeleton

signal transduction

membrane

hydrolase activity

metal ion binding

Purine metabolism

214789_x_at -0.349 7.334 -2.605 1.973e-02 0.279 -3.293 SFRS2B splicing factor, arginine/serine-rich 2B 11 94439703 AA524274 11q22 Hs.476680 Hs.713908 6

nucleotide binding

RNA binding

nucleus

mRNA processing

RNA splicing

 
203375_s_at -0.394 7.546 -2.604 1.977e-02 0.280 -3.295 TPP2 tripeptidyl peptidase II 13 102047286 NM_003291 13q32-q33 Hs.432424 23

aminopeptidase activity

serine-type endopeptidase activity

cytoplasm

proteolysis

peptidase activity

tripeptidyl-peptidase activity

 
204943_at 0.309 5.669 2.604 1.977e-02 0.280 -3.295 ADAM12 ADAM metallopeptidase domain 12 10 -127719902, -127692894 NM_021641 10q26.3 Hs.594537 59

metalloendopeptidase activity

protein binding

extracellular region

plasma membrane

proteolysis

cell adhesion

myoblast fusion

peptidase activity

zinc ion binding

integral to membrane

SH3 domain binding

metal ion binding

 
221023_s_at 0.219 6.310 2.604 1.978e-02 0.280 -3.295 KCNH6 potassium voltage-gated channel, subfamily H (eag-related), member 6 17 58954426, 58954426 NM_030779 17q23.3 Hs.591177 6

voltage-gated ion channel activity

voltage-gated potassium channel activity

regulation of transcription, DNA-dependent

ion transport

potassium ion transport

signal transduction

membrane

integral to membrane

potassium ion binding

 
206890_at 0.280 4.539 2.604 1.978e-02 0.280 -3.295 IL12RB1 interleukin 12 receptor, beta 1 19 -18042371, -18031370 NM_005535 19p13.1 Hs.567294 51

cytokine receptor activity

integral to plasma membrane

cell surface receptor linked signal transduction

positive regulation of cell proliferation

membrane

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

201011_at -0.313 7.229 -2.604 1.979e-02 0.280 -3.296 RPN1 ribophorin I 3 -129821502 NM_002950 3q21.3 Hs.518244 Hs.603636 19

dolichyl-diphosphooligosaccharide-protein glycotransferase activity

protein binding

endoplasmic reticulum

protein amino acid glycosylation

oligosaccharyltransferase complex

membrane

integral to membrane

transferase activity

protein amino acid N-linked glycosylation via asparagine

rough endoplasmic reticulum membrane

melanosome

N-Glycan biosynthesis

Metabolic pathways

227358_at 0.368 5.645 2.603 1.980e-02 0.280 -3.296 ZBTB46 zinc finger and BTB domain containing 46 20 -61846321 Z39566 20q13.33 Hs.585028 5

nucleic acid binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
217359_s_at -0.669 3.700 -2.603 1.981e-02 0.280 -3.297 NCAM1 neural cell adhesion molecule 1 11 112337204, 112337204 M22094 11q23.1 Hs.503878 120

protein binding

extracellular region

plasma membrane

cell adhesion

integral to membrane

anchored to membrane

Cell adhesion molecules (CAMs)

Prion diseases

202165_at -0.876 7.556 -2.603 1.981e-02 0.280 -3.297 PPP1R2 protein phosphatase 1, regulatory (inhibitor) subunit 2 3 -196722511 BF966540 3q29 Hs.535731 Hs.706920 22

protein serine/threonine phosphatase inhibitor activity

protein binding

carbohydrate metabolic process

glycogen metabolic process

generation of precursor metabolites and energy

regulation of signal transduction

regulation of phosphoprotein phosphatase activity

 
212367_at -0.399 7.311 -2.603 1.981e-02 0.280 -3.297 FEM1B fem-1 homolog b (C. elegans) 15 66357194 AI799061 15q22 Hs.362733 9

ubiquitin-protein ligase activity

death receptor binding

death receptor binding

cellular_component

cytoplasm

induction of apoptosis

modification-dependent protein catabolic process

regulation of apoptosis

regulation of ubiquitin-protein ligase activity

 
202261_at -0.496 8.273 -2.603 1.982e-02 0.280 -3.297 VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae) 1 -149415557 NM_005997 1q21 Hs.2430 10

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

chromatin modification

protein complex

regulation of transcription

 
211799_x_at 0.418 8.293 2.603 1.982e-02 0.280 -3.297 HLA-C major histocompatibility complex, class I, C 6 -31344507, -2686290, -2483726 U62824 6p21.3 Hs.654404 Hs.656020 Hs.77961 521

antigen processing and presentation of peptide antigen via MHC class I

extracellular region

plasma membrane

integral to plasma membrane

immune response

immune response

membrane

integral to membrane

antigen processing and presentation

MHC class I receptor activity

MHC class I protein complex

interspecies interaction between organisms

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

201628_s_at -0.346 9.819 -2.603 1.982e-02 0.280 -3.297 RRAGA Ras-related GTP binding A 9 19039371 NM_006570 9p22.1 Hs.432330 10

nucleotide binding

GTP binding

nucleus

cytoplasm

Golgi apparatus

apoptosis

cell death

virus-host interaction

protein homodimerization activity

interspecies interaction between organisms

positive regulation of cytolysis

protein heterodimerization activity

phosphoprotein binding

 
203223_at -0.976 4.860 -2.602 1.986e-02 0.280 -3.299 RABEP1 rabaptin, RAB GTPase binding effector protein 1 17 5126281 NM_004703 17p13.2 Hs.584784 Hs.592121 19

GTPase activator activity

protein binding

cytoplasm

early endosome

endocytosis

apoptosis

membrane fusion

growth factor activity

protein transport

recycling endosome

Endocytosis

206981_at -0.491 7.705 -2.601 1.987e-02 0.280 -3.300 SCN4A sodium channel, voltage-gated, type IV, alpha subunit 17 -59369645 NM_000334 17q23-q25.3 Hs.46038 65

voltage-gated sodium channel complex

voltage-gated ion channel activity

voltage-gated sodium channel activity

ion transport

sodium ion transport

muscle contraction

membrane

sodium ion binding

 
201799_s_at -0.441 6.906 -2.601 1.988e-02 0.280 -3.300 OSBP oxysterol binding protein 11 -59098446 AI927993 11q12-q13 Hs.597091 13

cytoplasm

Golgi apparatus

lipid transport

oxysterol binding

steroid metabolic process

membrane

 
202457_s_at -0.656 9.104 -2.601 1.989e-02 0.280 -3.300 PPP3CA protein phosphatase 3 (formerly 2B), catalytic subunit, alpha isoform 4 -102163609 AA911231 4q21-q24 Hs.435512 59

protein serine/threonine phosphatase activity

iron ion binding

calcium ion binding

calmodulin binding

nucleus

cytoplasm

calcineurin complex

protein amino acid dephosphorylation

zinc ion binding

hydrolase activity

MAPK signaling pathway

Calcium signaling pathway

Apoptosis

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Long-term potentiation

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

238798_at -0.512 4.930 -2.601 1.989e-02 0.280 -3.300 TAPT1 transmembrane anterior posterior transformation 1 4 -15771225 AA811306 4p15.32 Hs.479223 5

receptor activity

multicellular organismal development

membrane

integral to membrane

 
219799_s_at 0.361 4.808 2.601 1.990e-02 0.280 -3.301 DHRS9 dehydrogenase/reductase (SDR family) member 9 2 169629544, 169631790, 169637330, 169645862 NM_005771 2q31.1 Hs.179608 11

alcohol dehydrogenase (NAD) activity

alcohol dehydrogenase (NAD) activity

retinol dehydrogenase activity

retinol dehydrogenase activity

binding

endoplasmic reticulum

endoplasmic reticulum membrane

microsome

microsome

androgen metabolic process

membrane

oxidoreductase activity

racemase and epimerase activity

integral to endoplasmic reticulum membrane

integral to endoplasmic reticulum membrane

epithelial cell differentiation

progesterone metabolic process

retinol metabolic process

9-cis-retinoic acid biosynthetic process

9-cis-retinoic acid biosynthetic process

3-alpha(17-beta)-hydroxysteroid dehydrogenase (NAD+) activity

3-alpha(17-beta)-hydroxysteroid dehydrogenase (NAD+) activity

oxidation reduction

Retinol metabolism

Metabolic pathways

202565_s_at -0.443 11.809 -2.601 1.991e-02 0.280 -3.301 SVIL supervillin 10 -29786282, -29786282 NM_003174 10p11.2 Hs.499209 23

podosome

calcium ion binding

nucleus

cytoplasm

plasma membrane

cytoskeleton organization

skeletal muscle tissue development

cell projection

costamere

actin filament binding

 
210373_at 0.297 5.954 2.599 1.996e-02 0.281 -3.304 TUSC4 tumor suppressor candidate 4 3 -50359922 AF040708 3p21.3 Hs.437083 11

protein kinase activity

protein binding

negative regulation of kinase activity

 
213320_at -0.518 5.994 -2.599 1.997e-02 0.281 -3.304 PRMT3 protein arginine methyltransferase 3 11 20365651 AL551971 11p15.1 Hs.152337 10

protein binding

intracellular

cytoplasm

cytosol

ribosome

protein amino acid methylation

metabolic process

methyltransferase activity

zinc ion binding

protein-arginine N-methyltransferase activity

transferase activity

metal ion binding

 
209047_at 0.490 8.788 2.598 2.003e-02 0.281 -3.307 AQP1 aquaporin 1 (Colton blood group) 7 30917992 AL518391 7p14 Hs.76152 100

transporter activity

protein binding

integral to plasma membrane

transport

water transport

excretion

water channel activity

carbon dioxide transport

ammonium transport

membrane

basolateral plasma membrane

apical plasma membrane

ammonia transporter activity

 
223305_at 0.292 5.925 2.596 2.008e-02 0.282 -3.309 TMEM216 transmembrane protein 216 11 60916440 AF151078 11q13.1 Hs.26745 3

membrane

integral to membrane

 
210610_at 0.265 5.710 2.596 2.008e-02 0.282 -3.309 CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 19 -47703297 M69176 19q13.2 Hs.512682 97

angiogenesis

molecular_function

extracellular region

membrane fraction

plasma membrane

plasma membrane

integral to plasma membrane

homophilic cell adhesion

integrin-mediated signaling pathway

cell migration

 
232067_at 0.399 3.182 2.596 2.009e-02 0.282 -3.309 C6orf168 chromosome 6 open reading frame 168 6 -99827513 BC004869 6q16.2 Hs.573245 5

mitochondrial outer membrane

protein targeting to mitochondrion

 
213887_s_at -0.360 8.572 -2.596 2.010e-02 0.282 -3.310 POLR2E polymerase (RNA) II (DNA directed) polypeptide E, 25kDa 19 -1037577 AI554759 19p13.3 Hs.24301 91

nuclear mRNA splicing, via spliceosome

DNA binding

DNA-directed RNA polymerase activity

protein binding

nucleus

nucleoplasm

DNA-directed RNA polymerase II, core complex

transcription

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

interspecies interaction between organisms

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

Huntington's disease

242528_at 0.256 3.103 2.596 2.010e-02 0.282 -3.310 LOC285943 hypothetical protein LOC285943 7   AI473887 7p15.2 Hs.714774 1    
227250_at -0.761 6.666 -2.596 2.010e-02 0.282 -3.310 KREMEN1 kringle containing transmembrane protein 1 22 27799065, 27799105 BF221745 22q12.1 Hs.229335 11

molecular_function

membrane fraction

cell communication

membrane

integral to membrane

Wnt receptor signaling pathway

 
227777_at -0.527 6.772 -2.596 2.011e-02 0.282 -3.310 C10orf18 chromosome 10 open reading frame 18 10 5766806 BF223040 10p15.1 Hs.699500 4    
219572_at 0.284 5.622 2.595 2.011e-02 0.282 -3.310 CADPS2 Ca++-dependent secretion activator 2 7 -121745713 NM_017954 7q31.3 Hs.708214 12

calcium ion binding

exocytosis

lipid binding

protein transport

membrane

cell junction

cytoplasmic vesicle

synapse

 
1553587_a_at -0.529 7.607 -2.595 2.012e-02 0.282 -3.311 POLE4 polymerase (DNA-directed), epsilon 4 (p12 subunit) 2 75039282 NM_019896 2p12 Hs.469060 5

DNA-directed DNA polymerase activity

protein binding

intracellular

nucleus

transferase activity

nucleotidyltransferase activity

sequence-specific DNA binding

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

DNA replication

Base excision repair

Nucleotide excision repair

1558954_at 0.315 5.816 2.595 2.013e-02 0.282 -3.311 SNORA78 small nucleolar RNA, H/ACA box 78 16 1955185 BC028232 16p13.3 Hs.707294 2    
37950_at -0.431 7.856 -2.595 2.013e-02 0.282 -3.311 PREP prolyl endopeptidase 6 -105832198 X74496 6q22 Hs.436564 26

serine-type endopeptidase activity

cytoplasm

proteolysis

peptidase activity

 
221526_x_at -0.492 7.257 -2.595 2.014e-02 0.282 -3.311 PARD3 par-3 partitioning defective 3 homolog (C. elegans) 10 -34440102 AW452651 10p11.21 Hs.131489 40

protein binding

cytoplasm

plasma membrane

tight junction

tight junction

cell cortex

protein complex assembly

cell cycle

establishment or maintenance of cell polarity

activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway

axonogenesis

asymmetric cell division

cell junction

Chemokine signaling pathway

Neuroactive ligand-receptor interaction

Endocytosis

Adherens junction

Tight junction

229585_at 0.259 3.407 2.595 2.014e-02 0.282 -3.312 ADAMTSL1 ADAMTS-like 1 9 18464103, 18464103 AI803088 9p22.2-p22.1 Hs.522019 10

extracellular region

proteinaceous extracellular matrix

peptidase activity

metallopeptidase activity

zinc ion binding

 
1553997_a_at 0.299 4.896 2.595 2.015e-02 0.282 -3.312 ASPHD1 aspartate beta-hydroxylase domain containing 1 16 29819647 BC034275 16p11.2 Hs.655761 4

peptide-aspartate beta-dioxygenase activity

membrane

integral to membrane

oxidoreductase activity

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

peptidyl-amino acid modification

integral to endoplasmic reticulum membrane

oxidation reduction

 
243582_at -1.092 6.632 -2.594 2.016e-02 0.282 -3.312 SH3RF2 SH3 domain containing ring finger 2 5 145296318 AW082633 5q32 Hs.443728 4

protein binding

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
204964_s_at 0.771 8.973 2.594 2.016e-02 0.282 -3.312 SSPN sarcospan (Kras oncogene-associated gene) 12 26239535, 26239772 NM_005086 12p11.2 Hs.183428 26

integral to plasma membrane

muscle contraction

cell adhesion

dystrophin-associated glycoprotein complex

cell junction

transport vesicle

sarcolemma

synapse

postsynaptic membrane

 
221732_at 0.340 7.107 2.594 2.016e-02 0.282 -3.312 CANT1 calcium activated nucleotidase 1 17 -74499392 AK026161 17q25.3 Hs.8859 13

signal transducer activity

calcium ion binding

endoplasmic reticulum

Golgi apparatus

membrane

integral to membrane

hydrolase activity

nucleoside-diphosphatase activity

positive regulation of I-kappaB kinase/NF-kappaB cascade

Purine metabolism

Pyrimidine metabolism

209522_s_at 0.493 9.483 2.594 2.017e-02 0.282 -3.313 CRAT carnitine acetyltransferase 9 -130896895, -130896893 BC000723 9q34.1 Hs.12068 10

carnitine O-acetyltransferase activity

mitochondrion

mitochondrial inner membrane

peroxisome

endoplasmic reticulum

lipid metabolic process

fatty acid metabolic process

transport

acyltransferase activity

energy derivation by oxidation of organic compounds

membrane

transferase activity

 
215880_at -0.274 4.811 -2.594 2.017e-02 0.282 -3.313 NAGLU N-acetylglucosaminidase, alpha- 17 37941476 AI364950 17q21 Hs.50727 21

alpha-N-acetylglucosaminidase activity

lysosome

nervous system development

metabolic process

hydrolase activity, acting on glycosyl bonds

glycosaminoglycan metabolic process

Glycosaminoglycan degradation

Metabolic pathways

Lysosome

201784_s_at -0.237 9.168 -2.594 2.018e-02 0.282 -3.313 C11orf58 chromosome 11 open reading frame 58 11 16716723 NM_014267 11p15.1 Hs.719128 8

molecular_function

cellular_component

biological_process

 
201088_at -0.759 7.145 -2.593 2.020e-02 0.282 -3.314 KPNA2 karyopherin alpha 2 (RAG cohort 1, importin alpha 1) 17 63462309, -1713110 NM_002266 17q24.2 Hs.594238 125

regulation of DNA recombination

M phase specific microtubule process

G2 phase of mitotic cell cycle

protein binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

DNA metabolic process

NLS-bearing substrate import into nucleus

intracellular protein transport

nuclear localization sequence binding

protein transporter activity

interspecies interaction between organisms

 
214730_s_at -0.561 7.467 -2.593 2.020e-02 0.282 -3.314 GLG1 golgi apparatus protein 1 16 -73038828 AK025457 16q22.3 Hs.109731 17

Golgi membrane

receptor binding

Golgi apparatus

membrane

integral to membrane

Cell adhesion molecules (CAMs)

211058_x_at -0.599 10.584 -2.593 2.023e-02 0.282 -3.315 TUBA1B tubulin, alpha 1b 12 -47807832 BC006379 12q13.12 Hs.524390 Hs.719075 42

nucleotide binding

microtubule cytoskeleton organization

GTPase activity

structural constituent of cytoskeleton

protein binding

GTP binding

microtubule

microtubule-based movement

protein complex

protein polymerization

Gap junction

Pathogenic Escherichia coli infection - EHEC

240444_x_at -0.224 4.924 -2.592 2.023e-02 0.282 -3.316 CLIP1 CAP-GLY domain containing linker protein 1 12 -121321933 AA868722 12q24.3 Hs.524809 37

kinetochore

nucleic acid binding

protein binding

cytoplasm

endosome

microtubule

intermediate filament

mitosis

microtubule binding

zinc ion binding

protein homodimerization activity

metal ion binding

 
222942_s_at -0.696 5.655 -2.592 2.024e-02 0.282 -3.316 TIAM2 T-cell lymphoma invasion and metastasis 2 6 155453114, 155579788 AI094945 6q25.2 Hs.586279 5

receptor signaling protein activity

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

protein binding

intracellular

cytoplasm

intracellular signaling cascade

lamellipodium

filopodium

growth cone

regulation of Rho protein signal transduction

Chemokine signaling pathway

Regulation of actin cytoskeleton

62987_r_at 0.276 8.982 2.592 2.025e-02 0.282 -3.317 CACNG4 calcium channel, voltage-dependent, gamma subunit 4 17 62391474 AI675178 17q24 Hs.514423 9

voltage-gated ion channel activity

voltage-gated calcium channel activity

calcium ion binding

plasma membrane

integral to plasma membrane

ion transport

calcium ion transport

transmission of nerve impulse

MAPK signaling pathway

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

212017_at -0.283 8.302 -2.592 2.026e-02 0.282 -3.317 FAM168B family with sequence similarity 168, member B 2 -131521918 BF677404 2q21.1 Hs.534679 2    
228095_at -0.388 6.351 -2.592 2.026e-02 0.282 -3.317 PHF14 PHD finger protein 14 7 10980040, 10980040 AA608749 7p21.3 Hs.655688 7

protein binding

zinc ion binding

metal ion binding

 
1553262_a_at 0.282 6.284 2.591 2.027e-02 0.282 -3.317 UTS2R urotensin 2 receptor 17 77925489 NM_018949 17q25.3 Hs.192720 21

urotensin II receptor activity

receptor activity

G-protein coupled receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

blood circulation

integral to membrane

Neuroactive ligand-receptor interaction

219872_at 0.290 2.966 2.591 2.027e-02 0.282 -3.317 C4orf18 chromosome 4 open reading frame 18 4 -159265181, -159265181 NM_016613 4q32.1 Hs.567498 9

Golgi apparatus

membrane

integral to membrane

 
213271_s_at -0.329 6.951 -2.591 2.028e-02 0.282 -3.318 DOPEY1 dopey family member 1 6 83834103 AB029040 6q15 Hs.520246 Hs.708998 6

protein transport

 
224415_s_at 0.379 9.434 2.591 2.028e-02 0.282 -3.318 HINT2 histidine triad nucleotide binding protein 2 9 -35802956 AF356515 9p13.3 Hs.70573 6

extracellular region

mitochondrion

hydrolase activity

 
1558703_at 0.393 5.409 2.591 2.029e-02 0.282 -3.318 SLC46A1 solute carrier family 46 (folate transporter), member 1 17 -23745787 AL832613 17q11.2 Hs.446689 22

folic acid binding

cytoplasm

plasma membrane

transport

folic acid transporter activity

folic acid transport

integral to membrane

apical plasma membrane

 
202519_at -0.449 9.261 -2.591 2.029e-02 0.282 -3.318 MLXIP MLX interacting protein 12 121001142 NM_014938 12q24.31 Hs.437153 7

DNA binding

nucleus

cytoplasm

mitochondrion

mitochondrial outer membrane

membrane

transcription regulator activity

regulation of transcription

 
200912_s_at -0.312 12.291 -2.591 2.029e-02 0.282 -3.318 EIF4A2 eukaryotic translation initiation factor 4A, isoform 2 3 187984054 NM_001967 3q28 Hs.518475 Hs.599481 15

nucleotide binding

RNA binding

translation initiation factor activity

helicase activity

protein binding

ATP binding

cytosol

translation

regulation of translational initiation

ATP-dependent helicase activity

eukaryotic translation initiation factor 4F complex

hydrolase activity

interspecies interaction between organisms

 
215705_at 0.332 5.818 2.591 2.031e-02 0.282 -3.319 PPP5C protein phosphatase 5, catalytic subunit 19 51542133 BC000750 19q13.3 Hs.654604 39

protein serine/threonine phosphatase activity

signal transducer activity

iron ion binding

protein binding

nucleus

cytoplasm

transcription

protein amino acid dephosphorylation

mitosis

hydrolase activity

manganese ion binding

positive regulation of I-kappaB kinase/NF-kappaB cascade

metal ion binding

MAPK signaling pathway

215022_x_at -0.457 3.269 -2.590 2.032e-02 0.282 -3.319 ZNF33B zinc finger protein 33B 10 -42404560 BG429214 10q11.2 Hs.499453 9

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
222826_at -0.542 6.780 -2.590 2.034e-02 0.282 -3.320 PLDN pallidin homolog (mouse) 15 43666708 BC004819 15q21.1 Hs.719102 17

cellular_component

cytoplasm

endosome

membrane fusion

blood coagulation

membrane

synaptic vesicle docking during exocytosis

melanocyte differentiation

syntaxin-13 binding

positive regulation of natural killer cell activation

secretion of lysosomal enzymes

identical protein binding

pigmentation

 
205741_s_at 0.392 9.024 2.589 2.036e-02 0.282 -3.321 DTNA dystrobrevin, alpha 18 30327251, 30327251, 30327251, 30427279, 30544193, 30589937, 30589937, 30652299, 30652299 NM_001392 18q12 Hs.643454 38

calcium ion binding

protein binding

cytoplasm

striated muscle contraction

signal transduction

neuromuscular synaptic transmission

zinc ion binding

cell junction

synapse

 
1555864_s_at 0.300 10.969 2.589 2.037e-02 0.282 -3.321 PDHA1 pyruvate dehydrogenase (lipoamide) alpha 1 X 19271931 AW057819 Xp22.2-p22.1 Hs.530331 54

pyruvate dehydrogenase (acetyl-transferring) activity

protein binding

mitochondrion

mitochondrial matrix

glycolysis

oxidoreductase activity

oxidation reduction

Glycolysis / Gluconeogenesis

Citrate cycle (TCA cycle)

Valine, leucine and isoleucine biosynthesis

Pyruvate metabolism

Butanoate metabolism

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

216306_x_at -0.374 6.896 -2.588 2.040e-02 0.283 -3.323 PTBP1 polypyrimidine tract binding protein 1 19 748391 X62006 19p13.3 Hs.172550 65

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

nucleoplasm

nucleolus

poly-pyrimidine tract binding

RNA splicing

heterogeneous nuclear ribonucleoprotein complex

 
1569737_a_at 0.305 4.489 2.588 2.040e-02 0.283 -3.323 CASKIN1 CASK interacting protein 1 16 -2167184 BC042011 16p13.3 Hs.643537 3

protein binding

cytoplasm

signal transduction

 
202479_s_at -0.482 5.774 -2.588 2.041e-02 0.283 -3.324 TRIB2 tribbles homolog 2 (Drosophila) 2 12774448, 12774448 BC002637 2p24.3 Hs.467751 16

nucleotide binding

protein kinase activity

protein kinase inhibitor activity

protein binding

ATP binding

cytoplasm

cytoskeleton

protein amino acid phosphorylation

regulation of MAP kinase activity

 
233496_s_at -0.464 10.678 -2.588 2.042e-02 0.283 -3.324 CFL2 cofilin 2 (muscle) 14 -34249338, -34249338, -34249338 AV726166 14q12 Hs.180141 20

actin binding

protein binding

intracellular

nucleus

cytoplasm

cytoskeleton

nuclear matrix

Axon guidance

Fc gamma R-mediated phagocytosis

Regulation of actin cytoskeleton

1554631_at 0.295 5.793 2.588 2.043e-02 0.283 -3.324 ATM ataxia telangiectasia mutated 11 107598768, 107663328 BC007023 11q22-q23 Hs.367437 504

nucleotide binding

DNA binding

protein serine/threonine kinase activity

ATP binding

nucleus

nucleoplasm

DNA repair

response to DNA damage stimulus

cell cycle

mitotic cell cycle spindle assembly checkpoint

reciprocal meiotic recombination

signal transduction

cell death

response to ionizing radiation

1-phosphatidylinositol-3-kinase activity

transferase activity

cytoplasmic vesicle

protein N-terminus binding

Cell cycle

p53 signaling pathway

Apoptosis

219867_at 0.477 5.047 2.588 2.043e-02 0.283 -3.324 CHODL chondrolectin 21 18539020 NM_024944 21q11.2 Hs.283725 9

binding

sugar binding

hyaluronic acid binding

muscle organ development

membrane

integral to membrane

perinuclear region of cytoplasm

 
207309_at 0.361 5.567 2.586 2.049e-02 0.283 -3.327 NOS1 nitric oxide synthase 1 (neuronal) 12 -116135361 NM_000620 12q24.2-q24.31 Hs.654410 188

response to hypoxia

photoreceptor inner segment

nitric-oxide synthase activity

calmodulin binding

cytoplasm

cytoskeleton

arginine catabolic process

nitric oxide biosynthetic process

myoblast fusion

electron carrier activity

response to heat

FMN binding

negative regulation of calcium ion transport into cytosol

oxidoreductase activity

sarcoplasmic reticulum

heme binding

multicellular organismal response to stress

tetrahydrobiopterin binding

arginine binding

neurotransmitter biosynthetic process

sarcolemma

cell projection

dendritic spine

positive regulation of vasodilation

positive regulation of vasodilation

cadmium ion binding

metal ion binding

perinuclear region of cytoplasm

FAD binding

NADP or NADPH binding

oxidation reduction

regulation of cardiac muscle contraction

Arginine and proline metabolism

Metabolic pathways

Calcium signaling pathway

Long-term depression

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

Pathways in cancer

Small cell lung cancer

210988_s_at -0.486 5.587 -2.586 2.051e-02 0.284 -3.328 PRUNE prune homolog (Drosophila) 1 149247596 AF123538 1q21 Hs.78524 8

inorganic diphosphatase activity

protein binding

nucleus

cytoplasm

focal adhesion

hydrolase activity

cell junction

manganese ion binding

metal ion binding

Purine metabolism

201712_s_at -0.401 6.737 -2.585 2.055e-02 0.284 -3.329 RANBP2 RAN binding protein 2 2 108702368 NM_006267 2q12.3 Hs.199561 Hs.715056 61

peptidyl-prolyl cis-trans isomerase activity

protein binding

intracellular

nucleus

nuclear pore

cytosol

protein folding

protein import into nucleus

zinc ion binding

Ran GTPase binding

protein transport

isomerase activity

modification-dependent protein catabolic process

metal ion binding

intracellular transport

mRNA transport

intracellular protein transmembrane transport

 
214118_x_at -0.300 8.593 -2.585 2.055e-02 0.284 -3.329 PCM1 pericentriolar material 1 8 17824645 AI205598 8p22-p21.3 Hs.491148 36

pericentriolar material

protein binding

cytoplasm

cytoskeleton

nonmotile primary cilium

centriolar satellite

cilium assembly

cilium assembly

centrosome organization

 
216008_s_at -0.345 7.424 -2.585 2.055e-02 0.284 -3.330 ARIH2 ariadne homolog 2 (Drosophila) 3 48931284 AV694434 3p21.2-p21.3 Hs.633601 14

nucleic acid binding

protein binding

nucleus

ubiquitin-dependent protein catabolic process

multicellular organismal development

zinc ion binding

metal ion binding

 
205910_s_at 0.305 2.909 2.584 2.057e-02 0.284 -3.330 CEL carboxyl ester lipase (bile salt-stimulated lipase) 9 134927185 NM_001807 9q34.3 Hs.533258 51

sterol esterase activity

sterol esterase activity

triacylglycerol lipase activity

extracellular region

cytoplasm

triglyceride metabolic process

cholesterol catabolic process

cholesterol catabolic process

heparin binding

fatty acid catabolic process

lipid catabolic process

hydrolase activity

protein amino acid esterification

pancreatic juice secretion

intestinal cholesterol absorption

intestinal lipid catabolic process

acylglycerol lipase activity

Steroid biosynthesis

Glycerolipid metabolism

Metabolic pathways

222701_s_at 0.378 7.226 2.584 2.057e-02 0.284 -3.330 CHCHD7 coiled-coil-helix-coiled-coil-helix domain containing 7 8 57286868 AA570393 8q12.1 Hs.436913 9    
209217_s_at -0.322 7.422 -2.584 2.059e-02 0.284 -3.331 WDR45 WD repeat domain 45 X -48819035, -48819035 BC000464 Xp11.23 Hs.632807 8    
244783_at -0.292 2.576 -2.584 2.059e-02 0.284 -3.331 YAF2 YY1 associated factor 2 12 -40837173 R56794 12q12 Hs.708084 9

transcription coactivator activity

transcription corepressor activity

protein binding

intracellular

nucleus

zinc ion binding

negative regulation of transcription

positive regulation of transcription

metal ion binding

 
221058_s_at 0.324 5.747 2.583 2.061e-02 0.284 -3.332 CKLF chemokine-like factor 16 65143966, 65143972 NM_016326 16q21 Hs.15159 Hs.710181 12

extracellular region

extracellular space

chemotaxis

chemokine activity

cell proliferation

membrane

integral to membrane

neutrophil chemotaxis

secretion by cell

macrophage chemotaxis

lymphocyte chemotaxis

 
1555567_s_at -0.557 7.832 -2.583 2.062e-02 0.284 -3.332 LMOD3 leiomodin 3 (fetal) 3 -69238728 BC039202 3p14.1 Hs.350621 9

tropomyosin binding

cytoplasm

cytoskeleton

 
230430_at 0.223 5.452 2.582 2.064e-02 0.284 -3.334 ENTPD2 ectonucleoside triphosphate diphosphohydrolase 2 9 -139062373 AW134837 9q34 Hs.123036 14

magnesium ion binding

calcium ion binding

membrane

integral to membrane

hydrolase activity

Purine metabolism

209944_at -0.287 7.678 -2.582 2.066e-02 0.284 -3.334 ZNF410 zinc finger protein 410 14 73423338 BC000330 14q24.3 Hs.270869 9

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
53720_at 0.382 6.198 2.582 2.066e-02 0.284 -3.334 C19orf66 chromosome 19 open reading frame 66 19 10057805 AI862559 19p13.2 Hs.655613 2    
1561928_s_at 0.280 5.156 2.581 2.069e-02 0.285 -3.335 C3orf16 chromosome 3 open reading frame 16 3 -150961581 AK027233 3q25.1 Hs.665988 3    
204969_s_at -0.607 5.074 -2.581 2.069e-02 0.285 -3.336 RDX radixin 11 -109605375 NM_002906 11q23 Hs.263671 Hs.592679 46

ruffle

actin binding

cytoplasm

cytoskeleton

plasma membrane

extrinsic to membrane

lamellipodium

microvillus assembly

filopodium

stereocilium

apical protein localization

apical part of cell

actin filament capping

Regulation of actin cytoskeleton

231416_at 0.286 5.398 2.581 2.071e-02 0.285 -3.337 DHDH dihydrodiol dehydrogenase (dimeric) 19 54128750 NM_014475 19q13.3 Hs.631555 6

binding

carbohydrate metabolic process

NAD(P) transhydrogenase activity

electron carrier activity

oxidoreductase activity

trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity

D-xylose 1-dehydrogenase (NADP+) activity

oxidation reduction

Metabolism of xenobiotics by cytochrome P450

206611_at 0.352 6.200 2.580 2.073e-02 0.285 -3.337 C2orf27A chromosome 2 open reading frame 27A 2 132196533 NM_013310 2q21.1-q21.2 Hs.635289 Hs.655680 5    
207040_s_at -0.422 10.356 -2.580 2.075e-02 0.285 -3.338 ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) 22 -39550546 NM_003932 22q13.2 Hs.712713 29

binding

cytoplasm

protein folding

protein binding, bridging

 
223331_s_at -0.307 6.417 -2.580 2.075e-02 0.285 -3.338 DDX20 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 1 112099776 AF106019 1p21.1-p13.2 Hs.591405 30

negative regulation of transcription from RNA polymerase II promoter

nucleotide binding

assembly of spliceosomal tri-snRNP

DNA binding

ATP-dependent RNA helicase activity

helicase activity

protein binding

ATP binding

nucleus

nucleoplasm

spliceosomal complex

cytoplasm

cytosol

cytoskeleton

mRNA processing

induction of apoptosis

RNA splicing

Cajal body

transcription repressor activity

hydrolase activity

transcriptional repressor complex

 
232124_at 0.352 3.430 2.580 2.076e-02 0.285 -3.338 LOC729085 hypothetical protein LOC729085 3 42995762 AL117530 3p22.1 Hs.146346 2    
206082_at 0.566 5.129 2.579 2.078e-02 0.285 -3.339 HCP5 HLA complex P5 6 31538935, 2877117 NM_006674 6p21.3 Hs.654480 12

defense response

 
212795_at -0.771 7.536 -2.579 2.080e-02 0.285 -3.340 KIAA1033 KIAA1033 12 104025621 AL137753 12q24.11 Hs.12144 4    
1554086_at 0.269 4.579 2.579 2.080e-02 0.285 -3.340 TUBGCP3 tubulin, gamma complex associated protein 3 13 -112187328 BC007763 13q34 Hs.224152 8

structural constituent of cytoskeleton

protein binding

cytoplasm

centriole

polar microtubule

microtubule

microtubule nucleation

gamma-tubulin binding

 
219090_at -0.982 7.810 -2.578 2.080e-02 0.285 -3.340 SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 20 19141289 NM_020689 20p13 Hs.654790 2

calcium ion binding

ion transport

potassium ion transport

sodium ion transport

calcium ion transport

calcium, potassium:sodium antiporter activity

symporter activity

antiporter activity

membrane

integral to membrane

potassium ion binding

sodium ion binding

 
230264_s_at -0.493 9.723 -2.578 2.083e-02 0.285 -3.341 AP1S2 adaptor-related protein complex 1, sigma 2 subunit X -15753849 AA551090 Xp22.2 Hs.653504 Hs.656471 21

protein binding

Golgi apparatus

cytosol

coated pit

intracellular protein transport

endocytosis

protein transporter activity

membrane

clathrin coat of trans-Golgi network vesicle

clathrin adaptor complex

cytoplasmic vesicle

Lysosome

235129_at 0.534 8.734 2.578 2.083e-02 0.285 -3.342 PPP1R1A protein phosphatase 1, regulatory (inhibitor) subunit 1A 12 -53259290 BF510098 12q13.2 Hs.505662 9

protein serine/threonine phosphatase inhibitor activity

protein binding

carbohydrate metabolic process

glycogen metabolic process

signal transduction

Long-term potentiation

222036_s_at 0.509 6.817 2.577 2.086e-02 0.286 -3.343 MCM4 minichromosome maintenance complex component 4 8 49036046 AI859865 8q11.2 Hs.460184 47

nucleotide binding

DNA binding

DNA helicase activity

single-stranded DNA binding

protein binding

ATP binding

nucleus

nucleoplasm

nucleolus

DNA replication

DNA replication

DNA unwinding during replication

DNA replication initiation

nucleoside-triphosphatase activity

regulation of transcription

DNA replication

Cell cycle

225026_at -0.413 4.401 -2.577 2.086e-02 0.286 -3.343 CHD6 chromodomain helicase DNA binding protein 6 20 -39464583 BF572029 20q12 Hs.371979 12

nucleotide binding

chromatin

DNA binding

chromatin binding

helicase activity

ATP binding

nucleus

chromatin assembly or disassembly

chromatin remodeling

regulation of transcription, DNA-dependent

nervous system development

ATP-dependent helicase activity

hydrolase activity

 
226994_at -0.471 7.892 -2.577 2.087e-02 0.286 -3.343 DNAJA2 DnaJ (Hsp40) homolog, subfamily A, member 2 16 -45546774 AW057513 16q12.1 Hs.368078 15

protein folding

zinc ion binding

positive regulation of cell proliferation

membrane

heat shock protein binding

metal ion binding

unfolded protein binding

 
202972_s_at -0.449 5.994 -2.577 2.088e-02 0.286 -3.344 FAM13A family with sequence similarity 13, member A 4 -89866128, -89866128 AW450403 4q22.1 Hs.97270 7    
218909_at -0.371 6.987 -2.576 2.089e-02 0.286 -3.344 RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 1 211291210 NM_012424 1q41 Hs.591416 10

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

early endosome

protein amino acid phosphorylation

signal transduction

membrane

transferase activity

phosphoinositide binding

 
1554424_at -0.634 4.846 -2.576 2.090e-02 0.286 -3.344 FIP1L1 FIP1 like 1 (S. cerevisiae) 4 53938576 BC017724 4q12 Hs.624245 28

RNA binding

nucleus

mRNA processing

 
226143_at 0.440 7.538 2.576 2.091e-02 0.286 -3.345 RAI1 retinoic acid induced 1 17 17525511 BF984830 17p11.2 Hs.655395 16

protein binding

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
227277_at -0.481 5.409 -2.576 2.091e-02 0.286 -3.345 MTDH metadherin 8 98725582 BG530089 8q22.1 Hs.377155 23

negative regulation of transcription from RNA polymerase II promoter

protein binding

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

tight junction

membrane

integral to membrane

cell junction

nuclear membrane

perinuclear region of cytoplasm

NF-kappaB binding

positive regulation of NF-kappaB transcription factor activity

 
217800_s_at -0.439 7.775 -2.576 2.091e-02 0.286 -3.345 NDFIP1 Nedd4 family interacting protein 1 5 141468507 NM_030571 5q31.3 Hs.653510 Hs.9788 11

signal transducer activity

protein binding

Golgi apparatus

cellular iron ion homeostasis

negative regulation of gene expression

membrane

integral to membrane

positive regulation of protein ubiquitination

negative regulation of transporter activity

positive regulation of I-kappaB kinase/NF-kappaB cascade

perinuclear region of cytoplasm

negative regulation of protein transport

 
209676_at -0.432 3.430 -2.576 2.092e-02 0.286 -3.346 TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 2 -188051550, -188037202 J03225 2q32 Hs.516578 118

serine-type endopeptidase inhibitor activity

extracellular region

extracellular region

extracellular space

plasma membrane

blood coagulation, extrinsic pathway

Complement and coagulation cascades

243971_x_at 0.495 4.723 2.576 2.092e-02 0.286 -3.346 LOC731789 hypothetical LOC731789 10 26972042 AL042865 10p12.1 Hs.178186 1    
204957_at -0.476 6.275 -2.576 2.092e-02 0.286 -3.346 ORC5L origin recognition complex, subunit 5-like (yeast) 7 -103595859, -103554023 NM_002553 7q22.1 Hs.432948 28

nucleotide binding

DNA replication origin binding

ATP binding

nucleus

nucleoplasm

DNA replication

DNA replication

DNA replication initiation

identical protein binding

Cell cycle

224747_at -0.843 7.213 -2.576 2.093e-02 0.286 -3.346 UBE2Q2 ubiquitin-conjugating enzyme E2Q family member 2 15 73922676, 73923439 AK000617 15q24.2 Hs.23033 4

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

cytoplasm

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

208867_s_at -0.619 6.506 -2.575 2.093e-02 0.286 -3.346 CSNK1A1 casein kinase 1, alpha 1 5 -148855037 AF119911 5q32 Hs.529862 Hs.712555 53

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

cytosol

protein amino acid phosphorylation

Wnt receptor signaling pathway

transferase activity

Wnt signaling pathway

Hedgehog signaling pathway

207692_s_at 0.307 5.141 2.574 2.097e-02 0.286 -3.348 ACAN aggrecan 15 87147677 NM_001135 15q26.1 Hs.2159 Hs.616395 Hs.711491 59

skeletal system development

binding

sugar binding

hyaluronic acid binding

extracellular region

proteinaceous extracellular matrix

proteolysis

cell adhesion

extracellular matrix structural constituent conferring compression resistance

extracellular matrix organization

 
210127_at 0.339 4.139 2.574 2.100e-02 0.286 -3.349 RAB6B RAB6B, member RAS oncogene family 3 -135025769 BC002510 3q22.1 Hs.707804 10

nucleotide binding

GTPase activity

GTP binding

Golgi apparatus

retrograde vesicle-mediated transport, Golgi to ER

small GTPase mediated signal transduction

protein transport

membrane

vesicle-mediated transport

 
209352_s_at 0.269 5.283 2.573 2.102e-02 0.286 -3.349 SIN3B SIN3 homolog B, transcription regulator (yeast) 19 16801217 AB014600 19p13.11 Hs.13999 22

protein binding

nucleus

regulation of transcription, DNA-dependent

 
224857_s_at -0.342 7.320 -2.573 2.102e-02 0.286 -3.350 POLR1D polymerase (RNA) I polypeptide D, 16kDa 13 27094002, 27094028 BE378670 13q12.2 Hs.507584 15

DNA binding

DNA-directed RNA polymerase activity

nucleus

nucleoplasm

transcription

protein dimerization activity

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

214954_at -0.617 2.832 -2.573 2.104e-02 0.286 -3.351 SUSD5 sushi domain containing 5 3 -33166540 BF977837 3p22.3 Hs.196647 2

binding

hyaluronic acid binding

cell adhesion

membrane

integral to membrane

 
227064_at -0.439 9.157 -2.573 2.105e-02 0.286 -3.351 ANKRD40 ankyrin repeat domain 40 17 -46125550 AV712687 17q21.33 Hs.463426 2    
212398_at -0.560 7.399 -2.573 2.105e-02 0.286 -3.351 RDX radixin 11 -109605375 AI057093 11q23 Hs.263671 Hs.592679 46

ruffle

actin binding

cytoplasm

cytoskeleton

plasma membrane

extrinsic to membrane

lamellipodium

microvillus assembly

filopodium

stereocilium

apical protein localization

apical part of cell

actin filament capping

Regulation of actin cytoskeleton

1562540_at 0.323 4.285 2.572 2.106e-02 0.286 -3.351 LOC339978 hypothetical protein LOC339978 4   BC043566 4q12   1    
41512_at -0.543 6.164 -2.572 2.106e-02 0.286 -3.352 BRAP BRCA1 associated protein 12 -110564332 AL042733 12q24 Hs.530940 12

ubiquitin-protein ligase activity

cytoplasm

zinc ion binding

negative regulation of signal transduction

ligase activity

modification-dependent protein catabolic process

identical protein binding

metal ion binding

 
1555216_a_at 0.358 4.941 2.572 2.107e-02 0.286 -3.352 LOC645722 hypothetical LOC645722 17   BC009278 17q23.2        
210162_s_at -0.594 6.271 -2.572 2.108e-02 0.286 -3.352 NFATC1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 18 75256759, 75256759, 75261313 U08015 18q23 Hs.534074 Hs.701518 83

transcription factor activity

FK506 binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

intracellular signaling cascade

transcription activator activity

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

202850_at -0.468 9.111 -2.572 2.108e-02 0.286 -3.352 ABCD3 ATP-binding cassette, sub-family D (ALD), member 3 1 94656520, 94656520 NM_002858 1p22-p21 Hs.700576 25

nucleotide binding

protein binding

ATP binding

peroxisome

peroxisomal membrane

integral to peroxisomal membrane

transport

peroxisome organization

peroxisomal long-chain fatty acid import

membrane

integral to membrane

ATPase activity

ATPase activity, coupled to transmembrane movement of substances

ABC transporters

220564_at -0.293 4.495 -2.572 2.108e-02 0.286 -3.352 RNLS renalase, FAD-dependent amine oxidase 10 -90033839, -90023600 NM_018363 10q23.31 Hs.149849 10

monooxygenase activity

extracellular region

oxidation reduction

 
244565_at 0.248 4.642 2.572 2.109e-02 0.286 -3.353 HMX2 H6 family homeobox 2 10 124897627 AI685824 10q25.2-q26.3 Hs.444756 3

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

nervous system development

brain development

positive regulation of cell proliferation

cell differentiation

inner ear morphogenesis

sequence-specific DNA binding

 
201142_at -0.377 7.518 -2.572 2.109e-02 0.286 -3.353 EIF2S1 eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa 14 66896786 AA577698 14q23.3 Hs.151777 73

RNA binding

translation initiation factor activity

protein binding

nucleus

cytoplasm

cytosol

polysome

eukaryotic translation initiation factor 2 complex

eukaryotic translation initiation factor 2B complex

regulation of translation

regulation of translational initiation in response to stress

 
217196_s_at -0.640 5.317 -2.571 2.112e-02 0.286 -3.354 CAMSAP1L1 calmodulin regulated spectrin-associated protein 1-like 1 1 198975308 AL110158 1q32.1 Hs.23585 6    
217613_at 0.340 3.194 2.571 2.114e-02 0.287 -3.355 TMEM144 transmembrane protein 144 4 159350850 AW173720 4q32.1 Hs.718582 2

membrane

integral to membrane

 
201829_at -0.413 6.941 -2.570 2.114e-02 0.287 -3.355 NET1 neuroepithelial cell transforming 1 10 5444517, 5478545 AW263232 10p15 Hs.25155 19

regulation of cell growth

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

cellular_component

intracellular

nucleus

cytoplasm

intracellular signaling cascade

regulation of Rho protein signal transduction

 
224874_at -0.493 7.384 -2.570 2.115e-02 0.287 -3.355 POLR1D polymerase (RNA) I polypeptide D, 16kDa 13 27094002, 27094028 N32181 13q12.2 Hs.507584 15

DNA binding

DNA-directed RNA polymerase activity

nucleus

nucleoplasm

transcription

protein dimerization activity

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

235426_at 0.287 4.629 2.569 2.119e-02 0.287 -3.357 GATM glycine amidinotransferase (L-arginine:glycine amidinotransferase) 15 -43440613 AW293951 15q21.1 Hs.75335 23

cytoplasm

mitochondrion

mitochondrial inner membrane

mitochondrial intermembrane space

creatine biosynthetic process

response to oxidative stress

response to nutrient

embryonic development

response to organic substance

glycine amidinotransferase activity

membrane

transferase activity

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines

tissue regeneration

response to peptide hormone stimulus

response to mercury ion

Glycine, serine and threonine metabolism

Arginine and proline metabolism

Metabolic pathways

1554400_at 0.218 4.057 2.568 2.124e-02 0.288 -3.359 TCTE3 t-complex-associated-testis-expressed 3 6 -169882139 AF519569 6q27 Hs.584808 3

membrane

 
239126_at 0.304 3.546 2.568 2.125e-02 0.288 -3.359 C19orf23 chromosome 19 open reading frame 23 19 -1218470 AA012950 19p13.3 Hs.438829 2    
1554352_s_at -0.315 5.320 -2.567 2.127e-02 0.288 -3.360 DENND4A DENN/MADD domain containing 4A 15 -63740012 BC041706 15q22.31 Hs.654567 8

DNA binding

protein binding

nucleus

regulation of transcription, DNA-dependent

 
206284_x_at -0.360 8.518 -2.567 2.127e-02 0.288 -3.360 CLTB clathrin, light chain (Lcb) 5 -175752061 NM_001834 4q2-q3 5q35 Hs.484241 17

structural molecule activity

calcium ion binding

protein binding

intracellular protein transport

membrane

vesicle-mediated transport

clathrin coat of trans-Golgi network vesicle

clathrin coat of coated pit

cytoplasmic vesicle

Lysosome

Endocytosis

Huntington's disease

1556864_at 0.277 6.183 2.567 2.129e-02 0.288 -3.361 TCTN1 tectonic family member 1 12 109536262 BC030993 12q24.11 Hs.211511 Hs.694390 5

extracellular region

multicellular organismal development

 
1557729_at 0.295 5.142 2.567 2.129e-02 0.288 -3.361 LOC100131848 FP2025 10   AK097099 10q26.11 Hs.711375 1    
223028_s_at -0.358 6.899 -2.567 2.130e-02 0.288 -3.362 SNX9 sorting nexin 9 6 158164281 BC005022 6q25.1-q26 Hs.191213 24

protein binding

cell communication

protein transport

phosphoinositide binding

 
1568704_a_at 0.397 8.136 2.566 2.132e-02 0.288 -3.362 CHERP calcium homeostasis endoplasmic reticulum protein 19 -16489699 BF511683 19p13.1 Hs.631627 5

molecular_function

RNA binding

cellular_component

intracellular

cytoplasm

endoplasmic reticulum

RNA processing

nervous system development

biological_process

perinuclear region of cytoplasm

 
223260_s_at -0.524 5.083 -2.566 2.133e-02 0.288 -3.363 POLK polymerase (DNA directed) kappa 5 74843412 AB027564 5q13 Hs.715657 39

magnesium ion binding

damaged DNA binding

DNA-directed DNA polymerase activity

nucleus

DNA replication

DNA repair

response to DNA damage stimulus

zinc ion binding

transferase activity

nucleotidyltransferase activity

 
204297_at -0.431 6.290 -2.566 2.133e-02 0.288 -3.363 PIK3C3 phosphoinositide-3-kinase, class 3 18 37789196 NM_002647 18q12.3 Hs.464971 42

nucleotide binding

inositol or phosphatidylinositol kinase activity

protein kinase activity

protein binding

ATP binding

cytosol

phosphoinositide 3-kinase complex

protein amino acid phosphorylation

1-phosphatidylinositol-3-kinase activity

transferase activity

manganese ion binding

phosphoinositide phosphorylation

phosphoinositide-mediated signaling

Inositol phosphate metabolism

Metabolic pathways

Phosphatidylinositol signaling system

Regulation of autophagy

219824_at 0.267 5.833 2.566 2.134e-02 0.288 -3.363 SLC13A4 solute carrier family 13 (sodium/sulfate symporters), member 4 7 -135016526 NM_012450 7q33 Hs.200022 Hs.490241 5

transporter activity

integral to plasma membrane

ion transport

sodium ion transport

sulfate transport

symporter activity

sodium:sulfate symporter activity

membrane

sodium ion binding

 
224793_s_at -0.511 7.460 -2.565 2.135e-02 0.288 -3.364 TGFBR1 transforming growth factor, beta receptor 1 9 100907232, 100907232 AA604375 9q22 Hs.494622 202

nucleotide binding

activation of MAPKK activity

magnesium ion binding

in utero embryonic development

kidney development

protein serine/threonine kinase activity

receptor activity

transforming growth factor beta receptor activity, type I

type II transforming growth factor beta receptor binding

type II transforming growth factor beta receptor binding

ATP binding

signal transduction

transforming growth factor beta receptor signaling pathway

transforming growth factor beta receptor signaling pathway

transforming growth factor beta receptor signaling pathway

heart development

positive regulation of cell proliferation

germ cell migration

anterior/posterior pattern formation

positive regulation of pathway-restricted SMAD protein phosphorylation

integral to membrane

transferase activity

peptidyl-serine phosphorylation

peptidyl-threonine phosphorylation

manganese ion binding

collagen fibril organization

positive regulation of cell growth

positive regulation of survival gene product expression

positive regulation of transcription

SMAD binding

protein heterodimerization activity

thymus development

neuron fate commitment

embryonic cranial skeleton morphogenesis

skeletal system morphogenesis

artery morphogenesis

cell motility

transforming growth factor beta binding

positive regulation of cell motion

positive regulation of protein kinase B signaling cascade

parathyroid gland development

palate development

pharyngeal system development

positive regulation of SMAD protein nuclear translocation

transforming growth factor beta receptor complex

response to cholesterol

MAPK signaling pathway

Cytokine-cytokine receptor interaction

Endocytosis

TGF-beta signaling pathway

Adherens junction

Pathways in cancer

Colorectal cancer

Pancreatic cancer

Chronic myeloid leukemia

212797_at -0.346 2.825 -2.565 2.136e-02 0.288 -3.364 SORT1 sortilin 1 1 -109653714 BE742268 1p21.3-p13.1 Hs.485195 Hs.703487 47

ossification

receptor activity

nucleus

lysosome

early endosome

endoplasmic reticulum

microsome

Golgi apparatus

plasma membrane

coated pit

transport

Golgi to endosome transport

endocytosis

neuropeptide signaling pathway

multicellular organismal development

endosome to lysosome transport

induction of apoptosis by extracellular signals

cell surface

nerve growth factor receptor activity

regulation of gene expression

myotube differentiation

integral to membrane

cytoplasmic membrane-bounded vesicle

vesicle organization

enzyme binding

clathrin-coated vesicle

cell differentiation

neurotensin receptor activity, non-G-protein coupled

endosome transport via multivesicular body sorting pathway

response to insulin stimulus

negative regulation of apoptosis

glucose import

nerve growth factor receptor signaling pathway

plasma membrane to endosome transport

nerve growth factor binding

perinuclear region of cytoplasm

negative regulation of lipoprotein lipase activity

Lysosome

Neurotrophin signaling pathway

213009_s_at -0.413 7.799 -2.565 2.136e-02 0.288 -3.364 TRIM37 tripartite motif-containing 37 17 -54430342, -54414781 AK022701 17q23.2 Hs.579079 Hs.605697 23

protein binding

intracellular

cytoplasm

peroxisome

zinc ion binding

metal ion binding

Ubiquitin mediated proteolysis

1555961_a_at -0.286 11.509 -2.565 2.136e-02 0.288 -3.364 HINT1 histidine triad nucleotide binding protein 1 5 -130522773, -130522773 AK054976 5q31.2 Hs.483305 26

protein kinase C binding

nucleus

cytoplasm

cytoskeleton

signal transduction

hydrolase activity

 
229422_at -0.631 6.298 -2.565 2.137e-02 0.288 -3.364 NRD1 nardilysin (N-arginine dibasic convertase) 1 -52027453 AA448346 1p32.2-p32.1 Hs.584782 18

metalloendopeptidase activity

protein binding

cytosol

proteolysis

neuromuscular junction development

peptidase activity

zinc ion binding

cell proliferation

cell surface

cell migration

metal ion binding

epidermal growth factor binding

positive regulation of membrane protein ectodomain proteolysis

regulation of endopeptidase activity

 
223547_at -0.535 5.665 -2.565 2.138e-02 0.288 -3.365 JKAMP JNK1/MAPK8-associated membrane protein 14 59020913 AL038769 14q23.1 Hs.446850 12

plasma membrane

integral to membrane

 
205747_at 0.349 3.620 2.565 2.139e-02 0.288 -3.365 CBLN1 cerebellin 1 precursor 16 -47869711 NM_004352 16q12.1 Hs.458423 8

protein binding

extracellular region

synaptic transmission

nervous system development

membrane

cell junction

protein homodimerization activity

synapse

 
1553146_at 0.302 4.228 2.564 2.139e-02 0.288 -3.365 C3orf30 chromosome 3 open reading frame 30 3 120347686 NM_152539 3q13.32 Hs.632574 1    
221706_s_at -0.305 7.094 -2.564 2.140e-02 0.288 -3.366 USE1 unconventional SNARE in the ER 1 homolog (S. cerevisiae) 19 17187154 BC006005 19p13.11 Hs.16187 12

protein binding

lysosome

endoplasmic reticulum

ER to Golgi vesicle-mediated transport

lysosomal transport

protein transport

membrane

integral to membrane

vesicle-mediated transport

protein catabolic process

SNARE interactions in vesicular transport

224303_x_at -0.445 5.256 -2.564 2.140e-02 0.288 -3.366 NIN ninein (GSK3B interacting protein) 14 -50263700, -50262296, -50262296, -50256230 AF223938 14q22.1 Hs.310429 23

nucleotide binding

protein binding

GTP binding

centrosome

microtubule

centrosome localization

 
209577_at 0.251 6.605 2.563 2.145e-02 0.289 -3.368 PCYT2 phosphate cytidylyltransferase 2, ethanolamine 17 -77455383, -2421678 BC000351 17q25.3 Hs.645248 8

ethanolamine-phosphate cytidylyltransferase activity

cellular_component

phospholipid biosynthetic process

biosynthetic process

transferase activity

nucleotidyltransferase activity

Aminophosphonate metabolism

Glycerophospholipid metabolism

Metabolic pathways

221413_at 0.288 4.764 2.563 2.145e-02 0.289 -3.368 KCNAB3 potassium voltage-gated channel, shaker-related subfamily, beta member 3 17 -7766751 NM_004732 17p13.1 Hs.435074 6

voltage-gated ion channel activity

voltage-gated potassium channel activity

cytoplasm

ion transport

potassium ion transport

potassium channel regulator activity

integral to membrane

oxidoreductase activity

potassium ion binding

oxidation reduction

 
204217_s_at -0.546 8.193 -2.563 2.146e-02 0.289 -3.368 RTN2 reticulon 2 19 -50680389, -50680389, -50680389 NM_005619 19q13.32 Hs.47517 10

signal transducer activity

endoplasmic reticulum

signal transduction

membrane

integral to membrane

integral to endoplasmic reticulum membrane

 
221499_s_at -0.331 6.816 -2.563 2.147e-02 0.289 -3.368 STX16 syntaxin 16 20 56659733, 56659733 AK026970 20q13.32 Hs.307913 14

SNAP receptor activity

cytoplasm

microsome

Golgi apparatus

intracellular protein transport

intra-Golgi vesicle-mediated transport

membrane

integral to membrane

vesicle-mediated transport

SNARE complex

retrograde transport, endosome to Golgi

SNARE interactions in vesicular transport

228266_s_at 0.385 4.389 2.562 2.149e-02 0.289 -3.369 HDGFRP3 hepatoma-derived growth factor, related protein 3 15 -81597819 BE703418 15q25.2 Hs.513954 9

nucleus

cytoplasm

growth factor activity

cell proliferation

 
200954_at 0.300 8.103 2.562 2.149e-02 0.289 -3.369 ATP6V0C ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c 16 2503953 NM_001694 16p13.3 Hs.389107 23

protein binding

vacuole

ion transport

ATP synthesis coupled proton transport

proton transport

membrane

integral to membrane

proton-transporting V-type ATPase, V0 domain

interspecies interaction between organisms

proton-transporting ATP synthase complex, coupling factor F(o)

hydrogen ion transporting ATP synthase activity, rotational mechanism

proton-transporting ATPase activity, rotational mechanism

Oxidative phosphorylation

Metabolic pathways

Lysosome

Vibrio cholerae infection

Epithelial cell signaling in Helicobacter pylori infection

219805_at 0.414 6.465 2.561 2.153e-02 0.289 -3.371 CXorf56 chromosome X open reading frame 56 X -118557528 NM_022101 Xq23 Hs.248572 3

protein binding

 
218977_s_at 0.404 5.319 2.560 2.158e-02 0.290 -3.373 TRNAU1AP tRNA selenocysteine 1 associated protein 1 1 28752115 NM_017846 1p35.3 Hs.533626 5

nucleotide binding

selenocysteine incorporation

RNA binding

nucleus

cytoplasm

translation

 
208428_at 0.301 3.996 2.559 2.162e-02 0.290 -3.375 TAP2 transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) 6 -32901164, -32897587, -4174042, -4170466, -3979239, -3975663 NM_018833 6p21.3 Hs.502 129

nucleotide binding

homoaconitate hydratase activity

transporter activity

ATP binding

nucleus

endoplasmic reticulum

endoplasmic reticulum lumen

cytosol

protein complex assembly

intracellular protein transport

immune response

peptide transporter activity

peptide antigen-transporting ATPase activity

peptide transport

membrane

integral to membrane

ATPase activity

antigen processing and presentation of endogenous peptide antigen via MHC class I

MHC class I protein binding

phosphate binding

peptide antigen binding

ATPase activity, coupled to transmembrane movement of substances

TAP complex

interspecies interaction between organisms

cytosol to ER transport

tapasin binding

protein heterodimerization activity

ABC transporters

Antigen processing and presentation

Primary immunodeficiency

211282_x_at 0.307 5.251 2.559 2.162e-02 0.290 -3.375 TNFRSF25 tumor necrosis factor receptor superfamily, member 25 1 -6446757, -6443800 U94506 1p36.2 Hs.462529 30

receptor activity

tumor necrosis factor receptor activity

protein binding

extracellular region

cytosol

plasma membrane

integral to plasma membrane

cell surface receptor linked signal transduction

induction of apoptosis by extracellular signals

regulation of apoptosis

Cytokine-cytokine receptor interaction

215415_s_at 0.292 3.413 2.559 2.163e-02 0.290 -3.375 LYST lysosomal trafficking regulator 1 -233890968 U70064 1q42.1-q42.2 Hs.532411 23

protein binding

cytoplasm

protein transport

microtubule cytoskeleton

leukocyte chemotaxis

melanosome organization

endosome to lysosome transport via multivesicular body sorting pathway

mast cell secretory granule organization

natural killer cell mediated cytotoxicity

defense response to bacterium

defense response to protozoan

pigmentation

defense response to virus

 
219002_at 1.043 7.443 2.559 2.163e-02 0.290 -3.375 FASTKD1 FAST kinase domains 1 2 -170094508 NM_024622 2q31 Hs.529276 6

protein kinase activity

ATP binding

apoptosis

 
219646_at -0.557 6.572 -2.558 2.165e-02 0.290 -3.376 DEF8 differentially expressed in FDCP 8 homolog (mouse) 16 88542651, 88542683 NM_017702 16q24.3 Hs.62771 4

protein binding

intracellular signaling cascade

zinc ion binding

diacylglycerol binding

metal ion binding

 
228023_x_at -0.343 7.370 -2.558 2.166e-02 0.290 -3.376 AMY2B amylase, alpha 2B (pancreatic) 1 103898844 AV699389 1p21 Hs.484588 19

alpha-amylase activity

calcium ion binding

extracellular region

carbohydrate metabolic process

digestion

metabolic process

hydrolase activity, acting on glycosyl bonds

chloride ion binding

Starch and sucrose metabolism

Metabolic pathways

208745_at 0.430 9.469 2.558 2.166e-02 0.290 -3.376 ATP5L ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G 11 117777313 AA917672 11q23.3 Hs.486360 15

mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)

protein binding

mitochondrion

ion transport

hydrogen ion transmembrane transporter activity

ATP synthesis coupled proton transport

proton transport

membrane

ATPase activity

Oxidative phosphorylation

Metabolic pathways

222083_at 0.355 5.101 2.558 2.168e-02 0.290 -3.377 GLYAT glycine-N-acyltransferase 11 -58234136, -58232805 AW024233 11q12.1 Hs.145384 12

mitochondrion

acyl-CoA metabolic process

acyltransferase activity

response to toxin

transferase activity

glycine N-acyltransferase activity

 
202829_s_at -0.386 7.722 -2.558 2.169e-02 0.290 -3.378 VAMP7 vesicle-associated membrane protein 7 X, Y 154764140, 57623340 NM_005638 Xq28 Yq12 Hs.24167 38

protein binding

protein binding

lysosomal membrane

endosome

endoplasmic reticulum

endoplasmic reticulum membrane

Golgi apparatus

ER to Golgi vesicle-mediated transport

vesicle fusion

phagocytosis, engulfment

endosome to lysosome transport

protein transport

membrane

integral to membrane

calcium ion-dependent exocytosis

SNARE complex

cytoplasmic vesicle

late endosome membrane

eosinophil degranulation

neutrophil degranulation

apical part of cell

phagocytic vesicle

SNARE interactions in vesicular transport

224991_at 0.366 4.888 2.558 2.169e-02 0.290 -3.378 CMIP c-Maf-inducing protein 16 80036275, 80086454 AI819630 16q23 Hs.709248 7

nucleus

cytoplasm

 
212373_at -0.595 5.730 -2.558 2.169e-02 0.290 -3.378 FEM1B fem-1 homolog b (C. elegans) 15 66357194 AW139179 15q22 Hs.362733 9

ubiquitin-protein ligase activity

death receptor binding

death receptor binding

cellular_component

cytoplasm

induction of apoptosis

modification-dependent protein catabolic process

regulation of apoptosis

regulation of ubiquitin-protein ligase activity

 
202568_s_at -0.429 7.023 -2.557 2.170e-02 0.290 -3.378 MARK3 MAP/microtubule affinity-regulating kinase 3 14 102921453 AI745639 14q32.3 Hs.35828 24

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

transferase activity

 
225876_at 0.509 5.801 2.557 2.170e-02 0.290 -3.378 NIPAL3 NIPA-like domain containing 3 1 24614831 T84558 1p36.12-p35.1 Hs.523442 6

membrane

integral to membrane

 
201795_at -0.359 7.021 -2.557 2.170e-02 0.290 -3.378 LBR lamin B receptor 1 -223655826, -223655826 NM_002296 1q42.1 Hs.435166 33

DNA binding

receptor activity

lamin binding

nucleus

nuclear envelope

integral to nuclear inner membrane

membrane

integral to membrane

delta14-sterol reductase activity

 
214258_x_at -0.332 6.675 -2.557 2.170e-02 0.290 -3.378 KAT5 K(lysine) acetyltransferase 5 11 65236064 AA886971 11q13 Hs.397010 88

chromatin

chromatin binding

transcription coactivator activity

histone acetyltransferase activity

protein binding

nucleus

nucleolus

cytoplasm

double-strand break repair

chromatin assembly or disassembly

DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator

zinc ion binding

acyltransferase activity

chromatin modification

histone acetylation

transferase activity

androgen receptor signaling pathway

Piccolo NuA4 histone acetyltransferase complex

NuA4 histone acetyltransferase complex

regulation of growth

interspecies interaction between organisms

regulation of transcription

positive regulation of transcription, DNA-dependent

positive regulation of transcription, DNA-dependent

metal ion binding

perinuclear region of cytoplasm

androgen receptor binding

 
210845_s_at 0.260 5.166 2.557 2.171e-02 0.290 -3.378 PLAUR plasminogen activator, urokinase receptor 19 -48844571, -48842087 U08839 19q13 Hs.466871 234

extracellular region

plasma membrane

plasma membrane

cell motion

chemotaxis

signal transduction

blood coagulation

cell surface

integral to membrane

attachment of GPI anchor to protein

extrinsic to membrane

enzyme binding

regulation of proteolysis

U-plasminogen activator receptor activity

anchored to membrane

skeletal muscle regeneration

Complement and coagulation cascades

206612_at -0.403 8.832 -2.557 2.171e-02 0.290 -3.379 CACNG1 calcium channel, voltage-dependent, gamma subunit 1 17 62471167 NM_000727 17q24 Hs.147989 8

voltage-gated ion channel activity

calcium ion binding

voltage-gated calcium channel complex

ion transport

calcium ion transport

muscle contraction

dihydropyridine-sensitive calcium channel activity

membrane

integral to membrane

MAPK signaling pathway

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

243116_at 0.431 4.150 2.557 2.172e-02 0.290 -3.379 PIP5KL1 phosphatidylinositol-4-phosphate 5-kinase-like 1 9 -129723630, -129723628 AI923090 9q34.11 Hs.445486 2

nucleotide binding

protein binding

ATP binding

cytoplasm

membrane

kinase activity

1-phosphatidylinositol-4-phosphate 5-kinase activity

transferase activity

cell projection

phosphatidylinositol metabolic process

 
1560220_a_at 0.257 3.579 2.557 2.173e-02 0.290 -3.379 CBY1 chibby homolog 1 (Drosophila) 22 37382603 BC008839 22q12 Hs.334911 Hs.596584 20

nucleus

Golgi apparatus

trans-Golgi network

beta-catenin binding

protein localization

nuclear speck

negative regulation of Wnt receptor signaling pathway

negative regulation of Wnt receptor signaling pathway

identical protein binding

fat cell differentiation

negative regulation of transcription, DNA-dependent

cardiac muscle cell differentiation

 
201267_s_at -0.380 9.617 -2.556 2.174e-02 0.290 -3.380 PSMC3 proteasome (prosome, macropain) 26S subunit, ATPase, 3 11 -47396895 AL545523 11p12-p13 Hs.250758 57

nucleotide binding

proteasome complex

blastocyst development

transcription coactivator activity

transcription corepressor activity

protein binding

ATP binding

nucleus

cytoplasm

cytosol

hydrolase activity

nucleoside-triphosphatase activity

protein catabolic process

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

interspecies interaction between organisms

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

238337_s_at -0.483 8.666 -2.556 2.176e-02 0.290 -3.380 DNAJC21 DnaJ (Hsp40) homolog, subfamily C, member 21 5 34965454 BF678298 5p13.2 Hs.131887 5

nucleic acid binding

intracellular

zinc ion binding

heat shock protein binding

metal ion binding

 
223503_at 0.377 3.412 2.556 2.176e-02 0.290 -3.381 TMEM163 transmembrane protein 163 2 -134929800 AF255647 2q21.3 Hs.369471 Hs.595089 5

membrane

integral to membrane

 
219022_at -0.459 5.280 -2.556 2.177e-02 0.290 -3.381 C12orf43 chromosome 12 open reading frame 43 12 -119925230 NM_022895 12q Hs.528671 10    
211698_at -0.366 8.884 -2.556 2.177e-02 0.290 -3.381 EID1 EP300 interacting inhibitor of differentiation 1 15 46957581 AF349444 15q21.1-q21.2 Hs.255973 Hs.714048 12

negative regulation of transcription from RNA polymerase II promoter

transcription corepressor activity

protein binding

cellular_component

nucleus

cytoplasm

cell cycle

specific transcriptional repressor activity

cell differentiation

histone acetyltransferase regulator activity

histone acetyltransferase binding

regulation of transcription

 
206854_s_at -0.517 6.392 -2.556 2.178e-02 0.290 -3.381 MAP3K7 mitogen-activated protein kinase kinase kinase 7 6 -91282073, -91282073 NM_003188 6q16.1-q16.3 Hs.719192 114

nucleotide binding

magnesium ion binding

positive regulation of T cell cytokine production

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

cytosol

protein amino acid phosphorylation

signal transduction

transforming growth factor beta receptor signaling pathway

activation of NF-kappaB-inducing kinase activity

transferase activity

positive regulation of interleukin-2 production

T cell receptor signaling pathway

positive regulation of T cell activation

MAPK signaling pathway

Wnt signaling pathway

Adherens junction

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

T cell receptor signaling pathway

230800_at 0.392 6.495 2.555 2.179e-02 0.290 -3.382 ADCY4 adenylate cyclase 4 14 -23857409 AV699353 14q12 Hs.443428 13

nucleotide binding

magnesium ion binding

adenylate cyclase activity

ATP binding

intracellular

cAMP biosynthetic process

G-protein signaling, coupled to cAMP nucleotide second messenger

intracellular signaling cascade

membrane

integral to membrane

dendrite

Purine metabolism

Calcium signaling pathway

Chemokine signaling pathway

Vascular smooth muscle contraction

Gap junction

Taste transduction

GnRH signaling pathway

Melanogenesis

201726_at -0.433 8.899 -2.555 2.180e-02 0.290 -3.382 ELAVL1 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R) 19 -7929456 BC003376 19p13.2 Hs.184492 Hs.713744 115

nucleotide binding

mRNA binding

nucleus

multicellular organismal development

identical protein binding

mRNA stabilization

 
205337_at 0.301 2.805 2.555 2.180e-02 0.290 -3.382 DCT dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2) 13 -93889841 AL139318 13q32 Hs.301865 41

dopachrome isomerase activity

copper ion binding

microsome

cytosol

melanin biosynthetic process from tyrosine

metabolic process

zinc ion binding

epidermis development

membrane

integral to membrane

oxidoreductase activity

isomerase activity

melanosome

metal ion binding

pigmentation during development

cell development

Tyrosine metabolism

Metabolic pathways

Melanogenesis

204435_at -0.662 6.606 -2.555 2.181e-02 0.290 -3.382 NUPL1 nucleoporin like 1 13 24773665 NM_014778 13q12.13 Hs.310453 Hs.719291 9

nucleus

nuclear pore

protein transport

membrane

mRNA transport

intracellular protein transmembrane transport

 
202898_at 0.333 5.374 2.555 2.182e-02 0.290 -3.383 SDC3 syndecan 3 1 -31114899 NM_014654 1pter-p22.3 Hs.158287 35

cytoskeletal protein binding

membrane

integral to membrane

ECM-receptor interaction

Cell adhesion molecules (CAMs)

1553227_s_at -0.395 5.098 -2.554 2.184e-02 0.291 -3.384 BRWD1 bromodomain and WD repeat domain containing 1 21 -39590234, -39484017, -39479273 NM_018963 21q22.2 Hs.654740 8

protein binding

nucleus

cytoplasm

regulation of transcription from RNA polymerase II promoter

biological_process

transcription regulator activity

regulation of transcription

 
214873_at 0.289 3.851 2.554 2.185e-02 0.291 -3.384 LRP5L low density lipoprotein receptor-related protein 5-like 22 -24077385, -24077385 AL137651 22q11.23 Hs.634058 3

membrane

 
200086_s_at 0.363 11.778 2.554 2.185e-02 0.291 -3.384 COX4I1 cytochrome c oxidase subunit IV isoform 1 16 84390696 AA854966 16q22-qter Hs.433419 17

cytochrome-c oxidase activity

protein binding

nucleus

mitochondrion

mitochondrial inner membrane

generation of precursor metabolites and energy

membrane

Oxidative phosphorylation

Metabolic pathways

Cardiac muscle contraction

Alzheimer's disease

Parkinson's disease

Huntington's disease

210253_at -0.382 4.230 -2.554 2.185e-02 0.291 -3.384 HTATIP2 HIV-1 Tat interactive protein 2, 30kDa 11 20341806, 20341822, 20341864, 20341978, 20342262 AF092095 11p15.1 Hs.90753 31

RNA polymerase II transcription factor activity

transcription coactivator activity

protein binding

nucleus

nuclear envelope

cytoplasm

regulation of transcription from RNA polymerase II promoter

anti-apoptosis

induction of apoptosis

multicellular organismal development

oxidoreductase activity

cell differentiation

regulation of apoptosis

interspecies interaction between organisms

regulation of angiogenesis

nuclear import

oxidation reduction

 
203051_at -0.221 6.643 -2.554 2.186e-02 0.291 -3.385 BAHD1 bromo adjacent homology domain containing 1 15 38520702 NM_014952 15q15.1 Hs.22109 5

DNA binding

 
38671_at 0.322 7.151 2.553 2.191e-02 0.291 -3.387 PLXND1 plexin D1 3 -130756745 AB014520 3q22.1 Hs.301685 10

receptor activity

intracellular

plasma membrane

signal transduction

multicellular organismal development

integral to membrane

 
218250_s_at -0.368 9.799 -2.552 2.191e-02 0.291 -3.387 CNOT7 CCR4-NOT transcription complex, subunit 7 8 -17133392, -17131110 NM_013354 8p22-p21.3 Hs.645009 Hs.719129 19

nucleic acid binding

transcription factor activity

signal transducer activity

protein binding

nucleus

carbohydrate metabolic process

signal transduction

transcription activator activity

CCR4-NOT complex

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

RNA degradation

204170_s_at -0.987 5.215 -2.552 2.191e-02 0.291 -3.387 CKS2 CDC28 protein kinase regulatory subunit 2 9 91115932 NM_001827 9q22 Hs.83758 15

regulation of cyclin-dependent protein kinase activity

cell cycle

spindle organization

meiosis I

cell proliferation

cyclin-dependent protein kinase regulator activity

phosphoinositide-mediated signaling

cell division

 
218517_at -0.329 7.224 -2.552 2.192e-02 0.291 -3.387 PHF17 PHD finger protein 17 4 129950228, 129950228 NM_024900 4q26-q27 Hs.12420 14

histone acetyltransferase complex

protein binding

nucleus

cytoplasm

apoptosis

response to stress

zinc ion binding

negative regulation of cell growth

histone H3 acetylation

histone H4-K5 acetylation

histone H4-K8 acetylation

histone H4-K12 acetylation

histone H4-K16 acetylation

regulation of transcription

metal ion binding

 
238327_at 0.476 3.656 2.552 2.194e-02 0.291 -3.388 ODF3B outer dense fiber of sperm tails 3B 22 -49315703 AI962367 22q13.33 Hs.531314 6    
214084_x_at 0.310 5.565 2.552 2.195e-02 0.291 -3.388 NCF1C neutrophil cytosolic factor 1C pseudogene 7 -74210380 AW072388 7q11.23 Hs.647047 Hs.648940 Hs.655201 58

protein binding

cytoplasm

cell communication

phosphoinositide binding

 
231480_at 0.266 4.688 2.551 2.197e-02 0.291 -3.389 SLC6A19 solute carrier family 6 (neutral amino acid transporter), member 19 5 1254709 AI636105 5p15.33 Hs.481478 10

neurotransmitter:sodium symporter activity

integral to plasma membrane

neurotransmitter transport

neutral amino acid transmembrane transporter activity

symporter activity

neutral amino acid transport

membrane

 
233006_at 0.379 5.536 2.551 2.197e-02 0.291 -3.389 SEPT4 septin 4 17 -53952614, -53952614 AU147957 17q22-q23 Hs.287518 29

nucleotide binding

cytokinesis

GTPase activity

structural molecule activity

protein binding

GTP binding

nucleus

cytoplasm

cell cycle

 
218648_at -0.350 7.432 -2.551 2.200e-02 0.291 -3.390 CRTC3 CREB regulated transcription coactivator 3 15 88874201 NM_022769 15q26.1 Hs.567572 10

nucleus

cytoplasm

interspecies interaction between organisms

regulation of transcription

 
209331_s_at -0.386 5.527 -2.551 2.200e-02 0.291 -3.390 MAX MYC associated factor X 14 -64620214, -64614273, -64611597, -64542644 AA723514 14q23 Hs.285354 Hs.712926 56

transcription factor activity

transcription coactivator activity

protein binding

nucleus

cytoplasm

transcription from RNA polymerase II promoter

regulation of transcription

MAPK signaling pathway

Pathways in cancer

Small cell lung cancer

201520_s_at -0.526 9.375 -2.550 2.200e-02 0.291 -3.391 GRSF1 G-rich RNA sequence binding factor 1 4 -71900362, -71900362 BF034561 4q13 Hs.309763 6

mRNA binding

cytoplasm

mRNA polyadenylation

 
1554661_s_at -0.406 4.772 -2.550 2.202e-02 0.291 -3.391 C1orf71 chromosome 1 open reading frame 71 1 244796261, 244796261 BC036200 1q44 Hs.368353 9

membrane

integral to membrane

protein complex

 
1552879_a_at 0.284 3.964 2.550 2.202e-02 0.291 -3.391 ATOH7 atonal homolog 7 (Drosophila) 10 -69660387 BC032621 10q21.3 10q21.3-q22.1 Hs.175396 4

DNA binding

nucleus

multicellular organismal development

nervous system development

circadian rhythm

entrainment of circadian clock

cell differentiation

transcription regulator activity

regulation of transcription

 
225635_s_at -0.439 4.809 -2.550 2.202e-02 0.291 -3.391 LOC401504 hypothetical gene supported by AK091718 9   BG535378 9p13.2 Hs.446271 2    
214180_at 0.328 5.544 2.550 2.202e-02 0.291 -3.391 MAN1C1 mannosidase, alpha, class 1C, member 1 1 25816545 AW340588 1p35 Hs.197043 26

mannosyl-oligosaccharide 1,2-alpha-mannosidase activity

calcium ion binding

Golgi apparatus

protein amino acid N-linked glycosylation

metabolic process

membrane

integral to membrane

hydrolase activity, acting on glycosyl bonds

integral to Golgi membrane

N-Glycan biosynthesis

Metabolic pathways

205073_at -1.047 7.758 -2.550 2.202e-02 0.291 -3.391 CYP2J2 cytochrome P450, family 2, subfamily J, polypeptide 2 1 -60131567 NM_000775 1p31.3-p31.2 Hs.152096 50

endoplasmic reticulum

microsome

fatty acid metabolic process

icosanoid metabolic process

regulation of heart contraction

arachidonic acid epoxygenase activity

electron carrier activity

membrane

heme binding

metal ion binding

oxidation reduction

aromatase activity

Arachidonic acid metabolism

Linoleic acid metabolism

Metabolic pathways

1570225_at 0.287 5.102 2.550 2.203e-02 0.291 -3.391 TMEM150B transmembrane protein 150B 19 -60516038 BC020862 19q13.42 Hs.382625 2

membrane

integral to membrane

 
232938_at 0.250 4.389 2.550 2.204e-02 0.291 -3.392 SFMBT2 Scm-like with four mbt domains 2 10 -7244254 AL118884 10p14 Hs.407983 3

nucleus

regulation of transcription

 
1553732_s_at 0.261 5.387 2.549 2.206e-02 0.292 -3.393 CCDC123 coiled-coil domain containing 123 19 -38061743 NM_032816 19q13.11 Hs.599703 3

protein binding

mitochondrion

 
219922_s_at -0.495 6.370 -2.549 2.207e-02 0.292 -3.393 LTBP3 latent transforming growth factor beta binding protein 3 11 -65062605 NM_021070 11q13.1 Hs.289019 19

binding

calcium ion binding

extracellular region

growth factor binding

 
237730_at 0.251 5.252 2.549 2.208e-02 0.292 -3.393 LOC100130700 similar to hCG2038355 16   AA824251 16p11.1 Hs.97712      
227572_at -0.377 6.840 -2.548 2.210e-02 0.292 -3.394 USP30 ubiquitin specific peptidase 30 12 107974762 AA528138 12q24.11 Hs.486434 Hs.660996 7

ubiquitin thiolesterase activity

mitochondrion

mitochondrial outer membrane

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

membrane

integral to membrane

 
211006_s_at -1.993 6.748 -2.548 2.211e-02 0.292 -3.395 KCNB1 potassium voltage-gated channel, Shab-related subfamily, member 1 20 -47421911 L02840 20q13.2 Hs.84244 28

voltage-gated ion channel activity

voltage-gated potassium channel activity

protein binding

ion transport

potassium ion transport

voltage-gated potassium channel complex

membrane

integral to membrane

potassium ion binding

Taste transduction

238665_at 0.323 5.866 2.548 2.212e-02 0.292 -3.395 LOC100133142 similar to zinc finger protein 208 19   AI084583 19q13.42        
237256_at 0.280 4.427 2.548 2.213e-02 0.292 -3.395 FBXL12 F-box and leucine-rich repeat protein 12 19 -9781942 AI479104 19p13.2 Hs.12439 7

ubiquitin ligase complex

cytoplasm

ubiquitin-dependent protein catabolic process

 
223230_at -0.381 5.815 -2.547 2.215e-02 0.292 -3.396 PRPF38A PRP38 pre-mRNA processing factor 38 (yeast) domain containing A 1 52642806 AL521713 1p33-p32.1 Hs.5301 5

nucleus

spliceosomal complex

mRNA processing

RNA splicing

 
242499_at 0.290 5.024 2.547 2.216e-02 0.292 -3.397 U2AF1 U2 small nuclear RNA auxiliary factor 1 21 -43386134 AA448694 21q22.3 Hs.365116 47

nucleotide binding

nuclear mRNA splicing, via spliceosome

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

spliceosomal complex

zinc ion binding

RNA splicing

Cajal body

metal ion binding

RS domain binding

 
215795_at 1.118 8.240 2.547 2.216e-02 0.292 -3.397 MYH7B myosin, heavy chain 7B, cardiac muscle, beta 20 33026866 AK000947 20q11.22 Hs.414122 8

nucleotide binding

motor activity

actin binding

ATP binding

striated muscle thick filament

striated muscle contraction

membrane

myosin complex

Tight junction

211724_x_at -0.498 7.774 -2.547 2.217e-02 0.292 -3.397 MIOS missing oocyte, meiosis regulator, homolog (Drosophila) 7 7573140 BC005883 7p22-p21 Hs.520215 4    
1556573_s_at -0.249 4.715 -2.546 2.218e-02 0.292 -3.398 LOC286178 hypothetical protein LOC286178 8   AK090741 8q12.1 Hs.255156 1    
201020_at -0.569 7.768 -2.546 2.218e-02 0.292 -3.398 YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide 22 30670478 NM_003405 22q12.3 Hs.226755 76

actin binding

insulin-like growth factor receptor binding

cytoplasm

glucocorticoid catabolic process

intracellular protein transport

transcription activator activity

enzyme binding

protein domain specific binding

glucocorticoid receptor binding

glucocorticoid receptor signaling pathway

regulation of neuron differentiation

positive regulation of transcription

regulation of synaptic plasticity

negative regulation of dendrite morphogenesis

Cell cycle

Neurotrophin signaling pathway

208631_s_at 0.489 9.363 2.546 2.218e-02 0.292 -3.398 HADHA hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), alpha subunit 2 -26267007 U04627 2p23 Hs.516032 36

acyl-CoA binding

3-hydroxyacyl-CoA dehydrogenase activity

acetyl-CoA C-acetyltransferase activity

acetyl-CoA C-acyltransferase activity

enoyl-CoA hydratase activity

binding

mitochondrion

mitochondrial inner membrane

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

oxidoreductase activity

fatty acid beta-oxidation multienzyme complex

long-chain-enoyl-CoA hydratase activity

long-chain-3-hydroxyacyl-CoA dehydrogenase activity

lyase activity

response to drug

mitochondrial nucleoid

NAD or NADH binding

oxidation reduction

Fatty acid elongation in mitochondria

Fatty acid metabolism

Valine, leucine and isoleucine degradation

Lysine degradation

Tryptophan metabolism

beta-Alanine metabolism

Benzoate degradation via CoA ligation

Propanoate metabolism

Butanoate metabolism

Limonene and pinene degradation

Caprolactam degradation

Biosynthesis of unsaturated fatty acids

Metabolic pathways

208922_s_at -0.350 7.205 -2.546 2.219e-02 0.292 -3.398 NXF1 nuclear RNA export factor 1 11 -62316173 BC004904 11q12-q13 Hs.523739 Hs.601546 45

nucleotide binding

mRNA binding

nucleocytoplasmic transporter activity

protein binding

intracellular

nucleus

nuclear pore

nucleoplasm

cytoplasm

RNA export from nucleus

transport

nuclear speck

poly(A)+ mRNA export from nucleus

nuclear inclusion body

interspecies interaction between organisms

mRNA transport

 
41037_at -0.470 7.512 -2.546 2.219e-02 0.292 -3.398 TEAD4 TEA domain family member 4 12 2938756, 2939222 U63824 12p13.3-p13.2 Hs.94865 16

skeletal system development

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

muscle organ development

 
200005_at -0.435 8.377 -2.546 2.220e-02 0.292 -3.398 EIF3D eukaryotic translation initiation factor 3, subunit D 22 -35236842 NM_003753 22q13.1 Hs.55682 20

translation initiation factor activity

translation initiation factor activity

protein binding

cytoplasm

cytosol

eukaryotic translation initiation factor 3 complex

translational initiation

translational initiation

 
200922_at -0.267 5.461 -2.546 2.220e-02 0.292 -3.398 KDELR1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 19 -53577638 NM_006801 19q13.3 Hs.515515 14

receptor activity

KDEL sequence binding

protein binding

membrane fraction

endoplasmic reticulum

ER-Golgi intermediate compartment

protein retention in ER lumen

intracellular protein transport

membrane

integral to membrane

vesicle-mediated transport

Vibrio cholerae infection

204576_s_at -0.427 6.347 -2.546 2.220e-02 0.292 -3.398 CLUAP1 clusterin associated protein 1 16 3490963, 3499894 AA207013 16p13.3 Hs.155995 7

protein binding

nucleus

 
219144_at -0.680 9.919 -2.546 2.222e-02 0.292 -3.399 DUSP26 dual specificity phosphatase 26 (putative) 8 -33568392 NM_024025 8p12 Hs.8719 6

protein tyrosine phosphatase activity

nucleus

cytoplasm

Golgi apparatus

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

 
227719_at 1.476 7.120 2.546 2.222e-02 0.292 -3.399 SMAD9 SMAD family member 9 13 -36320206 AA934610 13q12-q14 Hs.123119 20

transcription factor activity

protein binding

intracellular

nucleus

nucleoplasm

transcription factor complex

cytoplasm

cytosol

regulation of transcription, DNA-dependent

transforming growth factor beta receptor signaling pathway

BMP signaling pathway

BMP signaling pathway

transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity

TGF-beta signaling pathway

201327_s_at -0.592 8.069 -2.545 2.223e-02 0.292 -3.399 CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) 7 56086871 NM_001762 7p11.2 Hs.82916 17

nucleotide binding

ATP binding

cytoplasm

chaperonin-containing T-complex

protein folding

unfolded protein binding

 
236998_at 0.279 5.013 2.545 2.224e-02 0.292 -3.400 CCDC56 coiled-coil domain containing 56 17 -38203177 AI056409 17q21 Hs.16059 4

mitochondrion

membrane

integral to membrane

 
223301_s_at 0.362 6.164 2.545 2.225e-02 0.292 -3.400 CCDC82 coiled-coil domain containing 82 11 -95725576 AF245436 11q21 Hs.525088 9

protein binding

 
244740_at 1.003 6.242 2.545 2.225e-02 0.292 -3.401 MGC9913 hypothetical protein MGC9913 19   BE855713 19q13.43 Hs.23133 1    
201455_s_at -0.487 8.739 -2.544 2.227e-02 0.293 -3.401 NPEPPS aminopeptidase puromycin sensitive 17 42963442 AJ132583 17q21 Hs.443837 14

aminopeptidase activity

protein binding

nucleus

cytoplasm

cytosol

proteolysis

peptidase activity

metallopeptidase activity

zinc ion binding

metal ion binding

 
236939_at 0.373 3.724 2.544 2.229e-02 0.293 -3.402 PTPLAD2 protein tyrosine phosphatase-like A domain containing 2 9 -20996364 AA687316 9p21.3 Hs.716678 1

membrane

integral to membrane

 
224484_s_at -0.517 4.733 -2.544 2.229e-02 0.293 -3.402 BRMS1L breast cancer metastasis-suppressor 1-like 14 35365347 BC006250 14q13.2 Hs.525299 3

nucleus

regulation of growth

regulation of transcription

 
206372_at -0.799 9.978 -2.544 2.231e-02 0.293 -3.403 MYF6 myogenic factor 6 (herculin) 12 79625576 NM_002469 12q21 Hs.35937 12

somitogenesis

transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

multicellular organismal development

muscle organ development

skeletal muscle tissue development

negative regulation of transcription

cell differentiation

positive regulation of transcription

 
1565758_at 0.425 4.107 2.543 2.231e-02 0.293 -3.403 RPL13 ribosomal protein L13 16 88154590, 88154631 AW302784 16q24.3 17p11.2 Hs.410817 17

RNA binding

structural constituent of ribosome

protein binding

intracellular

cytosol

translational elongation

cytosolic ribosome

Ribosome

203879_at 0.327 5.436 2.543 2.232e-02 0.293 -3.403 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 1 9634376 U86453 1p36.2 Hs.518451 40

nucleotide binding

inositol or phosphatidylinositol kinase activity

protein binding

ATP binding

phosphoinositide 3-kinase complex

protein amino acid phosphorylation

signal transduction

1-phosphatidylinositol-3-kinase activity

transferase activity

phosphotransferase activity, alcohol group as acceptor

phosphoinositide phosphorylation

phosphatidylinositol-4,5-bisphosphate 3-kinase activity

phosphoinositide-mediated signaling

Inositol phosphate metabolism

ErbB signaling pathway

Chemokine signaling pathway

Phosphatidylinositol signaling system

mTOR signaling pathway

Apoptosis

VEGF signaling pathway

Focal adhesion

Toll-like receptor signaling pathway

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Insulin signaling pathway

Type II diabetes mellitus

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Chronic myeloid leukemia

Acute myeloid leukemia

Small cell lung cancer

Non-small cell lung cancer

228566_at -0.342 5.756 -2.543 2.233e-02 0.293 -3.404 RPRD1A regulation of nuclear pre-mRNA domain containing 1A 18 -31823789 AA778694 18q12.2 Hs.464912 3    
213765_at -0.954 7.777 -2.543 2.234e-02 0.293 -3.404 MFAP5 microfibrillar associated protein 5 12 -8689806 AW665892 12p13.1-p12.3 Hs.512842 9

microfibril

extracellular matrix structural constituent

extracellular region

proteinaceous extracellular matrix

 
1557136_at 0.307 4.183 2.543 2.234e-02 0.293 -3.404 ATP13A4 ATPase type 13A4 3 -194602559 BG059633 3q29 Hs.674423 4

nucleotide binding

magnesium ion binding

ATP binding

ATP biosynthetic process

cation transport

ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism

membrane

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

ATPase activity

 
211121_s_at 0.268 5.071 2.543 2.235e-02 0.293 -3.404 DOK1 docking protein 1, 62kDa (downstream of tyrosine kinase 1) 2 74635367 AF180527 2p13 Hs.103854 52

insulin receptor binding

protein binding

cell surface receptor linked signal transduction

transmembrane receptor protein tyrosine kinase signaling pathway

 
226436_at -0.791 6.226 -2.543 2.235e-02 0.293 -3.404 RASSF4 Ras association (RalGDS/AF-6) domain family member 4 10 44775224 N49935 10q11.21 Hs.522895 9

protein binding

cell cycle

signal transduction

 
1569335_a_at 0.367 5.044 2.542 2.237e-02 0.293 -3.405 STRA6 stimulated by retinoic acid gene 6 homolog (mouse) 15 -72273783, -72258862, -72258862, -72258862 BC015881 15q24.1 Hs.24553 13

receptor activity

plasma membrane

transport

integral to membrane

protein complex

 
209919_x_at 0.306 5.464 2.542 2.237e-02 0.293 -3.405 GGT1 gamma-glutamyltransferase 1 22 23309717, 23329179, 23333654 L20490 22q11.23 Hs.595809 Hs.645535 71

molecular_function

gamma-glutamyltransferase activity

protein binding

cellular amino acid metabolic process

glutathione biosynthetic process

acyltransferase activity

membrane

integral to membrane

transferase activity

Taurine and hypotaurine metabolism

Selenoamino acid metabolism

Cyanoamino acid metabolism

Glutathione metabolism

Arachidonic acid metabolism

Metabolic pathways

1555844_s_at -0.427 8.515 -2.542 2.237e-02 0.293 -3.405 HNRNPM heterogeneous nuclear ribonucleoprotein M 19 8415802 AL713781 19p13.3-p13.2 Hs.465808 Hs.666214 28

nucleotide binding

nuclear mRNA splicing, via spliceosome

nuclear mRNA splicing, via spliceosome

RNA binding

nucleus

spliceosomal complex

nucleolus

integral to plasma membrane

RNA splicing

protein domain specific binding

 
227186_s_at 0.569 11.233 2.542 2.239e-02 0.293 -3.406 MRPL41 mitochondrial ribosomal protein L41 9 139566129 AI090841 9q34.3 Hs.44017 10

structural constituent of ribosome

mitochondrion

mitochondrial large ribosomal subunit

ribosome

translation

apoptosis

cell cycle

 
203584_at 0.257 9.146 2.541 2.240e-02 0.293 -3.406 TTC35 tetratricopeptide repeat domain 35 8 109525028 NM_014673 8q23.1 Hs.654351 9

binding

nucleus

endoplasmic reticulum

 
225315_at 0.404 8.929 2.541 2.241e-02 0.293 -3.407 MRPL21 mitochondrial ribosomal protein L21 11 -68415321 BF344406 11q13.3 Hs.503047 6

RNA binding

structural constituent of ribosome

intracellular

mitochondrion

ribosome

translation

 
1553113_s_at -0.683 5.357 -2.541 2.242e-02 0.293 -3.407 CDK8 cyclin-dependent kinase 8 13 25726755 BF700678 13q12 Hs.382306 38

nucleotide binding

cyclin-dependent protein kinase activity

protein binding

ATP binding

nucleus

protein amino acid phosphorylation

RNA polymerase II carboxy-terminal domain kinase activity

transferase activity

regulation of transcription

 
200065_s_at -0.392 9.894 -2.540 2.244e-02 0.293 -3.408 ARF1 ADP-ribosylation factor 1 1 226336983, 226337473 AF052179 1q42 Hs.286221 97

Golgi membrane

nucleotide binding

GTPase activity

receptor signaling protein activity

protein binding

GTP binding

intracellular

Golgi apparatus

cytosol

cytosol

plasma membrane

retrograde vesicle-mediated transport, Golgi to ER

small GTPase mediated signal transduction

protein transport

membrane organization

vesicle-mediated transport

sarcomere

COPI coating of Golgi vesicle

Vibrio cholerae infection

1555620_a_at 0.238 6.581 2.540 2.246e-02 0.294 -3.409 PTGIR prostaglandin I2 (prostacyclin) receptor (IP) 19 -51815564 BC017857 19q13.3 Hs.458324 55

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein signaling, coupled to cyclic nucleotide second messenger

cell-cell signaling

Neuroactive ligand-receptor interaction

Vascular smooth muscle contraction

1555760_a_at -0.357 6.166 -2.539 2.250e-02 0.294 -3.410 RBM15 RNA binding motif protein 15 1 110683467 AF364037 1p13 Hs.435947 Hs.708172 13

nucleotide binding

RNA binding

protein binding

nucleus

negative regulation of transcription

interspecies interaction between organisms

 
1569629_x_at 0.212 4.124 2.539 2.250e-02 0.294 -3.410 LOC389906 similar to Serine/threonine-protein kinase PRKX (Protein kinase PKX1) X   BC017231 Xp22.33 Hs.636199 Hs.684492 1    
244680_at 0.373 3.784 2.539 2.250e-02 0.294 -3.410 GLRB glycine receptor, beta 4 158216726 AI701428 4q31.3 Hs.32973 14

startle response

ion channel activity

extracellular ligand-gated ion channel activity

protein binding

membrane fraction

plasma membrane

integral to plasma membrane

ion transport

chloride transport

neuropeptide signaling pathway

synaptic transmission

acrosome reaction

nervous system development

visual perception

adult walking behavior

glycine binding

extracellular-glycine-gated chloride channel activity

cell junction

neurotransmitter receptor activity

chloride ion binding

chloride channel complex

regulation of membrane potential

synapse

postsynaptic membrane

synaptic transmission, glycinergic

righting reflex

Neuroactive ligand-receptor interaction

213198_at -0.278 8.138 -2.539 2.250e-02 0.294 -3.411 ACVR1B activin A receptor, type IB 12 50631752, 50631752, 50631752 AL117643 12q13 Hs.438918 39

G1/S transition of mitotic cell cycle

nucleotide binding

magnesium ion binding

in utero embryonic development

hair follicle development

protein serine/threonine kinase activity

receptor activity

ATP binding

integral to plasma membrane

induction of apoptosis

signal transduction

transmembrane receptor protein serine/threonine kinase signaling pathway

embryonic development

cell surface

membrane

activin receptor activity, type I

transferase activity

peptidyl-threonine phosphorylation

growth factor binding

manganese ion binding

negative regulation of cell growth

ubiquitin protein ligase binding

positive regulation of activin receptor signaling pathway

regulation of transcription

positive regulation of erythrocyte differentiation

SMAD binding

protein amino acid autophosphorylation

activin binding

MAPK signaling pathway

Cytokine-cytokine receptor interaction

Endocytosis

TGF-beta signaling pathway

Adherens junction

Pathways in cancer

Colorectal cancer

Pancreatic cancer

Chronic myeloid leukemia

203526_s_at -0.683 4.157 -2.539 2.251e-02 0.294 -3.411 APC adenomatous polyposis coli 5 112071116, 112101454 M74088 5q21-q22 Hs.158932 386

cytokinesis after mitosis

kinetochore

kidney development

hair follicle development

nucleus

cytoplasm

centrosome

cytosol

cytoplasmic microtubule

protein complex assembly

response to DNA damage stimulus

negative regulation of microtubule depolymerization

cell cycle arrest

mitotic metaphase/anaphase transition

mitotic cell cycle spindle assembly checkpoint

axonogenesis

beta-catenin binding

microtubule binding

axis specification

anterior/posterior pattern formation

dorsal/ventral pattern formation

proximal/distal pattern formation

lateral plasma membrane

protein kinase regulator activity

protein kinase binding

negative regulation of Wnt receptor signaling pathway

positive regulation of cell migration

growth cone

positive regulation of epithelial cell differentiation

beta-catenin destruction complex

positive regulation of microtubule polymerization

cell projection membrane

positive regulation of pseudopodium assembly

T cell differentiation in the thymus

axon part

Axin-APC-beta-catenin-GSK3B complex

somatic stem cell maintenance

negative regulation of odontogenesis

cell projection

positive regulation of apoptosis

negative regulation of apoptosis

negative regulation of MAPKKK cascade

skin development

regulation of osteoblast differentiation

regulation of osteoclast differentiation

positive regulation of protein catabolic process

negative regulation of cyclin-dependent protein kinase activity

positive regulation of cell adhesion

muscle maintenance

thymus development

negative regulation of epithelial cell proliferation

regulation of nitrogen compound metabolic process

chromosome organization

regulation of cell cycle

positive regulation of cell division

regulation of attachment of spindle microtubules to kinetochore

retina development in camera-type eye

Wnt receptor signaling pathway through beta-catenin

Wnt receptor signaling pathway through beta-catenin

Wnt signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Colorectal cancer

Endometrial cancer

Basal cell carcinoma

229799_s_at -0.761 4.985 -2.539 2.251e-02 0.294 -3.411 NCAM1 neural cell adhesion molecule 1 11 112337204, 112337204 AI569787 11q23.1 Hs.503878 120

protein binding

extracellular region

plasma membrane

cell adhesion

integral to membrane

anchored to membrane

Cell adhesion molecules (CAMs)

Prion diseases

236937_at -0.488 5.404 -2.539 2.251e-02 0.294 -3.411 VPS8 vacuolar protein sorting 8 homolog (S. cerevisiae) 3 186012624 BF108423 3q27.2 Hs.269263 6

protein binding

zinc ion binding

metal ion binding

 
229969_at -0.382 5.585 -2.539 2.252e-02 0.294 -3.411 SEC63 SEC63 homolog (S. cerevisiae) 6 -108295652 AV723931 6q21 Hs.26904 14

receptor activity

endoplasmic reticulum

protein folding

protein targeting to membrane

protein transport

membrane

integral to membrane

heat shock protein binding

unfolded protein binding

 
212009_s_at -0.932 6.851 -2.539 2.253e-02 0.294 -3.411 STIP1 stress-induced-phosphoprotein 1 11 63710162 AL553320 11q13 Hs.337295 34

protein binding

nucleus

cytoplasm

Golgi apparatus

response to stress

Prion diseases

241754_at 0.330 3.117 2.538 2.254e-02 0.294 -3.412 SCAI suppressor of cancer cell invasion 9 -126744710 AA829836 9q33.3 Hs.59504 4

transcription corepressor activity

protein binding

protein binding

nucleus

cytoplasm

negative regulation of signal transduction

membrane

integral to membrane

negative regulation of cell migration

negative regulation of Rho protein signal transduction

regulation of transcription

 
219500_at 0.308 5.973 2.538 2.254e-02 0.294 -3.412 CLCF1 cardiotrophin-like cytokine factor 1 11 -66888214 NM_013246 11q13.3 Hs.502977 13

cytokine activity

extracellular region

extracellular space

JAK-STAT cascade

growth factor activity

cytokine-mediated signaling pathway

B cell differentiation

positive regulation of tyrosine phosphorylation of Stat3 protein

negative regulation of apoptosis

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

203921_at 0.294 4.537 2.538 2.257e-02 0.294 -3.413 CHST2 carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2 3 144321357 NM_004267 3q24 Hs.8786 19

N-acetylglucosamine 6-O-sulfotransferase activity

Golgi apparatus

trans-Golgi network

carbohydrate metabolic process

N-acetylglucosamine metabolic process

sulfur metabolic process

inflammatory response

multicellular organismal development

membrane

integral to membrane

transferase activity

intrinsic to Golgi membrane

Keratan sulfate biosynthesis

Metabolic pathways

208616_s_at -0.517 10.542 -2.537 2.259e-02 0.294 -3.414 PTP4A2 protein tyrosine phosphatase type IVA, member 2 1 -32146379 U48297 1p35 Hs.470477 Hs.712749 Hs.713025 21

prenylated protein tyrosine phosphatase activity

protein binding

cytoplasm

early endosome

plasma membrane

protein amino acid dephosphorylation

hydrolase activity

 
213673_x_at 0.332 5.375 2.537 2.259e-02 0.294 -3.414 NENF neuron derived neurotrophic factor 1 210672851 AA156251 1q32.3 Hs.461787 7

extracellular region

extracellular space

growth factor activity

heme binding

positive regulation of MAPKKK cascade

metal ion binding

 
219193_at -0.270 6.677 -2.537 2.259e-02 0.294 -3.414 WDR70 WD repeat domain 70 5 37415168 NM_018034 5p13.2 Hs.213690 2    
200087_s_at -0.564 9.470 -2.536 2.262e-02 0.294 -3.415 TMED2 transmembrane emp24 domain trafficking protein 2 12 122635028 AK024976 12q24.31 Hs.592682 Hs.75914 10

protein binding

microsome

ER-Golgi intermediate compartment

Golgi apparatus

protein transport

membrane

integral to membrane

vesicle-mediated transport

cytoplasmic vesicle

zymogen granule membrane

 
201464_x_at -0.486 9.248 -2.536 2.264e-02 0.294 -3.416 JUN jun oncogene 1 -59019050 BG491844 1p32-p31 Hs.714791 443

nuclear chromosome

transcription factor activity

RNA polymerase II transcription factor activity

Rho GTPase activator activity

nucleus

transcription factor complex

cytosol

regulation of transcription, DNA-dependent

transforming growth factor beta receptor signaling pathway

SMAD protein nuclear translocation

transcription factor binding

negative regulation of cell proliferation

cellular process

promoter binding

negative regulation of protein amino acid autophosphorylation

leading edge cell differentiation

response to drug

positive regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

protein dimerization activity

regulation of cell cycle

SMAD protein signal transduction

R-SMAD binding

MAPK signaling pathway

ErbB signaling pathway

Wnt signaling pathway

Focal adhesion

Toll-like receptor signaling pathway

T cell receptor signaling pathway

B cell receptor signaling pathway

Neurotrophin signaling pathway

GnRH signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

213615_at -0.288 5.452 -2.536 2.265e-02 0.294 -3.416 LPCAT3 lysophosphatidylcholine acyltransferase 3 12 -6955607 AA773554 12p13 Hs.655248 15

endoplasmic reticulum

acyltransferase activity

phospholipid biosynthetic process

membrane

integral to membrane

transferase activity

1-acylglycerophosphocholine O-acyltransferase activity

 
218172_s_at -0.650 5.866 -2.536 2.266e-02 0.294 -3.417 DERL1 Der1-like domain family, member 1 8 -124094748 NM_018630 8q24.13 Hs.241576 28

receptor activity

protein binding

endoplasmic reticulum

endoplasmic reticulum

response to unfolded protein

protein transport

membrane

integral to membrane

intracellular transport of viral proteins in host cell

integral to endoplasmic reticulum membrane

ER-associated protein catabolic process

endoplasmic reticulum unfolded protein response

retrograde protein transport, ER to cytosol

MHC class I protein binding

interspecies interaction between organisms

Amyotrophic lateral sclerosis (ALS)

209103_s_at -0.355 8.232 -2.535 2.268e-02 0.294 -3.417 UFD1L ubiquitin fusion degradation 1 like (yeast) 22 -17817463 BC001049 22q11.21 Hs.474213 22

skeletal system development

ubiquitin-specific protease activity

protein binding

nucleus

cytoplasm

cytosol

ubiquitin-dependent protein catabolic process

 
230802_at -0.636 3.816 -2.535 2.269e-02 0.295 -3.418 ARHGAP24 Rho GTPase activating protein 24 4 86615307, 86918874, 87070449 AI761947 4q21.23-q21.3 Hs.444229 14

angiogenesis

GTPase activator activity

protein binding

intracellular

cytoplasm

cytoskeleton

adherens junction

focal adhesion

signal transduction

multicellular organismal development

cell junction

cell differentiation

cell projection

 
224775_at -0.284 6.417 -2.534 2.271e-02 0.295 -3.419 IWS1 IWS1 homolog (S. cerevisiae) 2 -127954852 AW451291 2q14.3 Hs.469879 12

nucleus

 
219412_at 0.496 3.756 2.534 2.275e-02 0.295 -3.420 RAB38 RAB38, member RAS oncogene family 11 -87486078 NM_022337 11q14 Hs.591975 10

nucleotide binding

GTPase activity

protein binding

GTP binding

cellular_component

soluble fraction

insoluble fraction

cytoplasm

endoplasmic reticulum

Golgi apparatus

cytosol

plasma membrane

organelle organization

small GTPase mediated signal transduction

protein transport

melanosome

vesicular fraction

 
222127_s_at -0.445 7.527 -2.534 2.275e-02 0.295 -3.420 EXOC1 exocyst complex component 1 4 56414572 AK023461 4q12 Hs.269665 13

exocyst

exocytosis

protein transport

 
221191_at 0.261 4.968 2.534 2.275e-02 0.295 -3.420 STAG3L1 stromal antigen 3-like 1 7 74826382 NM_018991 7q11.23-q21.1 Hs.632310 Hs.661254 Hs.709564 2    
202900_s_at -0.459 7.026 -2.533 2.279e-02 0.295 -3.422 NUP88 nucleoporin 88kDa 17 -5230143 NM_002532 17p13.2 Hs.584784 24

transporter activity

nucleus

nuclear pore

cytosol

protein transport

mRNA transport

intracellular protein transmembrane transport

 
224884_at -0.600 6.762 -2.533 2.280e-02 0.295 -3.422 AKAP13 A kinase (PRKA) anchor protein 13 15 83724874, 84021271 AW575773 15q24-q25 Hs.459211 Hs.710656 38

cAMP-dependent protein kinase activity

signal transducer activity

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

protein binding

cellular_component

intracellular

membrane fraction

nucleus

cytoplasm

intracellular signaling cascade

biological_process

zinc ion binding

membrane

diacylglycerol binding

regulation of Rho protein signal transduction

metal ion binding

 
218577_at -0.415 7.135 -2.533 2.280e-02 0.295 -3.422 LRRC40 leucine rich repeat containing 40 1 -70383084 NM_017768 1p31.1 Hs.147836 6

protein binding

 
212158_at -0.733 6.984 -2.532 2.281e-02 0.295 -3.423 SDC2 syndecan 2 8 97575057 AL577322 8q22-q23 Hs.1501 Hs.598247 72

molecular_function

integral to plasma membrane

cytoskeletal protein binding

biological_process

membrane

ECM-receptor interaction

Cell adhesion molecules (CAMs)

212065_s_at -0.692 4.912 -2.532 2.283e-02 0.295 -3.424 USP34 ubiquitin specific peptidase 34 2 -61268093 AW502434 2p15 Hs.644708 9

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
221199_at 0.387 5.818 2.532 2.284e-02 0.295 -3.424 GFRA4 GDNF family receptor alpha 4 20 -3587938 NM_022139 20p13-p12 Hs.302025 7

receptor activity

extracellular region

plasma membrane

anchored to membrane

 
235707_at -0.462 4.079 -2.532 2.284e-02 0.295 -3.424 LOC221710 hypothetical protein LOC221710 6 11202251 AW994270 6p24.2 Hs.656600 1    
215766_at 0.355 5.191 2.531 2.285e-02 0.295 -3.424 GSTA1 glutathione S-transferase alpha 1 6 -52764137 AL096729 6p12.1 Hs.446309 104

glutathione transferase activity

cytoplasm

glutathione metabolic process

metabolic process

transferase activity

Glutathione metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

202010_s_at -0.302 6.534 -2.531 2.286e-02 0.295 -3.424 ZNF410 zinc finger protein 410 14 73423338 NM_021188 14q24.3 Hs.270869 9

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
210275_s_at -0.632 10.431 -2.531 2.286e-02 0.295 -3.425 ZFAND5 zinc finger, AN1-type domain 5 9 -74156160 AF062347 9q13-q21 Hs.406096 6

in utero embryonic development

vasculature development

respiratory system process

molecular_function

DNA binding

cellular_component

biological_process

zinc ion binding

fibroblast migration

metal ion binding

platelet-derived growth factor receptor signaling pathway

skeletal system morphogenesis

smooth muscle tissue development

face development

 
207148_x_at -1.120 11.243 -2.531 2.287e-02 0.295 -3.425 MYOZ2 myozenin 2 4 120276386 NM_016599 4q26-q27 Hs.381047 16

protein binding

cytoplasm

biological_process

actin cytoskeleton

sarcomere

Z disc

protein phosphatase 2B binding

 
1553314_a_at 0.243 3.026 2.531 2.287e-02 0.295 -3.425 KIF19 kinesin family member 19 17 69833945 NM_153209 17q25.1 Hs.372773 6

nucleotide binding

microtubule motor activity

ATP binding

microtubule

microtubule-based movement

 
217760_at -0.302 7.070 -2.531 2.287e-02 0.295 -3.425 TRIM44 tripartite motif-containing 44 11 35640928 AA176780 11p13 Hs.192103 10

intracellular

zinc ion binding

metal ion binding

 
203138_at -0.484 8.667 -2.531 2.287e-02 0.295 -3.425 HAT1 histone acetyltransferase 1 2 172487180 NM_003642 2q31.2-q33.1 Hs.632532 14

histone acetyltransferase activity

protein binding

nucleus

cytoplasm

DNA packaging

chromatin silencing at telomere

internal protein amino acid acetylation

acyltransferase activity

chromatin modification

histone acetylation

transferase activity

 
202979_s_at -0.678 5.176 -2.531 2.288e-02 0.295 -3.425 CREBZF CREB/ATF bZIP transcription factor 11 -85046257 NM_021212 11q14 Hs.535319 Hs.595940 Hs.714910 12

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

response to virus

negative regulation of transcription

specific transcriptional repressor activity

sequence-specific DNA binding

negative regulation of gene expression, epigenetic

regulation of transcription factor activity

 
240337_at 0.279 3.597 2.531 2.289e-02 0.295 -3.426 RHOA ras homolog gene family, member A 3 -49371582 AW173151 3p21.3 Hs.247077 Hs.709788 348

nucleotide binding

magnesium ion binding

cell morphogenesis

GTPase activity

protein binding

GTP binding

intracellular

nucleus

cytoplasm

cytoskeleton

plasma membrane

regulation of transcription from RNA polymerase II promoter

cell adhesion

cell-matrix adhesion

small GTPase mediated signal transduction

Rho protein signal transduction

skeletal muscle tissue development

myosin binding

actin cytoskeleton organization

cell differentiation

positive regulation of NF-kappaB import into nucleus

positive regulation of I-kappaB kinase/NF-kappaB cascade

negative regulation of neuron apoptosis

interspecies interaction between organisms

negative regulation of neuron differentiation

positive regulation of neuron differentiation

positive regulation of stress fiber formation

Chemokine signaling pathway

Vascular smooth muscle contraction

Wnt signaling pathway

TGF-beta signaling pathway

Axon guidance

Focal adhesion

Adherens junction

Tight junction

T cell receptor signaling pathway

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Pathogenic Escherichia coli infection - EHEC

Pathways in cancer

227768_at -0.376 6.822 -2.530 2.289e-02 0.295 -3.426 ZNF407 zinc finger protein 407 18 70471906, 70471906, 70471906 AB051490 18q23 Hs.536490 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
208097_s_at -0.715 5.000 -2.530 2.291e-02 0.295 -3.426 TMX1 thioredoxin-related transmembrane protein 1 14 50776635 NM_030755 14q22.1 Hs.125221 10

membrane fraction

nucleus

endoplasmic reticulum

endoplasmic reticulum membrane

DNA replication

transport

ER to Golgi vesicle-mediated transport

anti-apoptosis

response to stress

signal transduction

cell proliferation

disulfide oxidoreductase activity

membrane

integral to membrane

electron transport chain

arsenate reductase (thioredoxin) activity

leukocyte activation

cell redox homeostasis

positive regulation of transcription, DNA-dependent

positive regulation of growth

 
242469_at 0.257 5.067 2.530 2.291e-02 0.295 -3.426 LOC120376 Uncharacterized protein LOC120376 11 110675185 AI590055 11q23.1 Hs.31409 6    
205643_s_at 0.378 3.264 2.530 2.292e-02 0.295 -3.427 PPP2R2B protein phosphatase 2 (formerly 2A), regulatory subunit B, beta isoform 5 -145949260, -145949260, -145949260, -145949260, -145949260 NM_004576 5q31-q32 Hs.655213 48

protein phosphatase type 2A complex

signal transduction

cell death

protein phosphatase type 2A regulator activity

Tight junction

227539_at -0.796 5.704 -2.530 2.293e-02 0.295 -3.427 GNA13 guanine nucleotide binding protein (G protein), alpha 13 17 -60435870 AW298099 17q24.3 Hs.515018 57

nucleotide binding

patterning of blood vessels

in utero embryonic development

GTPase activity

signal transducer activity

protein binding

GTP binding

cell motion

signal transduction

G-protein coupled receptor protein signaling pathway

protein kinase cascade

Rho protein signal transduction

regulation of cell shape

membrane

guanyl nucleotide binding

cell differentiation

platelet activation

regulation of cell migration

melanosome

Vascular smooth muscle contraction

Long-term depression

Regulation of actin cytoskeleton

233736_at 0.322 4.279 2.530 2.293e-02 0.295 -3.427 OR51J1 olfactory receptor, family 51, subfamily J, member 1 (gene/pseudogene) 11   AF137396 11p15.4   1

receptor activity

olfactory receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

sensory perception of smell

integral to membrane

response to stimulus

 
218618_s_at -0.547 5.976 -2.530 2.294e-02 0.295 -3.427 FNDC3B fibronectin type III domain containing 3B 3 173240111, 173241037 NM_022763 3q26.31 Hs.159430 9

endoplasmic reticulum

membrane

integral to membrane

 
229805_at 0.286 5.187 2.529 2.294e-02 0.295 -3.428 ZDHHC22 zinc finger, DHHC-type containing 22 14 -76667365 AI363193 14q24.3 Hs.525485 5

zinc ion binding

acyltransferase activity

membrane

integral to membrane

transferase activity

metal ion binding

 
204361_s_at 0.860 4.788 2.529 2.295e-02 0.295 -3.428 SKAP2 src kinase associated phosphoprotein 2 7 -26673212 AB014486 7p21-p15 Hs.200770 Hs.644804 19

SH3/SH2 adaptor activity

cytoplasm

plasma membrane

protein complex assembly

signal transduction

negative regulation of cell proliferation

B cell activation

 
209362_at -0.504 7.983 -2.529 2.296e-02 0.295 -3.428 MED21 mediator complex subunit 21 12 27066749 AI688580 12p11.23 Hs.286145 27

blastocyst development

RNA polymerase II transcription factor activity

transcription coactivator activity

DNA-directed RNA polymerase activity

protein binding

nucleus

DNA-directed RNA polymerase II, core complex

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

 
213996_at -0.822 5.660 -2.529 2.298e-02 0.296 -3.429 YPEL1 yippee-like 1 (Drosophila) 22 -20381825 NM_013313 22q11.2 Hs.517436 7

nucleus

 
224635_s_at -0.464 7.802 -2.528 2.299e-02 0.296 -3.430 BIRC6 baculoviral IAP repeat-containing 6 2 32435599 AI017106 2p22-p21 Hs.150107 14

ubiquitin-protein ligase activity

cysteine-type endopeptidase inhibitor activity

protein binding

cellular_component

intracellular

membrane fraction

apoptosis

anti-apoptosis

positive regulation of cell proliferation

ligase activity

modification-dependent protein catabolic process

peptidase inhibitor activity

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

209067_s_at -0.381 9.175 -2.528 2.300e-02 0.296 -3.430 HNRPDL heterogeneous nuclear ribonucleoprotein D-like 4 -83563370 D89092 4q13-q21 Hs.527105 14

nucleotide binding

DNA binding

double-stranded DNA binding

single-stranded DNA binding

RNA binding

protein binding

nucleus

cytoplasm

RNA processing

poly(A) RNA binding

heterogeneous nuclear ribonucleoprotein complex

regulation of transcription

 
219203_at 0.256 8.086 2.528 2.301e-02 0.296 -3.430 FAM158A family with sequence similarity 158, member A 14 -23678013 NM_016049 14q11.2 Hs.271614 4    
208030_s_at -0.328 9.705 -2.528 2.302e-02 0.296 -3.431 ADD1 adducin 1 (alpha) 4 2815381 NM_001119 4p16.3 Hs.183706 Hs.701490 139

calmodulin binding

nucleus

cytoplasm

cytosol

cytoskeleton

plasma membrane

transcription factor binding

F-actin capping protein complex

actin cytoskeleton organization

spectrin binding

positive regulation of protein binding

protein homodimerization activity

metal ion binding

protein heterodimerization activity

actin filament binding

barbed-end actin filament capping

actin filament bundle formation

 
211581_x_at 0.411 5.299 2.528 2.302e-02 0.296 -3.431 LST1 leukocyte specific transcript 1 6 31661949, 31662603, 3000093, 3000747, 2801557, 2802211 AF000426 6p21.3 Hs.436066 20

cell morphogenesis

molecular_function

protein binding

cytoplasm

Golgi apparatus

immune response

regulation of cell shape

anatomical structure morphogenesis

membrane

integral to membrane

dendrite development

negative regulation of lymphocyte proliferation

 
211036_x_at -0.362 9.183 -2.528 2.302e-02 0.296 -3.431 ANAPC5 anaphase promoting complex subunit 5 12 -120230432, -120230432 BC006301 12q24.31 Hs.7101 28

G2/M transition of mitotic cell cycle

mitotic anaphase

ubiquitin-protein ligase activity

binding

nucleoplasm

anaphase-promoting complex

cytosol

ubiquitin-dependent protein catabolic process

cell cycle

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

cell division

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

206329_at 0.573 6.287 2.527 2.304e-02 0.296 -3.431 EXTL1 exostoses (multiple)-like 1 1 26220857 NM_004455 1p36.1 Hs.150956 11

skeletal system development

protein binding

endoplasmic reticulum

membrane

integral to membrane

transferase activity, transferring hexosyl groups

intrinsic to endoplasmic reticulum membrane

glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity

Heparan sulfate biosynthesis

Metabolic pathways

203802_x_at -0.273 7.104 -2.527 2.305e-02 0.296 -3.432 NSUN5 NOL1/NOP2/Sun domain family, member 5 7 -72355161 NM_018044 7q11.23 Hs.647060 9

methyltransferase activity

transferase activity

 
243179_at 0.677 4.889 2.527 2.305e-02 0.296 -3.432 LOC100130360 hypothetical LOC100130360 6   BG231554 6p22.3        
204685_s_at -1.288 7.048 -2.527 2.306e-02 0.296 -3.432 ATP2B2 ATPase, Ca++ transporting, plasma membrane 2 3 -10340706 R52647 3p25.3 Hs.268942 30

nucleotide binding

magnesium ion binding

calcium-transporting ATPase activity

calcium ion binding

calmodulin binding

ATP binding

cytoplasm

plasma membrane

ATP biosynthetic process

cation transport

calcium ion transport

sensory perception of sound

metabolic process

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

neuron differentiation

Calcium signaling pathway

227326_at -0.502 6.757 -2.526 2.309e-02 0.296 -3.434 MXRA7 matrix-remodelling associated 7 17 -72187245, -72183403 BE966768 17q25.1 Hs.250723 Hs.597019 Hs.707692 4

membrane

integral to membrane

 
218187_s_at -0.253 6.176 -2.526 2.310e-02 0.296 -3.434 C8orf33 chromosome 8 open reading frame 33 8 146248627 NM_023080 8q24.3 Hs.169615 3    
226718_at -0.408 6.567 -2.525 2.313e-02 0.296 -3.435 AMIGO1 adhesion molecule with Ig-like domain 1 1 -109850968 AA001423 1p13.3 Hs.709892 5

protein binding

cell adhesion

homophilic cell adhesion

heterophilic cell adhesion

multicellular organismal development

nervous system development

axonal fasciculation

membrane

integral to membrane

cell differentiation

axon

myelination

cell projection

positive regulation of axonogenesis

 
203743_s_at -0.461 7.018 -2.525 2.313e-02 0.296 -3.435 TDG thymine-DNA glycosylase 12 102883722 NM_003211 12q24.1 Hs.584809 47

damaged DNA binding

protein binding

nucleus

nucleoplasm

nucleoplasm

base-excision repair

mismatch repair

response to DNA damage stimulus

metabolic process

pyrimidine-specific mismatch base pair DNA N-glycosylase activity

DNA N-glycosylase activity

mismatched DNA binding

depyrimidination

Base excision repair

1558486_at 0.475 5.671 2.525 2.313e-02 0.296 -3.435 ZNF493 zinc finger protein 493 19 21371760, 21371760 BC022394 19p12 Hs.656558 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
203877_at 0.446 4.230 2.525 2.313e-02 0.296 -3.435 MMP11 matrix metallopeptidase 11 (stromelysin 3) 22 22445035 NM_005940 22q11.2 22q11.23 Hs.143751 30

metalloendopeptidase activity

calcium ion binding

extracellular region

proteinaceous extracellular matrix

proteolysis

multicellular organismal development

peptidase activity

zinc ion binding

collagen catabolic process

 
209233_at -0.423 7.508 -2.525 2.316e-02 0.296 -3.436 EMG1 EMG1 nucleolar protein homolog (S. cerevisiae) 12 6950204 U72514 12p13 Hs.558447 13

nucleus

nucleolus

small nucleolar ribonucleoprotein complex

rRNA processing

 
203465_at -0.673 8.070 -2.524 2.318e-02 0.297 -3.437 MRPL19 mitochondrial ribosomal protein L19 2 75727416 NM_014763 2q11.1-q11.2 Hs.44024 11

structural constituent of ribosome

intracellular

nucleus

mitochondrion

ribosome

translation

nuclear membrane

 
207922_s_at -0.295 7.479 -2.524 2.318e-02 0.297 -3.437 MAEA macrophage erythroblast attacher 4 1273671 NM_005882 4p16.3 Hs.139896 5

actin binding

membrane fraction

nucleus

cytoplasm

spindle

contractile ring

cytoskeleton

plasma membrane

integral to plasma membrane

cell cycle

cell adhesion

regulation of mitotic cell cycle

nuclear matrix

negative regulation of myeloid cell apoptosis

erythrocyte maturation

cell division

 
208447_s_at -0.506 6.415 -2.523 2.324e-02 0.297 -3.439 PRPS1 phosphoribosyl pyrophosphate synthetase 1 X 106758309 NM_002764 Xq21.32-q24 Hs.56 26

nucleotide binding

magnesium ion binding

ribose phosphate diphosphokinase activity

ribose phosphate diphosphokinase activity

ribose phosphate diphosphokinase activity

ATP binding

cytosol

purine base metabolic process

purine nucleotide biosynthetic process

pyrimidine nucleotide biosynthetic process

nervous system development

nucleoside metabolic process

ribonucleoside monophosphate biosynthetic process

kinase activity

transferase activity

urate biosynthetic process

protein homodimerization activity

hypoxanthine biosynthetic process

Pentose phosphate pathway

Purine metabolism

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of plant hormones

Metabolic pathways

210044_s_at 0.378 6.381 2.522 2.326e-02 0.297 -3.440 LYL1 lymphoblastic leukemia derived sequence 1 19 -13070846 BC002796 19p13.2 Hs.46446 15

DNA binding

nucleus

transcription regulator activity

regulation of transcription

 
230603_at 0.331 5.193 2.522 2.328e-02 0.297 -3.441 COL27A1 collagen, type XXVII, alpha 1 9 115958051 W94813 9q32 Hs.494892 8

extracellular matrix structural constituent

extracellular region

collagen

cell adhesion

 
230263_s_at -0.975 3.961 -2.522 2.328e-02 0.297 -3.441 DOCK5 dedicator of cytokinesis 5 8 25098203 BF447954 8p21.2 Hs.195403 7

guanyl-nucleotide exchange factor activity

cytoplasm

 
213172_at -0.555 3.701 -2.522 2.329e-02 0.297 -3.441 TTC9 tetratricopeptide repeat domain 9 14 70178256 AW235608 14q24.2 Hs.79170 5

binding

protein folding

 
1555970_at 0.324 4.814 2.522 2.330e-02 0.298 -3.442 FBXO28 F-box protein 28 1 222368413 AU154086 1q42.11 Hs.64691 Hs.713992 10

modification-dependent protein catabolic process

 
207654_x_at -0.434 6.634 -2.521 2.331e-02 0.298 -3.442 DR1 down-regulator of transcription 1, TBP-binding (negative cofactor 2) 1 93584065 NM_001938 1p22.1 Hs.348418 23

negative regulation of transcription from RNA polymerase II promoter

transcription corepressor activity

intracellular

nucleus

transcription factor binding

sequence-specific DNA binding

regulation of transcription

 
230973_at 0.263 4.992 2.521 2.331e-02 0.298 -3.442 SH2D5 SH2 domain containing 5 1 -20918811 AI937119 1p36.12 Hs.591522 2

protein binding

 
224846_at 0.264 5.271 2.521 2.333e-02 0.298 -3.442 SHKBP1 SH3KBP1 binding protein 1 19 45774596 AI348000 19q13.2 Hs.26506 7

voltage-gated potassium channel activity

protein binding

potassium ion transport

voltage-gated potassium channel complex

membrane

 
1557123_a_at 0.264 4.982 2.521 2.333e-02 0.298 -3.443 CHADL chondroadherin-like 22 -39955459 BC040188 22q13.2 Hs.344488 Hs.714982 2

protein binding

extracellular region

proteinaceous extracellular matrix

 
1557170_at 0.265 5.687 2.521 2.334e-02 0.298 -3.443 NEK8 NIMA (never in mitosis gene a)- related kinase 8 17 24079958 AI073943 17q11.1 Hs.448468 8

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

transferase activity

 
206734_at -0.444 5.692 -2.521 2.334e-02 0.298 -3.443 JRKL jerky homolog-like (mouse) 11 95762805 NM_003772 11q21 Hs.105940 4

DNA binding

nucleus

central nervous system development

regulation of transcription

 
224418_x_at 0.257 4.398 2.520 2.335e-02 0.298 -3.443 PMCHL1 pro-melanin-concentrating hormone-like 1 5 22178217 AY008407 5p14.3 Hs.247975 6    
219730_at -0.538 4.784 -2.520 2.336e-02 0.298 -3.444 MED18 mediator complex subunit 18 1 28528099 NM_017638 1p35.3 Hs.479911 6

nucleus

regulation of transcription from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

identical protein binding

regulation of transcription

 
231987_at 0.345 6.030 2.520 2.337e-02 0.298 -3.444 LOC728264 hypothetical LOC728264 5 148766632 AW081196 5q32 Hs.519666 1    
225619_at -0.499 3.022 -2.520 2.338e-02 0.298 -3.444 SLAIN1 SLAIN motif family, member 1 13 77170470, 77213295 AV730849 13q22.3 Hs.349955 4    
200945_s_at -0.253 8.771 -2.520 2.339e-02 0.298 -3.445 SEC31A SEC31 homolog A (S. cerevisiae) 4 -83958837 NM_014933 4q21.22 Hs.370024 20

cytoplasm

endoplasmic reticulum

ER to Golgi vesicle-mediated transport

ER to Golgi vesicle-mediated transport

protein transport

membrane

membrane organization

vesicle-mediated transport

COPII vesicle coat

cytoplasmic vesicle

calcium-dependent protein binding

perinuclear region of cytoplasm

response to calcium ion

 
208366_at 0.351 3.531 2.520 2.339e-02 0.298 -3.445 PCDH11X protocadherin 11 X-linked X 90920959, 90976314, 90976314 NM_014522 Xq21.3 Hs.655673 16

calcium ion binding

protein binding

plasma membrane

integral to plasma membrane

cell adhesion

homophilic cell adhesion

 
227226_at 0.327 4.460 2.520 2.339e-02 0.298 -3.445 MRAP2 melanocortin 2 receptor accessory protein 2 6 84800138 AA418816 6q14.2 Hs.370055 8    
214160_at 0.214 3.926 2.519 2.340e-02 0.298 -3.445 CDK6 cyclin-dependent kinase 6 7 -92072172, -92072172 AI738463 7q21-q22 Hs.119882 95

G1 phase of mitotic cell cycle

nucleotide binding

cyclin-dependent protein kinase holoenzyme complex

ruffle

positive regulation of cell-matrix adhesion

cyclin-dependent protein kinase activity

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

regulation of gene expression

regulation of gene expression

transferase activity

hemopoiesis

cyclin binding

gliogenesis

cell dedifferentiation

regulation of erythrocyte differentiation

negative regulation of osteoblast differentiation

negative regulation of cell cycle

positive regulation of fibroblast proliferation

negative regulation of epithelial cell proliferation

cell division

Cell cycle

p53 signaling pathway

Pathways in cancer

Pancreatic cancer

Glioma

Melanoma

Chronic myeloid leukemia

Small cell lung cancer

Non-small cell lung cancer

1561038_at 0.314 4.114 2.519 2.341e-02 0.298 -3.446 ZNF81 zinc finger protein 81 X 47581244 BC039609 Xp11.23 Hs.114246 5

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
225585_at -0.763 7.662 -2.519 2.342e-02 0.298 -3.446 RAP2A RAP2A, member of RAS oncogene family 13 96884475 AI963476 13q34 Hs.508480 34

nucleotide binding

GTPase activity

protein binding

GTP binding

intracellular

plasma membrane

signal transduction

small GTPase mediated signal transduction

 
226604_at -0.373 5.815 -2.519 2.343e-02 0.298 -3.447 TMTC3 transmembrane and tetratricopeptide repeat containing 3 12 87060203 AA418403 12q21.32 Hs.331268 7

binding

membrane

integral to membrane

 
229441_at -0.478 5.489 -2.518 2.347e-02 0.298 -3.448 PRSS23 protease, serine, 23 11 86189138 AI569872 11q14.1 Hs.25338 13

serine-type endopeptidase activity

extracellular region

nucleus

proteolysis

peptidase activity

 
215379_x_at 0.652 6.110 2.518 2.347e-02 0.298 -3.448 IGL@ immunoglobulin lambda locus 22   AV698647 22q11.1-q11.2 Hs.449585 Hs.561078 20    
220834_at 0.265 2.996 2.518 2.349e-02 0.298 -3.449 MS4A12 membrane-spanning 4-domains, subfamily A, member 12 11 60016826 NM_017716 11q12 Hs.272789 7

receptor activity

signal transduction

membrane

integral to membrane

 
219461_at 0.289 4.916 2.517 2.349e-02 0.298 -3.449 PAK6 p21 protein (Cdc42/Rac)-activated kinase 6 15 38296920, 38319326 AJ236915 15q14 Hs.513645 13

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

transferase activity

ErbB signaling pathway

Axon guidance

Focal adhesion

T cell receptor signaling pathway

Regulation of actin cytoskeleton

Renal cell carcinoma

201414_s_at -0.332 7.696 -2.517 2.350e-02 0.298 -3.449 NAP1L4 nucleosome assembly protein 1-like 4 11 -2922235 NM_005969 11p15.5 Hs.501684 Hs.695395 12

nucleus

chromatin assembly complex

cytoplasm

nucleosome assembly

unfolded protein binding

 
203265_s_at -0.449 5.678 -2.517 2.351e-02 0.298 -3.449 MAP2K4 mitogen-activated protein kinase kinase 4 17 11864859 AA810268 17p11.2 Hs.514681 92

nucleotide binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

signal transduction

JNK cascade

transferase activity

MAPK signaling pathway

ErbB signaling pathway

Toll-like receptor signaling pathway

Fc epsilon RI signaling pathway

GnRH signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

238338_at 0.275 3.867 2.517 2.353e-02 0.298 -3.450 DCAF8 DDB1 and CUL4 associated factor 8 1 -158475636, -158475636, -158452128, -158452128 AL134577 1q22-q23 Hs.632447 10

protein binding

 
200895_s_at -0.448 8.114 -2.517 2.353e-02 0.298 -3.450 FKBP4 FK506 binding protein 4, 59kDa 12 2774368 NM_002014 12p13.33 Hs.524183 Hs.713721 47

peptidyl-prolyl cis-trans isomerase activity

ATP binding

GTP binding

FK506 binding

intracellular

nucleus

nucleolus

cytoplasm

protein folding

steroid hormone receptor complex assembly

copper ion transport

embryo implantation

isomerase activity

protein binding, bridging

heat shock protein binding

protein complex localization

glucocorticoid receptor binding

male sex differentiation

phosphoprotein binding

 
226322_at -0.535 8.258 -2.517 2.353e-02 0.298 -3.450 TMTC1 transmembrane and tetratricopeptide repeat containing 1 12 -29545023 BF109231 12p11.22 Hs.401954 3

binding

membrane

integral to membrane

 
203721_s_at -0.636 7.769 -2.516 2.354e-02 0.298 -3.451 UTP18 UTP18, small subunit (SSU) processome component, homolog (yeast) 17 46692895 NM_016001 17q21.33 Hs.709327 11

nucleus

nucleolus

small nucleolar ribonucleoprotein complex

rRNA processing

 
206208_at 0.395 6.232 2.516 2.355e-02 0.298 -3.451 CA4 carbonic anhydrase IV 17 55582083 NM_000717 17q23 Hs.89485 30

carbonate dehydratase activity

membrane fraction

plasma membrane

one-carbon metabolic process

visual perception

zinc ion binding

lyase activity

anchored to membrane

metal ion binding

response to stimulus

Nitrogen metabolism

242918_at -0.873 4.860 -2.516 2.355e-02 0.298 -3.451 NASP nuclear autoantigenic sperm protein (histone-binding) 1 45822303 AU144734 1p34.1 Hs.319334 28

blastocyst development

protein binding

nucleus

cytoplasm

DNA replication

cell cycle

cell proliferation

protein transport

histone exchange

Hsp90 protein binding

 
221534_at -0.299 7.863 -2.516 2.357e-02 0.298 -3.452 C11orf68 chromosome 11 open reading frame 68 11 -65440859 AF073483 11q13.1 Hs.433573 6    
228230_at 0.242 5.044 2.515 2.360e-02 0.299 -3.453 PRIC285 peroxisomal proliferator-activated receptor A interacting complex 285 20 -61659882, -61659882 AL121829 20q13.33 Hs.517180 9

nucleotide binding

DNA binding

transcription coactivator activity

RNA binding

helicase activity

ribonuclease activity

ATP binding

intracellular

nucleus

zinc ion binding

hydrolase activity

regulation of transcription

metal ion binding

 
227161_at -0.464 5.309 -2.515 2.360e-02 0.299 -3.453 NOM1 nucleolar protein with MIF4G domain 1 7 156435177 AI419857 7q36.3 Hs.15825 6

protein binding

nucleus

nucleolus

biological_process

RNA metabolic process

 
202548_s_at -0.269 8.324 -2.515 2.361e-02 0.299 -3.453 ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7 13 110565624, 110604061, 110637173 NM_003899 13q34 Hs.508738 49

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

intracellular

cytosol

intracellular signaling cascade

regulation of Rho protein signal transduction

Regulation of actin cytoskeleton

203567_s_at -0.519 6.397 -2.515 2.361e-02 0.299 -3.453 TRIM38 tripartite motif-containing 38 6 26071049 AU157590 6p21.3 Hs.584851 7

signal transducer activity

protein binding

cellular_component

intracellular

zinc ion binding

positive regulation of I-kappaB kinase/NF-kappaB cascade

metal ion binding

 
231816_s_at 0.304 4.612 2.515 2.362e-02 0.299 -3.453 UBE2Q1 ubiquitin-conjugating enzyme E2Q family member 1 1 -152787674 AI986085 1q21.3 Hs.607928 7

nucleotide binding

ubiquitin-protein ligase activity

protein binding

ATP binding

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

235291_s_at 0.370 4.037 2.515 2.362e-02 0.299 -3.454 FLJ32255 hypothetical protein LOC643977 5   BE875232 5p12 Hs.535791 1    
211743_s_at 0.315 4.175 2.515 2.363e-02 0.299 -3.454 PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) 11 -56911409 BC005929 11q12 Hs.512633 51

binding

sugar binding

extracellular region

immune response

heparin binding

defense response to bacterium

Asthma

1554485_s_at 0.451 3.900 2.514 2.364e-02 0.299 -3.454 TMEM37 transmembrane protein 37 2 119905915 BI825302 2q14.2 Hs.26216 3

voltage-gated ion channel activity

calcium channel activity

calcium ion binding

ion transport

calcium ion transport

membrane

integral to membrane

 
239052_at 0.257 3.990 2.514 2.365e-02 0.299 -3.455 HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 4 -83493490 AW968636 4q21.1-q21.2 Hs.480073 64

nucleotide binding

nuclear mRNA splicing, via spliceosome

DNA binding

RNA binding

RNA binding

protein binding

nucleus

chromosome

regulation of transcription, DNA-dependent

RNA processing

RNA catabolic process

biological_process

transcription activator activity

heterogeneous nuclear ribonucleoprotein complex

telomeric DNA binding

 
213035_at -0.641 7.921 -2.514 2.365e-02 0.299 -3.455 ANKRD28 ankyrin repeat domain 28 3 -15683747 AI081194 3p25.1 Hs.335239 10

protein binding

nucleus

nucleoplasm

 
1552418_at 0.357 4.589 2.514 2.366e-02 0.299 -3.455 TTLL10 tubulin tyrosine ligase-like family, member 10 1 1099148, 1104939 NM_153254 1p36.33 Hs.454835 4

tubulin-tyrosine ligase activity

cytoplasm

cytoskeleton

microtubule

protein modification process

ligase activity

protein polyglycylation

protein-glycine ligase activity

 
221712_s_at -0.352 6.915 -2.513 2.368e-02 0.299 -3.456 WDR74 WD repeat domain 74 11 -62356959 BC006351 11q12.3 Hs.655372 7

molecular_function

nucleus

nucleolus

biological_process

 
240033_at 0.433 6.080 2.513 2.371e-02 0.299 -3.457 PLG plasminogen 6 161043263 BF447999 6q26 Hs.143436 198

serine-type endopeptidase activity

calcium ion binding

extracellular region

extracellular region

extracellular space

proteolysis

induction of apoptosis

blood coagulation

peptidase activity

negative regulation of cell proliferation

negative regulation of angiogenesis

apolipoprotein binding

negative regulation of blood vessel endothelial cell migration

tissue remodeling

negative regulation of fibrinolysis

positive regulation of fibrinolysis

Neuroactive ligand-receptor interaction

Complement and coagulation cascades

212997_s_at -0.385 6.715 -2.513 2.372e-02 0.299 -3.458 TLK2 tousled-like kinase 2 17 57910117 AU151689 17q23 Hs.445078 10

nucleotide binding

regulation of chromatin assembly or disassembly

protein serine/threonine kinase activity

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

nucleus

protein amino acid phosphorylation

response to DNA damage stimulus

cell cycle

intracellular signaling cascade

chromatin modification

transferase activity

 
238356_at 0.276 2.791 2.512 2.373e-02 0.299 -3.458 DOCK11 dedicator of cytokinesis 11 X 117513899 AW968823 Xq24 Hs.368203 4

guanyl-nucleotide exchange factor activity

GTP binding

GTPase binding

 
213400_s_at -0.466 6.514 -2.512 2.375e-02 0.299 -3.458 TBL1X transducin (beta)-like 1X-linked X 9391334, 9393200 AV753028 Xp22.3 Hs.495656 16

nucleus

signal transduction

visual perception

sensory perception of sound

modification-dependent protein catabolic process

regulation of transcription

Wnt signaling pathway

213646_x_at -0.599 10.324 -2.512 2.375e-02 0.299 -3.459 TUBA1B tubulin, alpha 1b 12 -47807832 BE300252 12q13.12 Hs.524390 Hs.719075 42

nucleotide binding

microtubule cytoskeleton organization

GTPase activity

structural constituent of cytoskeleton

protein binding

GTP binding

microtubule

microtubule-based movement

protein complex

protein polymerization

Gap junction

Pathogenic Escherichia coli infection - EHEC

215174_at 0.256 3.911 2.512 2.377e-02 0.299 -3.459 FMO6P flavin containing monooxygenase 6 pseudogene 1 169373502 AL021026 1q24.3 Hs.448988 4

monooxygenase activity

flavin-containing monooxygenase activity

endoplasmic reticulum

microsome

membrane

integral to membrane

intrinsic to endoplasmic reticulum membrane

FAD binding

NADP or NADPH binding

oxidation reduction

 
218757_s_at -0.443 7.156 -2.511 2.377e-02 0.299 -3.459 UPF3B UPF3 regulator of nonsense transcripts homolog B (yeast) X -118852016 NM_023010 Xq25-q26 Hs.103832 26

nucleotide binding

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

nuclear mRNA splicing, via spliceosome

RNA binding

nucleocytoplasmic transporter activity

protein binding

nucleus

cytoplasm

transport

mRNA transport

 
209366_x_at 0.349 7.625 2.511 2.378e-02 0.299 -3.460 CYB5A cytochrome b5 type A (microsomal) 18 -70071506 M22865 18q23 Hs.465413 38

aldo-keto reductase activity

cytochrome-c oxidase activity

cytoplasm

mitochondrion

mitochondrial outer membrane

endoplasmic reticulum

microsome

transport

membrane

integral to membrane

heme binding

electron transport chain

metal ion binding

 
223051_at -0.310 9.444 -2.511 2.379e-02 0.299 -3.460 SSU72 SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) 1 -1466915 AF277178 1p36.33 Hs.30026 Hs.657061 7

phosphoprotein phosphatase activity

nucleus

cytoplasm

mRNA processing

hydrolase activity

 
228494_at -0.590 6.754 -2.511 2.379e-02 0.299 -3.460 PPP1R9A protein phosphatase 1, regulatory (inhibitor) subunit 9A 7 94374884 AI888150 7q21.3 Hs.21816 12

actin binding

protein binding

cytoplasm

cytoskeleton

actin filament organization

multicellular organismal development

nervous system development

synaptosome

cell junction

cell differentiation

filopodium

cortical actin cytoskeleton

dendritic spine

synapse

 
200991_s_at -0.500 7.593 -2.511 2.379e-02 0.299 -3.460 SNX17 sorting nexin 17 2 27446892 NM_014748 2p23-p22 Hs.278569 18

receptor binding

cytoplasm

early endosome

Golgi apparatus

cholesterol catabolic process

intracellular protein transport

receptor-mediated endocytosis

signal transduction

protein C-terminus binding

membrane

endosome transport

regulation of endocytosis

phosphoinositide binding

low-density lipoprotein receptor binding

 
1568849_at 0.268 4.289 2.511 2.379e-02 0.299 -3.460 C21orf135 chromosome 21 open reading frame 135 21   BC009635 21q22.3 Hs.382029 2    
224600_at -0.614 6.679 -2.511 2.379e-02 0.299 -3.460 CGGBP1 CGG triplet repeat binding protein 1 3 -88183789 BE501318 3p12-p11.1 Hs.444818 14

DNA binding

double-stranded DNA binding

nucleus

regulation of transcription

 
208250_s_at 0.256 6.100 2.511 2.379e-02 0.299 -3.460 DMBT1 deleted in malignant brain tumors 1 10 124310170 NM_004406 10q26.13 Hs.279611 60

scavenger receptor activity

scavenger receptor activity

extracellular region

cytoplasm

multicellular organismal development

pattern recognition receptor activity

response to virus

protein transport

membrane

phagocytic vesicle membrane

epithelial cell differentiation

epithelial cell differentiation

induction of bacterial agglutination

interspecies interaction between organisms

innate immune response

calcium-dependent protein binding

 
233470_at 0.314 5.140 2.511 2.380e-02 0.299 -3.460 PTPN5 protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched) 11 -18706050 U27831 11p15.1 Hs.79092 10

protein tyrosine phosphatase activity

protein amino acid dephosphorylation

integral to membrane

hydrolase activity

MAPK signaling pathway

203757_s_at 0.241 3.672 2.511 2.381e-02 0.299 -3.461 CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) 19 46951237 BC005008 19q13.2 Hs.466814 45

plasma membrane

plasma membrane

integral to plasma membrane

signal transduction

cell-cell signaling

anchored to membrane

 
205344_at 0.308 5.517 2.511 2.382e-02 0.299 -3.461 CSPG5 chondroitin sulfate proteoglycan 5 (neuroglycan C) 3 -47578731 NM_006574 3p21.3 Hs.45127 9

protein binding

protein binding

membrane fraction

endoplasmic reticulum

Golgi apparatus

plasma membrane

integral to plasma membrane

multicellular organismal development

nervous system development

growth factor activity

cell differentiation

Golgi-associated vesicle membrane

regulation of growth

intracellular transport

 
222389_s_at -0.284 7.428 -2.510 2.383e-02 0.299 -3.462 WAC WW domain containing adaptor with coiled-coil 10 28861432, 28862429 BE879807   Hs.714700 15

protein binding

nucleus

nuclear speck

 
1553167_a_at -0.485 3.497 -2.509 2.387e-02 0.299 -3.463 SEPSECS Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase 4 -24730725 BC023539 4p15.2 Hs.253305 Hs.597198 10

tRNA binding

selenocysteine incorporation

protein binding

nucleus

cytoplasm

translation

selenium binding

transferase activity

selenotransferase activity

Aminoacyl-tRNA biosynthesis

1569905_at -0.242 5.528 -2.509 2.388e-02 0.299 -3.463 HSD11B1L hydroxysteroid (11-beta) dehydrogenase 1-like 19 5632034, 5632046, 5632051, 5632074 BC018336 19p13.3 Hs.631840 2

binding

extracellular region

oxidoreductase activity

oxidation reduction

 
1561041_at 0.255 4.272 2.509 2.388e-02 0.299 -3.464 TNRC6C trinucleotide repeat containing 6C 17 73511912 BM459591 17q25.3 Hs.569831 Hs.584945 10

nucleotide binding

RNA binding

regulation of translation

gene silencing by RNA

 
37577_at 0.241 3.649 2.509 2.389e-02 0.299 -3.464 ARHGAP19 Rho GTPase activating protein 19 10 -98971919 U79256 10q24.1 Hs.80305 8

GTPase activator activity

intracellular

nucleus

signal transduction

 
209498_at 0.323 5.401 2.509 2.389e-02 0.299 -3.464 CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 19 -47703297 X16354 19q13.2 Hs.512682 97

angiogenesis

molecular_function

extracellular region

membrane fraction

plasma membrane

plasma membrane

integral to plasma membrane

homophilic cell adhesion

integrin-mediated signaling pathway

cell migration

 
202266_at -0.389 8.082 -2.509 2.389e-02 0.299 -3.464 TTRAP TRAF and TNF receptor associated protein 6 -24758183 NM_016614 6p22.3-p22.1 Hs.716397 14

transcription corepressor activity

protein binding

nucleus

cell surface receptor linked signal transduction

 
223228_at -0.459 7.426 -2.509 2.389e-02 0.299 -3.464 LDOC1L leucine zipper, down-regulated in cancer 1-like 22 -43267113 AL136553 22q13.31 Hs.715637 6    
215035_at 0.427 4.889 2.509 2.390e-02 0.299 -3.464 IGLV6-57 immunoglobulin lambda variable 6-57 22   AI952772 22q11.2 Hs.535668 6    
220018_at -0.655 4.402 -2.509 2.391e-02 0.299 -3.464 CBLL1 Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1 7 107171514 NM_024814 7q22.3-q31.1 Hs.592271 9

protein binding

intracellular

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
222561_at -0.344 7.060 -2.508 2.394e-02 0.300 -3.465 LANCL2 LanC lantibiotic synthetase component C-like 2 (bacterial) 7 55400634 AJ278245 7q31.1-q31.33 Hs.595384 Hs.655117 9

catalytic activity

ATP binding

GTP binding

nucleus

cytoplasm

cytosol

plasma membrane

negative regulation of transcription

 
239192_at 0.272 3.399 2.508 2.394e-02 0.300 -3.466 PARD3B par-3 partitioning defective 3 homolog B (C. elegans) 2 205118760 BF434006 2q33.3 Hs.657382 11

protein binding

tight junction

cell cycle

membrane

cell junction

cell division

 
211714_x_at -0.729 9.583 -2.508 2.394e-02 0.300 -3.466 TUBB tubulin, beta 6 30796135, 2136731, 1935034 BC005838 6p21.33 Hs.636480 Hs.706187 Hs.714425 39

nucleotide binding

GTPase activity

structural constituent of cytoskeleton

GTP binding

cytoskeleton

microtubule

cell motion

microtubule-based movement

flotillin complex

natural killer cell mediated cytotoxicity

MHC class I protein binding

spindle assembly

protein polymerization

Gap junction

Pathogenic Escherichia coli infection - EHEC

221487_s_at -0.859 7.202 -2.508 2.396e-02 0.300 -3.466 ENSA endosulfine alpha 1 -148866145, -148862377, -148862377, -148861222, -148861222 AF157510 1q21.3 Hs.632456 15

receptor binding

cytoplasm

transport

response to nutrient

ion channel inhibitor activity

 
210317_s_at -0.448 5.845 -2.507 2.399e-02 0.300 -3.467 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 17 -1194585 U28936 17p13.3 Hs.513851 87

neuron migration

cytoplasm

mitochondrion

protein targeting

intracellular signaling cascade

enzyme binding

protein domain specific binding

hippocampus development

cerebral cortex development

negative regulation of protein amino acid dephosphorylation

melanosome

interspecies interaction between organisms

Cell cycle

Neurotrophin signaling pathway

213624_at -0.561 8.799 -2.507 2.399e-02 0.300 -3.467 SMPDL3A sphingomyelin phosphodiesterase, acid-like 3A 6 123151669 AA873600 6q22.31 Hs.486357 5

sphingomyelin phosphodiesterase activity

protein binding

extracellular region

extracellular space

sphingomyelin catabolic process

metabolic process

hydrolase activity, acting on glycosyl bonds

 
205022_s_at -0.489 8.479 -2.507 2.400e-02 0.300 -3.468 FOXN3 forkhead box N3 14 -88692268, -88692268 NM_005197 14q31.3 Hs.434286 Hs.621371 16

DNA damage checkpoint

G2 phase of mitotic cell cycle

transcription factor activity

nucleus

cell cycle

protein C-terminus binding

transcription repressor activity

sequence-specific DNA binding

negative regulation of transcription, DNA-dependent

 
238036_at 0.328 4.866 2.507 2.400e-02 0.300 -3.468 SHE Src homology 2 domain containing E 1 -152718582 AI760776 1q21.3 Hs.591481 5

protein binding

 
208715_at -0.254 7.162 -2.506 2.402e-02 0.300 -3.469 TMCO1 transmembrane and coiled-coil domains 1 1 -163960151 BF002031 1q22-q25 Hs.31498 Hs.715707 12

endoplasmic reticulum

Golgi apparatus

membrane

integral to membrane

 
242157_at -0.566 4.464 -2.506 2.403e-02 0.300 -3.469 CHD9 chromodomain helicase DNA binding protein 9 16 51646445 AW469037 16q12.2 Hs.59159 Hs.622347 10

nucleotide binding

chromatin

DNA binding

chromatin binding

helicase activity

protein binding

ATP binding

nucleus

cytoplasm

chromatin assembly or disassembly

chromatin modification

hydrolase activity

regulation of transcription

 
213100_at 0.313 5.704 2.506 2.403e-02 0.300 -3.469 UNC5B unc-5 homolog B (C. elegans) 10 72642303 AA127885 10q22.1 Hs.522997 12

receptor activity

protein binding

apoptosis

signal transduction

multicellular organismal development

membrane

integral to membrane

Axon guidance

238791_at 0.231 3.060 2.506 2.404e-02 0.300 -3.469 ZNF100 zinc finger protein 100 19 -21698682 AA282536 19p12 Hs.365142 Hs.535881 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
201090_x_at -0.585 10.198 -2.506 2.404e-02 0.300 -3.469 TUBA1B tubulin, alpha 1b 12 -47807832 NM_006082 12q13.12 Hs.524390 Hs.719075 42

nucleotide binding

microtubule cytoskeleton organization

GTPase activity

structural constituent of cytoskeleton

protein binding

GTP binding

microtubule

microtubule-based movement

protein complex

protein polymerization

Gap junction

Pathogenic Escherichia coli infection - EHEC

203657_s_at -0.428 7.547 -2.506 2.405e-02 0.300 -3.470 CTSF cathepsin F 11 -66087510 NM_003793 11q13 Hs.11590 12

cysteine-type endopeptidase activity

lysosome

proteolysis

peptidase activity

Lysosome

204476_s_at -0.432 5.336 -2.506 2.405e-02 0.300 -3.470 PC pyruvate carboxylase 11 -66372572, -66372572 NM_022172 11q13.4-q13.5 Hs.89890 26

nucleotide binding

pyruvate carboxylase activity

pyruvate carboxylase activity

ATP binding

soluble fraction

cytoplasm

mitochondrion

mitochondrial inner membrane

mitochondrial matrix

mitochondrial matrix

gluconeogenesis

oxaloacetate metabolic process

metabolic process

lipid biosynthetic process

biotin binding

ligase activity

manganese ion binding

carboxylic acid binding

metal ion binding

Citrate cycle (TCA cycle)

Pyruvate metabolism

Metabolic pathways

206295_at -1.430 4.533 -2.505 2.406e-02 0.300 -3.470 IL18 interleukin 18 (interferon-gamma-inducing factor) 11 -111519185 NM_001562 11q22.2-q22.3 Hs.83077 389

angiogenesis

response to hypoxia

signal transducer activity

cytokine activity

interleukin-1 receptor binding

extracellular region

extracellular space

immune response

cell-cell signaling

response to cold

regulation of cell adhesion

sleep

chemokine biosynthetic process

T-helper 1 type immune response

T-helper 2 type immune response

interleukin-2 biosynthetic process

interferon-gamma biosynthetic process

positive regulation of activated T cell proliferation

interleukin-13 biosynthetic process

granulocyte macrophage colony-stimulating factor biosynthetic process

Cytokine-cytokine receptor interaction

200594_x_at -0.308 9.659 -2.505 2.408e-02 0.300 -3.471 HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 1 -243080224 NM_004501 1q44 Hs.106212 47

nucleotide binding

nuclear mRNA splicing, via spliceosome

DNA binding

RNA binding

protein binding

ATP binding

nucleus

spliceosomal complex

RNA splicing

cell surface

heterogeneous nuclear ribonucleoprotein complex

 
222693_at -0.323 3.374 -2.505 2.409e-02 0.300 -3.471 FNDC3B fibronectin type III domain containing 3B 3 173240111, 173241037 BF444916 3q26.31 Hs.159430 9

endoplasmic reticulum

membrane

integral to membrane

 
231132_at 0.276 5.284 2.504 2.412e-02 0.300 -3.472 LOC348120 hypothetical protein LOC348120 15   AW002496 15q11.2 Hs.116287 1    
202852_s_at -0.335 5.190 -2.504 2.412e-02 0.300 -3.472 AAGAB alpha- and gamma-adaptin binding protein 15 -65280420 NM_024666 15q22.33-q23 Hs.254642 12

cytoplasm

protein transport

 
217249_x_at 0.430 8.979 2.504 2.413e-02 0.300 -3.473 COX7A2 cytochrome c oxidase subunit VIIa polypeptide 2 (liver) 6 -76004222 AC004544 6q12 Hs.70312 11

cytochrome-c oxidase activity

mitochondrion

mitochondrial respiratory chain

electron carrier activity

membrane

Oxidative phosphorylation

Cardiac muscle contraction

Alzheimer's disease

Parkinson's disease

Huntington's disease

238494_at -0.643 6.661 -2.504 2.413e-02 0.300 -3.473 TRAF3IP1 TNF receptor-associated factor 3 interacting protein 1 2 238893923 AI623155 2q37.3 Hs.631898 5

cytoplasm

cytoskeleton

 
221736_at -0.302 7.053 -2.504 2.413e-02 0.300 -3.473 KIAA1219 KIAA1219 20 36534899 AA156777 20q11.23 Hs.655758 9

GTPase activator activity

protein binding

intracellular

regulation of small GTPase mediated signal transduction

 
231357_at 0.313 3.699 2.504 2.414e-02 0.300 -3.473 CLEC12B C-type lectin domain family 12, member B 12 10054497, 10054497 AW003535 12p13.2 Hs.127937 3

receptor activity

binding

sugar binding

plasma membrane

integral to membrane

 
226049_at -0.240 6.671 -2.503 2.417e-02 0.300 -3.474 ERC1 ELKS/RAB6-interacting/CAST family member 1 12 970664 AI271420 12p13.3 Hs.655744 Hs.658200 19

protein binding

cytoplasm

Golgi apparatus

regulation of transcription, DNA-dependent

I-kappaB phosphorylation

multicellular organismal development

IkappaB kinase complex

protein transport

Rab GTPase binding

retrograde transport, endosome to Golgi

presynaptic membrane

leucine zipper domain binding

positive regulation of anti-apoptosis

positive regulation of NF-kappaB transcription factor activity

 
209661_at 0.369 5.987 2.503 2.417e-02 0.300 -3.474 KIFC3 kinesin family member C3 16 -56349629, -56349629 BC001211 16q13-q21 Hs.23131 10

nucleotide binding

microtubule motor activity

ATP binding

Golgi apparatus

kinesin complex

microtubule

microtubule-based movement

Golgi organization

visual perception

 
221516_s_at 0.260 7.080 2.503 2.419e-02 0.300 -3.475 SMCR7L Smith-Magenis syndrome chromosome region, candidate 7-like 22 38228229 BC002587 22q13 Hs.718449 11

mitochondrion

membrane

integral to membrane

 
221994_at -0.566 12.166 -2.503 2.419e-02 0.300 -3.475 PDLIM5 PDZ and LIM domain 5 4 95592060, 95592060 AA196325 4q22 Hs.480311 34

actin binding

protein kinase C binding

protein binding

membrane fraction

cytosol

zinc ion binding

actin cytoskeleton

Z disc

actinin binding

metal ion binding

 
208274_at 0.288 4.639 2.503 2.419e-02 0.300 -3.475 OCLM oculomedin 1 184636326 NM_022375 1q25 Hs.679230 6

visual perception

 
204821_at 0.445 4.520 2.503 2.420e-02 0.300 -3.475 BTN3A3 butyrophilin, subfamily 3, member A3 6 26548741 NM_006994 6p21.3 Hs.167741 9

membrane

integral to membrane

 
229748_x_at 0.466 6.384 2.501 2.425e-02 0.301 -3.477 LOC100132288 hypothetical protein LOC100132288 21 -103279, -493625 AI380156 21p11.2 Hs.487562 7    
204145_at -0.327 7.270 -2.501 2.429e-02 0.301 -3.479 FRG1 FSHD region gene 1 4 191098967 NM_004477 4q35 Hs.203772 11

nucleus

spliceosomal complex

nucleolus

rRNA processing

mRNA processing

RNA splicing

Cajal body

nuclear speck

 
1556411_s_at 0.277 4.028 2.500 2.430e-02 0.301 -3.479 KY kyphoscoliosis peptidase 3 -135801454 AF086360 3q22.2 Hs.146730 4

cytoplasm

cytoskeleton

peptidase activity

 
203761_at 0.413 5.123 2.500 2.433e-02 0.301 -3.480 SLA Src-like-adaptor 8 -134118154, -134118154 NM_006748 8q22.3-qter 8q24 Hs.75367 15

SH3/SH2 adaptor activity

protein binding

cytoplasm

endosome

 
204332_s_at -0.555 6.159 -2.500 2.433e-02 0.301 -3.480 AGA aspartylglucosaminidase 4 -178588917 M64073 4q32-q33 Hs.207776 36

N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity

lysosome

protein deglycosylation

hydrolase activity

protein maturation

Other glycan degradation

Lysosome

1560128_x_at 0.325 5.796 2.500 2.434e-02 0.301 -3.480 C5orf56 chromosome 5 open reading frame 56 5 131774571 AL713721 5q31.1 Hs.658288 1    
227418_at -0.699 7.214 -2.499 2.435e-02 0.301 -3.481 KIAA1826 KIAA1826 11 -105383838 AI808746 11q22 Hs.266782 8

nucleus

 
231299_at -0.288 4.575 -2.499 2.437e-02 0.301 -3.481 AGAP3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 7 150414758, 150414758 AI494590 7q36.1 Hs.647075 8

nucleotide binding

GTP binding

intracellular

cytoplasm

small GTPase mediated signal transduction

ARF GTPase activator activity

zinc ion binding

regulation of ARF GTPase activity

metal ion binding

 
1553517_at 0.354 5.268 2.499 2.437e-02 0.301 -3.482 FERD3L Fer3-like (Drosophila) 7 -19150929 AF517122 7p21.1 Hs.592168 4

DNA binding

nucleus

negative regulation of transcription

transcription repressor activity

 
219800_s_at 0.527 3.767 2.499 2.438e-02 0.301 -3.482 THNSL1 threonine synthase-like 1 (S. cerevisiae) 10 25345513 NM_024838 10p12.1 Hs.645274 6

catalytic activity

shikimate kinase activity

threonine synthase activity

ATP binding

metabolic process

threonine biosynthetic process

pyridoxal phosphate binding

 
1563743_at 0.275 3.552 2.499 2.438e-02 0.301 -3.482 C1orf180 chromosome 1 open reading frame 180 1 -84866500 AK092806 1p22.3 Hs.407054 2    
218315_s_at -0.385 7.100 -2.499 2.439e-02 0.301 -3.482 CDK5RAP1 CDK5 regulatory subunit associated protein 1 20 -31410305 NM_016408 20pter-q11.23 Hs.435952 13

catalytic activity

iron ion binding

protein binding

cellular_component

brain development

neuronal Cdc2-like kinase binding

regulation of neuron differentiation

negative regulation of cyclin-dependent protein kinase activity

metal ion binding

4 iron, 4 sulfur cluster binding

 
212833_at -0.476 8.755 -2.498 2.440e-02 0.301 -3.482 SLC25A46 solute carrier family 25, member 46 5 110102652 M74089 5q22.1 Hs.75639 5

binding

cellular_component

mitochondrion

mitochondrial inner membrane

transport

biological_process

membrane

integral to membrane

 
204545_at 1.010 5.578 2.498 2.440e-02 0.301 -3.483 PEX6 peroxisomal biogenesis factor 6 6 -43039588 NM_000287 6p21.1 Hs.656425 20

nucleotide binding

ATP binding

cytoplasm

peroxisome

peroxisomal membrane

cytosol

protein targeting to peroxisome

protein C-terminus binding

membrane

protein import into peroxisome matrix, translocation

protein complex binding

ATPase activity, coupled

protein stabilization

 
39582_at -0.583 6.985 -2.498 2.443e-02 0.301 -3.483 CYLD cylindromatosis (turban tumor syndrome) 16 49333461, 49333529 AL050166 16q12.1 Hs.578973 54

structural constituent of ribosome

ubiquitin thiolesterase activity

intracellular

cytoplasm

ribosome

cytoskeleton

translation

ubiquitin-dependent protein catabolic process

cell cycle

peptidase activity

cysteine-type peptidase activity

perinuclear region of cytoplasm

RIG-I-like receptor signaling pathway

202905_x_at -0.457 5.938 -2.498 2.443e-02 0.301 -3.484 NBN nibrin 8 -91014739 AI796269 8q21 Hs.492208 222

DNA damage checkpoint

telomere maintenance

nuclear chromosome, telomeric region

in utero embryonic development

blastocyst growth

damaged DNA binding

intracellular

nucleus

nucleoplasm

replication fork

chromosome

nucleolus

Golgi apparatus

double-strand break repair

response to DNA damage stimulus

cell cycle

cell cycle arrest

mitotic cell cycle G2/M transition DNA damage checkpoint

meiosis

transcription factor binding

cell proliferation

regulation of DNA replication initiation

DNA damage response, signal transduction by p53 class mediator

Mre11 complex

G1/S transition checkpoint

nuclear inclusion body

isotype switching

protein N-terminus binding

regulation of fibroblast proliferation

neuromuscular process controlling balance

Homologous recombination

204279_at 0.489 6.795 2.496 2.449e-02 0.302 -3.486 PSMB9 proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2) 6 32929915, 4202792, 4007991 NM_002800 6p21.3 Hs.654585 72

threonine-type endopeptidase activity

nucleus

cytoplasm

cytosol

proteasome core complex

immune response

peptidase activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

proteolysis involved in cellular protein catabolic process

Proteasome

225748_at -0.353 7.010 -2.496 2.450e-02 0.302 -3.486 LTV1 LTV1 homolog (S. cerevisiae) 6 144206200 AI458051 6q24.2 Hs.185675 2    
218574_s_at 0.405 10.510 2.496 2.451e-02 0.302 -3.486 LMCD1 LIM and cysteine-rich domains 1 3 8518510 NM_014583 3p26-p24 Hs.475353 4

negative regulation of transcription from RNA polymerase II promoter

molecular_function

transcription corepressor activity

protein binding

cellular_component

nucleus

biological_process

zinc ion binding

metal ion binding

 
235590_at -0.499 4.523 -2.496 2.451e-02 0.302 -3.486 FAM178A family with sequence similarity 178, member A 10 102662315, 102662315, 102662315 BF112155 10q24.31 Hs.447458 5    
240114_s_at 0.312 5.303 2.496 2.452e-02 0.302 -3.487 TMEM174 transmembrane protein 174 5 72504778 AI927971 5q13.2 Hs.508588 3

membrane

integral to membrane

 
210619_s_at 0.917 6.791 2.496 2.453e-02 0.302 -3.487 HYAL1 hyaluronoglucosaminidase 1 3 -50312324, -50312323, -50312323 AF173154 3p21.3-p21.2 Hs.75619 30

hyalurononglucosaminidase activity

extracellular region

extracellular space

lysosome

carbohydrate metabolic process

metabolic process

hydrolase activity, acting on glycosyl bonds

glycosaminoglycan metabolic process

Glycosaminoglycan degradation

Metabolic pathways

1568713_a_at -0.625 4.377 -2.495 2.454e-02 0.302 -3.488 TBC1D1 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 4 37569114 AI872403 4p14 Hs.176503 15

GTPase activator activity

Rab GTPase activator activity

intracellular

nucleus

regulation of Rab GTPase activity

 
219076_s_at 0.413 7.807 2.495 2.455e-02 0.302 -3.488 PXMP2 peroxisomal membrane protein 2, 22kDa 12 131774264 NM_018663 12q24.33 Hs.430299 5

protein binding

peroxisome

membrane

integral to membrane

 
201353_s_at 0.331 5.617 2.495 2.455e-02 0.302 -3.488 BAZ2A bromodomain adjacent to zinc finger domain, 2A 12 -55275646 AI653126 12q24.3-qter Hs.314263 11

chromatin silencing at rDNA

DNA binding

RNA binding

protein binding

nucleus

chromatin silencing complex

nucleolus

nucleolus organizer region

DNA methylation

chromatin remodeling

regulation of transcription, DNA-dependent

zinc ion binding

histone deacetylation

transcription regulator activity

rDNA heterochromatin

metal ion binding

histone acetyl-lysine binding

 
1553007_a_at 0.337 4.446 2.495 2.456e-02 0.302 -3.488 ODZ1 odz, odd Oz/ten-m homolog 1(Drosophila) X -123337436 NM_014253 Xq25 Hs.23796 Hs.537002 Hs.716649 13

extracellular region

integral to plasma membrane

immune response

signal transduction

nervous system development

heparin binding

negative regulation of cell proliferation

membrane

 
200829_x_at -0.366 8.477 -2.495 2.456e-02 0.302 -3.488 ZNF207 zinc finger protein 207 17 27701269 NM_003457 17q11.2 Hs.500775 7

transcription factor activity

intracellular

nucleus

nucleolus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
204674_at 0.313 6.129 2.495 2.457e-02 0.302 -3.489 LRMP lymphoid-restricted membrane protein 12 25096507 NM_006152 12p12.1 Hs.124922 9

cytoplasm

endoplasmic reticulum

endoplasmic reticulum membrane

integral to plasma membrane

vesicle targeting

vesicle fusion

membrane

 
230010_at 0.350 4.608 2.495 2.458e-02 0.302 -3.489 KIAA1853 KIAA1853 12 117903778 AA608629 12q24.23 Hs.112577 4    
222470_s_at -0.583 5.467 -2.494 2.461e-02 0.303 -3.490 UQCC ubiquinol-cytochrome c reductase complex chaperone 20 -33353794 AA033998 20q11.22 Hs.714359 16

cytoplasmic vesicle

 
1555697_at 0.307 6.924 2.494 2.463e-02 0.303 -3.491 KLK4 kallikrein-related peptidase 4 19 -56101419 AF259970 19q13.41 Hs.218366 34

serine-type endopeptidase activity

extracellular region

proteolysis

peptidase activity

zinc ion binding

metal ion binding

 
208816_x_at -0.399 8.124 -2.493 2.464e-02 0.303 -3.491 ANXA2P2 annexin A2 pseudogene 2 9 33614222 M62898 9p13 Hs.534301 2

angiogenesis

phospholipase inhibitor activity

calcium ion binding

calcium-dependent phospholipid binding

phosphatidylinositol-4,5-bisphosphate binding

extracellular region

basement membrane

cytoplasm

early endosome

cytoskeletal protein binding

collagen fibril organization

sarcolemma

melanosome

fibrinolysis

protein complex

perinuclear region of cytoplasm

 
212239_at -0.617 7.454 -2.493 2.467e-02 0.303 -3.492 PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 5 67558217, 67620007, 67622250 AI680192 5q13.1 Hs.132225 Hs.604502 321

negative regulation of cell-matrix adhesion

insulin receptor binding

insulin-like growth factor receptor binding

phosphatidylinositol binding

intracellular

cytosol

cytosol

1-phosphatidylinositol-4-phosphate 3-kinase, class IA complex

protein amino acid phosphorylation

signal transduction

insulin receptor signaling pathway

phosphoinositide 3-kinase cascade

membrane

protein phosphatase binding

B cell differentiation

positive regulation of cell migration

phosphoinositide 3-kinase regulator activity

negative regulation of apoptosis

ErbB-3 class receptor binding

insulin binding

insulin receptor substrate binding

interspecies interaction between organisms

negative regulation of osteoclast differentiation

positive regulation of glucose import

phosphoinositide phosphorylation

insulin-like growth factor receptor signaling pathway

growth hormone receptor signaling pathway

regulation of establishment of protein localization

ErbB signaling pathway

Chemokine signaling pathway

Phosphatidylinositol signaling system

mTOR signaling pathway

Apoptosis

VEGF signaling pathway

Focal adhesion

Toll-like receptor signaling pathway

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Insulin signaling pathway

Type II diabetes mellitus

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Chronic myeloid leukemia

Acute myeloid leukemia

Small cell lung cancer

Non-small cell lung cancer

226774_at -0.387 6.073 -2.493 2.467e-02 0.303 -3.492 FAM120B family with sequence similarity 120B 6 170457768 N48188 6q27 Hs.369522 7

protein binding

nucleus

cell differentiation

regulation of transcription

 
1563607_x_at -0.239 4.532 -2.493 2.468e-02 0.303 -3.493 hCG_2045089 hypothetical LOC286359 9 -99192941 AL833510 9q22.33 Hs.132262 2    
205013_s_at 0.314 5.128 2.492 2.469e-02 0.303 -3.493 ADORA2A adenosine A2a receptor 22 23153529 NM_000675 22q11.23 Hs.197029 109

adenosine receptor activity, G-protein coupled

receptor activity

G-protein coupled receptor activity

membrane fraction

plasma membrane

integral to plasma membrane

cAMP biosynthetic process

phagocytosis

apoptosis

inflammatory response

cellular defense response

signal transduction

transmembrane receptor protein tyrosine kinase signaling pathway

G-protein coupled receptor protein signaling pathway

G-protein signaling, coupled to cAMP nucleotide second messenger

activation of adenylate cyclase activity

cell-cell signaling

central nervous system development

blood coagulation

sensory perception

blood circulation

Calcium signaling pathway

Neuroactive ligand-receptor interaction

Vascular smooth muscle contraction

217644_s_at -0.700 4.807 -2.492 2.469e-02 0.303 -3.493 SOS2 son of sevenless homolog 2 (Drosophila) 14 -49653595 AI276593 14q21 Hs.291533 20

DNA binding

Rho guanyl-nucleotide exchange factor activity

protein binding

cellular_component

intracellular

regulation of Rho protein signal transduction

regulation of small GTPase mediated signal transduction

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

Dorso-ventral axis formation

Focal adhesion

Gap junction

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Insulin signaling pathway

GnRH signaling pathway

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Endometrial cancer

Glioma

Prostate cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Non-small cell lung cancer

222414_at -0.421 7.217 -2.492 2.469e-02 0.303 -3.493 MLL3 myeloid/lymphoid or mixed-lineage leukemia 3 7 -151462942 AA121529 7q36.1 Hs.647120 21

DNA binding

protein binding

nucleus

regulation of transcription, DNA-dependent

intracellular signaling cascade

methyltransferase activity

zinc ion binding

chromatin modification

transferase activity

histone-lysine N-methyltransferase activity

metal ion binding

 
212410_at -0.406 9.692 -2.492 2.471e-02 0.303 -3.494 EFHA1 EF-hand domain family, member A1 13 -20964838 AI346431 13q12.11 Hs.412103 7

calcium ion binding

 
227394_at -0.604 5.756 -2.491 2.473e-02 0.303 -3.495 NCAM1 neural cell adhesion molecule 1 11 112337204, 112337204 W94001 11q23.1 Hs.503878 120

protein binding

extracellular region

plasma membrane

cell adhesion

integral to membrane

anchored to membrane

Cell adhesion molecules (CAMs)

Prion diseases

208843_s_at -0.318 8.512 -2.491 2.474e-02 0.303 -3.495 GORASP2 golgi reassembly stacking protein 2, 55kDa 2 171493956 BC001408 2q31.1-q31.2 Hs.431317 16

protein binding

Golgi apparatus

Golgi medial cisterna

Golgi organization

membrane

 
226334_s_at -0.354 6.675 -2.491 2.475e-02 0.303 -3.495 AHSA2 AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast) 2 61258324 AW117717 2p15 Hs.655602 6

ATPase activator activity

cytoplasm

response to stress

chaperone binding

 
204696_s_at 0.257 5.147 2.491 2.476e-02 0.303 -3.495 CDC25A cell division cycle 25 homolog A (S. pombe) 3 -48173671 NM_001789 3p21 Hs.437705 89

regulation of cyclin-dependent protein kinase activity

protein tyrosine phosphatase activity

protein binding

cellular_component

intracellular

nucleoplasm

DNA replication

protein amino acid dephosphorylation

cell cycle

mitosis

cell proliferation

hydrolase activity

cell division

Cell cycle

1556377_s_at -0.509 5.956 -2.491 2.478e-02 0.303 -3.496 LMO7 LIM domain 7 13 75092570, 75232797 AF174600 13q22.2 Hs.207631 18

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

nucleus

cytoplasm

zinc ion binding

protein ubiquitination

metal ion binding

Adherens junction

236253_at 0.282 4.419 2.491 2.478e-02 0.303 -3.496 ZNF546 zinc finger protein 546 19 45194782 BE548749 19q13.2 Hs.709400 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
213918_s_at -0.357 5.516 -2.490 2.479e-02 0.303 -3.496 NIPBL Nipped-B homolog (Drosophila) 5 36912617 BF221673 5p13.2 Hs.481927 22

protein binding

nucleus

cell cycle

cohesin loading complex

maintenance of mitotic sister chromatid cohesion

 
226549_at 0.342 7.461 2.490 2.479e-02 0.303 -3.497 SBK1 SH3-binding domain kinase 1 16 28211340 BF447901 16p11.2 Hs.97837 3

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

transferase activity

 
212804_s_at -0.411 5.990 -2.490 2.480e-02 0.303 -3.497 GAPVD1 GTPase activating protein and VPS9 domains 1 9 127063931 AI797397 9q33.3 Hs.495134 9

guanyl-nucleotide exchange factor activity

GTPase activator activity

intracellular

endosome

cytosol

endocytosis

signal transduction

membrane

GTPase activating protein binding

regulation of small GTPase mediated signal transduction

regulation of protein transport

 
222532_at -0.487 6.304 -2.490 2.480e-02 0.303 -3.497 SRPRB signal recognition particle receptor, B subunit 3 135007366 BF983948 3q22.1 Hs.12152 10

nucleotide binding

receptor activity

protein binding

GTP binding

endoplasmic reticulum

membrane

integral to membrane

ribonucleoprotein complex

 
226801_s_at -0.333 8.894 -2.490 2.482e-02 0.303 -3.498 AIDA axin interactor, dorsalization associated 1 -220907977 W72220 1q41 Hs.156625 Hs.534965 Hs.707666 6

protein binding

cellular_component

multicellular organismal development

dorsal/ventral pattern formation

regulation of protein homodimerization activity

negative regulation of JNK cascade

 
213085_s_at 0.254 5.414 2.489 2.485e-02 0.304 -3.499 WWC1 WW and C2 domain containing 1 5 167651642 AB020676 5q34 Hs.484047 19

protein binding

cytoplasm

 
214587_at 0.218 2.318 2.489 2.486e-02 0.304 -3.499 COL8A1 collagen, type VIII, alpha 1 3 100840143 BE877796 3q12.3 Hs.654548 16

protein binding

extracellular region

collagen type VIII

basement membrane

cell adhesion

positive regulation of cell-substrate adhesion

camera-type eye morphogenesis

epithelial cell proliferation

 
209732_at -0.895 7.902 -2.489 2.487e-02 0.304 -3.500 CLEC2B C-type lectin domain family 2, member B 12 -9896234 BC005254 12p13-p12 Hs.85201 10

binding

sugar binding

integral to plasma membrane

membrane

 
200710_at 0.448 11.429 2.489 2.487e-02 0.304 -3.500 ACADVL acyl-Coenzyme A dehydrogenase, very long chain 17 7063876 NM_000018 17p13-p11 Hs.437178 Hs.463928 30

long-chain-acyl-CoA dehydrogenase activity

mitochondrion

mitochondrial inner membrane

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

electron carrier activity

energy derivation by oxidation of organic compounds

membrane

mitochondrial nucleoid

FAD binding

oxidation reduction

Fatty acid metabolism

Metabolic pathways

204160_s_at -0.586 7.255 -2.489 2.488e-02 0.304 -3.500 ENPP4 ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative function) 6 46205659 AW194947 6p21.1 Hs.643497 4

metabolic process

membrane

integral to membrane

hydrolase activity

 
212947_at -0.404 5.960 -2.489 2.488e-02 0.304 -3.500 SLC9A8 solute carrier family 9 (sodium/hydrogen exchanger), member 8 20 47862656 AL031685 20q13.13 Hs.444202 12

Golgi apparatus

cation transport

sodium ion transport

regulation of pH

antiporter activity

solute:hydrogen antiporter activity

sodium:hydrogen antiporter activity

membrane

integral to membrane

sodium ion binding

 
229772_at 0.289 5.237 2.489 2.488e-02 0.304 -3.500 DEFB123 defensin, beta 123 20 29492071 AA789269 20q11.1 Hs.122509 4

extracellular region

defense response to bacterium

 
231741_at 0.323 5.631 2.488 2.488e-02 0.304 -3.500 S1PR3 sphingosine-1-phosphate receptor 3 9 90796181 NM_005226 9q22.1-q22.2 Hs.585118 31

lysosphingolipid and lysophosphatidic acid receptor activity

cytokine production

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

inflammatory response

signal transduction

G-protein coupled receptor protein signaling pathway

inhibition of adenylate cyclase activity by G-protein signaling

elevation of cytosolic calcium ion concentration

positive regulation of cell proliferation

lipid binding

anatomical structure morphogenesis

regulation of interleukin-1 beta production

Neuroactive ligand-receptor interaction

214034_at -0.571 4.271 -2.488 2.489e-02 0.304 -3.500 ERAP1 endoplasmic reticulum aminopeptidase 1 5 -96135943, -96122269 AB011097 5q15 Hs.716426 40

aminopeptidase activity

interleukin-6 receptor binding

interleukin-1, Type II receptor binding

protein binding

extracellular region

cytoplasm

endoplasmic reticulum

endoplasmic reticulum lumen

cytosol

proteolysis

membrane protein ectodomain proteolysis

immune response

regulation of blood pressure

peptidase activity

metalloexopeptidase activity

zinc ion binding

response to bacterium

membrane

integral to membrane

antigen processing and presentation of endogenous peptide antigen via MHC class I

regulation of innate immune response

fat cell differentiation

positive regulation of angiogenesis

metal ion binding

 
216708_x_at 0.384 3.339 2.488 2.490e-02 0.304 -3.501 IGL@ immunoglobulin lambda locus 22   D84143 22q11.1-q11.2 Hs.449585 Hs.561078 20    
220003_at 0.213 5.856 2.488 2.491e-02 0.304 -3.501 LRRC36 leucine rich repeat containing 36 16 65918247, 65938758 NM_018296 16q22.1 Hs.125139 3

protein binding

 
1557480_a_at -0.632 9.889 -2.487 2.495e-02 0.304 -3.502 DYSFIP1 dysferlin interacting protein 1 17 -77384656 AI972007 17q25.3 Hs.454720 5    
200760_s_at -0.479 10.202 -2.487 2.495e-02 0.304 -3.502 ARL6IP5 ADP-ribosylation-like factor 6 interacting protein 5 3 69216779 N92494 3p14 Hs.518060 Hs.716493 30

protein binding

cytoplasm

endoplasmic reticulum

L-glutamate transport

membrane

integral to membrane

 
207648_at 0.420 5.522 2.487 2.495e-02 0.304 -3.502 DRP2 dystrophin related protein 2 X 100361588 NM_001939 Xq22 Hs.159291 13

calcium ion binding

protein binding

membrane fraction

cytoplasm

cytoskeleton

plasma membrane

central nervous system development

zinc ion binding

dendrite

synapse organization

 
212109_at -0.261 5.582 -2.487 2.496e-02 0.304 -3.503 HN1L hematological and neurological expressed 1-like 16 1668278 AI590869 16p13.3 Hs.513261 8

nucleus

cytoplasm

 
220358_at 0.231 5.589 2.487 2.497e-02 0.304 -3.503 BATF3 basic leucine zipper transcription factor, ATF-like 3 1 -210926381 NM_018664 1q32.3 Hs.62919 7

transcription factor activity

transcription corepressor activity

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

sequence-specific DNA binding

protein dimerization activity

 
1569616_at 0.271 3.835 2.487 2.497e-02 0.304 -3.503 LOC647309 hypothetical protein LOC647309 3 -192053219 BC031680 3q28 Hs.518490 1    
1554633_a_at -0.255 3.768 -2.487 2.497e-02 0.304 -3.503 MYT1L myelin transcription factor 1-like 2 -1771891 AF036943 2p25.3 Hs.434418 Hs.669852 7

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

nervous system development

zinc ion binding

cell differentiation

metal ion binding

 
206690_at 0.284 4.003 2.486 2.500e-02 0.304 -3.504 ACCN1 amiloride-sensitive cation channel 1, neuronal 17 -28364218, -28364218 NM_001094 17q12 Hs.368417 18

ion channel activity

protein binding

plasma membrane

integral to plasma membrane

ion transport

sodium ion transport

synaptic transmission

central nervous system development

peripheral nervous system development

amiloride-sensitive sodium channel activity

sodium ion binding

Taste transduction

223299_at 0.310 7.028 2.486 2.502e-02 0.304 -3.505 SEC11C SEC11 homolog C (S. cerevisiae) 18 54958104 AF212233 18q21.32 Hs.45107 2

endoplasmic reticulum

microsome

signal peptide processing

proteolysis

peptidase activity

membrane

integral to membrane

Protein export

219419_at -0.386 6.838 -2.486 2.502e-02 0.304 -3.505 C18orf22 chromosome 18 open reading frame 22 18 75895345 NM_024805 18q23 Hs.593610 3

mitochondrion

rRNA processing

 
217946_s_at -0.491 7.029 -2.485 2.503e-02 0.304 -3.505 SAE1 SUMO1 activating enzyme subunit 1 19 52325919, 52325954, 52325971 NM_016402 19q13.32 Hs.515500 20

ubiquitin activating enzyme activity

nucleus

protein modification process

protein C-terminus binding

protein C-terminus binding

enzyme activator activity

metabolic process

protein ubiquitination

ligase activity

modification-dependent protein catabolic process

ATP-dependent protein binding

protein heterodimerization activity

Ubiquitin mediated proteolysis

213578_at -0.367 6.972 -2.485 2.503e-02 0.304 -3.505 BMPR1A bone morphogenetic protein receptor, type IA 10 88506375 AI678679 10q22.3 Hs.524477 70

nucleotide binding

magnesium ion binding

mesoderm formation

Mullerian duct regression

positive regulation of mesenchymal cell proliferation

protein serine/threonine kinase activity

receptor activity

transforming growth factor beta receptor activity

ATP binding

plasma membrane

plasma membrane

caveola

protein amino acid phosphorylation

immune response

transforming growth factor beta receptor signaling pathway

pattern specification process

ectoderm development

heart development

dorsal/ventral axis specification

anterior/posterior pattern formation

positive regulation of pathway-restricted SMAD protein phosphorylation

integral to membrane

transferase activity

stem cell maintenance

manganese ion binding

cell differentiation

lung development

positive regulation of bone mineralization

BMP signaling pathway

BMP signaling pathway

hindlimb morphogenesis

odontogenesis of dentine-containing tooth

protein homodimerization activity

positive regulation of osteoblast differentiation

SMAD binding

mesendoderm development

embryonic morphogenesis

positive regulation of epithelial cell proliferation

negative regulation of neurogenesis

cartilage development

palate development

positive regulation of SMAD protein nuclear translocation

Cytokine-cytokine receptor interaction

TGF-beta signaling pathway

90265_at 0.277 7.023 2.485 2.505e-02 0.304 -3.506 ADAP1 ArfGAP with dual PH domains 1 7 -904062 AW050627 7p22.3 Hs.644629 22

protein binding

nucleus

cytoplasm

plasma membrane

cell surface receptor linked signal transduction

ARF GTPase activator activity

zinc ion binding

regulation of ARF GTPase activity

regulation of GTPase activity

inositol 1,3,4,5 tetrakisphosphate binding

metal ion binding

 
218369_s_at 0.297 3.468 2.485 2.506e-02 0.304 -3.506 EXOSC1 exosome component 1 10 -99185655 NM_016046 10q24 Hs.632089 14

exosome (RNase complex)

RNA binding

exonuclease activity

protein binding

nucleus

nucleolus

rRNA processing

hydrolase activity

RNA degradation

224077_at 0.282 2.711 2.484 2.509e-02 0.305 -3.507 WHSC1L1 Wolf-Hirschhorn syndrome candidate 1-like 1 8 -38293091, -38251717 AF255649 8p11.2 Hs.700599 10

protein binding

nucleus

nucleus

nucleolus

mitochondrion

methyltransferase activity

zinc ion binding

cell growth

chromatin modification

histone methylation

transferase activity

histone-lysine N-methyltransferase activity

cell differentiation

regulation of transcription

metal ion binding

Lysine degradation

222199_s_at -0.331 5.260 -2.484 2.510e-02 0.305 -3.508 BIN3 bridging integrator 3 8 -22533891 AK001289 8p21.3 Hs.718405 10

cytokinesis

barrier septum formation

protein binding

cytoplasm

cytoskeleton

actin filament organization

cell cycle

cytoskeletal adaptor activity

protein localization

protein localization

unidimensional cell growth

unidimensional cell growth

 
1552347_at -0.387 6.518 -2.484 2.511e-02 0.305 -3.508 CRYZL1 crystallin, zeta (quinone reductase)-like 1 21 -33883517 NM_145311 21q21.3 Hs.352671 9

NADPH:quinone reductase activity

binding

cytosol

zinc ion binding

oxidoreductase activity

quinone cofactor metabolic process

NADP or NADPH binding

oxidation reduction

 
210995_s_at -0.547 4.580 -2.484 2.511e-02 0.305 -3.508 TRIM23 tripartite motif-containing 23 5 -64921262 AF230399 5q12.3 Hs.792 14

Golgi membrane

nucleotide binding

GTPase activity

ubiquitin-protein ligase activity

protein binding

GTP binding

intracellular

nucleus

cytoplasm

lysosomal membrane

Golgi apparatus

small GTPase mediated signal transduction

enzyme activator activity

zinc ion binding

membrane

protein ubiquitination

GDP binding

metal ion binding

 
238842_at 0.308 5.950 2.484 2.511e-02 0.305 -3.508 C10orf12 chromosome 10 open reading frame 12 10 98731030 BE000242 10q24.1 Hs.14555 Hs.427927 5    
222421_at -0.385 8.212 -2.483 2.513e-02 0.305 -3.509 UBE2H ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) 7 -129260230 BF435617 7q32 Hs.643548 16

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ubiquitin-dependent protein catabolic process

protein ubiquitination

ligase activity

regulation of protein metabolic process

Ubiquitin mediated proteolysis

1564514_at 0.234 3.982 2.483 2.513e-02 0.305 -3.509 SNRK SNF related kinase 3 43303007 AK098414 3p22.1 Hs.476052 14

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

protein amino acid phosphorylation

transferase activity

myeloid cell differentiation

 
210829_s_at -0.484 6.766 -2.483 2.515e-02 0.305 -3.509 SSBP2 single-stranded DNA binding protein 2 5 -80751427 AF077048 5q14.1 Hs.102735 14

DNA binding

single-stranded DNA binding

protein binding

nucleus

cytoplasm

transcription regulator activity

regulation of transcription

 
218125_s_at -0.425 6.953 -2.483 2.515e-02 0.305 -3.509 CCDC25 coiled-coil domain containing 25 8 -27646751 NM_018246 8p21.1 Hs.445512 6    
221872_at 0.515 3.695 2.482 2.520e-02 0.305 -3.511 RARRES1 retinoic acid receptor responder (tazarotene induced) 1 3 -159905133, -159897590 AI669229 3q25.32 Hs.131269 11

negative regulation of cell proliferation

membrane

integral to membrane

 
209727_at 0.262 6.185 2.482 2.521e-02 0.305 -3.512 GM2A GM2 ganglioside activator 5 150612805 M76477 5q31.3-q33.1 Hs.483873 32

lipid transporter activity

cytoplasm

mitochondrion

lysosome

hydrogen:potassium-exchanging ATPase complex

lipid metabolic process

ganglioside catabolic process

lipid transport

learning or memory

oligosaccharide catabolic process

internal side of plasma membrane

phospholipase activator activity

glycolipid catabolic process

lipid storage

sphingolipid catabolic process

sphingolipid activator protein activity

beta-N-acetylgalactosaminidase activity

apical cortex

neurological system process

neuromuscular process controlling balance

positive regulation of hydrolase activity

Lysosome

207067_s_at 0.240 4.696 2.482 2.522e-02 0.305 -3.512 HDC histidine decarboxylase 15 -48321437 NM_002112 15q21-q22 Hs.1481 37

histidine decarboxylase activity

cellular amino acid and derivative metabolic process

histidine metabolic process

lyase activity

carboxylic acid metabolic process

pyridoxal phosphate binding

catecholamine biosynthetic process

Histidine metabolism

Biosynthesis of alkaloids derived from histidine and purine

Metabolic pathways

235343_at -0.831 3.146 -2.482 2.522e-02 0.305 -3.512 VASH2 vasohibin 2 1 211190509 AI961235 1q32.3 Hs.96885 5    
223314_at 0.354 5.831 2.482 2.522e-02 0.305 -3.512 TSPAN14 tetraspanin 14 10 82204017 BF025955 10q23.1 Hs.310453 5

membrane

integral to membrane

 
222103_at -0.558 8.706 -2.482 2.523e-02 0.305 -3.512 ATF1 activating transcription factor 1 12 49444085 AI434345 12q13 Hs.648565 45

transcription factor activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

sequence-specific DNA binding

protein dimerization activity

 
219353_at -0.476 7.093 -2.481 2.525e-02 0.305 -3.513 NHLRC2 NHL repeat containing 2 10 115604409 NM_017687 10q25.3 Hs.369924 Hs.594372 2

cell redox homeostasis

 
225475_at -0.394 5.946 -2.481 2.526e-02 0.305 -3.513 MIER1 mesoderm induction early response 1 homolog (Xenopus laevis) 1 67163165, 67168513 AI668786 1p31.3 Hs.652983 14

DNA binding

signal transducer activity

nucleus

cytoplasm

positive regulation of I-kappaB kinase/NF-kappaB cascade

regulation of transcription

 
235542_at -0.322 4.632 -2.480 2.528e-02 0.306 -3.514 TET3 tet oncogene family member 3 2 74126957 BF675754 2p13.1 Hs.516107 6

iron ion binding

oxidoreductase activity

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors

metal ion binding

oxidation reduction

 
234993_at -0.320 3.074 -2.480 2.529e-02 0.306 -3.514 ABHD13 abhydrolase domain containing 13 13 107668763 BE301702 13q33.3 Hs.183528 6

membrane

integral to membrane

hydrolase activity

 
1553234_at 0.215 4.780 2.480 2.530e-02 0.306 -3.515 ADAMTS18 ADAM metallopeptidase with thrombospondin type 1 motif, 18 16 -75873525 NM_139054 16q23 Hs.188746 9

metalloendopeptidase activity

extracellular region

proteinaceous extracellular matrix

proteolysis

peptidase activity

zinc ion binding

metal ion binding

 
202679_at -0.488 5.584 -2.479 2.533e-02 0.306 -3.516 NPC1 Niemann-Pick disease, type C1 18 -19365462 NM_000271 18q11-q12 Hs.464779 Hs.715623 61

protein binding

nuclear envelope

lysosome

endosome

endoplasmic reticulum

integral to plasma membrane

endocytosis

lysosomal transport

hedgehog receptor activity

bile acid metabolic process

sterol transporter activity

membrane

negative regulation of macroautophagy

cholesterol efflux

cholesterol homeostasis

cholesterol homeostasis

response to cadmium ion

perinuclear region of cytoplasm

Lysosome

225726_s_at 0.755 5.398 2.479 2.533e-02 0.306 -3.516 PLEKHH1 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 14 67069760 AB033026 14q24.1 Hs.594236 4

binding

cytoskeleton

 
230196_x_at 0.294 5.909 2.479 2.533e-02 0.306 -3.516 ARHGAP23 Rho GTPase activating protein 23 17 33867169 AI123323 17q12 Hs.374446 4

GTPase activator activity

protein binding

intracellular

signal transduction

 
1560472_at 0.273 5.328 2.479 2.534e-02 0.306 -3.516 LOC338588 hypothetical LOC338588 10 4688347 BC040895 10p15.1 Hs.121365 1    
1558249_s_at -0.516 5.476 -2.479 2.535e-02 0.306 -3.516 STX16 syntaxin 16 20 56659733, 56659733 BE878126 20q13.32 Hs.307913 14

SNAP receptor activity

cytoplasm

microsome

Golgi apparatus

intracellular protein transport

intra-Golgi vesicle-mediated transport

membrane

integral to membrane

vesicle-mediated transport

SNARE complex

retrograde transport, endosome to Golgi

SNARE interactions in vesicular transport

1555547_at 0.305 2.046 2.479 2.537e-02 0.306 -3.517 BPA-1 brain peptide A1 1   AB088847 1p31.3 Hs.684094      
202130_at -0.333 9.842 -2.479 2.537e-02 0.306 -3.517 RIOK3 RIO kinase 3 (yeast) 18 19286784 AA725102 18q11.2 Hs.445511 Hs.719109 9

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

chromosome segregation

kinase activity

transferase activity

 
206123_at 0.420 7.438 2.479 2.537e-02 0.306 -3.517 LLGL1 lethal giant larvae homolog 1 (Drosophila) 17 18069660 D50550 17p11.2 Hs.513983 14

structural molecule activity

protein binding

cytoplasm

cytoskeleton

protein complex assembly

exocytosis

protein kinase binding

cortical actin cytoskeleton

cortical actin cytoskeleton organization

maintenance of apical/basal cell polarity

Tight junction

204234_s_at -0.506 5.164 -2.478 2.540e-02 0.306 -3.518 ZNF195 zinc finger protein 195 11 -3336586 AI476267 11p15.5 Hs.386294 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
214015_at 0.305 4.071 2.478 2.540e-02 0.306 -3.518 SOCS7 suppressor of cytokine signaling 7 17 33761530 AI968839 17q12 Hs.514132 Hs.632261 16

protein binding

cellular_component

cytoplasm

plasma membrane

intracellular signaling cascade

biological_process

insulin receptor signaling pathway

negative regulation of signal transduction

protein ubiquitination

SH3 domain binding

modification-dependent protein catabolic process

regulation of growth

fat cell differentiation

Jak-STAT signaling pathway

1559244_at 0.269 3.914 2.478 2.541e-02 0.306 -3.519 FMN2 formin 2 1 238321807 AF218941 1q43 Hs.24889 7

molecular_function

actin binding

cellular_component

meiotic metaphase I

multicellular organismal development

cellular component organization

meiotic chromosome movement towards spindle pole

actin cytoskeleton organization

polar body extrusion after meiotic divisions

oogenesis

establishment of meiotic spindle localization

Dorso-ventral axis formation

201087_at -0.334 7.223 -2.478 2.542e-02 0.306 -3.519 PXN paxillin 12 -119132632, -119132632 NM_002859 12q24.31 Hs.446336 140

protein binding

cytoplasm

cytoskeleton

microtubule associated complex

plasma membrane

focal adhesion

cell adhesion

cell-matrix adhesion

signal transduction

signal complex assembly

zinc ion binding

vinculin binding

lamellipodium

cell junction

cellular response to reactive oxygen species

metal ion binding

Chemokine signaling pathway

VEGF signaling pathway

Focal adhesion

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

203389_at 0.264 5.823 2.478 2.542e-02 0.306 -3.519 KIF3C kinesin family member 3C 2 -26002958 AF035621 2p23 Hs.21611 9

nucleotide binding

microtubule motor activity

ATP binding

kinesin complex

microtubule

microtubule-based movement

 
225006_x_at 0.346 7.495 2.478 2.542e-02 0.306 -3.519 TH1L TH1-like (Drosophila) 20 56989705 AJ238379 20q13 Hs.517148 22

protein binding

nucleus

nucleoplasm

negative regulation of transcription

 
221376_at 0.323 5.608 2.478 2.542e-02 0.306 -3.519 FGF17 fibroblast growth factor 17 8 21956373 NM_003867 8p21 Hs.248192 17

extracellular region

extracellular region

extracellular space

signal transduction

cell-cell signaling

nervous system development

growth factor activity

positive regulation of cell proliferation

fibroblast growth factor receptor signaling pathway

fibroblast growth factor receptor signaling pathway

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

209758_s_at -1.221 7.000 -2.477 2.544e-02 0.306 -3.520 MFAP5 microfibrillar associated protein 5 12 -8689806 U37283 12p13.1-p12.3 Hs.512842 9

microfibril

extracellular matrix structural constituent

extracellular region

proteinaceous extracellular matrix

 
243618_s_at 0.365 8.093 2.477 2.545e-02 0.306 -3.520 ZNF827 zinc finger protein 827 4 -146901337 BF678830 4q31.21-q31.22 Hs.133916 Hs.633543 7

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
212930_at -0.580 6.527 -2.477 2.546e-02 0.306 -3.520 ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 12 -88505956 AW576457 12q21.3 Hs.506276 38

nucleotide binding

magnesium ion binding

calcium-transporting ATPase activity

calcium ion binding

calmodulin binding

ATP binding

plasma membrane

integral to plasma membrane

ATP biosynthetic process

cation transport

calcium ion transport

metabolic process

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

Calcium signaling pathway

1554077_a_at 0.364 5.760 2.477 2.546e-02 0.306 -3.520 TMEM53 transmembrane protein 53 1 -44892087 BC007521 1p34.1 Hs.22157 5

Golgi apparatus

plasma membrane

focal adhesion

integral to membrane

 
205526_s_at -0.391 7.173 -2.477 2.547e-02 0.306 -3.521 KATNA1 katanin p60 (ATPase-containing) subunit A 1 6 -149957864 NM_007044 6q25.1 Hs.450175 12

nucleotide binding

spindle pole

ATP binding

cytoplasm

centrosome

microtubule

cell cycle

mitosis

microtubule binding

microtubule-severing ATPase activity

hydrolase activity

nucleoside-triphosphatase activity

protein heterodimerization activity

cell division

interphase of mitotic cell cycle

 
225146_at -0.386 7.079 -2.477 2.547e-02 0.306 -3.521 C9orf25 chromosome 9 open reading frame 25 9 -34388181 AW005237 9p13.3 Hs.493771 8    
1553583_a_at 0.429 5.731 2.477 2.548e-02 0.306 -3.521 THRSP thyroid hormone responsive (SPOT14 homolog, rat) 11 77452554 NM_003251 11q13.5 Hs.591969 12

protein binding

nucleus

lipid metabolic process

 
229018_at -0.501 6.469 -2.476 2.548e-02 0.306 -3.521 C12orf26 chromosome 12 open reading frame 26 12 81276454 AI310001 12q21.31 Hs.506222 3    
210321_at 0.384 4.655 2.475 2.554e-02 0.307 -3.523 GZMH granzyme H (cathepsin G-like 2, protein h-CCPX) 14 -24145532 M36118 14q11.2 Hs.348264 17

serine-type endopeptidase activity

cytoplasm

proteolysis

apoptosis

peptidase activity

cytolysis

 
224641_at -0.505 9.844 -2.475 2.557e-02 0.307 -3.524 FYTTD1 forty-two-three domain containing 1 3 198960820, 198961020, 198961657 BF576005 3q29 Hs.277533 6    
224897_at -0.394 8.752 -2.474 2.558e-02 0.307 -3.524 WDR26 WD repeat domain 26 1 -222639467 BF510490 1q42.11-q42.12 Hs.497873 8

cytoplasm

 
232172_at -0.293 4.887 -2.474 2.559e-02 0.307 -3.525 LOC401577 hypothetical protein LOC401577 X, Y   AK023533 Xp22.33 Yp11.31 Hs.444541 2    
225853_at -0.489 7.011 -2.474 2.560e-02 0.307 -3.525 GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 14 -52311660 BE789346 14q22.1 Hs.702056 5

glucosamine 6-phosphate N-acetyltransferase activity

late endosome

ER-Golgi intermediate compartment

Golgi apparatus

metabolic process

acyltransferase activity

membrane

transferase activity

Amino sugar and nucleotide sugar metabolism

222142_at -0.506 3.687 -2.474 2.560e-02 0.307 -3.525 CYLD cylindromatosis (turban tumor syndrome) 16 49333461, 49333529 AK024212 16q12.1 Hs.578973 54

structural constituent of ribosome

ubiquitin thiolesterase activity

intracellular

cytoplasm

ribosome

cytoskeleton

translation

ubiquitin-dependent protein catabolic process

cell cycle

peptidase activity

cysteine-type peptidase activity

perinuclear region of cytoplasm

RIG-I-like receptor signaling pathway

212919_at -0.716 6.631 -2.474 2.561e-02 0.307 -3.525 DCP2 DCP2 decapping enzyme homolog (S. cerevisiae) 5 112340331 AV715578 5q22.2 Hs.443875 21

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

cytoplasmic mRNA processing body

RNA binding

protein binding

nucleus

cytoplasm

hydrolase activity

manganese ion binding

metal ion binding

RNA degradation

220896_at 0.246 5.006 2.473 2.565e-02 0.307 -3.527 FBXL18 F-box and leucine-rich repeat protein 18 7 -5481953 NM_024963 7p22.2 Hs.623974 Hs.706587 5

modification-dependent protein catabolic process

 
202754_at -0.482 8.357 -2.473 2.565e-02 0.307 -3.527 R3HDM1 R3H domain containing 1 2 136005552 NM_015361 2q21.3 Hs.412462 8

nucleic acid binding

 
211249_at 0.288 4.295 2.473 2.566e-02 0.307 -3.527 GPR68 G protein-coupled receptor 68 14 -90768628 U35398 14q31 Hs.8882 14

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

inflammatory response

signal transduction

G-protein coupled receptor protein signaling pathway

 
222468_at -0.294 7.535 -2.473 2.567e-02 0.307 -3.528 KIAA0319L KIAA0319-like 1 -35671678 W58365 1p34.2 Hs.456507 4

membrane

integral to membrane

 
1569677_a_at 0.244 2.454 2.473 2.568e-02 0.307 -3.528 C8orf45 chromosome 8 open reading frame 45 8 67945537, 67945537, 67946290 BC034576 8q13.1 Hs.437006 2    
209323_at -0.385 8.357 -2.472 2.569e-02 0.307 -3.528 PRKRIR protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) 11 -75738651 AF081567 11q13.5 Hs.503315 12

DNA binding

nucleus

nucleolus

response to stress

signal transduction

zinc ion binding

negative regulation of cell proliferation

metal ion binding

protein dimerization activity

 
227118_s_at 0.272 4.432 2.472 2.571e-02 0.307 -3.529 MRPS26 mitochondrial ribosomal protein S26 20 2974674 AA594308 20p13 Hs.18946 10

mitochondrion

mitochondrial small ribosomal subunit

ribosome

DNA damage response, detection of DNA damage

peptide biosynthetic process

 
209612_s_at 0.778 7.063 2.472 2.571e-02 0.307 -3.529 ADH1B alcohol dehydrogenase 1B (class I), beta polypeptide 4 -100446549 M24317 4q21-q23 Hs.4 193

alcohol dehydrogenase (NAD) activity

binding

cytoplasm

ethanol oxidation

zinc ion binding

oxidoreductase activity

metal ion binding

oxidation reduction

Glycolysis / Gluconeogenesis

Fatty acid metabolism

Tyrosine metabolism

1- and 2-Methylnaphthalene degradation

3-Chloroacrylic acid degradation

Retinol metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

Metabolic pathways

208471_at -0.388 4.720 -2.472 2.572e-02 0.307 -3.529 HPR haptoglobin-related protein 16 70654625 NM_020995 16q22.1 Hs.655361 17

catalytic activity

serine-type endopeptidase activity

extracellular region

proteolysis

hemoglobin binding

spherical high-density lipoprotein particle

 
1553166_at 0.299 4.883 2.472 2.573e-02 0.307 -3.530 CDH24 cadherin-like 24 14 -22586109 NM_144985 14q11.2 Hs.155912 4

calcium ion binding

protein binding

plasma membrane

cell-cell junction

homophilic cell adhesion

integral to membrane

 
224703_at -0.370 7.580 -2.471 2.574e-02 0.307 -3.530 DCAF5 DDB1 and CUL4 associated factor 5 14 -68587390 AI814644 14q23-q24.1 Hs.509780 6    
214285_at 0.940 9.920 2.471 2.574e-02 0.307 -3.530 FABP3 fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor) 1 -31610686 AI041520 1p33-p32 Hs.657242 35

transporter activity

cytoplasm

phosphatidylcholine biosynthetic process

transport

negative regulation of cell proliferation

lipid binding

PPAR signaling pathway

228833_s_at 0.283 3.670 2.471 2.575e-02 0.307 -3.530 LOC400027 hypothetical protein LOC400027 12   BE963456 12q12 Hs.597122 1    
223288_at -0.881 8.835 -2.471 2.575e-02 0.307 -3.530 USP38 ubiquitin specific peptidase 38 4 144325519 AW977401   Hs.480848 7

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
1563321_s_at 0.352 4.279 2.471 2.576e-02 0.307 -3.531 MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 10 21863107, 21863579 AF272384 10p12 Hs.30385 19

transcription factor activity

protein binding

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
204294_at 0.340 7.196 2.470 2.579e-02 0.308 -3.532 AMT aminomethyltransferase 3 -49429214 NM_000481 3p21.2-p21.1 Hs.102 17

aminomethyltransferase activity

cytoplasm

mitochondrion

glycine catabolic process

transaminase activity

transferase activity

Glycine, serine and threonine metabolism

One carbon pool by folate

Nitrogen metabolism

Metabolic pathways

222457_s_at -0.580 6.726 -2.470 2.580e-02 0.308 -3.532 LIMA1 LIM domain and actin binding 1 12 -48855829, -48855829 BC001247 12q13 Hs.525419 23

stress fiber

actin monomer binding

cytoplasm

focal adhesion

zinc ion binding

actin cytoskeleton

cell junction

negative regulation of actin filament depolymerization

ruffle organization

metal ion binding

actin filament binding

actin filament bundle formation

 
204028_s_at -0.359 8.424 -2.470 2.581e-02 0.308 -3.532 RABGAP1 RAB GTPase activating protein 1 9 124743108 NM_012197 9q33.2-q33.3 Hs.271341 6

GTPase activator activity

Rab GTPase activator activity

intracellular

cytoplasm

centrosome

cytosol

microtubule associated complex

cell cycle

tubulin binding

regulation of Rab GTPase activity

 
53987_at -0.239 5.906 -2.470 2.581e-02 0.308 -3.532 RANBP10 RAN binding protein 10 16 -66314505 AL041852 16q22.1 Hs.368569 8

microtubule cytoskeleton organization

Ran guanyl-nucleotide exchange factor activity

cytoplasm

cytoplasmic microtubule

Ran GTPase binding

beta-tubulin binding

 
212442_s_at -0.650 6.656 -2.470 2.582e-02 0.308 -3.533 LASS6 LAG1 homolog, ceramide synthase 6 2 169021080 BG289001 2q24.3 Hs.506829 Hs.718403 5

transcription factor activity

nucleus

endoplasmic reticulum

regulation of transcription, DNA-dependent

lipid biosynthetic process

membrane

integral to membrane

sphingolipid biosynthetic process

sequence-specific DNA binding

ceramide biosynthetic process

sphingosine N-acyltransferase activity

 
235508_at 0.288 5.918 2.469 2.587e-02 0.308 -3.534 PML promyelocytic leukemia 15 72074066, 72074066, 72074066 AW291023 15q22 Hs.526464 208

response to hypoxia

DNA binding

intracellular

insoluble fraction

nucleus

nucleoplasm

nucleolus

cytoplasm

protein complex assembly

induction of apoptosis

activation of caspase activity

DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest

cell cycle arrest

transforming growth factor beta receptor signaling pathway

common-partner SMAD protein phosphorylation

SMAD protein nuclear translocation

cell aging

zinc ion binding

negative regulation of cell proliferation

response to UV

response to gamma radiation

nuclear matrix

negative regulation of transcription

negative regulation of angiogenesis

PML body

myeloid cell differentiation

negative regulation of cell growth

transcription regulator activity

PML body organization

ubiquitin protein ligase binding

nuclear membrane

response to cytokine stimulus

DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis

protein homodimerization activity

interspecies interaction between organisms

regulation of MHC class I biosynthetic process

SMAD binding

metal ion binding

retinoic acid receptor signaling pathway

maintenance of protein location in nucleus

Ubiquitin mediated proteolysis

Pathways in cancer

Acute myeloid leukemia

233842_x_at -0.340 8.632 -2.469 2.587e-02 0.308 -3.534 C20orf43 chromosome 20 open reading frame 43 20 54477053 AK000586 20q13.31 Hs.517134 10

molecular_function

cellular_component

biological_process

 
214545_s_at -0.406 7.165 -2.469 2.588e-02 0.308 -3.535 PROSC proline synthetase co-transcribed homolog (bacterial) 8 37739258 NM_007198 8p11.2 Hs.304792 Hs.608177 8

intracellular

cytoplasm

 
228950_s_at -0.548 4.267 -2.468 2.591e-02 0.308 -3.536 GPR177 G protein-coupled receptor 177 1 -68363628, -68336738 AL534095 1p31.3 Hs.647659 8

signal transducer activity

membrane

integral to membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

 
203524_s_at 0.477 7.661 2.468 2.593e-02 0.309 -3.536 MPST mercaptopyruvate sulfurtransferase 22 35745647 NM_021126 22q13.1 Hs.248267 9

thiosulfate sulfurtransferase activity

cytoplasm

mitochondrion

sulfate transport

cyanate catabolic process

response to toxin

transferase activity

3-mercaptopyruvate sulfurtransferase activity

Cysteine and methionine metabolism

Metabolic pathways

201074_at -0.413 6.544 -2.467 2.594e-02 0.309 -3.537 SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 3 -47602381 AA593983 3p23-p21 Hs.476179 39

chromatin

DNA binding

chromatin binding

transcription coactivator activity

intracellular

nucleus

nucleoplasm

chromatin assembly or disassembly

chromatin remodeling

regulation of transcription from RNA polymerase II promoter

protein C-terminus binding

organ morphogenesis

SWI/SNF complex

regulation of transcription

positive regulation of transcription, DNA-dependent

protein N-terminus binding

 
211758_x_at -0.327 8.078 -2.467 2.595e-02 0.309 -3.537 TXNDC9 thioredoxin domain containing 9 2 -99301918 BC005968 2q11.2 Hs.536122 8

protein binding

cellular_component

biological_process

 
214620_x_at -0.510 7.799 -2.467 2.595e-02 0.309 -3.537 PAM peptidylglycine alpha-amidating monooxygenase 5 102229425 BF038548 5q14-q21 Hs.369430 34

monooxygenase activity

peptidylglycine monooxygenase activity

peptidylamidoglycolate lyase activity

copper ion binding

protein binding

extracellular region

protein modification process

peptide metabolic process

zinc ion binding

cellular process

membrane

integral to membrane

lyase activity

secretory granule

L-ascorbic acid binding

metal ion binding

oxidation reduction

 
1569879_a_at 0.244 6.234 2.467 2.595e-02 0.309 -3.537 MEGF11 multiple EGF-like-domains 11 15 -63974687 BC029999 15q22.31 Hs.712886 6

plasma membrane

integral to membrane

 
231948_s_at -0.367 7.718 -2.467 2.597e-02 0.309 -3.538 UBE2F ubiquitin-conjugating enzyme E2F (putative) 2 238540438 BG171548 2q37.3 Hs.471785 4

nucleotide binding

protein binding

ATP binding

ligase activity

NEDD8 ligase activity

modification-dependent protein catabolic process

protein neddylation

regulation of protein metabolic process

Ubiquitin mediated proteolysis

209113_s_at -0.353 5.518 -2.467 2.597e-02 0.309 -3.538 HMG20B high-mobility group 20B 19 3523942 AF288679 19p13.3 Hs.406534 18

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

cell cycle

chromatin modification

 
241729_at -0.289 3.747 -2.467 2.597e-02 0.309 -3.538 DOK6 docking protein 6 18 65219270 AW173080 18q22.2 Hs.278285 4

insulin receptor binding

 
202963_at -0.444 6.095 -2.467 2.599e-02 0.309 -3.538 RFX5 regulatory factor X, 5 (influences HLA class II expression) 1 -149579739 AW027312 1q21 Hs.632472 27

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

Antigen processing and presentation

Primary immunodeficiency

238577_s_at 0.337 2.850 2.466 2.601e-02 0.309 -3.539 TSHZ2 teashirt zinc finger homeobox 2 20 51022283 AA628481 20q13.2 Hs.271605 Hs.473117 Hs.649877 6

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

sequence-specific DNA binding

metal ion binding

 
203069_at 0.273 4.775 2.466 2.602e-02 0.309 -3.540 SV2A synaptic vesicle glycoprotein 2A 1 -148141499 NM_014849 1q21.2 Hs.516153 24

transporter activity

cytoplasm

endoplasmic reticulum

neurotransmitter transport

membrane

integral to membrane

cell junction

cytoplasmic vesicle

synapse

ECM-receptor interaction

231930_at -0.644 4.562 -2.466 2.603e-02 0.309 -3.540 ELMOD1 ELMO/CED-12 domain containing 1 11 106967026 AL359601 11q22.3 Hs.495779 5

cytoskeleton

phagocytosis

 
225344_at 0.420 6.390 2.466 2.604e-02 0.309 -3.540 NCOA7 nuclear receptor coactivator 7 6 126153693 AL035689 6q22.32 Hs.171426 18

protein binding

intracellular

nucleus

cell wall macromolecule catabolic process

regulation of transcription

 
204306_s_at -0.424 7.177 -2.465 2.604e-02 0.309 -3.540 CD151 CD151 molecule (Raph blood group) 11 822951 NM_004357 11p15.5 Hs.654379 55

protein binding

membrane fraction

plasma membrane

integral to plasma membrane

cell adhesion

 
1555595_at -0.292 3.001 -2.465 2.605e-02 0.309 -3.541 SCRN3 secernin 3 2 174968712 BC007344 2q31.1 Hs.470679 7    
226588_at -0.389 5.799 -2.465 2.606e-02 0.309 -3.541 CWC22 CWC22 spliceosome-associated protein homolog (S. cerevisiae) 2 -180517848 AB046824 2q31.3 Hs.311363 6

RNA binding

protein binding

nucleus

spliceosomal complex

mRNA processing

RNA splicing

RNA metabolic process

regulation of nuclear mRNA splicing, via spliceosome

 
1552280_at 0.311 3.795 2.465 2.607e-02 0.309 -3.541 TIMD4 T-cell immunoglobulin and mucin domain containing 4 5 -156278870 NM_138379 5q33.3 Hs.334907 11

membrane

integral to membrane

 
225200_at -0.830 7.822 -2.464 2.610e-02 0.309 -3.542 DPH3 DPH3, KTI11 homolog (S. cerevisiae) 3 -16273572 AU151106 3p25.1 Hs.388087 8

protein binding

nucleus

cytoplasm

zinc ion binding

peptidyl-diphthamide biosynthetic process from peptidyl-histidine

metal ion binding

negative regulation of protein secretion

positive regulation of binding

 
1558945_s_at 0.237 1.984 2.464 2.613e-02 0.309 -3.543 CACNA1A calcium channel, voltage-dependent, P/Q type, alpha 1A subunit 19 -13178256 BC042451 19p13.2-p13.1 Hs.501632 126

voltage-gated ion channel activity

voltage-gated calcium channel activity

voltage-gated calcium channel activity

calcium ion binding

protein binding

nucleus

cytoplasm

plasma membrane

plasma membrane

voltage-gated calcium channel complex

ion transport

calcium ion transport

elevation of cytosolic calcium ion concentration

cell death

integral to membrane

syntaxin binding

cell projection

MAPK signaling pathway

Calcium signaling pathway

Long-term depression

Taste transduction

Type II diabetes mellitus

1567628_at 0.295 4.600 2.463 2.614e-02 0.309 -3.544 CD74 CD74 molecule, major histocompatibility complex, class II invariant chain 5 -149761394, -149761392 M28590 5q32 Hs.436568 58

prostaglandin biosynthetic process

intracellular

protein complex assembly

intracellular protein transport

immune response

signal transduction

cell proliferation

membrane

integral to membrane

immunoglobulin mediated immune response

antigen processing and presentation of endogenous antigen

cytokine binding

MHC class II protein binding

identical protein binding

regulation of macrophage activation

negative regulation of apoptosis

T cell selection

Antigen processing and presentation

201392_s_at -0.495 8.226 -2.463 2.615e-02 0.309 -3.544 IGF2R insulin-like growth factor 2 receptor 6 160310120 BG031974 6q26 Hs.487062 101

glycoprotein binding

receptor activity

insulin-like growth factor receptor activity

transporter activity

insulin-like growth factor binding

mannose binding

membrane fraction

nucleus

nuclear envelope lumen

cytoplasm

lysosome

endosome

Golgi apparatus

integral to plasma membrane

transport

receptor-mediated endocytosis

signal transduction

membrane

trans-Golgi network transport vesicle

Lysosome

228608_at 0.487 3.211 2.463 2.615e-02 0.309 -3.544 NALCN sodium leak channel, non-selective 13 -100504130 N49852 13q32.3 Hs.525146 8

voltage-gated ion channel activity

sodium channel activity

ion transport

sodium ion transport

membrane

integral to membrane

sodium ion binding

 
227642_at -0.737 4.545 -2.463 2.615e-02 0.309 -3.544 TFCP2L1 transcription factor CP2-like 1 2 -121690635 AI928242 2q14 Hs.156471 8

negative regulation of transcription from RNA polymerase II promoter

cell morphogenesis

epithelial cell maturation

transcription factor activity

transcription corepressor activity

nucleus

cytoplasm

steroid biosynthetic process

cytoplasm organization

salivary gland development

female pregnancy

determination of adult lifespan

membrane

general transcriptional repressor activity

regulation of transcription

positive regulation of growth

 
214043_at -0.562 3.829 -2.463 2.617e-02 0.309 -3.545 PTPRD protein tyrosine phosphatase, receptor type, D 9 -8304245 BF062299 9p23-p24.3 Hs.446083 23

receptor activity

transmembrane receptor protein tyrosine phosphatase activity

protein binding

integral to plasma membrane

protein amino acid dephosphorylation

transmembrane receptor protein tyrosine phosphatase signaling pathway

membrane

hydrolase activity

 
228236_at 0.245 5.613 2.463 2.617e-02 0.309 -3.545 C20orf54 chromosome 20 open reading frame 54 20 -688723 AA903862 20p13 Hs.283865 6

membrane

integral to membrane

 
235257_at 0.302 5.607 2.463 2.617e-02 0.309 -3.545 ODF3B outer dense fiber of sperm tails 3B 22 -49315703 BF436372 22q13.33 Hs.531314 6    
238263_at 0.265 4.063 2.463 2.618e-02 0.309 -3.545 LOC285965 hypothetical protein LOC285965 7   AW590543 7q35 Hs.642649      
209531_at -0.356 7.331 -2.463 2.618e-02 0.309 -3.545 GSTZ1 glutathione transferase zeta 1 14 76856982, 76857458 BC001453 14q24.3 Hs.655292 31

glutathione transferase activity

glutathione peroxidase activity

protein binding

cytoplasm

mitochondrion

cytosol

L-phenylalanine catabolic process

tyrosine catabolic process

aromatic amino acid family metabolic process

maleylacetoacetate isomerase activity

maleylacetoacetate isomerase activity

transferase activity

isomerase activity

Tyrosine metabolism

Glutathione metabolism

Styrene degradation

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

Metabolic pathways

242838_at -0.487 5.515 -2.463 2.619e-02 0.309 -3.545 MAP6D1 MAP6 domain containing 1 3 -185016357 AA283642 3q27.1 Hs.478465 4

calmodulin binding

cytoplasm

Golgi apparatus

Golgi-associated vesicle

cis-Golgi network

cytoskeleton

negative regulation of microtubule depolymerization

microtubule binding

N-terminal peptidyl-L-cysteine N-palmitoylation

 
212260_at -0.397 6.622 -2.462 2.619e-02 0.309 -3.546 GIGYF2 GRB10 interacting GYF protein 2 2 233270258 AL045800 2q37.1 Hs.565319 23

protein binding

 
225340_s_at -0.392 7.527 -2.462 2.620e-02 0.309 -3.546 CAPRIN1 cell cycle associated protein 1 11 34029805, 34029805 BG107845 11p13 Hs.471818 10

protein binding

cytoplasm

cytosol

integral to plasma membrane

dendrite

cell projection

 
217997_at -0.416 3.562 -2.462 2.621e-02 0.309 -3.546 PHLDA1 pleckstrin homology-like domain, family A, member 1 12 -74705493 AI795908 12q15 Hs.602085 15

protein binding

nucleus

nucleolus

cytoplasm

apoptosis

membrane

cytoplasmic vesicle membrane

cytoplasmic vesicle

FasL biosynthetic process

 
219505_at 0.541 6.139 2.462 2.622e-02 0.309 -3.546 CECR1 cat eye syndrome chromosome region, candidate 1 22 -16040193, -16040191 NM_017424 22q11.2 Hs.170310 10

extracellular region

extracellular space

Golgi apparatus

multicellular organismal development

growth factor activity

purine ribonucleoside monophosphate biosynthetic process

hydrolase activity

deaminase activity

 
227137_at 0.345 3.105 2.462 2.622e-02 0.309 -3.547 C10orf46 chromosome 10 open reading frame 46 10 -120430483 N25937 10q26.11 Hs.719193 4

ubiquitin-dependent protein catabolic process

cullin-RING ubiquitin ligase complex

ubiquitin protein ligase binding

 
238171_at 0.301 4.024 2.462 2.624e-02 0.309 -3.547 SLC25A30 solute carrier family 25, member 30 13 -44865455 AI128486 13q14.13 Hs.591230 3

binding

mitochondrion

mitochondrial inner membrane

transport

mitochondrial transport

membrane

integral to membrane

 
225474_at 0.617 5.455 2.462 2.624e-02 0.309 -3.547 MAGI1 membrane associated guanylate kinase, WW and PDZ domain containing 1 3 -65319983, -65314945 AI141556 3p14.1 Hs.651939 24

nucleotide binding

ATP binding

plasma membrane

cell-cell junction

tight junction

protein complex assembly

cell adhesion

cell surface receptor linked signal transduction

protein C-terminus binding

Tight junction

227282_at 0.356 4.869 2.460 2.633e-02 0.310 -3.550 PCDH19 protocadherin 19 X -99433297 AB037734 Xq13.3 Hs.4993 12

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

 
202683_s_at -0.414 6.322 -2.460 2.633e-02 0.310 -3.550 RNMT RNA (guanine-7-) methyltransferase 18 13716703 NM_003799 18p11.22-p11.23 Hs.592347 13

RNA binding

mRNA (guanine-N7-)-methyltransferase activity

mRNA (guanine-N7-)-methyltransferase activity

nucleus

nucleoplasm

mRNA capping

methyltransferase activity

transferase activity

 
202207_at 1.091 4.276 2.460 2.633e-02 0.310 -3.550 ARL4C ADP-ribosylation factor-like 4C 2 -235066424 BG435404 2q37.1 Hs.111554 Hs.719190 7

nucleotide binding

GTPase activity

GTP binding

intracellular

nucleus

small GTPase mediated signal transduction

 
218773_s_at 0.269 10.273 2.460 2.633e-02 0.310 -3.550 MSRB2 methionine sulfoxide reductase B2 10 23424432 NM_012228 10p12 Hs.461420 14

protein-methionine-R-oxide reductase activity

transcription factor activity

mitochondrion

peptide-methionine-(S)-S-oxide reductase activity

zinc ion binding

oxidoreductase activity

protein repair

metal ion binding

oxidation reduction

 
237373_at 0.218 3.485 2.460 2.634e-02 0.310 -3.550 RAB20 RAB20, member RAS oncogene family 13 -109973413 BE464359 13q34 Hs.719403 7

nucleotide binding

GTP binding

Golgi apparatus

small GTPase mediated signal transduction

protein transport

 
230938_x_at 0.328 7.105 2.459 2.635e-02 0.310 -3.551 ATF5 activating transcription factor 5 19 55123785 H48515 19q13.3 Hs.9754 25

transcription factor activity

RNA polymerase II transcription factor activity

transcription corepressor activity

nucleus

transcription factor complex

cytoplasm

regulation of transcription from RNA polymerase II promoter

anti-apoptosis

sequence-specific DNA binding

protein dimerization activity

 
236171_at 0.263 4.870 2.459 2.636e-02 0.310 -3.551 ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 16 82959633 BE219325 16q24.1 Hs.6168 6

nucleotide binding

magnesium ion binding

calcium-transporting ATPase activity

calcium ion binding

ATP binding

ATP biosynthetic process

cation transport

calcium ion transport

metabolic process

membrane

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

 
220449_at 0.234 5.908 2.459 2.637e-02 0.310 -3.551 MGC5566 hypothetical protein MGC5566 20   NM_024049 20q13.12 Hs.255479 1    
226562_at -0.379 6.800 -2.459 2.637e-02 0.310 -3.551 ZSCAN29 zinc finger and SCAN domain containing 29 15 -41437661 BE622486 15q15.3 Hs.418287 5

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
AFFX-HUMISGF3A/M97935_MA_at 0.243 5.781 2.459 2.640e-02 0.310 -3.552 STAT1 signal transducer and activator of transcription 1, 91kDa 2 -191548507, -191542006 AFFX-HUMISGF3A/M97935_MA 2q32.2 Hs.642990 Hs.715518 323

transcription factor activity

signal transducer activity

hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity

calcium ion binding

protein binding

nucleus

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

activation of caspase activity

signal transduction

I-kappaB kinase/NF-kappaB cascade

tyrosine phosphorylation of STAT protein

response to virus

interspecies interaction between organisms

Chemokine signaling pathway

Toll-like receptor signaling pathway

Jak-STAT signaling pathway

Pathways in cancer

Pancreatic cancer

224513_s_at -0.315 7.096 -2.458 2.640e-02 0.310 -3.553 UBQLN4 ubiquilin 4 1 -154271715 BC006410 1q21 Hs.283739 9

nucleus

cytoplasm

endoplasmic reticulum

endoplasmic reticulum membrane

cytosol

biological_process

identical protein binding

 
205438_at -0.250 4.659 -2.458 2.641e-02 0.310 -3.553 PTPN21 protein tyrosine phosphatase, non-receptor type 21 14 -88001874 NM_007039 14q31.3 Hs.437040 10

protein tyrosine phosphatase activity

binding

cytoplasm

cytoskeleton

protein amino acid dephosphorylation

hydrolase activity

 
200790_at -0.637 9.208 -2.458 2.642e-02 0.310 -3.553 ODC1 ornithine decarboxylase 1 2 -10497958 NM_002539 2p25 Hs.467701 47

kidney development

ornithine decarboxylase activity

protein binding

cellular_component

cytosol

polyamine biosynthetic process

positive regulation of cell proliferation

lyase activity

Arginine and proline metabolism

Glutathione metabolism

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Metabolic pathways

209546_s_at 0.310 6.253 2.458 2.644e-02 0.310 -3.554 APOL1 apolipoprotein L, 1 22 34979062 AF323540 22q13.1 Hs.114309 27

chloride channel activity

protein binding

extracellular region

extracellular space

lipid metabolic process

chloride transport

lipid transport

steroid metabolic process

cholesterol metabolic process

lipid binding

cytolysis

intrinsic to membrane

killing of cells of another organism

very-low-density lipoprotein particle

high-density lipoprotein particle

lipoprotein metabolic process

innate immune response

 
211197_s_at 0.230 5.329 2.458 2.645e-02 0.310 -3.554 ICOSLG inducible T-cell co-stimulator ligand 21 -44471149 AL355690 21q22.3 Hs.14155 29

receptor binding

defense response

immune response

hyperosmotic response

signal transduction

membrane

integral to membrane

positive regulation of activated T cell proliferation

T cell activation

B cell activation

Cell adhesion molecules (CAMs)

212871_at -0.532 5.925 -2.458 2.645e-02 0.310 -3.554 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 12 110764661 NM_003668 12q24.12-q24.13 Hs.413901 16

nucleotide binding

protein serine/threonine kinase activity

MAP kinase kinase activity

protein binding

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

signal transduction

transferase activity

MAPK signaling pathway

201722_s_at -0.557 8.042 -2.457 2.647e-02 0.310 -3.555 GALNT1 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) 18 31488530 AV692127 18q12.1 Hs.514806 26

polypeptide N-acetylgalactosaminyltransferase activity

calcium ion binding

sugar binding

extracellular region

Golgi apparatus

membrane

integral to membrane

transferase activity, transferring glycosyl groups

protein amino acid O-linked glycosylation via serine

protein amino acid O-linked glycosylation via threonine

manganese ion binding

perinuclear region of cytoplasm

O-Glycan biosynthesis

Metabolic pathways

206010_at 0.391 4.744 2.457 2.647e-02 0.310 -3.555 HABP2 hyaluronan binding protein 2 10 115302767 NM_004132 10q25.3 Hs.422542 30

serine-type endopeptidase activity

glycosaminoglycan binding

extracellular region

extracellular space

proteolysis

cell adhesion

peptidase activity

 
217743_s_at -0.457 6.162 -2.457 2.647e-02 0.310 -3.555 TMEM30A transmembrane protein 30A 6 -76019357 NM_018247 6q14.1 Hs.108530 7

membrane

integral to membrane

 
227235_at 0.328 6.520 2.457 2.648e-02 0.310 -3.555 GUCY1A3 guanylate cyclase 1, soluble, alpha 3 4 156807311, 156807311, 156807311, 156807598, 156807598, 156808264 AI758408 4q31.1-q31.2 4q31.3-q33 Hs.24258 14

nucleotide binding

guanylate cyclase activity

receptor activity

GTP binding

cytoplasm

nitric oxide mediated signal transduction

guanylate cyclase complex, soluble

regulation of blood pressure

positive regulation of cGMP biosynthetic process

response to defense-related host nitric oxide production

relaxation of vascular smooth muscle

Purine metabolism

Vascular smooth muscle contraction

Gap junction

Long-term depression

32091_at -0.288 6.740 -2.457 2.648e-02 0.310 -3.555 SLC25A44 solute carrier family 25, member 44 1 154430353 AB007915 1q22 Hs.532375 6

transporter activity

binding

mitochondrion

mitochondrial inner membrane

transport

membrane

integral to membrane

 
203097_s_at -0.339 8.111 -2.457 2.649e-02 0.310 -3.555 RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 4 160408447 NM_014247 4q32.1 Hs.113912 14

MAPKKK cascade

signal transducer activity

guanyl-nucleotide exchange factor activity

calcium ion binding

protein binding

intracellular

plasma membrane

integral to plasma membrane

Rap guanyl-nucleotide exchange factor activity

cAMP-mediated signaling

diacylglycerol binding

Rap GTPase activator activity

regulation of small GTPase mediated signal transduction

MAPK signaling pathway

215294_s_at -0.488 4.844 -2.457 2.649e-02 0.310 -3.556 SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 X -128408158 AK026426 Xq25 Hs.152292 15

nucleotide binding

DNA binding

helicase activity

protein binding

ATP binding

nucleus

brain development

DNA-dependent ATPase activity

chromatin remodeling complex

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

neuron differentiation

transcription regulator activity

nucleosome binding

ATP-dependent chromatin remodeling

positive regulation of gene-specific transcription

regulation of transcription

 
235226_at 0.359 3.022 2.457 2.650e-02 0.310 -3.556 CDC2L6 cell division cycle 2-like 6 (CDK8-like) 6 -111037873 AA994004 6q21 Hs.719138 10

nucleotide binding

cyclin-dependent protein kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

transferase activity

 
226026_at -0.556 7.505 -2.456 2.651e-02 0.310 -3.556 DIRC2 disrupted in renal carcinoma 2 3 123996590 AI147467 3q21.1 Hs.477346 7

transport

membrane

integral to membrane

 
204620_s_at -0.587 5.836 -2.456 2.651e-02 0.310 -3.556 VCAN versican 5 82803248 NM_004385 5q14.3 Hs.643801 Hs.715773 74

binding

calcium ion binding

sugar binding

hyaluronic acid binding

extracellular region

proteinaceous extracellular matrix

cell adhesion

multicellular organismal development

cell recognition

Cell adhesion molecules (CAMs)

221927_s_at 0.344 7.441 2.456 2.653e-02 0.310 -3.557 ABHD11 abhydrolase domain containing 11 7 -72789980, -72789935, -72788362, -72788362 AI923458 7q11.23 Hs.647045 9

molecular_function

cellular_component

biological_process

hydrolase activity

 
213574_s_at -0.431 8.607 -2.456 2.655e-02 0.311 -3.558 KPNB1 karyopherin (importin) beta 1 17 43082273 AA861608 17q21.32 Hs.532793 Hs.706168 113

protein import into nucleus, docking

protein import into nucleus, translocation

nucleus

nuclear pore

nucleoplasm

cytoplasm

cytosol

NLS-bearing substrate import into nucleus

ribosomal protein import into nucleus

nuclear localization sequence binding

zinc ion binding

protein transporter activity

protein domain specific binding

interspecies interaction between organisms

 
223629_at -0.406 4.087 -2.456 2.655e-02 0.311 -3.558 PCDHB5 protocadherin beta 5 5 140494983 BC001186 5q31 Hs.119693 11

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

synaptic transmission

synaptogenesis

integral to membrane

calcium-dependent cell-cell adhesion

 
201274_at -0.254 8.803 -2.455 2.657e-02 0.311 -3.558 PSMA5 proteasome (prosome, macropain) subunit, alpha type, 5 1 -109745994 NM_002790 1p13 Hs.712557 45

threonine-type endopeptidase activity

protein binding

nucleus

cytoplasm

cytosol

proteasome core complex

ubiquitin-dependent protein catabolic process

peptidase activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

proteolysis involved in cellular protein catabolic process

Proteasome

202295_s_at 0.439 7.350 2.455 2.657e-02 0.311 -3.558 CTSH cathepsin H 15 -77001146 NM_004390 15q24-q25 Hs.148641 34

cysteine-type endopeptidase activity

protein binding

lysosome

endoplasmic reticulum

proteolysis

peptidase activity

Lysosome

209055_s_at -0.556 6.170 -2.455 2.658e-02 0.311 -3.559 CDC5L CDC5 cell division cycle 5-like (S. pombe) 6 44463279 AW268817 6p21 Hs.485471 35

DNA binding

RNA binding

protein binding

nucleus

spliceosomal complex

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

mRNA processing

cell cycle

RNA splicing

nuclear speck

 
242396_at 0.351 3.868 2.454 2.661e-02 0.311 -3.560 LOC100132798 similar to hCG1774772 15   AA195408 15q26.2        
222661_at -0.359 7.006 -2.454 2.662e-02 0.311 -3.560 AGGF1 angiogenic factor with G patch and FHA domains 1 5 76361987 AA528017 5q13.3 Hs.634849 12

vasculogenesis

positive regulation of endothelial cell proliferation

nucleic acid binding

protein binding

extracellular region

intracellular

cytoplasm

RNA processing

cell adhesion

multicellular organismal development

eukaryotic cell surface binding

positive regulation of angiogenesis

perinuclear region of cytoplasm

 
224664_at -0.278 10.834 -2.453 2.666e-02 0.311 -3.561 C10orf104 chromosome 10 open reading frame 104 10 73645811 BE962336 10q22.1 Hs.426296 5    
214670_at -0.496 5.726 -2.453 2.668e-02 0.311 -3.562 ZKSCAN1 zinc finger with KRAB and SCAN domains 1 7 99451154 AA653300 7q21.3-q22.1 Hs.615360 11

transcription factor activity

intracellular

nucleus

cytoplasm

mitochondrion

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
210029_at 0.554 6.979 2.453 2.669e-02 0.311 -3.562 IDO1 indoleamine 2,3-dioxygenase 1 8 39890484 M34455 8p12-p11 Hs.840 105

positive regulation of T cell tolerance induction

positive regulation of chronic inflammatory response

positive regulation of T-helper 2 type immune response

tryptophan 2,3-dioxygenase activity

tryptophan 2,3-dioxygenase activity

cytoplasm

cytosol

female pregnancy

electron carrier activity

oxidoreductase activity

tryptophan catabolic process to kynurenine

NAD metabolic process

heme binding

indoleamine 2,3-dioxygenase activity

metal ion binding

oxidation reduction

Tryptophan metabolism

Metabolic pathways

1554555_a_at -0.458 6.387 -2.453 2.669e-02 0.311 -3.562 SETD6 SET domain containing 6 16 57106883 BC022451 16q21 Hs.592060 5    
226856_at -0.868 11.844 -2.453 2.670e-02 0.311 -3.562 MUSTN1 musculoskeletal, embryonic nuclear protein 1 3 -52842176 BF793701 3p21.1 Hs.556077 1

nucleus

 
222327_x_at 0.455 5.425 2.453 2.670e-02 0.311 -3.562 OR7E156P olfactory receptor, family 7, subfamily E, member 156 pseudogene 13 63209568 AA459867 13q21.31 Hs.363054 Hs.694575 2    
234464_s_at -0.335 4.366 -2.453 2.671e-02 0.311 -3.563 EME1 essential meiotic endonuclease 1 homolog 1 (S. pombe) 17 45805588 AK021607 17q21.33 Hs.514330 15

magnesium ion binding

DNA binding

endonuclease activity

protein binding

nucleus

nucleolus

DNA repair

DNA recombination

response to DNA damage stimulus

hydrolase activity

Homologous recombination

228788_at -0.662 4.036 -2.453 2.671e-02 0.311 -3.563 YPEL1 yippee-like 1 (Drosophila) 22 -20381825 AA425358 22q11.2 Hs.517436 7

nucleus

 
203373_at 0.621 4.920 2.452 2.673e-02 0.311 -3.563 SOCS2 suppressor of cytokine signaling 2 12 92487728 NM_003877 12q Hs.485572 40

regulation of cell growth

SH3/SH2 adaptor activity

growth hormone receptor binding

prolactin receptor binding

insulin-like growth factor receptor binding

protein binding

cytoplasm

anti-apoptosis

intracellular signaling cascade

JAK-STAT cascade

JAK pathway signal transduction adaptor activity

negative regulation of signal transduction

modification-dependent protein catabolic process

response to estradiol stimulus

growth hormone receptor signaling pathway

Jak-STAT signaling pathway

Insulin signaling pathway

Type II diabetes mellitus

1570383_at 0.249 3.704 2.452 2.674e-02 0.311 -3.564 BMP1 bone morphogenetic protein 1 8 22078619, 22078619 AF289591 8p21.3 Hs.1274 38

cartilage condensation

ossification

metalloendopeptidase activity

cytokine activity

calcium ion binding

extracellular space

proteolysis

multicellular organismal development

growth factor activity

peptidase activity

zinc ion binding

cell differentiation

 
219239_s_at -0.487 5.272 -2.452 2.674e-02 0.311 -3.564 ZNF654 zinc finger protein 654 3 88270951 NM_018293 3p11.1 Hs.591650 Hs.661116 1

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
1553603_s_at -0.501 4.235 -2.452 2.676e-02 0.311 -3.564 ATL2 atlastin GTPase 2 2 -38375534 NM_022374 2p22.2-p22.1 Hs.594950 8

nucleotide binding

GTPase activity

GTP binding

membrane

integral to membrane

 
205838_at 0.291 3.646 2.451 2.677e-02 0.312 -3.565 GYPA glycophorin A (MNS blood group) 4 -145249905 NM_002099 4q28.2-q31.1 Hs.434973 60

membrane fraction

plasma membrane

integral to membrane

identical protein binding

Hematopoietic cell lineage

225184_at -0.329 5.435 -2.451 2.677e-02 0.312 -3.565 ARID1B AT rich interactive domain 1B (SWI1-like) 6 157140777 AK000921 6q25.1 Hs.291587 Hs.714899 22

DNA binding

DNA binding

transcription coactivator activity

protein binding

intracellular

nucleus

nucleolus

cytoplasm

SWI/SNF complex

chromatin modification

regulation of transcription

chromatin-mediated maintenance of transcription

 
209846_s_at 0.590 6.032 2.451 2.680e-02 0.312 -3.566 BTN3A2 butyrophilin, subfamily 3, member A2 6 26473376 BC002832 6p22.1 Hs.376046 9

biological_process

membrane

integral to membrane

 
219204_s_at -0.683 4.806 -2.451 2.681e-02 0.312 -3.566 SRR serine racemase 17 2153997 NM_021947 17p13 Hs.461954 22

calcium ion binding

protein binding

ATP binding

cellular amino acid metabolic process

L-serine metabolic process

metabolic process

glycine binding

isomerase activity

racemase and epimerase activity, acting on amino acids and derivatives

threonine racemase activity

pyridoxal phosphate binding

serine racemase activity

protein homodimerization activity

protein homotetramerization

D-serine biosynthetic process

Glycine, serine and threonine metabolism

221884_at 0.405 5.524 2.450 2.684e-02 0.312 -3.567 MECOM MDS1 and EVI1 complex locus 3 -170283980, -170283980, -170283980, -170283980 BE466525 3q24-q28 Hs.659873 Hs.719216 46

molecular_function

DNA binding

transcription factor activity

protein binding

intracellular

nucleus

multicellular organismal development

biological_process

zinc ion binding

metal ion binding

MAPK signaling pathway

Pathways in cancer

Chronic myeloid leukemia

231879_at -0.444 4.156 -2.450 2.684e-02 0.312 -3.567 COL12A1 collagen, type XII, alpha 1 6 -75850761 AL096771 6q12-q13 Hs.101302 19

skeletal system development

structural molecule activity

protein binding

extracellular region

proteinaceous extracellular matrix

collagen type XII

cell adhesion

extracellular matrix structural constituent conferring tensile strength

collagen fibril organization

 
235367_at -0.658 8.917 -2.450 2.684e-02 0.312 -3.567 MYPN myopalladin 10 69539255 BF109970 10q21.3 Hs.55205 12

actin binding

nucleus

cytoplasm

sarcomere

 
210175_at -0.422 6.860 -2.450 2.684e-02 0.312 -3.567 C2orf3 chromosome 2 open reading frame 3 2 -75742801 BC000853 2p11.2-p11.1 Hs.303808 Hs.662279 13

transcription factor activity

protein binding

nucleus

regulation of transcription

 
1553061_at 0.362 4.621 2.450 2.685e-02 0.312 -3.568 OR6W1P olfactory receptor, family 6, subfamily W, member 1 pseudogene 7 -142469502 NM_033519 7q34 Hs.339818 2    
203618_at 0.259 5.620 2.450 2.686e-02 0.312 -3.568 FAIM2 Fas apoptotic inhibitory molecule 2 12 -48546946 AB023167 12q13 Hs.567424 9

protein binding

plasma membrane

apoptosis

anti-apoptosis

integral to membrane

cell junction

synapse

postsynaptic membrane

 
232636_at -1.743 4.987 -2.450 2.687e-02 0.312 -3.568 SLITRK4 SLIT and NTRK-like family, member 4 X -142543607 AL080239 Xq27.3 Hs.272284 4

protein binding

axonogenesis

membrane

integral to membrane

 
244556_at 0.326 4.273 2.449 2.688e-02 0.312 -3.569 LCP2 lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa) 5 -169607665 AI824014 5q33.1-qter Hs.304475 72

protein binding

cytoplasm

cytosol

immune response

transmembrane receptor protein tyrosine kinase signaling pathway

mast cell activation

cytokine secretion

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

Fc epsilon RI signaling pathway

229528_at -0.222 6.630 -2.448 2.693e-02 0.312 -3.570 LOC283378 hypothetical protein LOC283378 12   AI670935 12q24.31 Hs.594149 1    
1556474_a_at -0.291 2.496 -2.448 2.694e-02 0.312 -3.570 FLJ38379 hypothetical FLJ38379 2   AK095698 2q37.3 Hs.653239 1    
231759_at -0.538 6.621 -2.448 2.694e-02 0.312 -3.570 TAL2 T-cell acute lymphocytic leukemia 2 9 107464558 NM_005421 9q32 Hs.247978 9

DNA binding

protein binding

nucleus

behavior

post-embryonic development

thalamus development

transcription regulator activity

midbrain development

multicellular organism growth

regulation of transcription

 
211276_at 0.288 3.057 2.448 2.695e-02 0.312 -3.571 TCEAL2 transcription elongation factor A (SII)-like 2 X 101267315 AF063606 Xq22.1-q22.3 Hs.401835 6

nucleus

regulation of transcription

 
221252_s_at 0.252 3.807 2.448 2.697e-02 0.312 -3.571 GSG1 germ cell associated 1 12 -13128308, -13128308 NM_031289 12p13.1 Hs.240053 7

endoplasmic reticulum

membrane

integral to membrane

 
227728_at -0.426 9.606 -2.447 2.699e-02 0.313 -3.572 PPM1A protein phosphatase 1A (formerly 2C), magnesium-dependent, alpha isoform 14 59782222, 59785718, 59785718 AA886888 14q23.1 Hs.130036 28

magnesium ion binding

protein serine/threonine phosphatase activity

signal transducer activity

cellular_component

membrane fraction

voltage-gated calcium channel complex

protein amino acid dephosphorylation

protein C-terminus binding

protein serine/threonine phosphatase complex

hydrolase activity

manganese ion binding

positive regulation of Wnt receptor signaling pathway

neuron projection

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of transcription, DNA-dependent

MAPK signaling pathway

201223_s_at -0.335 9.235 -2.447 2.700e-02 0.313 -3.572 RAD23B RAD23 homolog B (S. cerevisiae) 9 109085364 NM_002874 9q31.2 Hs.521640 54

nucleotide-excision repair, DNA damage removal

damaged DNA binding

single-stranded DNA binding

protein binding

nucleus

nucleoplasm

cytoplasm

cytosol

response to DNA damage stimulus

modification-dependent protein catabolic process

proteasomal ubiquitin-dependent protein catabolic process

protein complex

Nucleotide excision repair

204369_at -0.587 5.570 -2.447 2.700e-02 0.313 -3.572 PIK3CA phosphoinositide-3-kinase, catalytic, alpha polypeptide 3 180349004 NM_006218 3q26.3 Hs.553498 Hs.85701 259

nucleotide binding

inositol or phosphatidylinositol kinase activity

ATP binding

cytosol

phosphoinositide 3-kinase complex

glucose metabolic process

protein amino acid phosphorylation

anti-apoptosis

signal transduction

1-phosphatidylinositol-3-kinase activity

transferase activity

phosphotransferase activity, alcohol group as acceptor

lamellipodium

regulation of multicellular organism growth

protein kinase B signaling cascade

insulin receptor substrate binding

phosphoinositide phosphorylation

phosphatidylinositol-4,5-bisphosphate 3-kinase activity

phosphatidylinositol-4,5-bisphosphate 3-kinase activity

phosphoinositide-mediated signaling

Inositol phosphate metabolism

ErbB signaling pathway

Chemokine signaling pathway

Phosphatidylinositol signaling system

mTOR signaling pathway

Apoptosis

VEGF signaling pathway

Focal adhesion

Toll-like receptor signaling pathway

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Insulin signaling pathway

Type II diabetes mellitus

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Chronic myeloid leukemia

Acute myeloid leukemia

Small cell lung cancer

Non-small cell lung cancer

205570_at 0.361 4.189 2.447 2.701e-02 0.313 -3.573 PIP4K2A phosphatidylinositol-5-phosphate 4-kinase, type II, alpha 10 -22863771 NM_005028 10p12.2 Hs.57079 24

nucleotide binding

ATP binding

cellular_component

kinase activity

1-phosphatidylinositol-4-phosphate 5-kinase activity

1-phosphatidylinositol-5-phosphate 4-kinase activity

phosphorylation

transferase activity

phosphatidylinositol metabolic process

Inositol phosphate metabolism

Phosphatidylinositol signaling system

Regulation of actin cytoskeleton

212882_at -0.316 5.474 -2.447 2.703e-02 0.313 -3.573 KLHL18 kelch-like 18 (Drosophila) 3 47299333 AB018338 3p21.31 Hs.517946 8

protein binding

 
202220_at -0.380 7.512 -2.446 2.704e-02 0.313 -3.574 KIAA0907 KIAA0907 1 -154149459 NM_014949 1q22 Hs.719258 6    
215328_at 0.289 4.658 2.446 2.704e-02 0.313 -3.574 EFR3B EFR3 homolog B (S. cerevisiae) 2 25118476 AB023170 2p23.3 Hs.4892 6

binding

 
223266_at -0.490 8.997 -2.446 2.706e-02 0.313 -3.575 STRADB STE20-related kinase adaptor beta 2 202024636 AB038950 2q33.1 Hs.652338 12

nucleotide binding

protein kinase activity

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

protein export from nucleus

cell cycle

activation of protein kinase activity

 
236166_at -0.474 7.559 -2.446 2.707e-02 0.313 -3.575 LOC285147 hypothetical protein LOC285147 2   AW195071 2p25.2 Hs.467627 1    
207261_at 0.272 2.293 2.446 2.707e-02 0.313 -3.575 CNGA3 cyclic nucleotide gated channel alpha 3 2 98329049 NM_001298 2q11.2 Hs.234785 26

nucleotide binding

ion transport

signal transduction

visual perception

ligand-gated ion channel activity

membrane

integral to membrane

cGMP binding

response to stimulus

Olfactory transduction

207573_x_at 0.294 11.545 2.446 2.708e-02 0.313 -3.575 ATP5L ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G 11 117777313 NM_006476 11q23.3 Hs.486360 15

mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)

protein binding

mitochondrion

ion transport

hydrogen ion transmembrane transporter activity

ATP synthesis coupled proton transport

proton transport

membrane

ATPase activity

Oxidative phosphorylation

Metabolic pathways

232510_s_at -0.334 6.473 -2.446 2.708e-02 0.313 -3.575 DPP3 dipeptidyl-peptidase 3 11 66004455 AW250952 11q12-q13.1 Hs.502914 29

aminopeptidase activity

cytoplasm

proteolysis

peptidase activity

metallopeptidase activity

dipeptidyl-peptidase activity

zinc ion binding

metal ion binding

 
206105_at 0.325 4.488 2.446 2.708e-02 0.313 -3.575 AFF2 AF4/FMR2 family, member 2 X 147389830 NM_002025 Xq28 Hs.496911 21

protein binding

brain development

 
1569699_at 0.428 4.139 2.445 2.710e-02 0.313 -3.576 AK7 adenylate kinase 7 14 95928200 BC023986 14q32.2 Hs.667462 4

nucleotide binding

adenylate kinase activity

ATP binding

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

metabolic process

transferase activity

nucleobase, nucleoside, nucleotide kinase activity

Purine metabolism

Metabolic pathways

226529_at -0.485 9.306 -2.445 2.710e-02 0.313 -3.576 TMEM106B transmembrane protein 106B 7 12217372 BF513060 7p21.3 Hs.396358 10

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
225208_s_at -0.293 7.809 -2.445 2.710e-02 0.313 -3.576 FAM103A1 family with sequence similarity 103, member A1 15 81445998 AW575350 15q25.2 Hs.80624 3    
201543_s_at 0.319 7.255 2.445 2.711e-02 0.313 -3.576 SAR1A SAR1 homolog A (S. cerevisiae) 10 -71579973 NM_020150 10q22.1 Hs.499960 Hs.594910 13

nucleotide binding

GTPase activity

GTP binding

intracellular

cytoplasm

Golgi apparatus

intracellular protein transport

ER to Golgi vesicle-mediated transport

vesicle-mediated transport

sarcoplasmic reticulum

 
208405_s_at -0.403 8.931 -2.445 2.712e-02 0.313 -3.576 CD164 CD164 molecule, sialomucin 6 -109794411 NM_006016 6q21 Hs.520313 Hs.644693 17

extracellular region

plasma membrane

integral to plasma membrane

immune response

cell adhesion

heterophilic cell adhesion

signal transduction

multicellular organismal development

negative regulation of cell proliferation

Lysosome

242070_at 0.269 3.143 2.445 2.714e-02 0.313 -3.577 LOC728485 hypothetical protein LOC728485 19   AI014470 19q13.12 Hs.157101 2    
209698_at 0.345 6.656 2.444 2.714e-02 0.313 -3.577 CCHCR1 coiled-coil alpha-helical rod protein 1 6 -31218194, -31218194, -2561482, -2561482, -2359996, -2359996 AF216493 6p21.3 Hs.485075 23

protein binding

nucleus

cytoplasm

protein export from nucleus

multicellular organismal development

cell differentiation

 
219015_s_at -0.429 4.438 -2.444 2.716e-02 0.313 -3.578 ALG13 asparagine-linked glycosylation 13 homolog (S. cerevisiae) X 110811068 NM_018466 Xq23 Hs.443061 14

N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity

endoplasmic reticulum

carbohydrate metabolic process

transferase activity, transferring hexosyl groups

carbohydrate binding

lipid glycosylation

N-Glycan biosynthesis

Metabolic pathways

213773_x_at -0.359 7.746 -2.444 2.716e-02 0.313 -3.578 NSUN5 NOL1/NOP2/Sun domain family, member 5 7 -72355161 AW248552 7q11.23 Hs.647060 9

methyltransferase activity

transferase activity

 
202695_s_at -0.530 3.819 -2.444 2.718e-02 0.313 -3.578 STK17A serine/threonine kinase 17a 7 43589216 NM_004760 7p12-p14 Hs.709489 6

nucleotide binding

protein serine/threonine kinase activity

ATP binding

nucleus

protein amino acid phosphorylation

apoptosis

induction of apoptosis

protein kinase cascade

transferase activity

 
201792_at 0.244 5.774 2.444 2.719e-02 0.313 -3.578 AEBP1 AE binding protein 1 7 44110484 NM_001129 7p13 Hs.439463 9

skeletal system development

transcription factor activity

metallocarboxypeptidase activity

extracellular region

nucleus

cytoplasm

proteolysis

cell adhesion

muscle organ development

zinc ion binding

regulation of transcription

 
218152_at -0.319 7.478 -2.443 2.721e-02 0.313 -3.579 HMG20A high-mobility group 20A 15 75500297 NM_018200 15q24 Hs.69594 9

transcription factor activity

protein binding

nucleus

nucleolus

regulation of transcription, DNA-dependent

chromatin modification

 
211352_s_at -0.642 5.796 -2.443 2.722e-02 0.313 -3.579 NCOA3 nuclear receptor coactivator 3 20 45564063 U80737 20q12 Hs.592142 140

transcription coactivator activity

histone acetyltransferase activity

signal transducer activity

nucleus

cytoplasm

signal transduction

acyltransferase activity

transferase activity

androgen receptor signaling pathway

transcription regulator activity

positive regulation of transcription, DNA-dependent

thyroid hormone receptor binding

protein N-terminus binding

androgen receptor binding

 
208847_s_at -0.260 8.846 -2.443 2.723e-02 0.313 -3.580 ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide 4 -100211152 M29872 4q21-q25 Hs.78989 33

retinoid metabolic process

respiratory system process

alcohol dehydrogenase (NAD) activity

binding

fatty acid binding

cytoplasm

mitochondrion

ethanol oxidation

zinc ion binding

electron carrier activity

oxidoreductase activity

peptidyl-cysteine S-nitrosylation

formaldehyde dehydrogenase activity

response to lipopolysaccharide

protein homodimerization activity

positive regulation of blood pressure

formaldehyde catabolic process

metal ion binding

response to nitrosative stress

response to redox state

S-(hydroxymethyl)glutathione dehydrogenase activity

oxidation reduction

Glycolysis / Gluconeogenesis

Fatty acid metabolism

Tyrosine metabolism

1- and 2-Methylnaphthalene degradation

3-Chloroacrylic acid degradation

Methane metabolism

Retinol metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

Metabolic pathways

205240_at -0.433 5.059 -2.443 2.723e-02 0.313 -3.580 GPSM2 G-protein signaling modulator 2 (AGS3-like, C. elegans) 1 109221125 NM_013296 1p13.3 Hs.584901 11

GTPase activator activity

nucleus

nucleolus

cytoplasm

Golgi apparatus

cell cortex

signal transduction

G-protein coupled receptor protein signaling pathway

identical protein binding

 
51226_at 0.279 3.438 2.443 2.723e-02 0.313 -3.580 RBM12B RNA binding motif protein 12B 8 -94812903 N53536 8q22.1 Hs.192788 3

nucleotide binding

RNA binding

 
219594_at -1.028 6.774 -2.443 2.724e-02 0.313 -3.580 NINJ2 ninjurin 2 12 -543722 NM_016533 12p13 Hs.656450 5

protein binding

integral to plasma membrane

cell adhesion

neuron adhesion

nervous system development

membrane

tissue regeneration

 
1570128_at 0.291 3.540 2.443 2.724e-02 0.313 -3.580 DDX19A DEAD (Asp-Glu-Ala-As) box polypeptide 19A 16 68938324 BC025771 16q22.1 Hs.656037 5

nucleotide binding

RNA binding

helicase activity

ATP binding

nucleus

nuclear pore

cytoplasm

ATP-dependent helicase activity

protein transport

membrane

hydrolase activity

mRNA transport

intracellular protein transmembrane transport

 
1555902_at 0.446 4.454 2.442 2.726e-02 0.313 -3.581 ARMCX5 armadillo repeat containing, X-linked 5 X 101740813 BC022066 Xq22.1-q22.3 Hs.522729 5

binding

 
202347_s_at -0.325 7.548 -2.442 2.728e-02 0.313 -3.581 UBE2K ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast) 4 39376058 AB022435 4p14 Hs.50308 Hs.714332 20

nucleotide binding

ubiquitin-protein ligase activity

protein binding

ATP binding

cytoplasm

ubiquitin-dependent protein catabolic process

ligase activity

ubiquitin protein ligase binding

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

226474_at 0.415 5.782 2.442 2.728e-02 0.313 -3.582 NLRC5 NLR family, CARD domain containing 5 16 55580910 AA005023 16q13 Hs.528836 3

nucleotide binding

protein binding

ATP binding

cytoplasm

 
207213_s_at -0.647 7.347 -2.442 2.729e-02 0.313 -3.582 USP2 ubiquitin specific peptidase 2 11 -118731134, -118731134 NM_004205 11q23.3 Hs.524085 15

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

protein binding

cytoplasm

plasma membrane

ubiquitin-dependent protein catabolic process

peptidase activity

 
219706_at -0.391 6.858 -2.441 2.732e-02 0.314 -3.583 C20orf29 chromosome 20 open reading frame 29 20 3749202 NM_018347 20p13 Hs.104806 4    
1564713_a_at 0.254 5.384 2.441 2.735e-02 0.314 -3.584 FOXN4 forkhead box N4 12 -108200165 AF425597 12q24.11 Hs.528316 6

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

sequence-specific DNA binding

 
232965_at -0.214 4.048 -2.440 2.738e-02 0.314 -3.585 LOC400684 hypothetical gene supported by BC000922 19   BC000922 19q13.11 Hs.438766 1    
219854_at 0.448 5.260 2.440 2.739e-02 0.314 -3.585 ZNF14 zinc finger protein 14 19 -19682280 NM_021030 19p13.3-p13.2 Hs.659932 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
219027_s_at -0.333 7.450 -2.440 2.739e-02 0.314 -3.585 MYO9A myosin IXA 15 -69905414 NM_006901 15q22-q23 Hs.546268 8

nucleotide binding

motor activity

actin binding

GTPase activator activity

protein binding

ATP binding

intracellular

intracellular signaling cascade

visual perception

zinc ion binding

membrane

integral to membrane

myosin complex

diacylglycerol binding

metal ion binding

 
232907_at 0.288 6.143 2.439 2.741e-02 0.314 -3.586 UBR4 ubiquitin protein ligase E3 component n-recognin 4 1 -19273586 AU145867 1p36.13 Hs.148078 Hs.649405 11

ubiquitin-protein ligase activity

calmodulin binding

nucleus

cytoplasm

cytoskeleton

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

interspecies interaction between organisms

metal ion binding

 
226775_at -0.549 6.845 -2.439 2.742e-02 0.314 -3.586 ENY2 enhancer of yellow 2 homolog (Drosophila) 8 110415811 N30904 8q23.1 Hs.492555 5

SAGA complex

nucleus

transport

chromatin modification

histone deubiquitination

ligand-dependent nuclear receptor transcription coactivator activity

regulation of transcription

positive regulation of transcription, DNA-dependent

mRNA transport

 
212515_s_at -0.712 8.010 -2.439 2.742e-02 0.314 -3.586 DDX3X DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked X 41077594 BG492602 Xp11.3-p11.23 Hs.719127 34

nucleotide binding

DNA binding

RNA binding

ATP-dependent RNA helicase activity

helicase activity

protein binding

ATP binding

nucleus

cytoplasm

plasma membrane

nuclear speck

hydrolase activity

interspecies interaction between organisms

RIG-I-like receptor signaling pathway

231223_at 0.530 3.489 2.439 2.743e-02 0.314 -3.586 CSMD1 CUB and Sushi multiple domains 1 8 -2780281 R41565 8p23.2 Hs.571466 22

membrane

integral to membrane

 
201533_at -0.343 9.202 -2.439 2.744e-02 0.314 -3.587 CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 3 41215945 NM_001904 3p21 Hs.476018 680

negative regulation of transcription from RNA polymerase II promoter

skeletal system development

patterning of blood vessels

gastrulation with mouth forming second

endoderm formation

cell fate specification

endodermal cell fate commitment

epithelial to mesenchymal transition

chromatin binding

double-stranded DNA binding

transcription factor activity

transcription coactivator activity

signal transducer activity

membrane fraction

nucleus

transcription factor complex

cytoplasm

centrosome

cytosol

cytoskeleton

plasma membrane

fascia adherens

apoptosis

cell-matrix adhesion

synaptic transmission

ectoderm development

glial cell fate determination

heart development

protein C-terminus binding

transcription factor binding

anterior/posterior axis specification

dorsal/ventral axis specification

proximal/distal pattern formation

positive regulation of specific transcription from RNA polymerase II promoter

positive regulation of heparan sulfate proteoglycan biosynthetic process

basolateral plasma membrane

lateral plasma membrane

morphogenesis of embryonic epithelium

cell-cell adhesion

catenin complex

kinase binding

protein phosphatase binding

Z disc

lamellipodium

hemopoiesis

lung development

androgen receptor signaling pathway

positive regulation of epithelial cell differentiation

beta-catenin destruction complex

forebrain development

regulation of centriole-centriole cohesion

pancreas development

microvillus membrane

negative regulation of chondrocyte differentiation

T cell differentiation in the thymus

cellular protein localization

Axin-APC-beta-catenin-GSK3B complex

embryonic hindlimb morphogenesis

embryonic arm morphogenesis

regulation of cell proliferation

odontogenesis of dentine-containing tooth

embryonic digit morphogenesis

apical junction complex

positive regulation of MAPKKK cascade

apical part of cell

alpha-catenin binding

cadherin binding

bone resorption

positive regulation of osteoblast differentiation

negative regulation of osteoclast differentiation

cell maturation

synaptic vesicle transport

thymus development

camera-type eye morphogenesis

androgen receptor binding

synapse organization

Wnt receptor signaling pathway through beta-catenin

beta-catenin-TCF7L2 complex

I-SMAD binding

Wnt signaling pathway

Focal adhesion

Adherens junction

Tight junction

Leukocyte transendothelial migration

Melanogenesis

Pathogenic Escherichia coli infection - EHEC

Pathways in cancer

Colorectal cancer

Endometrial cancer

Prostate cancer

Thyroid cancer

Basal cell carcinoma

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

1553067_a_at 0.279 3.717 2.439 2.744e-02 0.314 -3.587 GNRHR2 gonadotropin-releasing hormone (type 2) receptor 2 1 -144221176 NM_057163 1q12 Hs.711567 Hs.714903 12

receptor activity

G-protein coupled receptor activity

gonadotropin-releasing hormone receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

integral to membrane

 
204831_at -0.496 6.772 -2.438 2.747e-02 0.314 -3.588 CDK8 cyclin-dependent kinase 8 13 25726755 R59697 13q12 Hs.382306 38

nucleotide binding

cyclin-dependent protein kinase activity

protein binding

ATP binding

nucleus

protein amino acid phosphorylation

RNA polymerase II carboxy-terminal domain kinase activity

transferase activity

regulation of transcription

 
210228_at 0.239 5.771 2.438 2.751e-02 0.315 -3.589 CSF2 colony stimulating factor 2 (granulocyte-macrophage) 5 131437383 M11734 5q31.1 Hs.1349 172

cytokine activity

granulocyte macrophage colony-stimulating factor receptor binding

protein binding

extracellular region

extracellular space

immune response

positive regulation of cell proliferation

positive regulation of foam cell differentiation

positive regulation of tyrosine phosphorylation of Stat5 protein

myeloid dendritic cell differentiation

negative regulation of apoptosis

positive regulation of DNA replication

positive regulation of survival gene product expression

negative regulation of cytolysis

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

Hematopoietic cell lineage

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

Fc epsilon RI signaling pathway

230049_at 0.224 4.975 2.437 2.752e-02 0.315 -3.589 TAF6L TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa 11 62295450 AW303570 11q12.3 Hs.714400 13

histone deacetylase complex

DNA binding

RNA polymerase II transcription factor activity

transcription coactivator activity

histone acetyltransferase activity

protein binding

nucleus

chromatin remodeling

transcription initiation

regulation of transcription from RNA polymerase II promoter

transcription initiation factor activity

STAGA complex

histone H3 acetylation

regulation of transcription factor activity

Basal transcription factors

240967_at -0.544 4.341 -2.437 2.752e-02 0.315 -3.589 KRTAP19-3 keratin associated protein 19-3 21 -30785652 AI288919 21q22.1 Hs.60480 1

intermediate filament

 
219704_at 0.443 7.672 2.437 2.754e-02 0.315 -3.590 YBX2 Y box binding protein 2 17 -7132294 NM_015982 17p11.2-p13.1 Hs.567494 10

DNA binding

RNA binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

spermatogenesis

translational attenuation

 
207700_s_at -0.766 7.525 -2.437 2.755e-02 0.315 -3.590 NCOA3 nuclear receptor coactivator 3 20 45564063 NM_006534 20q12 Hs.592142 140

transcription coactivator activity

histone acetyltransferase activity

signal transducer activity

nucleus

cytoplasm

signal transduction

acyltransferase activity

transferase activity

androgen receptor signaling pathway

transcription regulator activity

positive regulation of transcription, DNA-dependent

thyroid hormone receptor binding

protein N-terminus binding

androgen receptor binding

 
216760_at 0.407 4.730 2.437 2.755e-02 0.315 -3.590 HRASLS2 HRAS-like suppressor 2 11 -63076817 AK025029 11q12.3 Hs.272805 2    
203916_at 0.228 6.513 2.437 2.755e-02 0.315 -3.590 NDST2 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 10 -75231674 NM_003635 10q22 Hs.654758 9

Golgi apparatus

sulfotransferase activity

cellular process

heparan sulfate proteoglycan biosynthetic process

[heparan sulfate]-glucosamine N-sulfotransferase activity

membrane

integral to membrane

transferase activity

hydrolase activity

Heparan sulfate biosynthesis

Metabolic pathways

201779_s_at -0.441 9.059 -2.437 2.757e-02 0.315 -3.591 RNF13 ring finger protein 13 3 151013164 AF070558 3q25.1 Hs.12333 Hs.712766 10

protein binding

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
220492_s_at 0.251 3.639 2.436 2.760e-02 0.315 -3.592 OTOF otoferlin 2 -26533575, -26533575 NM_004802 2p23.1 Hs.91608 17

molecular_function

calcium ion binding

membrane fraction

endoplasmic reticulum

cytosol

plasma membrane

membrane fusion

sensory perception of sound

integral to membrane

cell junction

cytoplasmic vesicle

synapse

 
200732_s_at -0.544 10.872 -2.436 2.761e-02 0.315 -3.592 PTP4A1 protein tyrosine phosphatase type IVA, member 1 6 64339878 AL578310 6q12 Hs.227777 Hs.706850 28

protein tyrosine phosphatase activity

cytoplasm

early endosome

endoplasmic reticulum

spindle

plasma membrane

protein amino acid dephosphorylation

cell cycle

multicellular organismal development

hydrolase activity

 
218507_at 0.326 5.653 2.435 2.763e-02 0.315 -3.593 C7orf68 chromosome 7 open reading frame 68 7 127883119 NM_013332 7q32.1 Hs.710088 9

molecular_function

cellular_component

response to stress

membrane

integral to membrane

 
221240_s_at 0.292 6.534 2.435 2.764e-02 0.315 -3.593 B3GNT4 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 12 121254180 NM_030765 12q24 Hs.363315 5

Golgi apparatus

protein amino acid glycosylation

galactosyltransferase activity

membrane

integral to membrane

transferase activity, transferring glycosyl groups

Glycosphingolipid biosynthesis - lacto and neolacto series

Metabolic pathways

201158_at -0.328 5.670 -2.435 2.765e-02 0.315 -3.593 NMT1 N-myristoyltransferase 1 17 40494205 AI570834 17q21.31 Hs.532790 58

in utero embryonic development

glycylpeptide N-tetradecanoyltransferase activity

cellular_component

cytoplasm

cytosol

N-terminal protein myristoylation

protein lipoylation

transferase activity

 
214681_at 0.213 4.794 2.435 2.766e-02 0.315 -3.594 GK glycerol kinase X 30581396 AI830490 Xp21.3 Hs.1466 20

nucleotide binding

glycerol kinase activity

glycerol kinase activity

ATP binding

cytoplasm

mitochondrion

mitochondrial outer membrane

cytosol

carbohydrate metabolic process

glycerol-3-phosphate metabolic process

membrane

transferase activity

Glycerolipid metabolism

Metabolic pathways

PPAR signaling pathway

226656_at -0.390 8.006 -2.434 2.770e-02 0.316 -3.595 CRTAP cartilage associated protein 3 33130453 AW024741 3p22.3 Hs.719160 10

extracellular region

proteinaceous extracellular matrix

 
216181_at 0.279 6.489 2.434 2.772e-02 0.316 -3.596 SYNJ2 synaptojanin 2 6 158322906 AK026758 6q25.3 Hs.434494 18

RNA binding

inositol or phosphatidylinositol phosphatase activity

phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity

protein binding

membrane

dephosphorylation

hydrolase activity

Inositol phosphate metabolism

Metabolic pathways

Phosphatidylinositol signaling system

238616_at 0.305 4.654 2.434 2.772e-02 0.316 -3.596 QDPR quinoid dihydropteridine reductase 4 -17097117 AA844132 4p15.31 Hs.75438 37

6,7-dihydropteridine reductase activity

binding

cytoplasm

cellular amino acid metabolic process

tetrahydrobiopterin biosynthetic process

electron carrier activity

oxidoreductase activity

dihydrobiopterin metabolic process

oxidation reduction

Folate biosynthesis

Metabolic pathways

211072_x_at -0.549 10.538 -2.434 2.773e-02 0.316 -3.596 TUBA1B tubulin, alpha 1b 12 -47807832 BC006481 12q13.12 Hs.524390 Hs.719075 42

nucleotide binding

microtubule cytoskeleton organization

GTPase activity

structural constituent of cytoskeleton

protein binding

GTP binding

microtubule

microtubule-based movement

protein complex

protein polymerization

Gap junction

Pathogenic Escherichia coli infection - EHEC

205163_at -0.703 13.398 -2.433 2.774e-02 0.316 -3.596 MYLPF myosin light chain, phosphorylatable, fast skeletal muscle 16 30293623 NM_013292 16p11.2 Hs.50889 5

motor activity

calcium ion binding

muscle myosin complex

skeletal muscle tissue development

structural constituent of muscle

myosin complex

Focal adhesion

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

201444_s_at -0.654 6.748 -2.433 2.778e-02 0.316 -3.598 ATP6AP2 ATPase, H+ transporting, lysosomal accessory protein 2 X 40325159 NM_005765 Xp11.4 Hs.495960 17

angiotensin maturation

receptor activity

protein binding

external side of plasma membrane

membrane

integral to membrane

positive regulation of transforming growth factor-beta1 production

regulation of MAPKKK cascade

 
200037_s_at -0.336 9.593 -2.432 2.783e-02 0.317 -3.599 CBX3 chromobox homolog 3 (HP1 gamma homolog, Drosophila) 7 26207623, 26207848 NM_016587 7p15.2 Hs.381189 Hs.706294 45

condensed chromosome, centromeric region

chromatin

chromatin binding

nucleus

nuclear inner membrane

polytene chromosome chromocenter

nuclear euchromatin

spindle

chromatin assembly or disassembly

chromatin remodeling

negative regulation of transcription

general transcriptional repressor activity

enzyme binding

protein domain specific binding

nuclear centromeric heterochromatin

 
209030_s_at 0.584 6.414 2.432 2.784e-02 0.317 -3.600 CADM1 cell adhesion molecule 1 11 -114549554 NM_014333 11q23.2 Hs.370510 50

T cell mediated cytotoxicity

receptor binding

receptor binding

plasma membrane

cell-cell junction

apoptosis

immune response

cell adhesion

homophilic cell adhesion

heterophilic cell adhesion

multicellular organismal development

spermatogenesis

protein C-terminus binding

cell recognition

cell recognition

integral to membrane

basolateral plasma membrane

cell differentiation

PDZ domain binding

susceptibility to natural killer cell mediated cytotoxicity

susceptibility to natural killer cell mediated cytotoxicity

protein homodimerization activity

positive regulation of cytokine secretion

activated T cell proliferation

detection of stimulus

detection of stimulus

Cell adhesion molecules (CAMs)

209005_at 0.297 7.759 2.431 2.785e-02 0.317 -3.600 FBXL5 F-box and leucine-rich repeat protein 5 4 -15215251 AF157323 4p15.32 Hs.643433 13

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

protein ubiquitination

modification-dependent protein catabolic process

 
218235_s_at -0.494 10.276 -2.431 2.789e-02 0.317 -3.601 UTP11L UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast) 1 38250970 NM_016037 1p34.3 Hs.472038 Hs.637686 11

protein binding

extracellular space

nucleus

nucleolus

cytoplasm

rRNA processing

induction of apoptosis

nervous system development

small-subunit processome

nerve growth factor receptor signaling pathway

 
209394_at -0.467 5.788 -2.431 2.790e-02 0.317 -3.601 ASMTL acetylserotonin O-methyltransferase-like X, Y -1482031, -1482031 BC002508 Xp22.3 Yp11.3 Hs.533514 10

cellular_component

cytoplasm

acetylserotonin O-methyltransferase activity

melatonin biosynthetic process

 
207408_at 0.296 6.398 2.430 2.794e-02 0.317 -3.603 SLC22A14 solute carrier family 22, member 14 3 38322448 NM_004803 3p21.3 Hs.165559 5

integral to plasma membrane

organic cation transmembrane transporter activity

organic cation transport

membrane

 
239173_at -0.408 5.119 -2.430 2.795e-02 0.317 -3.603 INADL InaD-like (Drosophila) 1 61980736 AI697184 1p31.3 Hs.478125 24

protein binding

cellular_component

plasma membrane

tight junction

intracellular signaling cascade

apical plasma membrane

cell junction

Tight junction

235551_at -0.268 3.803 -2.429 2.796e-02 0.318 -3.603 WDR4 WD repeat domain 4 21 -43142404, -43136272 AA555280 21q22.3 Hs.248815 10

protein binding

nucleus

nucleoplasm

cytoplasm

tRNA modification

tRNA (guanine-N7-)-methyltransferase activity

 
222624_s_at -0.543 5.890 -2.429 2.797e-02 0.318 -3.604 ZNF639 zinc finger protein 639 3 180524244 AA224199 3q26.33 Hs.632578 5

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
219986_s_at 0.267 6.479 2.429 2.801e-02 0.318 -3.605 ACAD10 acyl-Coenzyme A dehydrogenase family, member 10 12 110608239, 110608239 NM_025247 12q24.12 Hs.331141 6

acyl-CoA dehydrogenase activity

metabolic process

electron carrier activity

hydrolase activity

FAD binding

 
241899_at 0.302 5.396 2.428 2.801e-02 0.318 -3.605 LOC553103 hypothetical LOC553103     AA524418   Hs.633421 1    
221029_s_at 0.256 4.037 2.428 2.802e-02 0.318 -3.605 WNT5B wingless-type MMTV integration site family, member 5B 12 1596482, 1608672 NM_030775 12p13.3 Hs.306051 11

signal transducer activity

extracellular region

proteinaceous extracellular matrix

Wnt receptor signaling pathway, calcium modulating pathway

multicellular organismal development

Wnt signaling pathway

Hedgehog signaling pathway

Melanogenesis

Pathways in cancer

Basal cell carcinoma

232536_at 0.233 5.762 2.428 2.805e-02 0.318 -3.606 C21orf30 chromosome 21 open reading frame 30 21   AL117578 21q22.3 Hs.542533 2

nucleus

 
214295_at 0.315 4.094 2.428 2.806e-02 0.318 -3.607 KIAA0485 hypothetical LOC57235     AW129056   Hs.604754 1    
201465_s_at -0.665 6.572 -2.427 2.810e-02 0.318 -3.608 JUN jun oncogene 1 -59019050 BC002646 1p32-p31 Hs.714791 443

nuclear chromosome

transcription factor activity

RNA polymerase II transcription factor activity

Rho GTPase activator activity

nucleus

transcription factor complex

cytosol

regulation of transcription, DNA-dependent

transforming growth factor beta receptor signaling pathway

SMAD protein nuclear translocation

transcription factor binding

negative regulation of cell proliferation

cellular process

promoter binding

negative regulation of protein amino acid autophosphorylation

leading edge cell differentiation

response to drug

positive regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

protein dimerization activity

regulation of cell cycle

SMAD protein signal transduction

R-SMAD binding

MAPK signaling pathway

ErbB signaling pathway

Wnt signaling pathway

Focal adhesion

Toll-like receptor signaling pathway

T cell receptor signaling pathway

B cell receptor signaling pathway

Neurotrophin signaling pathway

GnRH signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

209721_s_at -0.412 7.258 -2.427 2.810e-02 0.318 -3.608 IFFO1 intermediate filament family orphan 1 12 -6518954, -6518954 BC002857 12p13.3 Hs.15243 7

intermediate filament

 
221166_at 0.258 4.274 2.427 2.811e-02 0.319 -3.608 FGF23 fibroblast growth factor 23 12 -4347653 NM_020638 12p13.3 Hs.287370 83

extracellular region

extracellular region

extracellular space

growth factor activity

fibroblast growth factor receptor signaling pathway

cell differentiation

regulation of bone mineralization

cellular phosphate ion homeostasis

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

236666_s_at 0.307 6.521 2.426 2.812e-02 0.319 -3.608 LOC390205 leucine rich repeat containing 10-like 11 61032847 AA923289 11q12.2 Hs.441122 1

protein binding

 
229407_at 0.327 3.411 2.426 2.812e-02 0.319 -3.609 SDK1 sidekick homolog 1, cell adhesion molecule (chicken) 7 3307605, 4135842 AF131799 7p22.2 Hs.653013 7

protein binding

cell adhesion

membrane

integral to membrane

 
223589_at 0.313 5.059 2.426 2.813e-02 0.319 -3.609 ZNF416 zinc finger protein 416 19 -62774745 BC000130 19q13.4 Hs.247711 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
224800_at -0.401 7.481 -2.426 2.815e-02 0.319 -3.609 WDFY1 WD repeat and FYVE domain containing 1 2 -224448308 AK022888 2q36.1 Hs.708107 5

phosphatidylinositol binding

nucleus

early endosome

cytosol

biological_process

zinc ion binding

metal ion binding

 
214336_s_at 0.277 4.822 2.426 2.816e-02 0.319 -3.610 COPA coatomer protein complex, subunit alpha 1 -158525000 AI621079 1q23-q25 Hs.162121 Hs.685025 30

hormone activity

structural molecule activity

calcium ion binding

extracellular region

extracellular space

soluble fraction

cytoplasm

endoplasmic reticulum

microsome

Golgi apparatus

cytosol

protein folding

intracellular protein transport

retrograde vesicle-mediated transport, Golgi to ER

membrane

membrane organization

vesicle-mediated transport

membrane coat

COPI vesicle coat

pancreatic juice secretion

cytoplasmic vesicle

COPI coating of Golgi vesicle

unfolded protein binding

 
41856_at 0.243 7.104 2.426 2.817e-02 0.319 -3.610 UNC5B unc-5 homolog B (C. elegans) 10 72642303 AL049370 10q22.1 Hs.522997 12

receptor activity

protein binding

apoptosis

signal transduction

multicellular organismal development

membrane

integral to membrane

Axon guidance

227428_at -0.374 6.929 -2.425 2.818e-02 0.319 -3.610 GABPA GA binding protein transcription factor, alpha subunit 60kDa 21 26029199 BE876628 21q21-q22.1 21q21.3 Hs.246310 Hs.473470 34

negative regulation of transcription from RNA polymerase II promoter

in utero embryonic development

transcription factor activity

RNA polymerase II transcription factor activity

transcription coactivator activity

protein binding

nucleus

nucleolus

sequence-specific DNA binding

 
216266_s_at -0.546 5.467 -2.425 2.822e-02 0.319 -3.612 ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) 8 -68272450 AK025637 8q13 Hs.656902 22

ARF guanyl-nucleotide exchange factor activity

binding

intracellular

exocytosis

ARF GTPase activator activity

myosin binding

regulation of ARF protein signal transduction

 
202708_s_at -0.619 8.067 -2.424 2.825e-02 0.319 -3.612 HIST2H2BE histone cluster 2, H2be 1 -148122633 NM_003528 1q21-q23 Hs.2178 50

nucleosome

DNA binding

protein binding

nucleus

chromosome

nucleosome assembly

defense response to bacterium

Systemic lupus erythematosus

203675_at -0.451 6.775 -2.424 2.825e-02 0.319 -3.613 NUCB2 nucleobindin 2 11 17254861 NM_005013 11p15.1-p14 Hs.654599 15

DNA binding

calcium ion binding

extracellular region

extracellular space

nucleus

nuclear outer membrane

cytoplasm

endoplasmic reticulum

ER-Golgi intermediate compartment

Golgi apparatus

cytosol

plasma membrane

 
211090_s_at -1.025 5.105 -2.423 2.829e-02 0.319 -3.614 PRPF4B PRP4 pre-mRNA processing factor 4 homolog B (yeast) 6 3966567 Z25435 6p25.2 Hs.159014 20

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

spliceosomal complex

chromosome

mRNA processing

protein amino acid phosphorylation

RNA splicing

transferase activity

 
1561434_at 0.315 3.507 2.423 2.830e-02 0.319 -3.614 C15orf45 chromosome 15 open reading frame 45 15   AI956139 15q13.3 Hs.711585 2    
201230_s_at -0.462 7.925 -2.423 2.830e-02 0.319 -3.614 ARIH2 ariadne homolog 2 (Drosophila) 3 48931284 NM_006321 3p21.2-p21.3 Hs.633601 14

nucleic acid binding

protein binding

nucleus

ubiquitin-dependent protein catabolic process

multicellular organismal development

zinc ion binding

metal ion binding

 
1564307_a_at 0.339 2.847 2.423 2.831e-02 0.319 -3.614 A2ML1 alpha-2-macroglobulin-like 1 12 8866416 AL832750 12p13.31 Hs.620532 8

serine-type endopeptidase inhibitor activity

protein binding

extracellular region

extracellular space

regulation of endopeptidase activity

 
204378_at 0.300 5.673 2.423 2.834e-02 0.320 -3.615 BCAS1 breast carcinoma amplified sequence 1 20 -51993485 NM_003657 20q13.2 Hs.400556 12

protein binding

cytoplasm

 
232160_s_at -0.384 6.866 -2.422 2.834e-02 0.320 -3.615 TNIP2 TNFAIP3 interacting protein 2 4 -2713184, -2713184 AL137262 4p16.3 Hs.719161 20

protein binding

cytoplasm

I-kappaB kinase/NF-kappaB cascade

 
238441_at -0.613 9.214 -2.422 2.837e-02 0.320 -3.616 PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit 1 56883577 AI928203 1p31 Hs.437039 67

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

nucleoplasm

cytosol

protein amino acid phosphorylation

fatty acid biosynthetic process

cholesterol biosynthetic process

signal transduction

transferase activity

regulation of fatty acid oxidation

Regulation of autophagy

mTOR signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

Hypertrophic cardiomyopathy (HCM)

220083_x_at -0.462 4.969 -2.422 2.837e-02 0.320 -3.616 UCHL5 ubiquitin carboxyl-terminal hydrolase L5 1 -191251521 NM_016017 1q32 Hs.591458 15

ubiquitin thiolesterase activity

protein binding

intracellular

cytosol

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

protein complex

 
1553593_a_at -0.649 6.101 -2.422 2.838e-02 0.320 -3.616 TAL2 T-cell acute lymphocytic leukemia 2 9 107464558 NM_005421 9q32 Hs.247978 9

DNA binding

protein binding

nucleus

behavior

post-embryonic development

thalamus development

transcription regulator activity

midbrain development

multicellular organism growth

regulation of transcription

 
217799_x_at -0.345 7.183 -2.421 2.840e-02 0.320 -3.617 UBE2H ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) 7 -129260230 NM_003344 7q32 Hs.643548 16

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ubiquitin-dependent protein catabolic process

protein ubiquitination

ligase activity

regulation of protein metabolic process

Ubiquitin mediated proteolysis

217434_at 0.257 2.870 2.421 2.840e-02 0.320 -3.617 MC2R melanocortin 2 receptor (adrenocorticotropic hormone) 18 -13872042 Y10259 18p11.2 Hs.248144 50

receptor activity

G-protein coupled receptor activity

adrenocorticotropin receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein signaling, coupled to cyclic nucleotide second messenger

Neuroactive ligand-receptor interaction

206142_at 0.420 2.842 2.421 2.840e-02 0.320 -3.617 ZNF135 zinc finger protein 135 19 63262423 NM_003436 19q13.4 Hs.85863 6

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
221268_s_at -0.703 3.594 -2.421 2.841e-02 0.320 -3.618 SGPP1 sphingosine-1-phosphate phosphatase 1 14 -63220687 NM_030791 14q23.2 Hs.24678 11

membrane fraction

endoplasmic reticulum

sphingolipid metabolic process

sphinganine-1-phosphate metabolic process

sphingosine metabolic process

apoptosis

membrane

integral to membrane

hydrolase activity

sphingosine-1-phosphate phosphatase activity

Sphingolipid metabolism

201148_s_at 0.305 7.204 2.421 2.842e-02 0.320 -3.618 TIMP3 TIMP metallopeptidase inhibitor 3 22 31526801 AW338933 22q12.1-q13.2 22q12.3 Hs.644633 Hs.714168 117

enzyme inhibitor activity

protein binding

extracellular region

basement membrane

visual perception

metalloendopeptidase inhibitor activity

response to organic cyclic substance

tissue regeneration

response to estrogen stimulus

response to stimulus

negative regulation of membrane protein ectodomain proteolysis

 
237755_s_at 0.231 3.810 2.421 2.842e-02 0.320 -3.618 WDR16 WD repeat domain 16 17 9420668 AW673231 17p13.1 Hs.232270 5

protein binding

cytoplasm

 
218409_s_at -0.288 6.685 -2.421 2.844e-02 0.320 -3.618 DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 10 -22085482 NM_022365 10p12.31 Hs.499000 8

ATPase activator activity

DNA binding

nucleus

endoplasmic reticulum

microsome

regulation of translation

protein folding

membrane

integral to membrane

heat shock protein binding

negative regulation of proteolysis

regulation of protein secretion

unfolded protein binding

chaperone binding

 
211191_at 0.235 4.078 2.421 2.844e-02 0.320 -3.619 CD84 CD84 molecule 1 -158782410 AF054818 1q24 Hs.398093 23

receptor activity

protein binding

plasma membrane

integral to plasma membrane

defense response

cell adhesion

homophilic cell adhesion

 
220253_s_at -0.803 5.164 -2.420 2.846e-02 0.320 -3.619 LRP12 low density lipoprotein-related protein 12 8 -105570642 NM_013437 8q22.2-q23.1 Hs.600630 8

receptor activity

low-density lipoprotein receptor activity

protein binding

nucleolus

cytoplasm

plasma membrane

integral to plasma membrane

coated pit

endocytosis

signal transduction

regulation of growth

 
214669_x_at 0.429 5.412 2.420 2.846e-02 0.320 -3.619 IGKC immunoglobulin kappa constant 2   BG485135 2p12 Hs.449621 Hs.703932 31

antigen binding

protein binding

extracellular region

extracellular region

immune response

 
231126_at 0.205 4.946 2.420 2.847e-02 0.320 -3.619 C2orf70 chromosome 2 open reading frame 70 2 26638984 AA778539 2p23.3 Hs.407083 1    
202447_at 0.480 10.373 2.420 2.848e-02 0.320 -3.620 DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 8 91082755 NM_001359 8q21.3 Hs.492212 22

binding

mitochondrion

fatty acid beta-oxidation

fatty acid beta-oxidation

2,4-dienoyl-CoA reductase (NADPH) activity

2,4-dienoyl-CoA reductase (NADPH) activity

oxidoreductase activity

protein homotetramerization

oxidation reduction

NADPH binding

 
229743_at -0.277 6.571 -2.420 2.850e-02 0.320 -3.620 ZNF438 zinc finger protein 438 10 -31173572, -31173572 AI886666 10p11.23-p11.22 Hs.660642 6

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
212390_at -0.357 12.038 -2.419 2.851e-02 0.320 -3.621 PDE4DIP phosphodiesterase 4D interacting protein 1 -143663117, -143663117, -143601947, -143601947, -143562783 AB007923 1q12 Hs.584841 Hs.613082 Hs.657186 Hs.657490 Hs.719077 10

nucleus

cytoplasm

Golgi apparatus

centrosome

 
205986_at 0.303 5.830 2.419 2.852e-02 0.320 -3.621 AATK apoptosis-associated tyrosine kinase 17 -76705690 NM_004920 17q25.3 Hs.514575 15

nucleotide binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

cytoplasm

mitochondrion

protein amino acid phosphorylation

membrane

integral to membrane

transferase activity

perinuclear region of cytoplasm

 
216503_s_at 0.490 4.920 2.419 2.853e-02 0.320 -3.621 MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 10 21863107, 21863579 AF060927 10p12 Hs.30385 19

transcription factor activity

protein binding

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
1554290_at -0.401 3.054 -2.419 2.853e-02 0.320 -3.621 HERC3 hect domain and RLD 3 4 89732669 BC038960 4q21 Hs.35804 7

intracellular

cytoplasm

protein modification process

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

cytoplasmic vesicle

Ubiquitin mediated proteolysis

210183_x_at -0.397 10.622 -2.419 2.854e-02 0.320 -3.622 PNN pinin, desmosome associated protein 14 38714137 AF112222 14q21.1 Hs.409965 30

DNA binding

structural molecule activity

protein binding

nucleus

spliceosomal complex

nucleolus

cytoplasm

intermediate filament

plasma membrane

mRNA processing

cell adhesion

RNA splicing

nuclear speck

desmosome

regulation of transcription

 
203694_s_at -0.320 7.166 -2.419 2.855e-02 0.320 -3.622 DHX16 DEAH (Asp-Glu-Ala-His) box polypeptide 16 6 -30728885, -2069456, -1867754 NM_003587 6p21.3 Hs.485060 9

nucleotide binding

nucleic acid binding

RNA helicase activity

ATP binding

nucleus

mRNA processing

ATP-dependent helicase activity

RNA splicing

hydrolase activity

 
202125_s_at -0.456 7.220 -2.419 2.855e-02 0.320 -3.622 TRAK2 trafficking protein, kinesin binding 2 2 -201950174 NM_015049 2q33 Hs.152774 16

cytoplasm

plasma membrane

GABA receptor binding

 
222862_s_at 0.263 4.387 2.419 2.856e-02 0.320 -3.622 AK5 adenylate kinase 5 1 77520329, 77520874 BG169832 1p31 Hs.559718 5

nucleotide binding

adenylate kinase activity

ATP binding

cytoplasm

cytosol

cytosol

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

ADP biosynthetic process

dADP biosynthetic process

pyrimidine ribonucleotide biosynthetic process

transferase activity

nucleoside kinase activity

ATP metabolic process

Purine metabolism

Metabolic pathways

1554627_a_at -0.504 6.823 -2.419 2.856e-02 0.320 -3.622 ASCC1 activating signal cointegrator 1 complex subunit 1 10 -73526283 BC012291 10pter-q25.3 Hs.500007 7

RNA binding

cytoplasm

regulation of transcription

 
236909_at 0.309 3.093 2.418 2.857e-02 0.320 -3.623 C2orf77 chromosome 2 open reading frame 77 2 -170210180 AW339899 2q31.1 Hs.370111 2    
202041_s_at 0.366 8.116 2.418 2.862e-02 0.321 -3.624 FIBP fibroblast growth factor (acidic) intracellular binding protein 11 -65407786 NM_004214 11q13.1 Hs.7768 10

protein binding

membrane fraction

nucleus

mitochondrion

fibroblast growth factor receptor signaling pathway

membrane

fibroblast growth factor binding

 
210290_at -0.294 4.178 -2.417 2.864e-02 0.321 -3.625 ZNF174 zinc finger protein 174 16 3391190, 3391190 BC001161 16p13.3 Hs.155204 9

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

protein binding

intracellular

nucleus

nucleolus

cytoplasm

cytoskeleton

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
204697_s_at 0.210 3.708 2.417 2.865e-02 0.321 -3.625 CHGA chromogranin A (parathyroid secretory protein 1) 14 92459197 NM_001275 14q32 Hs.150793 96

calcium ion binding

extracellular region

regulation of blood pressure

 
207939_x_at -0.292 7.544 -2.417 2.865e-02 0.321 -3.625 RNPS1 RNA binding protein S1, serine-rich domain 16 -2243122, -2243122 NM_006711 16p13.3 Hs.355643 30

nucleotide binding

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

cytoplasm

transcription

RNA splicing

nuclear speck

 
222683_at -0.431 7.976 -2.417 2.868e-02 0.321 -3.626 RNF20 ring finger protein 20 9 103335953 AK022532 9q22 Hs.656088 19

ubiquitin ligase complex

protein polyubiquitination

p53 binding

transcription coactivator activity

ubiquitin-protein ligase activity

nucleus

chromosome

nucleolus

ubiquitin-dependent protein catabolic process

zinc ion binding

histone monoubiquitination

chromatin modification

ligase activity

negative regulation of cell migration

ubiquitin protein ligase binding

regulation of gene-specific transcription

histone H2B ubiquitination

histone H3-K79 methylation

histone binding

positive regulation of transcription

metal ion binding

histone H3-K4 methylation

 
201489_at 0.495 9.307 2.416 2.868e-02 0.321 -3.626 PPIF peptidylprolyl isomerase F 10 80777225 BC005020 10q22-q23 Hs.381072 13

peptidyl-prolyl cis-trans isomerase activity

membrane fraction

mitochondrion

mitochondrial matrix

protein folding

isomerase activity

peptide binding

 
233535_at 0.296 4.652 2.416 2.869e-02 0.321 -3.626 ATP13A4 ATPase type 13A4 3 -194602559 AL512736 3q29 Hs.674423 4

nucleotide binding

magnesium ion binding

ATP binding

ATP biosynthetic process

cation transport

ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism

membrane

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

ATPase activity

 
1562303_at 0.218 2.667 2.416 2.869e-02 0.321 -3.626 ZKSCAN3 zinc finger with KRAB and SCAN domains 3 6 28425669 AK091225 6p22.1 Hs.485004 11

transcription factor activity

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
217480_x_at 0.367 5.937 2.416 2.869e-02 0.321 -3.626 IGKV1OR15-118 immunoglobulin kappa variable 1/OR15-118 pseudogene 2   M20812 2p11.1   1    
208119_s_at 0.495 5.278 2.416 2.870e-02 0.321 -3.627 ZNF93 zinc finger protein 93 19 19872786 NM_031218 19p12 Hs.301059 5

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
227367_at 0.291 5.148 2.416 2.870e-02 0.321 -3.627 SLCO3A1 solute carrier organic anion transporter family, member 3A1 15 90197941, 90197941 AW976431 15q26 Hs.311187 10

transporter activity

ion transport

membrane

integral to membrane

 
218604_at -0.336 7.313 -2.416 2.870e-02 0.321 -3.627 LEMD3 LEM domain containing 3 12 63849637 NM_014319 12q14 Hs.718513 13

nucleotide binding

DNA binding

membrane fraction

nucleus

nuclear envelope

integral to nuclear inner membrane

membrane

integral to membrane

 
221074_at 0.279 5.364 2.416 2.871e-02 0.321 -3.627 NCR2 natural cytotoxicity triggering receptor 2 6 41411505 NM_004828 6p21.1 Hs.194721 16

transmembrane receptor activity

plasma membrane

integral to plasma membrane

cellular defense response

signal transduction

Natural killer cell mediated cytotoxicity

1555687_a_at -0.224 2.257 -2.416 2.872e-02 0.321 -3.627 CLEC4C C-type lectin domain family 4, member C 12 -7773277 AF325460 12p13.2-p12.3 Hs.351812 11

binding

sugar binding

immune response

membrane

integral to membrane

 
1569039_s_at 0.382 2.734 2.415 2.874e-02 0.321 -3.628 ZNF677 zinc finger protein 677 19 -58430449 BC029855 19q13.42 Hs.20506 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
209545_s_at 0.271 5.602 2.415 2.874e-02 0.321 -3.628 RIPK2 receptor-interacting serine-threonine kinase 2 8 90839109 AF064824 8q21 Hs.103755 52

nucleotide binding

protein serine/threonine kinase activity

protein serine/threonine kinase activity

signal transducer activity

protein binding

ATP binding

intracellular

cytoplasm

cytosol

protein amino acid phosphorylation

inflammatory response

signal transduction

transferase activity

LIM domain binding

positive regulation of interleukin-6 production

positive regulation of tumor necrosis factor production

positive regulation of stress-activated MAPK cascade

toll-like receptor 2 signaling pathway

T cell proliferation

positive regulation of apoptosis

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of JNK cascade

CARD domain binding

defense response to Gram-positive bacterium

positive regulation of NF-kappaB transcription factor activity

positive regulation of ERK1 and ERK2 cascade

Neurotrophin signaling pathway

201334_s_at -0.460 9.319 -2.415 2.875e-02 0.321 -3.628 ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 11 119713155 AB002380 11q23.3 Hs.24598 26

G-protein-coupled receptor binding

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

GTPase activator activity

protein binding

intracellular

cytoplasm

G-protein coupled receptor protein signaling pathway

intracellular signaling cascade

membrane

regulation of Rho protein signal transduction

Vascular smooth muscle contraction

Axon guidance

Regulation of actin cytoskeleton

224984_at -0.381 7.901 -2.415 2.875e-02 0.321 -3.628 NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 16 68156497 W61007 16q22.1 Hs.371987 35

cytokine production

transcription factor activity

RNA polymerase II transcription factor activity

protein binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

signal transduction

excretion

positive regulation of transcription from RNA polymerase II promoter

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

1557866_at 0.256 4.542 2.415 2.876e-02 0.321 -3.628 C9orf117 chromosome 9 open reading frame 117 9 129509091 AK094948 9q34.11 Hs.652519 2    
244108_at -0.308 5.389 -2.415 2.877e-02 0.321 -3.629 SYNPO2 synaptopodin 2 4 120029443, 120029443 AL552450 4q26 Hs.655519 14

actin binding

protein binding

nucleus

cytoplasm

 
217945_at -0.250 10.914 -2.415 2.878e-02 0.321 -3.629 BTBD1 BTB (POZ) domain containing 1 15 -81476184 NM_025238 15q24 Hs.459149 15

cytoplasmic mRNA processing body

protein binding

cellular_component

cytoplasm

biological_process

modification-dependent protein catabolic process

protein complex

 
206429_at 0.301 4.361 2.415 2.879e-02 0.321 -3.629 F2RL1 coagulation factor II (thrombin) receptor-like 1 5 76150588 NM_005242 5q13 Hs.154299 138

positive regulation of leukocyte chemotaxis

receptor activity

G-protein coupled receptor activity

receptor binding

Golgi apparatus

plasma membrane

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

elevation of cytosolic calcium ion concentration

thrombin receptor activity

regulation of blood coagulation

positive regulation of positive chemotaxis

Neuroactive ligand-receptor interaction

200714_x_at 0.266 7.818 2.414 2.879e-02 0.321 -3.629 OS9 osteosarcoma amplified 9, endoplasmic reticulum lectin 12 56374152 NM_006812 12q13 Hs.527861 18

protein binding

endoplasmic reticulum lumen

protein ubiquitination

response to endoplasmic reticulum stress

 
235554_x_at -0.487 4.814 -2.414 2.883e-02 0.321 -3.631 PACRGL PARK2 co-regulated-like 4 20311133 BE048198 4p15.31 Hs.479298 5

binding

 
212616_at -0.365 7.963 -2.414 2.885e-02 0.321 -3.631 CHD9 chromodomain helicase DNA binding protein 9 16 51646445 BF668950 16q12.2 Hs.59159 Hs.622347 10

nucleotide binding

chromatin

DNA binding

chromatin binding

helicase activity

protein binding

ATP binding

nucleus

cytoplasm

chromatin assembly or disassembly

chromatin modification

hydrolase activity

regulation of transcription

 
213151_s_at -0.330 9.516 -2.413 2.885e-02 0.321 -3.631 SEPT7 septin 7 7 35807151 AU157515 7p14.3-p14.1 Hs.191346 Hs.642540 23

nucleotide binding

condensed chromosome kinetochore

cytokinesis

stress fiber

structural molecule activity

protein binding

GTP binding

nucleus

cytoplasm

spindle

cell cycle

mitosis

septin complex

protein heterooligomerization

 
220895_at 0.349 3.899 2.413 2.886e-02 0.321 -3.631 USP29 ubiquitin specific peptidase 29 19 62323320 NM_020903 19q13.43 Hs.515632 4

ubiquitin thiolesterase activity

cellular_component

protein modification process

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
215826_x_at 0.515 5.449 2.413 2.889e-02 0.322 -3.632 ZNF835 zinc finger protein 835 19 -61866764 AK023017 19q13.43 Hs.458438 1

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
217908_s_at -0.394 11.028 -2.413 2.890e-02 0.322 -3.632 DCAF6 DDB1 and CUL4 associated factor 6 1 166172531 NM_018442 1q24.2 Hs.435741 10

nucleus

ligand-dependent nuclear receptor transcription coactivator activity

 
222420_s_at -0.599 8.480 -2.413 2.890e-02 0.322 -3.633 UBE2H ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) 7 -129260230 Z29331 7q32 Hs.643548 16

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ubiquitin-dependent protein catabolic process

protein ubiquitination

ligase activity

regulation of protein metabolic process

Ubiquitin mediated proteolysis

1561951_at 0.281 3.062 2.412 2.891e-02 0.322 -3.633 SLC5A12 solute carrier family 5 (sodium/glucose cotransporter), member 12 11 -26645141 BC029048 11p14.2 Hs.148907 3

transporter activity

plasma membrane

ion transport

sodium ion transport

symporter activity

integral to membrane

sodium ion binding

 
200918_s_at -0.326 7.879 -2.412 2.892e-02 0.322 -3.633 SRPR signal recognition particle receptor (docking protein) 11 -125638043 NM_003139 11q24.3 Hs.368376 7

nucleotide binding

GTPase activity

receptor activity

signal recognition particle binding

protein binding

GTP binding

endoplasmic reticulum

signal recognition particle receptor complex

SRP-dependent cotranslational protein targeting to membrane

intracellular protein transport

membrane

integral to membrane

Protein export

210007_s_at -0.484 4.688 -2.412 2.892e-02 0.322 -3.633 GPD2 glycerol-3-phosphate dehydrogenase 2 (mitochondrial) 2 157000210, 157001145 U36310 2q24.1 Hs.512382 20

glycerol-3-phosphate dehydrogenase activity

calcium ion binding

mitochondrion

mitochondrial inner membrane

glycerol-3-phosphate metabolic process

gluconeogenesis

glycerol-3-phosphate dehydrogenase complex

oxidoreductase activity

oxidation reduction

Glycerophospholipid metabolism

226155_at -0.588 7.343 -2.412 2.892e-02 0.322 -3.633 FAM160B1 family with sequence similarity 160, member B1 10 116571492, 116571492 AB046820 10q25.3 Hs.192619 2    
218788_s_at 0.424 6.379 2.412 2.893e-02 0.322 -3.633 SMYD3 SET and MYND domain containing 3 1 -243979266 NM_022743 1q44 Hs.567571 18

protein binding

nucleus

cytoplasm

methyltransferase activity

zinc ion binding

chromatin modification

transferase activity

histone-lysine N-methyltransferase activity

metal ion binding

 
232416_at 0.241 2.468 2.412 2.893e-02 0.322 -3.634 BRUNOL5 bruno-like 5, RNA binding protein (Drosophila) 19 3175700, 3176482 AL390161 19p13 Hs.655747 3

nucleotide binding

RNA binding

nucleus

cytoplasm

mRNA processing

 
1554333_at -1.127 6.512 -2.412 2.895e-02 0.322 -3.634 DNAJA4 DnaJ (Hsp40) homolog, subfamily A, member 4 15 76343541, 76344043, 76345614 BC031044 15q25.1 Hs.513053 5

protein folding

zinc ion binding

membrane

heat shock protein binding

metal ion binding

unfolded protein binding

 
204068_at -0.308 6.685 -2.411 2.896e-02 0.322 -3.635 STK3 serine/threonine kinase 3 (STE20 homolog, yeast) 8 -99536036 NM_006281 8q22.2 Hs.492333 22

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

signal transduction

protein kinase cascade

transferase activity

positive regulation of apoptosis

protein dimerization activity

MAPK signaling pathway

202254_at 0.622 4.103 2.410 2.903e-02 0.322 -3.636 SIPA1L1 signal-induced proliferation-associated 1 like 1 14 71065794 AB007900 14q24.2 Hs.654657 14

molecular_function

GTPase activator activity

protein binding

cellular_component

intracellular

biological_process

regulation of small GTPase mediated signal transduction

 
212129_at -0.338 8.006 -2.410 2.903e-02 0.322 -3.636 NIPA2 non imprinted in Prader-Willi/Angelman syndrome 2 15 -20556787 AI589507 15q11.2 Hs.591003 8

protein binding

membrane

integral to membrane

 
224326_s_at -0.469 6.486 -2.410 2.903e-02 0.322 -3.637 PCGF6 polycomb group ring finger 6 10 -105052542 AB047006 10q24.33 Hs.719328 12

transcription factor activity

protein binding

nucleus

zinc ion binding

negative regulation of transcription

PcG protein complex

metal ion binding

 
207456_at 0.240 3.610 2.410 2.904e-02 0.322 -3.637 HNF4G hepatocyte nuclear factor 4, gamma 8 76614757 NM_004133 8q21.11 Hs.241529 8

transcription factor activity

steroid hormone receptor activity

steroid binding

nucleus

nucleolus

cytoplasm

regulation of transcription from RNA polymerase II promoter

zinc ion binding

transcription activator activity

sequence-specific DNA binding

metal ion binding

Maturity onset diabetes of the young

243026_x_at -0.249 7.068 -2.410 2.907e-02 0.322 -3.638 XIAP X-linked inhibitor of apoptosis X 122821728 BE380045 Xq25 Hs.356076 170

protein binding

intracellular

cytoplasm

cytosol

cytosol

apoptosis

anti-apoptosis

zinc ion binding

ligase activity

modification-dependent protein catabolic process

peptidase inhibitor activity

caspase inhibitor activity

metal ion binding

Ubiquitin mediated proteolysis

Apoptosis

Focal adhesion

Pathways in cancer

Small cell lung cancer

219338_s_at 0.344 3.815 2.409 2.910e-02 0.323 -3.639 LRRC49 leucine rich repeat containing 49 15 68972040 NM_017691 15q23 Hs.12692 7

protein binding

cytoplasm

cytoskeleton

microtubule

 
208244_at 0.245 3.691 2.409 2.910e-02 0.323 -3.639 BMP3 bone morphogenetic protein 3 4 82171142 NM_001201 4q21 Hs.387411 17

ossification

cytokine activity

extracellular region

extracellular space

cell-cell signaling

multicellular organismal development

growth factor activity

cell differentiation

positive regulation of transcription from RNA polymerase II promoter

cartilage development

 
202277_at -0.300 7.329 -2.409 2.912e-02 0.323 -3.639 SPTLC1 serine palmitoyltransferase, long chain base subunit 1 9 -93881166, -93833247 AL568804 9q22.2 Hs.90458 22

serine C-palmitoyltransferase activity

protein binding

endoplasmic reticulum

acyltransferase activity

biosynthetic process

membrane

integral to membrane

transferase activity, transferring nitrogenous groups

serine C-palmitoyltransferase complex

sphingolipid biosynthetic process

pyridoxal phosphate binding

Sphingolipid metabolism

Metabolic pathways

201774_s_at -0.498 5.243 -2.409 2.912e-02 0.323 -3.639 NCAPD2 non-SMC condensin I complex, subunit D2 12 6473558 AK022511 12p13.3 Hs.5719 14

nuclear chromosome

condensin core heterodimer

nucleus

cytoplasm

cytoplasm

cell cycle

mitosis

mitotic chromosome condensation

mitotic chromosome condensation

histone binding

histone binding

cell division

 
1557057_a_at 0.226 1.972 2.408 2.916e-02 0.323 -3.641 C5orf47 chromosome 5 open reading frame 47 5 173348767 AL039665 5q35.2 Hs.131469 1    
233082_at 0.497 4.387 2.408 2.917e-02 0.323 -3.641 ZNF630 zinc finger protein 630 X -47802510 AK000580 Xp11.3-p11.1 Hs.650883 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
212606_at -0.356 6.864 -2.408 2.917e-02 0.323 -3.641 WDFY3 WD repeat and FYVE domain containing 3 4 -85949008, -85809722, -85809722 AL536319 4q21.23 Hs.480116 10

binding

zinc ion binding

membrane

metal ion binding

 
212774_at -0.660 10.201 -2.408 2.918e-02 0.323 -3.641 ZNF238 zinc finger protein 238 1 242281183, 242283204 AJ223321 1q44-qter Hs.69997 11

negative regulation of transcription from RNA polymerase II promoter

nuclear chromosome

transcription factor activity

protein binding

intracellular

nucleus

transport

zinc ion binding

regulation of transcription

metal ion binding

 
209492_x_at 0.344 11.523 2.407 2.922e-02 0.323 -3.642 ATP5I ATP synthase, H+ transporting, mitochondrial F0 complex, subunit E 4 -656224 BC003679 4p16.3 Hs.85539 14

mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)

mitochondrion

ion transport

hydrogen ion transmembrane transporter activity

ATP synthesis coupled proton transport

proton transport

membrane

ATPase activity

Oxidative phosphorylation

Metabolic pathways

209669_s_at -0.455 9.469 -2.407 2.923e-02 0.323 -3.643 SERBP1 SERPINE1 mRNA binding protein 1 1 -67646080 BC003049 1p31 Hs.719078 22

RNA binding

mRNA 3'-UTR binding

protein binding

nucleus

cytoplasm

regulation of mRNA stability

perinuclear region of cytoplasm

 
213283_s_at 0.235 5.772 2.407 2.925e-02 0.323 -3.643 SALL2 sal-like 2 (Drosophila) 14 -21059071 BG285616 14q11.1-q12 Hs.416358 Hs.719293 14

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
231514_at 0.325 6.838 2.406 2.926e-02 0.323 -3.643 C1orf94 chromosome 1 open reading frame 94 1 34405210, 34415139 AA725646 1p34.3 Hs.194610 5

protein binding

 
221280_s_at -0.411 5.421 -2.406 2.926e-02 0.323 -3.644 PARD3 par-3 partitioning defective 3 homolog (C. elegans) 10 -34440102 NM_019619 10p11.21 Hs.131489 40

protein binding

cytoplasm

plasma membrane

tight junction

tight junction

cell cortex

protein complex assembly

cell cycle

establishment or maintenance of cell polarity

activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway

axonogenesis

asymmetric cell division

cell junction

Chemokine signaling pathway

Neuroactive ligand-receptor interaction

Endocytosis

Adherens junction

Tight junction

209745_at -0.441 6.512 -2.406 2.926e-02 0.323 -3.644 COQ7 coenzyme Q7 homolog, ubiquinone (yeast) 16 18986427 AK024291 16p13.11-p12.3 Hs.157113 18

iron ion binding

nucleus

mitochondrion

ubiquinone biosynthetic process

oxidoreductase activity

protein metabolic process

Ubiquinone and other terpenoid-quinone biosynthesis

Metabolic pathways

200676_s_at -0.466 6.244 -2.406 2.928e-02 0.323 -3.644 UBE2L3 ubiquitin-conjugating enzyme E2L 3 22 20251956 NM_003347 22q11.21 Hs.108104 Hs.603229 Hs.715088 38

ubiquitin ligase complex

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

cytoplasm

ubiquitin-dependent protein catabolic process

protein ubiquitination

ligase activity

enzyme binding

regulation of protein metabolic process

Ubiquitin mediated proteolysis

Parkinson's disease

212341_at -0.235 8.520 -2.406 2.928e-02 0.323 -3.644 YIPF6 Yip1 domain family, member 6 X 67635610 AA195936 Xq12 Hs.700646 Hs.82719 10

endoplasmic reticulum

membrane

integral to membrane

 
225145_at -0.308 5.687 -2.406 2.928e-02 0.323 -3.644 NCOA5 nuclear receptor coactivator 5 20 -44123032 AB046857 20q12-q13.12 Hs.654991 8

aminoacyl-tRNA ligase activity

ATP binding

nucleus

translation

regulation of transcription

 
217980_s_at 0.279 9.327 2.406 2.928e-02 0.323 -3.644 MRPL16 mitochondrial ribosomal protein L16 11 -59330183 NM_017840 11q12-q13.1 Hs.530734 7

structural constituent of ribosome

intracellular

mitochondrion

mitochondrial large ribosomal subunit

ribosome

translation

 
228652_at 0.424 7.520 2.406 2.929e-02 0.323 -3.644 ZNF776 zinc finger protein 776 19 62949975 AI279532 19q13.43 Hs.109540 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
230737_s_at 0.262 4.357 2.406 2.929e-02 0.323 -3.644 LOC387647 patched domain containing 3 pseudogene 10 29738506 AW118878 10p11.23 Hs.719271 2    
221944_at -0.326 4.954 -2.406 2.930e-02 0.323 -3.645 FLJ42627 hypothetical LOC645644 16 2628983 N56912 16p13.3 Hs.597810 Hs.677234 1    
218159_at -0.309 7.193 -2.406 2.930e-02 0.323 -3.645 DDRGK1 DDRGK domain containing 1 20 -3119011 NM_023935 20p13 Hs.471975 4

protein binding

extracellular region

 
212431_at 0.285 7.127 2.406 2.930e-02 0.323 -3.645 HMGXB3 HMG box domain containing 3 5 149360361 D83778 5q32 Hs.719189 8

DNA binding

cellular_component

nucleus

nucleolus

biological_process

kinase activity

 
226939_at -0.634 6.972 -2.406 2.930e-02 0.323 -3.645 CPEB2 cytoplasmic polyadenylation element binding protein 2 4 14614619 AI202327 4p15.33 Hs.656937 4

nucleotide binding

RNA binding

cytoplasm

regulation of translation

 
224504_s_at -0.261 6.374 -2.405 2.933e-02 0.323 -3.646 BUD13 BUD13 homolog (S. cerevisiae) 11 -116124097 BC006350 11q23.3 Hs.437341 9    
211389_x_at 0.386 5.337 2.405 2.933e-02 0.323 -3.646 KIR3DS1 killer cell immunoglobulin-like receptor, three domains, short cytoplasmic tail, 1 19 212785 U73396 19q13.4 Hs.683173 70

receptor activity

plasma membrane

integral to plasma membrane

immune response

natural killer cell activation

MHC class I receptor activity

 
36030_at -0.491 6.822 -2.405 2.934e-02 0.323 -3.646 IFFO1 intermediate filament family orphan 1 12 -6518954, -6518954 AL080214 12p13.3 Hs.15243 7

intermediate filament

 
239512_at -0.382 5.598 -2.403 2.943e-02 0.324 -3.649 SFRS4 splicing factor, arginine/serine-rich 4 1 -29346837 R05895 1p35.3 Hs.469970 24

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

nucleus

RNA splicing

nuclear speck

RNA splicing factor activity, transesterification mechanism

 
232488_at 0.427 6.953 2.403 2.946e-02 0.324 -3.650 AGXT2L2 alanine-glyoxylate aminotransferase 2-like 2 5 -177568146 AK023470 5q35.3 Hs.248746 4

mitochondrion

transaminase activity

transferase activity

pyridoxal phosphate binding

 
1563137_at 0.355 4.394 2.403 2.946e-02 0.324 -3.650 MGAT5B mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B 17 72376392, 72380323 BC041577 17q25.2 Hs.144531 20

Golgi apparatus

membrane

integral to membrane

transferase activity, transferring glycosyl groups

alpha-1,6-mannosyl-glycoprotein 6-beta-N-acetylglucosaminyltransferase activity

metal ion binding

N-Glycan biosynthesis

Metabolic pathways

229594_at -0.370 6.287 -2.402 2.949e-02 0.324 -3.650 SPTY2D1 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) 11 -18584523 AI890299 11p15.1 Hs.268668 Hs.719399 2    
1555420_a_at -0.385 4.324 -2.402 2.951e-02 0.324 -3.651 KLF7 Kruppel-like factor 7 (ubiquitous) 2 -207653773 BC012919 2q32 Hs.471221 9

transcription factor activity

transcription coactivator activity

intracellular

nucleus

regulation of transcription from RNA polymerase II promoter

axon guidance

zinc ion binding

regulation of transcription

positive regulation of transcription, DNA-dependent

metal ion binding

dendrite morphogenesis

 
1553540_a_at -0.416 6.009 -2.402 2.951e-02 0.324 -3.651 SLC29A2 solute carrier family 29 (nucleoside transporters), member 2 11 -65886567 NM_001532 11q13 Hs.569017 26

nucleoside transmembrane transporter activity

nucleus

nucleolus

plasma membrane

integral to plasma membrane

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

transport

cell proliferation

nucleoside transport

 
1559258_a_at 0.235 2.802 2.402 2.951e-02 0.324 -3.651 CXorf61 chromosome X open reading frame 61 X -115506879 AK026566 Xq23 Hs.97892 2

plasma membrane

integral to membrane

 
202825_at 0.276 12.751 2.401 2.954e-02 0.325 -3.652 SLC25A4 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 4 186301391 NM_001151 4q35 Hs.246506 57

mitochondrial genome maintenance

transporter activity

ATP:ADP antiporter activity

protein binding

mitochondrion

mitochondrial inner membrane

mitochondrial inner membrane

integral to plasma membrane

generation of precursor metabolites and energy

transport

adenine transmembrane transporter activity

ADP transport

ATP transport

membrane

interspecies interaction between organisms

glutamate uptake during transmission of nerve impulse

Calcium signaling pathway

Parkinson's disease

Huntington's disease

203364_s_at -0.245 6.764 -2.401 2.955e-02 0.325 -3.652 KIAA0652 KIAA0652 11 46595401 NM_014741 11p11.2 Hs.127403 16    
211162_x_at 0.265 5.137 2.401 2.956e-02 0.325 -3.652 SCD stearoyl-CoA desaturase (delta-9-desaturase) 10 102096761 AF116616 10q24.31 Hs.558396 Hs.597496 43

stearoyl-CoA 9-desaturase activity

iron ion binding

endoplasmic reticulum

fatty acid biosynthetic process

membrane

integral to membrane

oxidoreductase activity

nuclear membrane

oxidation reduction

Biosynthesis of unsaturated fatty acids

PPAR signaling pathway

216561_x_at 0.287 3.357 2.401 2.956e-02 0.325 -3.653 SOX5 SRY (sex determining region Y)-box 5 12 -23576497, -23576497, -23576497 AF032454 12p12.1 Hs.657542 24

transcription factor activity

nucleus

transcription from RNA polymerase II promoter

regulation of transcription

 
224371_at 0.202 4.366 2.401 2.957e-02 0.325 -3.653 ADAMTSL1 ADAMTS-like 1 9 18464103, 18464103 AF251058 9p22.2-p22.1 Hs.522019 10

extracellular region

proteinaceous extracellular matrix

peptidase activity

metallopeptidase activity

zinc ion binding

 
226003_at -0.633 6.344 -2.401 2.958e-02 0.325 -3.653 KIF21A kinesin family member 21A 12 -37973296 AB051495 12q12 Hs.374201 25

nucleotide binding

microtubule motor activity

ATP binding

microtubule

microtubule-based movement

 
211678_s_at -0.433 8.537 -2.401 2.958e-02 0.325 -3.653 RNF114 ring finger protein 114 20 47986320 AF090934 20q13.13 Hs.144949 9

protein binding

intracellular

multicellular organismal development

spermatogenesis

zinc ion binding

cell differentiation

metal ion binding

 
203056_s_at -0.624 5.745 -2.401 2.958e-02 0.325 -3.653 PRDM2 PR domain containing 2, with ZNF domain 1 13899321, 13903936, 13903936, 13948462 AI681013 1p36.21 Hs.371823 39

transcription factor activity

intracellular

nucleus

Golgi apparatus

regulation of transcription, DNA-dependent

methyltransferase activity

zinc ion binding

transferase activity

histone-lysine N-methyltransferase activity

metal ion binding

 
207688_s_at -0.565 4.831 -2.400 2.960e-02 0.325 -3.654 INHBC inhibin, beta C 12 56114809 NM_005538 12q13.1 Hs.632722 12

transforming growth factor beta receptor binding

hormone activity

extracellular region

growth factor activity

Cytokine-cytokine receptor interaction

TGF-beta signaling pathway

177_at 0.238 3.783 2.400 2.960e-02 0.325 -3.654 PLD1 phospholipase D1, phosphatidylcholine-specific 3 -172801311 U38545 3q26 Hs.382865 84

phospholipase D activity

protein binding

cytoplasm

endosome

endoplasmic reticulum

Golgi apparatus

chemotaxis

cell communication

Ras protein signal transduction

metabolic process

membrane

lipid catabolic process

hydrolase activity

phosphoinositide binding

perinuclear region of cytoplasm

NAPE-specific phospholipase D activity

Glycerophospholipid metabolism

Ether lipid metabolism

Metabolic pathways

Endocytosis

Fc gamma R-mediated phagocytosis

GnRH signaling pathway

Pathways in cancer

Pancreatic cancer

1552296_at 0.300 3.510 2.400 2.961e-02 0.325 -3.654 BEST4 bestrophin 4 1 -45021843 NM_153274 1p33-p32.3 Hs.302513 7

molecular_function

ion channel activity

chloride channel activity

calcium ion binding

plasma membrane

ion transport

biological_process

integral to membrane

chloride ion binding

chloride channel complex

 
205856_at -0.672 5.345 -2.400 2.961e-02 0.325 -3.654 SLC14A1 solute carrier family 14 (urea transporter), member 1 (Kidd blood group) 18 41558089, 41560915 NM_015865 18q11-q12 Hs.101307 27

plasma membrane

integral to plasma membrane

transport

urea transmembrane transporter activity

urea transport

ubiquitin-ubiquitin ligase activity

 
1552789_at -0.414 4.295 -2.399 2.970e-02 0.325 -3.657 SEC62 SEC62 homolog (S. cerevisiae) 3 171167273 NM_153039 3q26.2 Hs.622596 10

receptor activity

endoplasmic reticulum

cytoskeleton

cotranslational protein targeting to membrane

protein transporter activity

protein transport

membrane

integral to membrane

intracellular protein transmembrane transport

 
212184_s_at -0.543 7.951 -2.399 2.970e-02 0.325 -3.657 MAP3K7IP2 mitogen-activated protein kinase kinase kinase 7 interacting protein 2 6 149680755 AL117407 6q25.1-q25.3 Hs.269775 39

protein binding

intracellular

cytoplasm

cytosol

cytosol

zinc ion binding

membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of I-kappaB kinase/NF-kappaB cascade

metal ion binding

MAPK signaling pathway

Toll-like receptor signaling pathway

1553169_at -0.370 4.513 -2.399 2.971e-02 0.325 -3.657 LRRN4 leucine rich repeat neuronal 4 20 -5969424 BC019612 20p12.3 Hs.149133 Hs.716060 6

protein binding

membrane

integral to membrane

 
228905_at -0.492 7.869 -2.399 2.971e-02 0.325 -3.657 PCM1 pericentriolar material 1 8 17824645 BE672700 8p22-p21.3 Hs.491148 36

pericentriolar material

protein binding

cytoplasm

cytoskeleton

nonmotile primary cilium

centriolar satellite

cilium assembly

cilium assembly

centrosome organization

 
232986_at 0.329 3.869 2.398 2.971e-02 0.325 -3.657 ZNF233 zinc finger protein 233 19 49455915 AC074331 19q13.31 Hs.466891 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
234376_at 0.287 4.981 2.398 2.972e-02 0.325 -3.657 MYCN v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian) 2 15998133 M55330 2p24.1 Hs.25960 115

chromatin

transcription factor activity

protein binding

nucleus

regulation of transcription from RNA polymerase II promoter

 
227951_s_at 0.471 5.800 2.398 2.974e-02 0.325 -3.658 FAM98C family with sequence similarity 98, member C 19 43585614 AW338561 19q13.2 Hs.355162 2    
221922_at -0.819 5.746 -2.398 2.974e-02 0.325 -3.658 GPSM2 G-protein signaling modulator 2 (AGS3-like, C. elegans) 1 109221125 AW195581 1p13.3 Hs.584901 11

GTPase activator activity

nucleus

nucleolus

cytoplasm

Golgi apparatus

cell cortex

signal transduction

G-protein coupled receptor protein signaling pathway

identical protein binding

 
217250_s_at 0.288 2.913 2.398 2.975e-02 0.325 -3.658 CHD5 chromodomain helicase DNA binding protein 5 1 -6084439 AL110281 1p36.31 Hs.522898 15

nucleotide binding

chromatin

DNA binding

chromatin binding

helicase activity

protein binding

ATP binding

nucleus

chromatin assembly or disassembly

ATP-dependent helicase activity

zinc ion binding

chromatin modification

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

regulation of transcription

metal ion binding

 
1553727_at 0.306 6.414 2.398 2.975e-02 0.325 -3.658 B4GALNT3 beta-1,4-N-acetyl-galactosaminyl transferase 3 12 439803 NM_173593 12p13.33 Hs.504416 6

Golgi apparatus

membrane

integral to membrane

transferase activity

Golgi cisterna membrane

N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase activity

 
242271_at 1.931 6.742 2.398 2.976e-02 0.325 -3.658 SLC26A9 solute carrier family 26, member 9 1 -204148801, -204148801 AI932662 1q31-q32 Hs.164073 8

transporter activity

transport

chloride transport

regulation of pH

secondary active sulfate transmembrane transporter activity

sulfate transport

bicarbonate transmembrane transporter activity

anion:anion antiporter activity

bicarbonate transport

membrane

integral to membrane

apical plasma membrane

 
203870_at 0.501 7.329 2.398 2.976e-02 0.325 -3.659 USP46 ubiquitin specific peptidase 46 4 -53151885, -53151885 BE856374 4q12 Hs.7966 10

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

protein binding

ubiquitin-dependent protein catabolic process

behavior

peptidase activity

cysteine-type peptidase activity

protein deubiquitination

regulation of synaptic transmission, GABAergic

 
207431_s_at -0.525 6.882 -2.398 2.977e-02 0.325 -3.659 DEGS1 degenerative spermatocyte homolog 1, lipid desaturase (Drosophila) 1 222437550 NM_003676 1q42.11 Hs.299878 5

protein binding

membrane fraction

endoplasmic reticulum

integral to plasma membrane

unsaturated fatty acid biosynthetic process

electron carrier activity

membrane

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

oxidation reduction

Sphingolipid metabolism

Metabolic pathways

235195_at -0.625 5.787 -2.397 2.978e-02 0.325 -3.659 FBXW2 F-box and WD repeat domain containing 2 9 -122559074 BG109988 9q34 Hs.494985 12

ubiquitin-protein ligase activity

protein binding

cytoplasm

protein modification process

proteolysis

modification-dependent protein catabolic process

 
203826_s_at 0.307 6.287 2.397 2.978e-02 0.325 -3.659 PITPNM1 phosphatidylinositol transfer protein, membrane-associated 1 11 -67015815 NM_004910 11q13 Hs.372295 17

calcium ion binding

intracellular

membrane fraction

cytoplasm

endoplasmic reticulum

Golgi apparatus

lipid metabolic process

brain development

phototransduction

phosphatidylinositol transporter activity

monolayer-surrounded lipid storage body

protein transport

membrane

 
59999_at -0.340 7.583 -2.397 2.978e-02 0.325 -3.659 HIF1AN hypoxia inducible factor 1, alpha subunit inhibitor 10 102285630 W37897 10q24 Hs.500788 30

peptide-aspartate beta-dioxygenase activity

iron ion binding

protein binding

nucleus

oxidoreductase activity

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

regulation of transcription

metal ion binding

oxidation reduction

 
207089_at -1.281 6.766 -2.397 2.982e-02 0.325 -3.660 NRAP nebulin-related anchoring protein 10 -115338572 AF005213 10q24-q26 Hs.268788 14

actin binding

actin binding

protein binding

fascia adherens

muscle tendon junction

biological_process

zinc ion binding

metal ion binding

muscle alpha-actinin binding

 
223940_x_at -0.767 8.680 -2.397 2.982e-02 0.325 -3.660 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 11 65021808 AF132202 11q13.1 Hs.642877 Hs.714394 8    
201595_s_at -0.364 8.667 -2.396 2.983e-02 0.325 -3.661 ZC3H15 zinc finger CCCH-type containing 15 2 187059129 NM_018471 2q32.1 Hs.368598 3

nucleic acid binding

nucleus

cytoplasm

zinc ion binding

cytokine-mediated signaling pathway

metal ion binding

 
208353_x_at 0.381 10.860 2.396 2.983e-02 0.325 -3.661 ANK1 ankyrin 1, erythrocytic 8 -41629901, -41629901, -41629900 NM_020480 8p11.1 Hs.654438 Hs.667377 49

structural constituent of cytoskeleton

cytoplasm

plasma membrane

exocytosis

cytoskeleton organization

signal transduction

cytoskeletal adaptor activity

spectrin-associated cytoskeleton

basolateral plasma membrane

sarcoplasmic reticulum

enzyme binding

spectrin binding

M band

maintenance of epithelial cell apical/basal polarity

 
241221_at 0.277 4.792 2.396 2.984e-02 0.325 -3.661 SEC14L3 SEC14-like 3 (S. cerevisiae) 22 -29185216 BE644691 22q12.2 Hs.505601 6

transporter activity

intracellular

transport

lipid binding

 
222291_at -0.431 4.141 -2.396 2.987e-02 0.325 -3.662 FAM149A family with sequence similarity 149, member A 4 187302988, 187307320 AI478795 4q35.1 Hs.357025 3    
218582_at -0.522 7.441 -2.396 2.988e-02 0.325 -3.662 MARCH5 membrane-associated ring finger (C3HC4) 5 10 94040899 NM_017824 10q23.32-q23.33 Hs.573490 8

mitochondrion

mitochondrial outer membrane

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
77508_r_at 0.376 6.666 2.396 2.988e-02 0.325 -3.662 RABEP2 rabaptin, RAB GTPase binding effector protein 2 16 -28823242 AW001436 16p11.2 Hs.555978 6

GTPase activator activity

cytoplasm

early endosome

endocytosis

growth factor activity

protein transport

 
34210_at 0.437 3.347 2.396 2.988e-02 0.325 -3.662 CD52 CD52 molecule 1 26516997 N90866 1p36 Hs.276770 27

membrane fraction

plasma membrane

integral to plasma membrane

elevation of cytosolic calcium ion concentration

anchored to membrane

respiratory burst

 
212480_at -0.231 6.843 -2.395 2.989e-02 0.325 -3.662 CYTSA cytospin A 22 22996785 AB002374 22q11.23 Hs.474384 6

cell cycle

cell division

 
1555981_at 0.226 3.952 2.395 2.989e-02 0.325 -3.662 C17orf65 chromosome 17 open reading frame 65 17 -39608877 AK055685 17q21.31 Hs.656564 2    
210013_at 0.362 5.554 2.395 2.989e-02 0.325 -3.663 HPX hemopexin 11 -6408843 BC005395 11p15.5-p15.4 Hs.426485 43

positive regulation of immunoglobulin production

positive regulation of humoral immune response mediated by circulating immunoglobulin

binding

iron ion binding

extracellular region

extracellular space

transport

cellular iron ion homeostasis

heme transporter activity

heme transport

hemoglobin metabolic process

heme metabolic process

positive regulation of tyrosine phosphorylation of Stat1 protein

interspecies interaction between organisms

metal ion binding

regulation of protein metabolic process

positive regulation of response to interferon-gamma

positive regulation of interferon-gamma-mediated signaling pathway

 
203455_s_at -0.383 7.135 -2.395 2.990e-02 0.325 -3.663 SAT1 spermidine/spermine N1-acetyltransferase 1 X 23711195 NM_002970 Xp22.1 Hs.28491 46

diamine N-acetyltransferase activity

protein binding

intracellular

cytoplasm

metabolic process

acyltransferase activity

transferase activity

Arginine and proline metabolism

Metabolic pathways

226233_at -0.524 8.307 -2.395 2.991e-02 0.325 -3.663 B3GALNT2 beta-1,3-N-acetylgalactosaminyltransferase 2 1 -233677155 BG112197 1q42.3 Hs.716571 5

Golgi apparatus

protein amino acid glycosylation

galactosyltransferase activity

membrane

integral to membrane

transferase activity, transferring glycosyl groups

 
220678_at 0.257 4.642 2.395 2.991e-02 0.325 -3.663 FLJ20712 hypothetical FLJ20712 7   NM_017937 7p14.3 Hs.272195 3    
202166_s_at -0.630 9.095 -2.395 2.992e-02 0.325 -3.663 PPP1R2 protein phosphatase 1, regulatory (inhibitor) subunit 2 3 -196722511 NM_006241 3q29 Hs.535731 Hs.706920 22

protein serine/threonine phosphatase inhibitor activity

protein binding

carbohydrate metabolic process

glycogen metabolic process

generation of precursor metabolites and energy

regulation of signal transduction

regulation of phosphoprotein phosphatase activity

 
230433_at 0.255 4.393 2.395 2.993e-02 0.326 -3.664 LOC729970 similar to hCG2028352 1   BE857101 1p21.3        
204152_s_at 0.270 4.888 2.394 2.995e-02 0.326 -3.664 MFNG MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 22 -36195048 AI738965 22q12 Hs.517603 15

extracellular space

Golgi apparatus

pattern specification process

membrane

integral to membrane

transferase activity, transferring glycosyl groups

integral to Golgi membrane

O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity

Notch signaling pathway

218428_s_at 0.442 8.206 2.394 2.996e-02 0.326 -3.664 REV1 REV1 homolog (S. cerevisiae) 2 -99383369 NM_016316 2q11.1-q11.2 Hs.443077 27

magnesium ion binding

damaged DNA binding

DNA-directed DNA polymerase activity

protein binding

intracellular

nucleus

DNA replication

DNA repair

response to DNA damage stimulus

response to UV

transferase activity

deoxycytidyl transferase activity

error-prone postreplication DNA repair

 
214072_x_at 0.280 5.426 2.394 2.996e-02 0.326 -3.664 NENF neuron derived neurotrophic factor 1 210672851 AA679297 1q32.3 Hs.461787 7

extracellular region

extracellular space

growth factor activity

heme binding

positive regulation of MAPKKK cascade

metal ion binding

 
232707_at 0.379 3.685 2.394 2.996e-02 0.326 -3.665 ISX intestine-specific homeobox 22 33792129 AK025181 22q12.3 Hs.567637 2

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

sequence-specific DNA binding

 
218036_x_at -0.458 5.265 -2.394 2.997e-02 0.326 -3.665 NMD3 NMD3 homolog (S. cerevisiae) 3 162421792 NM_015938 3q26.1 Hs.598836 8

nucleus

nucleoplasm

nucleolus

cytoplasm

protein transport

 
232138_at 0.569 6.634 2.394 2.998e-02 0.326 -3.665 MBNL2 muscleblind-like 2 (Drosophila) 13 96672574 AW276914 13q32.1 Hs.657347 9

RNA binding

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
1559510_at 0.226 2.090 2.394 2.999e-02 0.326 -3.665 BHLHB9 basic helix-loop-helix domain containing, class B, 9 X 101862297, 101887562 BC040959 Xq23 Hs.4276 6

binding

nucleus

cytoplasm

 
221814_at 0.328 4.906 2.393 3.002e-02 0.326 -3.666 GPR124 G protein-coupled receptor 124 8 37773581 BF511315 8p11.23 Hs.274136 9

G-protein coupled receptor activity

G-protein coupled receptor activity

protein binding

plasma membrane

neuropeptide signaling pathway

integral to membrane

integral to membrane

 
205793_x_at 0.278 4.960 2.393 3.002e-02 0.326 -3.666 TNK1 tyrosine kinase, non-receptor, 1 17 7225088 NM_003985 17p13.1 Hs.203420 10

nucleotide binding

non-membrane spanning protein tyrosine kinase activity

signal transducer activity

protein binding

ATP binding

cytoplasm

membrane

transferase activity

protein amino acid autophosphorylation

 
206749_at 0.345 5.072 2.393 3.003e-02 0.326 -3.667 CD1B CD1b molecule 1 -156564363 NM_001764 1q22-q23 Hs.1310 38

protein binding

lysosomal membrane

endosome

plasma membrane

immune response

endosome membrane

integral to membrane

antigen processing and presentation

MHC class I protein complex

Hematopoietic cell lineage

238029_s_at 0.406 4.963 2.393 3.005e-02 0.326 -3.667 SLC16A14 solute carrier family 16, member 14 (monocarboxylic acid transporter 14) 2 -230607941 R15072 2q36.3 Hs.504317 3

plasma membrane

transport

symporter activity

integral to membrane

 
204966_at 0.316 4.693 2.393 3.006e-02 0.326 -3.667 BAI2 brain-specific angiogenesis inhibitor 2 1 -31965304 NM_001703 1p35 Hs.524138 11

plasma membrane

neuropeptide signaling pathway

integral to membrane

integral to membrane

brain-specific angiogenesis inhibitor activity

brain-specific angiogenesis inhibitor activity

 
1556464_a_at 0.216 6.195 2.393 3.006e-02 0.326 -3.667 C2orf72 chromosome 2 open reading frame 72 2 231610524 AF086098 2q37.1 Hs.526596 Hs.551993 5

protein binding

extracellular region

 
225869_s_at 0.293 4.208 2.392 3.006e-02 0.326 -3.667 UNC93B1 unc-93 homolog B1 (C. elegans) 11 -67515150 AW001274 11q13 Hs.502989 15

membrane

integral to membrane

 
212602_at -0.357 4.855 -2.392 3.007e-02 0.326 -3.668 WDFY3 WD repeat and FYVE domain containing 3 4 -85949008, -85809722, -85809722 AI806395 4q21.23 Hs.480116 10

binding

zinc ion binding

membrane

metal ion binding

 
231454_at 0.314 4.974 2.392 3.008e-02 0.326 -3.668 PLAC4 placenta-specific 4 21 -41469027 R31094 21q22.2 Hs.472492 3    
214665_s_at -0.351 9.690 -2.392 3.009e-02 0.326 -3.668 CHP calcium binding protein P22 15 39310728 AK000095 15q13.3 Hs.406234 Hs.706184 21

calcium ion binding

cytoplasm

potassium ion transport

small GTPase mediated signal transduction

potassium channel regulator activity

MAPK signaling pathway

Calcium signaling pathway

Apoptosis

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Long-term potentiation

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

1557783_at 0.261 4.767 2.392 3.009e-02 0.326 -3.668 LOC100133991 similar to hCG1995169 17 40681085, 40695340 BC031942 17q21.31 Hs.668927 2    
1558691_a_at 0.247 3.860 2.391 3.013e-02 0.326 -3.669 DOCK4 dedicator of cytokinesis 4 7 -111153399 AV691156 7q31.1 Hs.654652 16

guanyl-nucleotide exchange factor activity

protein binding

membrane

SH3 domain binding

PDZ domain binding

Rac GTPase activator activity

stereocilium

Rac GTPase binding

 
208242_at 0.377 6.346 2.391 3.014e-02 0.326 -3.670 RAX retina and anterior neural fold homeobox 18 -55085246 NM_013435 18q21.32 Hs.278957 8

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

visual perception

sequence-specific DNA binding

 
1554471_a_at -0.545 5.677 -2.391 3.014e-02 0.326 -3.670 ANKRD13C ankyrin repeat domain 13C 1 -70497272 BC028840 1p32.3-p31.3 Hs.105016 10

endoplasmic reticulum

 
203341_at -0.468 7.997 -2.391 3.015e-02 0.326 -3.670 CEBPZ CCAAT/enhancer binding protein (C/EBP), zeta 2 -37282278 NM_005760 2p22.2 Hs.135406 14

DNA binding

binding

nucleus

transcription from RNA polymerase II promoter

regulation of transcription

 
224812_at 0.341 9.887 2.391 3.015e-02 0.326 -3.670 HIBADH 3-hydroxyisobutyrate dehydrogenase 7 -27531585 AL577446 7p15.2 Hs.406758 9

phosphogluconate dehydrogenase (decarboxylating) activity

binding

mitochondrion

pentose-phosphate shunt

valine metabolic process

3-hydroxyisobutyrate dehydrogenase activity

oxidoreductase activity

NAD or NADH binding

oxidation reduction

Valine, leucine and isoleucine degradation

Metabolic pathways

204053_x_at -0.422 6.591 -2.391 3.015e-02 0.326 -3.670 PTEN phosphatase and tensin homolog 10 89613174 U96180 10q23.3 Hs.500466 557

regulation of cyclin-dependent protein kinase activity

magnesium ion binding

angiogenesis

phosphatidylinositol-3-phosphatase activity

protein serine/threonine phosphatase activity

protein tyrosine phosphatase activity

platelet-derived growth factor receptor binding

protein binding

nucleus

cytoplasm

cytoplasm

cytosol

protein amino acid dephosphorylation

protein amino acid dephosphorylation

lipid metabolic process

induction of apoptosis

central nervous system development

protein tyrosine/serine/threonine phosphatase activity

negative regulation of cell proliferation

lipid binding

phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity

phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity

hydrolase activity

PDZ domain binding

negative regulation of cell migration

neuron projection development

regulation of protein stability

negative regulation of apoptosis

endothelial cell migration

inositol phosphate dephosphorylation

phosphoinositide dephosphorylation

platelet-derived growth factor receptor signaling pathway

cardiac muscle tissue development

inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity

phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity

negative regulation of focal adhesion formation

negative regulation of protein kinase B signaling cascade

Inositol phosphate metabolism

Phosphatidylinositol signaling system

p53 signaling pathway

Focal adhesion

Tight junction

Pathways in cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Small cell lung cancer

224446_at -0.381 7.126 -2.391 3.016e-02 0.326 -3.670 LLPH LLP homolog, long-term synaptic facilitation (Aplysia) 12 -64803116 BC006002 12q14.3 Hs.504820 4    
1553412_at 0.310 5.456 2.391 3.017e-02 0.326 -3.671 AGBL4 ATP/GTP binding protein-like 4 1 -48771113 NM_032785 1p33 Hs.551844 Hs.679809 Hs.716221 4

metallocarboxypeptidase activity

cytoplasm

proteolysis

peptidase activity

metallopeptidase activity

zinc ion binding

metal ion binding

 
221235_s_at -0.256 6.044 -2.390 3.018e-02 0.326 -3.671 LOC644617 hypothetical LOC644617 2   NM_030825 2q12.1 Hs.592796 1    
208374_s_at -0.357 7.858 -2.390 3.020e-02 0.326 -3.671 CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 1 112963597 NM_006135 1p13.2 Hs.514934 21

actin binding

protein binding

protein complex assembly

cell motion

F-actin capping protein complex

actin cytoskeleton organization

actin filament capping

 
206167_s_at -0.835 7.674 -2.390 3.020e-02 0.326 -3.672 ARHGAP6 Rho GTPase activating protein 6 X -11071437, -11065583, -11065583 NM_001174 Xp22.3 Hs.435291 6

SH3/SH2 adaptor activity

GTPase activator activity

Rho GTPase activator activity

intracellular

cytoplasm

actin filament

actin filament organization

signal transduction

Rho protein signal transduction

SH3 domain binding

actin filament polymerization

regulation of GTPase activity

negative regulation of stress fiber formation

negative regulation of focal adhesion formation

 
221482_s_at -0.438 11.038 -2.390 3.021e-02 0.326 -3.672 ARPP19 cAMP-regulated phosphoprotein, 19kDa 15 -50626723 BC003418 15q21.2 Hs.512908 10

receptor binding

cytoplasm

potassium channel regulator activity

positive regulation of gluconeogenesis

positive regulation of glucose import

 
215461_at 0.262 5.758 2.389 3.025e-02 0.327 -3.673 ZNRF4 zinc and ring finger 4 19 5406425 AI807507 19p13.3 Hs.126496 4

protein binding

zinc ion binding

membrane

integral to membrane

metal ion binding

 
38340_at 0.312 6.264 2.389 3.029e-02 0.327 -3.674 HIP1R huntingtin interacting protein 1 related 12 121885991 AB014555 12q24 Hs.524815 Hs.714965 19

actin binding

protein binding

cytoplasm

coated pit

receptor-mediated endocytosis

biological_process

membrane

clathrin coated vesicle membrane

cytoplasmic vesicle

phosphoinositide binding

perinuclear region of cytoplasm

 
1569522_at 0.338 8.193 2.389 3.029e-02 0.327 -3.674 LOC100132767 hypothetical LOC100132767 16   BC015443 16p11.2        
200984_s_at -0.364 10.115 -2.388 3.030e-02 0.327 -3.675 CD59 CD59 molecule, complement regulatory protein 11 -33681131, -33681131, -33681131 X16447 11p13 Hs.278573 Hs.709466 Hs.710641 107

protein binding

extracellular region

membrane fraction

plasma membrane

cell surface receptor linked signal transduction

blood coagulation

anchored to membrane

anchored to external side of plasma membrane

Complement and coagulation cascades

Hematopoietic cell lineage

204166_at 0.285 5.107 2.388 3.031e-02 0.327 -3.675 SBNO2 strawberry notch homolog 2 (Drosophila) 19 -1058632, -1058632 NM_014963 19p13.3 Hs.408708 5

macrophage activation during immune response

cellular_component

transcription repressor activity

regulation of transcription

negative regulation of transcription, DNA-dependent

regulation of inflammatory response

 
232893_at 0.248 2.700 2.388 3.032e-02 0.327 -3.675 LMBRD2 LMBR1 domain containing 2 5 -36139170 AL137370 5p13.2 Hs.294103 2

membrane

integral to membrane

 
1553993_s_at -0.592 7.766 -2.387 3.041e-02 0.327 -3.678 MED25 mediator complex subunit 25 19 55013357 BC024312 19q13.3 Hs.656639 13

nucleus

regulation of transcription

 
208858_s_at -0.739 7.811 -2.387 3.041e-02 0.327 -3.678 ESYT1 extended synaptotagmin-like protein 1 12 54808320 BC004998 12q13.2 Hs.632729 10

membrane

integral to membrane

 
214372_x_at 0.259 7.265 2.387 3.041e-02 0.327 -3.678 ERN2 endoplasmic reticulum to nucleus signaling 2 16 -23609126 AI732416 16p12.2 Hs.592041 7

nucleotide binding

magnesium ion binding

endonuclease activity

protein serine/threonine kinase activity

ATP binding

endoplasmic reticulum

mRNA processing

protein amino acid phosphorylation

apoptosis

induction of apoptosis

response to stress

cell cycle arrest

membrane

integral to membrane

rRNA catabolic process

negative regulation of transcription

transferase activity

hydrolase activity

endoribonuclease activity, producing 5'-phosphomonoesters

 
227002_at 0.400 8.112 2.386 3.042e-02 0.327 -3.678 FAM78A family with sequence similarity 78, member A 9 -133123285 BF515132 9q34 Hs.143878 Hs.704076 5    
244128_x_at 0.340 5.599 2.386 3.043e-02 0.327 -3.678 GLIS1 GLIS family zinc finger 1 1 -53744493 AA872588 1p32.3 Hs.306691 6

negative regulation of transcription from RNA polymerase II promoter

DNA binding

specific RNA polymerase II transcription factor activity

intracellular

nucleus

nucleolus

cytoplasm

zinc ion binding

positive regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

 
216762_at 0.290 4.361 2.386 3.043e-02 0.327 -3.678 KANK1 KN motif and ankyrin repeat domains 1 9 494702, 696895 AK025097 9p24.3 Hs.306764 14

cytoplasm

 
209111_at 0.357 8.953 2.386 3.044e-02 0.327 -3.678 RNF5 ring finger protein 5 6 32254139, 3553349, 3361128 BC004155 6p21.3 Hs.718462 21

protein binding

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
228339_at 0.379 7.373 2.386 3.044e-02 0.327 -3.679 ECSCR endothelial cell-specific chemotaxis regulator 5 -138812143 AA181256 5q31.2 Hs.483538 Hs.570903 5

angiogenesis

plasma membrane

chemotaxis

multicellular organismal development

integral to membrane

cell differentiation

 
222908_at 0.323 4.190 2.386 3.046e-02 0.328 -3.679 FAM38B family with sequence similarity 38, member B 18 -10660859 AW269818 18p11.22 Hs.585839 1

membrane

integral to membrane

 
234003_at 0.297 4.419 2.386 3.046e-02 0.328 -3.679 ENOX2 ecto-NOX disulfide-thiol exchanger 2 X -129585037 AL133115 Xq25-q26.2 Hs.171458 22

nucleotide binding

nucleic acid binding

copper ion binding

extracellular region

extracellular space

nucleus

cytoplasm

cytosol

cytoskeleton

plasma membrane

transport

ultradian rhythm

external side of plasma membrane

protein disulfide oxidoreductase activity

cell growth

oxidoreductase activity

electron transport chain

regulation of growth

 
218721_s_at -0.350 6.530 -2.386 3.047e-02 0.328 -3.679 C1orf27 chromosome 1 open reading frame 27 1 184611623 NM_017847 1q25 Hs.371210 6

zinc ion binding

membrane

integral to membrane

oxidoreductase activity

 
210266_s_at -0.360 7.708 -2.385 3.049e-02 0.328 -3.680 TRIM33 tripartite motif-containing 33 1 -114736921 AF220137 1p13.1 Hs.26837 12

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

negative regulation of transcription

protein ubiquitination

ligase activity

regulation of transforming growth factor beta receptor signaling pathway

modification-dependent protein catabolic process

negative regulation of BMP signaling pathway

metal ion binding

co-SMAD binding

R-SMAD binding

 
200620_at -0.236 9.852 -2.385 3.051e-02 0.328 -3.680 TMEM59 transmembrane protein 59 1 -54269936 NM_004872 1p36-p31 Hs.523262 10

membrane

integral to membrane

 
215222_x_at -0.388 7.097 -2.385 3.052e-02 0.328 -3.681 MACF1 microtubule-actin crosslinking factor 1 1 39319704, 39569396 AK023406 1p32-p31 Hs.580782 25

calcium ion binding

calcium ion binding

protein binding

cytoplasm

cytoplasm

cytoskeleton

cytoskeleton

cell cycle arrest

microtubule binding

biological_process

actin filament binding

 
223581_at 0.294 5.041 2.385 3.052e-02 0.328 -3.681 ZNF577 zinc finger protein 577 19 -57066361, -57066361, -57050868 BC004992 19q13.41 Hs.148322 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
225016_at -0.752 4.994 -2.385 3.052e-02 0.328 -3.681 APCDD1 adenomatosis polyposis coli down-regulated 1 18 10444624 N48299 18p11.22 Hs.293274 4

membrane

integral to membrane

 
207121_s_at -0.577 9.189 -2.385 3.052e-02 0.328 -3.681 MAPK6 mitogen-activated protein kinase 6 15 50098702 NM_002748 15q21 Hs.411847 16

nucleotide binding

protein serine/threonine kinase activity

MAP kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

cell cycle

signal transduction

transferase activity

 
218449_at -0.361 8.054 -2.385 3.053e-02 0.328 -3.681 UFSP2 UFM1-specific peptidase 2 4 -186557687 NM_018359 4q35.1 Hs.508154 Hs.713548 8

peptidase activity

cysteine-type peptidase activity

thiolester hydrolase activity

modification-dependent protein catabolic process

 
208620_at -0.431 9.978 -2.384 3.055e-02 0.328 -3.682 PCBP1 poly(rC) binding protein 1 2 70168088 U24223 2p13-p12 Hs.2853 42

nuclear mRNA splicing, via spliceosome

DNA binding

single-stranded DNA binding

RNA binding

protein binding

nucleus

cytoplasm

mRNA metabolic process

ribonucleoprotein complex

 
227320_at 0.416 6.014 2.384 3.056e-02 0.328 -3.682 FAM101A family with sequence similarity 101, member A 12 123339662 AW264333 12q24.31 Hs.432901 3    
218756_s_at 0.552 6.561 2.384 3.056e-02 0.328 -3.682 DHRS11 dehydrogenase/reductase (SDR family) member 11 17 32022338 NM_024308 17q12 Hs.462859 5

binding

extracellular region

oxidoreductase activity

oxidation reduction

 
1553642_at 0.271 6.304 2.384 3.057e-02 0.328 -3.682 C9orf163 chromosome 9 open reading frame 163 9 138497767 NM_152571 9q34.3 Hs.212613 3

protein binding

 
223262_s_at -0.323 6.171 -2.384 3.059e-02 0.328 -3.683 FGFR1OP2 FGFR1 oncogene partner 2 12 26982582 AI738434 12p11.23 Hs.591162 5

cytoplasm

 
206863_x_at 0.375 4.521 2.384 3.060e-02 0.328 -3.683 HRK harakiri, BCL2 interacting protein (contains only BH3 domain) 12 -115783409 U76376 12q24.22 Hs.87247 18

protein binding

induction of apoptosis

negative regulation of survival gene product expression

regulation of apoptosis

 
208006_at 0.384 4.265 2.383 3.060e-02 0.328 -3.683 FOXI1 forkhead box I1 5 169465494 NM_012188 5q34 Hs.87236 9

transcription factor activity

nucleus

multicellular organismal development

DNA bending activity

transcription activator activity

inner ear morphogenesis

sequence-specific DNA binding

positive regulation of transcription, DNA-dependent

 
226101_at -0.597 5.924 -2.383 3.061e-02 0.328 -3.683 PRKCE protein kinase C, epsilon 2 45732546 AI093546 2p21 Hs.580351 178

nucleotide binding

protein kinase C activity

signal transducer activity

ATP binding

membrane fraction

protein amino acid phosphorylation

induction of apoptosis

intracellular signaling cascade

zinc ion binding

transferase activity

enzyme binding

diacylglycerol binding

metal ion binding

Vascular smooth muscle contraction

Tight junction

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Type II diabetes mellitus

1564193_at 0.251 2.896 2.383 3.062e-02 0.328 -3.684 FLJ39061 hypothetical protein FLJ39061 2   AK096380 2q33.1 Hs.686898 4    
218973_at -0.378 6.563 -2.383 3.062e-02 0.328 -3.684 EFTUD1 elongation factor Tu GTP binding domain containing 1 15 -80209615 NM_024580 15q25.2 Hs.459114 4

nucleotide binding

translation elongation factor activity

GTPase activity

GTP binding

translation

 
202876_s_at 0.318 6.644 2.383 3.063e-02 0.328 -3.684 PBX2 pre-B-cell leukemia homeobox 2 6 -32260487, -3559697, -3367476 NM_002586 6p21.3 Hs.509545 Hs.718462 18

chromatin binding

transcription factor activity

protein binding

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

proximal/distal pattern formation

embryonic limb morphogenesis

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

 
221730_at -0.610 5.878 -2.383 3.064e-02 0.328 -3.684 COL5A2 collagen, type V, alpha 2 2 -189604885 NM_000393 2q14-q32 Hs.445827 29

molecular_function

extracellular matrix structural constituent

extracellular region

collagen

collagen type V

collagen fibril organization

collagen fibril organization

skin development

skin development

eye morphogenesis

Focal adhesion

ECM-receptor interaction

1556061_at -0.569 5.164 -2.383 3.064e-02 0.328 -3.684 RPP30 ribonuclease P/MRP 30kDa subunit 10 92621688, 92621688 AI760272 10q23.31 Hs.139120 16

ribonuclease P activity

ribonuclease activity

protein binding

nucleus

nucleolar ribonuclease P complex

nucleolus

tRNA processing

hydrolase activity

 
235832_at 0.247 5.050 2.382 3.071e-02 0.328 -3.686 NKX6-2 NK6 homeobox 2 10 -134448309 BF509028 10q26 Hs.134013 2

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

negative regulation of cell fate commitment

positive regulation of cell fate commitment

regulation of transcription from RNA polymerase II promoter involved in spinal cord motor neuron fate specification

regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification

myelination in the central nervous system

cell differentiation

endocrine pancreas development

sequence-specific DNA binding

negative regulation of glial cell differentiation

positive regulation of glial cell differentiation

oligodendrocyte differentiation

neuromuscular process controlling balance

 
201232_s_at -0.425 8.368 -2.381 3.073e-02 0.329 -3.687 PSMD13 proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 11 226807 NM_002817 11p15.5 Hs.134688 41

proteasome complex

protein binding

cytosol

proteasome regulatory particle

meiosis I

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

232588_at 0.322 4.360 2.381 3.076e-02 0.329 -3.688 STAG1 stromal antigen 1 3 -137538688 AI038943 3q22.3 Hs.412586 11

chromatin

protein binding

nucleus

cell cycle

chromosome segregation

mitosis

cell division

Cell cycle

215393_s_at 0.292 4.343 2.381 3.077e-02 0.329 -3.688 COBLL1 COBL-like 1 2 -165249503 AK002054 2q24.3 Hs.470457 9    
212667_at -0.498 9.178 -2.380 3.078e-02 0.329 -3.688 SPARC secreted protein, acidic, cysteine-rich (osteonectin) 5 -151021201 AL575922 5q31.3-q32 Hs.111779 Hs.708558 115

ossification

copper ion binding

calcium ion binding

collagen binding

extracellular region

extracellular region

basement membrane

signal transduction

platelet alpha granule lumen

regulation of cell proliferation

extracellular matrix binding

 
1565660_at 0.344 5.656 2.380 3.079e-02 0.329 -3.689 FUT6 fucosyltransferase 6 (alpha (1,3) fucosyltransferase) 19 -5781636 BC040472 19p13.3 Hs.631846 Hs.705615 19

Golgi apparatus

protein amino acid glycosylation

membrane

integral to membrane

transferase activity, transferring glycosyl groups

3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase activity

L-fucose catabolic process

alpha(1,3)-fucosyltransferase activity

Glycosphingolipid biosynthesis - lacto and neolacto series

Metabolic pathways

241827_at 0.406 6.408 2.380 3.081e-02 0.329 -3.689 ZNF615 zinc finger protein 615 19 -57186399 AL577866 19q13.41 Hs.368355 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
202808_at -0.429 7.423 -2.379 3.084e-02 0.329 -3.690 C10orf26 chromosome 10 open reading frame 26 10 104493716, 104525877 AK000161 10q24.32 Hs.500897 Hs.693257 Hs.707763 9

membrane

integral to membrane

 
212623_at -0.445 6.618 -2.379 3.085e-02 0.329 -3.690 TMEM41B transmembrane protein 41B 11 -9258777 AU153138 11p15.4 Hs.594563 4

membrane

integral to membrane

 
231867_at 1.306 3.793 2.379 3.086e-02 0.329 -3.691 ODZ2 odz, odd Oz/ten-m homolog 2 (Drosophila) 5 166644420 AB032953 5q34 Hs.654631 Hs.715483 9

signal transduction

membrane

integral to membrane

 
222879_s_at 0.284 4.820 2.379 3.087e-02 0.329 -3.691 POLH polymerase (DNA directed), eta 6 43651855 AF158185 6p21.1 Hs.655467 65

magnesium ion binding

DNA synthesis during DNA repair

damaged DNA binding

DNA-directed DNA polymerase activity

nucleus

nucleoplasm

nucleolus

cytoplasm

regulation of DNA repair

pyrimidine dimer repair

postreplication repair

response to DNA damage stimulus

response to UV-C

transferase activity

nucleotidyltransferase activity

 
1570344_at 0.289 4.362 2.379 3.088e-02 0.329 -3.691 LRPPRC leucine-rich PPR-motif containing 2 -43966866 BG772870 2p21 Hs.368084 15

condensed nuclear chromosome

DNA binding

single-stranded DNA binding

RNA binding

protein binding

nucleus

nuclear inner membrane

nuclear outer membrane

nucleoplasm

cytoplasm

mitochondrion

cytoskeleton

transport

microtubule binding

membrane

mitochondrial nucleoid

regulation of transcription

mitochondrion transport along microtubule

perinuclear region of cytoplasm

beta-tubulin binding

actin filament binding

mRNA transport

 
230102_at -0.557 3.959 -2.379 3.088e-02 0.329 -3.691 ETV5 ets variant 5 3 -187246799 AW206458 3q28 Hs.43697 21

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

sequence-specific DNA binding

 
236846_at 0.543 3.810 2.378 3.090e-02 0.329 -3.692 LOC284757 hypothetical protein LOC284757 20   AI808031 20q13.33 Hs.656468 1    
236656_s_at -0.887 6.679 -2.378 3.091e-02 0.329 -3.692 LOC100130506 hypothetical protein LOC100130506 2   AW014647          
229877_at 0.228 2.554 2.378 3.094e-02 0.330 -3.693 NEO1 neogenin homolog 1 (chicken) 15 71131927 BF058828 15q22.3-q23 Hs.388613 17

protein binding

plasma membrane

integral to plasma membrane

cell adhesion

Cell adhesion molecules (CAMs)

231919_at -0.382 6.052 -2.378 3.094e-02 0.330 -3.693 DBT dihydrolipoamide branched chain transacylase E2 1 -100425065 AK024946 1p31 Hs.709187 34

protein binding

mitochondrion

mitochondrial alpha-ketoglutarate dehydrogenase complex

metabolic process

acyltransferase activity

transferase activity

lipoic acid binding

mitochondrial nucleoid

dihydrolipoyllysine-residue (2-methylpropanoyl)transferase activity

acyl-CoA biosynthetic process

cofactor binding

Valine, leucine and isoleucine degradation

Metabolic pathways

209694_at -0.301 9.325 -2.377 3.097e-02 0.330 -3.694 PTS 6-pyruvoyltetrahydropterin synthase 11 111602297 M97655 11q22.3-q23.3 Hs.503860 42

6-pyruvoyltetrahydropterin synthase activity

cytoplasm

mitochondrion

cellular amino acid metabolic process

tetrahydrobiopterin biosynthetic process

central nervous system development

zinc ion binding

lyase activity

protein homodimerization activity

metal ion binding

Folate biosynthesis

Metabolic pathways

227674_at 0.386 5.421 2.377 3.097e-02 0.330 -3.694 ZNF585A zinc finger protein 585A 19 -42332840, -42332840 AA910852 19q13.12 Hs.390568 Hs.659236 3

nucleic acid binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
242345_at -0.726 3.395 -2.377 3.098e-02 0.330 -3.694 COL28A1 collagen, type XXVIII, alpha 1 7 -7364768 AI217375 7p21.3 Hs.491104 3

serine-type endopeptidase inhibitor activity

protein binding

extracellular region

basement membrane

cell adhesion

peptidase inhibitor activity

 
225217_s_at -0.438 5.673 -2.377 3.099e-02 0.330 -3.694 BRPF3 bromodomain and PHD finger containing, 3 6 36272527 AB033112 6p21 Hs.520096 6

histone acetyltransferase complex

protein binding

zinc ion binding

histone H3 acetylation

metal ion binding

 
202187_s_at -0.450 8.106 -2.377 3.100e-02 0.330 -3.694 PPP2R5A protein phosphatase 2, regulatory subunit B', alpha isoform 1 210525501 NM_006243 1q32.2-q32.3 Hs.716433 41

protein phosphatase type 2A complex

chromosome, centromeric region

protein binding

nucleus

cytoplasm

signal transduction

protein phosphatase type 2A regulator activity

Wnt signaling pathway

234129_at -0.249 3.328 -2.376 3.107e-02 0.330 -3.696 ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 11 119713155 AL137456 11q23.3 Hs.24598 26

G-protein-coupled receptor binding

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

GTPase activator activity

protein binding

intracellular

cytoplasm

G-protein coupled receptor protein signaling pathway

intracellular signaling cascade

membrane

regulation of Rho protein signal transduction

Vascular smooth muscle contraction

Axon guidance

Regulation of actin cytoskeleton

220228_at -0.276 2.809 -2.376 3.107e-02 0.330 -3.697 AP4E1 adaptor-related protein complex 4, epsilon 1 subunit 15 48988237 AB030653 15q21.2 Hs.413366 6

structural molecule activity

protein binding

Golgi apparatus

intracellular protein transport

vesicle-mediated transport

membrane coat

COPI vesicle coat

Lysosome

207974_s_at -0.312 10.662 -2.375 3.109e-02 0.331 -3.697 SKP1 S-phase kinase-associated protein 1 5 -133519980 NM_006930 5q31 Hs.171626 Hs.710433 63

protein binding

nucleoplasm

cytosol

ubiquitin-dependent protein catabolic process

SCF ubiquitin ligase complex

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

Wnt signaling pathway

TGF-beta signaling pathway

215245_x_at -0.438 6.486 -2.375 3.110e-02 0.331 -3.697 FMR1 fragile X mental retardation 1 X 146801200 AA830884 Xq27.3 Hs.103183 211

mRNA binding

protein binding

soluble fraction

nucleus

nucleoplasm

nucleolus

cytoplasm

transport

polysomal ribosome

mRNA transport

 
206698_at -0.707 6.422 -2.375 3.112e-02 0.331 -3.698 XK X-linked Kx blood group (McLeod syndrome) X 37430051 NM_021083 Xp21.1 Hs.78919 24

transporter activity

protein binding

transport

amino acid transport

membrane

integral to membrane

 
212229_s_at -0.481 8.773 -2.374 3.115e-02 0.331 -3.699 FBXO21 F-box protein 21 12 -116065967 AK001699 12q24.22 Hs.719089 7

ubiquitin ligase complex

ubiquitin-protein ligase activity

ubiquitin-dependent protein catabolic process

 
209210_s_at -0.267 9.057 -2.374 3.115e-02 0.331 -3.699 FERMT2 fermitin family homolog 2 (Drosophila) 14 -52395956, -52393739 Z24725 14q22.1 Hs.509343 12

stress fiber

protein binding

cytoplasm

cytoskeleton

focal adhesion

cell cortex

cell adhesion

regulation of cell shape

actin cytoskeleton organization

cell junction

filamentous actin

 
224976_at -0.413 7.460 -2.374 3.116e-02 0.331 -3.699 NFIA nuclear factor I/A 1 61315533, 61320121, 61320567 R37335 1p31.3-p31.2 Hs.594180 Hs.710546 20

transcription factor activity

intracellular

nucleus

nucleus

cytoplasm

plasma membrane

DNA replication

regulation of transcription, DNA-dependent

transcription factor binding

viral genome replication

 
222223_s_at 0.253 3.717 2.374 3.117e-02 0.331 -3.700 IL1F5 interleukin 1 family, member 5 (delta) 2 113532685, 113533155 AF216693 2q14 Hs.516301 28

cytokine activity

interleukin-1 receptor antagonist activity

extracellular region

extracellular space

immune response

 
240633_at 0.576 7.609 2.374 3.119e-02 0.331 -3.700 DOK7 docking protein 7 4 3434830 AI743416 4p16.3 Hs.122110 Hs.701584 11

insulin receptor binding

plasma membrane

cell junction

synapse

 
228536_at -0.349 5.287 -2.374 3.120e-02 0.331 -3.700 PRMT10 protein arginine methyltransferase 10 (putative) 4 -148778982 AA574240 4q31.23 Hs.591692 4

binding

 
210981_s_at 0.311 7.074 2.374 3.120e-02 0.331 -3.700 GRK6 G protein-coupled receptor kinase 6 5 176786292, 176786292 AF040751 5q35 Hs.235116 31

nucleotide binding

G-protein coupled receptor kinase activity

signal transducer activity

ATP binding

protein amino acid phosphorylation

signal transduction

regulation of G-protein coupled receptor protein signaling pathway

membrane

transferase activity

Chemokine signaling pathway

Endocytosis

234676_s_at -0.248 3.348 -2.373 3.120e-02 0.331 -3.700 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 (putative) 21 -29166383 AK021678 21q21.3 Hs.163846 6

nucleic acid binding

protein binding

protein methyltransferase activity

transferase activity

positive regulation of cell growth

methylation

protein complex

 
213069_at -0.507 7.849 -2.373 3.123e-02 0.331 -3.701 HEG1 HEG homolog 1 (zebrafish) 3 -126167243 AI148659 3q21.2 Hs.477420 4

calcium ion binding

extracellular region

membrane

integral to membrane

 
231906_at -0.803 5.469 -2.373 3.124e-02 0.331 -3.701 HOXD8 homeobox D8 2 176702722 BF057634 2q31.1 Hs.301963 Hs.700870 14

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

determination of anterior/posterior axis, embryo

anterior/posterior pattern formation

sequence-specific DNA binding

skeletal system morphogenesis

 
226338_at -0.548 6.736 -2.372 3.127e-02 0.331 -3.702 TMEM55A transmembrane protein 55A 8 -92075674 AA604382 8q21.3 Hs.202517 4

lysosome

endosome

membrane

integral to membrane

hydrolase activity

 
91826_at 0.298 5.153 2.372 3.127e-02 0.331 -3.702 EPS8L1 EPS8-like 1 19 60279032, 60283571 AI219073 19q13.42 Hs.438862 8

molecular_function

cellular_component

cytoplasm

biological_process

 
205054_at -0.214 13.427 -2.372 3.128e-02 0.331 -3.703 NEB nebulin 2 -152050098 NM_004543 2q22 Hs.588655 32

actin binding

protein binding

cytoplasm

somatic muscle development

structural constituent of muscle

actin cytoskeleton

sarcomere

Z disc

regulation of actin filament length

 
1563860_at 0.258 3.725 2.372 3.129e-02 0.331 -3.703 LOC400965 hypothetical LOC400965 2   AK098018 2p11.2 Hs.646791 1    
218239_s_at -0.574 7.457 -2.372 3.129e-02 0.331 -3.703 GTPBP4 GTP binding protein 4 10 1024348 NM_012341 10p15-p14 Hs.215766 10

regulation of cyclin-dependent protein kinase activity

nucleotide binding

GTPase activity

protein binding

GTP binding

nucleus

nucleolus

cytoplasm

negative regulation of DNA replication

negative regulation of cell proliferation

negative regulation of cell-cell adhesion

negative regulation of cell migration

negative regulation of protein ubiquitination

negative regulation of collagen binding

ribosome biogenesis

perinuclear region of cytoplasm

protein stabilization

 
204033_at 0.418 3.779 2.372 3.130e-02 0.331 -3.703 TRIP13 thyroid hormone receptor interactor 13 5 946003 NM_004237 5p15.33 Hs.436187 10

nucleotide binding

transcription cofactor activity

ATP binding

nucleus

transcription from RNA polymerase II promoter

nucleoside-triphosphatase activity

identical protein binding

 
206516_at 0.316 4.538 2.372 3.130e-02 0.331 -3.703 AMH anti-Mullerian hormone 19 2200112 NM_000479 19p13.3 Hs.112432 75

urogenital system development

Mullerian duct regression

transforming growth factor beta receptor binding

hormone activity

extracellular region

extracellular space

cytoplasm

cell-cell signaling

gonadal mesoderm development

sex determination

sex differentiation

growth factor activity

cell differentiation

Cytokine-cytokine receptor interaction

TGF-beta signaling pathway

232946_s_at -0.386 5.008 -2.372 3.130e-02 0.331 -3.703 NADSYN1 NAD synthetase 1 11 70841864 AL512694 11q13.4 Hs.556986 9

nucleotide binding

NAD+ synthase (glutamine-hydrolyzing) activity

NAD+ synthase (glutamine-hydrolyzing) activity

protein binding

ATP binding

cytosol

nitrogen compound metabolic process

NAD biosynthetic process

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds

ligase activity

Nicotinate and nicotinamide metabolism

Metabolic pathways

214172_x_at -0.326 5.901 -2.371 3.133e-02 0.331 -3.704 RYK RYK receptor-like tyrosine kinase 3 -135358667 BG032035 3q22 Hs.654562 13

nucleotide binding

transmembrane receptor protein tyrosine kinase activity

receptor activity

ATP binding

membrane fraction

plasma membrane

integral to plasma membrane

protein amino acid phosphorylation

signal transduction

axonogenesis

transferase activity

Wnt-protein binding

Wnt receptor activity

skeletal system morphogenesis

 
219561_at -0.567 8.341 -2.371 3.134e-02 0.331 -3.704 COPZ2 coatomer protein complex, subunit zeta 2 17 -43458531 NM_016429 17q21.32 Hs.408434 8

protein binding

cytoplasm

Golgi apparatus

cis-Golgi network

intracellular protein transport

membrane

vesicle-mediated transport

membrane coat

COPI vesicle coat

cytoplasmic vesicle

 
226327_at -0.407 7.024 -2.371 3.135e-02 0.331 -3.704 ZNF507 zinc finger protein 507 19 37528353 N64593 19q13.11 Hs.205392 5

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
213782_s_at -1.156 11.420 -2.371 3.135e-02 0.331 -3.705 MYOZ2 myozenin 2 4 120276386 BF939176 4q26-q27 Hs.381047 16

protein binding

cytoplasm

biological_process

actin cytoskeleton

sarcomere

Z disc

protein phosphatase 2B binding

 
205376_at -0.976 4.882 -2.371 3.138e-02 0.332 -3.705 INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 4 -143168631 NM_003866 4q31.21 Hs.658245 9

signal transduction

phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity

hydrolase activity

phosphatidyl-inositol-4,5-bisphosphate 4-phosphatase activity

Inositol phosphate metabolism

Metabolic pathways

Phosphatidylinositol signaling system

226916_x_at -0.264 6.304 -2.370 3.139e-02 0.332 -3.706 DPP9 dipeptidyl-peptidase 9 19 -4626243 AW190431 19p13.3 Hs.515081 14

aminopeptidase activity

cytoplasm

cytosol

proteolysis

peptidase activity

serine-type peptidase activity

membrane

 
223879_s_at -0.623 7.518 -2.370 3.143e-02 0.332 -3.707 OXR1 oxidation resistance 1 8 107351648, 107739211 AF309387 8q23 Hs.148778 11

molecular_function

cellular_component

nucleolus

mitochondrion

response to oxidative stress

cell wall macromolecule catabolic process

 
202429_s_at -0.573 8.493 -2.370 3.144e-02 0.332 -3.707 PPP3CA protein phosphatase 3 (formerly 2B), catalytic subunit, alpha isoform 4 -102163609 AL353950 4q21-q24 Hs.435512 59

protein serine/threonine phosphatase activity

iron ion binding

calcium ion binding

calmodulin binding

nucleus

cytoplasm

calcineurin complex

protein amino acid dephosphorylation

zinc ion binding

hydrolase activity

MAPK signaling pathway

Calcium signaling pathway

Apoptosis

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Long-term potentiation

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

219992_at 0.408 5.794 2.369 3.145e-02 0.332 -3.707 TAC3 tachykinin 3 12 -55690050 NM_013251 12q13-q21 Hs.9730 26

receptor binding

extracellular region

extracellular space

soluble fraction

tachykinin receptor signaling pathway

neuropeptide signaling pathway

female pregnancy

 
200694_s_at -0.221 8.904 -2.369 3.145e-02 0.332 -3.707 DDX24 DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 14 -93587020 NM_020414 14q32 Hs.510328 20

nucleotide binding

RNA binding

ATP-dependent RNA helicase activity

ATP binding

cellular_component

nucleolus

cytoplasm

RNA metabolic process

hydrolase activity

 
224753_at 0.263 5.010 2.369 3.145e-02 0.332 -3.707 CDCA5 cell division cycle associated 5 11 -64601502 BE614410 11q12.1 Hs.434886 11

G1/S transition of mitotic cell cycle

chromatin binding

protein binding

nucleus

cytoplasm

cell cycle

mitosis

mitotic chromosome condensation

mitotic metaphase plate congression

cohesin complex

cell division

 
200020_at -0.452 8.553 -2.369 3.146e-02 0.332 -3.707 TARDBP TAR DNA binding protein 1 10995265 NM_007375 1p36.22 Hs.300624 Hs.635053 Hs.716809 92

nucleotide binding

transcription factor activity

RNA binding

protein binding

nucleus

nucleolus

transcription from RNA polymerase II promoter

mRNA processing

mitosis

microtubule binding

cell death

RNA splicing

regulation of transcription

 
202250_s_at -0.517 8.116 -2.369 3.146e-02 0.332 -3.708 DCAF8 DDB1 and CUL4 associated factor 8 1 -158475636, -158475636, -158452128, -158452128 NM_015726 1q22-q23 Hs.632447 10

protein binding

 
235980_at -0.451 5.834 -2.369 3.147e-02 0.332 -3.708 PIK3CA phosphoinositide-3-kinase, catalytic, alpha polypeptide 3 180349004 AA767763 3q26.3 Hs.553498 Hs.85701 259

nucleotide binding

inositol or phosphatidylinositol kinase activity

ATP binding

cytosol

phosphoinositide 3-kinase complex

glucose metabolic process

protein amino acid phosphorylation

anti-apoptosis

signal transduction

1-phosphatidylinositol-3-kinase activity

transferase activity

phosphotransferase activity, alcohol group as acceptor

lamellipodium

regulation of multicellular organism growth

protein kinase B signaling cascade

insulin receptor substrate binding

phosphoinositide phosphorylation

phosphatidylinositol-4,5-bisphosphate 3-kinase activity

phosphatidylinositol-4,5-bisphosphate 3-kinase activity

phosphoinositide-mediated signaling

Inositol phosphate metabolism

ErbB signaling pathway

Chemokine signaling pathway

Phosphatidylinositol signaling system

mTOR signaling pathway

Apoptosis

VEGF signaling pathway

Focal adhesion

Toll-like receptor signaling pathway

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Insulin signaling pathway

Type II diabetes mellitus

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Chronic myeloid leukemia

Acute myeloid leukemia

Small cell lung cancer

Non-small cell lung cancer

235033_at -0.387 5.786 -2.369 3.148e-02 0.332 -3.708 NPEPL1 aminopeptidase-like 1 20 56701267 AL577823 20q13.32 Hs.554211 Hs.654868 7

aminopeptidase activity

intracellular

proteolysis

peptidase activity

zinc ion binding

manganese ion binding

metal ion binding

 
218528_s_at -0.422 7.022 -2.368 3.151e-02 0.332 -3.709 RNF38 ring finger protein 38 9 -36326398, -36326398, -36326398 NM_022781 9p13 Hs.333503 12

protein binding

zinc ion binding

metal ion binding

 
231525_at 0.314 3.843 2.368 3.153e-02 0.332 -3.710 IQCF5 IQ motif containing F5 3 -51882777 AI377780 3p21.2 Hs.666604 1    
200609_s_at -0.303 8.777 -2.368 3.154e-02 0.332 -3.710 WDR1 WD repeat domain 1 4 -9685060 NM_017491 4p16.1 Hs.128548 Hs.713658 15

actin binding

protein binding

cytoplasm

cytoskeleton

sensory perception of sound

 
211359_s_at 0.268 2.971 2.368 3.154e-02 0.332 -3.710 OPRM1 opioid receptor, mu 1 6 154373328, 154402135, 154402135, 154402135, 154402135, 154402135, 154402135, 154402135, 154402238, 154449334 U12569 6q24-q25 Hs.2353 192

receptor activity

G-protein coupled receptor activity

mu-opioid receptor activity

endoplasmic reticulum

Golgi apparatus

plasma membrane

integral to plasma membrane

signal transduction

G-protein signaling, coupled to cyclic nucleotide second messenger

sensory perception

behavior

negative regulation of cell proliferation

Neuroactive ligand-receptor interaction

200850_s_at -0.487 8.902 -2.368 3.154e-02 0.332 -3.710 AHCYL1 adenosylhomocysteinase-like 1 1 110328830 NM_006621 1p13.2 Hs.705418 15

adenosylhomocysteinase activity

binding

endoplasmic reticulum

one-carbon metabolic process

metabolic process

hydrolase activity

Cysteine and methionine metabolism

Selenoamino acid metabolism

Metabolic pathways

204513_s_at 0.292 5.170 2.368 3.156e-02 0.332 -3.710 ELMO1 engulfment and cell motility 1 7 -36860485, -36860485, -36860485 NM_014800 7p14.2-p14.1 Hs.656638 29

protein binding

cytoplasm

cytosol

cytoskeleton

plasma membrane

phagocytosis, engulfment

apoptosis

cell motion

Rac protein signal transduction

SH3 domain binding

actin cytoskeleton organization

Chemokine signaling pathway

220552_at 0.220 2.509 2.367 3.158e-02 0.332 -3.711 TRPC5 transient receptor potential cation channel, subfamily C, member 5 X -110904197 NM_012471 Xq23 Hs.657709 27

ion channel activity

calcium ion binding

protein binding

integral to plasma membrane

ion transport

calcium ion transport

nervous system development

store-operated calcium channel activity

membrane

 
203557_s_at 0.394 7.550 2.367 3.158e-02 0.332 -3.711 PCBD1 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha 10 -72313272 NM_000281 10q22 Hs.3192 28

transcription coactivator activity

phenylalanine 4-monooxygenase activity

nucleus

cytoplasm

tetrahydrobiopterin biosynthetic process

4-alpha-hydroxytetrahydrobiopterin dehydratase activity

lyase activity

identical protein binding

regulation of protein homodimerization activity

positive regulation of transcription

protein homotetramerization

protein heterooligomerization

 
202642_s_at -0.419 5.955 -2.367 3.160e-02 0.332 -3.712 TRRAP transformation/transcription domain-associated protein 7 98314048 NM_003496 7q21.2-q22.1 Hs.203952 Hs.706926 40

PCAF complex

transcription cofactor activity

protein binding

nucleus

chromatin modification

histone deubiquitination

phosphotransferase activity, alcohol group as acceptor

STAGA complex

transcription factor TFTC complex

NuA4 histone acetyltransferase complex

histone H4 acetylation

histone H2A acetylation

regulation of transcription

 
227197_at 0.377 3.429 2.367 3.161e-02 0.332 -3.712 SGEF Src homology 3 domain-containing guanine nucleotide exchange factor 3 155321838 AI989530 3q25.2 Hs.240845 6    
203543_s_at -0.888 7.801 -2.367 3.162e-02 0.332 -3.712 KLF9 Kruppel-like factor 9 9 -72189332 NM_001206 9q13 Hs.150557 Hs.602267 19

transcription factor activity

intracellular

nucleus

regulation of transcription from RNA polymerase II promoter

embryo implantation

zinc ion binding

regulation of transcription

metal ion binding

progesterone receptor signaling pathway

 
218423_x_at -0.349 6.090 -2.367 3.162e-02 0.333 -3.712 VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) 2 -63973170 NM_016516 2p13-p14 Hs.48499 8

protein binding

protein transport

retrograde transport, endosome to Golgi

 
212242_at -0.932 10.308 -2.366 3.164e-02 0.333 -3.713 TUBA4A tubulin, alpha 4a 2 -219823244 AL565074 2q35 Hs.75318 70

nucleotide binding

GTPase activity

structural molecule activity

protein binding

GTP binding

microtubule

microtubule-based movement

protein complex

protein polymerization

Gap junction

Pathogenic Escherichia coli infection - EHEC

220955_x_at -0.400 4.974 -2.366 3.166e-02 0.333 -3.713 RAB23 RAB23, member RAS oncogene family 6 -57161540, -57161540 NM_016277 6p11 Hs.555016 11

nucleotide binding

GTP binding

plasma membrane

signal transduction

small GTPase mediated signal transduction

nervous system development

regulation of smoothened signaling pathway

protein transport

spinal cord dorsal/ventral patterning

embryonic digit morphogenesis

negative regulation of proteolysis

Hedgehog signaling pathway

201663_s_at -0.526 4.686 -2.366 3.166e-02 0.333 -3.713 SMC4 structural maintenance of chromosomes 4 3 161600123, 161601040 NM_005496 3q26.1 Hs.58992 14

nucleotide binding

condensin complex

condensin complex

protein binding

ATP binding

nucleus

chromosome

cytoplasm

cell cycle

mitotic chromosome condensation

protein heterodimerization activity

cell division

 
1559413_at -0.401 4.591 -2.366 3.168e-02 0.333 -3.714 TCP11L2 t-complex 11 (mouse)-like 2 12 105220710 AF306858 12q23.3 Hs.696047 1    
204357_s_at -0.240 6.282 -2.365 3.170e-02 0.333 -3.714 LIMK1 LIM domain kinase 1 7 73136091 NM_002314 7q11.23 Hs.647035 54

nucleotide binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

nucleus

cytoplasm

focal adhesion

protein amino acid phosphorylation

signal transduction

Rho protein signal transduction

nervous system development

zinc ion binding

transferase activity

actin cytoskeleton organization

positive regulation of axon extension

metal ion binding

protein heterodimerization activity

Axon guidance

Fc gamma R-mediated phagocytosis

Regulation of actin cytoskeleton

1554450_s_at -0.585 4.729 -2.365 3.171e-02 0.333 -3.714 MIER3 mesoderm induction early response 1, family member 3 5 -56251185 BC041348 5q11.2 Hs.657594 7

DNA binding

nucleus

regulation of transcription

 
212112_s_at -0.458 7.077 -2.365 3.171e-02 0.333 -3.715 STX12 syntaxin 12 1 27972280 AI816243 1p35-p34.1 Hs.523855 18

SNAP receptor activity

Golgi apparatus

intracellular protein transport

membrane

integral to membrane

vesicle-mediated transport

cholesterol efflux

membrane raft

phagocytic vesicle

protein stabilization

SNARE interactions in vesicular transport

232216_at 0.485 3.893 2.365 3.172e-02 0.333 -3.715 YME1L1 YME1-like 1 (S. cerevisiae) 10 -27439388 AA828049 10p14 Hs.499145 Hs.74647 9

nucleotide binding

metalloendopeptidase activity

ATP binding

mitochondrion

proteolysis

peptidase activity

zinc ion binding

membrane

nucleoside-triphosphatase activity

metal ion binding

 
1555626_a_at 0.279 5.154 2.365 3.172e-02 0.333 -3.715 SLAMF1 signaling lymphocytic activation molecule family member 1 1 -158846514 BC012602 1q22-q23 Hs.523660 36

antigen binding

transmembrane receptor activity

plasma membrane

positive regulation of cell proliferation

cell surface

integral to membrane

interspecies interaction between organisms

lymphocyte activation

 
221479_s_at -0.467 7.930 -2.365 3.172e-02 0.333 -3.715 BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 8 26296439 AF060922 8p21 Hs.131226 19

lamin binding

lamin binding

nucleus

nuclear envelope

mitochondrion

mitochondrial envelope

endoplasmic reticulum

induction of apoptosis

negative regulation of survival gene product expression

membrane

integral to membrane

protein homodimerization activity

negative regulation of apoptosis

interspecies interaction between organisms

protein heterodimerization activity

defense response to virus

 
209150_s_at -0.271 6.611 -2.365 3.173e-02 0.333 -3.715 TM9SF1 transmembrane 9 superfamily member 1 14 -23729083, -23728192 U94831 14q11.2 Hs.91586 5

membrane

integral to membrane

 
207801_s_at -0.420 8.803 -2.365 3.174e-02 0.333 -3.715 RNF10 ring finger protein 10 12 119456514 NM_014868 12q24.31 Hs.442798 10

protein binding

cytoplasm

zinc ion binding

positive regulation of transcription

metal ion binding

 
202405_at -0.434 6.053 -2.365 3.175e-02 0.333 -3.716 TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1 10 -121322967 BF432532 10q Hs.501203 33

nucleotide binding

RNA polymerase II transcription factor activity

RNA binding

lysosome

regulation of transcription from RNA polymerase II promoter

apoptosis

induction of apoptosis

defense response

 
212872_s_at -0.263 6.082 -2.365 3.175e-02 0.333 -3.716 MED20 mediator complex subunit 20 6 -41981069 AK023092 6p21.1 Hs.278434 11

DNA-directed RNA polymerase activity

protein binding

nucleus

regulation of transcription from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

mediator complex

regulation of transcription

 
238070_at -0.437 5.013 -2.364 3.176e-02 0.333 -3.716 CHD1L chromodomain helicase DNA binding protein 1-like 1 145180914 AA573217 1q12 Hs.191164 12

nucleotide binding

DNA binding

helicase activity

ATP binding

nucleus

ATP-dependent helicase activity

hydrolase activity

 
213279_at 0.372 5.807 2.364 3.176e-02 0.333 -3.716 DHRS1 dehydrogenase/reductase (SDR family) member 1 14 -23829645, -23829645 AL050217 14q12 Hs.719146 13

binding

nucleus

cytoplasm

mitochondrial inner membrane

endoplasmic reticulum

Golgi apparatus

oxidoreductase activity

oxidation reduction

 
209508_x_at -0.369 7.396 -2.364 3.178e-02 0.333 -3.717 CFLAR CASP8 and FADD-like apoptosis regulator 2 201689060, 201689134, 201691631 AF005774 2q33-q34 Hs.390736 163

cysteine-type endopeptidase activity

protein binding

proteolysis

anti-apoptosis

induction of apoptosis by extracellular signals

regulation of apoptosis

positive regulation of I-kappaB kinase/NF-kappaB cascade

interspecies interaction between organisms

Apoptosis

225242_s_at -0.801 5.742 -2.364 3.178e-02 0.333 -3.717 CCDC80 coiled-coil domain containing 80 3 -113806098 AW303375 3q13.2 Hs.477128 10

fibronectin binding

extracellular region

basement membrane

interstitial matrix

heparin binding

positive regulation of cell-substrate adhesion

extracellular matrix organization

intracellular membrane-bounded organelle

 
222484_s_at 0.728 8.550 2.364 3.181e-02 0.333 -3.717 CXCL14 chemokine (C-X-C motif) ligand 14 5 -134934267 AF144103 5q31 Hs.483444 32

extracellular region

extracellular space

Golgi apparatus

chemotaxis

immune response

signal transduction

cell-cell signaling

chemokine activity

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

226488_at 0.342 7.508 2.363 3.183e-02 0.333 -3.718 RCCD1 RCC1 domain containing 1 15 89299109 AW007826 15q26.1 Hs.655895 4    
208845_at 0.222 12.363 2.363 3.183e-02 0.333 -3.718 VDAC3 voltage-dependent anion channel 3 8 42368502 BC002456 8p11.2 Hs.655340 Hs.699301 18

nucleotide binding

behavioral fear response

protein binding

mitochondrion

mitochondrial outer membrane

mitochondrial inner membrane

anion transport

nerve-nerve synaptic transmission

learning

voltage-gated anion channel activity

adenine transport

membrane

integral to membrane

rough microsome

Calcium signaling pathway

Parkinson's disease

Huntington's disease

221776_s_at -0.490 6.451 -2.363 3.184e-02 0.333 -3.718 BRD7 bromodomain containing 7 16 -48910441 AI885109 16q12 Hs.437894 22

nucleus

cytoplasm

regulation of transcription from RNA polymerase II promoter

transcription factor binding

Wnt receptor signaling pathway

histone binding

 
213742_at -0.556 4.863 -2.363 3.184e-02 0.333 -3.718 SFRS11 splicing factor, arginine/serine-rich 11 1 70443952 AW241752 1p31 Hs.479693 13

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

nucleolus

RNA splicing

 
221227_x_at 0.295 8.085 2.363 3.187e-02 0.333 -3.719 COQ3 coenzyme Q3 homolog, methyltransferase (S. cerevisiae) 6 -99924068 NM_017421 6q16.2 Hs.713623 6

hexaprenyldihydroxybenzoate methyltransferase activity

mitochondrion

mitochondrial matrix

glycerol metabolic process

ubiquinone biosynthetic process

metabolic process

O-methyltransferase activity

2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity

transferase activity

Ubiquinone and other terpenoid-quinone biosynthesis

Metabolic pathways

203367_at -0.269 6.604 -2.363 3.187e-02 0.333 -3.719 DUSP14 dual specificity phosphatase 14 17 32924063 NM_007026 17q12 Hs.91448 5

protein tyrosine phosphatase activity

protein amino acid dephosphorylation

hydrolase activity

MAP kinase tyrosine/serine/threonine phosphatase activity

MAPK signaling pathway

223053_x_at -0.292 8.527 -2.363 3.187e-02 0.333 -3.719 SSU72 SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) 1 -1466915 AF277178 1p36.33 Hs.30026 Hs.657061 7

phosphoprotein phosphatase activity

nucleus

cytoplasm

mRNA processing

hydrolase activity

 
1560746_at -0.361 2.535 -2.362 3.189e-02 0.333 -3.719 C1orf118 chromosome 1 open reading frame 118 1   AK075118 1p31.1 Hs.632414 1    
213352_at -0.713 6.674 -2.362 3.190e-02 0.333 -3.720 TMCC1 transmembrane and coiled-coil domain family 1 3 -130849324, -130849324 AB018322 3q22.1 Hs.477547 Hs.709936 6

membrane

integral to membrane

 
206394_at -1.376 12.029 -2.362 3.190e-02 0.333 -3.720 MYBPC2 myosin binding protein C, fast type 19 55627971 NM_004533 19q13.33 Hs.85937 10

actin binding

protein binding

striated muscle thick filament

striated muscle contraction

cell adhesion

structural constituent of muscle

 
213374_x_at -0.343 8.400 -2.362 3.191e-02 0.333 -3.720 HIBCH 3-hydroxyisobutyryl-Coenzyme A hydrolase 2 -190777604 AW000964 2q32.2 Hs.656685 8

3-hydroxyisobutyryl-CoA hydrolase activity

protein binding

mitochondrion

metabolic process

branched chain family amino acid catabolic process

hydrolase activity

Valine, leucine and isoleucine degradation

beta-Alanine metabolism

Propanoate metabolism

Metabolic pathways

211784_s_at -0.373 8.572 -2.362 3.194e-02 0.334 -3.721 SFRS1 splicing factor, arginine/serine-rich 1 17 -53433278 BC006181 17q21.3-q22 Hs.68714 106

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

spliceosomal complex

cytoplasm

mRNA splice site selection

RNA splicing

nuclear speck

 
217766_s_at -0.424 6.749 -2.362 3.194e-02 0.334 -3.721 TMEM50A transmembrane protein 50A 1 25537397 NM_014313 1p36.11 Hs.523054 13

cytoplasm

endoplasmic reticulum

membrane

integral to membrane

 
233093_s_at -0.298 7.946 -2.361 3.194e-02 0.334 -3.721 BIRC6 baculoviral IAP repeat-containing 6 2 32435599 AK023788 2p22-p21 Hs.150107 14

ubiquitin-protein ligase activity

cysteine-type endopeptidase inhibitor activity

protein binding

cellular_component

intracellular

membrane fraction

apoptosis

anti-apoptosis

positive regulation of cell proliferation

ligase activity

modification-dependent protein catabolic process

peptidase inhibitor activity

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

240106_at -0.328 6.007 -2.361 3.196e-02 0.334 -3.721 GNPTAB N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits 12 -100663407 AI633523 12q23.2 Hs.46850 16

UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity

calcium ion binding

nucleus

Golgi apparatus

transcription factor binding

membrane

integral to membrane

transferase activity

cell differentiation

Lysosome

211069_s_at -0.200 9.470 -2.361 3.196e-02 0.334 -3.722 SUMO1 SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae) 2 -202779147 BC006462 2q33 Hs.596171 Hs.81424 228

protein binding

nucleus

nuclear pore

cytoplasm

DNA repair

membrane

negative regulation of transcription

negative regulation of transcription

PML body

nuclear speck

protein sumoylation

modification-dependent protein catabolic process

positive regulation of protein complex assembly

nuclear membrane

regulation of protein localization

negative regulation of transcription factor activity

 
211575_s_at -0.437 8.102 -2.361 3.198e-02 0.334 -3.722 UBE3A ubiquitin protein ligase E3A 15 -23133488, -23133488, -23133488 AF116702 15q11-q13 Hs.598862 76

ubiquitin-protein ligase activity

protein binding

intracellular

nucleus

cytosol

protein modification process

proteolysis

ubiquitin-dependent protein catabolic process

brain development

protein ubiquitination

ligase activity

acid-amino acid ligase activity

protein complex

interspecies interaction between organisms

Ubiquitin mediated proteolysis

211989_at -0.372 7.094 -2.361 3.199e-02 0.334 -3.722 SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 17 -36037505 NM_003079 17q21.2 Hs.696086 31

nuclear chromosome

DNA binding

chromatin binding

transcription coactivator activity

nucleus

nucleolus

nucleosome disassembly

regulation of transcription from RNA polymerase II promoter

N-acetyltransferase activity

SWI/SNF complex

chromatin modification

transcriptional repressor complex

negative regulation of transcription, DNA-dependent

protein N-terminus binding

 
200638_s_at -0.613 7.537 -2.360 3.201e-02 0.334 -3.723 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 8 -101999980, -101999980, -101999980, -101999980, -101999980 BC003623 8q23.1 Hs.492407 Hs.594673 169

nucleus

cytoplasm

mitochondrion

protein targeting

anti-apoptosis

signal transduction

transcription factor binding

protein domain specific binding

melanosome

Cell cycle

Neurotrophin signaling pathway

Pathogenic Escherichia coli infection - EHEC

208679_s_at -0.394 11.167 -2.360 3.202e-02 0.334 -3.723 ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa 2 218790118, 218790364 AF279893 2q36.1 Hs.529303 23

actin binding

structural constituent of cytoskeleton

protein binding

cytoplasm

Golgi apparatus

Arp2/3 protein complex

focal adhesion

cell motion

positive regulation of actin filament polymerization

cell leading edge

cell projection

Fc gamma R-mediated phagocytosis

Regulation of actin cytoskeleton

203535_at -0.464 4.123 -2.360 3.202e-02 0.334 -3.723 S100A9 S100 calcium binding protein A9 1 151596953 NM_002965 1q21 Hs.112405 102

signal transducer activity

calcium ion binding

protein binding

nucleus

nucleolus

cytoplasm

inflammatory response

cell-cell signaling

leukocyte chemotaxis

actin cytoskeleton reorganization

regulation of integrin biosynthetic process

 
242902_at 0.285 4.511 2.360 3.203e-02 0.334 -3.723 CYMP chymosin pseudogene 1 110824910 AI479358 1p13.3 Hs.532720 4    
203312_x_at -0.402 6.797 -2.360 3.203e-02 0.334 -3.723 ARF6 ADP-ribosylation factor 6 14 49429485 NM_001663 14q21.3 Hs.525330 Hs.682124 86

nucleotide binding

ruffle

liver development

GTPase activity

protein binding

GTP binding

intracellular

membrane fraction

cytoplasm

endosome

Golgi apparatus

plasma membrane

cell cortex

apoptosis

cell motion

cell adhesion

small GTPase mediated signal transduction

protein transport

vesicle-mediated transport

positive regulation of actin filament polymerization

cortical actin cytoskeleton organization

ruffle organization

regulation of Rac protein signal transduction

negative regulation of receptor-mediated endocytosis

Endocytosis

Fc gamma R-mediated phagocytosis

216210_x_at 0.266 7.426 2.360 3.203e-02 0.334 -3.724 TRIOBP TRIO and F-actin binding protein 22 36422940, 36472186, 36472186 AA046650 22q13.1 Hs.533030 20

actin binding

protein binding

nucleus

cytoplasm

actin cytoskeleton

GTP-Rho binding

actin modification

myosin II binding

barbed-end actin filament capping

 
233288_at 0.246 3.420 2.360 3.204e-02 0.334 -3.724 ATR ataxia telangiectasia and Rad3 related 3 -143650766 AU143947 3q22-q24 Hs.271791 186

DNA damage checkpoint

nucleotide binding

XY body

DNA binding

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

nucleoplasm

chromosome

DNA repair

protein amino acid phosphorylation

response to DNA damage stimulus

cell cycle

multicellular organismal development

negative regulation of DNA replication

transferase activity

manganese ion binding

MutLalpha complex binding

MutSalpha complex binding

regulation of protein binding

Cell cycle

p53 signaling pathway

238606_at -0.307 4.550 -2.360 3.206e-02 0.334 -3.724 ZNF747 zinc finger protein 747 16 -30450279 AV698217 16p11.2 Hs.592032 3

nucleic acid binding

intracellular

regulation of transcription, DNA-dependent

 
208168_s_at 0.261 3.223 2.360 3.206e-02 0.334 -3.724 CHIT1 chitinase 1 (chitotriosidase) 1 -201451829 NM_003465 1q31-q32 Hs.201688 42

polysaccharide catabolic process

chitinase activity

extracellular region

extracellular space

lysosome

carbohydrate metabolic process

chitin catabolic process

immune response

chitin binding

metabolic process

response to bacterium

cation binding

Amino sugar and nucleotide sugar metabolism

241866_at 0.646 4.232 2.359 3.208e-02 0.334 -3.725 SLC16A7 solute carrier family 16, member 7 (monocarboxylic acid transporter 2) 12 58369392 AW975728 12q13 Hs.439643 8

pyruvate secondary active transmembrane transporter activity

membrane fraction

plasma membrane

integral to plasma membrane

transport

pyruvate transport

symporter activity

secondary active monocarboxylate transmembrane transporter activity

organic anion transport

 
234485_at 0.347 4.785 2.359 3.208e-02 0.334 -3.725 LOC340947 similar to eukaryotic translation initiation factor 3 subunit 6 interacting protein 10   AL117339 10p11.1 Hs.164084      
223320_s_at -0.476 6.787 -2.359 3.208e-02 0.334 -3.725 ABCB10 ATP-binding cassette, sub-family B (MDR/TAP), member 10 1 -227718951 AF277184 1q42.13 Hs.17614 9

nucleotide binding

ATP binding

mitochondrion

mitochondrial inner membrane

transport

membrane

integral to membrane

ATPase activity

ATPase activity, coupled to transmembrane movement of substances

ATP-binding cassette (ABC) transporter complex

ABC transporters

221747_at -0.327 7.501 -2.359 3.209e-02 0.334 -3.725 TNS1 tensin 1 2 -218372756 AL046979 2q35-q36 Hs.471381 16

actin binding

protein binding

cytoplasm

cytoskeleton

focal adhesion

cell junction

 
204720_s_at 0.783 3.220 2.359 3.210e-02 0.334 -3.725 DNAJC6 DnaJ (Hsp40) homolog, subfamily C, member 6 1 65503017 AV729634 1pter-q31.3 Hs.647643 11

protein tyrosine phosphatase activity

hydrolase activity

SH3 domain binding

heat shock protein binding

Endocytosis

206946_at 0.300 4.845 2.359 3.211e-02 0.334 -3.726 HCN4 hyperpolarization activated cyclic nucleotide-gated potassium channel 4 15 -71399253 NM_005477 15q24-q25 Hs.86941 29

nucleotide binding

in utero embryonic development

intracellular cAMP activated cation channel activity

voltage-gated ion channel activity

voltage-gated potassium channel activity

sodium channel activity

protein binding

cation transport

potassium ion transport

sodium ion transport

muscle contraction

blood circulation

regulation of heart contraction

membrane

integral to membrane

cAMP binding

potassium ion binding

sodium ion binding

 
218660_at -0.288 9.017 -2.359 3.212e-02 0.334 -3.726 DYSF dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive) 2 71534260, 71534260, 71547339 NM_003494 2p13.3-p13.1 Hs.252180 59

plasma membrane

muscle contraction

integral to membrane

cytoplasmic vesicle

 
205172_x_at -0.310 8.206 -2.359 3.213e-02 0.334 -3.726 CLTB clathrin, light chain (Lcb) 5 -175752061 NM_007097 4q2-q3 5q35 Hs.484241 17

structural molecule activity

calcium ion binding

protein binding

intracellular protein transport

membrane

vesicle-mediated transport

clathrin coat of trans-Golgi network vesicle

clathrin coat of coated pit

cytoplasmic vesicle

Lysosome

Endocytosis

Huntington's disease

233516_s_at 0.261 4.056 2.358 3.213e-02 0.334 -3.726 SPAG17 sperm associated antigen 17 1 -118297810 AL137581 1p12 Hs.528821 7

protein binding

cytoplasm

microtubule

cilium

flagellum

flagellar axoneme

 
204496_at -0.431 8.897 -2.358 3.216e-02 0.334 -3.727 STRN3 striatin, calmodulin binding protein 3 14 -30432755 NM_014574 14q13-q21 Hs.21016 Hs.401843 13

calmodulin binding

membrane fraction

nucleus

cytoplasm

cytosol

cell cycle

membrane

 
228263_at 0.337 6.451 2.357 3.220e-02 0.335 -3.728 GRASP GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein 12 50687014 AI190755 12q13.13 Hs.407202 7

protein binding

cytoplasm

plasma membrane

signal transduction

cell junction

synapse

postsynaptic membrane

perinuclear region of cytoplasm

 
1552520_at 0.431 4.739 2.357 3.221e-02 0.335 -3.728 TMEM74 transmembrane protein 74 8 -109864521 BC030710 8q23.1 Hs.99439 4

membrane

integral to membrane

 
211979_at -0.289 6.652 -2.357 3.221e-02 0.335 -3.728 GPR107 G protein-coupled receptor 107 9 131855805 AB046844 9q34.11 Hs.512461 7

membrane

integral to membrane

 
233720_at 0.288 3.038 2.357 3.222e-02 0.335 -3.728 SORBS2 sorbin and SH3 domain containing 2 4 -186743592, -186743592, -186743592, -186743592, -186743592, -186743591, -186743591 AK000782 4q35.1 Hs.619806 Hs.655143 30

structural constituent of cytoskeleton

protein binding

nucleus

cytoplasm

cytoskeletal adaptor activity

biological_process

structural constituent of muscle

actin cytoskeleton

Z disc

perinuclear region of cytoplasm

 
1555385_at -0.395 5.463 -2.357 3.223e-02 0.335 -3.729 B4GALNT1 beta-1,4-N-acetyl-galactosaminyl transferase 1 12 -56305817 BC029828 12q13.3 Hs.591019 11

ganglioside biosynthetic process

(N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase activity

membrane fraction

Golgi apparatus

carbohydrate metabolic process

glycosphingolipid metabolic process

spermatogenesis

membrane

integral to membrane

transferase activity, transferring hexosyl groups

lipid storage

integral to Golgi membrane

lipid glycosylation

Glycosphingolipid biosynthesis - ganglio series

Metabolic pathways

222984_at -0.259 10.826 -2.357 3.223e-02 0.335 -3.729 PAIP2 poly(A) binding protein interacting protein 2 5 138705417, 138706032 AF151052 5q31.2 Hs.396644 16

protein binding

cytoplasm

regulation of translation

translation repressor activity

negative regulation of translational initiation

 
237687_at -0.684 5.915 -2.356 3.227e-02 0.335 -3.730 LOC283737 hypothetical protein LOC283737 15   H40786 15q25.3 Hs.31795 1    
214229_at 0.205 3.405 2.356 3.228e-02 0.335 -3.730 DNAH17 dynein, axonemal, heavy chain 17 17   AL122077 17q25.3 Hs.375975 Hs.713207 7

nucleotide binding

ciliary or flagellar motility

microtubule motor activity

ATP binding

axonemal dynein complex

microtubule

cilium

microtubule-based movement

ATPase activity

cilium axoneme

 
204135_at -0.563 8.536 -2.356 3.229e-02 0.335 -3.731 FILIP1L filamin A interacting protein 1-like 3 -101049461, -101049461, -101034677 NM_014890 3q12.1 Hs.104672 8

molecular_function

nucleus

cytoplasm

biological_process

membrane

myosin complex

 
218307_at 0.327 7.716 2.356 3.230e-02 0.335 -3.731 RSAD1 radical S-adenosyl methionine domain containing 1 17 45911188 NM_018346 17q21.33 Hs.8033 3

coproporphyrinogen oxidase activity

iron ion binding

cytoplasm

mitochondrion

porphyrin biosynthetic process

oxidoreductase activity

metal ion binding

4 iron, 4 sulfur cluster binding

oxidation reduction

 
231260_at 0.347 3.911 2.355 3.233e-02 0.335 -3.731 BC036928 hypothetical protein BC036928 19   AW162207 19q13.43 Hs.549564 1    
225922_at -0.542 7.307 -2.355 3.233e-02 0.335 -3.732 FNIP2 folliculin interacting protein 2 4 159909631 BE501838 4q32.1 Hs.652441 Hs.709500 4

protein binding

cytoplasm

 
232345_at 0.236 4.856 2.355 3.235e-02 0.335 -3.732 C18orf8 chromosome 18 open reading frame 8 18 19337459 AU158529 18q11.2 Hs.464779 4    
238792_at 0.334 5.515 2.355 3.235e-02 0.335 -3.732 PCNX pecanex homolog (Drosophila) 14 70443874 BF209668 14q24.2 Hs.446559 10

membrane

integral to membrane

 
223938_at 0.237 5.726 2.355 3.235e-02 0.335 -3.732 C1orf49 chromosome 1 open reading frame 49 1 176748834 AL136694 1q25.2 Hs.534501 10

microtubule cytoskeleton

 
232284_at 0.405 4.777 2.355 3.236e-02 0.335 -3.732 PSMD6 proteasome (prosome, macropain) 26S subunit, non-ATPase, 6 3 -63971270 AI206345 3p14.1 Hs.152536 35

proteasome complex

protein binding

cytosol

proteolysis

ATPase activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

231056_at 0.294 5.900 2.355 3.236e-02 0.335 -3.732 LOC339352 similar to Putative ATP-binding domain-containing protein 3-like protein 19   AI479923 19q13.41        
1438_at 0.249 5.106 2.355 3.237e-02 0.335 -3.733 EPHB3 EPH receptor B3 3 185762280 X75208 3q21-qter Hs.2913 20

nucleotide binding

receptor activity

ephrin receptor activity

ATP binding

integral to plasma membrane

protein amino acid phosphorylation

signal transduction

transmembrane receptor protein tyrosine kinase signaling pathway

axon guidance receptor activity

membrane

transferase activity

central nervous system projection neuron axonogenesis

retinal ganglion cell axon guidance

Axon guidance

202181_at -0.346 6.970 -2.355 3.238e-02 0.335 -3.733 KIAA0247 KIAA0247 14 69148062 NM_014734 14q24.1 Hs.440025 3

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
209885_at 0.555 5.857 2.354 3.238e-02 0.335 -3.733 RHOD ras homolog gene family, member D 11 66580864 BC001338 11q14.3 Hs.15114 22

nucleotide binding

GTPase activity

GTP binding

intracellular

plasma membrane

small GTPase mediated signal transduction

Rho protein signal transduction

Axon guidance

208632_at -0.572 7.818 -2.354 3.239e-02 0.335 -3.733 RNF10 ring finger protein 10 12 119456514 AL578551 12q24.31 Hs.442798 10

protein binding

cytoplasm

zinc ion binding

positive regulation of transcription

metal ion binding

 
244755_at 0.305 4.101 2.354 3.239e-02 0.335 -3.733 XPR1 xenotropic and polytropic retrovirus receptor 1 178867768 AI243681 1q25.1 Hs.227656 6

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

G-protein coupled receptor protein signaling pathway

 
220259_at 0.248 3.264 2.354 3.239e-02 0.335 -3.733 PLEKHH3 pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 17 -38073458 NM_024927 17q21.2 Hs.632251 2

cytoskeleton

 
218442_at -0.436 7.266 -2.354 3.240e-02 0.335 -3.733 TTC4 tetratricopeptide repeat domain 4 1 54954116 NM_004623 1p32.3 Hs.412482 10

binding

 
211725_s_at 0.847 4.851 2.354 3.241e-02 0.335 -3.734 BID BH3 interacting domain death agonist 22 -16596905, -16596905 BC005884 22q11.1 Hs.591054 111

release of cytochrome c from mitochondria

death receptor binding

protein binding

membrane fraction

cytoplasm

mitochondrion

mitochondrial outer membrane

cytosol

cytosol

induction of apoptosis via death domain receptors

activation of pro-apoptotic gene products

membrane

regulation of mitochondrial membrane permeability

neuron apoptosis

p53 signaling pathway

Apoptosis

Natural killer cell mediated cytotoxicity

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

Pathways in cancer

214364_at 0.285 6.133 2.354 3.242e-02 0.335 -3.734 MTERFD2 MTERF domain containing 2 2 -241683654, -241675182 W84525 2q37.3 Hs.159556 5    
227407_at -0.471 9.295 -2.353 3.247e-02 0.335 -3.735 TAPT1 transmembrane anterior posterior transformation 1 4 -15771225 AI341541 4p15.32 Hs.479223 5

receptor activity

multicellular organismal development

membrane

integral to membrane

 
222982_x_at -0.698 10.683 -2.353 3.250e-02 0.335 -3.736 SLC38A2 solute carrier family 38, member 2 12 -45038238 AF298897 12q Hs.221847 20

plasma membrane

ion transport

sodium ion transport

amino acid transport

symporter activity

integral to membrane

sodium ion binding

 
238090_at 0.291 3.262 2.353 3.250e-02 0.335 -3.736 HGSNAT heparan-alpha-glucosaminide N-acetyltransferase 8 43114748 BE327420 8p11.1 Hs.600384 11

lysosome

acyltransferase activity

heparan-alpha-glucosaminide N-acetyltransferase activity

membrane

integral to membrane

transferase activity

glycosaminoglycan metabolic process

Glycosaminoglycan degradation

Metabolic pathways

Lysosome

203213_at -0.490 3.318 -2.352 3.252e-02 0.335 -3.737 CDC2 cell division cycle 2, G1 to S and G2 to M 10 62208225, 62208296, 62209904 AL524035 10q21.1 Hs.334562 350

nucleotide binding

cyclin-dependent protein kinase activity

cyclin-dependent protein kinase activity

protein binding

ATP binding

nucleus

nucleoplasm

cytosol

spindle microtubule

protein amino acid phosphorylation

anti-apoptosis

cell cycle

mitosis

RNA polymerase II carboxy-terminal domain kinase activity

transferase activity

midbody

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

cell division

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

p53 signaling pathway

Gap junction

206718_at 0.474 8.041 2.352 3.253e-02 0.335 -3.737 LMO1 LIM domain only 1 (rhombotin 1) 11 -8202432 NM_002315 11p15 Hs.654426 21

transcription factor activity

nucleus

multicellular organismal development

zinc ion binding

cell proliferation

metal ion binding

 
216733_s_at -1.129 8.037 -2.352 3.253e-02 0.335 -3.737 GATM glycine amidinotransferase (L-arginine:glycine amidinotransferase) 15 -43440613 X86401 15q21.1 Hs.75335 23

cytoplasm

mitochondrion

mitochondrial inner membrane

mitochondrial intermembrane space

creatine biosynthetic process

response to oxidative stress

response to nutrient

embryonic development

response to organic substance

glycine amidinotransferase activity

membrane

transferase activity

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines

tissue regeneration

response to peptide hormone stimulus

response to mercury ion

Glycine, serine and threonine metabolism

Arginine and proline metabolism

Metabolic pathways

1560715_at 0.338 3.428 2.352 3.254e-02 0.335 -3.737 P4HA3 prolyl 4-hydroxylase, alpha polypeptide III 11 -73655349 AL833965 11q13.4 Hs.660541 4

procollagen-proline 4-dioxygenase activity

binding

iron ion binding

endoplasmic reticulum

endoplasmic reticulum lumen

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

L-ascorbic acid binding

metal ion binding

oxidation reduction

Arginine and proline metabolism

Metabolic pathways

1569472_s_at -0.652 2.922 -2.352 3.255e-02 0.335 -3.738 TTC3 tetratricopeptide repeat domain 3 21 37367440, 37377116 BC026260 21q22.2 Hs.368214 9

protein binding

cellular_component

vacuole

biological_process

zinc ion binding

negative regulation of cell morphogenesis involved in differentiation

negative regulation of neuron differentiation

metal ion binding

response to protein stimulus

 
203475_at 0.215 4.197 2.352 3.255e-02 0.335 -3.738 CYP19A1 cytochrome P450, family 19, subfamily A, polypeptide 1 15 -49287545 NM_000103 15q21.1 Hs.260074 375

membrane fraction

endoplasmic reticulum

steroid biosynthetic process

steroid biosynthetic process

electron carrier activity

membrane

oxygen binding

heme binding

metal ion binding

oxidation reduction

aromatase activity

Androgen and estrogen metabolism

Metabolic pathways

242855_at 0.307 5.425 2.351 3.258e-02 0.336 -3.738 KCP kielin/chordin-like protein 7 -128317236, -128304155 AI125516 7q32.1 Hs.371746 2

extracellular region

 
236183_at 0.289 3.692 2.351 3.258e-02 0.336 -3.738 DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 14 101500617 BF511676 14q32 14q32.3-qter Hs.649497 33

nucleotide binding

microtubule motor activity

protein binding

ATP binding

cytoplasm

Golgi apparatus

cytoplasmic dynein complex

microtubule

microtubule-based movement

mitotic spindle organization

ATPase activity, coupled

 
206899_at 0.319 4.901 2.351 3.261e-02 0.336 -3.739 NTSR2 neurotensin receptor 2 2 -11715754 NM_012344 2p25.1 Hs.131138 14

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger

sensory perception

neurotensin receptor activity, G-protein coupled

regulation of membrane potential

Neuroactive ligand-receptor interaction

208093_s_at -0.319 7.737 -2.351 3.262e-02 0.336 -3.739 NDEL1 nudE nuclear distribution gene E homolog (A. nidulans)-like 1 17 8279903 NM_030808 17p13.1 Hs.372123 38

condensed chromosome kinetochore

protein binding

cytoplasm

centrosome

spindle

cytoskeleton

microtubule

transport

chromosome segregation

multicellular organismal development

nervous system development

cell differentiation

 
1562953_s_at 0.391 5.118 2.351 3.263e-02 0.336 -3.740 C4orf12 chromosome 4 open reading frame 12 4 86106994 BC019264 4q21.3 Hs.46730 4    
225266_at -0.442 7.794 -2.350 3.265e-02 0.336 -3.740 ZNF652 zinc finger protein 652 17 -44721567, -44721567 AA526904 17q21.32-q21.33 Hs.463375 6

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
232745_x_at 0.405 4.034 2.350 3.265e-02 0.336 -3.740 SPEF2 sperm flagellar 2 5 35653745, 35653745 AK026817 5p13.2 Hs.298863 10

protein dimerization activity

 
210639_s_at -0.362 6.275 -2.350 3.269e-02 0.336 -3.741 ATG5 ATG5 autophagy related 5 homolog (S. cerevisiae) 6 -106739044 AF293841 6q21 Hs.486063 30

autophagic vacuole formation

protein binding

cytoplasm

autophagic vacuole

autophagy

apoptosis

pre-autophagosomal structure membrane

post-translational protein modification

Regulation of autophagy

RIG-I-like receptor signaling pathway

230388_s_at -1.724 8.135 -2.349 3.270e-02 0.336 -3.742 LOC644246 hypothetical protein LOC644246 17   AI797017 17q21.31 Hs.644600 1    
209404_s_at -0.379 6.153 -2.349 3.271e-02 0.336 -3.742 TMED7 transmembrane emp24 protein transport domain containing 7 5 -114977101 AF151867 5q22.3 Hs.642817 Hs.710895 7

endoplasmic reticulum

transport

membrane

integral to membrane

 
227112_at -0.502 7.923 -2.349 3.275e-02 0.336 -3.743 TMCC1 transmembrane and coiled-coil domain family 1 3 -130849324, -130849324 AW270037 3q22.1 Hs.477547 Hs.709936 6

membrane

integral to membrane

 
223206_s_at -0.420 4.955 -2.349 3.275e-02 0.336 -3.743 NMRAL1 NmrA-like family domain containing 1 16 -4451695 BC002927 16p13.3 Hs.288969 8

binding

regulation of nitrogen utilization

oxidoreductase activity

transcription repressor activity

oxidation reduction

 
203920_at 0.383 5.158 2.349 3.276e-02 0.336 -3.743 NR1H3 nuclear receptor subfamily 1, group H, member 3 11 47227024, 47236072 NM_005693 11p11.2 Hs.438863 Hs.513522 94

transcription factor activity

steroid hormone receptor activity

transcription coactivator activity

thyroid hormone receptor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

positive regulation of specific transcription from RNA polymerase II promoter

negative regulation of foam cell differentiation

positive regulation of triglyceride biosynthetic process

positive regulation of cholesterol efflux

negative regulation of cholesterol storage

positive regulation of cellular protein metabolic process

negative regulation of lipid transport

sequence-specific DNA binding

positive regulation of fatty acid biosynthetic process

metal ion binding

negative regulation of pinocytosis

positive regulation of lipoprotein lipase activity

PPAR signaling pathway

201906_s_at 0.637 7.024 2.348 3.277e-02 0.336 -3.744 CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like 3 37878672 NM_005808 3p21.3 Hs.475963 18

molecular_function

phosphoprotein phosphatase activity

cellular_component

nucleus

biological_process

hydrolase activity

 
215631_s_at -0.267 6.404 -2.348 3.280e-02 0.337 -3.744 BRMS1 breast cancer metastasis suppressor 1 11 -65861379 AL050008 11q13-q13.2 Hs.100426 32

molecular_function

protein binding

cellular_component

biological_process

 
32128_at 0.329 3.617 2.348 3.281e-02 0.337 -3.744 CCL18 chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated) 17 31415755 Y13710 17q11.2 Hs.143961 35

extracellular region

extracellular space

chemotaxis

inflammatory response

immune response

signal transduction

cell-cell signaling

chemokine activity

response to biotic stimulus

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

209242_at 0.613 4.967 2.348 3.281e-02 0.337 -3.745 PEG3 paternally expressed 3 19 -62013256, -62013256 AL042588 19q13.4 Hs.719209 18

nucleic acid binding

transcription factor activity

intracellular

nucleus

cytoplasm

regulation of transcription, DNA-dependent

apoptosis

zinc ion binding

metal ion binding

 
213547_at -0.322 10.366 -2.348 3.281e-02 0.337 -3.745 CAND2 cullin-associated and neddylation-dissociated 2 (putative) 3 12813170 AB014567 3p25.2 Hs.343664 7

intracellular

nucleus

transcription activator activity

TATA-binding protein binding

modification-dependent protein catabolic process

regulation of transcription

 
1555847_a_at -0.370 7.568 -2.348 3.282e-02 0.337 -3.745 LOC284454 hypothetical protein LOC284454 19   BU617052 19p13.13 Hs.436426      
228830_s_at -0.596 6.420 -2.347 3.283e-02 0.337 -3.745 ATF7 activating transcription factor 7 12 -52192109, -52192109 AI279868 12q13 Hs.12286 18

transcription factor activity

intracellular

nucleus

cytoplasm

regulation of transcription, DNA-dependent

zinc ion binding

sequence-specific DNA binding

metal ion binding

protein dimerization activity

 
1552998_at 0.378 3.086 2.347 3.283e-02 0.337 -3.745 DEFB125 defensin, beta 125 20 16350 NM_153325 20p13 Hs.380220 3

extracellular region

defense response to bacterium

 
223316_at -0.552 7.140 -2.347 3.284e-02 0.337 -3.745 CCDC3 coiled-coil domain containing 3 10 -12978630 AL136562 10p13 Hs.498720 8

endoplasmic reticulum

 
227322_s_at -0.315 8.389 -2.347 3.286e-02 0.337 -3.746 BCCIP BRCA2 and CDKN1A interacting protein 10 127502093, 127502093, 127502093 BE464077 10q26.1 Hs.370292 Hs.715543 31

regulation of cyclin-dependent protein kinase activity

protein binding

nucleus

DNA repair

response to DNA damage stimulus

cell cycle

 
201656_at 0.460 7.315 2.347 3.287e-02 0.337 -3.746 ITGA6 integrin, alpha 6 2 173000559 NM_000210 2q31.1 Hs.133397 114

receptor activity

calcium ion binding

protein binding

cell-substrate junction assembly

cell adhesion

integrin-mediated signaling pathway

integrin complex

membrane

integral to membrane

Focal adhesion

ECM-receptor interaction

Cell adhesion molecules (CAMs)

Hematopoietic cell lineage

Regulation of actin cytoskeleton

Pathways in cancer

Small cell lung cancer

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

1552276_a_at 0.334 5.144 2.346 3.292e-02 0.337 -3.748 VPS18 vacuolar protein sorting 18 homolog (S. cerevisiae) 15 38973919 NM_080432 15q14-q15 Hs.23876 11

actin binding

protein binding

lysosome

early endosome

actin filament

endosome organization

lysosome organization

zinc ion binding

protein transport

membrane

metal ion binding

 
204446_s_at -0.377 3.702 -2.346 3.293e-02 0.337 -3.748 ALOX5 arachidonate 5-lipoxygenase 10 45189634 NM_000698 10q11.2 Hs.89499 141

arachidonate 5-lipoxygenase activity

iron ion binding

calcium ion binding

protein binding

nucleus

nuclear envelope lumen

cytoplasm

cytosol

inflammatory response

membrane

lipoxygenase activity

nuclear matrix

oxidoreductase activity

leukotriene biosynthetic process

nuclear membrane

oxidation reduction

Arachidonic acid metabolism

Linoleic acid metabolism

Metabolic pathways

238454_at 0.657 4.467 2.345 3.296e-02 0.337 -3.749 ZNF540 zinc finger protein 540 19 42734147 AA013398 19q13.12 Hs.121283 5

DNA binding

intracellular

nucleus

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
207253_s_at -0.281 7.180 -2.345 3.298e-02 0.337 -3.749 UBN1 ubinuclein 1 16 4837912, 4842077 NM_016936 16p13.3 Hs.440219 9

transcription factor activity

nucleus

nucleoplasm

tight junction

regulation of transcription from RNA polymerase II promoter

chromatin modification

cell junction

interspecies interaction between organisms

 
231966_at -0.301 4.126 -2.345 3.298e-02 0.337 -3.749 PPP1R9A protein phosphatase 1, regulatory (inhibitor) subunit 9A 7 94374884 AB033048 7q21.3 Hs.21816 12

actin binding

protein binding

cytoplasm

cytoskeleton

actin filament organization

multicellular organismal development

nervous system development

synaptosome

cell junction

cell differentiation

filopodium

cortical actin cytoskeleton

dendritic spine

synapse

 
219543_at -0.550 4.884 -2.345 3.301e-02 0.337 -3.750 PBLD phenazine biosynthesis-like protein domain containing 10 -69714843, -69712422 NM_022129 10pter-q25.3 Hs.198158 7

cellular_component

biological_process

biosynthetic process

isomerase activity

 
216458_at 0.237 5.217 2.344 3.304e-02 0.338 -3.751 PQLC3 PQ loop repeat containing 3 2 11212990 AL161956 2p25.1 Hs.274415 5

membrane

integral to membrane

 
227646_at 0.504 6.777 2.344 3.305e-02 0.338 -3.751 EBF1 early B-cell factor 1 5 -158055500 BG435302 5q34 Hs.573143 21

DNA binding

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

transcription regulator activity

metal ion binding

 
228166_at 0.400 4.161 2.343 3.309e-02 0.338 -3.752 ALG2 asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae) 9 -101018527 BE644996 9q22.33 Hs.40919 25

alpha-1,3-mannosyltransferase activity

membrane fraction

nucleus

cytoplasm

dolichol-linked oligosaccharide biosynthetic process

protein localization

biosynthetic process

membrane

integral to membrane

transferase activity, transferring glycosyl groups

protein amino acid glycosylation in endoplasmic reticulum

protein anchor

protein heterodimerization activity

protein N-terminus binding

calcium-dependent protein binding

calcium-dependent protein binding

perinuclear region of cytoplasm

response to calcium ion

N-Glycan biosynthesis

Metabolic pathways

213001_at -0.609 7.322 -2.343 3.310e-02 0.338 -3.752 ANGPTL2 angiopoietin-like 2 9 -128889448 AF007150 9q34 Hs.653262 11

receptor binding

extracellular region

extracellular space

signal transduction

multicellular organismal development

 
200681_at -0.458 10.173 -2.343 3.311e-02 0.338 -3.753 GLO1 glyoxalase I 6 -38751679 NM_006708 6p21.3-p21.1 Hs.268849 46

lactoylglutathione lyase activity

cytoplasm

carbohydrate metabolic process

anti-apoptosis

anti-apoptosis

anti-apoptosis

zinc ion binding

lyase activity

metal ion binding

Pyruvate metabolism

223572_at -0.413 10.499 -2.343 3.311e-02 0.338 -3.753 HHATL hedgehog acyltransferase-like 3 -42709159, -42709159 AB042554 3p22.1 Hs.476041 4

protein binding

endoplasmic reticulum

membrane

integral to membrane

negative regulation of N-terminal protein palmitoylation

 
1555819_s_at 0.261 5.026 2.343 3.312e-02 0.338 -3.753 SAMD14 sterile alpha motif domain containing 14 17 -45545033 AY148482 17q21.33 Hs.567769 6    
201632_at -0.270 7.777 -2.343 3.313e-02 0.338 -3.753 EIF2B1 eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa 12 -122671522 NM_001414 12q24.31 Hs.716475 26

translation initiation factor activity

guanyl-nucleotide exchange factor activity

protein binding

membrane fraction

cytoplasm

eukaryotic translation initiation factor 2B complex

plasma membrane

translational initiation

response to heat

response to heat

response to glucose stimulus

oligodendrocyte development

response to peptide hormone stimulus

cellular metabolic process

cellular response to stimulus

 
230280_at -0.432 2.830 -2.343 3.314e-02 0.338 -3.754 TRIM9 tripartite motif-containing 9 14 -50532534, -50511730 BF057241 14q22.1 Hs.654750 11

protein binding

intracellular

cytoplasm

zinc ion binding

protein homodimerization activity

metal ion binding

 
215026_x_at 0.303 7.110 2.342 3.315e-02 0.338 -3.754 SCNN1A sodium channel, nonvoltage-gated 1 alpha 12 -6326271, -6326271, -6326271 U81961 12p13 Hs.591047 80

actin binding

ion channel activity

protein binding

membrane fraction

plasma membrane

ion transport

sodium ion transport

excretion

external side of plasma membrane

amiloride-sensitive sodium channel activity

integral to membrane

apical plasma membrane

cortical actin cytoskeleton

sodium ion binding

sodium channel complex

WW domain binding

response to stimulus

sensory perception of taste

Taste transduction

232315_at -0.752 3.312 -2.342 3.316e-02 0.338 -3.754 LOC400713 zinc finger protein LOC400713 19 57564981 AU149712 19q13.41 Hs.502314 3

nucleic acid binding

intracellular

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
203632_s_at -0.302 7.897 -2.342 3.317e-02 0.338 -3.754 GPRC5B G protein-coupled receptor, family C, group 5, member B 16 -19777793 NM_016235 16p12 Hs.148685 8

receptor activity

G-protein coupled receptor activity

nucleus

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

integral to membrane

cytoplasmic vesicle

 
219570_at -0.316 6.529 -2.342 3.317e-02 0.338 -3.754 KIF16B kinesin family member 16B 20 -16200748 NM_024704 20p11.23 Hs.101774 10

nucleotide binding

microtubule motor activity

protein binding

ATP binding

microtubule

microtubule-based movement

cell communication

phosphoinositide binding

 
1565759_at -0.300 5.615 -2.342 3.319e-02 0.338 -3.755 RPL13 ribosomal protein L13 16 88154590, 88154631 BG396520 16q24.3 17p11.2 Hs.410817 17

RNA binding

structural constituent of ribosome

protein binding

intracellular

cytosol

translational elongation

cytosolic ribosome

Ribosome

231793_s_at -0.888 6.074 -2.342 3.320e-02 0.338 -3.755 CAMK2D calcium/calmodulin-dependent protein kinase II delta 4 -114597792, -114591638 AA448956 4q26 Hs.144114 29

G1/S transition of mitotic cell cycle

nucleotide binding

regulation of cell growth

calmodulin-dependent protein kinase activity

calmodulin binding

ATP binding

nucleus

cytoplasm

calcium- and calmodulin-dependent protein kinase complex

calcium ion transport

transferase activity

T-tubule

protein amino acid autophosphorylation

cardiac muscle contraction

ErbB signaling pathway

Calcium signaling pathway

Wnt signaling pathway

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

GnRH signaling pathway

Melanogenesis

Glioma

222203_s_at -0.411 8.368 -2.341 3.321e-02 0.338 -3.755 RDH14 retinol dehydrogenase 14 (all-trans/9-cis/11-cis) 2 -18599469 AK023625 2p24.2 Hs.288880 12

binding

endoplasmic reticulum

cytosol

5'-nucleotidase activity

nucleoside metabolic process

oxidoreductase activity

oxidation reduction

 
218967_s_at 0.653 6.965 2.341 3.323e-02 0.338 -3.756 PTER phosphotriesterase related 10 16518972 NM_030664 10p12 Hs.444321 Hs.716660 6

zinc ion binding

catabolic process

hydrolase activity, acting on ester bonds

metal ion binding

 
218471_s_at 0.276 6.786 2.341 3.323e-02 0.338 -3.756 BBS1 Bardet-Biedl syndrome 1 11 66034694 NM_024649 11q13.1 Hs.502915 22

microtubule cytoskeleton organization

retina homeostasis

protein binding

cytoplasm

plasma membrane

sensory perception of smell

photoreceptor cell morphogenesis

flagellum assembly

fertilization

dendrite development

striatum development

hippocampus development

cerebral cortex development

adult behavior

motile secondary cilium

BBSome

sensory cilium assembly

multicellular organism growth

olfactory behavior

hormone metabolic process

cellular lipid metabolic process

fat cell differentiation

photoreceptor cell maintenance

brain morphogenesis

response to stimulus

cilium membrane

cilium morphogenesis

regulation of cilium beat frequency involved in ciliary motility

 
1554414_a_at -0.294 5.777 -2.341 3.324e-02 0.338 -3.756 OSGIN2 oxidative stress induced growth inhibitor family member 2 8 90983268, 90983934 BC031054 8q21 Hs.436445 Hs.647149 5

molecular_function

cellular_component

meiosis

germ cell development

 
204986_s_at 0.321 5.359 2.341 3.325e-02 0.338 -3.756 TAOK2 TAO kinase 2 16 29892722, 29892722 NM_016151 16p11.2 Hs.291623 16

nucleotide binding

activation of MAPKK activity

magnesium ion binding

regulation of cell growth

protein serine/threonine kinase activity

ATP binding

protein targeting to membrane

apoptosis

response to stress

regulation of cell shape

membrane

integral to membrane

cytoplasmic membrane-bounded vesicle

cell migration

transferase activity

actin cytoskeleton organization

positive regulation of JNK cascade

focal adhesion formation

MAPK signaling pathway

218049_s_at 0.299 8.378 2.341 3.326e-02 0.338 -3.757 MRPL13 mitochondrial ribosomal protein L13 8 -121477263 NM_014078 8q22.1-q22.3 Hs.333823 8

structural constituent of ribosome

intracellular

mitochondrion

mitochondrial large ribosomal subunit

ribosome

translation

Ribosome

232643_at 0.258 5.610 2.341 3.328e-02 0.339 -3.757 POLR2F polymerase (RNA) II (DNA directed) polypeptide F 22 36679619 AK026327 22q13.1 Hs.436578 87

nuclear mRNA splicing, via spliceosome

DNA binding

DNA-directed RNA polymerase activity

nucleus

nucleoplasm

nucleolus

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

RNA polymerase complex

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

Huntington's disease

239775_at 0.231 3.605 2.340 3.329e-02 0.339 -3.757 LOC100131512 hypothetical LOC100131512 7   AI761504 7p21.1        
227199_at 0.443 6.555 2.340 3.331e-02 0.339 -3.758 DIP2A DIP2 disco-interacting protein 2 homolog A (Drosophila) 21 46703289, 46703289, 46703289, 46703289, 46703289 AW027812 21q22.3 Hs.189585 11

catalytic activity

nucleus

multicellular organismal development

transcription factor binding

metabolic process

 
223449_at 0.416 6.406 2.340 3.333e-02 0.339 -3.758 SEMA6A sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 5 -115807149 AF225425 5q23.1 Hs.156967 11

receptor activity

protein binding

apoptosis

cytoskeleton organization

cell surface receptor linked signal transduction

multicellular organismal development

nervous system development

axon guidance

organ morphogenesis

membrane

integral to membrane

cell differentiation

axon

Axon guidance

225810_at -0.406 7.380 -2.340 3.333e-02 0.339 -3.758 MTMR10 myotubularin related protein 10 15 -29018435 AL572015 15q13.3 Hs.30141 Hs.706035 7

dephosphorylation

phosphatase activity

 
205030_at -2.000 6.423 -2.340 3.333e-02 0.339 -3.759 FABP7 fatty acid binding protein 7, brain 6 123142344 NM_001446 6q22-q23 Hs.26770 28

transporter activity

cytoplasm

transport

nervous system development

negative regulation of cell proliferation

lipid binding

PPAR signaling pathway

1557105_a_at 0.331 6.039 2.339 3.338e-02 0.339 -3.760 ZNF397OS zinc finger protein 397 opposite strand 18 -31086816 AW028277 18q12.2 Hs.464896 3

transcription factor activity

intracellular

nucleus

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
208833_s_at -0.401 9.752 -2.339 3.340e-02 0.339 -3.760 ATXN10 ataxin 10 22 44446350 AF119662 22q13.31 Hs.475125 25

protein binding

cytoplasm

nervous system development

cell death

dendrite

cell soma

perinuclear region of cytoplasm

 
214622_at 0.308 5.161 2.338 3.344e-02 0.339 -3.761 CYP21A2 cytochrome P450, family 21, subfamily A, polypeptide 2 6 32114060, 3413239, 3221082 M17252 6p21.3 Hs.654479 185

monooxygenase activity

steroid 21-monooxygenase activity

steroid binding

endoplasmic reticulum

microsome

C21-steroid hormone biosynthetic process

electron carrier activity

membrane

heme binding

metal ion binding

oxidation reduction

C21-Steroid hormone metabolism

Metabolic pathways

229567_at 0.309 10.800 2.337 3.349e-02 0.340 -3.763 FITM1 fat storage-inducing transmembrane protein 1 14 23670514 AI742370 14q12 Hs.128060 2

endoplasmic reticulum

membrane

integral to membrane

 
202538_s_at -0.426 7.071 -2.337 3.350e-02 0.340 -3.763 CHMP2B chromatin modifying protein 2B 3 87359102 NM_014043 3p11.2 Hs.476930 36

intracellular

cytoplasm

endosome

cytosol

protein transport

membrane

protein domain specific binding

Endocytosis

228506_at -0.289 4.818 -2.337 3.351e-02 0.340 -3.763 NSMCE4A non-SMC element 4 homolog A (S. cerevisiae) 10 -123706592 AA009947 10q26.13 Hs.258798 8    
236418_at 0.336 3.931 2.337 3.352e-02 0.340 -3.763 TTLL10 tubulin tyrosine ligase-like family, member 10 1 1099148, 1104939 AW772075 1p36.33 Hs.454835 4

tubulin-tyrosine ligase activity

cytoplasm

cytoskeleton

microtubule

protein modification process

ligase activity

protein polyglycylation

protein-glycine ligase activity

 
1553359_at 0.339 7.972 2.337 3.353e-02 0.340 -3.764 FBXL18 F-box and leucine-rich repeat protein 18 7 -5481953 NM_024963 7p22.2 Hs.623974 Hs.706587 5

modification-dependent protein catabolic process

 
213281_at -0.350 5.517 -2.336 3.354e-02 0.340 -3.764 JUN jun oncogene 1 -59019050 BE327172 1p32-p31 Hs.714791 443

nuclear chromosome

transcription factor activity

RNA polymerase II transcription factor activity

Rho GTPase activator activity

nucleus

transcription factor complex

cytosol

regulation of transcription, DNA-dependent

transforming growth factor beta receptor signaling pathway

SMAD protein nuclear translocation

transcription factor binding

negative regulation of cell proliferation

cellular process

promoter binding

negative regulation of protein amino acid autophosphorylation

leading edge cell differentiation

response to drug

positive regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

protein dimerization activity

regulation of cell cycle

SMAD protein signal transduction

R-SMAD binding

MAPK signaling pathway

ErbB signaling pathway

Wnt signaling pathway

Focal adhesion

Toll-like receptor signaling pathway

T cell receptor signaling pathway

B cell receptor signaling pathway

Neurotrophin signaling pathway

GnRH signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

226825_s_at -0.517 7.351 -2.336 3.355e-02 0.340 -3.764 TMEM165 transmembrane protein 165 4 55956846 AW665624 4q12 Hs.479766 6

membrane

integral to membrane

 
1559139_at 0.334 4.713 2.336 3.355e-02 0.340 -3.764 NOC2L nucleolar complex associated 2 homolog (S. cerevisiae) 1 -869445 BC009786 1p36.33 Hs.405987 23

protein binding

nucleus

nucleolus

 
222380_s_at 0.342 6.494 2.336 3.356e-02 0.340 -3.764 PDCD6 programmed cell death 6 5 324735 AI907083 5p15.33 Hs.50823 36

calcium ion binding

nucleus

endoplasmic reticulum

apoptosis

induction of apoptosis by extracellular signals

membrane

calcium-dependent protein binding

response to calcium ion

 
231600_at 0.215 2.078 2.336 3.357e-02 0.340 -3.765 CLEC12B C-type lectin domain family 12, member B 12 10054497, 10054497 AI657064 12p13.2 Hs.127937 3

receptor activity

binding

sugar binding

plasma membrane

integral to membrane

 
213924_at -1.006 6.968 -2.336 3.357e-02 0.340 -3.765 MPPE1 metallophosphoesterase 1 18 -11873471 BF476502 18p11.21 Hs.712666 8

membrane

integral to membrane

hydrolase activity

metal ion binding

 
205385_at 0.264 4.511 2.336 3.359e-02 0.340 -3.765 MDM2 Mdm2 p53 binding protein homolog (mouse) 12 67488237, 67489063 M92424 12q14.3-q15 Hs.484551 555

negative regulation of transcription from RNA polymerase II promoter

negative regulation of transcription from RNA polymerase II promoter

p53 binding

ubiquitin-protein ligase activity

intracellular

insoluble fraction

nucleus

nucleoplasm

nucleoplasm

nucleolus

cytoplasm

cytosol

protein complex assembly

zinc ion binding

positive regulation of cell proliferation

ligase activity

basal transcription repressor activity

basal transcription repressor activity

enzyme binding

modification-dependent protein catabolic process

positive regulation of proteasomal ubiquitin-dependent protein catabolic process

regulation of protein catabolic process

protein ubiquitination during ubiquitin-dependent protein catabolic process

identical protein binding

interspecies interaction between organisms

metal ion binding

Cell cycle

p53 signaling pathway

Ubiquitin mediated proteolysis

Endocytosis

Pathways in cancer

Glioma

Prostate cancer

Melanoma

Bladder cancer

Chronic myeloid leukemia

1405_i_at 0.432 3.772 2.336 3.359e-02 0.340 -3.765 CCL5 chemokine (C-C motif) ligand 5 17 -31222608 M21121 17q11.2-q12 Hs.514821 312

signal transducer activity

extracellular region

extracellular space

cytoplasm

cellular calcium ion homeostasis

exocytosis

cell motion

chemotaxis

inflammatory response

immune response

cellular defense response

response to oxidative stress

cell adhesion

signal transduction

cell-cell signaling

chemokine activity

response to virus

response to tumor necrosis factor

chemoattractant activity

negative regulation of viral genome replication

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

Toll-like receptor signaling pathway

Prion diseases

Epithelial cell signaling in Helicobacter pylori infection

213229_at 0.420 7.505 2.335 3.361e-02 0.340 -3.766 DICER1 dicer 1, ribonuclease type III 14 -94622317, -94622317 BF590131 14q32.13 Hs.87889 63

nucleotide binding

magnesium ion binding

angiogenesis

double-stranded RNA binding

helicase activity

endonuclease activity

ribonuclease III activity

protein binding

ATP binding

intracellular

cytoplasm

RNA processing

ATP-dependent helicase activity

RNA-induced silencing complex

hydrolase activity

stem cell maintenance

manganese ion binding

lung development

RNA interference, production of siRNA

RNA interference, targeting of mRNA for destruction

gene silencing by RNA

pre-microRNA processing

embryonic hindlimb morphogenesis

branching morphogenesis of a tube

 
220951_s_at 0.312 5.419 2.335 3.361e-02 0.340 -3.766 A1CF APOBEC1 complementation factor 10 -52236330 NM_014576 10q11.23 Hs.499643 22

nucleotide binding

double-stranded RNA binding

single-stranded RNA binding

protein binding

nucleus

cytoplasm

endoplasmic reticulum

mRNA processing

apolipoprotein B mRNA editing enzyme complex

protein stabilization

 
224720_at -0.296 6.546 -2.335 3.362e-02 0.340 -3.766 MIB1 mindbomb homolog 1 (Drosophila) 18 17575542 AW243097 18q11.2 Hs.140903 Hs.658808 15

blood vessel development

in utero embryonic development

somitogenesis

neural tube formation

heart looping

ubiquitin-protein ligase activity

protein binding

cytoplasm

plasma membrane

Notch signaling pathway

heart development

zinc ion binding

protein ubiquitination

ligase activity

modification-dependent protein catabolic process

cytoplasmic vesicle

negative regulation of neuron differentiation

positive regulation of endocytosis

metal ion binding

 
204735_at 0.446 6.391 2.335 3.362e-02 0.340 -3.766 PDE4A phosphodiesterase 4A, cAMP-specific (phosphodiesterase E2 dunce homolog, Drosophila) 19 10392332, 10402520, 10404110, 10424632 NM_006202 19p13.2 Hs.89901 32

3',5'-cyclic-AMP phosphodiesterase activity

membrane fraction

soluble fraction

signal transduction

membrane

hydrolase activity

Purine metabolism

238248_at 0.351 5.015 2.335 3.362e-02 0.340 -3.766 UMOD uromodulin 16 -20251873 AI935789 16p12.3 Hs.654425 59

calcium ion binding

extracellular region

plasma membrane

cellular defense response

negative regulation of cell proliferation

apical plasma membrane

extrinsic to membrane

anchored to membrane

 
1569383_s_at 0.273 3.984 2.335 3.362e-02 0.340 -3.766 ZFYVE28 zinc finger, FYVE domain containing 28 4 -2241122 BC032605 4p16.3 Hs.292056 3

protein binding

cytoplasm

endosome

cytosol

negative regulation of epidermal growth factor receptor activity

zinc ion binding

membrane

early endosome membrane

phosphatidylinositol 3-phosphate binding

metal ion binding

 
221050_s_at 0.480 7.075 2.335 3.363e-02 0.340 -3.766 GTPBP2 GTP binding protein 2 6 -43696195 NM_019096 6p21-p12 Hs.485449 7

nucleotide binding

GTPase activity

GTP binding

 
210080_x_at 0.273 4.463 2.335 3.365e-02 0.340 -3.767 CELA3A chymotrypsin-like elastase family, member 3A 1 22200735 D00306 1p36.12 Hs.654349 7

serine-type endopeptidase activity

proteolysis

digestion

cholesterol metabolic process

peptidase activity

 
207468_s_at 0.280 4.364 2.335 3.366e-02 0.340 -3.767 SFRP5 secreted frizzled-related protein 5 10 -99516497 NM_003015 10q24.1 Hs.279565 14

protein binding

extracellular region

extracellular space

apoptosis

establishment or maintenance of cell polarity

signal transduction

multicellular organismal development

visual perception

anatomical structure morphogenesis

Wnt receptor signaling pathway

cell differentiation

Wnt signaling pathway

201197_at -0.650 7.144 -2.335 3.367e-02 0.340 -3.767 AMD1 adenosylmethionine decarboxylase 1 6 111302679, 111302680 NM_001634 6q21-q22 Hs.159118 27

adenosylmethionine decarboxylase activity

cellular_component

spermine biosynthetic process

spermidine biosynthetic process

lyase activity

Cysteine and methionine metabolism

Arginine and proline metabolism

Metabolic pathways

200739_s_at -0.231 7.331 -2.334 3.370e-02 0.340 -3.768 SUMO3 SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae) 21 -45049959 BG338532 21q22.3 Hs.474005 40

kinetochore

protein binding

cytoplasm

protein sumoylation

modification-dependent protein catabolic process

 
225384_at -0.524 5.390 -2.334 3.372e-02 0.340 -3.769 DOCK7 dedicator of cytokinesis 7 1 -62692984 BF001267 1p31.3 Hs.406156 15

microtubule cytoskeleton organization

guanyl-nucleotide exchange factor activity

GTP binding

multicellular organismal development

nervous system development

axonogenesis

cell differentiation

axon

growth cone

neuron projection development

activation of Rac GTPase activity

positive regulation of peptidyl-serine phosphorylation

basal part of cell

establishment of neuroblast polarity

Rac GTPase binding

GTPase binding

 
213503_x_at -0.650 9.477 -2.334 3.374e-02 0.340 -3.769 ANXA2 annexin A2 15 -58426642, -58426641 BE908217 15q21-q22 Hs.511605 137

skeletal system development

angiogenesis

phospholipase inhibitor activity

calcium ion binding

calcium-dependent phospholipid binding

phosphatidylinositol-4,5-bisphosphate binding

extracellular region

basement membrane

soluble fraction

cytoplasm

early endosome

cytoskeletal protein binding

collagen fibril organization

sarcolemma

melanosome

fibrinolysis

protein complex

perinuclear region of cytoplasm

 
224302_s_at 0.373 9.562 2.333 3.375e-02 0.340 -3.769 MRPS36 mitochondrial ribosomal protein S36 5 68549328, 8323 AF271777 5q13.2 Hs.631971 4

structural constituent of ribosome

mitochondrion

mitochondrial small ribosomal subunit

ribosome

translation

 
243815_at -0.245 3.543 -2.333 3.376e-02 0.340 -3.770 PGBD4 piggyBac transposable element derived 4 15 32181565 AI336987 15q14 Hs.156317 3    
217718_s_at -0.414 10.082 -2.333 3.377e-02 0.340 -3.770 YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide 20 42947757 NM_014052 20q13.1 Hs.643544 109

cytoplasm

cytosol

protein targeting

Ras protein signal transduction

activation of pro-apoptotic gene products

enzyme binding

protein domain specific binding

negative regulation of protein amino acid dephosphorylation

melanosome

positive regulation of catalytic activity

perinuclear region of cytoplasm

Cell cycle

Neurotrophin signaling pathway

212008_at -0.873 6.229 -2.333 3.378e-02 0.340 -3.770 UBXN4 UBX domain protein 4 2 136215658 N29889 2q21.3 Hs.591242 12

protein binding

nucleus

nuclear envelope

endoplasmic reticulum

response to unfolded protein

membrane

integral to membrane

 
225546_at -0.652 7.510 -2.333 3.378e-02 0.340 -3.770 EEF2K eukaryotic elongation factor-2 kinase 16 22125092 W68180 16p12.2 Hs.498892 22

nucleotide binding

protein serine/threonine kinase activity

elongation factor-2 kinase activity

calcium ion binding

calmodulin binding

ATP binding

cytoplasm

cytosol

translational elongation

protein amino acid phosphorylation

translation factor activity, nucleic acid binding

transferase activity

 
240363_at 0.799 8.493 2.333 3.380e-02 0.340 -3.771 ANK1 ankyrin 1, erythrocytic 8 -41629901, -41629901, -41629900 AW044553 8p11.1 Hs.654438 Hs.667377 49

structural constituent of cytoskeleton

cytoplasm

plasma membrane

exocytosis

cytoskeleton organization

signal transduction

cytoskeletal adaptor activity

spectrin-associated cytoskeleton

basolateral plasma membrane

sarcoplasmic reticulum

enzyme binding

spectrin binding

M band

maintenance of epithelial cell apical/basal polarity

 
212352_s_at -0.365 10.051 -2.332 3.381e-02 0.340 -3.771 TMED10 transmembrane emp24-like trafficking protein 10 (yeast) 14 -74667923 BE780075 14q24.3 Hs.74137 22

protein binding

microsome

ER-Golgi intermediate compartment

Golgi apparatus

cis-Golgi network

protein transport

membrane

integral to membrane

vesicle-mediated transport

melanosome

zymogen granule membrane

regulated secretory pathway

vesicle targeting, to, from or within Golgi

 
1570352_at -0.290 2.276 -2.332 3.382e-02 0.340 -3.771 ATM ataxia telangiectasia mutated 11 107598768, 107663328 BG623786 11q22-q23 Hs.367437 504

nucleotide binding

DNA binding

protein serine/threonine kinase activity

ATP binding

nucleus

nucleoplasm

DNA repair

response to DNA damage stimulus

cell cycle

mitotic cell cycle spindle assembly checkpoint

reciprocal meiotic recombination

signal transduction

cell death

response to ionizing radiation

1-phosphatidylinositol-3-kinase activity

transferase activity

cytoplasmic vesicle

protein N-terminus binding

Cell cycle

p53 signaling pathway

Apoptosis

204024_at -0.231 4.762 -2.332 3.383e-02 0.340 -3.771 OSGIN2 oxidative stress induced growth inhibitor family member 2 8 90983268, 90983934 NM_004337 8q21 Hs.436445 Hs.647149 5

molecular_function

cellular_component

meiosis

germ cell development

 
213225_at -0.502 9.042 -2.332 3.383e-02 0.340 -3.772 PPM1B protein phosphatase 1B (formerly 2C), magnesium-dependent, beta isoform 2 44249503, 44249503, 44249503 AJ271832 2p21 Hs.416769 17

magnesium ion binding

protein serine/threonine phosphatase activity

protein binding

protein amino acid dephosphorylation

protein serine/threonine phosphatase complex

hydrolase activity

manganese ion binding

MAPK signaling pathway

221473_x_at -0.573 7.589 -2.332 3.384e-02 0.340 -3.772 SERINC3 serine incorporator 3 20 -42561314, -42558277 U49188 20q13.1-q13.3 Hs.272168 Hs.696043 10

protein binding

Golgi apparatus

plasma membrane

induction of apoptosis

integral to membrane

 
212493_s_at -0.348 7.673 -2.332 3.385e-02 0.340 -3.772 SETD2 SET domain containing 2 3 -47032903 AI761110 3p21.31 Hs.517941 18

DNA binding

protein binding

nucleus

methyltransferase activity

oxidoreductase activity

chromatin modification

transferase activity

histone-lysine N-methyltransferase activity

regulation of transcription

transition metal ion binding

Lysine degradation

203737_s_at -0.347 5.772 -2.332 3.385e-02 0.340 -3.772 PPRC1 peroxisome proliferator-activated receptor gamma, coactivator-related 1 10 103882776 NM_015062 10q24.32 Hs.533551 18

nucleotide binding

RNA binding

nucleus

regulation of transcription

 
1561537_at 0.279 5.817 2.331 3.390e-02 0.341 -3.773 LOC388906 hypothetical protein LOC388906 22   BC039496 22q13.2 Hs.679422 1    
205292_s_at -0.312 10.479 -2.331 3.390e-02 0.341 -3.773 HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 7 -26196080 NM_002137 7p15 Hs.487774 54

nucleotide binding

nuclear mRNA splicing, via spliceosome

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

nucleoplasm

spliceosomal complex

nucleolus

cytoplasm

RNA splicing

heterogeneous nuclear ribonucleoprotein complex

single-stranded telomeric DNA binding

RNA transport

 
222505_at -0.283 5.369 -2.331 3.392e-02 0.341 -3.774 LMBR1 limb region 1 homolog (mouse) 7 -156166330 BF510801 7q36 Hs.209989 24

receptor activity

membrane

integral to membrane

 
1569171_a_at 0.262 4.857 2.331 3.392e-02 0.341 -3.774 FXR1 fragile X mental retardation, autosomal homolog 1 3 182113145 BC034416 3q28 Hs.478407 30

RNA binding

nucleolus

cytoplasm

polysome

apoptosis

multicellular organismal development

muscle organ development

cell differentiation

 
1559746_a_at 0.325 4.826 2.331 3.393e-02 0.341 -3.774 ZNF718 zinc finger protein 718 4 43276 AK096662 4p16.3 Hs.428579 Hs.636638 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
215676_at 0.273 5.614 2.330 3.396e-02 0.341 -3.775 BRF1 BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae) 14 -104746669, -104746667 N91109 14q Hs.424484 27

transcription factor TFIIIB complex

transcription factor activity

RNA polymerase III transcription factor activity

translation initiation factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

transcription initiation from RNA polymerase III promoter

translational initiation

zinc ion binding

rRNA transcription

tRNA transcription

transcription activator activity

positive regulation of transcription

metal ion binding

 
208654_s_at -0.686 7.348 -2.330 3.397e-02 0.341 -3.775 CD164 CD164 molecule, sialomucin 6 -109794411 BF669455 6q21 Hs.520313 Hs.644693 17

extracellular region

plasma membrane

integral to plasma membrane

immune response

cell adhesion

heterophilic cell adhesion

signal transduction

multicellular organismal development

negative regulation of cell proliferation

Lysosome

201652_at -0.242 9.954 -2.329 3.400e-02 0.341 -3.776 COPS5 COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis) 8 -68117868 NM_006837 8q13.1 Hs.491912 79

protein deneddylation

transcription coactivator activity

translation initiation factor activity

protein binding

nucleus

nucleolus

cytoplasm

eukaryotic translation initiation factor 3 complex

transcription from RNA polymerase II promoter

translation

signalosome

peptidase activity

metallopeptidase activity

metal ion binding

regulation of cell cycle

 
210810_s_at 0.219 4.720 2.329 3.400e-02 0.341 -3.776 SLC6A5 solute carrier family 6 (neurotransmitter transporter, glycine), member 5 11 20577521 AF142501 11p15.2-p15.1 Hs.136557 18

neurotransmitter:sodium symporter activity

integral to plasma membrane

neurotransmitter transport

synaptic transmission

symporter activity

glycine:sodium symporter activity

membrane

 
233339_s_at 0.247 4.975 2.329 3.403e-02 0.341 -3.777 ARID1B AT rich interactive domain 1B (SWI1-like) 6 157140777 AW024272 6q25.1 Hs.291587 Hs.714899 22

DNA binding

DNA binding

transcription coactivator activity

protein binding

intracellular

nucleus

nucleolus

cytoplasm

SWI/SNF complex

chromatin modification

regulation of transcription

chromatin-mediated maintenance of transcription

 
204993_at 0.307 5.385 2.329 3.405e-02 0.341 -3.777 GNAZ guanine nucleotide binding protein (G protein), alpha z polypeptide 22 21742668 NM_002073 22q11.22 Hs.584760 30

nucleotide binding

GTPase activity

receptor signaling protein activity

GTP binding

nuclear envelope

cytoplasm

endoplasmic reticulum

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

guanyl nucleotide binding

Long-term depression

204730_at 0.256 4.462 2.329 3.406e-02 0.341 -3.778 RIMS3 regulating synaptic membrane exocytosis 3 1 -40858938 NM_014747 1pter-p22.2 Hs.654808 9

neurotransmitter transport

exocytosis

cell junction

synapse

 
215894_at 0.304 2.872 2.328 3.407e-02 0.341 -3.778 PTGDR prostaglandin D2 receptor (DP) 14 51804180 AI460323 14q22.1 Hs.306831 36

prostaglandin J receptor activity

receptor activity

G-protein coupled receptor activity

prostaglandin D receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

integral to membrane

male sex determination

Neuroactive ligand-receptor interaction

211171_s_at 0.258 3.677 2.328 3.407e-02 0.341 -3.778 PDE10A phosphodiesterase 10A 6 -165660767 AB026816 6q26 Hs.348762 13

nucleotide binding

magnesium ion binding

cytoplasm

signal transduction

zinc ion binding

hydrolase activity

cAMP binding

cGMP binding

3',5'-cyclic-GMP phosphodiesterase activity

Purine metabolism

222220_s_at 0.261 5.340 2.328 3.412e-02 0.342 -3.779 TSNAXIP1 translin-associated factor X interacting protein 1 16 66398510 AK027245 16q22.1 Hs.632212 3

cytoplasm

multicellular organismal development

spermatogenesis

cell differentiation

perinuclear region of cytoplasm

 
223070_at -0.465 10.146 -2.327 3.414e-02 0.342 -3.780 SELK selenoprotein K 3 -53894265 AF085359 3p21.31 Hs.58471 Hs.640242 7

endoplasmic reticulum

response to oxidative stress

selenium binding

 
231892_at 0.354 2.917 2.327 3.414e-02 0.342 -3.780 C9orf100 chromosome 9 open reading frame 100 9 -35649340 AA678492 9p13.3 Hs.534579 5

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

intracellular

regulation of Rho protein signal transduction

 
217668_at 0.280 4.844 2.327 3.416e-02 0.342 -3.780 C22orf36 chromosome 22 open reading frame 36 22 -23311590 BF511164 22q11.23 Hs.113314 4    
223183_at -0.361 6.888 -2.327 3.418e-02 0.342 -3.781 AGPAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 21 44109543, 44169706 AI928403 21q22.3 Hs.248785 9

1-acylglycerol-3-phosphate O-acyltransferase activity

endoplasmic reticulum

cytosol

plasma membrane

metabolic process

acyltransferase activity

phospholipid biosynthetic process

integral to membrane

transferase activity

phospholipid:diacylglycerol acyltransferase activity

Glycerolipid metabolism

Glycerophospholipid metabolism

Ether lipid metabolism

Metabolic pathways

230943_at 0.487 3.688 2.326 3.422e-02 0.342 -3.782 SOX17 SRY (sex determining region Y)-box 17 8 55533047 AI821669 8q11.23 Hs.98367 15

angiogenesis

vasculogenesis

DNA binding

nucleus

beta-catenin binding

transcription factor binding

negative regulation of Wnt receptor signaling pathway

protein destabilization

regulation of transcription

protein stabilization

Wnt signaling pathway

229711_s_at -0.407 8.176 -2.326 3.422e-02 0.342 -3.782 MDM2 Mdm2 p53 binding protein homolog (mouse) 12 67488237, 67489063 AA902480 12q14.3-q15 Hs.484551 555

negative regulation of transcription from RNA polymerase II promoter

negative regulation of transcription from RNA polymerase II promoter

p53 binding

ubiquitin-protein ligase activity

intracellular

insoluble fraction

nucleus

nucleoplasm

nucleoplasm

nucleolus

cytoplasm

cytosol

protein complex assembly

zinc ion binding

positive regulation of cell proliferation

ligase activity

basal transcription repressor activity

basal transcription repressor activity

enzyme binding

modification-dependent protein catabolic process

positive regulation of proteasomal ubiquitin-dependent protein catabolic process

regulation of protein catabolic process

protein ubiquitination during ubiquitin-dependent protein catabolic process

identical protein binding

interspecies interaction between organisms

metal ion binding

Cell cycle

p53 signaling pathway

Ubiquitin mediated proteolysis

Endocytosis

Pathways in cancer

Glioma

Prostate cancer

Melanoma

Bladder cancer

Chronic myeloid leukemia

220204_s_at 0.222 3.693 2.326 3.424e-02 0.342 -3.782 BMP8A bone morphogenetic protein 8a 1 39729904 NM_024732 1p34.3 Hs.472497 3

ossification

cytokine activity

extracellular region

extracellular space

multicellular organismal development

growth factor activity

cell differentiation

growth

cartilage development

Hedgehog signaling pathway

TGF-beta signaling pathway

211932_at -0.450 6.296 -2.325 3.427e-02 0.342 -3.783 HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 2 177785667 BF195526 2q31.2 Hs.516539 13

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

spliceosomal complex

nucleolus

cytoplasm

RNA splicing

 
205388_at -0.741 13.323 -2.325 3.430e-02 0.343 -3.784 TNNC2 troponin C type 2 (fast) 20 -43885261 NM_003279 20q12-q13.11 Hs.182421 12

skeletal muscle contraction

actin binding

calcium ion binding

troponin complex

regulation of muscle contraction

Calcium signaling pathway

240161_s_at -0.359 3.157 -2.324 3.436e-02 0.343 -3.785 CDC20B cell division cycle 20 homolog B (S. cerevisiae) 5 -54444579 AI470220 5q11.2 Hs.669184 3    
1554641_a_at 0.236 5.324 2.324 3.438e-02 0.343 -3.786 TET3 tet oncogene family member 3 2 74126957 BC022243 2p13.1 Hs.516107 6

iron ion binding

oxidoreductase activity

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors

metal ion binding

oxidation reduction

 
206632_s_at -0.269 2.185 -2.323 3.440e-02 0.343 -3.786 APOBEC3B apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B 22 37708350 NM_004900 22q13.1-q13.2 Hs.226307 18

RNA binding

cellular_component

biological_process

zinc ion binding

hydrolase activity

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines

metal ion binding

Atrazine degradation

228804_at 0.289 6.021 2.323 3.441e-02 0.343 -3.786 DGCR5 DiGeorge syndrome critical region gene 5 (non-protein coding) 22 17338026 AB051434 22q11 Hs.646438 2    
203356_at -0.575 6.737 -2.323 3.441e-02 0.343 -3.786 CAPN7 calpain 7 3 15222736 BE349584 3p24 Hs.631920 6

calcium-dependent cysteine-type endopeptidase activity

intracellular

nucleus

proteolysis

peptidase activity

cysteine-type peptidase activity

 
227268_at -0.723 6.024 -2.323 3.444e-02 0.343 -3.787 RNFT1 ring finger protein, transmembrane 1 17 -55384504 N51514 17q23.1 Hs.531701 1

protein binding

zinc ion binding

membrane

integral to membrane

metal ion binding

 
201873_s_at -0.399 6.770 -2.323 3.445e-02 0.343 -3.787 ABCE1 ATP-binding cassette, sub-family E (OABP), member 1 4 146238605 NM_002940 4q31 Hs.12013 20

nucleotide binding

ATP binding

cytoplasm

mitochondrion

RNA catabolic process

ribonuclease inhibitor activity

electron carrier activity

response to virus

ATPase activity

interspecies interaction between organisms

iron-sulfur cluster binding

 
224881_at -0.426 7.082 -2.323 3.445e-02 0.343 -3.788 VKORC1L1 vitamin K epoxide reductase complex, subunit 1-like 1 7 64975691 AV724827 7q11.21 Hs.427232 5

membrane

integral to membrane

 
202932_at -0.368 6.198 -2.323 3.445e-02 0.343 -3.788 YES1 v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1 18 -711591 NM_005433 18p11.31-p11.21 Hs.194148 69

nucleotide binding

non-membrane spanning protein tyrosine kinase activity

protein binding

ATP binding

membrane fraction

cytoplasm

cytosol

protein modification process

glucose transport

transferase activity

protein amino acid autophosphorylation

Adherens junction

Tight junction

219094_at -0.375 3.116 -2.323 3.446e-02 0.343 -3.788 ARMC8 armadillo repeat containing 8 3 139388837, 139388837 NM_014154 3q22.3 Hs.719108 4

binding

 
1569322_at 0.266 3.920 2.322 3.447e-02 0.343 -3.788 LOC439990 hypothetical gene supported by BC009626; BC048265 10   BC009626 10q22.3 Hs.365566 1    
1552678_a_at -0.618 6.183 -2.322 3.450e-02 0.344 -3.789 USP28 ubiquitin specific peptidase 28 11 -113173806 NM_020886 11q23 Hs.503891 9

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
203614_at -0.296 7.574 -2.322 3.450e-02 0.344 -3.789 UTP14C UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast) 13 51496827 NM_021645 13q14.2 Hs.512963 7

nucleus

nucleolus

rRNA processing

meiosis

multicellular organismal development

spermatogenesis

cell differentiation

small-subunit processome

 
241382_at 0.260 3.681 2.322 3.451e-02 0.344 -3.789 PCP4L1 Purkinje cell protein 4 like 1 1 159495140 W22165 1q23.3 Hs.433150 6    
1556017_at 0.296 5.856 2.322 3.452e-02 0.344 -3.789 NBEAL2 neurobeachin-like 2 3 46996176 AK092871 3p21.31 Hs.437043 5

binding

 
204601_at -0.404 5.473 -2.322 3.452e-02 0.344 -3.789 N4BP1 NEDD4 binding protein 1 16 -47130137 NM_014664 16q12.1 Hs.511839 6

nucleus

 
233467_s_at 0.296 5.526 2.321 3.453e-02 0.344 -3.790 TSPAN32 tetraspanin 32 11 2279818 AF176071 11p15.5 Hs.271954 9

molecular_function

cell-cell signaling

membrane

integral to membrane

 
203664_s_at -0.404 5.923 -2.321 3.455e-02 0.344 -3.790 POLR2D polymerase (RNA) II (DNA directed) polypeptide D 2 -128320310 NM_004805 2q21 Hs.554831 80

nucleotide binding

nuclear mRNA splicing, via spliceosome

catalytic activity

DNA-directed RNA polymerase activity

nucleus

nucleoplasm

DNA-directed RNA polymerase II, core complex

transcription

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

cellular metabolic process

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

Huntington's disease

221019_s_at 0.505 6.313 2.321 3.455e-02 0.344 -3.790 COLEC12 collectin sub-family member 12 18 -309355 NM_030781 18pter-p11.3 Hs.464422 8

scavenger receptor activity

binding

calcium ion binding

sugar binding

galactose binding

phagocytosis, recognition

pattern recognition receptor activity

carbohydrate mediated signaling

membrane

integral to membrane

low-density lipoprotein binding

innate immune response

protein homooligomerization

 
240172_at -0.591 5.537 -2.321 3.457e-02 0.344 -3.791 ERGIC2 ERGIC and golgi 2 12 -29384845 AA102332 12p11.22 Hs.339453 11

nucleus

cytoplasm

endoplasmic reticulum

Golgi apparatus

membrane

integral to membrane

vesicle-mediated transport

 
231943_at 0.288 4.601 2.321 3.459e-02 0.344 -3.791 ZFP28 zinc finger protein 28 homolog (mouse) 19 61742128 AA831323   Hs.14794 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1568830_at 0.218 3.668 2.320 3.461e-02 0.344 -3.792 IRAK3 interleukin-1 receptor-associated kinase 3 12 64869244 BC029493 12q14.3 Hs.369265 27

nucleotide binding

magnesium ion binding

negative regulation of cytokine-mediated signaling pathway

MyD88-dependent toll-like receptor signaling pathway

protein serine/threonine kinase activity

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

signal transduction

response to virus

positive regulation of macrophage tolerance induction

negative regulation of macrophage cytokine production

transferase activity

negative regulation of NF-kappaB transcription factor activity

response to peptidoglycan

response to lipopolysaccharide

negative regulation of interleukin-12 production

negative regulation of interleukin-12 production

negative regulation of interleukin-6 production

negative regulation of interleukin-6 production

negative regulation of tumor necrosis factor production

negative regulation of toll-like receptor signaling pathway

negative regulation of protein catabolic process

protein homodimerization activity

negative regulation of protein complex disassembly

response to exogenous dsRNA

negative regulation of MAP kinase activity

negative regulation of innate immune response

protein heterodimerization activity

positive regulation of NF-kappaB transcription factor activity

interleukin-1-mediated signaling pathway

response to interleukin-1

Apoptosis

Neurotrophin signaling pathway

204508_s_at -0.267 3.892 -2.320 3.461e-02 0.344 -3.792 CA12 carbonic anhydrase XII 15 -61402782 BC001012 15q22 Hs.210995 27

carbonate dehydratase activity

cytoplasm

plasma membrane

one-carbon metabolic process

zinc ion binding

integral to membrane

lyase activity

metal ion binding

Nitrogen metabolism

222834_s_at -0.560 5.748 -2.320 3.462e-02 0.344 -3.792 GNG12 guanine nucleotide binding protein (G protein), gamma 12 1 -67939736 N32508 1p31.3 Hs.431101 17

signal transducer activity

heterotrimeric G-protein complex

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

hormone-mediated signaling

MAPK signaling pathway

Chemokine signaling pathway

Regulation of actin cytoskeleton

205746_s_at -0.324 4.163 -2.320 3.464e-02 0.344 -3.792 ADAM17 ADAM metallopeptidase domain 17 2 -9546861 U86755 2p25 Hs.404914 121

response to hypoxia

positive regulation of protein amino acid phosphorylation

neutrophil mediated immunity

germinal center formation

metalloendopeptidase activity

interleukin-6 receptor binding

integrin binding

protein binding

cytoplasm

integral to plasma membrane

cell-cell junction

focal adhesion

proteolysis

epidermal growth factor receptor signaling pathway

Notch signaling pathway

peptidase activity

zinc ion binding

positive regulation of cell proliferation

response to bacterium

cell surface

positive regulation of T cell chemotaxis

actin cytoskeleton

membrane

apical plasma membrane

SH3 domain binding

PDZ domain binding

B cell differentiation

positive regulation of cell growth

positive regulation of cell migration

positive regulation of transforming growth factor beta receptor signaling pathway

positive regulation of cyclin-dependent protein kinase activity during G1/S

response to lipopolysaccharide

ruffle membrane

negative regulation of interleukin-8 production

positive regulation of chemokine production

regulation of mast cell apoptosis

T cell differentiation in the thymus

cell adhesion mediated by integrin

wound healing, spreading of epidermal cells

response to drug

membrane raft

positive regulation of epidermal growth factor receptor activity

metal ion binding

spleen development

cell motility

PMA-inducible membrane protein ectodomain proteolysis

response to high density lipoprotein stimulus

Notch signaling pathway

Alzheimer's disease

Epithelial cell signaling in Helicobacter pylori infection

203896_s_at 0.487 5.565 2.320 3.465e-02 0.344 -3.793 PLCB4 phospholipase C, beta 4 20 9024931 NM_000933 20p12 Hs.472101 17

phosphoinositide phospholipase C activity

signal transducer activity

calcium ion binding

protein binding

intracellular signaling cascade

lipid catabolic process

hydrolase activity

Inositol phosphate metabolism

Metabolic pathways

Calcium signaling pathway

Chemokine signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Wnt signaling pathway

Gap junction

Long-term potentiation

Long-term depression

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Huntington's disease

205785_at 0.327 5.456 2.320 3.465e-02 0.344 -3.793 ITGAM integrin, alpha M (complement component 3 receptor 3 subunit) 16 31178788, 31178788 J03925 16p11.2 Hs.172631 145

magnesium ion binding

glycoprotein binding

receptor activity

calcium ion binding

cell adhesion

integrin-mediated signaling pathway

integrin complex

membrane

integral to membrane

protein heterodimerization activity

Cell adhesion molecules (CAMs)

Hematopoietic cell lineage

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

238711_s_at -0.346 5.963 -2.320 3.465e-02 0.344 -3.793 ZNF148 zinc finger protein 148 3 -126427202 AI669304 3q21 Hs.592591 34

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

specific RNA polymerase II transcription factor activity

intracellular

nucleus

DNA-directed RNA polymerase II, core complex

nucleolus

Golgi apparatus

cellular defense response

gamete generation

zinc ion binding

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

 
203380_x_at -0.292 8.103 -2.320 3.465e-02 0.344 -3.793 SFRS5 splicing factor, arginine/serine-rich 5 14 69303581, 69303586 NM_006925 14q24 Hs.632326 28

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

mRNA splice site selection

RNA splicing

RS domain binding

 
203099_s_at -0.256 5.865 -2.319 3.468e-02 0.344 -3.793 CDYL chromodomain protein, Y-like 6 4651391, 4721678, 4781330, 4835224 AF081258 6p25.1 Hs.269092 8

chromatin

chromatin binding

histone acetyltransferase activity

nucleus

chromatin assembly or disassembly

spermatogenesis

metabolic process

acyltransferase activity

transferase activity

regulation of transcription

 
222338_x_at 0.256 6.879 2.319 3.472e-02 0.344 -3.794 LOC646808 similar to L antigen family, member 3 9   AI375965 9p21.1        
1569110_x_at -0.942 8.455 -2.319 3.473e-02 0.344 -3.795 LOC728613 programmed cell death 6 pseudogene 5 -1650671 BC020552 5p15.33 Hs.379186 2    
216750_at 0.299 4.585 2.319 3.473e-02 0.344 -3.795 APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 4 -40506801 AK024871 4p14-p13 Hs.479602 12

beta-amyloid binding

nucleus

cell cycle arrest

intracellular signaling cascade

transcription factor binding

membrane

lamellipodium

negative regulation of cell growth

growth cone

synapse

regulation of transcription

negative regulation of S phase of mitotic cell cycle

 
201372_s_at -0.881 5.309 -2.319 3.473e-02 0.344 -3.795 CUL3 cullin 3 2 -225043112 NM_003590 2q36.2 Hs.372286 39

G1/S transition of mitotic cell cycle

protein binding

nucleus

Golgi apparatus

ubiquitin-dependent protein catabolic process

cell cycle arrest

cyclin catabolic process

positive regulation of cell proliferation

induction of apoptosis by intracellular signals

cullin-RING ubiquitin ligase complex

ubiquitin protein ligase binding

Ubiquitin mediated proteolysis

201098_at -0.361 7.137 -2.318 3.474e-02 0.344 -3.795 COPB2 coatomer protein complex, subunit beta 2 (beta prime) 3 -140559122 NM_004766 3q23 Hs.719115 25

structural molecule activity

protein binding

cytoplasm

Golgi apparatus

cytosol

intracellular protein transport

retrograde vesicle-mediated transport, Golgi to ER

retrograde vesicle-mediated transport, Golgi to ER

intra-Golgi vesicle-mediated transport

membrane

membrane organization

vesicle-mediated transport

membrane coat

COPI vesicle coat

cytoplasmic vesicle

COPI coating of Golgi vesicle

 
224308_s_at -0.434 5.114 -2.318 3.476e-02 0.344 -3.795 INTS2 integrator complex subunit 2 17 -57297511 AL136800 17q23.2 Hs.279646 7

protein binding

intracellular

nucleus

membrane

integral to membrane

snRNA processing

integrator complex

 
227990_at -0.559 7.637 -2.318 3.478e-02 0.344 -3.796 SLU7 SLU7 splicing factor homolog (S. cerevisiae) 5 -159761225 AA843238 5q33.3 Hs.435342 9

alternative nuclear mRNA splicing, via spliceosome

second spliceosomal transesterification activity

nuclear mRNA 3'-splice site recognition

nucleic acid binding

nucleus

spliceosomal complex

cytoplasm

mRNA processing

zinc ion binding

RNA splicing

nuclear speck

small nuclear ribonucleoprotein complex

pre-mRNA 3'-splice site binding

metal ion binding

 
228425_at 0.574 4.928 2.318 3.478e-02 0.344 -3.796 LOC654433 hypothetical LOC654433 2 113710316 BF056746 2q13 Hs.656660 4    
215508_at 0.260 2.568 2.318 3.478e-02 0.344 -3.796 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 2 -111111882 AL137654 2q14 Hs.469649 55

nucleotide binding

condensed chromosome kinetochore

condensed nuclear chromosome, centromeric region

protein serine/threonine kinase activity

ATP binding

nucleus

spindle pole body

protein amino acid phosphorylation

cell cycle

mitosis

mitotic cell cycle spindle assembly checkpoint

cell proliferation

transferase activity

cell division

Cell cycle

219660_s_at 0.392 3.738 2.318 3.479e-02 0.344 -3.796 ATP8A2 ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 13 24844208 NM_016529 13q12 Hs.444957 4

nucleotide binding

magnesium ion binding

phospholipid-translocating ATPase activity

ATP binding

ATP biosynthetic process

negative regulation of cell proliferation

ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism

phospholipid transport

membrane

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

 
205325_at 0.268 4.989 2.318 3.479e-02 0.344 -3.796 PHYHIP phytanoyl-CoA 2-hydroxylase interacting protein 8 -22133160 NM_014759 8p21.3 Hs.334688 8

protein binding

 
210768_x_at -0.241 6.490 -2.318 3.480e-02 0.344 -3.796 TMCO1 transmembrane and coiled-coil domains 1 1 -163960151 AF274935 1q22-q25 Hs.31498 Hs.715707 12

endoplasmic reticulum

Golgi apparatus

membrane

integral to membrane

 
221774_x_at -0.243 5.992 -2.318 3.480e-02 0.344 -3.796 FAM48A family with sequence similarity 48, member A 13 -36481450 AW003334 13q13.3 Hs.435815 14

protein binding

multicellular organismal development

gastrulation

 
209647_s_at -0.435 6.006 -2.317 3.480e-02 0.344 -3.796 SOCS5 suppressor of cytokine signaling 5 2 46779602, 46779852 AW664421 2p21 Hs.468426 14

epidermal growth factor receptor binding

protein binding

epidermal growth factor receptor signaling pathway

intracellular signaling cascade

negative regulation of signal transduction

cell growth

cytokine-mediated signaling pathway

modification-dependent protein catabolic process

regulation of growth

positive regulation of T-helper 1 cell differentiation

negative regulation of T-helper 2 cell differentiation

Jak-STAT signaling pathway

231718_at -0.446 7.081 -2.317 3.483e-02 0.344 -3.797 SLU7 SLU7 splicing factor homolog (S. cerevisiae) 5 -159761225 NM_006425 5q33.3 Hs.435342 9

alternative nuclear mRNA splicing, via spliceosome

second spliceosomal transesterification activity

nuclear mRNA 3'-splice site recognition

nucleic acid binding

nucleus

spliceosomal complex

cytoplasm

mRNA processing

zinc ion binding

RNA splicing

nuclear speck

small nuclear ribonucleoprotein complex

pre-mRNA 3'-splice site binding

metal ion binding

 
201121_s_at 0.374 7.839 2.317 3.484e-02 0.344 -3.797 PGRMC1 progesterone receptor membrane component 1 X 118254238 NM_006667 Xq22-q24 Hs.90061 26

receptor activity

steroid binding

protein binding

nucleus

nucleolus

endoplasmic reticulum

microsome

cell surface

membrane

integral to membrane

heme binding

 
1554192_s_at 0.237 6.756 2.316 3.487e-02 0.345 -3.798 C4orf23 chromosome 4 open reading frame 23 4 8507042 BC035655 4p16.1 Hs.566191 5

cytoplasm

tRNA processing

methyltransferase activity

transferase activity

 
1556259_at 0.202 3.943 2.316 3.489e-02 0.345 -3.799 CADM1 cell adhesion molecule 1 11 -114549554 T51129 11q23.2 Hs.370510 50

T cell mediated cytotoxicity

receptor binding

receptor binding

plasma membrane

cell-cell junction

apoptosis

immune response

cell adhesion

homophilic cell adhesion

heterophilic cell adhesion

multicellular organismal development

spermatogenesis

protein C-terminus binding

cell recognition

cell recognition

integral to membrane

basolateral plasma membrane

cell differentiation

PDZ domain binding

susceptibility to natural killer cell mediated cytotoxicity

susceptibility to natural killer cell mediated cytotoxicity

protein homodimerization activity

positive regulation of cytokine secretion

activated T cell proliferation

detection of stimulus

detection of stimulus

Cell adhesion molecules (CAMs)

214792_x_at 0.397 5.584 2.316 3.491e-02 0.345 -3.799 VAMP2 vesicle-associated membrane protein 2 (synaptobrevin 2) 17 -8003189 AI955119 17p13.1 Hs.25348 66

protein binding

integral to plasma membrane

membrane

vesicle-mediated transport

synaptosome

cell junction

cytoplasmic vesicle

synapse

SNARE interactions in vesicular transport

218890_x_at 0.719 8.628 2.316 3.491e-02 0.345 -3.799 MRPL35 mitochondrial ribosomal protein L35 2 86280066 NM_016622 2p11.2 Hs.433439 8

structural constituent of ribosome

mitochondrion

mitochondrial ribosome

ribosome

translation

translation regulator activity

 
201434_at -0.288 8.388 -2.316 3.493e-02 0.345 -3.800 TTC1 tetratricopeptide repeat domain 1 5 159368757 NM_003314 5q33.3 Hs.519718 10

protein folding

unfolded protein binding

 
214417_s_at 0.248 3.783 2.315 3.495e-02 0.345 -3.800 FETUB fetuin B 3 187840842 N39010 3q27 Hs.81073 10

molecular_function

cysteine-type endopeptidase inhibitor activity

extracellular region

biological_process

 
223160_s_at -0.312 6.532 -2.315 3.496e-02 0.345 -3.800 SMEK1 SMEK homolog 1, suppressor of mek1 (Dictyostelium) 14 -90993708 AK024297 14q32.12 Hs.533887 9

protein binding

nucleus

cytoplasm

centrosome

 
212977_at 0.670 8.033 2.315 3.496e-02 0.345 -3.800 CXCR7 chemokine (C-X-C motif) receptor 7 2 237143118 AI817041 2q37.3 Hs.471751 21

receptor activity

G-protein coupled receptor activity

protein binding

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

biological_process

integral to membrane

interspecies interaction between organisms

 
213387_at -0.387 5.481 -2.315 3.498e-02 0.345 -3.801 ATAD2B ATPase family, AAA domain containing 2B 2 -23825037 AB033066 2p24.1-p23.3 Hs.467862 5

nucleotide binding

ATP binding

nucleoside-triphosphatase activity

 
223698_at -0.501 4.371 -2.315 3.498e-02 0.345 -3.801 SLC25A36 solute carrier family 25, member 36 3 142143351 AL136803 3q23 Hs.144130 7

transporter activity

binding

mitochondrion

mitochondrial inner membrane

transport

membrane

integral to membrane

response to estradiol stimulus

 
219050_s_at -0.267 5.120 -2.315 3.498e-02 0.345 -3.801 ZNHIT2 zinc finger, HIT type 2 11 -64640450 NM_014205 11q13 Hs.121025 7

zinc ion binding

metal ion binding

 
220188_at 0.273 3.516 2.315 3.498e-02 0.345 -3.801 JPH3 junctophilin 3 16 86193999 NM_020655 16q24.3 Hs.592068 18

molecular_function

protein binding

endoplasmic reticulum

plasma membrane

junctional sarcoplasmic reticulum membrane

integral to membrane

regulation of ryanodine-sensitive calcium-release channel activity

calcium ion transport into cytosol

 
225492_at -0.502 7.533 -2.314 3.501e-02 0.345 -3.802 TMEM33 transmembrane protein 33 4 41631893 BG500396 4p13 Hs.31082 5

protein binding

biological_process

membrane

integral to membrane

melanosome

 
215355_at 0.275 2.647 2.314 3.501e-02 0.345 -3.802 POU2F3 POU class 2 homeobox 3 11 119616160 AI686582 11q23.3 Hs.227115 13

transcription factor activity

nucleus

transcription factor complex

epidermis development

keratinocyte differentiation

wound healing

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

protein dimerization activity

 
213462_at 0.376 5.750 2.314 3.503e-02 0.345 -3.802 NPAS2 neuronal PAS domain protein 2 2 100803044 AW000928 2q11.2 Hs.156832 Hs.705895 23

transcription factor activity

signal transducer activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

signal transduction

central nervous system development

circadian sleep/wake cycle

locomotor rhythm

positive regulation of transcription from RNA polymerase II promoter

rhythmic process

Hsp90 protein binding

Circadian rhythm - mammal

223610_at 0.279 5.881 2.314 3.503e-02 0.345 -3.802 SEMA5B sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B 3 -124110732 BC002776 3q21.1 Hs.210870 6

receptor activity

multicellular organismal development

nervous system development

membrane

integral to membrane

cell differentiation

Axon guidance

235397_at 0.360 5.991 2.314 3.506e-02 0.345 -3.803 NCRNA00174 non-protein coding RNA 174 7 -65478466 AA020789 7q11.21 Hs.50755 3    
1556601_a_at 0.253 4.468 2.314 3.507e-02 0.345 -3.803 SPATA13 spermatogenesis associated 13 13 23632886 R69077 13q12.12 Hs.657121 7

Rho guanyl-nucleotide exchange factor activity

intracellular

regulation of Rho protein signal transduction

 
210443_x_at 0.229 6.416 2.313 3.509e-02 0.345 -3.804 OGFR opioid growth factor receptor 20 60906621 AF172452 20q13.3 Hs.67896 17

regulation of cell growth

receptor activity

opioid receptor activity

cellular_component

nucleus

cytoplasm

membrane

 
203348_s_at -0.510 5.178 -2.313 3.509e-02 0.345 -3.804 ETV5 ets variant 5 3 -187246799 BF060791 3q28 Hs.43697 21

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

sequence-specific DNA binding

 
202290_at -0.390 7.675 -2.313 3.510e-02 0.345 -3.804 PDAP1 PDGFA associated protein 1 7 -98830524 NM_014891 7q22.1 Hs.632296 8

signal transduction

cell proliferation

 
221924_at 0.327 6.611 2.313 3.510e-02 0.345 -3.804 ZMIZ2 zinc finger, MIZ-type containing 2 7 44755054, 44762311 AW444969 7p13 Hs.600681 Hs.77978 11

protein binding

nucleus

zinc ion binding

ligand-dependent nuclear receptor transcription coactivator activity

nuclear replication fork

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

 
216428_x_at 0.250 4.056 2.313 3.511e-02 0.345 -3.804 KIR3DX1 killer cell immunoglobulin-like receptor, three domains, X1 19 59735720 AK024467 19q13.42 Hs.288520 4    
201535_at -0.400 9.068 -2.313 3.514e-02 0.345 -3.805 UBL3 ubiquitin-like 3 13 -29236545 NM_007106 13q12-q13 Hs.145575 12

intracellular

plasma membrane

 
202511_s_at -0.297 7.491 -2.313 3.514e-02 0.345 -3.805 ATG5 ATG5 autophagy related 5 homolog (S. cerevisiae) 6 -106739044 AK001899 6q21 Hs.486063 30

autophagic vacuole formation

protein binding

cytoplasm

autophagic vacuole

autophagy

apoptosis

pre-autophagosomal structure membrane

post-translational protein modification

Regulation of autophagy

RIG-I-like receptor signaling pathway

227246_at -0.447 5.982 -2.312 3.516e-02 0.346 -3.806 PLRG1 pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) 4 -155677111 BF438014 4q31.2-q32.1 Hs.249996 10

transcription corepressor activity

signal transducer activity

protein binding

nucleus

spliceosomal complex

mRNA processing

RNA splicing

nuclear speck

 
213967_at 0.313 3.134 2.311 3.524e-02 0.346 -3.807 RALYL RALY RNA binding protein-like 8 85258007, 85258140, 85259654 AI634532 8q21.2 Hs.121663 8

nucleotide binding

RNA binding

identical protein binding

 
217982_s_at -0.258 11.042 -2.311 3.524e-02 0.346 -3.807 MORF4L1 mortality factor 4 like 1 15 76952226 NM_006791 15q24 Hs.374503 25

protein binding

nucleus

DNA repair

response to DNA damage stimulus

chromatin modification

histone deacetylation

Sin3 complex

NuA4 histone acetyltransferase complex

regulation of growth

histone H4 acetylation

histone H2A acetylation

regulation of transcription

 
218918_at 0.295 5.636 2.311 3.524e-02 0.346 -3.808 MAN1C1 mannosidase, alpha, class 1C, member 1 1 25816545 NM_020379 1p35 Hs.197043 26

mannosyl-oligosaccharide 1,2-alpha-mannosidase activity

calcium ion binding

Golgi apparatus

protein amino acid N-linked glycosylation

metabolic process

membrane

integral to membrane

hydrolase activity, acting on glycosyl bonds

integral to Golgi membrane

N-Glycan biosynthesis

Metabolic pathways

204062_s_at -0.528 5.590 -2.311 3.524e-02 0.346 -3.808 ULK2 unc-51-like kinase 2 (C. elegans) 17 -19614735 BG526973 17p11.2 Hs.168762 10

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

signal transduction

axonogenesis

transferase activity

Regulation of autophagy

mTOR signaling pathway

229399_at -0.816 4.808 -2.311 3.528e-02 0.346 -3.808 C10orf118 chromosome 10 open reading frame 118 10 -115871963 BF438440 10q25.3 Hs.159066 Hs.603328 9    
1568978_s_at 0.315 5.406 2.310 3.528e-02 0.346 -3.808 C11orf21 chromosome 11 open reading frame 21 11 -2274082 BM547346 11p15.5 Hs.559181 2

cytoplasm

 
215946_x_at 0.346 5.094 2.310 3.528e-02 0.346 -3.808 IGLL3 immunoglobulin lambda-like polypeptide 3 22 24043887 AL022324 22q11.2 22q11.23 Hs.567636 3    
219604_s_at 0.233 4.535 2.310 3.529e-02 0.346 -3.809 ZNF3 zinc finger protein 3 7 -99505529, -99499588 NM_017715 7q22.1 Hs.435302 10

transcription factor activity

intracellular

nucleus

nucleus

nucleolus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

cell differentiation

identical protein binding

leukocyte activation

metal ion binding

 
1570515_a_at -0.867 7.385 -2.310 3.529e-02 0.346 -3.809 FILIP1 filamin A interacting protein 1 6 -76074519 BC029425 6q14.1 Hs.696158 9    
224662_at -0.430 9.452 -2.310 3.530e-02 0.346 -3.809 KIF5B kinesin family member 5B 10 -32337943 AA630326 10pter-q22.1 Hs.644646 36

nucleotide binding

microtubule motor activity

protein binding

ATP binding

cytoplasm

cytoskeleton

kinesin complex

microtubule

microtubule-based movement

cytoplasm organization

microtubule binding

ciliary rootlet

neuron projection

membrane-bounded organelle

vesicle transport along microtubule

perinuclear region of cytoplasm

 
213546_at -0.578 6.584 -2.310 3.533e-02 0.346 -3.810 DKFZP586I1420 hypothetical protein DKFZp586I1420 7 30376190 AL050378 7p14.3 Hs.112423 2    
203015_s_at -0.304 4.471 -2.310 3.533e-02 0.346 -3.810 SSX2IP synovial sarcoma, X breakpoint 2 interacting protein 1 -84882184 AW136988 1p22.3 Hs.22587 14

protein binding

nucleus

adherens junction

cell adhesion

cell junction

protein complex

Adherens junction

205909_at 0.372 4.225 2.310 3.534e-02 0.346 -3.810 POLE2 polymerase (DNA directed), epsilon 2 (p59 subunit) 14 -49180028 NM_002692 14q21-q22 Hs.162777 14

DNA binding

DNA-directed DNA polymerase activity

nucleus

nucleoplasm

DNA-dependent DNA replication

DNA repair

nucleotide-excision repair, DNA gap filling

transferase activity

nucleotidyltransferase activity

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

DNA replication

Base excision repair

Nucleotide excision repair

230242_at 0.271 6.105 2.310 3.535e-02 0.346 -3.810 NFASC neurofascin homolog (chicken) 1 203064404, 203064404, 203179976 AA634220 1q32.1 Hs.13349 28

protein binding

plasma membrane

cell adhesion

integral to membrane

Cell adhesion molecules (CAMs)

212465_at -0.395 9.209 -2.309 3.537e-02 0.346 -3.811 SETD3 SET domain containing 3 14 -98945893, -98933835 AA524500 14q32.2 Hs.510407 6    
221970_s_at -0.311 7.785 -2.309 3.540e-02 0.347 -3.811 NOL11 nucleolar protein 11 17 63144522 AU158148 17q24.2 Hs.463936 5

nucleus

nucleolus

 
221808_at -0.361 7.489 -2.309 3.540e-02 0.347 -3.811 RAB9A RAB9A, member RAS oncogene family X 13617261 NM_004251 Xp22.2 Hs.495704 24

Golgi membrane

nucleotide binding

GTPase activity

protein binding

GTP binding

lysosome

late endosome

endoplasmic reticulum

endoplasmic reticulum membrane

Golgi apparatus

plasma membrane

small GTPase mediated signal transduction

protein transport

 
216988_s_at -0.727 9.541 -2.309 3.541e-02 0.347 -3.812 PTP4A2 protein tyrosine phosphatase type IVA, member 2 1 -32146379 L48722 1p35 Hs.470477 Hs.712749 Hs.713025 21

prenylated protein tyrosine phosphatase activity

protein binding

cytoplasm

early endosome

plasma membrane

protein amino acid dephosphorylation

hydrolase activity

 
210370_s_at 0.285 3.227 2.309 3.541e-02 0.347 -3.812 LY9 lymphocyte antigen 9 1 159032551, 159032551 AF244129 1q21.3-q22 Hs.403857 17

molecular_function

protein binding

cell adhesion

membrane

integral to membrane

immunoglobulin mediated immune response

 
1555905_a_at -0.957 4.532 -2.308 3.542e-02 0.347 -3.812 C3orf23 chromosome 3 open reading frame 23 3 44354614, 44354947, 44354947 AI147556 3p21.31 Hs.55131 8

mitochondrion

 
207103_at -0.185 1.987 -2.308 3.543e-02 0.347 -3.812 KCND2 potassium voltage-gated channel, Shal-related subfamily, member 2 7 119700957 NM_012281 7q31 Hs.654739 39

regulation of action potential

voltage-gated ion channel activity

voltage-gated potassium channel activity

protein binding

protein binding

plasma membrane

ion transport

potassium ion transport

synaptic transmission

voltage-gated potassium channel complex

zinc ion binding

cell surface

integral to membrane

potassium ion binding

cell projection

dendritic spine

metal ion binding

 
209976_s_at 0.280 3.927 2.308 3.543e-02 0.347 -3.812 CYP2E1 cytochrome P450, family 2, subfamily E, polypeptide 1 10 135190856 AF182276 10q24.3-qter Hs.12907 366

endoplasmic reticulum

endoplasmic reticulum membrane

microsome

electron carrier activity

membrane

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen

drug metabolic process

oxygen binding

oxygen binding

heme binding

metal ion binding

oxidation reduction

Arachidonic acid metabolism

Linoleic acid metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

Metabolic pathways

232141_at -0.298 6.465 -2.308 3.548e-02 0.347 -3.813 U2AF1 U2 small nuclear RNA auxiliary factor 1 21 -43386134 AU144161 21q22.3 Hs.365116 47

nucleotide binding

nuclear mRNA splicing, via spliceosome

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

spliceosomal complex

zinc ion binding

RNA splicing

Cajal body

metal ion binding

RS domain binding

 
204808_s_at -0.337 7.234 -2.307 3.551e-02 0.347 -3.814 TMEM5 transmembrane protein 5 12 62459903 NM_014254 12q14.2 Hs.216386 3

integral to plasma membrane

membrane

 
225373_at 0.290 6.153 2.307 3.552e-02 0.347 -3.814 C10orf54 chromosome 10 open reading frame 54 10 -73177318 BE271644 10q22.1 Hs.47382 9

receptor activity

membrane

integral to membrane

 
218989_x_at -0.379 5.463 -2.307 3.552e-02 0.347 -3.814 SLC30A5 solute carrier family 30 (zinc transporter), member 5 5 68425573, 68425637 NM_022902 5q12.1 Hs.631975 10

zinc ion transmembrane transporter activity

membrane fraction

Golgi apparatus

integral to plasma membrane

cation transport

cobalt ion transport

zinc ion transport

cellular zinc ion homeostasis

zinc ion binding

cation transmembrane transporter activity

response to zinc ion

regulation of proton transport

membrane

apical plasma membrane

secretory granule

 
243954_at 0.328 3.946 2.307 3.553e-02 0.347 -3.815 LOC285286 hypothetical protein LOC285286 3   AI149729 3p14.2 Hs.559386 1    
227257_s_at -0.463 7.251 -2.307 3.554e-02 0.347 -3.815 C10orf46 chromosome 10 open reading frame 46 10 -120430483 AW973842 10q26.11 Hs.719193 4

ubiquitin-dependent protein catabolic process

cullin-RING ubiquitin ligase complex

ubiquitin protein ligase binding

 
201791_s_at 0.252 5.806 2.306 3.556e-02 0.347 -3.815 DHCR7 7-dehydrocholesterol reductase 11 -70823104 NM_001360 11q13.2-q13.5 Hs.503134 48

blood vessel development

protein binding

nuclear outer membrane

endoplasmic reticulum

endoplasmic reticulum membrane

cholesterol biosynthetic process

post-embryonic development

membrane

integral to membrane

oxidoreductase activity

cell differentiation

lung development

multicellular organism growth

regulation of cell proliferation

7-dehydrocholesterol reductase activity

7-dehydrocholesterol reductase activity

oxidation reduction

Steroid biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

206282_at 0.265 2.943 2.306 3.558e-02 0.347 -3.816 NEUROD1 neurogenic differentiation 1 2 -182249438 NM_002500 2q32 Hs.574626 Hs.709709 64

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

nitric oxide mediated signal transduction

multicellular organismal development

transcription factor binding

response to glucose stimulus

anterior/posterior pattern formation

transcription activator activity

neurogenesis

hindbrain development

endocrine pancreas development

glucose homeostasis

camera-type eye development

negative regulation of apoptosis

sequence-specific DNA binding

cell fate commitment

positive regulation of transcription from RNA polymerase II promoter

protein heterodimerization activity

embryonic organ morphogenesis

regulation of insulin secretion

Maturity onset diabetes of the young

209028_s_at -0.383 6.373 -2.306 3.558e-02 0.347 -3.816 ABI1 abl-interactor 1 10 -27075530 AF006516 10p11.2 Hs.508148 39

intracellular

soluble fraction

nucleus

cytoplasm

endoplasmic reticulum

cytosol

cytoskeleton

transmembrane receptor protein tyrosine kinase signaling pathway

cytoskeletal protein binding

negative regulation of cell proliferation

peptidyl-tyrosine phosphorylation

synaptosome

lamellipodium

cell junction

filopodium

growth cone

synapse

 
1561042_at 0.537 4.227 2.306 3.559e-02 0.347 -3.816 ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 10 -33236244, -33229251, -33229251, -33229251 AF086249 10p11.2 Hs.643813 512

G1/S transition of mitotic cell cycle

in utero embryonic development

cell fate specification

receptor activity

integrin binding

focal adhesion

cellular defense response

cell adhesion

homophilic cell adhesion

leukocyte adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

positive regulation of cell proliferation

integrin complex

germ cell migration

cell surface

integral to membrane

synaptosome

B cell differentiation

neuromuscular junction

ruffle membrane

cell-cell adhesion mediated by integrin

sarcolemma

melanosome

identical protein binding

interspecies interaction between organisms

sarcomere organization

negative regulation of cell differentiation

protein heterodimerization activity

regulation of cell cycle

cardiac muscle cell differentiation

Axon guidance

Focal adhesion

ECM-receptor interaction

Cell adhesion molecules (CAMs)

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Pathogenic Escherichia coli infection - EHEC

Pathways in cancer

Small cell lung cancer

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

201237_at -0.595 9.127 -2.306 3.560e-02 0.347 -3.816 CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 7 116289798 AV685920 7q31.2-q31.3 Hs.446123 14

actin binding

protein binding

protein complex assembly

cell motion

F-actin capping protein complex

actin cytoskeleton organization

actin filament capping

 
216049_at -0.350 2.824 -2.306 3.561e-02 0.347 -3.817 RHOBTB3 Rho-related BTB domain containing 3 5 95092605 AK023621 5q15 Hs.445030 13

protein binding

ATP binding

ATPase activity

Rab GTPase binding

retrograde transport, endosome to Golgi

 
236979_at 0.190 3.900 2.306 3.562e-02 0.347 -3.817 BCL2L15 BCL2-like 15 1 -114220958 AI821801 1p13.2 Hs.123106 7

apoptosis

 
228820_at -0.415 6.222 -2.306 3.562e-02 0.347 -3.817 XPNPEP3 X-prolyl aminopeptidase (aminopeptidase P) 3, putative 22 39583039 BE674036 22q13.31-q13.33 Hs.529163 7

aminopeptidase activity

mitochondrion

peptidase activity

metallopeptidase activity

cellular process

manganese ion binding

metal ion binding

 
224813_at -0.433 8.016 -2.306 3.562e-02 0.347 -3.817 WASL Wiskott-Aldrich syndrome-like 7 -123109232 AL523820 7q31.3 Hs.143728 Hs.708402 58

actin binding

small GTPase regulator activity

protein binding

nucleus

nucleolus

cytoplasm

protein complex assembly

cell motion

actin polymerization or depolymerization

response to bacterium

actin cytoskeleton

lamellipodium

regulation of transcription

Chemokine signaling pathway

Adherens junction

Fc gamma R-mediated phagocytosis

Regulation of actin cytoskeleton

Pathogenic Escherichia coli infection - EHEC

1562017_at 0.254 3.272 2.305 3.566e-02 0.348 -3.818 LOC100130654 hypothetical protein LOC100130654 17   AK095243 17q21.2 Hs.636509 1    
225893_at -0.442 8.057 -2.305 3.567e-02 0.348 -3.818 RC3H1 ring finger and CCCH-type zinc finger domains 1 1 -172166974 AL589593 1q25.1 Hs.30258 3

RNA binding

protein binding

cytoplasm

zinc ion binding

metal ion binding

 
226737_at 0.372 7.538 2.305 3.569e-02 0.348 -3.818 SLC25A42 solute carrier family 25, member 42 19 19035807 BG235908 19p13.11 Hs.303669 3

binding

mitochondrion

mitochondrial inner membrane

transport

membrane

integral to membrane

 
220186_s_at 0.191 5.263 2.304 3.571e-02 0.348 -3.819 PCDH24 protocadherin 24 5 175908970 NM_017675 5q35.2 Hs.4205 9

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

cell junction

negative regulation of cell growth

 
212199_at -0.262 8.231 -2.304 3.571e-02 0.348 -3.819 MRFAP1L1 Morf4 family associated protein 1-like 1 4 -6760335 AL566962 4p16.1 Hs.593159 Hs.695408 2    
215918_s_at -0.513 6.225 -2.304 3.572e-02 0.348 -3.819 SPTBN1 spectrin, beta, non-erythrocytic 1 2 54536957, 54639034 AA131826 2p21 Hs.503178 Hs.705692 46

actin binding

structural constituent of cytoskeleton

calmodulin binding

nucleus

nucleolus

cytoplasm

plasma membrane

common-partner SMAD protein phosphorylation

SMAD protein nuclear translocation

spectrin

cortical cytoskeleton

M band

actin filament capping

 
1569895_at 0.269 6.971 2.304 3.574e-02 0.348 -3.820 LOC100133612 similar to hCG1815312 1 3806827 BC016994 1p36.32 Hs.307652 1    
224582_s_at -0.469 7.062 -2.304 3.574e-02 0.348 -3.820 NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 1 -203948569 H09085 1q32.1 Hs.213061 Hs.652429 19

nucleus

 
228902_at -0.286 5.240 -2.304 3.575e-02 0.348 -3.820 NUP214 nucleoporin 214kDa 9 132990801 AA516455 9q34.1 Hs.654530 47

transporter activity

protein binding

nucleus

nuclear pore

cytosol

protein export from nucleus

protein transport

mRNA transport

intracellular protein transmembrane transport

 
1553672_at -0.347 3.928 -2.304 3.576e-02 0.348 -3.820 ENAH enabled homolog (Drosophila) 1 -223741156 NM_145240 1q42.12 Hs.497893 37

actin binding

cytoplasm

cytoskeleton

focal adhesion

SH3 domain binding

lamellipodium

cell junction

filopodium

synapse

intracellular transport

WW domain binding

Regulation of actin cytoskeleton

216916_s_at 0.265 4.943 2.303 3.579e-02 0.348 -3.821 DLGAP2 discs, large (Drosophila) homolog-associated protein 2 8 1436975 AF009204 8p23 Hs.113287 15

protein binding

neurofilament

plasma membrane

cell-cell signaling

nerve-nerve synaptic transmission

postsynaptic density

cell junction

synapse

postsynaptic membrane

 
205614_x_at 0.257 6.119 2.303 3.579e-02 0.348 -3.821 MST1 macrophage stimulating 1 (hepatocyte growth factor-like) 3 -49696384 NM_020998 3p21 Hs.349110 Hs.512587 31

catalytic activity

serine-type endopeptidase activity

calcium ion binding

extracellular region

proteolysis

blood coagulation

biological_process

 
207553_at 0.301 3.804 2.303 3.579e-02 0.348 -3.821 OPRK1 opioid receptor, kappa 1 8 -54300828 NM_000912 8q11.2 Hs.106795 46

receptor activity

G-protein coupled receptor activity

kappa-opioid receptor activity

protein binding

plasma membrane

integral to plasma membrane

immune response

signal transduction

G-protein coupled receptor protein signaling pathway

inhibition of adenylate cyclase activity by G-protein signaling

synaptic transmission

sensory perception

behavior

viral genome replication

Neuroactive ligand-receptor interaction

200014_s_at -0.412 9.034 -2.303 3.579e-02 0.348 -3.821 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 14 -20747135 NM_004500 14q11.2 Hs.508848 51

nucleotide binding

nuclear mRNA splicing, via spliceosome

nuclear mRNA splicing, via spliceosome

RNA binding

nucleus

spliceosomal complex

RNA splicing

identical protein binding

 
212205_at -0.439 9.711 -2.303 3.581e-02 0.348 -3.821 H2AFV H2A histone family, member V 7 -44839737, -44833012 AA534860 7p13 Hs.488189 12

nucleosome

DNA binding

nucleus

chromosome

nucleosome assembly

Systemic lupus erythematosus

205945_at -1.030 5.699 -2.303 3.581e-02 0.348 -3.821 IL6R interleukin 6 receptor 1 152644292 NM_000565 1q21 Hs.709210 132

hepatic immune response

monocyte chemotaxis

positive regulation of leukocyte chemotaxis

receptor activity

ciliary neurotrophic factor receptor activity

interleukin-6 receptor activity

receptor binding

extracellular region

plasma membrane

interleukin-6 receptor complex

acute-phase response

integral to membrane

apical plasma membrane

enzyme binding

endocrine pancreas development

endocrine pancreas development

positive regulation of chemokine production

positive regulation of interleukin-6 production

response to cytokine stimulus

positive regulation of tyrosine phosphorylation of Stat3 protein

protein homodimerization activity

regulation of apoptosis

positive regulation of osteoblast differentiation

positive regulation of anti-apoptosis

positive regulation of smooth muscle cell proliferation

positive regulation of peptidyl-tyrosine phosphorylation

defense response to Gram-negative bacterium

interleukin-6-mediated signaling pathway

ciliary neurotrophic factor binding

ciliary neurotrophic factor-mediated signaling pathway

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

Hematopoietic cell lineage

218921_at -0.303 5.578 -2.303 3.581e-02 0.348 -3.821 SIGIRR single immunoglobulin and toll-interleukin 1 receptor (TIR) domain 11 -395715, -395715 NM_021805 11p15.5 Hs.501624 13

negative regulation of cytokine-mediated signaling pathway

transmembrane receptor activity

protein binding

acute-phase response

signal transduction

membrane

integral to membrane

negative regulation of lipopolysaccharide-mediated signaling pathway

negative regulation of transcription factor activity

negative regulation of chemokine biosynthetic process

innate immune response

 
1563887_at 0.309 3.034 2.303 3.583e-02 0.348 -3.822 INTS4L1 integrator complex subunit 4-like 1 7 64239037 AK057766 7q11.21 Hs.567827 1

binding

 
202805_s_at -0.283 5.225 -2.302 3.585e-02 0.348 -3.822 ABCC1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 16 15950934 NM_004996 16p13.1 Hs.709181 163

nucleotide binding

transporter activity

ATP binding

membrane fraction

plasma membrane

integral to plasma membrane

transport

hydrolase activity

ATPase activity

response to drug

ATPase activity, coupled to transmembrane movement of substances

ABC transporters

203190_at 0.322 10.394 2.302 3.585e-02 0.348 -3.823 NDUFS8 NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) 11 67554669 NM_002496 11q13 Hs.90443 19

NADH dehydrogenase activity

iron ion binding

mitochondrion

mitochondrial respiratory chain complex I

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

transport

response to oxidative stress

NADH dehydrogenase (ubiquinone) activity

NADH dehydrogenase (ubiquinone) activity

electron carrier activity

electron transport chain

mitochondrial respiratory chain complex I assembly

metal ion binding

4 iron, 4 sulfur cluster binding

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

213945_s_at 0.231 4.118 2.302 3.587e-02 0.348 -3.823 NUP210 nucleoporin 210kDa 3 -13332736 AA909765 3p25.1 Hs.475525 24

protein binding

nucleus

nuclear pore

endoplasmic reticulum

protein transport

membrane

integral to membrane

mRNA transport

intracellular protein transmembrane transport

 
221773_at 0.579 6.858 2.302 3.587e-02 0.348 -3.823 ELK3 ELK3, ETS-domain protein (SRF accessory protein 2) 12 95112337 AW575374 12q23 Hs.46523 18

angiogenesis

transcription factor activity

transcription corepressor activity

protein binding

nucleus

nucleolus

mitochondrion

regulation of transcription, DNA-dependent

signal transduction

negative regulation of transcription

purine-rich negative regulatory element binding

wound healing

 
225844_at -0.438 7.694 -2.302 3.589e-02 0.348 -3.823 POLE4 polymerase (DNA-directed), epsilon 4 (p12 subunit) 2 75039282 NM_019896 2p12 Hs.469060 5

DNA-directed DNA polymerase activity

protein binding

intracellular

nucleus

transferase activity

nucleotidyltransferase activity

sequence-specific DNA binding

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

DNA replication

Base excision repair

Nucleotide excision repair

212824_at -0.349 6.286 -2.302 3.589e-02 0.348 -3.824 FUBP3 far upstream element (FUSE) binding protein 3 9 132444780 U69127 9q34.11-q34.12 Hs.673029 Hs.98751 6

DNA binding

RNA binding

protein binding

nucleus

transcription activator activity

regulation of transcription

 
231810_at 0.366 6.077 2.301 3.592e-02 0.348 -3.824 BRI3BP BRI3 binding protein 12 124044146 BG106919 12q24.31 Hs.596464 5

membrane

integral to membrane

 
212987_at -0.293 9.153 -2.301 3.593e-02 0.348 -3.824 FBXO9 F-box protein 9 6 53037754, 53038215, 53043729 AL031178 6p12.3-p11.2 Hs.216653 9

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein ubiquitination

modification-dependent protein catabolic process

 
206893_at 0.210 2.071 2.301 3.593e-02 0.348 -3.824 SALL1 sal-like 1 (Drosophila) 16 -49727386, -49727386 NM_002968 16q12.1 Hs.135787 29

ureteric bud development

transcription factor activity

intracellular

nucleus

zinc ion binding

anatomical structure morphogenesis

inductive cell-cell signaling

regulation of transcription

metal ion binding

 
225632_s_at 0.396 5.494 2.301 3.594e-02 0.348 -3.825 RAB43 RAB43, member RAS oncogene family 3 -130289107 BE736242 3q21.3 Hs.709807 6

nucleotide binding

GTP binding

plasma membrane

small GTPase mediated signal transduction

protein transport

 
203752_s_at -0.431 8.942 -2.301 3.594e-02 0.348 -3.825 JUND jun D proto-oncogene 19 -18251562 NM_005354 19p13.2 Hs.2780 67

chromatin

osteoblast development

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

sequence-specific DNA binding

positive regulation of osteoblast differentiation

protein dimerization activity

MAPK signaling pathway

219385_at 0.264 5.211 2.301 3.595e-02 0.348 -3.825 SLAMF8 SLAM family member 8 1 158063102 NM_020125 1q23.2 Hs.438683 9

membrane

integral to membrane

 
235339_at -0.436 4.440 -2.300 3.598e-02 0.349 -3.826 SETDB2 SET domain, bifurcated 2 13 48916429, 48923688 W65369 13q14 Hs.631789 Hs.633823 6

DNA binding

nucleus

methyltransferase activity

zinc ion binding

chromatin modification

transferase activity

histone-lysine N-methyltransferase activity

Lysine degradation

214053_at -0.909 5.754 -2.300 3.599e-02 0.349 -3.826 ERBB4 v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian) 2 -211948686 AW772192 2q33.3-q34 Hs.390729 112

nucleotide binding

transmembrane receptor protein tyrosine kinase activity

receptor activity

protein binding

ATP binding

protein amino acid phosphorylation

signal transduction

transmembrane receptor protein tyrosine kinase signaling pathway

nervous system development

heart development

cell proliferation

membrane

integral to membrane

basolateral plasma membrane

transferase activity

cell fate commitment

ErbB signaling pathway

Calcium signaling pathway

Endocytosis

212817_at -0.408 7.814 -2.300 3.600e-02 0.349 -3.826 DNAJB5 DnaJ (Hsp40) homolog, subfamily B, member 5 9 34979724, 34980266 AK023253 9p13.3 Hs.237506 5

protein folding

response to unfolded protein

heat shock protein binding

unfolded protein binding

 
218032_at -0.547 8.248 -2.300 3.602e-02 0.349 -3.827 SNN stannin 16 11669801 AF070673 16p13 Hs.700592 11

response to stress

response to abiotic stimulus

membrane

integral to membrane

 
203929_s_at -0.331 8.456 -2.300 3.602e-02 0.349 -3.827 MAPT microtubule-associated protein tau 17 41327543 AI056359 17q21.1 Hs.101174 545

microtubule cytoskeleton organization

microtubule cytoskeleton organization

structural constituent of cytoskeleton

cytoplasm

cytosol

cytoskeleton

microtubule

microtubule associated complex

plasma membrane

plasma membrane

negative regulation of microtubule depolymerization

microtubule binding

microtubule binding

lipoprotein binding

SH3 domain binding

enzyme binding

axon

axon

growth cone

growth cone

positive regulation of microtubule polymerization

positive regulation of microtubule polymerization

apolipoprotein E binding

identical protein binding

cell projection

tubulin complex

tubulin complex

positive regulation of axon extension

positive regulation of axon extension

generation of neurons

MAPK signaling pathway

Alzheimer's disease

1565756_a_at 0.316 4.369 2.300 3.602e-02 0.349 -3.827 MAP1D methionine aminopeptidase 1D 2 172573049 AA333781 2q31.1 Hs.298250 4

aminopeptidase activity

mitochondrion

proteolysis

peptidase activity

metalloexopeptidase activity

cellular process

peptidyl-methionine modification

N-terminal protein amino acid modification

metal ion binding

cobalt ion binding

 
222798_at 0.573 7.204 2.300 3.603e-02 0.349 -3.827 PTER phosphotriesterase related 10 16518972 BF112019 10p12 Hs.444321 Hs.716660 6

zinc ion binding

catabolic process

hydrolase activity, acting on ester bonds

metal ion binding

 
1552501_a_at 0.237 5.869 2.299 3.608e-02 0.349 -3.828 GPBAR1 G protein-coupled bile acid receptor 1 2 218833982 NM_170699 2q35 Hs.160954 10

receptor activity

G-protein coupled receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

integral to membrane

 
224801_at -0.444 6.695 -2.299 3.611e-02 0.349 -3.829 NDFIP2 Nedd4 family interacting protein 2 13 78953259 AI655642 13q31.1 Hs.525093 12

signal transducer activity

protein binding

cytoplasm

mitochondrion

endosome

endoplasmic reticulum

Golgi apparatus

negative regulation of gene expression

membrane

integral to membrane

positive regulation of protein ubiquitination

negative regulation of transporter activity

positive regulation of I-kappaB kinase/NF-kappaB cascade

perinuclear region of cytoplasm

WW domain binding

negative regulation of protein transport

 
203883_s_at -0.240 7.209 -2.298 3.612e-02 0.349 -3.829 RAB11FIP2 RAB11 family interacting protein 2 (class I) 10 -119754418 BG249608 10q26.11 Hs.173656 20

protein binding

endosome

plasma membrane

protein transport

Endocytosis

202084_s_at -0.434 9.391 -2.298 3.612e-02 0.349 -3.829 SEC14L1 SEC14-like 1 (S. cerevisiae) 17 72648599, 72692889 NM_003003 17q25.1-q25.2 Hs.464184 11

binding

Golgi apparatus

membrane

 
201511_at -0.229 7.540 -2.298 3.615e-02 0.349 -3.830 AAMP angio-associated, migratory cell protein 2 -218837095 NM_001087 2q35 Hs.83347 11

angiogenesis

cytoplasm

plasma membrane

multicellular organismal development

heparin binding

cell surface

positive regulation of endothelial cell migration

smooth muscle cell migration

cell differentiation

 
201336_at -0.326 9.552 -2.298 3.617e-02 0.349 -3.830 VAMP3 vesicle-associated membrane protein 3 (cellubrevin) 1 7753915 BC003570 1p36.23 Hs.66708 26

protein complex assembly

vesicle docking during exocytosis

membrane fusion

membrane

integral to membrane

synaptosome

cell junction

synapse

SNARE interactions in vesicular transport

205135_s_at -0.367 4.397 -2.298 3.618e-02 0.349 -3.830 NUFIP1 nuclear fragile X mental retardation protein interacting protein 1 13 -44411383 AL049842 13q14 Hs.525006 11

box C/D snoRNP assembly

DNA binding

intracellular

nucleus

perichromatin fibrils

nucleolus

RNA processing

transcription elongation factor complex

zinc ion binding

nuclear matrix

cytosolic ribosome

snoRNA binding

protein binding, bridging

identical protein binding

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

presynaptic active zone

pre-snoRNP complex

 
1552712_a_at 0.385 3.756 2.297 3.620e-02 0.349 -3.831 NMNAT2 nicotinamide nucleotide adenylyltransferase 2 1 -181484001, -181484001 NM_170706 1q25 Hs.497123 9

nucleotide binding

magnesium ion binding

nicotinamide-nucleotide adenylyltransferase activity

nicotinate-nucleotide adenylyltransferase activity

ATP binding

cytoplasm

Golgi apparatus

biosynthetic process

NAD biosynthetic process

transferase activity

nucleotidyltransferase activity

pyridine nucleotide biosynthetic process

Nicotinate and nicotinamide metabolism

Metabolic pathways

47083_at 0.250 7.074 2.297 3.622e-02 0.350 -3.831 C7orf26 chromosome 7 open reading frame 26 7 6596439 AI280108 7p22.1 Hs.487511 4    
219825_at 0.643 4.693 2.297 3.623e-02 0.350 -3.832 CYP26B1 cytochrome P450, family 26, subfamily B, polypeptide 1 2 -72209874 NM_019885 2p13.2 Hs.91546 11

cell fate determination

retinoic acid binding

endoplasmic reticulum

microsome

male meiosis

spermatogenesis

retinoic acid 4-hydroxylase activity

electron carrier activity

proximal/distal pattern formation

membrane

heme binding

embryonic limb morphogenesis

retinoic acid catabolic process

metal ion binding

negative regulation of retinoic acid receptor signaling pathway

oxidation reduction

Retinol metabolism

204921_at 0.291 6.965 2.297 3.624e-02 0.350 -3.832 GAS8 growth arrest-specific 8 16 88616508, 88616508 NM_001481 16q24.3 Hs.431792 7

molecular_function

protein binding

cytoplasm

Golgi apparatus

cytoskeleton

microtubule

cilium

microtubule basal body

negative regulation of cell proliferation

microtubule-based flagellum

sperm motility

 
228418_at -0.359 4.605 -2.297 3.624e-02 0.350 -3.832 EXOC5 exocyst complex component 5 14 -56738946 BF509391 14q22.3 Hs.715522 15

cytoplasm

exocytosis

post-Golgi vesicle-mediated transport

protein transport

vesicle docking

 
201590_x_at -0.642 9.579 -2.297 3.625e-02 0.350 -3.832 ANXA2 annexin A2 15 -58426642, -58426641 NM_004039 15q21-q22 Hs.511605 137

skeletal system development

angiogenesis

phospholipase inhibitor activity

calcium ion binding

calcium-dependent phospholipid binding

phosphatidylinositol-4,5-bisphosphate binding

extracellular region

basement membrane

soluble fraction

cytoplasm

early endosome

cytoskeletal protein binding

collagen fibril organization

sarcolemma

melanosome

fibrinolysis

protein complex

perinuclear region of cytoplasm

 
205421_at -1.688 5.330 -2.296 3.627e-02 0.350 -3.833 SLC22A3 solute carrier family 22 (extraneuronal monoamine transporter), member 3 6 160689414 NM_021977 6q26-q27 Hs.567337 33

transporter activity

protein binding

membrane fraction

integral to plasma membrane

ion transport

ion transmembrane transporter activity

quaternary ammonium group transmembrane transporter activity

quaternary ammonium group transport

monoamine transport

membrane

regulation of appetite

histamine uptake

 
200761_s_at -0.376 10.622 -2.296 3.631e-02 0.350 -3.834 ARL6IP5 ADP-ribosylation-like factor 6 interacting protein 5 3 69216779 NM_006407 3p14 Hs.518060 Hs.716493 30

protein binding

cytoplasm

endoplasmic reticulum

L-glutamate transport

membrane

integral to membrane

 
204888_s_at 0.338 4.686 2.295 3.633e-02 0.350 -3.834 NEURL neuralized homolog (Drosophila) 10 105243724 AA772093 10q25.1 Hs.716382 8

protein binding

cytoplasm

nervous system development

zinc ion binding

metal ion binding

perinuclear region of cytoplasm

 
221825_at -0.423 7.512 -2.295 3.633e-02 0.350 -3.834 ANGEL2 angel homolog 2 (Drosophila) 1 -211232146 AU151793 1q32.3 Hs.157078 3    
240329_at 0.277 4.539 2.295 3.635e-02 0.350 -3.835 LOC727916 hypothetical protein LOC727916 6   AW136267 6q12 Hs.706850 1    
211037_s_at 0.304 4.159 2.295 3.636e-02 0.350 -3.835 MBOAT7 membrane bound O-acyltransferase domain containing 7 19 -59373852, -59368918 BC006309 19q13.4 Hs.467279 8

acyltransferase activity

phospholipid biosynthetic process

membrane

integral to membrane

transferase activity

 
244180_at 0.291 5.480 2.295 3.636e-02 0.350 -3.835 ZNF793 zinc finger protein 793 19 42689680 AI039201 19q13.12 Hs.568010 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1563117_at 0.320 3.593 2.295 3.638e-02 0.350 -3.835 LOC388456 hypothetical gene supported by BC039671 18   BC039671 18p11.32 Hs.407666 1    
228935_at 0.241 4.055 2.295 3.639e-02 0.350 -3.835 SLC4A8 solute carrier family 4, sodium bicarbonate cotransporter, member 8 12 50104860, 50104860 AI570494 12q13.13 Hs.370636 13

transporter activity

inorganic anion exchanger activity

sodium ion transport

anion transport

anion transmembrane transporter activity

antiporter activity

membrane

integral to membrane

sodium ion binding

 
218373_at -0.373 9.125 -2.295 3.639e-02 0.350 -3.836 AKTIP AKT interacting protein 16 -52082692 NM_022476 16q12.2 Hs.380897 14

protein binding

cytoplasm

plasma membrane

apoptosis

endosome organization

lysosome organization

endosome to lysosome transport

protein transport

small conjugating protein ligase activity

HOPS complex

post-translational protein modification

early endosome to late endosome transport

regulation of protein metabolic process

FHF complex

 
238190_at -0.200 5.604 -2.294 3.640e-02 0.350 -3.836 TUFM Tu translation elongation factor, mitochondrial 16 -28761232 AI143752 16p11.2 Hs.12084 18

nucleotide binding

translation elongation factor activity

GTPase activity

protein binding

GTP binding

intracellular

mitochondrion

translational elongation

mitochondrial nucleoid

 
219999_at -0.344 6.195 -2.294 3.644e-02 0.351 -3.837 MAN2A2 mannosidase, alpha, class 2A, member 2 15 89248423 NM_018621 15q26.1 Hs.116459 20

Golgi membrane

alpha-mannosidase activity

mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity

Golgi apparatus

carbohydrate metabolic process

mannose metabolic process

metabolic process

zinc ion binding

membrane

integral to membrane

carbohydrate binding

metal ion binding

N-Glycan biosynthesis

Metabolic pathways

216678_at 0.305 6.013 2.293 3.650e-02 0.351 -3.838 IFT122 intraflagellar transport 122 homolog (Chlamydomonas) 3 130641657, 130641657 AK000773 3q21 Hs.655284 6

cytoplasm

 
1552660_a_at -0.438 5.137 -2.293 3.651e-02 0.351 -3.838 C5orf22 chromosome 5 open reading frame 22 5 31568129 BC021215 5p13.3 Hs.519246 7    
221751_at -0.345 7.366 -2.292 3.654e-02 0.351 -3.839 SLC2A3P1 solute carrier family 2 (facilitated glucose transporter), member 3 pseudogene 1 5   AL565516 5q34 Hs.388400 2    
1554828_at 0.264 3.494 2.292 3.654e-02 0.351 -3.839 PDGFRA platelet-derived growth factor receptor, alpha polypeptide 4 54790020 BC015186 4q11-q13 Hs.74615 173

nucleotide binding

in utero embryonic development

cell activation

receptor activity

platelet-derived growth factor alpha-receptor activity

vascular endothelial growth factor receptor activity

platelet-derived growth factor receptor binding

ATP binding

integral to plasma membrane

membrane

transferase activity

peptidyl-tyrosine phosphorylation

extracellular matrix organization

lung development

positive regulation of cell migration

male genitalia development

odontogenesis of dentine-containing tooth

protein homodimerization activity

positive regulation of DNA replication

protein amino acid autophosphorylation

protein heterodimerization activity

platelet-derived growth factor receptor signaling pathway

positive regulation of fibroblast proliferation

platelet-derived growth factor binding

skeletal system morphogenesis

palate development

face morphogenesis

MAPK signaling pathway

Calcium signaling pathway

Cytokine-cytokine receptor interaction

Endocytosis

Focal adhesion

Gap junction

Regulation of actin cytoskeleton

Pathways in cancer

Colorectal cancer

Glioma

Prostate cancer

Melanoma

228132_at -0.398 8.651 -2.292 3.656e-02 0.351 -3.840 ABLIM2 actin binding LIM protein family, member 2 4 -8059647, -8017936 AI240129 4p16.1 Hs.233404 9

actin binding

cytoplasm

cytoskeleton organization

zinc ion binding

actin cytoskeleton

myofibril

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

Axon guidance

237202_at 0.242 6.705 2.292 3.657e-02 0.351 -3.840 PGPEP1 pyroglutamyl-peptidase I 19 18312407 AI810572 19p13.11 Hs.131776 8

cytoplasm

proteolysis

peptidase activity

cysteine-type peptidase activity

 
217452_s_at -0.195 1.875 -2.292 3.658e-02 0.351 -3.840 B3GALT2 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 1 -191414482 Y15014 1q31 Hs.518834 Hs.716598 13

Golgi apparatus

protein amino acid glycosylation

galactosyltransferase activity

UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity

oligosaccharide biosynthetic process

membrane

integral to membrane

transferase activity, transferring glycosyl groups

manganese ion binding

Glycosphingolipid biosynthesis - lacto and neolacto series

Metabolic pathways

219319_at 0.252 5.926 2.291 3.662e-02 0.351 -3.841 HIF3A hypoxia inducible factor 3, alpha subunit 19 51492144, 51493498, 51498715 NM_022462 19q13.32 Hs.420830 12

DNA binding

signal transducer activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

signal transduction

transcription regulator activity

 
208091_s_at -0.347 8.084 -2.291 3.664e-02 0.351 -3.842 VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 7 -55505799 NM_030796 7p11.2 Hs.488307 17    
232922_s_at 0.332 5.661 2.291 3.664e-02 0.351 -3.842 SLC17A9 solute carrier family 17, member 9 20 61054443 BG419965 20q13.33 Hs.512686 7

transporter activity

transport

exocytosis

membrane

integral to membrane

 
232521_at -0.346 5.377 -2.291 3.665e-02 0.351 -3.842 PCSK7 proprotein convertase subtilisin/kexin type 7 11 -116580997 AK027156 11q23-q24 Hs.410977 Hs.648612 Hs.709588 28

serine-type endopeptidase activity

Golgi apparatus

proteolysis

peptidase activity

membrane

integral to membrane

peptide hormone processing

integral to Golgi membrane

 
203820_s_at -0.410 3.424 -2.291 3.666e-02 0.351 -3.842 IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 7 -23316352 NM_006547 7p11 Hs.700696 37

nucleotide binding

RNA binding

nucleus

cytoplasm

anatomical structure morphogenesis

negative regulation of translation

regulation of cytokine biosynthetic process

translation regulator activity

mRNA 5'-UTR binding

 
242738_s_at -0.437 6.378 -2.290 3.668e-02 0.352 -3.842 ZFHX3 zinc finger homeobox 3 16 -71374286 BG402859 16q22.3-q23.1 Hs.598297 26

negative regulation of transcription from RNA polymerase II promoter

RNA polymerase II transcription factor activity, enhancer binding

intracellular

nucleus

transcription factor complex

mitochondrion

regulation of transcription, DNA-dependent

zinc ion binding

transcription repressor activity

sequence-specific DNA binding

metal ion binding

 
204156_at -0.406 5.842 -2.290 3.668e-02 0.352 -3.843 QSK serine/threonine-protein kinase QSK 11 -116219327 AA044154 11q23.3 Hs.167451 14

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

transferase activity

 
213625_at 0.250 4.722 2.290 3.673e-02 0.352 -3.844 ZKSCAN4 zinc finger with KRAB and SCAN domains 4 6 -28320468 AW190088 6p21.33-p21.31 Hs.44720 6

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
233884_at 0.544 4.537 2.290 3.674e-02 0.352 -3.844 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 1 -41748270 AL512747 1p34 Hs.648369 Hs.715958 12

DNA binding

intracellular

nucleus

cytoplasm

zinc ion binding

transcription activator activity

positive regulation of transcription

metal ion binding

 
231745_at 0.389 4.234 2.290 3.675e-02 0.352 -3.844 GPR55 G protein-coupled receptor 55 2 -231480286 NM_005683 2q37 Hs.114545 8

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

 
225509_at -0.415 7.304 -2.289 3.675e-02 0.352 -3.844 SAP30L SAP30-like 5 153805709 AI862477 5q33.2 Hs.592566 8

nucleus

nucleolus

regulation of transcription

 
206401_s_at -0.625 7.416 -2.289 3.678e-02 0.352 -3.845 MAPT microtubule-associated protein tau 17 41327543 J03778 17q21.1 Hs.101174 545

microtubule cytoskeleton organization

microtubule cytoskeleton organization

structural constituent of cytoskeleton

cytoplasm

cytosol

cytoskeleton

microtubule

microtubule associated complex

plasma membrane

plasma membrane

negative regulation of microtubule depolymerization

microtubule binding

microtubule binding

lipoprotein binding

SH3 domain binding

enzyme binding

axon

axon

growth cone

growth cone

positive regulation of microtubule polymerization

positive regulation of microtubule polymerization

apolipoprotein E binding

identical protein binding

cell projection

tubulin complex

tubulin complex

positive regulation of axon extension

positive regulation of axon extension

generation of neurons

MAPK signaling pathway

Alzheimer's disease

1554940_a_at 0.290 4.271 2.289 3.679e-02 0.352 -3.845 LOC388882 hypothetical LOC388882 22   BC036910 22q11.23 Hs.542766 1    
204791_at -0.387 7.143 -2.289 3.679e-02 0.352 -3.845 NR2C1 nuclear receptor subfamily 2, group C, member 1 12 -93948315, -93938188 NM_003297 12q22 Hs.108301 Hs.707524 17

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

steroid hormone receptor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

transcription repressor activity

protein homodimerization activity

histone deacetylase binding

sequence-specific DNA binding

metal ion binding

 
200848_at -0.432 8.701 -2.289 3.679e-02 0.352 -3.845 AHCYL1 adenosylhomocysteinase-like 1 1 110328830 AA479488 1p13.2 Hs.705418 15

adenosylhomocysteinase activity

binding

endoplasmic reticulum

one-carbon metabolic process

metabolic process

hydrolase activity

Cysteine and methionine metabolism

Selenoamino acid metabolism

Metabolic pathways

220721_at 0.273 4.428 2.288 3.682e-02 0.352 -3.846 ZNF614 zinc finger protein 614 19 -57208389 NM_025040 19q13.41 Hs.292336 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
242548_x_at -0.416 4.813 -2.288 3.682e-02 0.352 -3.846 ANKRD37 ankyrin repeat domain 37 4 186554833 BF245661 4q35.1 Hs.508154 4

nucleus

cytoplasm

 
212716_s_at 0.243 11.408 2.288 3.683e-02 0.352 -3.846 EIF3K eukaryotic translation initiation factor 3, subunit K 19 43801561 AW083133 19q13.2 Hs.314359 15

translation initiation factor activity

translation initiation factor activity

protein binding

nucleus

cytoplasm

cytosol

eukaryotic translation initiation factor 3 complex

regulation of translational initiation

ribosome binding

 
236876_at 0.242 5.615 2.288 3.684e-02 0.352 -3.846 H1FNT H1 histone family, member N, testis-specific 12 47009029 AW013835 12q13.11 Hs.155833 3

nucleotide binding

nuclear chromatin

DNA binding

ATP binding

nucleus

chromosome

multicellular organismal development

spermatogenesis

spermatid nucleus elongation

cell differentiation

chromosome condensation

sperm chromatin condensation

 
220027_s_at 0.386 6.588 2.288 3.685e-02 0.352 -3.847 RASIP1 Ras interacting protein 1 19 -53915653 NM_017805 19q13.33 Hs.233955 4

cytoplasm

Golgi apparatus

Golgi stack

signal transduction

perinuclear region of cytoplasm

 
207973_x_at 0.286 3.444 2.288 3.686e-02 0.352 -3.847 ACRV1 acrosomal vesicle protein 1 11 -125047438 NM_020110 11q23-q24 Hs.169222 Hs.596575 12

acrosomal vesicle

multicellular organismal development

 
244413_at 0.228 3.652 2.288 3.687e-02 0.352 -3.847 CLECL1 C-type lectin-like 1 12 -9766357 AW237307 12p13.31 Hs.560087 3

binding

sugar binding

plasma membrane

integral to membrane

 
225818_s_at -0.493 5.703 -2.287 3.691e-02 0.352 -3.848 TBRG1 transforming growth factor beta regulator 1 11 123997951 BG286461 11q24.2 Hs.436410 11

DNA binding

protein binding

nucleus

DNA replication

cell cycle

cell cycle arrest

negative regulation of cell proliferation

nucleolus to nucleoplasm transport

protein stabilization

 
216968_at 0.250 5.424 2.287 3.691e-02 0.352 -3.848 MASP2 mannan-binding lectin serine peptidase 2 1 -11027441, -11009166 Y18284 1p36.3-p36.2 Hs.655645 51

complement activation, lectin pathway

complement activation, lectin pathway

serine-type endopeptidase activity

calcium ion binding

extracellular region

extracellular region

proteolysis

complement activation, classical pathway

peptidase activity

calcium-dependent protein binding

Complement and coagulation cascades

200845_s_at -0.375 10.935 -2.287 3.692e-02 0.352 -3.848 PRDX6 peroxiredoxin 6 1 171713108 NM_004905 1q25.1 Hs.120 40

phospholipase A2 activity

nucleus

cytoplasm

lysosome

cytosol

response to oxidative stress

phospholipid catabolic process

lipid catabolic process

oxidoreductase activity

hydrolase activity

cytoplasmic vesicle

cell redox homeostasis

peroxiredoxin activity

oxidation reduction

Phenylalanine metabolism

Methane metabolism

Phenylpropanoid biosynthesis

Tropane, piperidine and pyridine alkaloid biosynthesis

Biosynthesis of phenylpropanoids

Metabolic pathways

204287_at 0.282 6.299 2.287 3.693e-02 0.352 -3.848 SYNGR1 synaptogyrin 1 22 38075899, 38075899, 38090120 NM_004711 22q13.1 Hs.216226 13

integral to plasma membrane

membrane

cell junction

melanosome

synapse

 
211258_s_at 0.289 5.291 2.287 3.693e-02 0.352 -3.849 TGFA transforming growth factor, alpha 2 -70527924 AF149096 2p13 Hs.170009 117

activation of MAPK activity

angiogenesis

glycoprotein binding

MAP kinase kinase activity

signal transducer activity

extracellular region

extracellular space

plasma membrane

growth factor activity

cell proliferation

cell surface

integral to membrane

positive regulation of epidermal growth factor receptor activity

positive regulation of mitosis

positive regulation of epithelial cell proliferation

ErbB signaling pathway

Pathways in cancer

Renal cell carcinoma

Pancreatic cancer

Glioma

Prostate cancer

Non-small cell lung cancer

224782_at -0.320 8.073 -2.287 3.695e-02 0.352 -3.849 ZMAT2 zinc finger, matrin type 2 5 140060215 AA205643 5q31.3 Hs.350194 4

DNA binding

intracellular

nucleus

zinc ion binding

metal ion binding

 
219187_at -0.215 5.713 -2.287 3.696e-02 0.352 -3.849 FKBPL FK506 binding protein like 6 -32204461, -3503650 NM_022110 6p21.3 Hs.520042 7

binding

cellular_component

extracellular space

protein folding

JAK-STAT cascade

nervous system development

brain development

aging

response to radiation

basal plasma membrane

positive regulation of smooth muscle cell proliferation

advanced glycation end-product receptor activity

 
1554541_a_at 0.260 4.981 2.286 3.697e-02 0.352 -3.850 GPRIN2 G protein regulated inducer of neurite outgrowth 2 10 46413551 BC011672 10q11.22 Hs.523375 7    
218093_s_at -0.500 8.468 -2.286 3.698e-02 0.352 -3.850 ANKRD10 ankyrin repeat domain 10 13 -110328887 NM_017664 13q34 Hs.525163 2    
211570_s_at -0.363 6.748 -2.285 3.704e-02 0.353 -3.851 RAPSN receptor-associated protein of the synapse 11 -47415890 BC004196 11p11.2-p11.1 Hs.81218 32

protein binding

cytoplasm

Golgi apparatus

cytoskeleton

plasma membrane

synaptic transmission

zinc ion binding

cell junction

neuromuscular junction

acetylcholine receptor binding

postsynaptic membrane

metal ion binding

 
219014_at 0.474 4.372 2.285 3.706e-02 0.353 -3.852 PLAC8 placenta-specific 8 4 -84234330, -84230234, -84230234 NM_016619 4q21.22 Hs.546392 5    
207971_s_at -0.371 5.573 -2.285 3.706e-02 0.353 -3.852 CEP68 centrosomal protein 68kDa 2 65136998 NM_015147 2p14 Hs.709257 12

centrosome

 
1565484_x_at 0.548 6.580 2.284 3.711e-02 0.353 -3.853 EGFR epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) 7 55054218, 55054218, 55054218, 55054218 AF277897 7p12 Hs.488293 1458

nucleotide binding

cell morphogenesis

ossification

double-stranded DNA binding

MAP/ERK kinase kinase activity

transmembrane receptor activity

epidermal growth factor receptor activity

epidermal growth factor receptor activity

ATP binding

extracellular region

extracellular space

intracellular

nucleus

cytoplasm

endosome

plasma membrane

plasma membrane

response to stress

cell surface receptor linked signal transduction

epidermal growth factor receptor signaling pathway

activation of phospholipase C activity

salivary gland morphogenesis

integral to membrane

basolateral plasma membrane

cell-cell adhesion

transferase activity

protein phosphatase binding

AP-2 adaptor complex

endocytic vesicle

nitric-oxide synthase regulator activity

positive regulation of cell migration

positive regulation of cyclin-dependent protein kinase activity during G1/S

positive regulation of phosphorylation

identical protein binding

activation of phospholipase A2 activity by calcium-mediated signaling

positive regulation of MAP kinase activity

positive regulation of nitric oxide biosynthetic process

protein amino acid autophosphorylation

protein heterodimerization activity

positive regulation of epithelial cell proliferation

regulation of peptidyl-tyrosine phosphorylation

regulation of nitric-oxide synthase activity

actin filament binding

protein insertion into membrane

response to UV-A

Shc-EGFR complex

MAPK signaling pathway

ErbB signaling pathway

Calcium signaling pathway

Cytokine-cytokine receptor interaction

Endocytosis

Dorso-ventral axis formation

Focal adhesion

Adherens junction

Gap junction

Regulation of actin cytoskeleton

GnRH signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Colorectal cancer

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Bladder cancer

Non-small cell lung cancer

231958_at 0.257 5.137 2.284 3.713e-02 0.353 -3.853 C3orf31 chromosome 3 open reading frame 31 3 -11806918 AW969235 3p25.2 Hs.475472 4

mitochondrion

protein transport

protein import into mitochondrial matrix

extrinsic to mitochondrial inner membrane

 
225086_at -0.312 7.742 -2.284 3.713e-02 0.353 -3.853 FAM98B family with sequence similarity 98, member B 15 36533619, 36533619 BF679966 15q14 Hs.6799 5

protein binding

 
214985_at -0.278 3.113 -2.284 3.714e-02 0.353 -3.853 EXT1 exostoses (multiple) 1 8 -118880782 AF070571 8q24.11-q24.13 Hs.492618 53

Golgi membrane

skeletal system development

ossification

protein binding

endoplasmic reticulum

Golgi apparatus

glycosaminoglycan biosynthetic process

signal transduction

gastrulation

endoderm development

mesoderm development

heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process

membrane

integral to membrane

integral to endoplasmic reticulum membrane

heparan sulfate N-acetylglucosaminyltransferase activity

protein homodimerization activity

protein heterodimerization activity

glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity

N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity

Heparan sulfate biosynthesis

Metabolic pathways

225466_at -0.340 7.832 -2.284 3.714e-02 0.353 -3.853 PATL1 protein associated with topoisomerase II homolog 1 (yeast) 11 -59160767 BG291961 11q12.1 Hs.591960 8

cytoplasmic mRNA processing body

cytoplasm

RNA degradation

226590_at 0.362 5.294 2.284 3.715e-02 0.353 -3.854 ZNF618 zinc finger protein 618 9 115678382 AA910497 9q32 Hs.349208 2

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

protein dimerization activity

 
212203_x_at 0.445 9.583 2.284 3.716e-02 0.353 -3.854 IFITM3 interferon induced transmembrane protein 3 (1-8U) 11 -309672 BF338947 11p15.5 Hs.374650 13

plasma membrane

immune response

response to biotic stimulus

integral to membrane

 
218474_s_at -0.294 6.486 -2.284 3.716e-02 0.353 -3.854 KCTD5 potassium channel tetramerisation domain containing 5 16 2672495 NM_018992 16p13.3 Hs.61960 9

voltage-gated potassium channel activity

protein binding

nucleus

cytoplasm

potassium ion transport

voltage-gated potassium channel complex

membrane

interspecies interaction between organisms

 
203017_s_at -0.491 4.946 -2.284 3.716e-02 0.353 -3.854 SSX2IP synovial sarcoma, X breakpoint 2 interacting protein 1 -84882184 R52678 1p22.3 Hs.22587 14

protein binding

nucleus

adherens junction

cell adhesion

cell junction

protein complex

Adherens junction

228760_at -0.380 7.568 -2.284 3.717e-02 0.353 -3.854 SFRS2B splicing factor, arginine/serine-rich 2B 11 94439703 AV725947 11q22 Hs.476680 Hs.713908 6

nucleotide binding

RNA binding

nucleus

mRNA processing

RNA splicing

 
219276_x_at -0.476 6.639 -2.284 3.717e-02 0.353 -3.854 C9orf82 chromosome 9 open reading frame 82 9 -26830682 NM_024828 9p21.2 Hs.178357 10    
211520_s_at 0.204 2.247 2.283 3.718e-02 0.353 -3.854 GRIA1 glutamate receptor, ionotropic, AMPA 1 5 152850276 M64752 5q31.1 5q33 Hs.519693 58

receptor activity

ion channel activity

extracellular-glutamate-gated ion channel activity

membrane fraction

endoplasmic reticulum

plasma membrane

ion transport

signal transduction

synaptic transmission

kainate selective glutamate receptor activity

integral to membrane

cell junction

alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex

synapse

postsynaptic membrane

Neuroactive ligand-receptor interaction

Long-term potentiation

Long-term depression

Amyotrophic lateral sclerosis (ALS)

210887_s_at 0.194 5.595 2.283 3.718e-02 0.353 -3.854 EVC Ellis van Creveld syndrome 4 5763824 AF216185 4p16 Hs.646899 Hs.670028 13

skeletal system development

muscle organ development

membrane

integral to membrane

 
226523_at 0.274 6.648 2.283 3.719e-02 0.353 -3.855 TAGLN transgelin 11 116575249 AI082237 11q23.2 Hs.410977 25

actin binding

protein binding

cytoplasm

muscle organ development

 
230992_at 0.533 5.744 2.283 3.719e-02 0.353 -3.855 BTNL9 butyrophilin-like 9 5 180399830 T47960 5q35.3 Hs.546502 4

membrane

integral to membrane

 
218610_s_at -0.528 4.349 -2.283 3.720e-02 0.353 -3.855 CPPED1 calcineurin-like phosphoesterase domain containing 1 16 -12661156 NM_018340 16p13.12 Hs.460002 4

hydrolase activity

metal ion binding

 
212166_at -0.228 7.750 -2.283 3.720e-02 0.353 -3.855 XPO7 exportin 7 8 21833125, 21879694 H38643 8p21 Hs.172685 9

protein import into nucleus, docking

nuclear export signal receptor activity

nucleus

nuclear pore

cytoplasm

protein export from nucleus

protein transporter activity

mRNA transport

intracellular protein transmembrane transport

 
211028_s_at 0.267 6.022 2.283 3.721e-02 0.353 -3.855 KHK ketohexokinase (fructokinase) 2 27163114 BC006233 2p23.3 Hs.567297 20

nucleotide binding

ketohexokinase activity

protein binding

ATP binding

cytoplasm

carbohydrate metabolic process

kinase activity

transferase activity

Fructose and mannose metabolism

Metabolic pathways

217803_at -0.565 7.676 -2.283 3.724e-02 0.353 -3.856 GOLPH3 golgi phosphoprotein 3 (coat-protein) 5 -32160580 NM_022130 5p13.3 Hs.408909 6

protein binding

cytoplasm

mitochondrion

Golgi apparatus

trans-Golgi network

membrane

positive regulation of TOR signaling pathway

 
212918_at -0.355 6.481 -2.282 3.725e-02 0.353 -3.856 RECQL RecQ protein-like (DNA helicase Q1-like) 12 -21513111 AI962943 12p12 Hs.235069 29

nucleotide binding

DNA strand renaturation

DNA strand annealing activity

DNA binding

ATP-dependent DNA helicase activity

protein binding

ATP binding

nucleus

DNA repair

DNA recombination

hydrolase activity

 
200964_at -0.417 7.829 -2.282 3.725e-02 0.353 -3.856 UBA1 ubiquitin-like modifier activating enzyme 1 X 46935142, 46938144 NM_003334 Xp11.23 Hs.533273 53

nucleotide binding

protein binding

ATP binding

protein modification process

metabolic process

cell death

small protein activating enzyme activity

ligase activity

modification-dependent protein catabolic process

Ubiquitin mediated proteolysis

Parkinson's disease

221778_at -0.424 7.662 -2.282 3.725e-02 0.353 -3.856 JHDM1D jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae) 7 -139431014 BE217882 7q34 Hs.308710 3

protein binding

zinc ion binding

metal ion binding

 
212549_at -0.438 7.854 -2.282 3.729e-02 0.353 -3.857 STAT5B signal transducer and activator of transcription 5B 17 -37604720 BE645861 17q11.2 Hs.719121 128

allantoin metabolic process

luteinization

natural killer cell differentiation

transcription factor activity

signal transducer activity

calcium ion binding

protein binding

nucleus

cytoplasm

citrate metabolic process

2-oxoglutarate metabolic process

succinate metabolic process

oxaloacetate metabolic process

isoleucine metabolic process

valine metabolic process

creatine metabolic process

fatty acid metabolic process

signal transduction

female pregnancy

lactation

positive regulation of cell proliferation

regulation of steroid metabolic process

cytokine-mediated signaling pathway

taurine metabolic process

lipid storage

regulation of cell adhesion

regulation of epithelial cell differentiation

response to estradiol stimulus

cellular response to hormone stimulus

T cell differentiation in the thymus

glucocorticoid receptor binding

positive regulation of multicellular organism growth

positive regulation of activated T cell proliferation

progesterone metabolic process

T cell homeostasis

negative regulation of apoptosis

positive regulation of interleukin-2 biosynthetic process

positive regulation of B cell differentiation

positive regulation of gamma-delta T cell differentiation

negative regulation of erythrocyte differentiation

positive regulation of survival gene product expression

positive regulation of mitotic cell cycle

positive regulation of transcription from RNA polymerase II promoter

creatinine metabolic process

development of secondary female sexual characteristics

development of secondary male sexual characteristics

Peyer's patch development

positive regulation of inflammatory response

JAK-STAT cascade involved in growth hormone signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

Jak-STAT signaling pathway

Pathways in cancer

Chronic myeloid leukemia

Acute myeloid leukemia

223853_at -0.478 4.122 -2.282 3.729e-02 0.353 -3.857 BVES blood vessel epicardial substance 6 -105651391, -105651391 AF204172 6q21 Hs.221660 6

muscle organ development

membrane

integral to membrane

 
1552293_at 0.277 4.680 2.282 3.731e-02 0.353 -3.857 TMEM196 transmembrane protein 196 7 -19725463 NM_152774 7p21.1 Hs.487670 1

membrane

integral to membrane

 
238461_at -0.933 5.652 -2.281 3.735e-02 0.354 -3.858 EIF4E3 eukaryotic translation initiation factor 4E family member 3 3 -71811131, -71811131, -71811131, -71811131 AA228031 3p14 Hs.581355 3

RNA binding

translation initiation factor activity

cytoplasm

translational initiation

regulation of translation

 
201242_s_at -0.498 11.096 -2.281 3.737e-02 0.354 -3.859 ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 1 167342570 BC000006 1q24 Hs.291196 34

response to hypoxia

sodium:potassium-exchanging ATPase activity

protein binding

plasma membrane

sodium:potassium-exchanging ATPase complex

ATP biosynthetic process

ion transport

potassium ion transport

sodium ion transport

integral to membrane

basolateral plasma membrane

potassium ion binding

sodium ion binding

Cardiac muscle contraction

236133_x_at 0.358 2.393 2.281 3.739e-02 0.354 -3.859 ZNF254 zinc finger protein 254 19 24061815 AI983886 19p12 Hs.434406 5

negative regulation of transcription from RNA polymerase II promoter

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
235050_at 0.349 3.728 2.280 3.739e-02 0.354 -3.859 SLC2A12 solute carrier family 2 (facilitated glucose transporter), member 12 6 -134350411 AI742872 6q23.2 Hs.486508 11

transporter activity

cytoplasm

carbohydrate transport

membrane

integral to membrane

substrate-specific transmembrane transporter activity

perinuclear region of cytoplasm

transmembrane transport

 
219662_at -0.481 6.611 -2.280 3.740e-02 0.354 -3.860 C2orf49 chromosome 2 open reading frame 49 2 105320444 NM_024093 2q12.1 Hs.549577 4

molecular_function

cellular_component

biological_process

 
209608_s_at 0.244 5.580 2.280 3.741e-02 0.354 -3.860 ACAT2 acetyl-Coenzyme A acetyltransferase 2 6 160102978 BC000408 6q25.3 Hs.571037 26

acetyl-CoA C-acetyltransferase activity

protein binding

cytoplasm

lipid metabolic process

metabolic process

acyltransferase activity

transferase activity

Fatty acid metabolism

Synthesis and degradation of ketone bodies

Valine, leucine and isoleucine degradation

Lysine degradation

Tryptophan metabolism

Pyruvate metabolism

Benzoate degradation via CoA ligation

Propanoate metabolism

Butanoate metabolism

Terpenoid backbone biosynthesis

Metabolic pathways

218349_s_at -0.310 4.154 -2.280 3.741e-02 0.354 -3.860 ZWILCH Zwilch, kinetochore associated, homolog (Drosophila) 15 64584484 NM_017975 15q22.31 Hs.21331 5

condensed chromosome kinetochore

protein binding

cell cycle

mitosis

mitotic cell cycle checkpoint

cell division

 
237251_at 0.305 4.596 2.280 3.743e-02 0.354 -3.860 C1orf92 chromosome 1 open reading frame 92 1 155157047 AI480252 1q23.1 Hs.491734 3    
221865_at -0.283 5.094 -2.280 3.743e-02 0.354 -3.860 C9orf91 chromosome 9 open reading frame 91 9 116413526 BF969986 9q32 Hs.522357 9

membrane

integral to membrane

 
216544_at 0.268 3.181 2.280 3.746e-02 0.354 -3.861 RBMY2FP RNA binding motif protein, Y-linked, family 2, member F pseudogene Y 22864393 AC007320 Yq11.223 Hs.684794 Hs.711527 3    
239307_at 0.221 4.581 2.279 3.747e-02 0.354 -3.861 MYH11 myosin, heavy chain 11, smooth muscle 16 -15704492 AA781173 16p13.11 Hs.460109 33

nucleotide binding

motor activity

actin binding

calmodulin binding

ATP binding

striated muscle thick filament

smooth muscle contraction

striated muscle contraction

structural constituent of muscle

myosin complex

muscle thick filament assembly

melanosome

elastic fiber assembly

cardiac muscle fiber development

Vascular smooth muscle contraction

Tight junction

230560_at 0.420 5.350 2.279 3.747e-02 0.354 -3.861 STXBP6 syntaxin binding protein 6 (amisyn) 14 -24351143 N21096 14q12 Hs.508958 6

cytoplasm

membrane

integral to membrane

vesicle-mediated transport

 
220311_at -0.378 4.626 -2.279 3.748e-02 0.354 -3.861 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 (putative) 21 -29166383 NM_013240 21q21.3 Hs.163846 6

nucleic acid binding

protein binding

protein methyltransferase activity

transferase activity

positive regulation of cell growth

methylation

protein complex

 
226996_at -0.374 6.769 -2.279 3.749e-02 0.354 -3.862 LCLAT1 lysocardiolipin acyltransferase 1 2 30523626, 30523640 AV717041 2p23.1 Hs.468048 Hs.662770 8

1-acylglycerol-3-phosphate O-acyltransferase activity

endoplasmic reticulum

multicellular organismal development

metabolic process

acyltransferase activity

phospholipid biosynthetic process

membrane

integral to membrane

transferase activity

Tyrosine metabolism

Phenylalanine metabolism

Glycerolipid metabolism

Glycerophospholipid metabolism

Ether lipid metabolism

1- and 2-Methylnaphthalene degradation

Benzoate degradation via CoA ligation

Limonene and pinene degradation

Metabolic pathways

209438_at 0.438 5.146 2.279 3.749e-02 0.354 -3.862 PHKA2 phosphorylase kinase, alpha 2 (liver) X -18820336 AL096700 Xp22.2-p22.1 Hs.54941 Hs.607628 Hs.622882 29

catalytic activity

phosphorylase kinase activity

calmodulin binding

plasma membrane

phosphorylase kinase complex

carbohydrate metabolic process

glycogen metabolic process

generation of precursor metabolites and energy

protein modification process

Calcium signaling pathway

Insulin signaling pathway

223297_at -0.422 7.139 -2.279 3.751e-02 0.354 -3.862 AMMECR1L AMME chromosomal region gene 1-like 2 -128335675 BC004208 2q21 Hs.546449 3    
228017_s_at 0.267 4.657 2.279 3.752e-02 0.354 -3.862 NKAIN4 Na+/K+ transporting ATPase interacting 4 20 -61342581 BF593263 20q13.33 Hs.46627 7

plasma membrane

integral to membrane

 
216537_s_at 0.301 5.164 2.279 3.753e-02 0.354 -3.863 SIGLEC7 sialic acid binding Ig-like lectin 7 19 56337369 AJ130713 19q13.3 Hs.655393 20

receptor activity

protein binding

sugar binding

integral to plasma membrane

cell adhesion

membrane

 
1554167_a_at -0.554 7.156 -2.278 3.756e-02 0.354 -3.863 GOLGA7 golgi autoantigen, golgin subfamily a, 7 8 41467237, 41467329 BC012032 8p11.21 Hs.654773 7

Golgi apparatus

membrane

 
226905_at 0.490 7.645 2.278 3.758e-02 0.354 -3.864 FAM101B family with sequence similarity 101, member B 17 -289998 BG036514 17p13 Hs.345588 Hs.596411 Hs.719324 4    
216976_s_at -0.445 5.278 -2.277 3.762e-02 0.355 -3.865 RYK RYK receptor-like tyrosine kinase 3 -135358667 X96588 3q22 Hs.654562 13

nucleotide binding

transmembrane receptor protein tyrosine kinase activity

receptor activity

ATP binding

membrane fraction

plasma membrane

integral to plasma membrane

protein amino acid phosphorylation

signal transduction

axonogenesis

transferase activity

Wnt-protein binding

Wnt receptor activity

skeletal system morphogenesis

 
205181_at 0.337 6.308 2.277 3.764e-02 0.355 -3.865 ZNF193 zinc finger protein 193 6 28301051 NM_006299 6p21.3 Hs.100921 8

transcription factor activity

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
226878_at 0.304 5.212 2.277 3.765e-02 0.355 -3.866 HLA-DOA major histocompatibility complex, class II, DO alpha 6 -33079937, -4352783, -4157999 AL581873 6p21.3 Hs.631991 40

antigen processing and presentation of peptide or polysaccharide antigen via MHC class II

plasma membrane

plasma membrane

immune response

integral to membrane

antigen processing and presentation of exogenous peptide antigen via MHC class II

MHC class II receptor activity

MHC class II protein complex

regulation of T cell differentiation

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

210115_at 0.413 4.086 2.277 3.766e-02 0.355 -3.866 RPL39L ribosomal protein L39-like 3 -188321434 L05096 3q27 Hs.647900 4

structural constituent of ribosome

intracellular

ribosome

translation

spermatogenesis

cytosolic large ribosomal subunit

 
205976_at -0.355 3.645 -2.277 3.768e-02 0.355 -3.866 FASTKD2 FAST kinase domains 2 2 207338356 NM_014929 2q33.3 Hs.5930 8

protein kinase activity

ATP binding

apoptosis

 
223321_s_at 0.217 6.496 2.276 3.770e-02 0.355 -3.867 FGFRL1 fibroblast growth factor receptor-like 1 4 995609, 995759, 996251 AF312678 4p16 Hs.193326 15

regulation of cell growth

receptor activity

fibroblast growth factor receptor activity

protein binding

plasma membrane

negative regulation of cell proliferation

integral to membrane

 
217985_s_at -0.396 5.505 -2.276 3.771e-02 0.355 -3.867 BAZ1A bromodomain adjacent to zinc finger domain, 1A 14 -34291687 AA102574 14q12-q13 Hs.509140 12

protein binding

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
203485_at -0.411 5.012 -2.276 3.773e-02 0.355 -3.867 RTN1 reticulon 1 14 -59132446, -59132446, -59132446 NM_021136 14q23.1 Hs.368626 23

signal transducer activity

endoplasmic reticulum

signal transduction

membrane

integral to membrane

integral to endoplasmic reticulum membrane

neuron differentiation

 
209683_at -0.411 5.220 -2.276 3.776e-02 0.355 -3.868 FAM49A family with sequence similarity 49, member A 2 -16597381 AA243659 2p24.2 Hs.467769 8

intracellular

 
213870_at 0.320 5.566 2.275 3.776e-02 0.355 -3.868 COL11A2 collagen, type XI, alpha 2 6 -33262201, -33238446, -4534386, -4510632, -4340391, -4316638 AL031228 6p21.3 Hs.390171 39

extracellular region

collagen

collagen type XI

cell adhesion

sensory perception of sound

extracellular matrix structural constituent conferring tensile strength

collagen fibril organization

protein binding, bridging

cartilage development

soft palate development

Focal adhesion

ECM-receptor interaction

244623_at -1.305 7.440 -2.275 3.776e-02 0.355 -3.868 KCNQ5 potassium voltage-gated channel, KQT-like subfamily, member 5 6 73388291 BF513800 6q14 Hs.445324 Hs.675919 15

inward rectifier potassium channel activity

voltage-gated ion channel activity

protein complex assembly

ion transport

potassium ion transport

synaptic transmission

voltage-gated potassium channel complex

membrane

integral to membrane

potassium ion binding

 
236263_at 0.197 4.809 2.275 3.777e-02 0.355 -3.868 SHH sonic hedgehog homolog (Drosophila) 7 -155288318 AI192528 7q36 Hs.164537 144

patterning of blood vessels

vasculogenesis

metanephros development

branching involved in ureteric bud morphogenesis

cell fate specification

neural crest cell migration

neural tube formation

positive regulation of neuroblast proliferation

positive regulation of mesenchymal cell proliferation

osteoblast development

patched binding

protein binding

extracellular region

extracellular space

plasma membrane

signal transduction

positive regulation of hh target transcription factor activity

cell-cell signaling

pattern specification process

axon guidance

ventral midline development

open tracheal system development

salivary gland morphogenesis

hindgut morphogenesis

heart development

blood coagulation

androgen metabolic process

peptidase activity

anterior/posterior pattern formation

cell surface

oligodendrocyte development

intein-mediated protein splicing

spinal cord dorsal/ventral patterning

dorsal/ventral neural tube patterning

smoothened signaling pathway involved in regulation of granule cell precursor cell proliferation

positive regulation of granule cell precursor proliferation

telencephalon regionalization

regulation of proteolysis

lung development

negative regulation of cell migration

male genitalia development

prostate gland development

regulation of epithelial cell differentiation

forebrain development

midbrain development

hindbrain development

hair follicle morphogenesis

negative regulation of proteasomal ubiquitin-dependent protein catabolic process

negative regulation of T cell proliferation

negative regulation of protein catabolic process

positive regulation of protein import into nucleus

odontogenesis of dentine-containing tooth

embryonic digit morphogenesis

camera-type eye development

laminin-1 binding

tongue morphogenesis

membrane raft

myoblast differentiation

regulation of transcription

negative regulation of cell differentiation

positive regulation of neuron differentiation

positive regulation of transcription from RNA polymerase II promoter

negative regulation of alpha-beta T cell differentiation

digestive tract morphogenesis

embryonic organ development

developmental growth

neuron fate commitment

response to axon injury

embryonic skeletal system development

formation of anatomical boundary

striated muscle cell differentiation

Bergmann glial cell differentiation

Hedgehog signaling pathway

Pathways in cancer

Basal cell carcinoma

210820_x_at -0.259 6.603 -2.275 3.778e-02 0.355 -3.868 COQ7 coenzyme Q7 homolog, ubiquinone (yeast) 16 18986427 AL136647 16p13.11-p12.3 Hs.157113 18

iron ion binding

nucleus

mitochondrion

ubiquinone biosynthetic process

oxidoreductase activity

protein metabolic process

Ubiquinone and other terpenoid-quinone biosynthesis

Metabolic pathways

225144_at -0.407 7.620 -2.275 3.778e-02 0.355 -3.869 BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 2 202949294 AI457436 2q33-q34 Hs.471119 106

nucleotide binding

magnesium ion binding

mesoderm formation

negative regulation of systemic arterial blood pressure

protein serine/threonine kinase activity

receptor activity

transforming growth factor beta receptor activity

protein binding

ATP binding

plasma membrane

plasma membrane

integral to plasma membrane

caveola

transcription from RNA polymerase II promoter

protein amino acid phosphorylation

cellular response to starvation

anterior/posterior pattern formation

regulation of lung blood pressure

regulation of lung blood pressure

transferase activity

manganese ion binding

positive regulation of bone mineralization

BMP signaling pathway

BMP signaling pathway

BMP signaling pathway

BMP signaling pathway

regulation of cell proliferation

positive regulation of osteoblast differentiation

negative regulation of vasoconstriction

vascular endothelial growth factor receptor signaling pathway

lung alveolus development

Cytokine-cytokine receptor interaction

TGF-beta signaling pathway

206177_s_at 0.344 3.265 2.275 3.779e-02 0.355 -3.869 ARG1 arginase, liver 6 131936057 NM_000045 6q23 Hs.440934 44

urea cycle

arginase activity

cytoplasm

arginine catabolic process

hydrolase activity

manganese ion binding

metal ion binding

Arginine and proline metabolism

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Metabolic pathways

218996_at -0.375 6.638 -2.275 3.780e-02 0.355 -3.869 TFPT TCF3 (E2A) fusion partner (in childhood Leukemia) 19 -59302131 NM_013342 19q13 Hs.590939 9

protein binding

nucleus

 
224203_at 0.308 5.686 2.275 3.780e-02 0.355 -3.869 SUFU suppressor of fused homolog (Drosophila) 10 104253753 AF222345 10q24.32 Hs.404089 22

skeletal system development

transcription corepressor activity

signal transducer activity

nucleus

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

proteolysis

signal transduction

multicellular organismal development

identical protein binding

Hedgehog signaling pathway

Pathways in cancer

Basal cell carcinoma

220133_at 0.296 2.957 2.275 3.783e-02 0.355 -3.870 ODAM odontogenic, ameloblast asssociated 4 71096832 NM_017855 4q13.3 Hs.143811 11

extracellular region

biomineral formation

odontogenesis of dentine-containing tooth

 
214905_at 0.246 5.220 2.274 3.783e-02 0.355 -3.870 RASGRF1 Ras protein-specific guanine nucleotide-releasing factor 1 15 -77039345, -77039345 AL109674 15q24.2 Hs.459035 24

Rho guanyl-nucleotide exchange factor activity

protein binding

intracellular

cytosol

plasma membrane

long-term memory

synaptosome

growth cone

neuron projection development

positive regulation of Ras GTPase activity

activation of Rac GTPase activity

regulation of Rac protein signal transduction

regulation of Rho protein signal transduction

MAPK signaling pathway

Focal adhesion

217001_x_at 0.265 5.691 2.274 3.784e-02 0.355 -3.870 HLA-DOA major histocompatibility complex, class II, DO alpha 6 -33079937, -4352783, -4157999 M29335 6p21.3 Hs.631991 40

antigen processing and presentation of peptide or polysaccharide antigen via MHC class II

plasma membrane

plasma membrane

immune response

integral to membrane

antigen processing and presentation of exogenous peptide antigen via MHC class II

MHC class II receptor activity

MHC class II protein complex

regulation of T cell differentiation

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

200979_at 0.867 7.231 2.274 3.785e-02 0.355 -3.870 PDHA1 pyruvate dehydrogenase (lipoamide) alpha 1 X 19271931 BF739979 Xp22.2-p22.1 Hs.530331 54

pyruvate dehydrogenase (acetyl-transferring) activity

protein binding

mitochondrion

mitochondrial matrix

glycolysis

oxidoreductase activity

oxidation reduction

Glycolysis / Gluconeogenesis

Citrate cycle (TCA cycle)

Valine, leucine and isoleucine biosynthesis

Pyruvate metabolism

Butanoate metabolism

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

227371_at 0.270 4.539 2.274 3.788e-02 0.355 -3.871 BAIAP2L1 BAI1-associated protein 2-like 1 7 -97758903 AA496034 7q21.3-q22.1 Hs.656063 Hs.710371 13

molecular_function

actin binding

cellular_component

signal transduction

cytoskeletal adaptor activity

biological_process

SH3 domain binding

filopodium assembly

 
205530_at 0.600 8.456 2.274 3.788e-02 0.355 -3.871 ETFDH electron-transferring-flavoprotein dehydrogenase 4 159812726 NM_004453 4q32-q35 Hs.155729 16

electron-transferring-flavoprotein dehydrogenase activity

iron ion binding

mitochondrion

mitochondrial inner membrane

fatty acid beta-oxidation

transport

response to oxidative stress

electron carrier activity

membrane

integral to membrane

oxidoreductase activity

electron transport chain

integral to mitochondrial inner membrane

oxidoreductase activity, oxidizing metal ions with flavin as acceptor

metal ion binding

ubiquinone binding

FAD binding

4 iron, 4 sulfur cluster binding

 
222126_at 0.223 5.403 2.273 3.792e-02 0.356 -3.872 AGFG2 ArfGAP with FG repeats 2 7 99974769 AI247494 7q22.1 Hs.521083 9

molecular_function

cellular_component

ARF GTPase activator activity

biological_process

zinc ion binding

regulation of ARF GTPase activity

metal ion binding

 
236208_at -0.587 6.332 -2.273 3.793e-02 0.356 -3.872 MOCS2 molybdenum cofactor synthesis 2 5 -52429651, -52429651 BE467697 5q11 Hs.163645 17

cytoplasm

cytosol

Mo-molybdopterin cofactor biosynthetic process

Mo-molybdopterin cofactor biosynthetic process

sulfur metabolic process

molybdopterin synthase complex

molybdopterin synthase complex

Mo-molybdopterin synthase activity

identical protein binding

 
212639_x_at -0.597 10.322 -2.273 3.793e-02 0.356 -3.872 TUBA1B tubulin, alpha 1b 12 -47807832 AL581768 12q13.12 Hs.524390 Hs.719075 42

nucleotide binding

microtubule cytoskeleton organization

GTPase activity

structural constituent of cytoskeleton

protein binding

GTP binding

microtubule

microtubule-based movement

protein complex

protein polymerization

Gap junction

Pathogenic Escherichia coli infection - EHEC

214352_s_at -0.517 6.135 -2.273 3.796e-02 0.356 -3.873 KRAS v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog 12 -25249446 BF673699 12p12.1 Hs.505033 430

nucleotide binding

protein binding

GTP binding

intracellular

membrane fraction

plasma membrane

plasma membrane

endocytosis

Ras protein signal transduction

cell aging

positive regulation of cell proliferation

visual learning

actin cytoskeleton organization

regulation of synaptic transmission, GABAergic

positive regulation of Rac protein signal transduction

negative regulation of neuron apoptosis

regulation of long-term neuronal synaptic plasticity

striated muscle cell differentiation

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

Dorso-ventral axis formation

Axon guidance

VEGF signaling pathway

Tight junction

Gap junction

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Long-term potentiation

Neurotrophin signaling pathway

Long-term depression

Regulation of actin cytoskeleton

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Thyroid cancer

Melanoma

Bladder cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Non-small cell lung cancer

224187_x_at -0.504 11.726 -2.273 3.796e-02 0.356 -3.873 HSPA8 heat shock 70kDa protein 8 11 -122433409 AF217511 11q24.1 Hs.702021 145

nucleotide binding

protein binding

ATP binding

intracellular

cytoplasm

protein folding

response to unfolded protein

cell surface

melanosome

ATPase activity, coupled

interspecies interaction between organisms

MAPK signaling pathway

Endocytosis

Antigen processing and presentation

48808_at -0.822 6.165 -2.273 3.796e-02 0.356 -3.873 DHFR dihydrofolate reductase 5 -79957800 AI144299 5q11.2-q13.2 Hs.592364 Hs.648635 80

dihydrofolate reductase activity

cellular_component

glycine biosynthetic process

one-carbon metabolic process

nucleotide biosynthetic process

oxidoreductase activity

NADP or NADPH binding

oxidation reduction

One carbon pool by folate

Folate biosynthesis

Biosynthesis of phenylpropanoids

Metabolic pathways

212232_at -0.547 8.111 -2.272 3.802e-02 0.356 -3.874 FNBP4 formin binding protein 4 11 -47694644 AB023231 11p11.2 Hs.6834 11

protein binding

 
208480_s_at -0.286 4.391 -2.271 3.805e-02 0.356 -3.875 ABCC6 ATP-binding cassette, sub-family C (CFTR/MRP), member 6 16 -16222544, -16150922 NM_001171 16p13.1 Hs.442182 70

nucleotide binding

transporter activity

ATP binding

plasma membrane

transport

visual perception

integral to membrane

ATPase activity

response to drug

ATPase activity, coupled to transmembrane movement of substances

response to stimulus

ABC transporters

225195_at -0.498 6.934 -2.271 3.806e-02 0.356 -3.875 DPH3 DPH3, KTI11 homolog (S. cerevisiae) 3 -16273572 AI825858 3p25.1 Hs.388087 8

protein binding

nucleus

cytoplasm

zinc ion binding

peptidyl-diphthamide biosynthetic process from peptidyl-histidine

metal ion binding

negative regulation of protein secretion

positive regulation of binding

 
221486_at -0.460 9.846 -2.271 3.806e-02 0.356 -3.875 ENSA endosulfine alpha 1 -148866145, -148862377, -148862377, -148861222, -148861222 AF067170 1q21.3 Hs.632456 15

receptor binding

cytoplasm

transport

response to nutrient

ion channel inhibitor activity

 
202158_s_at -0.435 6.014 -2.271 3.806e-02 0.356 -3.875 CUGBP2 CUG triplet repeat, RNA binding protein 2 10 11087264, 11099898, 11246998 NM_006561 10p13 Hs.309288 25

nucleotide binding

RNA binding

protein binding

nucleus

cytoplasm

mRNA processing

regulation of heart contraction

 
215646_s_at -0.478 4.172 -2.271 3.807e-02 0.356 -3.875 VCAN versican 5 82803248 R94644 5q14.3 Hs.643801 Hs.715773 74

binding

calcium ion binding

sugar binding

hyaluronic acid binding

extracellular region

proteinaceous extracellular matrix

cell adhesion

multicellular organismal development

cell recognition

Cell adhesion molecules (CAMs)

242006_at -0.313 3.691 -2.271 3.807e-02 0.356 -3.875 LCA5 Leber congenital amaurosis 5 6 -80251426, -80251426 AI379143 6q14.1 Hs.21945 10

cytoplasm

cytoskeleton

cilium

microtubule basal body

protein transport

cilium axoneme

 
210137_s_at -0.349 7.163 -2.271 3.809e-02 0.356 -3.876 DCTD dCMP deaminase 4 -184048237 BC001286 4q35.1 Hs.183850 9

dCMP deaminase activity

dCMP deaminase activity

cytosol

pyrimidine nucleotide metabolic process

zinc ion binding

nucleotide biosynthetic process

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds

metal ion binding

Pyrimidine metabolism

Metabolic pathways

228550_at 0.289 5.165 2.271 3.809e-02 0.356 -3.876 RTN4R reticulon 4 receptor 22 -18608937 NM_023004 22q11.21 Hs.30868 40

receptor activity

protein binding

endoplasmic reticulum

plasma membrane

axonogenesis

anchored to membrane

 
218859_s_at -0.311 7.584 -2.271 3.809e-02 0.356 -3.876 ESF1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) 20 -13642968 NM_016649 20p12.1 Hs.369284 10

nucleus

nucleoplasm

nucleolus

regulation of transcription

 
224443_at 0.712 6.229 2.270 3.812e-02 0.356 -3.876 C1orf97 chromosome 1 open reading frame 97 1 209622719 BC005997 1q32.3 Hs.523932 4    
224525_s_at -0.756 5.580 -2.270 3.812e-02 0.356 -3.876 OLA1 Obg-like ATPase 1 2 -174645420 AL136546 2q31.1 Hs.157351 11

nucleotide binding

protein binding

ATP binding

GTP binding

intracellular

cytoplasm

ATP catabolic process

hydrolase activity

 
214684_at -0.367 6.892 -2.270 3.813e-02 0.356 -3.877 MEF2A myocyte enhancer factor 2A 15 97923655, 97990705 X63381 15q26 Hs.268675 77

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

apoptosis

multicellular organismal development

nervous system development

muscle organ development

cell differentiation

sequence-specific DNA binding

 
242851_at 0.331 5.626 2.270 3.814e-02 0.356 -3.877 KIAA1919 KIAA1919 6 111687174 BE964989 6q22 Hs.400572 5

plasma membrane

ion transport

sodium ion transport

carbohydrate transport

symporter activity

integral to membrane

sodium ion binding

 
44673_at 0.235 6.216 2.270 3.817e-02 0.357 -3.878 SIGLEC1 sialic acid binding Ig-like lectin 1, sialoadhesin 20 -3615616 N53555 20p13 Hs.31869 13

protein binding

sugar binding

extracellular region

plasma membrane

inflammatory response

cell-matrix adhesion

integral to membrane

cell-cell adhesion

Cell adhesion molecules (CAMs)

206671_at 0.294 4.500 2.270 3.818e-02 0.357 -3.878 SAG S-antigen; retina and pineal gland (arrestin) 2 233881047 NM_000541 2q37.1 Hs.32721 25

phosphoprotein phosphatase inhibitor activity

calcium ion binding

protein binding

cell surface receptor linked signal transduction

sensory perception

visual perception

rhodopsin mediated phototransduction

rhodopsin mediated signaling pathway

response to stimulus

 
201037_at -0.606 6.504 -2.269 3.822e-02 0.357 -3.879 PFKP phosphofructokinase, platelet 10 3099751 NM_002627 10p15.3-p15.2 Hs.26010 24

nucleotide binding

magnesium ion binding

6-phosphofructokinase activity

6-phosphofructokinase activity

protein binding

ATP binding

cytoplasm

cytosol

cytosol

6-phosphofructokinase complex

glycolysis

kinase activity

transferase activity

Glycolysis / Gluconeogenesis

Pentose phosphate pathway

Fructose and mannose metabolism

Galactose metabolism

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

210746_s_at 0.188 3.885 2.269 3.823e-02 0.357 -3.879 EPB42 erythrocyte membrane protein band 4.2 15 -41276717 M30646 15q15-q21 Hs.368642 34

cell morphogenesis

protein-glutamine gamma-glutamyltransferase activity

structural constituent of cytoskeleton

protein binding

ATP binding

cytoplasm

plasma membrane

regulation of cell shape

peptide cross-linking

hemoglobin metabolic process

cortical cytoskeleton

erythrocyte maturation

spleen development

ion homeostasis

iron ion homeostasis

 
200910_at -0.304 8.930 -2.269 3.823e-02 0.357 -3.879 CCT3 chaperonin containing TCP1, subunit 3 (gamma) 1 -154545375 NM_005998 1q23 Hs.491494 19

nucleotide binding

ATP binding

nucleus

cytoplasm

cytoskeleton

plasma membrane

protein folding

unfolded protein binding

 
1560060_s_at -0.377 8.207 -2.269 3.823e-02 0.357 -3.879 VPS37C vacuolar protein sorting 37 homolog C (S. cerevisiae) 11 -60654303 BM452172 11q12.2 Hs.523715 3

endosome

protein transport

membrane

Endocytosis

217493_x_at 0.239 6.329 2.269 3.825e-02 0.357 -3.879 NCR2 natural cytotoxicity triggering receptor 2 6 41411505 AL136967 6p21.1 Hs.194721 16

transmembrane receptor activity

plasma membrane

integral to plasma membrane

cellular defense response

signal transduction

Natural killer cell mediated cytotoxicity

236223_s_at 0.192 2.430 2.268 3.827e-02 0.357 -3.880 RIT1 Ras-like without CAAX 1 1 -154134224 AL037450 1q22 Hs.491234 17

nucleotide binding

calmodulin binding

GTP binding

intracellular

plasma membrane

signal transduction

small GTPase mediated signal transduction

small GTPase mediated signal transduction

 
223239_at -0.659 6.880 -2.268 3.830e-02 0.357 -3.880 C14orf129 chromosome 14 open reading frame 129 14 95915774 BC004818 14q32.2 Hs.715512 7

protein binding

cytoplasm

 
1552542_s_at 0.296 3.542 2.268 3.830e-02 0.357 -3.880 TAGAP T-cell activation RhoGTPase activating protein 6 -159379931, -159376014 NM_138810 6q25.3 Hs.529984 11

guanyl-nucleotide exchange factor activity

intracellular

signal transduction

 
214853_s_at -0.258 8.396 -2.268 3.831e-02 0.357 -3.881 SHC1 SHC (Src homology 2 domain containing) transforming protein 1 1 -153201397, -153201397 AI091079 1q21 Hs.433795 255

activation of MAPK activity

transmembrane receptor protein tyrosine kinase adaptor protein activity

epidermal growth factor receptor binding

insulin receptor binding

insulin-like growth factor receptor binding

protein binding

phospholipid binding

cytoplasm

mitochondrion

cytosol

plasma membrane

epidermal growth factor receptor signaling pathway

regulation of epidermal growth factor receptor activity

intracellular signaling cascade

Ras protein signal transduction

positive regulation of cell proliferation

insulin receptor signaling pathway

regulation of growth

positive regulation of DNA replication

Shc-EGFR complex

ErbB signaling pathway

Chemokine signaling pathway

Focal adhesion

Natural killer cell mediated cytotoxicity

Neurotrophin signaling pathway

Insulin signaling pathway

Glioma

Chronic myeloid leukemia

200642_at -0.294 11.065 -2.268 3.832e-02 0.357 -3.881 SOD1 superoxide dismutase 1, soluble 21 31953805 NM_000454 21q22.1 21q22.11 Hs.443914 450

activation of MAPK activity

response to superoxide

ovarian follicle development

positive regulation of cytokine production

placenta development

retina homeostasis

myeloid cell homeostasis

superoxide dismutase activity

copper ion binding

extracellular space

nucleus

cytoplasm

mitochondrion

mitochondrial matrix

peroxisome

cytosol

plasma membrane

double-strand break repair

DNA fragmentation involved in apoptosis

glutathione metabolic process

cellular iron ion homeostasis

anti-apoptosis

spermatogenesis

embryo implantation

embryo implantation

cell aging

cell aging

sensory perception of sound

locomotory behavior

regulation of blood pressure

cell death

zinc ion binding

response to heat

antioxidant activity

oxidoreductase activity

transmission of nerve impulse

removal of superoxide radicals

protein phosphatase 2B binding

extracellular matrix

cytoplasmic vesicle

response to nutrient levels

myelin maintenance in the peripheral nervous system

dendrite cytoplasm

regulation of T cell differentiation in the thymus

regulation of multicellular organism growth

response to drug

response to hydrogen peroxide

superoxide anion generation

protein homodimerization activity

cell soma

positive regulation of apoptosis

positive regulation of catalytic activity

protein complex

negative regulation of neuron apoptosis

response to ethanol

negative regulation of cholesterol biosynthetic process

regulation of protein kinase activity

regulation of organ growth

response to copper ion

muscle maintenance

metal ion binding

thymus development

response to axon injury

hydrogen peroxide biosynthetic process

hydrogen peroxide biosynthetic process

chaperone binding

regulation of mitochondrial membrane potential

oxidation reduction

heart contraction

neurofilament cytoskeleton organization

relaxation of vascular smooth muscle

auditory receptor cell stereocilium organization

Amyotrophic lateral sclerosis (ALS)

Huntington's disease

Prion diseases

204717_s_at -0.542 7.635 -2.268 3.833e-02 0.357 -3.881 SLC29A2 solute carrier family 29 (nucleoside transporters), member 2 11 -65886567 AF034102 11q13 Hs.569017 26

nucleoside transmembrane transporter activity

nucleus

nucleolus

plasma membrane

integral to plasma membrane

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

transport

cell proliferation

nucleoside transport

 
218429_s_at 0.347 6.713 2.268 3.833e-02 0.357 -3.881 C19orf66 chromosome 19 open reading frame 66 19 10057805 NM_018381 19p13.2 Hs.655613 2    
207996_s_at -0.712 6.652 -2.267 3.835e-02 0.357 -3.882 C18orf1 chromosome 18 open reading frame 1 18 13208785, 13601664, 13610866 NM_004338 18p11.2 Hs.149363 9

molecular_function

plasma membrane

biological_process

integral to membrane

 
225161_at -0.409 7.141 -2.267 3.837e-02 0.357 -3.882 GFM1 G elongation factor, mitochondrial 1 3 159845010 AI659020 3q25.1-q26.2 Hs.518355 11

nucleotide binding

translation elongation factor activity

GTPase activity

GTP binding

intracellular

mitochondrion

translational elongation

 
228254_at -0.268 6.186 -2.267 3.837e-02 0.357 -3.882 STAM2 signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 2 -152681560 AW024643 2q23.3 Hs.17200 32

protein binding

cytoplasm

endosome

cytosol

intracellular protein transport

membrane

Endocytosis

Jak-STAT signaling pathway

235780_at 0.379 3.224 2.267 3.837e-02 0.357 -3.882 PRKACB protein kinase, cAMP-dependent, catalytic, beta 1 84316332, 84316332, 84382539 BE622723 1p36.1 Hs.487325 38

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

cAMP-dependent protein kinase activity

ATP binding

nucleus

cytoplasm

cAMP-dependent protein kinase complex

protein amino acid phosphorylation

signal transduction

G-protein signaling, coupled to cAMP nucleotide second messenger

protein kinase cascade

hormone-mediated signaling

transferase activity

MAPK signaling pathway

Calcium signaling pathway

Chemokine signaling pathway

Apoptosis

Vascular smooth muscle contraction

Wnt signaling pathway

Hedgehog signaling pathway

Gap junction

Long-term potentiation

Olfactory transduction

Taste transduction

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Prion diseases

Vibrio cholerae infection

223155_at -0.444 8.022 -2.267 3.838e-02 0.357 -3.882 HDHD2 haloacid dehalogenase-like hydrolase domain containing 2 18 -42887778 AL136681 18q21.1 Hs.465041 8

metabolic process

hydrolase activity

 
230842_at 0.223 6.564 2.267 3.841e-02 0.357 -3.883 FGFR2 fibroblast growth factor receptor 2 10 -123231358, -123231358, -123227834, -123227834, -123227834, -123227834, -123227833 AI807481 10q26 Hs.533683 232

nucleotide binding

receptor activity

fibroblast growth factor receptor activity

protein binding

ATP binding

extracellular region

plasma membrane

plasma membrane

protein amino acid phosphorylation

heparin binding

fibroblast growth factor receptor signaling pathway

cell surface

integral to membrane

cell growth

transferase activity

MAPK signaling pathway

Endocytosis

Regulation of actin cytoskeleton

Pathways in cancer

Prostate cancer

225296_at -0.372 5.591 -2.267 3.841e-02 0.357 -3.883 ZNF317 zinc finger protein 317 19 9112085 AB046808   Hs.465829 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
211505_s_at -0.333 7.395 -2.267 3.841e-02 0.357 -3.883 STAU1 staufen, RNA binding protein, homolog 1 (Drosophila) 20 -47163282 AL136601 20q13.1 Hs.596704 26

double-stranded RNA binding

protein binding

intracellular

rough endoplasmic reticulum

microtubule associated complex

intracellular mRNA localization

ribonucleoprotein complex

 
221449_s_at -0.660 8.152 -2.266 3.844e-02 0.357 -3.884 ITFG1 integrin alpha FG-GAP repeat containing 1 16 -45746798 NM_030790 16q12.1 Hs.42217 5

protein binding

extracellular region

membrane

integral to membrane

 
215649_s_at 0.291 4.967 2.266 3.845e-02 0.358 -3.884 MVK mevalonate kinase 12 108495882 AF217536 12q24 Hs.130607 42

nucleotide binding

mevalonate kinase activity

ATP binding

cytoplasm

peroxisome

cholesterol biosynthetic process

metabolic process

isoprenoid biosynthetic process

phosphorylation

transferase activity

identical protein binding

Terpenoid backbone biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

219228_at 0.343 6.382 2.266 3.846e-02 0.358 -3.884 ZNF331 zinc finger protein 331 19 58715988, 58733144, 58750372 NM_018555 19q13.42 Hs.185674 8

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
232698_at 0.284 5.055 2.266 3.848e-02 0.358 -3.884 BPIL1 bactericidal/permeability-increasing protein-like 1 20 31059067 AK027068 20q11.21 Hs.257045 10

extracellular region

lipid binding

 
226212_s_at -0.468 6.099 -2.266 3.848e-02 0.358 -3.885 INSR insulin receptor 19 -7063265 AV726689 19p13.3-p13.2 Hs.465744 351

nucleotide binding

activation of MAPK activity

positive regulation of protein amino acid phosphorylation

heart morphogenesis

receptor signaling protein tyrosine kinase activity

receptor activity

insulin receptor activity

insulin-like growth factor receptor binding

ATP binding

GTP binding

endosome

microsome

cytosol

plasma membrane

plasma membrane

insulin receptor complex

caveola

carbohydrate metabolic process

G-protein coupled receptor protein signaling pathway

positive regulation of cell proliferation

positive regulation of cell proliferation

insulin receptor signaling pathway

endosome membrane

transferase activity

peptidyl-tyrosine phosphorylation

transformation of host cell by virus

protein phosphatase binding

male sex determination

positive regulation of cell migration

insulin-like growth factor I binding

insulin-like growth factor II binding

activation of protein kinase B activity

regulation of gene-specific transcription

SH2 domain binding

glucose homeostasis

positive regulation of MAPKKK cascade

3-phosphoinositide-dependent protein kinase binding

phosphoinositide 3-kinase binding

insulin binding

insulin receptor substrate binding

positive regulation of nitric oxide biosynthetic process

positive regulation of glycogen biosynthetic process

positive regulation of DNA replication

positive regulation of glycolysis

positive regulation of mitosis

regulation of embryonic development

positive regulation of glucose import

positive regulation of glucose import

protein amino acid autophosphorylation

positive regulation of developmental growth

protein heterotetramerization

PTB domain binding

positive regulation of protein kinase B signaling cascade

positive regulation of respiratory burst

Adherens junction

Insulin signaling pathway

Type II diabetes mellitus

222671_s_at -0.306 5.483 -2.266 3.849e-02 0.358 -3.885 JMJD4 jumonji domain containing 4 1 -225985513 AA582199 1q42.13 Hs.325081 Hs.555974 2    
214292_at 0.307 4.306 2.265 3.850e-02 0.358 -3.885 ITGB4 integrin, beta 4 17 71229110, 71232370 AA808063 17q25 Hs.632226 120

receptor activity

protein binding

cell communication

cell adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

integrin complex

membrane

integral to membrane

Focal adhesion

ECM-receptor interaction

Regulation of actin cytoskeleton

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

223319_at -0.332 7.040 -2.265 3.852e-02 0.358 -3.885 GPHN gephyrin 14 66043877 AF272663 14q23.3 Hs.208765 29

nucleotide binding

magnesium ion binding

catalytic activity

protein binding

intracellular

cytoplasm

cytoskeleton

plasma membrane

Mo-molybdopterin cofactor biosynthetic process

establishment of synaptic specificity at neuromuscular junction

cell junction

synapse

postsynaptic membrane

 
206536_s_at -0.315 4.250 -2.265 3.853e-02 0.358 -3.886 XIAP X-linked inhibitor of apoptosis X 122821728 U32974 Xq25 Hs.356076 170

protein binding

intracellular

cytoplasm

cytosol

cytosol

apoptosis

anti-apoptosis

zinc ion binding

ligase activity

modification-dependent protein catabolic process

peptidase inhibitor activity

caspase inhibitor activity

metal ion binding

Ubiquitin mediated proteolysis

Apoptosis

Focal adhesion

Pathways in cancer

Small cell lung cancer

202336_s_at -0.458 10.263 -2.265 3.855e-02 0.358 -3.886 PAM peptidylglycine alpha-amidating monooxygenase 5 102229425 NM_000919 5q14-q21 Hs.369430 34

monooxygenase activity

peptidylglycine monooxygenase activity

peptidylamidoglycolate lyase activity

copper ion binding

protein binding

extracellular region

protein modification process

peptide metabolic process

zinc ion binding

cellular process

membrane

integral to membrane

lyase activity

secretory granule

L-ascorbic acid binding

metal ion binding

oxidation reduction

 
1552524_at 0.368 5.967 2.264 3.858e-02 0.358 -3.887 ART5 ADP-ribosyltransferase 5 11 -3616311, -3616311 NM_053017 11p15.4 Hs.125680 6

NAD(P)+-protein-arginine ADP-ribosyltransferase activity

extracellular region

protein amino acid ADP-ribosylation

transferase activity, transferring glycosyl groups

 
202001_s_at 0.231 11.523 2.264 3.860e-02 0.358 -3.887 NDUFA6 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa 22 -40811475 NM_002490 22q13.2-q13.31 Hs.274416 15

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

transport

response to oxidative stress

NADH dehydrogenase (ubiquinone) activity

membrane

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

1565947_a_at 0.259 3.298 2.264 3.862e-02 0.358 -3.888 CHML choroideremia-like (Rab escort protein 2) 1 -239858789 AJ293392 1q42-qter Hs.654545 17

Rab geranylgeranyltransferase activity

GTPase activator activity

Rab-protein geranylgeranyltransferase complex

intracellular protein transport

visual perception

regulation of GTPase activity

 
228697_at -0.437 9.162 -2.263 3.866e-02 0.358 -3.889 HINT3 histidine triad nucleotide binding protein 3 6 126319553 AW731710 6q22.32 Hs.72325 6

nucleus

cytoplasm

hydrolase activity

 
201513_at -0.488 6.391 -2.263 3.867e-02 0.359 -3.889 TSN translin 2 122229590 AI659180 2q21.1 Hs.75066 28

nucleus

cytoplasm

DNA recombination

sequence-specific DNA binding

 
231742_at 0.284 4.236 2.263 3.868e-02 0.359 -3.889 CRX cone-rod homeobox 19 53016910 NM_000554 19q13.3 Hs.617342 Hs.633434 Hs.639114 31

chromatin binding

transcription factor activity

protein binding

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

visual perception

circadian rhythm

organ morphogenesis

transcription activator activity

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

positive regulation of photoreceptor cell differentiation

response to stimulus

 
205052_at 0.391 8.373 2.263 3.871e-02 0.359 -3.890 AUH AU RNA binding protein/enoyl-Coenzyme A hydratase 9 -93015917 NM_001698 9q22.31 Hs.175905 16

RNA binding

mRNA 3'-UTR binding

enoyl-CoA hydratase activity

methylglutaconyl-CoA hydratase activity

mitochondrion

mRNA catabolic process

metabolic process

branched chain family amino acid catabolic process

lyase activity

Valine, leucine and isoleucine degradation

Metabolic pathways

1555421_at 0.227 2.075 2.262 3.872e-02 0.359 -3.890 AP1S3 adaptor-related protein complex 1, sigma 3 subunit 2 -224328290 BC009606 2q36.1 Hs.632555 13

protein binding

Golgi apparatus

cytosol

coated pit

intracellular protein transport

endocytosis

protein transporter activity

membrane

membrane coat

clathrin coat of trans-Golgi network vesicle

clathrin adaptor complex

cytoplasmic vesicle

Lysosome

210844_x_at -0.333 8.424 -2.262 3.876e-02 0.359 -3.891 CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 5 138117005 D14705 5q31 Hs.534797 Hs.656653 70

structural molecule activity

protein binding

cytoplasm

plasma membrane

adherens junction

cell adhesion

actin cytoskeleton

vinculin binding

cell junction

apical junction assembly

cadherin binding

Adherens junction

Tight junction

Leukocyte transendothelial migration

Pathways in cancer

Endometrial cancer

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

1558862_at 0.221 3.872 2.262 3.876e-02 0.359 -3.891 NBPF5 neuroblastoma breakpoint family, member 5 1   BC043522 1p13.3 Hs.512038 2

cytoplasm

 
210813_s_at -0.393 3.200 -2.262 3.877e-02 0.359 -3.891 XRCC4 X-ray repair complementing defective repair in Chinese hamster cells 4 5 82409072 BC005259 5q13-q14 Hs.567359 93

condensed chromosome

in utero embryonic development

pro-B cell differentiation

DNA binding

nucleus

nucleus

cytosol

DNA-dependent protein kinase-DNA ligase 4 complex

double-strand break repair via nonhomologous end joining

double-strand break repair via nonhomologous end joining

double-strand break repair via nonhomologous end joining

response to DNA damage stimulus

central nervous system development

protein C-terminus binding

response to X-ray

response to gamma radiation

ligase activity

provirus integration

initiation of viral infection

DNA ligase IV complex

T cell differentiation in the thymus

immunoglobulin V(D)J recombination

negative regulation of neuron apoptosis

isotype switching

positive regulation of fibroblast proliferation

positive regulation of neurogenesis

DNA ligation during DNA repair

positive regulation of ligase activity

Non-homologous end-joining

210605_s_at -0.276 6.486 -2.262 3.878e-02 0.359 -3.891 MFGE8 milk fat globule-EGF factor 8 protein 15 -87242917 BC003610 15q25 Hs.3745 36

phosphatidylserine binding

integrin binding

protein binding

extracellular space

cytoplasm

phagocytosis, recognition

phagocytosis, engulfment

cell adhesion

single fertilization

phosphatidylethanolamine binding

external side of plasma membrane

membrane

extrinsic to plasma membrane

interspecies interaction between organisms

positive regulation of phagocytosis

 
229246_at 0.383 6.236 2.262 3.878e-02 0.359 -3.891 FLJ44342 hypothetical LOC645460 17   AI803504 17q22 Hs.68714 Hs.710026 1    
201323_at -0.397 6.712 -2.261 3.880e-02 0.359 -3.892 EBNA1BP2 EBNA1 binding protein 2 1 -43402432, -43402432 NM_006824 1p35-p33 Hs.346868 20

protein binding

membrane fraction

nucleus

nucleolus

ribosome biogenesis

 
241370_at -0.471 7.686 -2.261 3.882e-02 0.359 -3.892 LOC286052 hypothetical protein LOC286052 8   AA278233 8q24.13 Hs.100691 1    
1562736_at 0.326 3.089 2.261 3.883e-02 0.359 -3.892 LHX9 LIM homeobox 9 1 196148257, 196153139 AJ277914 1q31-q32 Hs.442578 Hs.706475 6

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

sequence-specific DNA binding

metal ion binding

 
209062_x_at -0.286 6.375 -2.261 3.884e-02 0.359 -3.893 NCOA3 nuclear receptor coactivator 3 20 45564063 AF010227 20q12 Hs.592142 140

transcription coactivator activity

histone acetyltransferase activity

signal transducer activity

nucleus

cytoplasm

signal transduction

acyltransferase activity

transferase activity

androgen receptor signaling pathway

transcription regulator activity

positive regulation of transcription, DNA-dependent

thyroid hormone receptor binding

protein N-terminus binding

androgen receptor binding

 
1558517_s_at 0.330 4.471 2.261 3.885e-02 0.359 -3.893 LRRC8C leucine rich repeat containing 8 family, member C 1 89871231 CA773938 1p22.2 Hs.412836 6

protein binding

membrane

integral to membrane

 
225421_at -0.612 8.529 -2.261 3.886e-02 0.359 -3.893 PM20D2 peptidase M20 domain containing 2 6 89912487 AI654133 6q15 Hs.709364 2

proteolysis

metallopeptidase activity

hydrolase activity

protein dimerization activity

 
230804_at -0.407 2.494 -2.260 3.887e-02 0.359 -3.893 NKAPL NFKB activating protein-like 6 28335076 AA902654 6p22.1 Hs.239181 3    
220806_x_at 0.391 3.848 2.260 3.888e-02 0.359 -3.893 GNG13 guanine nucleotide binding protein (G protein), gamma 13 16 -788041 NM_016541 16p13.3 Hs.247888 13

GTPase activity

signal transducer activity

heterotrimeric G-protein complex

plasma membrane

signal transduction

activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger

hormone-mediated signaling

sensory perception of taste

Chemokine signaling pathway

Taste transduction

215073_s_at 0.356 5.897 2.260 3.890e-02 0.359 -3.894 NR2F2 nuclear receptor subfamily 2, group F, member 2 15 94670160, 94675114, 94676797, 94677572 AL554245 15q26 Hs.657455 27

transcription factor activity

ligand-regulated transcription factor activity

steroid hormone receptor activity

transcription corepressor activity

nucleus

regulation of transcription from RNA polymerase II promoter

lipid metabolic process

signal transduction

zinc ion binding

sequence-specific DNA binding

metal ion binding

 
238886_at 0.282 4.886 2.260 3.890e-02 0.359 -3.894 TMED10 transmembrane emp24-like trafficking protein 10 (yeast) 14 -74667923 BF056141 14q24.3 Hs.74137 22

protein binding

microsome

ER-Golgi intermediate compartment

Golgi apparatus

cis-Golgi network

protein transport

membrane

integral to membrane

vesicle-mediated transport

melanosome

zymogen granule membrane

regulated secretory pathway

vesicle targeting, to, from or within Golgi

 
1559449_a_at -0.335 4.646 -2.260 3.891e-02 0.359 -3.894 ZNF254 zinc finger protein 254 19 24061815 BF679633 19p12 Hs.434406 5

negative regulation of transcription from RNA polymerase II promoter

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1570173_at -0.258 2.342 -2.260 3.891e-02 0.359 -3.894 INTS7 integrator complex subunit 7 1 -210181320 BC036009 1p36.13-q42.3 Hs.369285 8

protein binding

nucleus

snRNA processing

integrator complex

 
224299_x_at 0.264 5.439 2.260 3.892e-02 0.359 -3.895 FTCD formiminotransferase cyclodeaminase 21 -46381121, -46380603 AF289023 21q22.3 Hs.415846 11

folic acid binding

cytoplasm

Golgi apparatus

histidine metabolic process

folic acid and derivative metabolic process

transferase activity

lyase activity

glutamate formimidoyltransferase activity

formimidoyltetrahydrofolate cyclodeaminase activity

cellular metabolic process

Histidine metabolism

One carbon pool by folate

Metabolic pathways

239582_at 0.218 4.301 2.260 3.893e-02 0.359 -3.895 PML promyelocytic leukemia 15 72074066, 72074066, 72074066 AW514654 15q22 Hs.526464 208

response to hypoxia

DNA binding

intracellular

insoluble fraction

nucleus

nucleoplasm

nucleolus

cytoplasm

protein complex assembly

induction of apoptosis

activation of caspase activity

DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest

cell cycle arrest

transforming growth factor beta receptor signaling pathway

common-partner SMAD protein phosphorylation

SMAD protein nuclear translocation

cell aging

zinc ion binding

negative regulation of cell proliferation

response to UV

response to gamma radiation

nuclear matrix

negative regulation of transcription

negative regulation of angiogenesis

PML body

myeloid cell differentiation

negative regulation of cell growth

transcription regulator activity

PML body organization

ubiquitin protein ligase binding

nuclear membrane

response to cytokine stimulus

DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis

protein homodimerization activity

interspecies interaction between organisms

regulation of MHC class I biosynthetic process

SMAD binding

metal ion binding

retinoic acid receptor signaling pathway

maintenance of protein location in nucleus

Ubiquitin mediated proteolysis

Pathways in cancer

Acute myeloid leukemia

214464_at -0.466 7.215 -2.259 3.895e-02 0.359 -3.895 CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 1 -225244188 NM_003607 1q42.11 Hs.35433 20

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

small GTPase regulator activity

ATP binding

cytoplasm

cell-cell junction

protein amino acid phosphorylation

intracellular signaling cascade

zinc ion binding

transferase activity

diacylglycerol binding

cell leading edge

actin cytoskeleton reorganization

identical protein binding

 
228363_at -0.248 8.575 -2.259 3.895e-02 0.359 -3.895 XIAP X-linked inhibitor of apoptosis X 122821728 BF109251 Xq25 Hs.356076 170

protein binding

intracellular

cytoplasm

cytosol

cytosol

apoptosis

anti-apoptosis

zinc ion binding

ligase activity

modification-dependent protein catabolic process

peptidase inhibitor activity

caspase inhibitor activity

metal ion binding

Ubiquitin mediated proteolysis

Apoptosis

Focal adhesion

Pathways in cancer

Small cell lung cancer

219397_at -0.408 6.397 -2.259 3.896e-02 0.359 -3.895 COQ10B coenzyme Q10 homolog B (S. cerevisiae) 2 198026475 NM_025147 2q33.1 Hs.715692 3

mitochondrion

 
242900_at -0.518 4.652 -2.259 3.897e-02 0.359 -3.896 ALG10B asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast) 12 36996823 BF244214 12q12 Hs.259305 5

plasma membrane

integral to membrane

transferase activity, transferring hexosyl groups

N-Glycan biosynthesis

Metabolic pathways

204809_at -0.380 7.354 -2.259 3.901e-02 0.360 -3.897 CLPX ClpX caseinolytic peptidase X homolog (E. coli) 15 -63229836 NM_006660 15q22.2-q22.3 Hs.113823 8

nucleotide binding

ATP-dependent peptidase activity

ATP binding

mitochondrion

mitochondrion

mitochondrial inner membrane

protein folding

zinc ion binding

mitochondrial endopeptidase Clp complex

protein transport

peptidase activator activity

ATPase activity

mitochondrial nucleoid

metal ion binding

unfolded protein binding

proteolysis involved in cellular protein catabolic process

 
235504_at -0.493 4.434 -2.258 3.903e-02 0.360 -3.897 GREM2 gremlin 2, cysteine knot superfamily, homolog (Xenopus laevis) 1 -238719495 BE786990 1q43 Hs.98206 9

cytokine activity

extracellular region

extracellular region

extracellular space

BMP signaling pathway

 
213670_x_at -0.311 6.786 -2.258 3.906e-02 0.360 -3.898 NSUN5B NOL1/NOP2/Sun domain family, member 5B 7 74877581 AI768378 7q11.23 Hs.436034 5    
37005_at 0.270 7.230 2.258 3.907e-02 0.360 -3.898 NBL1 neuroblastoma, suppression of tumorigenicity 1 1 19842312, 19843394 D28124 1p36.13 Hs.654502 18

extracellular region

 
202026_at 0.233 11.155 2.258 3.908e-02 0.360 -3.898 SDHD succinate dehydrogenase complex, subunit D, integral membrane protein 11 111462780 NM_003002 11q23 Hs.356270 Hs.719164 69

succinate dehydrogenase activity

mitochondrion

mitochondrial envelope

mitochondrial inner membrane

mitochondrial inner membrane

tricarboxylic acid cycle

transport

electron carrier activity

membrane

integral to membrane

heme binding

electron transport chain

metal ion binding

Citrate cycle (TCA cycle)

Oxidative phosphorylation

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

224740_at -0.456 6.749 -2.258 3.908e-02 0.360 -3.898 C5orf43 chromosome 5 open reading frame 43 5 -60489292 BE613001 5q12.1 Hs.508479 2

membrane

integral to membrane

 
1558934_a_at 0.321 3.396 2.257 3.912e-02 0.360 -3.899 GTF2H5 general transcription factor IIH, polypeptide 5 6 158509366 AL134162 6q25.3 Hs.356224 11

DNA binding

nucleus

nucleotide-excision repair

response to DNA damage stimulus

regulation of transcription

Nucleotide excision repair

1565641_at 0.246 6.829 2.257 3.915e-02 0.360 -3.900 C16orf45 chromosome 16 open reading frame 45 16 15435825, 15503623 BE503823 16p13.11 Hs.401798 5

protein binding

 
226279_at -0.880 6.872 -2.257 3.915e-02 0.360 -3.900 PRSS23 protease, serine, 23 11 86189138 AW471145 11q14.1 Hs.25338 13

serine-type endopeptidase activity

extracellular region

nucleus

proteolysis

peptidase activity

 
201963_at 0.510 11.160 2.256 3.917e-02 0.360 -3.900 ACSL1 acyl-CoA synthetase long-chain family member 1 4 -185913742 NM_021122 4q34-q35 Hs.406678 20

nucleotide binding

magnesium ion binding

long-chain-fatty-acid-CoA ligase activity

long-chain-fatty-acid-CoA ligase activity

ATP binding

mitochondrion

mitochondrial outer membrane

peroxisome

peroxisomal membrane

endoplasmic reticulum

microsome

cytosol

lipid metabolic process

fatty acid metabolic process

digestion

metabolic process

membrane

integral to membrane

ligase activity

regulation of fatty acid oxidation

Fatty acid metabolism

Metabolic pathways

PPAR signaling pathway

Adipocytokine signaling pathway

204051_s_at -0.900 5.763 -2.256 3.919e-02 0.360 -3.901 SFRP4 secreted frizzled-related protein 4 7 -37912059 AW089415 7p14.1 Hs.658169 27

protein binding

extracellular region

extracellular space

signal transduction

embryo implantation

Wnt receptor signaling pathway

cell differentiation

Wnt signaling pathway

219507_at -0.349 5.449 -2.256 3.921e-02 0.360 -3.901 RSRC1 arginine/serine-rich coiled-coil 1 3 159310585 NM_016625 3q25.32 Hs.591283 5

alternative nuclear mRNA splicing, via spliceosome

protein binding

nucleus

protein amino acid phosphorylation

nucleocytoplasmic transport

RNA splicing

nuclear speck

response to antibiotic

 
206268_at 0.250 4.319 2.256 3.922e-02 0.360 -3.901 LEFTY1 left-right determination factor 1 1 -224140604 NM_020997 1q42.1 Hs.656214 11

cytokine activity

transforming growth factor beta receptor binding

extracellular region

extracellular space

transforming growth factor beta receptor signaling pathway

multicellular organismal development

growth factor activity

cell growth

TGF-beta signaling pathway

231860_at -0.347 5.417 -2.256 3.922e-02 0.360 -3.901 BRWD1 bromodomain and WD repeat domain containing 1 21 -39590234, -39484017, -39479273 AW268572 21q22.2 Hs.654740 8

protein binding

nucleus

cytoplasm

regulation of transcription from RNA polymerase II promoter

biological_process

transcription regulator activity

regulation of transcription

 
236837_x_at 0.376 3.180 2.256 3.924e-02 0.360 -3.902 LOC650794 similar to FRAS1 related extracellular matrix protein 2 13   BE669806 13q12.11 Hs.147563      
210295_at 0.192 4.509 2.256 3.924e-02 0.360 -3.902 MAGEA10 melanoma antigen family A, 10 X -151053563 BC004105 Xq28 Hs.18048 6    
222015_at 0.245 6.356 2.255 3.925e-02 0.360 -3.902 CSNK1E casein kinase 1, epsilon 22 -37016642, -37016642 AW192876 22q13.1 Hs.474833 65

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

cytoplasm

DNA repair

protein amino acid phosphorylation

signal transduction

transferase activity

Wnt signaling pathway

Hedgehog signaling pathway

Circadian rhythm - mammal

214907_at 0.481 4.284 2.255 3.925e-02 0.360 -3.902 CEACAM21 carcinoembryonic antigen-related cell adhesion molecule 21 19 46774370 BF110434 19q13.2 Hs.655885 3

membrane

integral to membrane

 
1553465_a_at 0.344 3.698 2.255 3.926e-02 0.360 -3.902 CES7 carboxylesterase 7 16 -54437566 NM_145024 16q12.2 Hs.350800 4

carboxylesterase activity

extracellular region

hydrolase activity

Tropane, piperidine and pyridine alkaloid biosynthesis

Drug metabolism - other enzymes

1554017_at 0.238 5.011 2.255 3.928e-02 0.360 -3.902 RILPL1 Rab interacting lysosomal protein-like 1 12 -122521861 BC020829 12q24.31 Hs.530315 3

cytoplasm

cytosol

 
221602_s_at 0.453 5.142 2.255 3.929e-02 0.360 -3.903 FAIM3 Fas apoptotic inhibitory molecule 3 1 -205143252, -205143252 AF057557 1q32.1 Hs.58831 Hs.719320 10

nucleus

cytoplasm

plasma membrane

focal adhesion

anti-apoptosis

immune response

cellular defense response

integral to membrane

 
226469_s_at -0.740 5.475 -2.255 3.929e-02 0.360 -3.903 GGT7 gamma-glutamyltransferase 7 20 -32896183 AL049709 20q11.22 Hs.433738 9

gamma-glutamyltransferase activity

glutathione biosynthetic process

acyltransferase activity

membrane

integral to membrane

transferase activity

Taurine and hypotaurine metabolism

Selenoamino acid metabolism

Cyanoamino acid metabolism

Glutathione metabolism

Arachidonic acid metabolism

Metabolic pathways

212066_s_at -0.281 8.025 -2.255 3.929e-02 0.360 -3.903 USP34 ubiquitin specific peptidase 34 2 -61268093 AB018272 2p15 Hs.644708 9

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
1557984_s_at -0.785 4.624 -2.255 3.929e-02 0.360 -3.903 RPAP3 RNA polymerase II associated protein 3 12 -46341982 BI464019 12q13.11 Hs.437855 6

binding

 
220525_s_at -0.310 7.576 -2.255 3.930e-02 0.360 -3.903 AUP1 ancient ubiquitous protein 1 2 -74607282 NM_012103 2p13 Hs.411480 10

protein binding

endoplasmic reticulum

membrane

integral to membrane

modification-dependent protein catabolic process

 
229397_s_at -0.308 5.776 -2.255 3.931e-02 0.360 -3.903 GRLF1 glucocorticoid receptor DNA binding factor 1 19 52113772 AI275597 19q13.3 Hs.509447 26

DNA binding

transcription corepressor activity

GTPase activator activity

intracellular

nucleus

cytoplasm

signal transduction

negative regulation of transcription

Focal adhesion

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

64440_at 0.316 7.376 2.255 3.931e-02 0.360 -3.903 IL17RC interleukin 17 receptor C 3 9933763 AI560217 3p25.3 3p25.3-p24.1 Hs.129959 14

receptor activity

plasma membrane

integral to membrane

 
233644_at 0.296 2.681 2.255 3.931e-02 0.360 -3.903 KATNAL2 katanin p60 subunit A-like 2 18 42780784 AL512748 18q21.1 Hs.404137 Hs.660213 3

nucleotide binding

ATP binding

microtubule

microtubule-severing ATPase activity

hydrolase activity

nucleoside-triphosphatase activity

 
218740_s_at 0.274 7.660 2.255 3.931e-02 0.360 -3.903 CDK5RAP3 CDK5 regulatory subunit associated protein 3 17 43403427 NM_025197 17q21.32 Hs.20157 21

regulation of cyclin-dependent protein kinase activity

protein binding

cellular_component

brain development

neuronal Cdc2-like kinase binding

regulation of neuron differentiation

 
227201_at -0.435 6.553 -2.255 3.931e-02 0.360 -3.903 LOC643837 hypothetical LOC643837 1 752926 AI679230 1p36.33 Hs.133183 2    
218611_at -0.809 7.569 -2.254 3.932e-02 0.360 -3.903 IER5 immediate early response 5 1 179324260 NM_016545 1q25.3 Hs.716489 8    
229521_at 0.307 5.344 2.254 3.933e-02 0.360 -3.904 FLJ36031 hypothetical protein FLJ36031 7 -106086384 BE466274 7q22.3 Hs.29692 5    
221121_at 0.231 4.718 2.254 3.934e-02 0.360 -3.904 CXorf48 chromosome X open reading frame 48 X -134118128, -134118126 NM_017863 Xq26.3 Hs.272804 4    
224001_at 0.298 5.706 2.254 3.935e-02 0.360 -3.904 FAM135B family with sequence similarity 135, member B 8 -139211447 AF131744 8q24.23 Hs.126024 5    
226907_at -0.855 7.905 -2.254 3.935e-02 0.360 -3.904 PPP1R14C protein phosphatase 1, regulatory (inhibitor) subunit 14C 6 150505880 N32557 6q24.3-q25.3 Hs.486798 10

protein serine/threonine phosphatase inhibitor activity

protein binding

cytoplasm

membrane

regulation of phosphorylation

 
220110_s_at 0.324 3.560 2.254 3.938e-02 0.360 -3.905 NXF3 nuclear RNA export factor 3 X -102217405 NM_022052 Xq22-q23 Hs.60386 7

nucleotide binding

mRNA binding

protein binding

intracellular

nucleus

cytoplasm

transport

poly(A)+ mRNA export from nucleus

nuclear RNA export factor complex

 
205247_at 0.383 6.980 2.254 3.938e-02 0.360 -3.905 NOTCH4 Notch homolog 4 (Drosophila) 6 -32270597, -3569804, -3377584 AI743713 6p21.3 Hs.436100 70

patterning of blood vessels

cell fate determination

morphogenesis of a branching structure

calcium ion binding

protein binding

extracellular space

nucleus

plasma membrane

integral to plasma membrane

Notch signaling pathway

JAK-STAT cascade

nervous system development

brain development

aging

embryonic development

basal plasma membrane

cell surface

hemopoiesis

mammary gland development

regulation of transcription

negative regulation of endothelial cell differentiation

positive regulation of transcription, DNA-dependent

protein heterodimerization activity

positive regulation of smooth muscle cell proliferation

advanced glycation end-product receptor activity

regulation of developmental process

Dorso-ventral axis formation

Notch signaling pathway

209393_s_at -0.481 7.771 -2.254 3.939e-02 0.360 -3.905 EIF4E2 eukaryotic translation initiation factor 4E family member 2 2 233123600 AF047695 2q37.1 Hs.292026 Hs.700929 15

RNA cap binding

translation initiation factor activity

protein binding

cytoplasm

translational initiation

regulation of translation

mTOR signaling pathway

Insulin signaling pathway

214261_s_at 0.349 3.938 2.253 3.940e-02 0.360 -3.905 ADH6 alcohol dehydrogenase 6 (class V) 4 -100344901, -100342817 H71135 4q23 Hs.586161 13

alcohol dehydrogenase activity, zinc-dependent

binding

cellular_component

cytoplasm

cytosol

ethanol oxidation

zinc ion binding

electron carrier activity

oxidoreductase activity

response to ethanol

metal ion binding

oxidation reduction

Glycolysis / Gluconeogenesis

Fatty acid metabolism

Tyrosine metabolism

1- and 2-Methylnaphthalene degradation

3-Chloroacrylic acid degradation

Retinol metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

Metabolic pathways

218567_x_at -0.343 6.024 -2.253 3.940e-02 0.360 -3.905 DPP3 dipeptidyl-peptidase 3 11 66004455 NM_005700 11q12-q13.1 Hs.502914 29

aminopeptidase activity

cytoplasm

proteolysis

peptidase activity

metallopeptidase activity

dipeptidyl-peptidase activity

zinc ion binding

metal ion binding

 
205993_s_at 0.228 5.742 2.253 3.941e-02 0.360 -3.905 TBX2 T-box 2 17 56832038 NM_005994 17q23 Hs.531085 25

negative regulation of transcription from RNA polymerase II promoter

heart morphogenesis

transcription factor activity

protein binding

nucleus

transcription factor complex

multicellular organismal development

muscle cell fate determination

cell aging

positive regulation of cell proliferation

transcription repressor activity

mammary gland development

sequence-specific DNA binding

cardiac muscle tissue development

 
204350_s_at -0.300 7.296 -2.253 3.941e-02 0.360 -3.905 MED7 mediator complex subunit 7 5 -156498028, -156498028 NM_004270 5q33.3 Hs.279902 Hs.719330 15

transcription coactivator activity

protein binding

nucleus

transcription factor complex

regulation of transcription from RNA polymerase II promoter

transcription initiation from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

transcription regulator activity

regulation of transcription

 
219363_s_at 0.349 8.548 2.253 3.942e-02 0.360 -3.906 MTERFD1 MTERF domain containing 1 8 -97320820 NM_015942 8q22.1 Hs.308613 5

nucleus

mitochondrion

 
216587_s_at 0.302 3.795 2.253 3.942e-02 0.360 -3.906 FZD8 frizzled homolog 8 (Drosophila) 10 -35967182 AL121749 10p11.21 Hs.302634 14

non-G-protein coupled 7TM receptor activity

G-protein coupled receptor activity

G-protein coupled receptor protein signaling pathway

multicellular organismal development

membrane

integral to membrane

Wnt receptor signaling pathway

Wnt-protein binding

Wnt receptor activity

Wnt signaling pathway

Melanogenesis

Pathways in cancer

Colorectal cancer

Basal cell carcinoma

1558523_at 0.259 2.859 2.253 3.944e-02 0.360 -3.906 FAM184A family with sequence similarity 184, member A 6 -119322694, -119322694 AJ420563 6q22.31 Hs.443789 5    
227612_at 0.240 3.583 2.253 3.944e-02 0.360 -3.906 ELAVL3 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C) 19 -11423142 R20763 19p13.2 Hs.1701 8

nucleotide binding

RNA binding

multicellular organismal development

nervous system development

cell differentiation

 
214900_at 0.187 5.485 2.253 3.946e-02 0.360 -3.906 ZKSCAN1 zinc finger with KRAB and SCAN domains 1 7 99451154 AC004522 7q21.3-q22.1 Hs.615360 11

transcription factor activity

intracellular

nucleus

cytoplasm

mitochondrion

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
203848_at -0.356 6.645 -2.253 3.946e-02 0.360 -3.906 AKAP8 A kinase (PRKA) anchor protein 8 19 -15325334 AL050160 19p13.1 Hs.719292 18

condensed chromosome

female pronucleus

DNA binding

intracellular

nucleus

nucleolus

mitosis

mitotic chromosome condensation

signal transduction

zinc ion binding

nuclear matrix

protein kinase binding

metal ion binding

 
220805_at 0.277 5.648 2.253 3.946e-02 0.360 -3.907 HRH2 histamine receptor H2 5 175017645, 175041069 NM_022304 5q35.2 Hs.247885 Hs.716212 41

receptor activity

G-protein coupled receptor activity

histamine receptor activity

plasma membrane

integral to plasma membrane

immune response

signal transduction

G-protein signaling, coupled to cyclic nucleotide second messenger

Calcium signaling pathway

Neuroactive ligand-receptor interaction

201178_at -0.289 7.494 -2.252 3.953e-02 0.361 -3.908 FBXO7 F-box protein 7 22 31200706, 31201223 NM_012179 22q12-q13 Hs.5912 19

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

ubiquitin-dependent protein catabolic process

regulation of protein stability

 
200880_at -0.459 7.305 -2.252 3.953e-02 0.361 -3.908 DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 9 33015208 AL534104 9p13-p12 Hs.445203 Hs.707338 27

protein folding

response to unfolded protein

spermatogenesis

zinc ion binding

membrane

sperm motility

androgen receptor signaling pathway

heat shock protein binding

metal ion binding

low-density lipoprotein receptor binding

unfolded protein binding

 
201295_s_at -0.750 4.703 -2.252 3.954e-02 0.361 -3.908 WSB1 WD repeat and SOCS box-containing 1 17 22645232 BF111821 17q11.1 Hs.446017 21

molecular_function

protein binding

cellular_component

intracellular

intracellular signaling cascade

biological_process

modification-dependent protein catabolic process

 
243570_at 0.392 4.003 2.251 3.956e-02 0.361 -3.909 SPCS2 signal peptidase complex subunit 2 homolog (S. cerevisiae) 11 74337939 AA921960 11q13.4 Hs.282700 Hs.705711 4

endoplasmic reticulum

signal peptidase complex

microsome

signal peptide processing

peptidase activity

membrane

integral to membrane

 
235747_at -0.440 6.792 -2.251 3.957e-02 0.361 -3.909 SLC25A16 solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 10 -69912102 AI305170 10q21.3 Hs.180408 6

binding

mitochondrion

mitochondrial inner membrane

transport

solute:solute antiporter activity

membrane

integral to membrane

 
225262_at -0.441 6.462 -2.250 3.963e-02 0.361 -3.910 FOSL2 FOS-like antigen 2 2 28469282 AI670862 2p23.3 Hs.220971 Hs.596972 20

transcription factor activity

nucleus

nucleolus

regulation of transcription from RNA polymerase II promoter

cell death

sequence-specific DNA binding

protein dimerization activity

positive regulation of fibroblast proliferation

 
213988_s_at -0.413 5.980 -2.250 3.963e-02 0.361 -3.910 SAT1 spermidine/spermine N1-acetyltransferase 1 X 23711195 BE971383 Xp22.1 Hs.28491 46

diamine N-acetyltransferase activity

protein binding

intracellular

cytoplasm

metabolic process

acyltransferase activity

transferase activity

Arginine and proline metabolism

Metabolic pathways

209847_at 0.479 4.730 2.250 3.963e-02 0.361 -3.910 CDH17 cadherin 17, LI cadherin (liver-intestine) 8 -95208569, -95208569 U07969 8q22.1 Hs.591853 20

transporter activity

proton-dependent oligopeptide secondary active transmembrane transporter activity

calcium ion binding

protein binding

plasma membrane

transport

oligopeptide transport

cell adhesion

homophilic cell adhesion

integral to membrane

basolateral plasma membrane

calcium-dependent cell-cell adhesion

 
210935_s_at -0.303 4.435 -2.250 3.963e-02 0.361 -3.910 WDR1 WD repeat domain 1 4 -9685060 AF274954 4p16.1 Hs.128548 Hs.713658 15

actin binding

protein binding

cytoplasm

cytoskeleton

sensory perception of sound

 
203060_s_at -0.741 6.456 -2.250 3.964e-02 0.361 -3.910 PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 10 89409455 AF074331 10q23-q24 Hs.524491 14

sulfate assimilation

nucleotide binding

skeletal system development

adenylylsulfate kinase activity

sulfate adenylyltransferase (ATP) activity

protein binding

ATP binding

blood coagulation

nucleotidyltransferase activity

Purine metabolism

Selenoamino acid metabolism

Sulfur metabolism

Metabolic pathways

218704_at 0.262 4.638 2.250 3.968e-02 0.361 -3.911 RNF43 ring finger protein 43 17 -53786036 NM_017763 17q22 Hs.584916 7

protein binding

nucleus

nuclear envelope

endoplasmic reticulum

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
206896_s_at 0.480 5.585 2.250 3.968e-02 0.361 -3.911 GNG7 guanine nucleotide binding protein (G protein), gamma 7 19 -2462217 NM_005145 19p13.3 Hs.515544 12

behavioral fear response

signal transducer activity

heterotrimeric G-protein complex

plasma membrane

signal transduction

receptor guanylyl cyclase signaling pathway

locomotory behavior

regulation of G-protein coupled receptor protein signaling pathway

hormone-mediated signaling

Chemokine signaling pathway

221629_x_at 0.286 6.634 2.250 3.969e-02 0.361 -3.912 C8orf30A chromosome 8 open reading frame 30A 8 145264659, 145408687 AF151022 8q24.3 Hs.300224 5

binding

cellular_component

biological_process

 
225774_at -0.569 4.668 -2.249 3.970e-02 0.361 -3.912 RSPRY1 ring finger and SPRY domain containing 1 16 55777741 AA062971 16q13 Hs.460885 5

protein binding

extracellular region

zinc ion binding

metal ion binding

 
243017_at 0.301 4.732 2.249 3.971e-02 0.361 -3.912 LOC158572 hypothetical LOC158572 X -49528067 AA032156 Xp11.23 Hs.408191 3    
223274_at 0.208 4.763 2.249 3.971e-02 0.361 -3.912 TCF19 transcription factor 19 6 31234281, 2577566, 2376100 BC002493 6p21.3 Hs.584807 9

transcription factor activity

protein binding

nucleus

regulation of transcription from RNA polymerase II promoter

zinc ion binding

cell proliferation

regulation of transcription

metal ion binding

 
225545_at -0.817 9.032 -2.249 3.973e-02 0.361 -3.912 EEF2K eukaryotic elongation factor-2 kinase 16 22125092 BF001312 16p12.2 Hs.498892 22

nucleotide binding

protein serine/threonine kinase activity

elongation factor-2 kinase activity

calcium ion binding

calmodulin binding

ATP binding

cytoplasm

cytosol

translational elongation

protein amino acid phosphorylation

translation factor activity, nucleic acid binding

transferase activity

 
1552615_at 0.215 7.613 2.249 3.975e-02 0.362 -3.913 ACACB acetyl-Coenzyme A carboxylase beta 12 108061584 NM_001093 12q24.11 Hs.234898 22

nucleotide binding

acetyl-CoA carboxylase activity

biotin carboxylase activity

ATP binding

cytoplasm

Golgi apparatus

cytosol

fatty acid biosynthetic process

metabolic process

biotin binding

membrane

ligase activity

manganese ion binding

regulation of fatty acid oxidation

metal ion binding

Fatty acid biosynthesis

Pyruvate metabolism

Propanoate metabolism

Metabolic pathways

Insulin signaling pathway

Adipocytokine signaling pathway

225747_at 0.438 10.723 2.249 3.977e-02 0.362 -3.913 COQ10A coenzyme Q10 homolog A (S. cerevisiae) 12 54946908, 54947333 AL521634 12q13.3 Hs.4096 5

mitochondrion

 
223279_s_at -0.369 9.371 -2.249 3.977e-02 0.362 -3.913 UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 15 -68733946, -68733946 AF322916 15q22-q24 Hs.108049 12

molecular_function

protein binding

extracellular region

membrane fraction

soluble fraction

nucleus

nuclear envelope

cytoplasm

cytosol

cytoskeleton

DNA damage response, signal transduction resulting in induction of apoptosis

induction of apoptosis by oxidative stress

response to UV

viral reproduction

positive regulation of protein import into nucleus

negative regulation of NF-kappaB import into nucleus

positive regulation of apoptosis

positive regulation of caspase activity

apoptosome

perinuclear region of cytoplasm

negative regulation of inflammatory response

 
239057_at -0.488 11.264 -2.249 3.978e-02 0.362 -3.914 LMOD2 leiomodin 2 (cardiac) 7 123083096 BF438844 7q31.32 Hs.592260 6

actin binding

tropomyosin binding

cytoskeleton

 
208216_at 0.249 4.663 2.248 3.981e-02 0.362 -3.914 DLX4 distal-less homeobox 4 17 45401560, 45405128 NM_001934 17q21.33 Hs.591167 27

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

sequence-specific DNA binding

 
237257_at 0.343 7.260 2.248 3.981e-02 0.362 -3.914 RAB4B RAB4B, member RAS oncogene family 19 45976010 AI668580 19q13.2 Hs.631539 5

nucleotide binding

GTPase activity

GTP binding

intracellular

plasma membrane

small GTPase mediated signal transduction

protein transport

vesicle-mediated transport

 
205356_at -0.370 10.338 -2.248 3.981e-02 0.362 -3.914 USP13 ubiquitin specific peptidase 13 (isopeptidase T-3) 3 180853626 NM_003940 3q26.2-q26.3 Hs.175322 11

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

ubiquitin-dependent protein catabolic process

peptidase activity

zinc ion binding

metal ion binding

 
205147_x_at 0.323 4.177 2.248 3.984e-02 0.362 -3.915 NCF4 neutrophil cytosolic factor 4, 40kDa 22 35586975 NM_000631 22q13.1 Hs.474781 51

cytoplasm

cytosol

immune response

cell communication

membrane

phosphoinositide binding

NADPH oxidase complex

protein dimerization activity

oxidation reduction

Leukocyte transendothelial migration

210329_s_at -0.238 6.445 -2.247 3.991e-02 0.362 -3.917 SGCD sarcoglycan, delta (35kDa dystrophin-associated glycoprotein) 5 155686344, 155686344 U58331 5q33-q34 Hs.387207 Hs.644733 29

protein binding

cytoplasm

cytoskeleton

plasma membrane

cytoskeleton organization

muscle organ development

sarcoglycan complex

integral to membrane

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

218677_at 0.256 5.467 2.246 3.994e-02 0.362 -3.917 S100A14 S100 calcium binding protein A14 1 -151853355 NM_020672 1q21.3 Hs.288998 7

calcium ion binding

cytoplasm

 
204840_s_at -0.819 2.701 -2.246 3.994e-02 0.362 -3.917 EEA1 early endosome antigen 1 12 -91690415 AI916242 12q22 Hs.567367 32

calmodulin binding

phosphatidylinositol binding

intracellular

membrane fraction

cytoplasm

early endosome

cytosol

serine-pyruvate aminotransferase complex

vesicle fusion

zinc ion binding

membrane

synaptic vesicle to endosome fusion

extrinsic to plasma membrane

GTP-dependent protein binding

protein homodimerization activity

early endosome to late endosome transport

metal ion binding

Endocytosis

224867_at 0.267 10.403 2.246 3.994e-02 0.362 -3.917 C1orf151 chromosome 1 open reading frame 151 1 19796053 BF244614 1p36.13 Hs.466662 4

membrane

integral to membrane

 
214459_x_at 0.483 9.815 2.246 3.994e-02 0.362 -3.917 HLA-C major histocompatibility complex, class I, C 6 -31344507, -2686290, -2483726 M12679 6p21.3 Hs.654404 Hs.656020 Hs.77961 521

antigen processing and presentation of peptide antigen via MHC class I

extracellular region

plasma membrane

integral to plasma membrane

immune response

immune response

membrane

integral to membrane

antigen processing and presentation

MHC class I receptor activity

MHC class I protein complex

interspecies interaction between organisms

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

34406_at 0.310 7.568 2.246 3.996e-02 0.363 -3.918 PACS2 phosphofurin acidic cluster sorting protein 2 14 104852125 AB011174 14q32.33 Hs.525626 10

mitochondrion

endoplasmic reticulum

endoplasmic reticulum lumen

apoptosis

 
218894_s_at 0.259 4.628 2.246 3.996e-02 0.363 -3.918 MAGOHB mago-nashi homolog B (Drosophila) 12 -10648060 NM_018048 12p13.2 Hs.104650 6

RNA binding

nucleus

mRNA processing

transport

RNA splicing

mRNA transport

 
208331_at 0.254 2.663 2.246 3.999e-02 0.363 -3.918 BPY2 basic charge, Y-linked, 2 Y -25586437, 23539797, 25173538 NM_004678 Yq11 Hs.664724 7    
40093_at 0.238 6.833 2.246 4.000e-02 0.363 -3.918 BCAM basal cell adhesion molecule (Lutheran blood group) 19 50004177, 50004177 X83425 19q13.2 Hs.625725 31

laminin receptor activity

plasma membrane

integral to plasma membrane

cell adhesion

cell-matrix adhesion

signal transduction

external side of plasma membrane

laminin binding

 
218730_s_at 0.686 3.207 2.245 4.005e-02 0.363 -3.919 OGN osteoglycin 9 -94186069 NM_014057 9q22 Hs.109439 24

molecular_function

protein binding

extracellular region

proteinaceous extracellular matrix

endoplasmic reticulum

growth factor activity

biological_process

 
215493_x_at -0.325 6.499 -2.245 4.006e-02 0.363 -3.920 BTN2A1 butyrophilin, subfamily 2, member A1 6 26566167 AL121936 6p22.1 Hs.159028 7

molecular_function

integral to plasma membrane

lipid metabolic process

membrane

 
212402_at -0.431 7.285 -2.244 4.009e-02 0.363 -3.920 ZC3H13 zinc finger CCCH-type containing 13 13 -45434314 BE895685 13q14.13 Hs.136102 11

nucleic acid binding

zinc ion binding

metal ion binding

 
1553887_at 0.189 2.638 2.244 4.009e-02 0.363 -3.920 C19orf75 chromosome 19 open reading frame 75 19 56452775 NM_173635 19q13.41 Hs.381087 2

membrane

integral to membrane

 
214107_x_at -0.275 7.039 -2.244 4.010e-02 0.363 -3.921 LOC440434 hypothetical protein FLJ11822 17   AW340850 17q12 Hs.443837 Hs.655470 Hs.710586 2

aminopeptidase activity

proteolysis

peptidase activity

metallopeptidase activity

zinc ion binding

metal ion binding

 
227489_at -0.293 7.224 -2.244 4.010e-02 0.363 -3.921 SMURF2 SMAD specific E3 ubiquitin protein ligase 2 17 -59971196 BE962027 17q22-q23 Hs.705442 35

ubiquitin ligase complex

ubiquitin-protein ligase activity

intracellular

nucleus

cytoplasm

plasma membrane

protein modification process

negative regulation of transcription

ligase activity

acid-amino acid ligase activity

regulation of transforming growth factor beta receptor signaling pathway

BMP signaling pathway

ubiquitin-dependent SMAD protein catabolic process

identical protein binding

membrane raft

Ubiquitin mediated proteolysis

Endocytosis

TGF-beta signaling pathway

206296_x_at 0.223 5.331 2.244 4.011e-02 0.363 -3.921 MAP4K1 mitogen-activated protein kinase kinase kinase kinase 1 19 -43770120 NM_007181 19q13.1-q13.4 Hs.95424 29

nucleotide binding

activation of MAPKKK activity

protein serine/threonine kinase activity

small GTPase regulator activity

protein binding

ATP binding

response to stress

protein kinase cascade

activation of JUN kinase activity

MAP kinase kinase kinase kinase activity

transferase activity

peptidyl-serine phosphorylation

MAPK signaling pathway

243653_at 0.267 5.364 2.244 4.011e-02 0.363 -3.921 SHROOM3 shroom family member 3 4 77575276 AA236863 4q21.1 Hs.702168 Hs.716254 10

cell morphogenesis

neural tube closure

columnar/cuboidal epithelial cell development

actin binding

protein binding

cytoplasm

cytoskeleton

microtubule

adherens junction

pattern specification process

regulation of cell shape

apical plasma membrane

actin cytoskeleton organization

cell junction

apical junction complex

cellular pigment accumulation

apical protein localization

 
1558077_s_at 0.231 4.430 2.244 4.011e-02 0.363 -3.921 MDH1B malate dehydrogenase 1B, NAD (soluble) 2 -207310733 BG202523 2q33.3 Hs.147816 1

binding

carbohydrate metabolic process

tricarboxylic acid cycle

malate metabolic process

oxidoreductase activity

malate dehydrogenase activity

oxidation reduction

 
216127_at 0.236 5.166 2.244 4.012e-02 0.363 -3.921 PDIA2 protein disulfide isomerase family A, member 2 16 273118 Z84717 16p13.3 Hs.66581 30

response to hypoxia

protein disulfide isomerase activity

protein binding

endoplasmic reticulum

endoplasmic reticulum lumen

protein folding

protein retention in ER lumen

isomerase activity

cell redox homeostasis

 
206146_s_at 0.218 5.147 2.244 4.012e-02 0.363 -3.921 RHAG Rh-associated glycoprotein 6 -49680848 AF178841 6p21.1-p11 Hs.120950 35

plasma membrane

plasma membrane

integral to plasma membrane

transport

cellular ion homeostasis

ammonium transmembrane transporter activity

ammonium transmembrane transporter activity

carbon dioxide transport

ammonium transport

ammonium transport

ankyrin binding

ammonia transporter activity

 
223816_at 0.226 3.158 2.244 4.012e-02 0.363 -3.921 SLC46A2 solute carrier family 46, member 2 9 -114681021 AF242557 9q32 Hs.512668 8

plasma membrane

transport

cell surface

symporter activity

tetracycline:hydrogen antiporter activity

tetracycline transport

integral to membrane

response to antibiotic

 
204384_at -0.258 6.273 -2.244 4.012e-02 0.363 -3.921 GOLGA2 golgi autoantigen, golgin subfamily a, 2 9 -130057928 NM_004486 9q34.11 Hs.155827 45

protein binding

Golgi apparatus

membrane

 
218464_s_at -0.242 7.473 -2.244 4.013e-02 0.363 -3.921 C17orf63 chromosome 17 open reading frame 63 17 -24107122 NM_018182 17q11.2 Hs.564533 4    
221378_at 0.372 4.609 2.244 4.015e-02 0.363 -3.922 CER1 cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis) 9 -14709731 NM_005454 9p23-p22 Hs.248204 12

molecular_function

cytokine activity

protein binding

extracellular region

extracellular region

extracellular space

biological_process

negative regulation of cell proliferation

anterior/posterior axis specification

negative regulation of BMP signaling pathway

cell migration involved in gastrulation

Wnt signaling pathway

232013_at -0.278 3.153 -2.243 4.019e-02 0.363 -3.923 C9orf102 chromosome 9 open reading frame 102 9 97677720 AL133663 9q22.32 Hs.432364 4

nucleotide binding

DNA binding

helicase activity

ATP binding

nucleus

DNA repair

response to DNA damage stimulus

ATP-dependent helicase activity

hydrolase activity

 
209265_s_at -0.241 7.611 -2.243 4.019e-02 0.363 -3.923 METTL3 methyltransferase like 3 14 -21036121 BC001650 14q11.1 Hs.168799 8

RNA methylation

RNA binding

nucleus

nucleoplasm

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

methyltransferase activity

mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity

nuclear speck

transferase activity

 
242040_at 0.290 5.250 2.243 4.020e-02 0.363 -3.923 GCNT7 glucosaminyl (N-acetyl) transferase family member 7 20 -54499954 AW025411 20q13.2 Hs.655916  

Golgi apparatus

acetylglucosaminyltransferase activity

membrane

integral to membrane

transferase activity, transferring glycosyl groups

 
203041_s_at -0.461 6.775 -2.243 4.020e-02 0.363 -3.923 LAMP2 lysosomal-associated membrane protein 2 X -119454376, -119444030 J04183 Xq24 Hs.496684 52

membrane fraction

lysosomal membrane

late endosome

plasma membrane

plasma membrane

integral to membrane

platelet dense granule membrane

platelet dense granule membrane

Lysosome

1556907_at 0.248 2.573 2.243 4.023e-02 0.363 -3.923 ZNF474 zinc finger protein 474 5 121493113 BM979960 5q23.2 Hs.646680 3

intracellular

zinc ion binding

metal ion binding

 
224568_x_at -0.861 7.811 -2.243 4.023e-02 0.363 -3.923 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 11 65021808 AW005982 11q13.1 Hs.642877 Hs.714394 8    
204008_at 0.327 5.639 2.242 4.025e-02 0.363 -3.924 DNAL4 dynein, axonemal, light chain 4 22 -37504458 NM_005740 22q13.1 Hs.632766 11

microtubule motor activity

microtubule motor activity

centrosome

axonemal dynein complex

microtubule

plasma membrane

microtubule-based movement

ATPase activity, coupled

Huntington's disease

1563315_s_at -0.195 5.312 -2.242 4.026e-02 0.363 -3.924 ERICH1 glutamate-rich 1 8 -604199 BC016017 8p23.3 Hs.655310 4    
1553555_at 0.313 4.425 2.242 4.026e-02 0.363 -3.924 TAS2R38 taste receptor, type 2, member 38 7 -141318899 NM_176817 7q34 Hs.647085 29

receptor activity

G-protein coupled receptor activity

signal transduction

G-protein coupled receptor protein signaling pathway

membrane

integral to membrane

response to stimulus

sensory perception of taste

Taste transduction

201064_s_at -0.356 9.863 -2.242 4.027e-02 0.363 -3.924 PABPC4 poly(A) binding protein, cytoplasmic 4 (inducible form) 1 -39799071 NM_003819 1p32-p36 Hs.169900 17

nucleotide binding

RNA binding

protein binding

cytoplasm

RNA processing

RNA catabolic process

translation

blood coagulation

poly(A) RNA binding

poly(U) RNA binding

poly(C) RNA binding

 
208889_s_at 0.257 5.337 2.242 4.028e-02 0.363 -3.925 NCOR2 nuclear receptor co-repressor 2 12 -123374913 AI373205 12q24 Hs.137510 109

DNA binding

transcription corepressor activity

Notch binding

protein binding

nucleus

nucleolus

negative regulation of specific transcription from RNA polymerase II promoter

regulation of transcription

Notch signaling pathway

217821_s_at -0.343 5.997 -2.242 4.029e-02 0.363 -3.925 WBP11 WW domain binding protein 11 12 -14830678 AF118023 12p12.3 Hs.655138 13

single-stranded DNA binding

protein binding

nucleus

cytoplasm

rRNA processing

mRNA processing

RNA splicing

protein phosphatase type 1 regulator activity

nuclear speck

 
217885_at -0.261 7.351 -2.241 4.032e-02 0.363 -3.925 IPO9 importin 9 1 200064910 NM_018085 1q32.1 Hs.596014 12

protein import into nucleus, docking

nucleus

nuclear pore

cytoplasm

intracellular protein transport

Ran GTPase binding

protein transporter activity

histone binding

 
213569_at 0.273 5.432 2.241 4.034e-02 0.363 -3.926 ANGEL1 angel homolog 1 (Drosophila) 14 -76323338 AV705485 14q24.3 Hs.497448 5    
238140_at 0.371 3.468 2.241 4.034e-02 0.363 -3.926 ARV1 ARV1 homolog (S. cerevisiae) 1 229181445 AI346356 1q42.2 Hs.275736 6

lipid metabolic process

sphingolipid metabolic process

membrane

integral to membrane

 
215501_s_at -0.624 6.548 -2.241 4.035e-02 0.363 -3.926 DUSP10 dual specificity phosphatase 10 1 -219941388, -219941388 AK022513 1q41 Hs.497822 15

protein tyrosine phosphatase activity

nucleus

cytoplasm

protein amino acid dephosphorylation

response to stress

JNK cascade

hydrolase activity

MAP kinase tyrosine/serine/threonine phosphatase activity

MAPK signaling pathway

207117_at 0.481 2.631 2.241 4.036e-02 0.363 -3.926 ZNF117 zinc finger protein 117 7 -64072264 NM_015852 7q11.21 Hs.250693 5

molecular_function

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

biological_process

zinc ion binding

metal ion binding

 
1564367_at 0.307 3.900 2.241 4.036e-02 0.363 -3.926 CXorf25 chromosome X open reading frame 25 X   AK094108 Xp11.23 Hs.562045 1    
211381_x_at 0.333 3.590 2.241 4.038e-02 0.363 -3.927 SPAG11B sperm associated antigen 11B 8 -7306317, -7295495, -7295495, -7292685, 7742811 AF168617 8p23-p22 Hs.2717 10

molecular_function

extracellular region

spermatogenesis

 
244264_at 0.282 3.472 2.240 4.040e-02 0.364 -3.927 KLRG2 killer cell lectin-like receptor subfamily G, member 2 7 -138788627 AW197495 7q34 Hs.17572 2

binding

sugar binding

membrane

integral to membrane

 
221087_s_at 0.388 6.180 2.240 4.040e-02 0.364 -3.927 APOL3 apolipoprotein L, 3 22 -34866317, -34866317 NM_014349 22q13.1 Hs.474737 11

signal transducer activity

lipid transporter activity

extracellular region

cytoplasm

lipid transport

inflammatory response

lipid binding

lipoprotein metabolic process

positive regulation of I-kappaB kinase/NF-kappaB cascade

 
209909_s_at -0.830 2.853 -2.240 4.041e-02 0.364 -3.927 TGFB2 transforming growth factor, beta 2 1 216586013 M19154 1q41 Hs.133379 112

cell morphogenesis

skeletal system development

cartilage condensation

angiogenesis

beta-amyloid binding

blood vessel development

eye development

response to hypoxia

blood vessel remodeling

receptor signaling protein serine/threonine kinase activity

type II transforming growth factor beta receptor binding

type II transforming growth factor beta receptor binding

cytokine activity

extracellular region

extracellular region

extracellular region

extracellular space

induction of apoptosis

activation-induced cell death of T cells

cell cycle arrest

transforming growth factor beta receptor signaling pathway

SMAD protein nuclear translocation

cell-cell signaling

axon guidance

salivary gland morphogenesis

growth factor activity

cell death

positive regulation of cell proliferation

glial cell migration

embryonic development

positive regulation of epithelial cell migration

negative regulation of alkaline phosphatase activity

positive regulation of epithelial to mesenchymal transition

positive regulation of phosphoinositide 3-kinase cascade

menstrual cycle phase

hemopoiesis

collagen fibril organization

positive regulation of cell growth

negative regulation of cell growth

axon

neutrophil chemotaxis

neutrophil chemotaxis

extracellular matrix

hair follicle morphogenesis

platelet alpha granule lumen

activation of protein kinase activity

response to progesterone stimulus

positive regulation of stress-activated MAPK cascade

regulation of transforming growth factor-beta2 production

positive regulation of cell adhesion mediated by integrin

wound healing

dopamine biosynthetic process

odontogenesis

protein homodimerization activity

cell soma

positive regulation of neuron apoptosis

cell-cell junction organization

positive regulation of integrin biosynthetic process

positive regulation of ossification

positive regulation of cell cycle

positive regulation of heart contraction

protein heterodimerization activity

somatic stem cell division

neuron fate commitment

neuron development

generation of neurons

negative regulation of epithelial cell proliferation

negative regulation of epithelial cell proliferation

positive regulation of protein secretion

negative regulation of immune response

positive regulation of immune response

positive regulation of catagen

positive regulation of cardioblast differentiation

cardiac muscle cell proliferation

cardiac epithelial to mesenchymal transition

pathway-restricted SMAD protein phosphorylation

MAPK signaling pathway

Cytokine-cytokine receptor interaction

Cell cycle

TGF-beta signaling pathway

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Chronic myeloid leukemia

Hypertrophic cardiomyopathy (HCM)

201485_s_at -0.506 8.019 -2.240 4.041e-02 0.364 -3.927 RCN2 reticulocalbin 2, EF-hand calcium binding domain 15 75011016 BC004892 15q23 Hs.79088 10

calcium ion binding

protein binding

endoplasmic reticulum

endoplasmic reticulum lumen

 
206192_at 0.345 4.815 2.240 4.042e-02 0.364 -3.928 CDSN corneodesmosin 6 -31190848, -2534080, -2332634 L20815 6p21.3 Hs.556031 25

cornified envelope

molecular_function

extracellular region

epidermis development

cell-cell adhesion

desmosome

keratinocyte differentiation

protein homodimerization activity

 
202099_s_at 0.244 5.927 2.240 4.044e-02 0.364 -3.928 DGCR2 DiGeorge syndrome critical region gene 2 22 -17403794 H42875 22q11.21 Hs.517357 14

receptor activity

protein binding

sugar binding

microsome

cell adhesion

organ morphogenesis

membrane

integral to membrane

response to drug

 
208687_x_at -0.529 11.482 -2.240 4.045e-02 0.364 -3.928 HSPA8 heat shock 70kDa protein 8 11 -122433409 AF352832 11q24.1 Hs.702021 145

nucleotide binding

protein binding

ATP binding

intracellular

cytoplasm

protein folding

response to unfolded protein

cell surface

melanosome

ATPase activity, coupled

interspecies interaction between organisms

MAPK signaling pathway

Endocytosis

Antigen processing and presentation

213471_at -0.268 4.688 -2.240 4.045e-02 0.364 -3.928 NPHP4 nephronophthisis 4 1 -5845456 AB014573 1p36.22 Hs.462348 13

structural molecule activity

protein binding

centrosome

cilium

microtubule basal body

signal transduction

visual behavior

membrane

cell-cell adhesion

actin cytoskeleton organization

 
1554173_at 0.249 5.860 2.239 4.047e-02 0.364 -3.929 CD300LB CD300 molecule-like family member b 17 -70028907 BC028091 17q25.1 Hs.313343 5

receptor activity

plasma membrane

immune response

integral to membrane

 
207926_at 0.348 4.247 2.239 4.050e-02 0.364 -3.929 GP5 glycoprotein V (platelet) 3 -195596838 NM_004488 3q29 Hs.73734 22

protein binding

plasma membrane

plasma membrane

integral to plasma membrane

cell adhesion

blood coagulation

platelet alpha granule membrane

ECM-receptor interaction

Hematopoietic cell lineage

229230_at 0.217 3.513 2.239 4.050e-02 0.364 -3.929 OSTalpha organic solute transporter alpha 3 197427779 AA702685 3q29 Hs.630585 11

transporter activity

plasma membrane

transport

integral to membrane

 
227775_at 0.227 3.725 2.239 4.051e-02 0.364 -3.929 BRUNOL6 bruno-like 6, RNA binding protein (Drosophila) 15 -70364121 BE467313 15q24 Hs.348342 5

nucleotide binding

regulation of alternative nuclear mRNA splicing, via spliceosome

RNA binding

nucleus

cytoplasm

mRNA processing

 
222508_s_at -0.283 6.176 -2.239 4.051e-02 0.364 -3.930 ARGLU1 arginine and glutamate rich 1 13 -105993662 AU135021 13q33.3 Hs.508644 Hs.701016 3    
1555416_a_at 0.199 5.260 2.239 4.052e-02 0.364 -3.930 ALOX15B arachidonate 15-lipoxygenase, type B 17 7883082 AF468053 17p13.1 Hs.111256 18

iron ion binding

intracellular

intracellular

cytoplasm

lipid metabolic process

fatty acid metabolic process

induction of apoptosis

negative regulation of cell proliferation

negative regulation of cell proliferation

lipoxygenase activity

oxidoreductase activity

leukotriene biosynthetic process

negative regulation of cell migration

prostate gland development

regulation of epithelial cell differentiation

negative regulation of cell cycle

negative regulation of cell cycle

negative regulation of growth

negative regulation of growth

metal ion binding

arachidonate 15-lipoxygenase activity

arachidonate 15-lipoxygenase activity

oxidation reduction

Arachidonic acid metabolism

Metabolic pathways

223899_at 0.297 4.712 2.239 4.053e-02 0.364 -3.930 PBRM1 polybromo 1 3 -52554407, -52554407 AF225870 3p21 Hs.189920 19

nuclear chromosome

DNA binding

chromatin binding

protein binding

nucleus

chromatin remodeling

mitosis

regulation of transcription

 
217358_at 0.252 5.171 2.239 4.054e-02 0.364 -3.930 DNAJC16 DnaJ (Hsp40) homolog, subfamily C, member 16 1 15725938 AL137715 1p36.1 Hs.655410 6

protein folding

membrane

integral to membrane

heat shock protein binding

cell redox homeostasis

unfolded protein binding

 
203658_at 0.686 8.529 2.239 4.055e-02 0.364 -3.930 SLC25A20 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 3 -48869359 BC001689 3p21.31 Hs.13845 19

transporter activity

binding

mitochondrion

mitochondrial inner membrane

mitochondrial inner membrane

transport

carnitine shuttle

acyl carnitine transporter activity

membrane

integral to membrane

regulation of fatty acid oxidation

 
208653_s_at -0.493 4.221 -2.238 4.057e-02 0.364 -3.931 CD164 CD164 molecule, sialomucin 6 -109794411 AF263279 6q21 Hs.520313 Hs.644693 17

extracellular region

plasma membrane

integral to plasma membrane

immune response

cell adhesion

heterophilic cell adhesion

signal transduction

multicellular organismal development

negative regulation of cell proliferation

Lysosome

201970_s_at -0.266 6.740 -2.238 4.062e-02 0.364 -3.932 NASP nuclear autoantigenic sperm protein (histone-binding) 1 45822303 NM_002482 1p34.1 Hs.319334 28

blastocyst development

protein binding

nucleus

cytoplasm

DNA replication

cell cycle

cell proliferation

protein transport

histone exchange

Hsp90 protein binding

 
209203_s_at -0.512 6.425 -2.238 4.062e-02 0.364 -3.932 BICD2 bicaudal D homolog 2 (Drosophila) 9 -94513465 BC002327 9q22.31 Hs.436939 15

protein binding

cytoplasm

Golgi apparatus

cytoskeleton

transport

microtubule-based movement

 
221230_s_at -0.404 7.329 -2.237 4.065e-02 0.364 -3.932 ARID4B AT rich interactive domain 4B (RBP1-like) 1 -233396832 NM_016374 1q42.1-q43 Hs.533633 Hs.575782 12

chromatin

molecular_function

DNA binding

chromatin binding

cellular_component

intracellular

nucleus

cytoplasm

chromatin assembly or disassembly

biological_process

regulation of transcription

 
239027_at 0.255 5.431 2.237 4.065e-02 0.364 -3.933 DOCK8 dedicator of cytokinesis 8 9 204864 AV760561 9p24.3 Hs.132599 11

guanyl-nucleotide exchange factor activity

GTP binding

GTPase binding

 
232572_at 0.298 2.945 2.237 4.067e-02 0.364 -3.933 PCA3 prostate cancer antigen 3 (non-protein coding) 9 78569173 AF103907 9q21-q22 Hs.663766 11    
240275_at 0.258 3.827 2.237 4.069e-02 0.364 -3.933 ARMC3 armadillo repeat containing 3 10 23256959 AI936559 10p12.31 Hs.659807 4

binding

 
208089_s_at -0.472 5.503 -2.237 4.070e-02 0.364 -3.934 TDRD3 tudor domain containing 3 13 59868591, 59869427 NM_030794 13q21.2 Hs.525061 12

nucleic acid binding

nucleus

cytoplasm

 
206462_s_at -0.283 2.874 -2.237 4.070e-02 0.364 -3.934 NTRK3 neurotrophic tyrosine kinase, receptor, type 3 15 -86321598, -86220991 NM_002530 15q25 Hs.410969 Hs.706364 72

nucleotide binding

transmembrane receptor protein tyrosine kinase activity

receptor activity

protein binding

ATP binding

integral to plasma membrane

protein amino acid phosphorylation

transmembrane receptor protein tyrosine kinase signaling pathway

multicellular organismal development

nervous system development

membrane

transferase activity

cell differentiation

neurotrophin binding

Neurotrophin signaling pathway

210427_x_at -0.603 9.499 -2.236 4.073e-02 0.365 -3.934 ANXA2 annexin A2 15 -58426642, -58426641 BC001388 15q21-q22 Hs.511605 137

skeletal system development

angiogenesis

phospholipase inhibitor activity

calcium ion binding

calcium-dependent phospholipid binding

phosphatidylinositol-4,5-bisphosphate binding

extracellular region

basement membrane

soluble fraction

cytoplasm

early endosome

cytoskeletal protein binding

collagen fibril organization

sarcolemma

melanosome

fibrinolysis

protein complex

perinuclear region of cytoplasm

 
210119_at 0.389 3.506 2.236 4.074e-02 0.365 -3.934 KCNJ15 potassium inwardly-rectifying channel, subfamily J, member 15 21 38550533, 38550739, 38566298 U73191 21q22.2 Hs.411299 18

inward rectifier potassium channel activity

voltage-gated ion channel activity

potassium channel activity

protein binding

cytoplasm

plasma membrane

integral to plasma membrane

focal adhesion

ion transport

potassium ion transport

potassium ion binding

 
215734_at 0.319 4.771 2.236 4.075e-02 0.365 -3.935 C19orf36 chromosome 19 open reading frame 36 19 2047867 AW182303 19p13.3 Hs.424049 3

extracellular region

 
235792_x_at 0.299 5.251 2.236 4.078e-02 0.365 -3.935 PIK3C2A phosphoinositide-3-kinase, class 2, alpha polypeptide 11 -17064699 AU154663 11p15.5-p14 Hs.175343 39

nucleotide binding

inositol or phosphatidylinositol kinase activity

protein binding

ATP binding

nucleus

cytoplasm

Golgi apparatus

plasma membrane

phosphoinositide 3-kinase complex

phosphatidylinositol biosynthetic process

cell communication

1-phosphatidylinositol-3-kinase activity

transferase activity

phosphotransferase activity, alcohol group as acceptor

clathrin-coated vesicle

cytoplasmic vesicle

phosphatidylinositol-4-phosphate 3-kinase activity

phosphoinositide binding

phosphoinositide phosphorylation

phosphoinositide-mediated signaling

Inositol phosphate metabolism

Metabolic pathways

Phosphatidylinositol signaling system

225258_at 0.368 6.066 2.235 4.079e-02 0.365 -3.936 FBLIM1 filamin binding LIM protein 1 1 15957841, 15963580, 15964045 AL133035 1p36.21 Hs.530101 16

protein binding

cytoplasm

cytoskeleton

focal adhesion

cell cortex

cell adhesion

zinc ion binding

regulation of cell shape

cell junction

metal ion binding

 
232620_at 0.324 6.406 2.235 4.079e-02 0.365 -3.936 WDR93 WD repeat domain 93 15 88035031 AL390084 15q26.1 Hs.177557 2    
211938_at -0.254 10.524 -2.235 4.081e-02 0.365 -3.936 EIF4B eukaryotic translation initiation factor 4B 12 51686328 BF247371 12q13.13 Hs.648394 Hs.702041 23

nucleotide binding

RNA binding

translation initiation factor activity

cytosol

translation

regulation of translational initiation

eukaryotic translation initiation factor 4F complex

mTOR signaling pathway

214482_at -0.315 5.218 -2.235 4.082e-02 0.365 -3.936 ZBTB25 zinc finger and BTB domain containing 25 14 -64023307 NM_006977 14q23-q24 Hs.654571 6

transcription factor activity

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
212154_at -0.661 5.055 -2.235 4.083e-02 0.365 -3.936 SDC2 syndecan 2 8 97575057 AI380298 8q22-q23 Hs.1501 Hs.598247 72

molecular_function

integral to plasma membrane

cytoskeletal protein binding

biological_process

membrane

ECM-receptor interaction

Cell adhesion molecules (CAMs)

236640_at 0.422 4.774 2.235 4.084e-02 0.365 -3.936 LOC399959 hypothetical LOC399959 11 -121465022 AI638169 11q24.1 Hs.44098 2    
1598_g_at 0.395 8.594 2.235 4.084e-02 0.365 -3.937 GAS6 growth arrest-specific 6 13 113546896, 113574925, 113577228 L13720 13q34 Hs.646346 45

receptor binding

calcium ion binding

extracellular region

signal transduction

cell proliferation

organ regeneration

regulation of growth

 
214543_x_at -0.397 8.054 -2.235 4.086e-02 0.365 -3.937 QKI quaking homolog, KH domain RNA binding (mouse) 6 163755664, 163755664 AF142421 6q26 6q26-q27 Hs.510324 Hs.593520 23

RNA binding

protein binding

nucleus

nucleolus

cytoplasm

plasma membrane

mRNA processing

regulation of translation

transport

multicellular organismal development

RNA splicing

SH3 domain binding

cell differentiation

mRNA transport

 
234698_at 0.243 4.887 2.234 4.088e-02 0.365 -3.937 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 (putative) 21 -29166383 AK021678 21q21.3 Hs.163846 6

nucleic acid binding

protein binding

protein methyltransferase activity

transferase activity

positive regulation of cell growth

methylation

protein complex

 
1554476_x_at 0.414 3.806 2.234 4.089e-02 0.365 -3.938 ZNF808 zinc finger protein 808 19 57722720 BC033230 19q13.41 Hs.235167 2

DNA binding

intracellular

nucleus

transcription

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
207064_s_at 0.272 4.253 2.234 4.090e-02 0.365 -3.938 AOC2 amine oxidase, copper containing 2 (retina-specific) 17 38250134 NM_009590 17q21 Hs.143102 5

copper ion binding

calcium ion binding

catecholamine metabolic process

visual perception

amine oxidase activity

electron carrier activity

amine metabolic process

oxidoreductase activity

quinone binding

oxidation reduction

Glycine, serine and threonine metabolism

Tyrosine metabolism

Phenylalanine metabolism

beta-Alanine metabolism

Isoquinoline alkaloid biosynthesis

Tropane, piperidine and pyridine alkaloid biosynthesis

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Metabolic pathways

228101_at 0.278 5.045 2.234 4.090e-02 0.365 -3.938 APBA1 amyloid beta (A4) precursor protein-binding, family A, member 1 9 -71232268 AI693178 9q13-q21.1 Hs.171939 Hs.592974 35

in utero embryonic development

protein binding

protein complex assembly

intracellular protein transport

cell adhesion

synaptic transmission

nervous system development

locomotory behavior

synaptic vesicle

axon cargo transport

regulation of gene expression

glutamate secretion

gamma-aminobutyric acid secretion

multicellular organism growth

 
215145_s_at 0.236 4.045 2.234 4.092e-02 0.365 -3.938 CNTNAP2 contactin associated protein-like 2 7 145444385 AC005378 7q35-q36 Hs.655684 27

receptor binding

cell adhesion

signal transduction

neuron recognition

membrane

integral to membrane

transmission of nerve impulse

Cell adhesion molecules (CAMs)

212731_at -0.467 8.864 -2.233 4.095e-02 0.365 -3.939 ANKRD46 ankyrin repeat domain 46 8 -101602175 U79297 8q22.2 Hs.530199 5

membrane

integral to membrane

 
205512_s_at -0.370 8.186 -2.233 4.097e-02 0.365 -3.939 AIFM1 apoptosis-inducing factor, mitochondrion-associated, 1 X -129091019, -129091019, -129091018 NM_004208 Xq25-q26 Hs.424932 58

DNA binding

protein binding

nucleus

cytoplasm

mitochondrion

mitochondrial intermembrane space

DNA fragmentation involved in apoptosis

apoptosis

DNA damage response, signal transduction resulting in induction of apoptosis

electron carrier activity

oxidoreductase activity

cell redox homeostasis

FAD binding

oxidation reduction

Apoptosis

237350_at 0.280 5.861 2.233 4.097e-02 0.365 -3.939 TTC36 tetratricopeptide repeat domain 36 11 117903419 AW027968 11q23.3 Hs.653449 2    
230206_at -0.293 5.000 -2.233 4.101e-02 0.366 -3.940 DOCK5 dedicator of cytokinesis 5 8 25098203 AI692645 8p21.2 Hs.195403 7

guanyl-nucleotide exchange factor activity

cytoplasm

 
211285_s_at -0.331 9.439 -2.232 4.103e-02 0.366 -3.941 UBE3A ubiquitin protein ligase E3A 15 -23133488, -23133488, -23133488 U84404 15q11-q13 Hs.598862 76

ubiquitin-protein ligase activity

protein binding

intracellular

nucleus

cytosol

protein modification process

proteolysis

ubiquitin-dependent protein catabolic process

brain development

protein ubiquitination

ligase activity

acid-amino acid ligase activity

protein complex

interspecies interaction between organisms

Ubiquitin mediated proteolysis

223577_x_at -0.441 7.366 -2.232 4.103e-02 0.366 -3.941 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 11 65021808 AA827878 11q13.1 Hs.642877 Hs.714394 8    
1565795_at 0.334 4.078 2.232 4.105e-02 0.366 -3.941 DUOX1 dual oxidase 1 15 43209483 BI768821 15q15.3 Hs.272813 28

peroxidase activity

calcium ion binding

plasma membrane

response to oxidative stress

electron carrier activity

integral to membrane

NAD(P)H oxidase activity

apical plasma membrane

oxidoreductase activity

cytokine-mediated signaling pathway

heme binding

cuticle development

hormone biosynthetic process

superoxide anion generation

hydrogen peroxide catabolic process

FAD binding

NADP or NADPH binding

hydrogen peroxide biosynthetic process

response to cAMP

response to cAMP

oxidation reduction

 
1569949_at -0.664 8.496 -2.232 4.108e-02 0.366 -3.942 GRK5 G protein-coupled receptor kinase 5 10 120957186 BC018116 10q24-qter Hs.524625 38

nucleotide binding

G-protein coupled receptor kinase activity

signal transducer activity

protein kinase C binding

protein binding

ATP binding

phospholipid binding

soluble fraction

cytoplasm

plasma membrane

protein amino acid phosphorylation

signal transduction

G-protein signaling, coupled to cAMP nucleotide second messenger

tachykinin receptor signaling pathway

regulation of G-protein coupled receptor protein signaling pathway

transferase activity

Chemokine signaling pathway

Endocytosis

211237_s_at 0.197 6.251 2.231 4.110e-02 0.366 -3.942 FGFR4 fibroblast growth factor receptor 4 5 176446526, 176449156 AF202063 5q35.1-qter Hs.165950 90

nucleotide binding

induction of an organ

receptor activity

fibroblast growth factor receptor activity

ATP binding

plasma membrane

integral to plasma membrane

protein amino acid phosphorylation

fibroblast growth factor receptor signaling pathway

transferase activity

lung development

MAPK signaling pathway

Endocytosis

Regulation of actin cytoskeleton

211323_s_at 0.401 4.727 2.231 4.110e-02 0.366 -3.942 ITPR1 inositol 1,4,5-triphosphate receptor, type 1 3 4510033 L38019 3p26-p25 Hs.567295 Hs.715765 87

response to hypoxia

ion channel activity

inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity

calcium channel activity

calcium channel activity

calcium ion binding

protein binding

endoplasmic reticulum

ion transport

calcium ion transport

signal transduction

cell death

calcium ion transmembrane transporter activity

membrane

integral to membrane

platelet dense granule membrane

platelet dense tubular network membrane

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Gap junction

Long-term potentiation

Long-term depression

GnRH signaling pathway

Alzheimer's disease

Huntington's disease

205950_s_at 0.362 6.433 2.231 4.111e-02 0.366 -3.942 CA1 carbonic anhydrase I 8 -86427709, -86427709 NM_001738 8q13-q22.1 Hs.23118 30

carbonate dehydratase activity

cytoplasm

one-carbon metabolic process

zinc ion binding

lyase activity

metal ion binding

Nitrogen metabolism

1566277_at 0.287 3.446 2.231 4.115e-02 0.366 -3.943 OR5E1P olfactory receptor, family 5, subfamily E, member 1 pseudogene 11 7827173 AF309699 11p15.4 Hs.382973 2    
207490_at -0.318 6.786 -2.231 4.116e-02 0.366 -3.943 TUBA4B tubulin, alpha 4b (pseudogene) 2 219826208 NM_025019 2q35 Hs.664469 7

nucleotide binding

GTPase activity

structural molecule activity

GTP binding

microtubule

microtubule-based movement

protein complex

protein polymerization

 
233656_s_at -0.356 5.605 -2.231 4.116e-02 0.366 -3.943 VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) 2 -63973170 AL359939 2p13-p14 Hs.48499 8

protein binding

protein transport

retrograde transport, endosome to Golgi

 
208122_x_at 0.287 4.461 2.230 4.118e-02 0.366 -3.944 KIR2DS3 killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 3 19 240823 NM_012313 19q13.4 Hs.714920 44

receptor activity

plasma membrane

integral to plasma membrane

cellular defense response

Antigen processing and presentation

Natural killer cell mediated cytotoxicity

209586_s_at -0.335 7.584 -2.230 4.119e-02 0.366 -3.944 PRUNE prune homolog (Drosophila) 1 149247596 AF123539 1q21 Hs.78524 8

inorganic diphosphatase activity

protein binding

nucleus

cytoplasm

focal adhesion

hydrolase activity

cell junction

manganese ion binding

metal ion binding

Purine metabolism

204196_x_at 0.252 3.483 2.230 4.121e-02 0.366 -3.944 PKNOX1 PBX/knotted 1 homeobox 1 21 43267711 NM_004571 21q22.3 Hs.431043 25

angiogenesis

specific RNA polymerase II transcription factor activity

RNA polymerase II transcription factor activity, enhancer binding

protein binding

nucleus

transcription factor complex

cytoplasm

hemopoiesis

T cell differentiation

erythrocyte differentiation

camera-type eye development

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

protein heterodimerization activity

 
210164_at 0.376 4.117 2.230 4.121e-02 0.366 -3.945 GZMB granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1) 14 -24170003 J03189 14q11.2 Hs.1051 142

immunological synapse

serine-type endopeptidase activity

protein binding

nucleus

cytoplasm

cytosol

proteolysis

apoptosis

cleavage of lamin

peptidase activity

cytolysis

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

1553832_at 0.199 6.127 2.230 4.124e-02 0.366 -3.945 C21orf93 chromosome 21 open reading frame 93 21   NM_145179 21q22.3 Hs.171428 1    
226650_at -0.431 6.071 -2.230 4.125e-02 0.366 -3.945 ZFAND2A zinc finger, AN1-type domain 2A 7 -1159069 AI984061 7p22.3 Hs.648111 2

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
233959_at 0.379 4.603 2.229 4.127e-02 0.366 -3.946 LOC221442 adenylate cyclase 10 pseudogene 6 41176750 W26606 6p21.1 Hs.374076 1    
209485_s_at -0.281 9.487 -2.229 4.128e-02 0.366 -3.946 OSBPL1A oxysterol binding protein-like 1A 18 -19996008, -19996008 W19983 18q11.1 Hs.370725 12

phospholipid binding

intracellular

lipid transport

steroid metabolic process

cholesterol metabolic process

vesicle-mediated transport

 
228126_x_at 0.223 4.605 2.229 4.128e-02 0.366 -3.946 CTXN1 cortexin 1 19 -7895380 BF982289 19p13.2 Hs.657978 3

membrane

integral to membrane

 
203162_s_at 0.358 6.274 2.229 4.129e-02 0.366 -3.946 KATNB1 katanin p80 (WD repeat containing) subunit B 1 16 56327160 NM_005886 16q21 Hs.275675 14

spindle pole

cytoplasm

cytoskeleton

microtubule

protein targeting

negative regulation of microtubule depolymerization

cell cycle

mitosis

microtubule binding

katanin complex

microtubule-severing ATPase activity

axon

positive regulation of microtubule depolymerization

dynein binding

protein heterodimerization activity

cell division

 
226586_at 0.248 6.132 2.229 4.129e-02 0.366 -3.946 ANKS6 ankyrin repeat and sterile alpha motif domain containing 6 9 -100534111 AW130559 9q22.33 Hs.406890 7    
203631_s_at 0.311 4.806 2.229 4.130e-02 0.366 -3.946 GPRC5B G protein-coupled receptor, family C, group 5, member B 16 -19777793 AF202640 16p12 Hs.148685 8

receptor activity

G-protein coupled receptor activity

nucleus

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

integral to membrane

cytoplasmic vesicle

 
228627_at -0.381 5.739 -2.229 4.131e-02 0.366 -3.947 TLK2 tousled-like kinase 2 17 57910117 AL041560 17q23 Hs.445078 10

nucleotide binding

regulation of chromatin assembly or disassembly

protein serine/threonine kinase activity

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

nucleus

protein amino acid phosphorylation

response to DNA damage stimulus

cell cycle

intracellular signaling cascade

chromatin modification

transferase activity

 
226703_at 0.203 6.685 2.229 4.131e-02 0.366 -3.947 NEURL4 neuralized homolog 4 (Drosophila) 17 -7159674 AL136870 17p13 Hs.654794 3

protein binding

 
207511_s_at -0.323 5.553 -2.229 4.133e-02 0.366 -3.947 C2orf24 chromosome 2 open reading frame 24 2 -219744862 NM_015680 2q35 Hs.4973 5

membrane

integral to membrane

 
201634_s_at -0.626 6.283 -2.229 4.133e-02 0.366 -3.947 CYB5B cytochrome b5 type B (outer mitochondrial membrane) 16 68015998 NM_030579 16q22.1 Hs.461131 7

mitochondrion

mitochondrial outer membrane

mitochondrial inner membrane

microsome

transport

enzyme activator activity

membrane

integral to membrane

heme binding

electron transport chain

metal ion binding

 
221149_at 0.289 3.298 2.229 4.133e-02 0.366 -3.947 GPR77 G protein-coupled receptor 77 19 52532210 NM_018485 19q13.33 Hs.534412 13

receptor activity

G-protein coupled receptor activity

C5a anaphylatoxin receptor activity

cellular_component

plasma membrane

chemotaxis

signal transduction

G-protein coupled receptor protein signaling pathway

biological_process

integral to membrane

 
201335_s_at -0.464 4.099 -2.228 4.134e-02 0.366 -3.947 ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 11 119713155 NM_015313 11q23.3 Hs.24598 26

G-protein-coupled receptor binding

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

GTPase activator activity

protein binding

intracellular

cytoplasm

G-protein coupled receptor protein signaling pathway

intracellular signaling cascade

membrane

regulation of Rho protein signal transduction

Vascular smooth muscle contraction

Axon guidance

Regulation of actin cytoskeleton

206868_at 0.247 6.167 2.228 4.134e-02 0.366 -3.947 STARD8 StAR-related lipid transfer (START) domain containing 8 X 67784235, 67830217 NM_014725 Xq13.1 Hs.95140 8

GTPase activator activity

intracellular

focal adhesion

signal transduction

cell junction

 
1552676_at 0.418 4.901 2.228 4.135e-02 0.366 -3.947 UCN3 urocortin 3 (stresscopin) 10 5396975 NM_053049 10p15.1 Hs.511775 14

hormone activity

protein binding

extracellular region

activation of adenylate cyclase activity by G-protein signaling pathway

 
209746_s_at -0.259 7.095 -2.228 4.135e-02 0.366 -3.947 COQ7 coenzyme Q7 homolog, ubiquinone (yeast) 16 18986427 AF032900 16p13.11-p12.3 Hs.157113 18

iron ion binding

nucleus

mitochondrion

ubiquinone biosynthetic process

oxidoreductase activity

protein metabolic process

Ubiquinone and other terpenoid-quinone biosynthesis

Metabolic pathways

1553718_at 0.365 6.949 2.228 4.135e-02 0.366 -3.947 ZNF548 zinc finger protein 548 19 62593029 NM_152909 19q13.43 Hs.657353 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
240409_at 0.315 3.169 2.228 4.135e-02 0.366 -3.947 SUGT1L1 SGT1, suppressor of G2 allele of SKP1 like 1 (S. cerevisiae) 13 -40269126 AI203405 13q14.11 Hs.442781 Hs.709973 2    
206015_s_at -0.362 8.121 -2.228 4.136e-02 0.366 -3.948 FOXJ3 forkhead box J3 1 -42414796 NM_014947 1pter-q31.3 Hs.26023 4

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

sequence-specific DNA binding

 
213292_s_at -0.371 6.843 -2.228 4.137e-02 0.366 -3.948 SNX13 sorting nexin 13 7 -17796910 AA908770 7p21.1 Hs.487648 10

signal transducer activity

protein binding

cell communication

negative regulation of signal transduction

protein transport

phosphoinositide binding

 
219605_at 0.274 4.909 2.228 4.140e-02 0.367 -3.948 ZNF3 zinc finger protein 3 7 -99505529, -99499588 NM_017715 7q22.1 Hs.435302 10

transcription factor activity

intracellular

nucleus

nucleus

nucleolus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

cell differentiation

identical protein binding

leukocyte activation

metal ion binding

 
203077_s_at -0.471 6.729 -2.227 4.144e-02 0.367 -3.949 SMAD2 SMAD family member 2 18 -43613464, -43613463, -43613463 NM_005901 18q21.1 Hs.12253 Hs.705764 206

mesoderm formation

double-stranded DNA binding

transcription factor activity

intracellular

nucleus

nucleoplasm

cytoplasm

cytosol

SMAD protein complex assembly

intracellular signaling cascade

zygotic determination of dorsal/ventral axis

gastrulation

transcription factor binding

anterior/posterior pattern formation

positive regulation of epithelial to mesenchymal transition

promoter binding

transcription activator activity

regulation of transforming growth factor beta receptor signaling pathway

transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity

primary microRNA processing

ubiquitin protein ligase binding

activin responsive factor complex

type I transforming growth factor beta receptor binding

positive regulation of gene-specific transcription

cell fate commitment

negative regulation of transcription, DNA-dependent

positive regulation of transcription from RNA polymerase II promoter

paraxial mesoderm morphogenesis

regulation of binding

palate development

co-SMAD binding

R-SMAD binding

response to cholesterol

Cell cycle

Wnt signaling pathway

TGF-beta signaling pathway

Adherens junction

Pathways in cancer

Colorectal cancer

Pancreatic cancer

1569909_at 0.305 4.352 2.227 4.145e-02 0.367 -3.949 KRT79 keratin 79 12 -51501497 BC039148 12q13.13 Hs.711471 3

structural molecule activity

keratin filament

 
225283_at -0.719 6.974 -2.227 4.145e-02 0.367 -3.949 ARRDC4 arrestin domain containing 4 15 96304936 AV701177 15q26.3 Hs.6093 6    
224938_at -0.274 7.096 -2.227 4.147e-02 0.367 -3.950 NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 17 -24606979 AW007746 17q11.2 Hs.462598 13

RNA binding

protein binding

nucleus

cytoplasm

Golgi apparatus

polysomal ribosome

 
202769_at -0.978 6.876 -2.227 4.148e-02 0.367 -3.950 CCNG2 cyclin G2 4 78297380 AW134535 4q21.1 Hs.13291 12

cell cycle checkpoint

cytoplasm

cell cycle

mitosis

cell division

p53 signaling pathway

223792_at 0.274 5.271 2.227 4.149e-02 0.367 -3.950 ZNF2 zinc finger protein 2 2 95194909 BC005068 2q11.2 Hs.590916 7

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
217780_at -0.273 9.161 -2.226 4.150e-02 0.367 -3.951 C19orf56 chromosome 19 open reading frame 56 19 -12639880 NM_016145 19p13.2 Hs.108969 Hs.657204 4

membrane

integral to membrane

 
224992_s_at 0.257 4.934 2.226 4.156e-02 0.368 -3.952 CMIP c-Maf-inducing protein 16 80036275, 80086454 AI363061 16q23 Hs.709248 7

nucleus

cytoplasm

 
219504_s_at -0.265 5.810 -2.225 4.158e-02 0.368 -3.952 RPAP2 RNA polymerase II associated protein 2 1 92537109 NM_024813 1p22.1 Hs.444421 7

membrane

integral to membrane

 
217788_s_at -0.353 8.078 -2.225 4.163e-02 0.368 -3.953 GALNT2 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2) 1 228269578 NM_004481 1q41-q42 Hs.716384 24

immunoglobulin biosynthetic process

polypeptide N-acetylgalactosaminyltransferase activity

calcium ion binding

sugar binding

extracellular region

Golgi apparatus

Golgi stack

membrane

integral to membrane

transferase activity, transferring glycosyl groups

protein amino acid O-linked glycosylation via serine

protein amino acid O-linked glycosylation via threonine

manganese ion binding

integral to Golgi membrane

perinuclear region of cytoplasm

O-Glycan biosynthesis

Metabolic pathways

1560765_a_at 0.280 5.035 2.225 4.163e-02 0.368 -3.953 ARHGAP22 Rho GTPase activating protein 22 10 -49324084 BC043540 10q11.22 Hs.655672 5

angiogenesis

GTPase activator activity

intracellular

nucleus

cytoplasm

signal transduction

multicellular organismal development

cell differentiation

regulation of transcription

 
217765_at -0.400 7.022 -2.225 4.164e-02 0.368 -3.954 NRBP1 nuclear receptor binding protein 1 2 27504976 NM_013392 2p23 Hs.515876 18

protein kinase activity

protein binding

ATP binding

cytoplasm

cell cortex

protein amino acid phosphorylation

ER to Golgi vesicle-mediated transport

endomembrane system

membrane

lamellipodium

protein homodimerization activity

perinuclear region of cytoplasm

 
233801_s_at 0.325 5.443 2.225 4.165e-02 0.368 -3.954 SEMA6D sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D 15 45797977, 45797977 AK022747 15q21.1 Hs.511265 8

receptor activity

cytoplasm

plasma membrane

multicellular organismal development

nervous system development

integral to membrane

cell differentiation

Axon guidance

1559942_at -0.422 4.414 -2.224 4.167e-02 0.368 -3.954 MDFIC MyoD family inhibitor domain containing 7 114349444 BC040713 7q31.1-q31.2 Hs.427236 7

nucleus

nucleolus

cytoplasm

activation of JUN kinase activity

regulation of Wnt receptor signaling pathway

cyclin binding

Tat protein binding

interspecies interaction between organisms

regulation of transcription

positive regulation of viral transcription

 
233795_at 0.298 5.336 2.224 4.169e-02 0.368 -3.955 ODF3 outer dense fiber of sperm tails 3 11 186760 AL133658 11p15.5 Hs.350949 2

outer dense fiber

cytoplasm

multicellular organismal development

spermatogenesis

cell differentiation

 
233261_at 0.385 3.599 2.224 4.171e-02 0.368 -3.955 EBF1 early B-cell factor 1 5 -158055500 AU145682 5q34 Hs.573143 21

DNA binding

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

transcription regulator activity

metal ion binding

 
213764_s_at -0.962 7.179 -2.224 4.172e-02 0.368 -3.955 MFAP5 microfibrillar associated protein 5 12 -8689806 AW665892 12p13.1-p12.3 Hs.512842 9

microfibril

extracellular matrix structural constituent

extracellular region

proteinaceous extracellular matrix

 
222079_at 0.230 4.335 2.224 4.173e-02 0.368 -3.955 ERG v-ets erythroblastosis virus E26 oncogene homolog (avian) 21 -38673821, -38673821 BF739971 21q22.3 Hs.473819 66

transcription factor activity

signal transducer activity

protein binding

nucleus

regulation of transcription, DNA-dependent

protein amino acid phosphorylation

signal transduction

multicellular organismal development

cell proliferation

sequence-specific DNA binding

 
233051_at 0.403 4.617 2.223 4.174e-02 0.368 -3.956 SLITRK2 SLIT and NTRK-like family, member 2 X 144707038, 144710703 AL109653 Xq27.3 Hs.320368 10

protein binding

axonogenesis

membrane

integral to membrane

 
224606_at -0.396 7.421 -2.223 4.176e-02 0.368 -3.956 KLF6 Kruppel-like factor 6 10 -3808188 BG250721 10p15 Hs.4055 Hs.709396 71

double-stranded DNA binding

transcription factor activity

intracellular

nucleus

cytoplasm

regulation of transcription, DNA-dependent

zinc ion binding

transcription activator activity

cytokine-mediated signaling pathway

B cell differentiation

wound healing

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

 
221325_at 0.175 4.524 2.223 4.177e-02 0.368 -3.956 KCNK13 potassium channel, subfamily K, member 13 14 89597860 NM_022054 14q31-q32 Hs.510191 8

voltage-gated ion channel activity

potassium channel activity

ion transport

potassium ion transport

membrane

integral to membrane

potassium ion binding

 
1553117_a_at -0.334 3.728 -2.223 4.181e-02 0.369 -3.957 STK38 serine/threonine kinase 38 6 -36569646 NM_007271 6p21 Hs.409578 21

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

cytoplasm

protein modification process

protein amino acid phosphorylation

protein kinase cascade

transferase activity

MLL5-L complex

 
203022_at 0.379 5.552 2.222 4.182e-02 0.369 -3.957 RNASEH2A ribonuclease H2, subunit A 19 12778427 NM_006397 19p13.2 Hs.532851 8

RNA binding

endonuclease activity

ribonuclease H activity

ribonuclease activity

nucleus

DNA replication

RNA catabolic process

hydrolase activity

metal ion binding

DNA replication

227067_x_at -0.430 5.871 -2.222 4.184e-02 0.369 -3.958 NOTCH2NL Notch homolog 2 (Drosophila) N-terminal like 1 143920467 AW024960 1q21.2 Hs.655156 Hs.683989 Hs.709526 5

calcium ion binding

extracellular region

cytoplasm

Notch signaling pathway

multicellular organismal development

cell differentiation

 
32541_at -0.339 7.208 -2.222 4.184e-02 0.369 -3.958 PPP3CC protein phosphatase 3 (formerly 2B), catalytic subunit, gamma isoform 8 22354540 S46622 8p21.3 Hs.655661 21

phosphoprotein phosphatase activity

iron ion binding

calmodulin binding

cytosol

zinc ion binding

activation of pro-apoptotic gene products

hydrolase activity

metal ion binding

MAPK signaling pathway

Calcium signaling pathway

Apoptosis

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Long-term potentiation

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

205796_at -0.319 3.406 -2.222 4.186e-02 0.369 -3.958 TCP11L1 t-complex 11 (mouse)-like 1 11 33017538, 33018136 NM_018393 11p13 Hs.655341 4    
226509_at -0.554 6.918 -2.222 4.187e-02 0.369 -3.958 ZNF641 zinc finger protein 641 12 -47022178 AV700302 12q13.11 Hs.23492 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
220637_at 0.281 3.950 2.221 4.190e-02 0.369 -3.959 FAM124B family with sequence similarity 124B 2 -224951658 NM_024785 2q36.2 Hs.147585 3

protein binding

 
223019_at 0.272 6.214 2.221 4.191e-02 0.369 -3.959 FAM129B family with sequence similarity 129, member B 9 -129307438, -129307438 BC001979 9q33.3-q34.11 Hs.522401 8    
239824_s_at 0.457 4.861 2.221 4.192e-02 0.369 -3.959 TMEM107 transmembrane protein 107 17 -8017020 BF971873 17p13.1 Hs.513933 4

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
1558426_x_at 0.281 7.256 2.221 4.193e-02 0.369 -3.959 ORAI2 ORAI calcium release-activated calcium modulator 2 7 101861000 BC016797 7q22.1 Hs.363308 12

membrane

integral to membrane

 
230394_at 0.253 4.407 2.221 4.196e-02 0.369 -3.960 TCP10L t-complex 10 (mouse)-like 21 -32869022 AI336920 21q22.11 Hs.42034 11    
213261_at 0.368 5.451 2.221 4.197e-02 0.369 -3.960 LBA1 lupus brain antigen 1 3 -36843314 AA035414 3p22.2 Hs.170999 3

binding

 
33494_at 0.582 8.704 2.221 4.197e-02 0.369 -3.960 ETFDH electron-transferring-flavoprotein dehydrogenase 4 159812726 S69232 4q32-q35 Hs.155729 16

electron-transferring-flavoprotein dehydrogenase activity

iron ion binding

mitochondrion

mitochondrial inner membrane

fatty acid beta-oxidation

transport

response to oxidative stress

electron carrier activity

membrane

integral to membrane

oxidoreductase activity

electron transport chain

integral to mitochondrial inner membrane

oxidoreductase activity, oxidizing metal ions with flavin as acceptor

metal ion binding

ubiquinone binding

FAD binding

4 iron, 4 sulfur cluster binding

 
1564352_at 0.253 3.844 2.221 4.197e-02 0.369 -3.960 CECR3 cat eye syndrome chromosome region, candidate 3 22   AF277398   Hs.517394 1    
207394_at 0.381 3.848 2.220 4.199e-02 0.369 -3.961 ZNF137 zinc finger protein 137 19 57791748 NM_003438 19q13.4 Hs.373648 3    
1552499_a_at 0.391 3.373 2.220 4.201e-02 0.369 -3.961 ZSCAN20 zinc finger and SCAN domain containing 20 1 33710818 NM_145238 1p34.3 Hs.442705 6

transcription factor activity

intracellular

nucleus

nucleolus

mitochondrion

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
225680_at 0.277 6.042 2.220 4.201e-02 0.369 -3.961 LRWD1 leucine-rich repeats and WD repeat domain containing 1 7 101892394 BE896303 7q22.1 Hs.274135 2

protein binding

 
210124_x_at 0.332 5.829 2.220 4.202e-02 0.369 -3.962 SEMA4F sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F 2 74734900 AL136552 2p13.1 Hs.25887 14

receptor activity

membrane fraction

endoplasmic reticulum

plasma membrane

integral to plasma membrane

cell-cell signaling

multicellular organismal development

nervous system development

axon guidance

cell differentiation

Axon guidance

215718_s_at -0.277 3.970 -2.220 4.204e-02 0.369 -3.962 PHF3 PHD finger protein 3 6 64414389 AI949220 6q12 Hs.348921 13

molecular_function

protein binding

cellular_component

nucleus

transcription

multicellular organismal development

zinc ion binding

metal ion binding

 
207695_s_at 0.580 4.624 2.220 4.204e-02 0.369 -3.962 IGSF1 immunoglobulin superfamily, member 1 X -130245822, -130235162 NM_001555 Xq25 Hs.22111 15

receptor activity

protein binding

extracellular region

signal transduction

membrane

integral to membrane

regulation of transcription

inhibin beta-A binding

inhibin beta-B binding

 
209594_x_at 0.340 4.895 2.220 4.205e-02 0.369 -3.962 PSG9 pregnancy specific beta-1-glycoprotein 9 19 -48449274 M34421 19q13.2 Hs.502092 17

extracellular region

female pregnancy

 
225355_at 0.440 7.699 2.220 4.205e-02 0.369 -3.962 NEURL1B neuralized homolog 1B (Drosophila) 5 172000880 AK026748 5q35.1 Hs.91521 3

protein binding

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
216389_s_at 0.310 6.333 2.220 4.205e-02 0.369 -3.962 DCAF11 DDB1 and CUL4 associated factor 11 14 23653745, 23653825, 23654331, 23654333 AF283773 14q11.2 Hs.525251 9

protein binding

 
224719_s_at 0.373 9.100 2.220 4.206e-02 0.369 -3.962 C12orf57 chromosome 12 open reading frame 57 12 6923463 BG339653 12p13.31 Hs.405913 Hs.591045 5    
224622_at -0.309 7.355 -2.219 4.207e-02 0.369 -3.962 TBC1D14 TBC1 domain family, member 14 4 6962071, 6962395, 7039789 AB037743 4p16.1 Hs.518611 7

GTPase activator activity

Rab GTPase activator activity

intracellular

regulation of Rab GTPase activity

 
227557_at 0.300 4.267 2.219 4.207e-02 0.369 -3.963 SCARF2 scavenger receptor class F, member 2 22 -19108874 AI127800 22q11.21 Hs.474251 4

receptor activity

scavenger receptor activity

protein binding

cell adhesion

heterophilic cell adhesion

membrane

integral to membrane

 
213295_at -0.610 7.041 -2.219 4.208e-02 0.369 -3.963 CYLD cylindromatosis (turban tumor syndrome) 16 49333461, 49333529 AA555096 16q12.1 Hs.578973 54

structural constituent of ribosome

ubiquitin thiolesterase activity

intracellular

cytoplasm

ribosome

cytoskeleton

translation

ubiquitin-dependent protein catabolic process

cell cycle

peptidase activity

cysteine-type peptidase activity

perinuclear region of cytoplasm

RIG-I-like receptor signaling pathway

203350_at -0.255 6.437 -2.219 4.209e-02 0.369 -3.963 AP1G1 adaptor-related protein complex 1, gamma 1 subunit 16 -70320405 NM_001128 16q23 Hs.461253 36

transporter activity

protein binding

cytoplasm

cytosol

intracellular protein transport

endocytosis

protein transporter activity

membrane

clathrin adaptor complex

clathrin-coated vesicle

cytoplasmic vesicle

Golgi apparatus part

perinuclear region of cytoplasm

Lysosome

212853_at -0.266 6.281 -2.219 4.209e-02 0.369 -3.963 DCUN1D4 DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) 4 52404032 AA779297 4q12 Hs.605388 10

nucleus

 
228967_at -0.711 8.160 -2.219 4.210e-02 0.369 -3.963 EIF1 eukaryotic translation initiation factor 1 17 37098652 BE964053 17q21.2 Hs.150580 10

translation initiation factor activity

cytoplasm

regulation of translational initiation

response to stress

 
219892_at -0.688 7.987 -2.219 4.211e-02 0.369 -3.963 TM6SF1 transmembrane 6 superfamily member 1 15 81567327 NM_023003 15q24-q26 Hs.513094 4

molecular_function

biological_process

membrane

integral to membrane

 
233191_at -0.252 2.669 -2.219 4.211e-02 0.369 -3.963 RUFY2 RUN and FYVE domain containing 2 10 -69806955, -69773280 AB040970 10q21.3 Hs.653144 5

nucleus

zinc ion binding

metal ion binding

 
212558_at -0.379 7.576 -2.219 4.212e-02 0.369 -3.963 SPRY1 sprouty homolog 1, antagonist of FGF signaling (Drosophila) 4 124537405, 124540132 BF508662 4q28.1 Hs.436944 15

ureteric bud development

induction of an organ

protein binding

cytoplasm

cytosol

plasma membrane

multicellular organismal development

regulation of signal transduction

lamellipodium

negative regulation of MAP kinase activity

Jak-STAT signaling pathway

208594_x_at 0.331 4.780 2.219 4.213e-02 0.369 -3.964 LILRA6 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6 19 -59432280 NM_024318 19q13.4 Hs.688335 6

receptor activity

immune response

membrane

integral to membrane

 
203103_s_at -0.249 7.068 -2.218 4.216e-02 0.369 -3.964 PRPF19 PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae) 11 -60414596 NM_014502 11q12.2 Hs.502705 22

ubiquitin ligase complex

protein polyubiquitination

inner cell mass cell proliferation

DNA binding

ubiquitin-protein ligase activity

protein binding

nucleus

nucleoplasm

spliceosomal complex

cytoplasm

lipid particle

DNA repair

mRNA processing

response to DNA damage stimulus

RNA splicing

lipid biosynthetic process

negative regulation of neuron differentiation

positive regulation of astrocyte differentiation

Ubiquitin mediated proteolysis

212760_at -0.388 8.644 -2.218 4.216e-02 0.369 -3.964 UBR2 ubiquitin protein ligase E3 component n-recognin 2 6 42640035 AB002347 6p21.1 Hs.529925 9

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

nucleus

ubiquitin-dependent protein catabolic process

male meiosis I

spermatogenesis

zinc ion binding

ligase activity

protein catabolic process

metal ion binding

 
213128_s_at -0.513 8.400 -2.218 4.216e-02 0.369 -3.964 UBE3A ubiquitin protein ligase E3A 15 -23133488, -23133488, -23133488 AA527499 15q11-q13 Hs.598862 76

ubiquitin-protein ligase activity

protein binding

intracellular

nucleus

cytosol

protein modification process

proteolysis

ubiquitin-dependent protein catabolic process

brain development

protein ubiquitination

ligase activity

acid-amino acid ligase activity

protein complex

interspecies interaction between organisms

Ubiquitin mediated proteolysis

226528_at -0.424 7.599 -2.218 4.217e-02 0.369 -3.965 MTX3 metaxin 3 5 -79308294 AI743044 5q14.1 Hs.531418 3

mitochondrion

mitochondrial outer membrane

protein targeting to mitochondrion

protein transport

membrane

 
220052_s_at -0.251 5.965 -2.218 4.218e-02 0.369 -3.965 TINF2 TERF1 (TRF1)-interacting nuclear factor 2 14 -23778690 NM_012461 14q12 Hs.496191 30

chromosome, telomeric region

nuclear telomere cap complex

DNA binding

nucleus

nucleoplasm

chromosome

protein C-terminus binding

perinucleolar chromocenter

telomere maintenance via telomere lengthening

negative regulation of protein amino acid ADP-ribosylation

telomere assembly

positive regulation of telomere maintenance

negative regulation of telomere maintenance via telomerase

negative regulation of telomere maintenance via telomerase

telomeric DNA binding

negative regulation of epithelial cell proliferation

protein localization to telomere

 
229835_s_at 0.416 5.662 2.218 4.219e-02 0.369 -3.965 SLMO2 slowmo homolog 2 (Drosophila) 20 -57041594 AA004210 20q13.32 Hs.719250 5    
202544_at -0.394 6.593 -2.218 4.220e-02 0.369 -3.965 GMFB glia maturation factor, beta 14 -54010958 NM_004124 14q22.2 Hs.151413 10

actin binding

protein kinase inhibitor activity

signal transducer activity

intracellular

protein amino acid phosphorylation

signal transduction

nervous system development

enzyme activator activity

growth factor activity

 
223399_x_at 0.272 4.773 2.218 4.221e-02 0.369 -3.965 PBRM1 polybromo 1 3 -52554407, -52554407 AF197569 3p21 Hs.189920 19

nuclear chromosome

DNA binding

chromatin binding

protein binding

nucleus

chromatin remodeling

mitosis

regulation of transcription

 
228185_at -0.400 7.338 -2.217 4.224e-02 0.369 -3.966 ZNF25 zinc finger protein 25 10 -38278800 N32599 10p11.1 Hs.499429 8

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
207467_x_at -0.457 8.802 -2.217 4.227e-02 0.369 -3.967 CAST calpastatin 5 96023696, 96064251, 96104999 NM_001750 5q15 Hs.436186 60

protein binding

calcium-dependent cysteine-type endopeptidase inhibitor activity

 
229115_at -0.546 6.652 -2.217 4.227e-02 0.369 -3.967 DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 14 101500617 BF000332 14q32 14q32.3-qter Hs.649497 33

nucleotide binding

microtubule motor activity

protein binding

ATP binding

cytoplasm

Golgi apparatus

cytoplasmic dynein complex

microtubule

microtubule-based movement

mitotic spindle organization

ATPase activity, coupled

 
223625_at -0.380 5.760 -2.217 4.228e-02 0.369 -3.967 FAM126A family with sequence similarity 126, member A 7 -22947402 AB030241 7p15.3 Hs.85603 9

signal transducer activity

cellular_component

cytoplasm

biological_process

membrane

 
203261_at -0.213 8.809 -2.217 4.228e-02 0.369 -3.967 DCTN6 dynactin 6 8 30133354 NM_006571 8p12-p11 Hs.146585 6

cytoplasm

cytoskeleton

dynactin complex

transferase activity

dynein binding

 
221563_at -0.702 7.047 -2.217 4.228e-02 0.369 -3.967 DUSP10 dual specificity phosphatase 10 1 -219941388, -219941388 N36770 1q41 Hs.497822 15

protein tyrosine phosphatase activity

nucleus

cytoplasm

protein amino acid dephosphorylation

response to stress

JNK cascade

hydrolase activity

MAP kinase tyrosine/serine/threonine phosphatase activity

MAPK signaling pathway

212832_s_at -0.214 7.957 -2.217 4.229e-02 0.369 -3.967 CKAP5 cytoskeleton associated protein 5 11 -46721659 AI143124 11p11.2 Hs.201253 16

gamma-tubulin complex

protein binding

centrosome

cell cycle

mitosis

microtubule cytoskeleton

establishment or maintenance of microtubule cytoskeleton polarity

RNA transport

centrosome organization

spindle pole body organization

cell division

 
50400_at 0.214 4.793 2.217 4.229e-02 0.369 -3.967 PAOX polyamine oxidase (exo-N4-amino) 10 135042730 AI743990 10q26.3 Hs.532469 8    
242722_at -0.402 6.194 -2.217 4.230e-02 0.369 -3.967 LMO7 LIM domain 7 13 75092570, 75232797 AA100793 13q22.2 Hs.207631 18

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

nucleus

cytoplasm

zinc ion binding

protein ubiquitination

metal ion binding

Adherens junction

208959_s_at -0.281 7.152 -2.216 4.231e-02 0.369 -3.967 ERP44 endoplasmic reticulum protein 44 9 -101781283 BC005374 9q31.1 Hs.154023 17

protein disulfide isomerase activity

protein binding

endoplasmic reticulum

endoplasmic reticulum lumen

endoplasmic reticulum membrane

ER-Golgi intermediate compartment

protein folding

response to unfolded protein

glycoprotein metabolic process

cell redox homeostasis

 
216468_s_at 0.464 2.068 2.216 4.232e-02 0.369 -3.968 ZNF682 zinc finger protein 682 19 -19976226, -19976226 AC006539 19p12 Hs.306298 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
201386_s_at -0.404 7.290 -2.216 4.232e-02 0.369 -3.968 DHX15 DEAH (Asp-Glu-Ala-His) box polypeptide 15 4 -24138185 AF279891 4p15.3 Hs.696074 9

nucleotide binding

nucleic acid binding

RNA helicase activity

ATP binding

nucleus

U12-type spliceosomal complex

mRNA processing

ATP-dependent helicase activity

RNA splicing

hydrolase activity

 
220665_at 0.268 5.394 2.216 4.233e-02 0.369 -3.968 LUZP4 leucine zipper protein 4 X 114430547 NM_016383 Xq23 Hs.242183 4

nucleus

 
1553279_at 0.369 6.739 2.216 4.237e-02 0.369 -3.969 BTNL9 butyrophilin-like 9 5 180399830 NM_152547 5q35.3 Hs.546502 4

membrane

integral to membrane

 
202897_at -0.363 5.647 -2.216 4.237e-02 0.369 -3.969 SIRPA signal-regulatory protein alpha 20 1822812, 1823424, 1823825 AB023430 20p13 Hs.581021 Hs.679042 53

plasma membrane

plasma membrane

cell adhesion

integral to membrane

SH3 domain binding

 
225413_at 0.208 12.233 2.216 4.238e-02 0.369 -3.969 USMG5 up-regulated during skeletal muscle growth 5 homolog (mouse) 10 -105138803 BG291685 10q24.33 Hs.500921 5

mitochondrion

mitochondrial inner membrane

membrane

integral to membrane

 
221489_s_at 0.248 6.113 2.216 4.238e-02 0.369 -3.969 SPRY4 sprouty homolog 4 (Drosophila) 5 -141670175 W48843 5q31.3 Hs.323308 14

protein binding

cytoplasm

plasma membrane

multicellular organismal development

regulation of signal transduction

cell projection

negative regulation of MAP kinase activity

Jak-STAT signaling pathway

220650_s_at 0.240 5.813 2.215 4.239e-02 0.369 -3.969 SLC9A5 solute carrier family 9 (sodium/hydrogen exchanger), member 5 16 65840355 NM_004594 16q22.1 Hs.439650 11

cation transport

sodium ion transport

regulation of pH

antiporter activity

solute:hydrogen antiporter activity

sodium:hydrogen antiporter activity

membrane

integral to membrane

sodium ion binding

 
204076_at -0.473 7.387 -2.215 4.245e-02 0.370 -3.970 ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 8 -23345516, -23345516 AB002390 8p21.3-p21.2 Hs.444389 8

magnesium ion binding

calcium ion binding

Golgi apparatus

UDP catabolic process

membrane

integral to membrane

hydrolase activity

integral to Golgi membrane

cytoplasmic vesicle

uridine-diphosphatase activity

Purine metabolism

Pyrimidine metabolism

Lysosome

211663_x_at 0.590 7.375 2.215 4.246e-02 0.370 -3.970 PTGDS prostaglandin D2 synthase 21kDa (brain) 9 138991776 M61900 9q34.2-q34.3 Hs.446429 63

prostaglandin biosynthetic process

prostaglandin-D synthase activity

transporter activity

binding

retinoid binding

extracellular region

nucleus

cytoplasm

rough endoplasmic reticulum

Golgi apparatus

fatty acid biosynthetic process

transport

membrane

isomerase activity

nuclear membrane

regulation of circadian sleep/wake cycle, sleep

perinuclear region of cytoplasm

Arachidonic acid metabolism

Metabolic pathways

220048_at 0.226 5.888 2.214 4.247e-02 0.370 -3.971 EDAR ectodysplasin A receptor 2 -108877358 NM_022336 2q11-q13 Hs.171971 23

hair follicle development

transmembrane receptor activity

protein binding

plasma membrane

apoptosis

signal transduction

multicellular organismal development

salivary gland development

integral to membrane

cell differentiation

positive regulation of NF-kappaB import into nucleus

odontogenesis of dentine-containing tooth

pigmentation

apical part of cell

Cytokine-cytokine receptor interaction

210304_at 0.245 5.012 2.214 4.248e-02 0.370 -3.971 PDE6B phosphodiesterase 6B, cGMP-specific, rod, beta 4 609362, 636965 BC000249 4p16.3 Hs.623810 Hs.654544 30

signal transduction

visual perception

phototransduction, visible light

detection of light stimulus

membrane

hydrolase activity

3',5'-cyclic-GMP phosphodiesterase activity

response to stimulus

 
205745_x_at -0.222 5.430 -2.214 4.248e-02 0.370 -3.971 ADAM17 ADAM metallopeptidase domain 17 2 -9546861 NM_003183 2p25 Hs.404914 121

response to hypoxia

positive regulation of protein amino acid phosphorylation

neutrophil mediated immunity

germinal center formation

metalloendopeptidase activity

interleukin-6 receptor binding

integrin binding

protein binding

cytoplasm

integral to plasma membrane

cell-cell junction

focal adhesion

proteolysis

epidermal growth factor receptor signaling pathway

Notch signaling pathway

peptidase activity

zinc ion binding

positive regulation of cell proliferation

response to bacterium

cell surface

positive regulation of T cell chemotaxis

actin cytoskeleton

membrane

apical plasma membrane

SH3 domain binding

PDZ domain binding

B cell differentiation

positive regulation of cell growth

positive regulation of cell migration

positive regulation of transforming growth factor beta receptor signaling pathway

positive regulation of cyclin-dependent protein kinase activity during G1/S

response to lipopolysaccharide

ruffle membrane

negative regulation of interleukin-8 production

positive regulation of chemokine production

regulation of mast cell apoptosis

T cell differentiation in the thymus

cell adhesion mediated by integrin

wound healing, spreading of epidermal cells

response to drug

membrane raft

positive regulation of epidermal growth factor receptor activity

metal ion binding

spleen development

cell motility

PMA-inducible membrane protein ectodomain proteolysis

response to high density lipoprotein stimulus

Notch signaling pathway

Alzheimer's disease

Epithelial cell signaling in Helicobacter pylori infection

220309_at 0.320 3.567 2.214 4.248e-02 0.370 -3.971 TTC22 tetratricopeptide repeat domain 22 1 -55022811, -55019339 NM_017904 1p32.3 Hs.16230 3

binding

 
213355_at -1.052 6.136 -2.214 4.248e-02 0.370 -3.971 ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 3 99934261 AI989567 3q12.1 Hs.148716 5

Golgi apparatus

amino sugar metabolic process

protein amino acid glycosylation

glycolipid metabolic process

sialyltransferase activity

protein lipoylation

membrane

integral to membrane

integral to Golgi membrane

Glycosphingolipid biosynthesis - lacto and neolacto series

Metabolic pathways

222401_s_at -0.343 8.202 -2.214 4.249e-02 0.370 -3.971 TMEM50A transmembrane protein 50A 1 25537397 AL550722 1p36.11 Hs.523054 13

cytoplasm

endoplasmic reticulum

membrane

integral to membrane

 
204646_at 0.374 6.084 2.214 4.250e-02 0.370 -3.971 DPYD dihydropyrimidine dehydrogenase 1 -97957902, -97315887 NM_000110 1p22 Hs.335034 100

dihydroorotate oxidase activity

dihydrouracil dehydrogenase (NAD+) activity

binding

iron ion binding

cytoplasm

cytosol

cytosol

purine base catabolic process

'de novo' pyrimidine base biosynthetic process

thymine catabolic process

uracil catabolic process

thymidine catabolic process

UMP biosynthetic process

electron carrier activity

oxidoreductase activity

dihydropyrimidine dehydrogenase (NADP+) activity

dihydropyrimidine dehydrogenase (NADP+) activity

dihydropyrimidine dehydrogenase (NADP+) activity

dihydropyrimidine dehydrogenase (NADP+) activity

protein homodimerization activity

protein homodimerization activity

metal ion binding

FAD binding

NADP or NADPH binding

4 iron, 4 sulfur cluster binding

oxidation reduction

Pyrimidine metabolism

beta-Alanine metabolism

Pantothenate and CoA biosynthesis

Drug metabolism - other enzymes

Metabolic pathways

229109_s_at 0.212 5.161 2.214 4.251e-02 0.370 -3.972 BLVRA biliverdin reductase A 7 43764796 N21095 7p14-cen Hs.488143 17

biliverdin reductase activity

binding

cytoplasm

zinc ion binding

oxidoreductase activity

heme catabolic process

metal ion binding

oxidation reduction

Porphyrin and chlorophyll metabolism

225464_at -0.656 6.457 -2.214 4.251e-02 0.370 -3.972 FRMD6 FERM domain containing 6 14 51025604, 51188325 N30138 14q22.1 Hs.434914 9

binding

cytoplasm

mitochondrion

cytoskeleton

plasma membrane

 
210381_s_at 0.336 5.282 2.214 4.252e-02 0.370 -3.972 CCKBR cholecystokinin B receptor 11 6237541 BC000740 11p15.4 Hs.203 74

phosphoinositide phospholipase C activity

receptor activity

G-protein coupled receptor activity

protein binding

membrane fraction

plasma membrane

integral to plasma membrane

activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger

elevation of cytosolic calcium ion concentration

digestion

sensory perception

feeding behavior

positive regulation of cell proliferation

gastrin receptor activity

1-phosphatidylinositol-3-kinase regulator activity

Calcium signaling pathway

Neuroactive ligand-receptor interaction

223740_at 0.261 5.740 2.214 4.252e-02 0.370 -3.972 C6orf59 chromosome 6 open reading frame 59 6 -161501163 AL136708 6q26 Hs.664873 5    
234647_at 0.269 6.605 2.213 4.255e-02 0.370 -3.972 KCNIP3 Kv channel interacting protein 3, calsenilin 2 95326798, 95376494 AK026052 2q21.1 Hs.437376 43

negative regulation of transcription from RNA polymerase II promoter

DNA binding

transcription corepressor activity

voltage-gated ion channel activity

potassium channel activity

calcium ion binding

nucleus

cytoplasm

endoplasmic reticulum

Golgi apparatus

cytosol

plasma membrane

ion transport

potassium ion transport

apoptosis

signal transduction

behavior

protein C-terminus binding

specific transcriptional repressor activity

sensory perception of pain

potassium ion binding

regulation of neuron apoptosis

regulation of transcription

response to pain

calcium-dependent protein binding

 
235104_at -0.546 4.216 -2.213 4.257e-02 0.370 -3.973 ERAP2 endoplasmic reticulum aminopeptidase 2 5 96237399 BG292389 5q15 Hs.482910 14

aminopeptidase activity

endoplasmic reticulum

endoplasmic reticulum lumen

proteolysis

immune response

regulation of blood pressure

peptidase activity

metallopeptidase activity

zinc ion binding

membrane

integral to membrane

antigen processing and presentation of endogenous peptide antigen via MHC class I

metal ion binding

 
219081_at -0.666 6.824 -2.213 4.257e-02 0.370 -3.973 ANKHD1 ankyrin repeat and KH domain containing 1 5 139761612, 139761612 NM_024668 5q31.3 Hs.594084 12

RNA binding

protein binding

cytoplasm

 
1558119_at 0.246 4.851 2.213 4.260e-02 0.370 -3.973 TSPAN17 tetraspanin 17 5 176006993 BG769410 5q35.3 Hs.532129 6

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

membrane

integral to membrane

protein ubiquitination

 
225765_at -0.252 6.870 -2.213 4.261e-02 0.370 -3.974 TNPO1 transportin 1 5 72148173, 72179685 AA527296 5q13.2 Hs.482497 58

protein import into nucleus, docking

protein import into nucleus, translocation

protein binding

nucleus

nuclear pore

cytoplasm

nuclear localization sequence binding

protein transporter activity

interspecies interaction between organisms

 
205984_at 0.394 3.481 2.213 4.261e-02 0.370 -3.974 CRHBP corticotropin releasing hormone binding protein 5 76284435 NM_001882 5q11.2-q13.3 Hs.115617 31

protein binding

extracellular space

soluble fraction

signal transduction

female pregnancy

learning or memory

adrenocorticotropin-releasing hormone binding

hormone metabolic process

 
228109_at 0.269 6.056 2.212 4.263e-02 0.370 -3.974 RASGRF2 Ras protein-specific guanine nucleotide-releasing factor 2 5 80292313 AI912976 5q13 Hs.162129 11

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

calcium ion binding

protein binding

intracellular

cytoplasm

endoplasmic reticulum

plasma membrane

regulation of Rho protein signal transduction

regulation of small GTPase mediated signal transduction

MAPK signaling pathway

231953_at -0.533 3.666 -2.212 4.264e-02 0.370 -3.974 BPTF bromodomain PHD finger transcription factor 17 63252241 AK027184 17q24.3 Hs.444200 22

negative regulation of transcription from RNA polymerase II promoter

nucleus

cytoplasm

chromatin remodeling

brain development

DNA-dependent ATPase activity

transcription factor binding

zinc ion binding

transcription regulator activity

positive regulation of gene-specific transcription

sequence-specific DNA binding

sequence-specific DNA binding

regulation of transcription

metal ion binding

 
207675_x_at 0.244 4.688 2.212 4.266e-02 0.370 -3.975 ARTN artemin 1 44171578, 44173617, 44174240 NM_003976 1p33-p32 Hs.632404 14

extracellular region

signal transduction

neuroblast proliferation

growth factor activity

 
229292_at -0.257 4.599 -2.212 4.268e-02 0.370 -3.975 EPB41L5 erythrocyte membrane protein band 4.1 like 5 2 120487138 AI652872 2q14.2 Hs.654802 5

binding

cytoplasm

cytoskeleton

adherens junction

cytoskeletal protein binding

extrinsic to membrane

cell junction

 
202480_s_at -0.394 5.888 -2.212 4.269e-02 0.370 -3.975 DEDD death effector domain containing 1 -159357391, -159357391 NM_004216 1q23.3 Hs.146406 13

DNA binding

protein binding

nucleus

nucleolus

cytoplasm

induction of apoptosis

spermatogenesis

induction of apoptosis via death domain receptors

negative regulation of transcription

regulation of apoptosis

 
202844_s_at -0.287 7.653 -2.212 4.270e-02 0.370 -3.975 RALBP1 ralA binding protein 1 18 9465529 AW025261 18p11.3 Hs.528993 Hs.719181 42

GTPase activator activity

protein binding

intracellular

transport

chemotaxis

signal transduction

small GTPase mediated signal transduction

membrane

ATPase activity

Ral GTPase binding

Rac GTPase activator activity

regulation of GTPase activity

positive regulation of Cdc42 GTPase activity

ATPase activity, coupled to movement of substances

Rac GTPase binding

Pathways in cancer

Pancreatic cancer

209124_at 0.338 6.129 2.211 4.272e-02 0.370 -3.976 MYD88 myeloid differentiation primary response gene (88) 3 38154972 U70451 3p22 Hs.82116 98

response to molecule of fungal origin

MyD88-dependent toll-like receptor signaling pathway

transmembrane receptor activity

Toll binding

death receptor binding

protein binding

cytoplasm

inflammatory response

Toll signaling pathway

response to virus

immunoglobulin mediated immune response

cytokine-mediated signaling pathway

intrinsic to membrane

lipopolysaccharide-mediated signaling pathway

response to lipopolysaccharide

positive regulation of tumor necrosis factor production

regulation of cell proliferation

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of chemokine biosynthetic process

innate immune response

type I interferon biosynthetic process

positive regulation of transcription from RNA polymerase II promoter

positive regulation of JNK cascade

positive regulation of smooth muscle cell proliferation

positive regulation of NF-kappaB transcription factor activity

Apoptosis

Toll-like receptor signaling pathway

219347_at -0.420 6.619 -2.211 4.275e-02 0.370 -3.976 NUDT15 nudix (nucleoside diphosphate linked moiety X)-type motif 15 13 47509703 NM_018283 13q14.2 Hs.144407 5

magnesium ion binding

hydrolase activity

manganese ion binding

 
208385_at 0.275 4.801 2.211 4.275e-02 0.370 -3.977 NR2E3 nuclear receptor subfamily 2, group E, member 3 15 69889947, 69889947 NM_016346 15q22.32 Hs.187354 23

transcription factor activity

steroid hormone receptor activity

steroid binding

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

signal transduction

visual perception

phototransduction

zinc ion binding

sequence-specific DNA binding

metal ion binding

response to stimulus

 
1557615_a_at 0.287 3.847 2.211 4.276e-02 0.370 -3.977 SLIT1 slit homolog 1 (Drosophila) 10 -98747784 AA431797 10q23.3-q24 Hs.632082 16

calcium ion binding

protein binding

extracellular region

extracellular space

multicellular organismal development

nervous system development

brain development

cell differentiation

retinal ganglion cell axon guidance

establishment of nucleus localization

intracellular membrane-bounded organelle

Axon guidance

1552485_at -0.480 5.443 -2.211 4.276e-02 0.370 -3.977 LACTB lactamase, beta 15 61201084, 61201084 NM_171846 15q22.1 Hs.410388 10

mitochondrion

hydrolase activity

 
207602_at 0.262 5.068 2.211 4.276e-02 0.370 -3.977 TMPRSS11D transmembrane protease, serine 11D 4 -68369188 NM_004262 4q13.2 Hs.132195 11

serine-type endopeptidase activity

extracellular region

plasma membrane

integral to plasma membrane

proteolysis

respiratory gaseous exchange

peptidase activity

 
220233_at 0.300 5.404 2.211 4.277e-02 0.370 -3.977 FBXO17 F-box protein 17 19 -44123881, -44123881 NM_024907 19q13.2 Hs.531770 7

protein binding

modification-dependent protein catabolic process

protein catabolic process

 
215138_s_at 0.258 6.141 2.211 4.278e-02 0.370 -3.977 RP1-21O18.1 kazrin 1 14797799, 14797799, 15123211, 15128882, 15145001 AB015329 1p36.21 Hs.368823 10

nucleus

cytoplasm

cytoskeleton

cell junction

desmosome

keratinization

 
225566_at 0.367 4.850 2.211 4.278e-02 0.370 -3.977 NRP2 neuropilin 2 2 206255468, 206255468, 206255468 AI819729 2q33.3 Hs.471200 44

receptor activity

vascular endothelial growth factor receptor activity

membrane fraction

plasma membrane

cell adhesion

multicellular organismal development

nervous system development

axon guidance

integral to membrane

cell differentiation

 
216480_x_at 0.203 2.796 2.211 4.279e-02 0.370 -3.977 MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 10 21863107, 21863579 AF060927 10p12 Hs.30385 19

transcription factor activity

protein binding

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
214242_at 0.234 4.748 2.210 4.280e-02 0.370 -3.977 MAN1A2 mannosidase, alpha, class 1A, member 2 1 117711607 AI189305 1p13 Hs.435938 25

mannosyl-oligosaccharide 1,2-alpha-mannosidase activity

calcium ion binding

membrane fraction

Golgi apparatus

N-glycan processing

metabolic process

membrane

integral to membrane

hydrolase activity, acting on glycosyl bonds

N-Glycan biosynthesis

Metabolic pathways

200846_s_at -0.328 8.856 -2.210 4.281e-02 0.370 -3.978 PPP1CA protein phosphatase 1, catalytic subunit, alpha isoform 11 -66922227 NM_002708 11q13 Hs.183994 83

protein serine/threonine phosphatase activity

iron ion binding

protein binding

nucleoplasm

cytoplasm

carbohydrate metabolic process

glycogen metabolic process

protein amino acid dephosphorylation

cell cycle

hydrolase activity

manganese ion binding

lung development

neuron projection

ribonucleoprotein binding

cell soma

metal ion binding

branching morphogenesis of a tube

cell division

MLL5-L complex

Vascular smooth muscle contraction

Focal adhesion

Long-term potentiation

Regulation of actin cytoskeleton

Insulin signaling pathway

210423_s_at 0.274 4.968 2.210 4.282e-02 0.370 -3.978 SLC11A1 solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 2 218954995 L32185 2q35 Hs.591607 106

transporter activity

iron ion binding

vacuole

plasma membrane

integral to plasma membrane

ion transport

iron ion transport

cellular cadmium ion homeostasis

cellular iron ion homeostasis

response to bacterium

phagocytic vesicle membrane

protein homodimerization activity

transition metal ion transmembrane transporter activity

metal ion:hydrogen antiporter activity

cadmium ion transmembrane transport

Lysosome

207305_s_at -0.379 8.718 -2.210 4.282e-02 0.370 -3.978 KIAA1012 KIAA1012 18 -27663133 NM_014939 18q12.1 Hs.202001 8

Golgi apparatus

cis-Golgi network

ER to Golgi vesicle-mediated transport

vesicle-mediated transport

 
219689_at 0.642 6.378 2.210 4.285e-02 0.370 -3.978 SEMA3G sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G 3 -52442307 NM_020163 3p21.1 Hs.59729 6

receptor activity

extracellular region

multicellular organismal development

membrane

Axon guidance

208394_x_at 0.306 3.497 2.210 4.286e-02 0.370 -3.979 ESM1 endothelial cell-specific molecule 1 5 -54309452 NM_007036 5q11.2 Hs.129944 15

regulation of cell growth

protein binding

insulin-like growth factor binding

extracellular region

growth factor activity

biological_process

 
233836_at 0.298 6.106 2.210 4.287e-02 0.370 -3.979 TNRC6A trinucleotide repeat containing 6A 16 24648549 AK025277 16p11.2 Hs.655057 28

nucleotide binding

cytoplasmic mRNA processing body

RNA binding

cytoplasm

regulation of translation

gene silencing by RNA

micro-ribonucleoprotein complex

gene silencing by miRNA, negative regulation of translation

 
220380_at 0.200 4.012 2.210 4.287e-02 0.370 -3.979 DNASE2B deoxyribonuclease II beta 1 84636802, 84646621 NM_021233 1p22.3 Hs.129142 5

endodeoxyribonuclease activity

deoxyribonuclease II activity

extracellular region

cytoplasm

lysosome

DNA metabolic process

hydrolase activity

Lysosome

229208_at -0.445 3.840 -2.209 4.291e-02 0.370 -3.980 HAUS2 HAUS augmin-like complex, subunit 2 15 40628302 AK022939 15q15.2 Hs.14347 9

centrosome

spindle

microtubule

cell cycle

mitosis

cell division

HAUS complex

 
218639_s_at 0.292 6.765 2.209 4.293e-02 0.370 -3.980 ZXDC ZXD family zinc finger C 3 -127652648, -127639133 NM_025112 3q21.3 Hs.440049 Hs.711046 8

nucleic acid binding

transcription factor activity

intracellular

nucleus

zinc ion binding

transcription activator activity

LRR domain binding

identical protein binding

positive regulation of transcription

metal ion binding

C2H2 zinc finger domain binding

 
207921_x_at 0.303 5.180 2.209 4.295e-02 0.370 -3.980 PAX8 paired box 8 2 -113690044 NM_013952 2q12-q14 Hs.469728 55

transcription factor activity

thyroid-stimulating hormone receptor activity

protein binding

nucleus

nucleoplasm

multicellular organismal development

anatomical structure morphogenesis

transcription activator activity

cell differentiation

regulation of transcription

positive regulation of transcription, DNA-dependent

Pathways in cancer

Thyroid cancer

239314_at 0.230 3.495 2.209 4.295e-02 0.370 -3.981 NHLRC3 NHL repeat containing 3 13 38510454 AV688972 13q13.3 Hs.507783 1

extracellular region

 
214335_at 0.300 6.402 2.208 4.296e-02 0.370 -3.981 RPL18 ribosomal protein L18 19 -53810399 AI669349 19q13 Hs.515517 16

RNA binding

structural constituent of ribosome

intracellular

cytoplasm

cytosol

ribosome

translational elongation

cytosolic large ribosomal subunit

Ribosome

202512_s_at -0.413 6.611 -2.208 4.297e-02 0.370 -3.981 ATG5 ATG5 autophagy related 5 homolog (S. cerevisiae) 6 -106739044 NM_004849 6q21 Hs.486063 30

autophagic vacuole formation

protein binding

cytoplasm

autophagic vacuole

autophagy

apoptosis

pre-autophagosomal structure membrane

post-translational protein modification

Regulation of autophagy

RIG-I-like receptor signaling pathway

203000_at 0.274 3.968 2.208 4.299e-02 0.370 -3.981 STMN2 stathmin-like 2 8 80685934 BF967657 8q21.13 Hs.521651 23

protein binding

membrane fraction

soluble fraction

cytoplasm

intracellular signaling cascade

membrane

neuron differentiation

axon

growth cone

cell projection

perinuclear region of cytoplasm

 
242336_at -0.314 2.787 -2.208 4.299e-02 0.370 -3.981 GSK3B glycogen synthase kinase 3 beta 3 -121023493 R51305 3q13.3 Hs.445733 Hs.593022 373

nucleotide binding

re-entry into mitotic cell cycle

p53 binding

glycogen synthase kinase 3 activity

ATP binding

nucleus

cytoplasm

cytosol

cytosol

glycogen metabolic process

anti-apoptosis

response to stress

ER overload response

intracellular signaling cascade

beta-catenin binding

organ morphogenesis

transferase activity

peptidyl-serine phosphorylation

growth cone

beta-catenin destruction complex

positive regulation of protein complex assembly

protein kinase A catalytic subunit binding

Axin-APC-beta-catenin-GSK3B complex

cell soma

dendritic shaft

membrane-bounded organelle

fat cell differentiation

positive regulation of protein export from nucleus

tau-protein kinase activity

NF-kappaB binding

Wnt receptor signaling pathway through beta-catenin

ErbB signaling pathway

Chemokine signaling pathway

Cell cycle

Wnt signaling pathway

Hedgehog signaling pathway

Axon guidance

Focal adhesion

T cell receptor signaling pathway

B cell receptor signaling pathway

Neurotrophin signaling pathway

Insulin signaling pathway

Melanogenesis

Alzheimer's disease

Pathways in cancer

Colorectal cancer

Endometrial cancer

Prostate cancer

Basal cell carcinoma

229702_at 0.209 4.942 2.208 4.300e-02 0.370 -3.982 CSNK1G3 casein kinase 1, gamma 3 5 122875691 BF516404 5q23 Hs.129206 6

nucleotide binding

protein serine/threonine kinase activity

ATP binding

cytoplasm

protein modification process

protein amino acid phosphorylation

signal transduction

Wnt receptor signaling pathway

transferase activity

Hedgehog signaling pathway

202178_at -0.219 4.146 -2.208 4.300e-02 0.370 -3.982 PRKCZ protein kinase C, zeta 1 1971768, 1994945, 2026014 NM_002744 1p36.33-p36.2 Hs.496255 206

nucleotide binding

protein kinase C activity

ATP binding

membrane fraction

cytoplasm

endosome

plasma membrane

anti-apoptosis

intracellular signaling cascade

zinc ion binding

transferase activity

peptidyl-serine phosphorylation

diacylglycerol binding

negative regulation of protein complex assembly

insulin receptor substrate binding

negative regulation of insulin receptor signaling pathway

metal ion binding

negative regulation of peptidyl-tyrosine phosphorylation

Chemokine signaling pathway

Endocytosis

Tight junction

Insulin signaling pathway

Type II diabetes mellitus

231967_at -0.319 4.128 -2.208 4.302e-02 0.370 -3.982 PHF20L1 PHD finger protein 20-like 1 8 133856785, 133856785, 133856785 AI913146 8q24.22 Hs.304362 4

nucleic acid binding

protein binding

zinc ion binding

metal ion binding

 
220970_s_at 0.286 3.445 2.208 4.302e-02 0.370 -3.982 KRTAP2-4 keratin associated protein 2-4 17 -36474894, 287342 NM_030977 17q12-q21 Hs.560502 3

keratin filament

 
200700_s_at -0.524 7.998 -2.208 4.303e-02 0.370 -3.982 KDELR2 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 7 -6467236 NM_006854 7p22.1 Hs.654552 Hs.705873 12

receptor activity

KDEL sequence binding

protein binding

endoplasmic reticulum

Golgi apparatus

protein retention in ER lumen

intracellular protein transport

membrane

integral to membrane

vesicle-mediated transport

Vibrio cholerae infection

234929_s_at 0.256 5.536 2.208 4.304e-02 0.370 -3.982 SPATA7 spermatogenesis associated 7 14 87921764 AF144488 14q31.3 Hs.525518 12

visual perception

response to stimulus

 
205858_at 0.249 4.680 2.207 4.305e-02 0.370 -3.982 NGFR nerve growth factor receptor (TNFR superfamily, member 16) 17 44927653 NM_002507 17q21-q22 Hs.415768 Hs.681726 126

neurotrophin receptor activity

death receptor activity

protein binding

nucleus

cytoplasm

plasma membrane

integral to plasma membrane

apoptosis

induction of apoptosis

signal transduction

multicellular organismal development

axon guidance

central nervous system development

response to wounding

regulation of gene expression

detection of temperature stimulus

nerve development

cell differentiation

hair follicle morphogenesis

negative regulation of fibroblast growth factor receptor signaling pathway

positive regulation of odontogenesis of dentine-containing tooth

skin development

positive regulation of fibroblast proliferation

nerve growth factor binding

negative regulation of muscle development

negative regulation of hair follicle development

Cytokine-cytokine receptor interaction

Neurotrophin signaling pathway

242272_at 0.274 5.954 2.207 4.305e-02 0.370 -3.983 ZNF785 zinc finger protein 785 16 -30499494 AI375066 16p11.2 Hs.513509 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1552930_at 0.306 5.337 2.207 4.306e-02 0.370 -3.983 MMEL1 membrane metallo-endopeptidase-like 1 1 -2511940 NM_033467 1p36 Hs.591453 10

metalloendopeptidase activity

extracellular region

proteolysis

peptidase activity

zinc ion binding

membrane

integral to membrane

intracellular membrane-bounded organelle

metal ion binding

 
202050_s_at -0.272 7.009 -2.207 4.306e-02 0.370 -3.983 ZMYM4 zinc finger, MYM-type 4 1 35507154 AI650586 1p32-p34 Hs.269211 7

DNA binding

nucleus

multicellular organismal development

zinc ion binding

metal ion binding

 
213358_at -0.469 5.415 -2.207 4.307e-02 0.370 -3.983 KIAA0802 KIAA0802 18 8707368 AB018345 18p11.22 Hs.650822 10    
226776_at -0.800 6.247 -2.207 4.309e-02 0.371 -3.983 ENY2 enhancer of yellow 2 homolog (Drosophila) 8 110415811 BF433516 8q23.1 Hs.492555 5

SAGA complex

nucleus

transport

chromatin modification

histone deubiquitination

ligand-dependent nuclear receptor transcription coactivator activity

regulation of transcription

positive regulation of transcription, DNA-dependent

mRNA transport

 
206164_at 0.307 4.633 2.207 4.311e-02 0.371 -3.984 CLCA2 chloride channel accessory 2 1 86662356 NM_006536 1p31-p22 Hs.241551 18

chloride channel activity

calcium ion binding

protein binding

extracellular region

plasma membrane

integral to plasma membrane

ion transport

chloride transport

cell adhesion

ligand-gated ion channel activity

cell junction

chloride ion binding

Olfactory transduction

213244_at 0.187 5.461 2.206 4.313e-02 0.371 -3.984 SCAMP4 secretory carrier membrane protein 4 19 1856372 AI207792 19p13.3 Hs.144980 6

protein transport

membrane

integral to membrane

 
225105_at 1.874 8.723 2.206 4.314e-02 0.371 -3.984 C12orf75 chromosome 12 open reading frame 75 12 104248543 BF969397 12q23.3 Hs.368938 3    
202956_at -0.334 6.510 -2.206 4.315e-02 0.371 -3.985 ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) 8 -68272450 NM_006421 8q13 Hs.656902 22

ARF guanyl-nucleotide exchange factor activity

binding

intracellular

exocytosis

ARF GTPase activator activity

myosin binding

regulation of ARF protein signal transduction

 
211855_s_at -0.334 5.488 -2.206 4.316e-02 0.371 -3.985 SLC25A14 solute carrier family 25 (mitochondrial carrier, brain), member 14 X 129301727 AF155810 Xq24 Hs.194686 13

binding

mitochondrion

mitochondrial inner membrane

integral to plasma membrane

transport

mitochondrial transport

aerobic respiration

membrane

 
236112_at 0.282 3.294 2.206 4.316e-02 0.371 -3.985 LOC285548 hypothetical LOC285548 4 -13156797 AI632413 4p15.33 Hs.529284 Hs.698223 1    
227916_x_at -0.320 6.032 -2.206 4.317e-02 0.371 -3.985 EXOSC3 exosome component 3 9 -37770307, -37770307 AA747303 9p11 Hs.602571 Hs.713483 12

3'-5'-exoribonuclease activity

nuclear exosome (RNase complex)

cytoplasmic exosome (RNase complex)

RNA binding

exonuclease activity

protein binding

nucleus

nucleolus

cytoplasm

rRNA processing

hydrolase activity

RNA degradation

1569140_at -0.320 2.946 -2.206 4.319e-02 0.371 -3.985 UBR2 ubiquitin protein ligase E3 component n-recognin 2 6 42640035 BC024217 6p21.1 Hs.529925 9

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

nucleus

ubiquitin-dependent protein catabolic process

male meiosis I

spermatogenesis

zinc ion binding

ligase activity

protein catabolic process

metal ion binding

 
243612_at 0.333 4.969 2.206 4.319e-02 0.371 -3.985 NSD1 nuclear receptor binding SET domain protein 1 5 176492685, 176493438 AL526448 5q35.2-q35.3 Hs.106861 36

negative regulation of transcription from RNA polymerase II promoter

chromatin binding

transcription corepressor activity

protein binding

nucleus

methyltransferase activity

zinc ion binding

chromatin modification

histone methylation

transferase activity

ligand-dependent nuclear receptor binding

estrogen receptor binding

histone methyltransferase activity (H4-K20 specific)

regulation of transcription

positive regulation of transcription, DNA-dependent

metal ion binding

retinoid X receptor binding

thyroid hormone receptor binding

histone methyltransferase activity (H3-K36 specific)

androgen receptor binding

Lysine degradation

227455_at 0.364 7.070 2.205 4.322e-02 0.371 -3.986 C6orf136 chromosome 6 open reading frame 136 6 30722794, 2063373, 1861669 BF224092 6p21.33 Hs.591787 7    
219072_at 0.270 7.336 2.205 4.323e-02 0.371 -3.986 BCL7C B-cell CLL/lymphoma 7C 16 -30806616 NM_004765 16p11 Hs.658547 9

apoptosis

 
235155_at 0.387 3.764 2.205 4.326e-02 0.371 -3.987 BDH2 3-hydroxybutyrate dehydrogenase, type 2 4 -104218230 AW136198 4q24 Hs.124696 7

3-hydroxybutyrate dehydrogenase activity

binding

cytoplasm

mitochondrion

fatty acid beta-oxidation

oxidoreductase activity

NAD or NADH binding

oxidation reduction

Synthesis and degradation of ketone bodies

Butanoate metabolism

Metabolic pathways

210187_at 0.376 4.341 2.205 4.327e-02 0.371 -3.987 FKBP1A FK506 binding protein 1A, 12kDa 20 -1300360, -1297622 BC005147 20p13 Hs.471933 Hs.700839 82

peptidyl-prolyl cis-trans isomerase activity

signal transducer activity

transforming growth factor beta receptor activity

ryanodine-sensitive calcium-release channel activity

FK506 binding

FK506 binding

cytoplasm

cytosol

'de novo' protein folding

SMAD protein complex assembly

terminal cisterna

isomerase activity

protein maturation by protein folding

positive regulation of protein ubiquitination

positive regulation of protein binding

negative regulation of protein phosphatase type 2B activity

regulation of activin receptor signaling pathway

beta-amyloid formation

type I transforming growth factor beta receptor binding

protein refolding

T cell activation

positive regulation of I-kappaB kinase/NF-kappaB cascade

fibril organization

SMAD binding

activin binding

regulation of immune response

ventricular cardiac muscle morphogenesis

regulation of ryanodine-sensitive calcium-release channel activity

regulation of ryanodine-sensitive calcium-release channel activity

heart trabecula formation

 
204215_at 0.425 5.143 2.204 4.331e-02 0.371 -3.988 C7orf23 chromosome 7 open reading frame 23 7 -86663413 NM_024315 7q21.1-q21.2 Hs.719226 4

membrane

integral to membrane

 
228825_at 0.380 5.752 2.204 4.332e-02 0.371 -3.988 PTGR1 prostaglandin reductase 1 9 -113365069, -113365069, -113351823 BE566894 9q31.3 Hs.584864 7

alcohol dehydrogenase (NAD) activity

binding

cytoplasm

leukotriene metabolic process

zinc ion binding

oxidoreductase activity

2-alkenal reductase activity

15-oxoprostaglandin 13-oxidase activity

oxidation reduction

 
225307_at -0.356 7.969 -2.204 4.336e-02 0.371 -3.989 ZNF511 zinc finger protein 511 10 134972412 AL583632 10q26.3 Hs.422113 4

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
210331_at 0.226 4.914 2.204 4.336e-02 0.371 -3.989 HECW1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 7 43118722 AB048365 7p14.1-p13 Hs.164453 8

protein binding

intracellular

cytoplasm

protein modification process

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

 
207938_at 0.280 4.614 2.203 4.338e-02 0.371 -3.989 PI15 peptidase inhibitor 15 8 75899326 NM_015886 8q21.11 Hs.98558 6

extracellular region

biological_process

peptidase inhibitor activity

 
217099_s_at 0.280 5.917 2.203 4.340e-02 0.372 -3.990 GEMIN4 gem (nuclear organelle) associated protein 4 17 -594410 AF258545 17p13 Hs.499620 24

spliceosomal snRNP biogenesis

protein binding

nucleus

nucleoplasm

spliceosomal complex

nucleolus

cytoplasm

cytosol

rRNA processing

mRNA processing

RNA splicing

Cajal body

small nuclear ribonucleoprotein complex

 
225278_at -0.301 9.694 -2.203 4.344e-02 0.372 -3.990 PRKAB2 protein kinase, AMP-activated, beta 2 non-catalytic subunit 1 -145093308 BF593382 1q21.1 Hs.50732 21

protein binding

nucleoplasm

cytosol

cAMP-dependent protein kinase complex

fatty acid biosynthetic process

signal transduction

protein kinase binding

AMP-activated protein kinase complex

regulation of fatty acid oxidation

Insulin signaling pathway

Adipocytokine signaling pathway

Hypertrophic cardiomyopathy (HCM)

235066_at -0.365 4.334 -2.203 4.344e-02 0.372 -3.990 MAP4 microtubule-associated protein 4 3 -47989573, -47867183, -47867183 AI078534 3p21 Hs.517949 40

structural molecule activity

protein binding

microtubule

microtubule associated complex

negative regulation of microtubule depolymerization

 
200051_at -0.221 6.779 -2.203 4.345e-02 0.372 -3.991 SART1 squamous cell carcinoma antigen recognized by T cells 11 65485735 NM_005146 11q13.1 Hs.502883 27

molecular_function

nucleus

spliceosomal complex

cytoplasm

cytosol

mRNA processing

cell cycle arrest

RNA splicing

induction of apoptosis by intracellular signals

positive regulation of cytotoxic T cell differentiation

 
234511_at 0.242 4.597 2.202 4.346e-02 0.372 -3.991 ANKRD60 ankyrin repeat domain 60 20   AL354776 20q13.32   1    
1558641_at 0.335 8.374 2.202 4.346e-02 0.372 -3.991 LOC202051 hypothetical protein LOC202051 5 -138760356 AK098740 5q31.2 Hs.373612 3

cytoplasm

multicellular organismal development

spermatogenesis

cell differentiation

 
1554660_a_at -0.480 3.918 -2.202 4.350e-02 0.372 -3.992 C1orf71 chromosome 1 open reading frame 71 1 244796261, 244796261 BC036200 1q44 Hs.368353 9

membrane

integral to membrane

protein complex

 
216865_at 0.291 3.859 2.202 4.350e-02 0.372 -3.992 COL14A1 collagen, type XIV, alpha 1 8 121206532 M64108 8q23 Hs.409662 20

extracellular matrix structural constituent

collagen binding

extracellular region

collagen

collagen type XIV

cell-cell adhesion

collagen fibril organization

protein binding, bridging

 
217892_s_at -0.547 7.362 -2.202 4.353e-02 0.372 -3.992 LIMA1 LIM domain and actin binding 1 12 -48855829, -48855829 NM_016357 12q13 Hs.525419 23

stress fiber

actin monomer binding

cytoplasm

focal adhesion

zinc ion binding

actin cytoskeleton

cell junction

negative regulation of actin filament depolymerization

ruffle organization

metal ion binding

actin filament binding

actin filament bundle formation

 
224265_s_at 0.327 4.436 2.201 4.354e-02 0.372 -3.992 ZAN zonadhesin 7 100169184 AF332980 7q22 Hs.307004 5

protein binding

plasma membrane

binding of sperm to zona pellucida

integral to membrane

cell-cell adhesion

 
241619_at -0.453 5.260 -2.201 4.355e-02 0.372 -3.993 CALM1 calmodulin 1 (phosphorylase kinase, delta) 14 89933125 BF526558 14q24-q31 Hs.282410 Hs.708270 181  

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Glioma

218238_at -0.471 6.646 -2.201 4.356e-02 0.372 -3.993 GTPBP4 GTP binding protein 4 10 1024348 NM_012341 10p15-p14 Hs.215766 10

regulation of cyclin-dependent protein kinase activity

nucleotide binding

GTPase activity

protein binding

GTP binding

nucleus

nucleolus

cytoplasm

negative regulation of DNA replication

negative regulation of cell proliferation

negative regulation of cell-cell adhesion

negative regulation of cell migration

negative regulation of protein ubiquitination

negative regulation of collagen binding

ribosome biogenesis

perinuclear region of cytoplasm

protein stabilization

 
203146_s_at 0.290 6.491 2.201 4.359e-02 0.372 -3.993 GABBR1 gamma-aminobutyric acid (GABA) B receptor, 1 6 -29677983, -29677983, -1025320, -1025320, -827282, -827282 NM_001470 6p21.31 Hs.167017 66

receptor activity

G-protein coupled receptor activity

GABA-B receptor activity

protein binding

extracellular region

plasma membrane

integral to plasma membrane

signal transduction

negative regulation of adenylate cyclase activity

gamma-aminobutyric acid signaling pathway

cell junction

synapse

postsynaptic membrane

Neuroactive ligand-receptor interaction

226426_at -0.328 6.203 -2.201 4.360e-02 0.372 -3.994 ADNP activity-dependent neuroprotector homeobox 20 -48940289 BG149849 20q13.13 Hs.570355 10

chromatin binding

transcription factor activity

dolichyl-phosphate beta-D-mannosyltransferase activity

protein binding

extracellular space

intracellular

nucleus

nucleolus

regulation of transcription, DNA-dependent

GPI anchor biosynthetic process

zinc ion binding

dolichol metabolic process

negative regulation of neuron apoptosis

sequence-specific DNA binding

metal ion binding

 
224997_x_at -0.782 9.509 -2.201 4.361e-02 0.372 -3.994 H19 H19, imprinted maternally expressed transcript (non-protein coding) 11 -1972981 AL575306 11p15.5 Hs.533566 41    
227291_s_at 0.461 10.617 2.200 4.366e-02 0.373 -3.995 BOLA3 bolA homolog 3 (E. coli) 2 -74216035 AI380704 2p13.1 Hs.61472 4

molecular_function

cellular_component

biological_process

 
235779_at 0.231 3.073 2.200 4.367e-02 0.373 -3.995 LOC284408 hypothetical protein LOC284408 19   AW467077 19q13.13 Hs.570010 1    
207770_x_at 0.343 5.873 2.200 4.369e-02 0.373 -3.995 CSH2 chorionic somatomammotropin hormone 2 17 -59303104, -59303103 NM_022644 17q24.2 Hs.654390 Hs.654515 21    
230435_at 0.391 6.759 2.200 4.370e-02 0.373 -3.996 LOC375190 hypothetical protein LOC375190 2 24199853 BF108666 2p23.3 Hs.710370 4    
244431_at 0.318 4.779 2.199 4.371e-02 0.373 -3.996 KILLIN killin protein 10 -89608897 AA057423 10q23 Hs.559820 2

DNA binding

nucleus

apoptosis

cell cycle

 
223267_at -0.297 7.695 -2.199 4.372e-02 0.373 -3.996 RG9MTD1 RNA (guanine-9-) methyltransferase domain containing 1 3 102763401 AF226052 3q12.3 Hs.643184 Hs.715724 3

protein binding

mitochondrion

tRNA processing

methyltransferase activity

transferase activity

 
208159_x_at 0.488 6.452 2.199 4.372e-02 0.373 -3.996 DDX11 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae) 12 31118045 NM_004399 12p11 Hs.443960 13

mitotic sister chromatid segregation

S phase of mitotic cell cycle

G2/M transition of mitotic cell cycle

nucleotide binding

DNA binding

RNA binding

ATP-dependent DNA helicase activity

ATP binding

nucleus

nucleolus

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

cell cycle

positive regulation of cell proliferation

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

 
238952_x_at 0.224 3.760 2.199 4.372e-02 0.373 -3.996 ZNF829 zinc finger protein 829 19 -42074092 BF439163 19q13.12 Hs.124047 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1552853_at 0.330 3.869 2.199 4.374e-02 0.373 -3.996 VWA5B1 von Willebrand factor A domain containing 5B1 1 20489998 NM_144623 1p36.12 Hs.205178 3

extracellular region

 
48531_at -0.387 7.471 -2.199 4.374e-02 0.373 -3.996 TNIP2 TNFAIP3 interacting protein 2 4 -2713184, -2713184 AA522816 4p16.3 Hs.719161 20

protein binding

cytoplasm

I-kappaB kinase/NF-kappaB cascade

 
228323_at -0.444 3.685 -2.199 4.375e-02 0.373 -3.996 CASC5 cancer susceptibility candidate 5 15 38673738 BF248364 15q14 Hs.181855 16

acrosomal vesicle

acrosome assembly

protein binding

nucleus

 
239660_at -0.608 7.151 -2.199 4.376e-02 0.373 -3.997 C20orf74 chromosome 20 open reading frame 74 20 -20321410 BF110518 20p11.22 Hs.472285 4

GTPase activator activity

intracellular

cytoplasm

regulation of small GTPase mediated signal transduction

 
217550_at -0.379 5.599 -2.199 4.378e-02 0.373 -3.997 ATF6 activating transcription factor 6 1 160002707 AA576497 1q22-q23 Hs.492740 43

transcription factor activity

RNA polymerase II transcription factor activity

transcription coactivator activity

nucleus

nuclear envelope

nucleoplasm

endoplasmic reticulum

endoplasmic reticulum membrane

regulation of transcription from RNA polymerase II promoter

protein folding

response to unfolded protein

positive regulation of gene-specific transcription involved in unfolded protein response

signal transduction

membrane

integral to membrane

sequence-specific DNA binding

protein dimerization activity

Alzheimer's disease

230398_at 0.247 4.824 2.199 4.378e-02 0.373 -3.997 TNS4 tensin 4 17 -35885605 AA158731 17q21.2 Hs.438292 17

actin binding

protein binding

cytoplasm

cytoskeleton

focal adhesion

apoptosis

protein localization

cell junction

 
203278_s_at -0.390 6.444 -2.198 4.379e-02 0.373 -3.997 PHF21A PHD finger protein 21A 11 -45907445 NM_016621 11p11.2 Hs.502458 11

histone deacetylase complex

negative regulation of transcription from RNA polymerase II promoter

DNA binding

protein binding

nucleus

zinc ion binding

chromatin modification

regulation of transcription

metal ion binding

 
214751_at 0.547 4.058 2.198 4.382e-02 0.373 -3.998 ZNF468 zinc finger protein 468 19 -58033596 BE541042 19q13.41 Hs.467223 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
200877_at -0.347 9.752 -2.198 4.384e-02 0.373 -3.998 CCT4 chaperonin containing TCP1, subunit 4 (delta) 2 -61948765 NM_006430 2p15 Hs.421509 18

nucleotide binding

ATP binding

cytoplasm

chaperonin-containing T-complex

protein folding

melanosome

unfolded protein binding

 
200596_s_at -0.270 8.292 -2.198 4.386e-02 0.373 -3.999 EIF3A eukaryotic translation initiation factor 3, subunit A 10 -120784530 BE614908 10q26 Hs.523299 38

formation of translation initiation complex

translation initiation factor activity

translation initiation factor activity

structural molecule activity

protein binding

nucleus

cytoplasm

cytosol

eukaryotic translation initiation factor 3 complex

 
220331_at 0.315 5.817 2.197 4.390e-02 0.373 -3.999 CYP46A1 cytochrome P450, family 46, subfamily A, polypeptide 1 14 99220507 NM_006668 14q32.1 Hs.25121 40

endoplasmic reticulum

microsome

lipid metabolic process

cholesterol catabolic process

nervous system development

steroid metabolic process

steroid hydroxylase activity

electron carrier activity

membrane

integral to membrane

heme binding

cholesterol 24-hydroxylase activity

metal ion binding

oxidation reduction

Primary bile acid biosynthesis

236034_at 0.369 4.602 2.197 4.391e-02 0.373 -4.000 ANGPT2 angiopoietin 2 8 -6344580 AA083514 8p23.1 Hs.583870 137

angiogenesis

receptor binding

extracellular region

extracellular space

signal transduction

multicellular organismal development

cell differentiation

 
213210_at 0.333 5.277 2.197 4.394e-02 0.373 -4.000 TAF6L TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa 11 62295450 AI005317 11q12.3 Hs.714400 13

histone deacetylase complex

DNA binding

RNA polymerase II transcription factor activity

transcription coactivator activity

histone acetyltransferase activity

protein binding

nucleus

chromatin remodeling

transcription initiation

regulation of transcription from RNA polymerase II promoter

transcription initiation factor activity

STAGA complex

histone H3 acetylation

regulation of transcription factor activity

Basal transcription factors

200731_s_at -0.497 9.773 -2.197 4.395e-02 0.373 -4.001 PTP4A1 protein tyrosine phosphatase type IVA, member 1 6 64339878 AW165960 6q12 Hs.227777 Hs.706850 28

protein tyrosine phosphatase activity

cytoplasm

early endosome

endoplasmic reticulum

spindle

plasma membrane

protein amino acid dephosphorylation

cell cycle

multicellular organismal development

hydrolase activity

 
201671_x_at -0.349 8.346 -2.196 4.397e-02 0.373 -4.001 USP14 ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) 18 148482 BC003556 18p11.32 Hs.464416 Hs.707058 15

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

cytoplasm

ubiquitin-dependent protein catabolic process

tRNA guanylyltransferase activity

peptidase activity

 
218087_s_at -0.601 10.392 -2.196 4.402e-02 0.374 -4.002 SORBS1 sorbin and SH3 domain containing 1 10 -97061519, -97061519 NM_015385 10q23.3-q24.1 Hs.719081 35

stress fiber

actin binding

SH3/SH2 adaptor activity

SH3/SH2 adaptor activity

insulin receptor binding

nucleus

cytoplasm

cytosol

cytoskeleton

plasma membrane

insulin receptor complex

zonula adherens

cell-substrate adherens junction

transport

insulin receptor signaling pathway

glucose transport

cell junction

stress fiber formation

membrane raft

positive regulation of glycogen biosynthetic process

positive regulation of glucose import

positive regulation of lipid biosynthetic process

focal adhesion formation

PPAR signaling pathway

Adherens junction

Insulin signaling pathway

219455_at -0.280 5.015 -2.195 4.406e-02 0.374 -4.003 C7orf63 chromosome 7 open reading frame 63 7 89712423 NM_024788 7q21.13 Hs.657403 4

binding

 
208342_x_at 0.368 3.460 2.195 4.406e-02 0.374 -4.003 CSH2 chorionic somatomammotropin hormone 2 17 -59303104, -59303103 NM_022645 17q24.2 Hs.654390 Hs.654515 21    
232395_x_at -0.275 2.682 -2.195 4.411e-02 0.374 -4.004 AGBL3 ATP/GTP binding protein-like 3 7 134321798 AI674787 7q33 Hs.648616 4

metallocarboxypeptidase activity

cytoplasm

proteolysis

peptidase activity

metallopeptidase activity

zinc ion binding

metal ion binding

 
213799_s_at 0.290 4.622 2.195 4.411e-02 0.374 -4.004 PTPRA protein tyrosine phosphatase, receptor type, A 20 2792840, 2802141, 2851852 BF740139 20p13 Hs.269577 58

transmembrane receptor protein tyrosine phosphatase activity

integral to plasma membrane

protein amino acid phosphorylation

protein amino acid dephosphorylation

membrane

hydrolase activity

 
234018_s_at -0.873 4.316 -2.195 4.412e-02 0.374 -4.004 SEL1L2 sel-1 suppressor of lin-12-like 2 (C. elegans) 20 -13778049 AL137678 20p12.1 Hs.590879 1

binding

membrane

integral to membrane

 
212609_s_at -0.214 6.247 -2.194 4.417e-02 0.374 -4.005 AKT3 v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma) 1 -241733106, -241718157 U79271 1q43-q44 Hs.498292 45

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

signal transduction

membrane

transferase activity

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

mTOR signaling pathway

Apoptosis

VEGF signaling pathway

Focal adhesion

Tight junction

Toll-like receptor signaling pathway

Jak-STAT signaling pathway

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Neurotrophin signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Chronic myeloid leukemia

Acute myeloid leukemia

Small cell lung cancer

Non-small cell lung cancer

206288_at -0.493 5.125 -2.194 4.420e-02 0.375 -4.006 PGGT1B protein geranylgeranyltransferase type I, beta subunit 5 -114574425 NM_005023 5q22.3 Hs.254006 8

prenyltransferase activity

CAAX-protein geranylgeranyltransferase activity

CAAX-protein geranylgeranyltransferase complex

zinc ion binding

transferase activity

protein amino acid geranylgeranylation

metal ion binding

 
200066_at -0.351 8.580 -2.193 4.421e-02 0.375 -4.006 IK IK cytokine, down-regulator of HLA II 5 140007567 AF182645 2p15-p14 5q31.3 Hs.421245 13

extracellular space

soluble fraction

nucleus

immune response

cell-cell signaling

 
1553849_at -0.314 3.378 -2.193 4.422e-02 0.375 -4.006 CCDC26 coiled-coil domain containing 26 8   NM_145050 8q24.21 Hs.679457 5    
207887_s_at 0.250 4.727 2.193 4.424e-02 0.375 -4.006 CALCR calcitonin receptor 7 -92891734 AB022177 7q21.3 Hs.489127 61

acrosomal vesicle

calcitonin receptor activity

plasma membrane

integral to plasma membrane

G-protein coupled receptor protein signaling pathway

activation of adenylate cyclase activity by G-protein signaling pathway

activation of adenylate cyclase activity by G-protein signaling pathway

elevation of cytosolic calcium ion concentration

negative regulation of ossification

osteoclast differentiation

calcitonin binding

calcitonin binding

regulation of mRNA stability

microtubule-based flagellum part

positive regulation of adenylate cyclase activity

response to glucocorticoid stimulus

Neuroactive ligand-receptor interaction

205568_at 0.345 4.611 2.193 4.425e-02 0.375 -4.006 AQP9 aquaporin 9 15 56217699 NM_020980 15q22.1-q22.2 Hs.104624 18

transporter activity

amine transmembrane transporter activity

purine transmembrane transporter activity

purine transmembrane transporter activity

pyrimidine transmembrane transporter activity

pyrimidine transmembrane transporter activity

integral to plasma membrane

water transport

water transport

purine transport

purine transport

immune response

response to osmotic stress

excretion

metabolic process

response to organic substance

response to organic substance

polyol transmembrane transporter activity

water channel activity

water channel activity

porin activity

polyol transport

polyol transport

amine transport

amine transport

pyrimidine transport

pyrimidine transport

membrane

water homeostasis

response to mercury ion

response to mercury ion

carboxylic acid transport

carboxylic acid transmembrane transporter activity

 
1556051_a_at -0.443 4.579 -2.193 4.426e-02 0.375 -4.007 BICD1 bicaudal D homolog 1 (Drosophila) 12 32151451 CA777994 12p11.2-p11.1 Hs.505202 17

structural constituent of cytoskeleton

protein binding

Golgi apparatus

cytoskeleton

RNA processing

transport

intracellular mRNA localization

anatomical structure morphogenesis

 
1553873_at -0.828 7.926 -2.193 4.426e-02 0.375 -4.007 KLHL34 kelch-like 34 (Drosophila) X -21583529 NM_153270 Xp22.12 Hs.448572 4

protein binding

 
233543_s_at -0.633 5.276 -2.193 4.428e-02 0.375 -4.007 FAM175A family with sequence similarity 175, member A 4 -84601119 AK021582 4q21.21-q21.23 Hs.334772 15

protein binding

nucleus

double-strand break repair

response to DNA damage stimulus

response to ionizing radiation

chromatin modification

G2/M transition DNA damage checkpoint

polyubiquitin binding

positive regulation of DNA repair

BRCA1-A complex

 
228093_at 0.258 5.602 2.192 4.430e-02 0.375 -4.007 ZNF599 zinc finger protein 599 19 -39940818 AW300140 19q13.11 Hs.590961 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
200669_s_at -0.357 10.055 -2.192 4.431e-02 0.375 -4.008 UBE2D3 ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) 4 -103936216, -103936216, -103936216, -103936216, -103936216, -103936216 NM_003340 4q24 Hs.518773 28

nucleotide binding

ubiquitin-protein ligase activity

protein binding

ATP binding

ubiquitin-dependent protein catabolic process

protein ubiquitination

ligase activity

BMP signaling pathway

regulation of protein metabolic process

Ubiquitin mediated proteolysis

1557388_at 0.286 4.754 2.191 4.438e-02 0.375 -4.009 RTTN rotatin 18 -65822020 BC013774 18q22.2 Hs.654809 3

binding

multicellular organismal development

determination of left/right symmetry

 
225292_at 0.413 5.916 2.191 4.439e-02 0.375 -4.009 COL27A1 collagen, type XXVII, alpha 1 9 115958051 AU145229 9q32 Hs.494892 8

extracellular matrix structural constituent

extracellular region

collagen

cell adhesion

 
202631_s_at -0.361 5.006 -2.191 4.439e-02 0.375 -4.009 APPBP2 amyloid beta precursor protein (cytoplasmic tail) binding protein 2 17 -55875301 NM_006380 17q21-q23 Hs.84084 10

microtubule motor activity

protein binding

nucleus

cytoplasm

cytoskeleton

microtubule

microtubule associated complex

intracellular protein transport

membrane

 
200870_at -0.343 10.211 -2.191 4.439e-02 0.375 -4.009 STRAP serine/threonine kinase receptor associated protein 12 15926554 NM_007178 12p12.3 Hs.719087 23

nucleus

spliceosomal complex

cytoplasm

mRNA processing

RNA splicing

identical protein binding

 
230745_s_at 0.331 5.237 2.191 4.440e-02 0.375 -4.009 TOX3 TOX high mobility group box family member 3 16 -51029418, -51029418 AI347147 16q12.1 Hs.460789 11

DNA binding

nucleus

 
215584_at 0.287 6.311 2.191 4.441e-02 0.375 -4.010 HECW1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 7 43118722 AK022679 7p14.1-p13 Hs.164453 8

protein binding

intracellular

cytoplasm

protein modification process

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

 
226082_s_at -0.367 6.250 -2.191 4.441e-02 0.375 -4.010 SFRS15 splicing factor, arginine/serine-rich 15 21 -31965183 AW513629 21q22.1 Hs.17255 12

nucleotide binding

RNA binding

nucleus

nucleolus

mRNA processing

protein C-terminus binding

 
211612_s_at -0.434 5.886 -2.190 4.447e-02 0.375 -4.011 IL13RA1 interleukin 13 receptor, alpha 1 X 117745586 U62858 Xq24 Hs.496646 25

receptor activity

cytokine receptor activity

protein binding

plasma membrane

interleukin-13 receptor complex

cell surface receptor linked signal transduction

integral to membrane

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

237722_at 0.281 3.499 2.190 4.450e-02 0.375 -4.011 FLI1 Friend leukemia virus integration 1 11 128069022 AW444915 11q24.1-q24.3 Hs.504281 53

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

hemostasis

organ morphogenesis

sequence-specific DNA binding

 
229696_at -0.291 6.154 -2.190 4.451e-02 0.375 -4.011 FECH ferrochelatase (protoporphyria) 18 -53363070 AI807483 18q21.3 Hs.365365 61

ferrochelatase activity

ferrochelatase activity

protein binding

mitochondrion

mitochondrial inner membrane

mitochondrial matrix

generation of precursor metabolites and energy

heme biosynthetic process

ferrous iron binding

response to light stimulus

detection of UV

membrane

protoporphyrinogen IX metabolic process

metal ion binding

2 iron, 2 sulfur cluster binding

Porphyrin and chlorophyll metabolism

Metabolic pathways

1555007_s_at 0.288 4.426 2.190 4.452e-02 0.375 -4.012 WDR66 WD repeat domain 66 12 120840862 BC036233 12q24.31 Hs.709837 4    
208897_s_at -0.367 7.006 -2.190 4.452e-02 0.375 -4.012 DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 2 118288724 BC003360 2q14.1 Hs.363492 6

nucleotide binding

RNA binding

ATP-dependent RNA helicase activity

helicase activity

ATP binding

hydrolase activity

 
203824_at -1.729 8.236 -2.190 4.453e-02 0.375 -4.012 TSPAN8 tetraspanin 8 12 -69805143 NM_004616 12q14.1-q21.1 Hs.170563 23

signal transducer activity

lysosome

protein amino acid glycosylation

membrane

integral to membrane

 
236703_at -0.662 6.651 -2.190 4.455e-02 0.376 -4.012 NT5C2 5'-nucleotidase, cytosolic II 10 -104835929 BF114733 10q24.32-q24.33 Hs.97439 12

nucleotide binding

magnesium ion binding

protein binding

cytoplasm

cytosol

5'-nucleotidase activity

5'-nucleotidase activity

nucleotide metabolic process

hydrolase activity

Purine metabolism

Pyrimidine metabolism

Nicotinate and nicotinamide metabolism

Biosynthesis of alkaloids derived from histidine and purine

Metabolic pathways

213323_s_at 0.236 7.015 2.189 4.458e-02 0.376 -4.013 ZC3H7B zinc finger CCCH-type containing 7B 22 40027512 BE855831 22q13.2 Hs.592188 12

nucleic acid binding

protein binding

intracellular

nucleus

zinc ion binding

interspecies interaction between organisms

metal ion binding

 
232532_at 0.337 4.885 2.189 4.459e-02 0.376 -4.013 QRICH2 glutamine rich 2 17 -71781724 AL136774 17q25.1 Hs.252739 2

protein binding

 
222705_s_at 0.340 3.865 2.189 4.460e-02 0.376 -4.013 SLC25A15 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 13 40261546 BC002702 13q14 Hs.646645 Hs.655240 17

urea cycle

L-ornithine transmembrane transporter activity

mitochondrial ornithine transport

transporter activity

binding

mitochondrion

mitochondrial inner membrane

cellular amino acid metabolic process

transport

membrane

integral to membrane

 
210300_at 0.228 6.099 2.188 4.464e-02 0.376 -4.014 REM1 RAS (RAD and GEM)-like GTP-binding 1 20 29526765 AF152863 20q11.21 Hs.247729 8

nucleotide binding

calmodulin binding

GTP binding

small GTPase mediated signal transduction

 
232515_at 0.226 6.190 2.188 4.464e-02 0.376 -4.014 ASB3 ankyrin repeat and SOCS box-containing 3 2 -53750621 AU144567 2p16-p14 Hs.40763 10

intracellular signaling cascade

modification-dependent protein catabolic process

 
213220_at -0.295 6.909 -2.188 4.466e-02 0.376 -4.015 NCRNA00081 non-protein coding RNA 81 10 -112648478, -112648478 AV706096 10q25.2 Hs.232543 Hs.651480 4

cytoplasm

cilium

 
239135_at -0.600 4.822 -2.188 4.467e-02 0.376 -4.015 CPPED1 calcineurin-like phosphoesterase domain containing 1 16 -12661156 AI675054 16p13.12 Hs.460002 4

hydrolase activity

metal ion binding

 
223532_at 0.315 5.944 2.188 4.468e-02 0.376 -4.015 ANKRD39 ankyrin repeat domain 39 2 -96877450 AF151034 2q11.2 Hs.709507 6    
232188_at 0.254 2.860 2.188 4.468e-02 0.376 -4.015 AKAP13 A kinase (PRKA) anchor protein 13 15 83724874, 84021271 AL133427 15q24-q25 Hs.459211 Hs.710656 38

cAMP-dependent protein kinase activity

signal transducer activity

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

protein binding

cellular_component

intracellular

membrane fraction

nucleus

cytoplasm

intracellular signaling cascade

biological_process

zinc ion binding

membrane

diacylglycerol binding

regulation of Rho protein signal transduction

metal ion binding

 
213227_at -0.353 7.810 -2.188 4.470e-02 0.376 -4.015 PGRMC2 progesterone receptor membrane component 2 4 -129410746 BE879873 4q26 Hs.507910 9

steroid hormone receptor activity

receptor activity

steroid binding

protein binding

membrane

integral to membrane

heme binding

 
219862_s_at -0.431 7.863 -2.188 4.471e-02 0.376 -4.016 NARF nuclear prelamin A recognition factor 17 78009348, 78009828 NM_012336 17q25.3 Hs.256526 Hs.600304 10

lamin binding

nucleus

lamin filament

nuclear lumen

 
219596_at 0.429 6.128 2.188 4.472e-02 0.376 -4.016 THAP10 THAP domain containing 10 15 -68960734 NM_020147 15q23 Hs.591123 5

DNA binding

zinc ion binding

metal ion binding

 
224580_at 0.303 4.144 2.187 4.472e-02 0.376 -4.016 SLC38A1 solute carrier family 38, member 1 12 -44863107 BF515894 12q13.11 Hs.694701 11

sodium:amino acid symporter activity

membrane fraction

plasma membrane

ion transport

sodium ion transport

glutamine transport

L-glutamine transmembrane transporter activity

symporter activity

integral to membrane

axon

sodium ion binding

 
225534_at 0.360 9.724 2.187 4.473e-02 0.376 -4.016 C8orf40 chromosome 8 open reading frame 40 8 42515454, 42515874, 42515921, 42516095 AV711345 8p11.21 Hs.655320 4

membrane

integral to membrane

 
214440_at 0.295 4.199 2.187 4.474e-02 0.376 -4.016 NAT1 N-acetyltransferase 1 (arylamine N-acetyltransferase) 8 18072250, 18111897, 18123456 NM_000662 8p23.1-p21.3 Hs.591847 163

arylamine N-acetyltransferase activity

cytoplasm

cytosol

metabolic process

acetyltransferase activity

transferase activity

Caffeine metabolism

Drug metabolism - other enzymes

Metabolic pathways

218268_at -0.333 6.976 -2.187 4.478e-02 0.376 -4.017 TBC1D15 TBC1 domain family, member 15 12 70519753 NM_022771 12q21.1 Hs.284630 Hs.595154 12

GTPase activator activity

Rab GTPase activator activity

intracellular

regulation of Rab GTPase activity

 
230151_at -0.341 6.767 -2.186 4.481e-02 0.376 -4.017 C13orf1 chromosome 13 open reading frame 1 13 -49384842 AW009330 13q14 Hs.44235 11    
210956_at 0.251 4.022 2.186 4.481e-02 0.376 -4.017 PPYR1 pancreatic polypeptide receptor 1 10 46503539 U42387 10q11.2 Hs.524719 14

peptide YY receptor activity

pancreatic polypeptide receptor activity

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

digestion

feeding behavior

blood circulation

Neuroactive ligand-receptor interaction

1557124_at 0.226 5.287 2.186 4.481e-02 0.376 -4.017 LOC440104 hypothetical LOC440104 12   AK091705 12q13.2 Hs.616500 3    
210335_at -0.318 2.782 -2.186 4.481e-02 0.376 -4.017 RASSF9 Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 12 -84722461 AF056209 12q21.31 Hs.527881 4

transporter activity

protein binding

endosome

cytosol

protein targeting

signal transduction

trans-Golgi network transport vesicle membrane

endosome transport

 
219541_at 0.235 5.901 2.186 4.482e-02 0.376 -4.018 LIME1 Lck interacting transmembrane adaptor 1 20 61838421 NM_017806 20q13.3 Hs.233220 10

plasma membrane

immune response

integral to membrane

 
243679_at 0.311 5.120 2.186 4.482e-02 0.376 -4.018 JPH3 junctophilin 3 16 86193999 AI680727 16q24.3 Hs.592068 18

molecular_function

protein binding

endoplasmic reticulum

plasma membrane

junctional sarcoplasmic reticulum membrane

integral to membrane

regulation of ryanodine-sensitive calcium-release channel activity

calcium ion transport into cytosol

 
204209_at -0.458 6.227 -2.186 4.483e-02 0.376 -4.018 PCYT1A phosphate cytidylyltransferase 1, choline, alpha 3 -197449649 AI638771 3q29 Hs.435767 15

choline-phosphate cytidylyltransferase activity

soluble fraction

cytoplasm

endoplasmic reticulum membrane

cytosol

phosphatidylcholine biosynthetic process

phospholipid biosynthetic process

biosynthetic process

response to abiotic stimulus

membrane

transferase activity

nucleotidyltransferase activity

glycogen granule

Aminophosphonate metabolism

Glycerophospholipid metabolism

Metabolic pathways

201503_at -0.450 9.351 -2.186 4.484e-02 0.376 -4.018 G3BP1 GTPase activating protein (SH3 domain) binding protein 1 5 151131668 BG500067 5q33.1 Hs.587054 27

nucleotide binding

DNA binding

RNA binding

ATP-dependent DNA helicase activity

ATP-dependent RNA helicase activity

helicase activity

endonuclease activity

protein binding

ATP binding

intracellular

nucleus

cytoplasm

cytosol

plasma membrane

transport

Ras protein signal transduction

hydrolase activity

 
206828_at 0.222 2.635 2.186 4.489e-02 0.377 -4.019 TXK TXK tyrosine kinase 4 -47763166 NM_003328 4p12 Hs.479669 16

nucleotide binding

non-membrane spanning protein tyrosine kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

transferase activity

Leukocyte transendothelial migration

213004_at -0.440 6.725 -2.185 4.490e-02 0.377 -4.019 ANGPTL2 angiopoietin-like 2 9 -128889448 AI074333 9q34 Hs.653262 11

receptor binding

extracellular region

extracellular space

signal transduction

multicellular organismal development

 
233353_at 0.267 4.397 2.185 4.490e-02 0.377 -4.019 FER1L5 fer-1-like 5 (C. elegans) 2 96672300, 96724920 AL133022 2q11.2 Hs.534025 2

membrane

integral to membrane

 
203335_at 0.335 11.593 2.185 4.491e-02 0.377 -4.019 PHYH phytanoyl-CoA 2-hydroxylase 10 -13359801, -13359801 NM_006214 10p13 Hs.498732 28

iron ion binding

protein binding

peroxisome

lipid metabolic process

nervous system development

visual perception

electron carrier activity

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

L-ascorbic acid binding

metal ion binding

phytanoyl-CoA dioxygenase activity

response to stimulus

oxidation reduction

 
1559635_at 0.249 4.594 2.185 4.494e-02 0.377 -4.020 CASC4 cancer susceptibility candidate 4 15 42368220 AK098265 15q15.3 Hs.512867 6

membrane

integral to membrane

 
223574_x_at 0.325 4.099 2.185 4.495e-02 0.377 -4.020 PPP2R2C protein phosphatase 2 (formerly 2A), regulatory subunit B, gamma isoform 4 -6373205, -6373205 AF086924 4p16.1 Hs.479069 24

protein phosphatase type 2A complex

signal transduction

protein phosphatase type 2A regulator activity

Tight junction

202726_at 0.273 5.395 2.185 4.496e-02 0.377 -4.020 LIG1 ligase I, DNA, ATP-dependent 19 -53310514 NM_000234 19q13.2-q13.3 Hs.1770 54

nucleotide binding

magnesium ion binding

DNA binding

DNA ligase (ATP) activity

ATP binding

nucleus

nucleoplasm

DNA replication

DNA repair

nucleotide-excision repair, DNA gap filling

DNA recombination

response to DNA damage stimulus

cell cycle

anatomical structure morphogenesis

ligase activity

V(D)J recombination

cell division

DNA replication

Base excision repair

Nucleotide excision repair

Mismatch repair

235520_at -0.381 3.502 -2.185 4.497e-02 0.377 -4.020 ZNF280C zinc finger protein 280C X -129164362 AA805654 Xq26.1 Hs.308418 4

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
210019_at 0.265 4.785 2.184 4.498e-02 0.377 -4.021 CALML3 calmodulin-like 3 10 5556923 M36707 10pter-p13 Hs.239600 16

calcium ion binding

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Glioma

236551_at 0.278 2.875 2.184 4.498e-02 0.377 -4.021 ZNF311 zinc finger protein 311 6 -29070572, -417899, -219937 BF508689 6p22.1 Hs.148218 4

DNA binding

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
211866_x_at 0.268 5.244 2.184 4.500e-02 0.377 -4.021 HFE hemochromatosis 6 26195487 AF079409 6p21.3 Hs.233325 592

antigen processing and presentation of peptide antigen via MHC class I

iron ion binding

protein binding

cytoplasm

early endosome

plasma membrane

integral to plasma membrane

protein complex assembly

ion transport

iron ion transport

cellular iron ion homeostasis

receptor-mediated endocytosis

immune response

antigen processing and presentation

cytoplasmic vesicle

MHC class I protein complex

apical part of cell

basal part of cell

perinuclear region of cytoplasm

recycling endosome

 
208066_s_at -0.408 6.996 -2.184 4.504e-02 0.377 -4.022 GTF2B general transcription factor IIB 1 -89090908 NM_001514 1p22-p21 Hs.481852 98

translation initiation factor activity

protein binding

nucleus

nucleoplasm

transcription factor complex

regulation of transcription, DNA-dependent

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

translational initiation

zinc ion binding

general RNA polymerase II transcription factor activity

transcription regulator activity

interspecies interaction between organisms

metal ion binding

Basal transcription factors

226336_at -0.418 6.204 -2.184 4.504e-02 0.377 -4.022 PPIA peptidylprolyl isomerase A (cyclophilin A) 7 44802765 T62044 7p13 Hs.356331 Hs.598115 164

peptidyl-prolyl cis-trans isomerase activity

extracellular region

nucleus

cytoplasm

cytosol

cytosol

protein folding

isomerase activity

provirus integration

initiation of viral infection

peptide binding

interspecies interaction between organisms

regulation of viral genome replication

regulation of viral genome replication

virion binding

unfolded protein binding

 
202092_s_at -0.486 7.279 -2.183 4.508e-02 0.378 -4.023 ARL2BP ADP-ribosylation factor-like 2 binding protein 16 55836538 BF244411 16q13 Hs.632873 Hs.645184 6

small GTPase regulator activity

cytoplasm

mitochondrion

mitochondrial intermembrane space

centrosome

signal transduction

 
228588_s_at -0.485 9.960 -2.183 4.509e-02 0.378 -4.023 UBE2B ubiquitin-conjugating enzyme E2B (RAD6 homolog) 5 133734768 AI499236 5q23-q31 Hs.615284 Hs.644421 23

nucleotide binding

protein polyubiquitination

chromatin

ubiquitin-protein ligase activity

ubiquitin-protein ligase activity

protein binding

ATP binding

nucleus

replication fork

cytoplasm

plasma membrane

postreplication repair

postreplication repair

ubiquitin-dependent protein catabolic process

ubiquitin-dependent protein catabolic process

protein monoubiquitination

response to DNA damage stimulus

spermatogenesis

sperm axoneme assembly

response to UV

ligase activity

ubiquitin protein ligase binding

histone H2A ubiquitination

response to drug

protein stabilization

regulation of protein metabolic process

protein autoubiquitination

Wnt receptor signaling pathway through beta-catenin

Ubiquitin mediated proteolysis

209252_at -0.295 7.765 -2.183 4.513e-02 0.378 -4.024 HARS2 histidyl-tRNA synthetase 2, mitochondrial (putative) 5 140051201 U18937 5q31.3 Hs.432560 8

nucleotide binding

histidine-tRNA ligase activity

ATP binding

cytoplasm

mitochondrion

mitochondrial matrix

histidyl-tRNA aminoacylation

ligase activity

Aminoacyl-tRNA biosynthesis

208414_s_at 0.275 6.132 2.183 4.514e-02 0.378 -4.024 HOXB3 homeobox B3 17 -43981230 NM_002146 17q21.3 Hs.654560 21

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anterior/posterior pattern formation

glossopharyngeal nerve morphogenesis

thyroid gland development

sequence-specific DNA binding

embryonic skeletal system morphogenesis

cartilage development

definitive hemopoiesis

 
213660_s_at 0.223 4.978 2.182 4.515e-02 0.378 -4.024 TOP3B topoisomerase (DNA) III beta 22 -20641402 AA581879 22q11.22 Hs.436401 15

nucleotide binding

condensed chromosome

DNA topoisomerase type I activity

protein binding

ATP binding

nucleus

DNA topological change

DNA unwinding during replication

chromosome segregation

Homologous recombination

202747_s_at 0.380 8.325 2.182 4.517e-02 0.378 -4.024 ITM2A integral membrane protein 2A X -78502536 NM_004867 Xq13.3-Xq21.2 Hs.17109 Hs.694944 14

cytoplasm

plasma membrane

integral to membrane

 
215690_x_at -0.284 8.023 -2.182 4.518e-02 0.378 -4.025 GPAA1 glycosylphosphatidylinositol anchor attachment protein 1 homolog (yeast) 8 145209511 AL157437 8q24.3 Hs.627962 16

GPI-anchor transamidase activity

protein binding

endoplasmic reticulum

protein complex assembly

protein retention in ER lumen

tubulin binding

membrane

integral to membrane

attachment of GPI anchor to protein

attachment of GPI anchor to protein

attachment of GPI anchor to protein

GPI anchor binding

GPI-anchor transamidase complex

Glycosylphosphatidylinositol(GPI)-anchor biosynthesis

Metabolic pathways

231182_at 0.230 3.258 2.182 4.518e-02 0.378 -4.025 WIPF1 WAS/WASL interacting protein family, member 1 2 -175132547, -175132547 BF446719 2q31.1 Hs.128067 29

actin binding

profilin binding

nucleus

nucleolus

cytoplasm

protein complex assembly

actin polymerization or depolymerization

actin cytoskeleton

cytoplasmic vesicle

 
210533_at 0.317 2.627 2.182 4.519e-02 0.378 -4.025 MSH4 mutS homolog 4 (E. coli) 1 76035217 AF104243 1p31 Hs.216639 20

nucleotide binding

synaptonemal complex

ovarian follicle development

DNA binding

ATP binding

nucleus

mismatch repair

meiosis

synapsis

reciprocal meiotic recombination

spermatogenesis

female gamete generation

mismatched DNA binding

 
219286_s_at -0.425 7.781 -2.182 4.519e-02 0.378 -4.025 RBM15 RNA binding motif protein 15 1 110683467 NM_022768 1p13 Hs.435947 Hs.708172 13

nucleotide binding

RNA binding

protein binding

nucleus

negative regulation of transcription

interspecies interaction between organisms

 
232467_at 0.408 5.381 2.182 4.519e-02 0.378 -4.025 KIRREL kin of IRRE like (Drosophila) 1 156229686 BE301156 1q21-q25 Hs.609291 Hs.657006 15

plasma membrane

integral to membrane

 
218371_s_at -0.343 6.257 -2.182 4.520e-02 0.378 -4.025 PSPC1 paraspeckle component 1 13 -19175008, -19146895 NM_018282 13q12.11 Hs.213198 9

nucleotide binding

RNA binding

protein binding

nucleus

nucleolus

cytoplasm

nuclear matrix

regulation of transcription

 
218451_at 0.232 4.382 2.182 4.520e-02 0.378 -4.025 CDCP1 CUB domain containing protein 1 3 -45126734, -45098772 NM_022842 3p21.31 Hs.476093 21

extracellular region

plasma membrane

integral to membrane

 
232367_x_at 0.262 6.715 2.182 4.520e-02 0.378 -4.025 ZNF598 zinc finger protein 598 16 -1987768 BG341703 16p13.3 Hs.343828 5

protein binding

intracellular

zinc ion binding

metal ion binding

 
209658_at -0.261 8.444 -2.182 4.522e-02 0.378 -4.025 CDC16 cell division cycle 16 homolog (S. cerevisiae) 13 114018463 AF164598 13q34 Hs.374127 32

binding

nucleoplasm

cytoplasm

centrosome

cytosol

spindle microtubule

cell cycle

regulation of mitosis

cell proliferation

modification-dependent protein catabolic process

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

cell division

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

224666_at 0.267 7.798 2.182 4.523e-02 0.378 -4.025 NSMCE1 non-SMC element 1 homolog (S. cerevisiae) 16 -27143815 AF161451 16p12.1 Hs.284295 6

nucleus

DNA repair

DNA recombination

response to DNA damage stimulus

zinc ion binding

metal ion binding

 
235576_at 0.266 4.653 2.182 4.523e-02 0.378 -4.025 WDR27 WD repeat domain 27 6 -169599231 AW474542 6q27 Hs.709476 2    
227962_at -0.333 7.234 -2.181 4.524e-02 0.378 -4.026 ACOX1 acyl-Coenzyme A oxidase 1, palmitoyl 17 -71449186 BF435852 17q24-q25 17q25.1 Hs.464137 26

acyl-CoA dehydrogenase activity

acyl-CoA oxidase activity

acyl-CoA oxidase activity

cytoplasm

mitochondrion

peroxisome

peroxisomal membrane

generation of precursor metabolites and energy

lipid metabolic process

fatty acid beta-oxidation

prostaglandin metabolic process

spermatogenesis

electron carrier activity

protein N-terminus binding

FAD binding

oxidation reduction

Fatty acid metabolism

alpha-Linolenic acid metabolism

Biosynthesis of unsaturated fatty acids

Biosynthesis of plant hormones

Metabolic pathways

PPAR signaling pathway

231705_at 0.196 5.203 2.181 4.524e-02 0.378 -4.026 HRSP12 heat-responsive protein 12 8 -99183742 AV654263 8q22 Hs.18426 12

endonuclease activity

nucleus

cytoplasm

regulation of translational termination

hydrolase activity

 
35254_at -0.216 5.737 -2.181 4.524e-02 0.378 -4.026 TRAFD1 TRAF-type zinc finger domain containing 1 12 111047731 AB007447 12q Hs.5148 10

protein binding

intracellular

zinc ion binding

metal ion binding

 
222495_at -0.367 7.620 -2.181 4.531e-02 0.378 -4.027 TMEM167B transmembrane protein 167B 1 109434925, 126731 AV712912 1p13.3 Hs.82933 4

membrane

integral to membrane

 
1553983_at 0.224 5.773 2.180 4.535e-02 0.378 -4.028 DTYMK deoxythymidylate kinase (thymidylate kinase) 2 -242263829, -92952 AF258562 2q37.3 Hs.471873 12

nucleotide binding

thymidylate kinase activity

ATP binding

cytosol

dTDP biosynthetic process

cell cycle

cell proliferation

nucleotide biosynthetic process

kinase activity

transferase activity

nucleoside kinase activity

Pyrimidine metabolism

Metabolic pathways

1557682_a_at 0.241 5.313 2.180 4.535e-02 0.378 -4.028 RP11-297H3.4 hypothetical LOC284688 1 -168507169 BG150294 1q24.2 Hs.135668 2    
225120_at -0.345 7.366 -2.180 4.537e-02 0.378 -4.028 PURB purine-rich element binding protein B 7 -44882416 N25931 7p13 Hs.349150 Hs.596321 13

translation repressor activity, nucleic acid binding

double-stranded DNA binding

single-stranded DNA binding

transcription factor activity

mRNA binding

nucleus

DNA replication factor A complex

transcription factor binding

specific transcriptional repressor activity

purine-rich negative regulatory element binding

regulation of transcription

regulation of myeloid cell differentiation

negative regulation of transcription, DNA-dependent

SMAD binding

 
209201_x_at 0.364 4.486 2.180 4.537e-02 0.378 -4.028 CXCR4 chemokine (C-X-C motif) receptor 4 2 -136588388, -136588388 L01639 2q21 Hs.593413 604

activation of MAPK activity

response to hypoxia

actin binding

G-protein coupled receptor activity

protein binding

cytoplasm

plasma membrane

integral to plasma membrane

apoptosis

chemotaxis

inflammatory response

immune response

signal transduction

G-protein coupled receptor protein signaling pathway

elevation of cytosolic calcium ion concentration

response to virus

coreceptor activity

C-C chemokine receptor activity

C-X-C chemokine receptor activity

initiation of viral infection

cell leading edge

myosin light chain binding

interspecies interaction between organisms

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

Endocytosis

Axon guidance

Leukocyte transendothelial migration

239762_at -0.193 6.519 -2.180 4.537e-02 0.378 -4.028 LOC286437 hypothetical protein LOC286437 X   AI080505 Xq22.2 Hs.656786 1    
225820_at -0.401 6.981 -2.180 4.538e-02 0.378 -4.028 PHF17 PHD finger protein 17 4 129950228, 129950228 AV646599 4q26-q27 Hs.12420 14

histone acetyltransferase complex

protein binding

nucleus

cytoplasm

apoptosis

response to stress

zinc ion binding

negative regulation of cell growth

histone H3 acetylation

histone H4-K5 acetylation

histone H4-K8 acetylation

histone H4-K12 acetylation

histone H4-K16 acetylation

regulation of transcription

metal ion binding

 
208980_s_at -0.408 12.542 -2.180 4.539e-02 0.378 -4.029 UBC ubiquitin C 12 -123962144 M26880 12q24.3 Hs.520348 226  

PPAR signaling pathway

229518_at 0.232 4.434 2.180 4.540e-02 0.378 -4.029 FAM46B family with sequence similarity 46, member B 1 -27204099 AA531023 1p36.11 Hs.632378 7    
222580_at -0.442 7.613 -2.180 4.540e-02 0.378 -4.029 ZNF644 zinc finger protein 644 1 -91153444, -91153444 AK023596 1p22.2 Hs.173001 7

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
222855_s_at 0.261 4.377 2.180 4.540e-02 0.378 -4.029 TRPV2 transient receptor potential cation channel, subfamily V, member 2 17 16259612 BF058747 17p11.2 Hs.279746 18

calcium channel activity

calcium ion binding

intracellular

cytoplasm

plasma membrane

integral to plasma membrane

ion transport

calcium ion transport

sensory perception

response to temperature stimulus

melanosome

 
212088_at -0.262 7.792 -2.179 4.547e-02 0.379 -4.030 PMPCA peptidase (mitochondrial processing) alpha 9 138424936 BF570122 9q34.3 Hs.495471 10

metalloendopeptidase activity

protein binding

mitochondrion

mitochondrial inner membrane

mitochondrial matrix

proteolysis

peptidase activity

zinc ion binding

metal ion binding

 
211470_s_at 0.261 2.829 2.179 4.548e-02 0.379 -4.030 SULT1C2 sulfotransferase family, cytosolic, 1C, member 2 2 108271526 AF186255 2q11.1-q11.2 Hs.436123 19

cytoplasm

cytoskeleton

sulfotransferase activity

amine metabolic process

transferase activity

 
231112_at -0.246 4.803 -2.178 4.550e-02 0.379 -4.031 SNRPE small nuclear ribonucleoprotein polypeptide E 1 202097362 AU144102 1q32 Hs.334612 Hs.654418 43

spliceosome assembly

spliceosomal snRNP biogenesis

RNA binding

protein binding

nucleus

nucleoplasm

spliceosomal complex

cytosol

RNA splicing

small nuclear ribonucleoprotein complex

 
242297_at 0.295 5.750 2.178 4.550e-02 0.379 -4.031 RREB1 ras responsive element binding protein 1 6 7053186 BF904033 6p25 Hs.298248 13

DNA binding

intracellular

nucleus

cytoplasm

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

Ras protein signal transduction

multicellular organismal development

zinc ion binding

transcription activator activity

nuclear speck

metal ion binding

 
210223_s_at 0.313 5.092 2.178 4.552e-02 0.379 -4.031 MR1 major histocompatibility complex, class I-related 1 179269761 AF010446 1q25.3 Hs.101840 11

antigen processing and presentation of peptide antigen via MHC class I

extracellular region

endoplasmic reticulum

plasma membrane

immune response

integral to membrane

antigen processing and presentation

MHC class I receptor activity

MHC class I protein complex

 
1553101_a_at -0.437 8.478 -2.178 4.555e-02 0.379 -4.032 ALKBH5 alkB, alkylation repair homolog 5 (E. coli) 17 18027591 NM_017758 17p11.2 Hs.462392 5

membrane

integral to membrane

 
1556006_s_at -0.516 4.313 -2.178 4.555e-02 0.379 -4.032 CSNK1A1 casein kinase 1, alpha 1 5 -148855037 BQ025347 5q32 Hs.529862 Hs.712555 53

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

cytosol

protein amino acid phosphorylation

Wnt receptor signaling pathway

transferase activity

Wnt signaling pathway

Hedgehog signaling pathway

213694_at -0.468 6.555 -2.178 4.555e-02 0.379 -4.032 RSBN1 round spermatid basic protein 1 1 -114105976 AW027347 1p13.2 Hs.486285 6

protein binding

nucleus

 
205174_s_at -1.113 4.526 -2.178 4.557e-02 0.379 -4.032 QPCT glutaminyl-peptide cyclotransferase 2 37425256 NM_012413 2p22.2 Hs.79033 15

protein modification process

proteolysis

peptidase activity

zinc ion binding

acyltransferase activity

glutaminyl-peptide cyclotransferase activity

transferase activity

metal ion binding

 
205557_at 0.300 4.642 2.177 4.560e-02 0.379 -4.033 BPI bactericidal/permeability-increasing protein 20 36365965 NM_001725 20q11.23-q12 Hs.529019 36

lipopolysaccharide binding

extracellular region

integral to plasma membrane

lipid binding

membrane

negative regulation of interleukin-6 production

negative regulation of interleukin-8 production

negative regulation of tumor necrosis factor production

defense response to bacterium

negative regulation of macrophage activation

 
217556_at -0.515 4.514 -2.177 4.564e-02 0.380 -4.033 CLCN4 chloride channel 4 X 10084984 W26966 Xp22.3 Hs.495674 17

nucleotide binding

ion channel activity

voltage-gated chloride channel activity

ATP binding

endosome

ion transport

chloride transport

antiporter activity

membrane

integral to membrane

chloride ion binding

 
202823_at -0.421 8.055 -2.177 4.565e-02 0.380 -4.033 TCEB1 transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) 8 -75021187 N89607 8q21.11 Hs.554594 46

protein binding

nucleus

nucleoplasm

cytosol

regulation of transcription from RNA polymerase II promoter

ubiquitin-dependent protein catabolic process

interspecies interaction between organisms

regulation of transcription

Ubiquitin mediated proteolysis

Pathways in cancer

Renal cell carcinoma

233813_at 0.463 4.567 2.177 4.565e-02 0.380 -4.034 PPP1R16B protein phosphatase 1, regulatory (inhibitor) subunit 16B 20 36867761 AK026900 20q11.23 Hs.45719 7

plasma membrane

signal transduction

protein phosphatase binding

 
239313_at -0.299 5.369 -2.176 4.567e-02 0.380 -4.034 LOC401320 hypothetical LOC401320 7   AI803568 7p15.1 Hs.561708 2    
210625_s_at 0.388 7.592 2.176 4.568e-02 0.380 -4.034 AKAP1 A kinase (PRKA) anchor protein 1 17 52517551 U34074 17q21-q23 Hs.463506 27

RNA binding

protein binding

cytoplasm

mitochondrion

mitochondrial outer membrane

membrane

integral to membrane

 
208507_at 0.345 5.544 2.176 4.571e-02 0.380 -4.035 OR7C2 olfactory receptor, family 7, subfamily C, member 2 19 14913300 NM_012377 19p13.1 Hs.589620 5

receptor activity

olfactory receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

sensory perception of smell

integral to membrane

response to stimulus

Olfactory transduction

237470_at -0.217 3.205 -2.176 4.571e-02 0.380 -4.035 DOCK7 dedicator of cytokinesis 7 1 -62692984 R45067 1p31.3 Hs.406156 15

microtubule cytoskeleton organization

guanyl-nucleotide exchange factor activity

GTP binding

multicellular organismal development

nervous system development

axonogenesis

cell differentiation

axon

growth cone

neuron projection development

activation of Rac GTPase activity

positive regulation of peptidyl-serine phosphorylation

basal part of cell

establishment of neuroblast polarity

Rac GTPase binding

GTPase binding

 
222449_at -0.483 7.197 -2.176 4.572e-02 0.380 -4.035 PMEPA1 prostate transmembrane protein, androgen induced 1 20 -55656857, -55656857, -55656857 AL035541 20q13.31 20q13.31-q13.33 Hs.517155 12

molecular_function

plasma membrane

integral to membrane

androgen receptor signaling pathway

WW domain binding

 
230661_at 0.206 3.557 2.176 4.572e-02 0.380 -4.035 C8orf84 chromosome 8 open reading frame 84 8 -74139333 AW451999 8q21.11 Hs.439040 3

scavenger receptor activity

extracellular region

immune response

polysaccharide binding

 
228469_at 0.387 8.290 2.176 4.573e-02 0.380 -4.035 PPID peptidylprolyl isomerase D 4 -159849728 BF431902 4q31.3 Hs.581725 25

peptidyl-prolyl cis-trans isomerase activity

cytoplasm

protein folding

cyclosporin A binding

isomerase activity

heat shock protein binding

Calcium signaling pathway

Parkinson's disease

Huntington's disease

231975_s_at -0.467 5.472 -2.176 4.575e-02 0.380 -4.035 MIER3 mesoderm induction early response 1, family member 3 5 -56251185 AK002183 5q11.2 Hs.657594 7

DNA binding

nucleus

regulation of transcription

 
209843_s_at 0.307 6.229 2.175 4.577e-02 0.380 -4.036 SOX10 SRY (sex determining region Y)-box 10 22 -36698264 BC002824 22q13.1 Hs.376984 46

in utero embryonic development

DNA binding

chromatin binding

RNA polymerase II transcription factor activity, enhancer binding

transcription coactivator activity

nucleus

cytoplasm

peripheral nervous system development

cell differentiation

melanocyte differentiation

identical protein binding

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

cell maturation

enteric nervous system development

gut morphogenesis

developmental growth

oligodendrocyte differentiation

 
1558846_at 0.285 2.802 2.175 4.577e-02 0.380 -4.036 PNLIPRP3 pancreatic lipase-related protein 3 10 118177413 AL833418 10q25.3 Hs.276724 1

triacylglycerol lipase activity

extracellular region

lipid catabolic process

hydrolase activity

 
232915_at 0.276 5.269 2.175 4.578e-02 0.380 -4.036 DDX49 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 19 18891493 AW571715 19p12 Hs.143187 8

nucleotide binding

RNA binding

helicase activity

ATP binding

ATP-dependent helicase activity

hydrolase activity

 
211296_x_at -0.292 13.124 -2.175 4.579e-02 0.380 -4.036 UBC ubiquitin C 12 -123962144 AB009010 12q24.3 Hs.520348 226  

PPAR signaling pathway

244804_at -0.589 6.813 -2.175 4.580e-02 0.380 -4.036 SQSTM1 sequestosome 1 5 179165993, 179166608, 179180447 AW293441 5q35 Hs.437277 100

protein kinase C binding

protein binding

nucleus

cytoplasm

late endosome

cytosol

cytosol

ubiquitin-dependent protein catabolic process

apoptosis

response to stress

immune response

intracellular signaling cascade

protein localization

zinc ion binding

endosome transport

cell differentiation

receptor tyrosine kinase binding

SH2 domain binding

SH2 domain binding

regulation of I-kappaB kinase/NF-kappaB cascade

regulation of I-kappaB kinase/NF-kappaB cascade

ubiquitin binding

ubiquitin binding

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

 
201118_at -0.415 6.317 -2.175 4.580e-02 0.380 -4.036 PGD phosphogluconate dehydrogenase 1 10381671 NM_002631 1p36.3-p36.13 Hs.464071 11

phosphogluconate dehydrogenase (decarboxylating) activity

protein binding

pentose-phosphate shunt, oxidative branch

oxidoreductase activity

pentose biosynthetic process

NADP or NADPH binding

oxidation reduction

Pentose phosphate pathway

Glutathione metabolism

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of plant hormones

Metabolic pathways

226814_at 0.456 6.544 2.175 4.580e-02 0.380 -4.036 ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 3 -64476370 AI431730 3p14.3-p14.2 Hs.656071 23

metalloendopeptidase activity

extracellular region

proteinaceous extracellular matrix

proteolysis

glycoprotein catabolic process

multicellular organismal development

peptidase activity

zinc ion binding

metal ion binding

 
203775_at -0.421 4.479 -2.175 4.582e-02 0.380 -4.037 SLC25A13 solute carrier family 25, member 13 (citrin) 7 -95587468, -95587467 NM_014251 7q21.3 Hs.489190 31

transporter activity

L-glutamate transmembrane transporter activity

binding

calcium ion binding

mitochondrion

mitochondrial inner membrane

integral to plasma membrane

ATP biosynthetic process

transport

L-aspartate transmembrane transporter activity

aspartate transport

L-glutamate transport

membrane

malate-aspartate shuttle

cellular respiration

response to calcium ion

 
213048_s_at -0.321 8.639 -2.175 4.583e-02 0.380 -4.037 SET SET nuclear oncogene 9 130485754, 130491329 W26593 9q34 Hs.436687 Hs.609454 66

phosphoprotein phosphatase inhibitor activity

nucleus

nucleoplasm

cytoplasm

endoplasmic reticulum

cytosol

DNA replication

nucleosome assembly

nucleosome disassembly

nucleocytoplasmic transport

protein phosphatase type 2A regulator activity

negative regulation of histone acetylation

histone binding

perinuclear region of cytoplasm

 
229176_at -0.369 5.700 -2.175 4.583e-02 0.380 -4.037 ANKH ankylosis, progressive homolog (mouse) 5 -14757908 AI672354 5p15.1 Hs.156727 36

skeletal system development

inorganic phosphate transmembrane transporter activity

integral to plasma membrane

transport

phosphate transport

locomotory behavior

outer membrane

outer membrane

regulation of bone mineralization

regulation of bone mineralization

inorganic diphosphate transmembrane transporter activity

 
217118_s_at -0.757 6.156 -2.175 4.584e-02 0.380 -4.037 C22orf9 chromosome 22 open reading frame 9 22 -43966786, -43966786 AK025608 22q13.31 Hs.592207 10

protein binding

 
229565_x_at 0.255 4.057 2.174 4.585e-02 0.380 -4.037 TBX3 T-box 3 12 -113592441 N29712 12q24.1 Hs.714737 28

skeletal system development

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

nucleolus

cytoplasm

regulation of transcription from RNA polymerase II promoter

anti-apoptosis

multicellular organismal development

cell aging

positive regulation of cell proliferation

determination of anterior/posterior axis, embryo

organ morphogenesis

general transcriptional repressor activity

male genitalia development

female genitalia development

mammary gland development

luteinizing hormone secretion

embryonic arm morphogenesis

forelimb morphogenesis

embryonic digit morphogenesis

sequence-specific DNA binding

negative regulation of myoblast differentiation

positive regulation of cell cycle

negative regulation of transcription, DNA-dependent

follicle-stimulating hormone secretion

mesoderm morphogenesis

 
214890_s_at -0.768 5.468 -2.174 4.585e-02 0.380 -4.037 FAM149A family with sequence similarity 149, member A 4 187302988, 187307320 AL080065 4q35.1 Hs.357025 3    
1554093_a_at -0.339 8.125 -2.174 4.586e-02 0.380 -4.037 SNAPC5 small nuclear RNA activating complex, polypeptide 5, 19kDa 15 -64569719 BC014315 15q22.31 Hs.30174 7

transcription factor activity

nucleus

transcription from RNA polymerase II promoter

transcription initiation from RNA polymerase III promoter

regulation of transcription

 
1560974_s_at 0.585 5.035 2.174 4.589e-02 0.380 -4.038 NOS1 nitric oxide synthase 1 (neuronal) 12 -116135361 BF447723 12q24.2-q24.31 Hs.654410 188

response to hypoxia

photoreceptor inner segment

nitric-oxide synthase activity

calmodulin binding

cytoplasm

cytoskeleton

arginine catabolic process

nitric oxide biosynthetic process

myoblast fusion

electron carrier activity

response to heat

FMN binding

negative regulation of calcium ion transport into cytosol

oxidoreductase activity

sarcoplasmic reticulum

heme binding

multicellular organismal response to stress

tetrahydrobiopterin binding

arginine binding

neurotransmitter biosynthetic process

sarcolemma

cell projection

dendritic spine

positive regulation of vasodilation

positive regulation of vasodilation

cadmium ion binding

metal ion binding

perinuclear region of cytoplasm

FAD binding

NADP or NADPH binding

oxidation reduction

regulation of cardiac muscle contraction

Arginine and proline metabolism

Metabolic pathways

Calcium signaling pathway

Long-term depression

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

Pathways in cancer

Small cell lung cancer

224737_x_at -0.305 7.429 -2.174 4.589e-02 0.380 -4.038 CCAR1 cell division cycle and apoptosis regulator 1 10 70150976 BG541830 10q21.3 Hs.49853 18

nuclear mRNA splicing, via spliceosome

nucleic acid binding

nucleus

cytoplasm

Golgi apparatus

apoptosis

cell cycle

perinuclear region of cytoplasm

 
227672_at 0.244 6.666 2.174 4.590e-02 0.380 -4.038 C8orf73 chromosome 8 open reading frame 73 8 -144719505 W67308 8q24.3 Hs.531406 3

binding

Golgi apparatus

 
221918_at -0.313 7.545 -2.174 4.590e-02 0.380 -4.038 PCTK2 PCTAIRE protein kinase 2 12 -95196170 AI742210 12q23.1 Hs.506415 11

nucleotide binding

cyclin-dependent protein kinase activity

ATP binding

protein amino acid phosphorylation

transferase activity

 
225594_at -0.498 6.589 -2.174 4.591e-02 0.380 -4.039 CREBZF CREB/ATF bZIP transcription factor 11 -85046257 AL038866 11q14 Hs.535319 Hs.595940 Hs.714910 12

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

response to virus

negative regulation of transcription

specific transcriptional repressor activity

sequence-specific DNA binding

negative regulation of gene expression, epigenetic

regulation of transcription factor activity

 
225418_at 0.232 6.457 2.174 4.592e-02 0.380 -4.039 PVRL2 poliovirus receptor-related 2 (herpesvirus entry mediator B) 19 50041232, 50041232 AI520949 19q13.2 Hs.655455 38

positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target

positive regulation of immunoglobulin mediated immune response

plasma membrane

cell-cell junction

zonula adherens

cell adhesion

homophilic cell adhesion

spermatid development

cell surface

coreceptor activity

integral to membrane

viral envelope fusion with host membrane

positive regulation of mast cell activation

susceptibility to natural killer cell mediated cytotoxicity

virion attachment, binding of host cell surface coreceptor

cell adhesion molecule binding

adhesion to symbiont

susceptibility to T cell mediated cytotoxicity

Cell adhesion molecules (CAMs)

Adherens junction

235402_at 0.255 5.136 2.174 4.592e-02 0.380 -4.039 C11orf66 chromosome 11 open reading frame 66 11 61005167 AI866146 11q12.2 Hs.502726 3    
213644_at -0.415 6.059 -2.174 4.593e-02 0.380 -4.039 CCDC46 coiled-coil domain containing 46 17 -61062119, -61062119 AI979276 17q24.1 Hs.408676 4    
203311_s_at -0.363 7.503 -2.173 4.597e-02 0.380 -4.040 ARF6 ADP-ribosylation factor 6 14 49429485 M57763 14q21.3 Hs.525330 Hs.682124 86

nucleotide binding

ruffle

liver development

GTPase activity

protein binding

GTP binding

intracellular

membrane fraction

cytoplasm

endosome

Golgi apparatus

plasma membrane

cell cortex

apoptosis

cell motion

cell adhesion

small GTPase mediated signal transduction

protein transport

vesicle-mediated transport

positive regulation of actin filament polymerization

cortical actin cytoskeleton organization

ruffle organization

regulation of Rac protein signal transduction

negative regulation of receptor-mediated endocytosis

Endocytosis

Fc gamma R-mediated phagocytosis

217771_at -0.451 4.486 -2.173 4.597e-02 0.380 -4.040 GOLM1 golgi membrane protein 1 9 -87830877, -87830877 NM_016548 9q21.33 Hs.494337 22

Golgi apparatus

integral to plasma membrane

membrane

 
200098_s_at -0.319 9.329 -2.173 4.598e-02 0.380 -4.040 ANAPC5 anaphase promoting complex subunit 5 12 -120230432, -120230432 T33068 12q24.31 Hs.7101 28

G2/M transition of mitotic cell cycle

mitotic anaphase

ubiquitin-protein ligase activity

binding

nucleoplasm

anaphase-promoting complex

cytosol

ubiquitin-dependent protein catabolic process

cell cycle

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

cell division

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

1560006_a_at 0.257 4.754 2.173 4.599e-02 0.380 -4.040 LOC646762 hypothetical LOC646762 7 -29652063 BG501482 7p14.3 Hs.30579 2    
212514_x_at -0.535 6.111 -2.173 4.601e-02 0.380 -4.040 DDX3X DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked X 41077594 R60068 Xp11.3-p11.23 Hs.719127 34

nucleotide binding

DNA binding

RNA binding

ATP-dependent RNA helicase activity

helicase activity

protein binding

ATP binding

nucleus

cytoplasm

plasma membrane

nuclear speck

hydrolase activity

interspecies interaction between organisms

RIG-I-like receptor signaling pathway

232181_at 0.497 7.420 2.173 4.601e-02 0.380 -4.040 LOC153346 hypothetical protein LOC153346 5   AU157049 5q33.1 Hs.483816 1    
204806_x_at 0.355 8.027 2.173 4.601e-02 0.380 -4.040 HLA-F major histocompatibility complex, class I, F 6 29799095, 29799095, 1143812, 1143812, 945922, 945922 NM_018950 6p21.3 Hs.519972 68

antigen processing and presentation of peptide antigen via MHC class I

immune response

membrane

integral to membrane

antigen processing and presentation

MHC class I receptor activity

MHC class I protein complex

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

225866_at -0.323 8.184 -2.172 4.608e-02 0.381 -4.042 BXDC1 brix domain containing 1 6 111409983 AA976536 6q21 Hs.372265 8

protein binding

nucleus

nucleolus

 
201156_s_at -0.248 5.787 -2.172 4.609e-02 0.381 -4.042 RAB5C RAB5C, member RAS oncogene family 17 -37530522 AF141304 17q21.2 Hs.650382 11

nucleotide binding

GTPase activity

protein binding

GTP binding

endosome

plasma membrane

endosome organization

small GTPase mediated signal transduction

protein transport

regulation of endocytosis

endocytic vesicle

melanosome

Endocytosis

206692_at 0.249 2.995 2.171 4.613e-02 0.381 -4.043 KCNJ10 potassium inwardly-rectifying channel, subfamily J, member 10 1 -158274656 NM_002241 1q22-q23 Hs.408960 25

nucleotide binding

voltage-gated ion channel activity

potassium channel activity

protein binding

ATP binding

integral to plasma membrane

ion transport

potassium ion transport

ATP-activated inward rectifier potassium channel activity

membrane

potassium ion binding

 
221295_at 0.234 4.973 2.171 4.613e-02 0.381 -4.043 CIDEA cell death-inducing DFFA-like effector a 18 12244317, 12244627 NM_001279 18 18p11.21 Hs.249129 15

temperature homeostasis

protein binding

intracellular

nucleus

cytoplasm

mitochondrion

mitochondrial envelope

lipid particle

DNA fragmentation involved in apoptosis

lipid metabolic process

cell death

DNA damage response, signal transduction resulting in induction of apoptosis

positive regulation of sequestering of triglyceride

lipid storage

negative regulation of transforming growth factor beta receptor signaling pathway

negative regulation of tumor necrosis factor production

protein homodimerization activity

negative regulation of apoptosis

negative regulation of cytokine secretion

negative regulation of lipid catabolic process

 
242178_at 0.238 2.847 2.171 4.615e-02 0.381 -4.043 LIPI lipase, member I 21 -14403005 AA528339 21q11.2 Hs.139907 4

extracellular region

lipid catabolic process

hydrolase activity

 
225589_at -0.450 5.587 -2.171 4.616e-02 0.381 -4.043 SH3RF1 SH3 domain containing ring finger 1 4 -170251981 AB040927 4q32.3-q33 Hs.301804 9

protein binding

cytoplasm

Golgi apparatus

zinc ion binding

ligase activity

lamellipodium

metal ion binding

perinuclear region of cytoplasm

 
211845_at 0.294 5.252 2.171 4.616e-02 0.381 -4.043 PVRL1 poliovirus receptor-related 1 (herpesvirus entry mediator C) 11 -119050308, -119036912, -119014017 AF110314 11q23.3 Hs.334846 42

extracellular region

plasma membrane

cell-cell adherens junction

immune response

homophilic cell adhesion

heterophilic cell adhesion

coreceptor activity

integral to membrane

protein homodimerization activity

interspecies interaction between organisms

entry of virus into host cell

cell adhesion molecule binding

Cell adhesion molecules (CAMs)

Adherens junction

231868_at 0.259 3.509 2.171 4.619e-02 0.381 -4.044 HOMEZ homeobox and leucine zipper encoding 14 -22812683 AA916857 14q11.2 Hs.632332 7

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

sequence-specific DNA binding

 
225186_at -0.406 4.850 -2.171 4.619e-02 0.381 -4.044 RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 2 -204014436, -204006783 BF114947 2q33 Hs.471162 13

nucleus

cytoplasm

cytoskeleton

plasma membrane

cell-matrix adhesion

signal transduction

lamellipodium

filopodium

 
203482_at -0.360 6.631 -2.170 4.619e-02 0.381 -4.044 FAM178A family with sequence similarity 178, member A 10 102662315, 102662315, 102662315 AL133215 10q24.31 Hs.447458 5    
204845_s_at 0.457 3.300 2.170 4.621e-02 0.381 -4.044 ENPEP glutamyl aminopeptidase (aminopeptidase A) 4 111616677 NM_001977 4q25 Hs.435765 25

angiogenesis

aminopeptidase activity

calcium ion binding

plasma membrane

integral to plasma membrane

brush border

proteolysis

cell-cell signaling

peptidase activity

metalloexopeptidase activity

zinc ion binding

cell proliferation

external side of plasma membrane

apical plasma membrane

cell migration

cytoplasmic vesicle

Renin-angiotensin system

217952_x_at -0.444 7.112 -2.170 4.622e-02 0.381 -4.044 PHF3 PHD finger protein 3 6 64414389 BF430956 6q12 Hs.348921 13

molecular_function

protein binding

cellular_component

nucleus

transcription

multicellular organismal development

zinc ion binding

metal ion binding

 
229364_at 0.275 5.156 2.170 4.623e-02 0.381 -4.045 LOC646870 hypothetical protein LOC646870 1   AI979338 1q25.1        
222623_s_at -0.445 7.764 -2.170 4.627e-02 0.381 -4.045 ZNF639 zinc finger protein 639 3 180524244 BF001614 3q26.33 Hs.632578 5

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
216233_at 0.238 2.194 2.170 4.627e-02 0.381 -4.045 CD163 CD163 molecule 12 -7514676 Z22970 12p13.3 Hs.504641 51

scavenger receptor activity

protein binding

extracellular region

plasma membrane

integral to plasma membrane

acute-phase response

inflammatory response

 
212850_s_at -0.581 5.496 -2.170 4.628e-02 0.381 -4.045 LRP4 low density lipoprotein receptor-related protein 4 11 -46834993 AA584297 11p11.2-p12 Hs.4930 7

receptor activity

calcium ion binding

cellular_component

endocytosis

biological_process

membrane

integral to membrane

 
241813_at -0.551 5.183 -2.170 4.628e-02 0.381 -4.045 MBD1 methyl-CpG binding domain protein 1 18 -46049213 BG252318 18q21 Hs.405610 40

transcription factor activity

transcription corepressor activity

protein binding

nucleus

transcription from RNA polymerase II promoter

zinc ion binding

methyl-CpG binding

negative regulation of transcription

nuclear speck

metal ion binding

 
227900_at -0.372 4.576 -2.169 4.628e-02 0.381 -4.045 CBLB Cas-Br-M (murine) ecotropic retroviral transforming sequence b 3 -106859798 AV701750 3q13.11 Hs.430589 44

signal transducer activity

calcium ion binding

protein binding

nucleus

cytoplasm

NLS-bearing substrate import into nucleus

immune response

cell surface receptor linked signal transduction

zinc ion binding

ligase activity

modification-dependent protein catabolic process

ErbB signaling pathway

Ubiquitin mediated proteolysis

Endocytosis

Jak-STAT signaling pathway

T cell receptor signaling pathway

Insulin signaling pathway

Pathways in cancer

Chronic myeloid leukemia

1553682_at 0.276 3.600 2.169 4.630e-02 0.381 -4.046 FBXL14 F-box and leucine-rich repeat protein 14 12 -1545420 NM_152441 12p13.33 Hs.367956 3

modification-dependent protein catabolic process

 
226333_at -0.716 7.149 -2.169 4.630e-02 0.381 -4.046 IL6R interleukin 6 receptor 1 152644292 AV700030 1q21 Hs.709210 132

hepatic immune response

monocyte chemotaxis

positive regulation of leukocyte chemotaxis

receptor activity

ciliary neurotrophic factor receptor activity

interleukin-6 receptor activity

receptor binding

extracellular region

plasma membrane

interleukin-6 receptor complex

acute-phase response

integral to membrane

apical plasma membrane

enzyme binding

endocrine pancreas development

endocrine pancreas development

positive regulation of chemokine production

positive regulation of interleukin-6 production

response to cytokine stimulus

positive regulation of tyrosine phosphorylation of Stat3 protein

protein homodimerization activity

regulation of apoptosis

positive regulation of osteoblast differentiation

positive regulation of anti-apoptosis

positive regulation of smooth muscle cell proliferation

positive regulation of peptidyl-tyrosine phosphorylation

defense response to Gram-negative bacterium

interleukin-6-mediated signaling pathway

ciliary neurotrophic factor binding

ciliary neurotrophic factor-mediated signaling pathway

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

Hematopoietic cell lineage

201649_at 0.408 6.531 2.169 4.631e-02 0.381 -4.046 UBE2L6 ubiquitin-conjugating enzyme E2L 6 11 -57075704, -57075704 NM_004223 11q12 Hs.425777 19

ubiquitin-protein ligase activity

protein binding

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

Parkinson's disease

206366_x_at 0.236 4.333 2.169 4.632e-02 0.381 -4.046 XCL1 chemokine (C motif) ligand 1 1 166812479 U23772 1q23 Hs.546295 39

extracellular region

extracellular space

cellular calcium ion homeostasis

chemotaxis

immune response

signal transduction

cell-cell signaling

chemokine activity

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

232490_s_at 0.201 4.874 2.169 4.633e-02 0.381 -4.046 PRUNE prune homolog (Drosophila) 1 149247596 U67085 1q21 Hs.78524 8

inorganic diphosphatase activity

protein binding

nucleus

cytoplasm

focal adhesion

hydrolase activity

cell junction

manganese ion binding

metal ion binding

Purine metabolism

224452_s_at -0.603 9.919 -2.169 4.633e-02 0.381 -4.046 C7orf70 chromosome 7 open reading frame 70 7 -6335564 BC006110 7p22.1 Hs.696146 4

nucleus

 
219381_at 0.355 3.372 2.169 4.637e-02 0.381 -4.047 C5orf42 chromosome 5 open reading frame 42 5 -37142086 NM_023073 5p13.2 Hs.170993 Hs.586199 Hs.643420 Hs.649870 Hs.649889 Hs.705282 4

membrane

integral to membrane

 
224736_at -0.371 7.832 -2.168 4.638e-02 0.381 -4.047 CCAR1 cell division cycle and apoptosis regulator 1 10 70150976 BE617899 10q21.3 Hs.49853 18

nuclear mRNA splicing, via spliceosome

nucleic acid binding

nucleus

cytoplasm

Golgi apparatus

apoptosis

cell cycle

perinuclear region of cytoplasm

 
220385_at -0.283 5.712 -2.168 4.638e-02 0.381 -4.047 JPH2 junctophilin 2 20 -42238870, -42173750 NM_020433 20q13.12 Hs.441737 11

protein binding

membrane fraction

microsome

plasma membrane

junctional sarcoplasmic reticulum membrane

integral to membrane

sarcoplasmic reticulum

Z disc

regulation of ryanodine-sensitive calcium-release channel activity

calcium ion transport into cytosol

 
219423_x_at 0.454 4.158 2.168 4.639e-02 0.381 -4.047 TNFRSF25 tumor necrosis factor receptor superfamily, member 25 1 -6446757, -6443800 NM_003790 1p36.2 Hs.462529 30

receptor activity

tumor necrosis factor receptor activity

protein binding

extracellular region

cytosol

plasma membrane

integral to plasma membrane

cell surface receptor linked signal transduction

induction of apoptosis by extracellular signals

regulation of apoptosis

Cytokine-cytokine receptor interaction

226346_at 0.278 4.704 2.168 4.639e-02 0.381 -4.047 MEX3A mex-3 homolog A (C. elegans) 1 -154308427 AA527151 1q22 Hs.591496 3

cytoplasmic mRNA processing body

RNA binding

protein binding

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
209690_s_at 0.321 4.329 2.168 4.641e-02 0.381 -4.048 DOK4 docking protein 4 16 -56063370 BF591163 16q21 Hs.279832 11

MAPKKK cascade

transmembrane receptor protein tyrosine kinase signaling protein activity

insulin receptor binding

transmembrane receptor protein tyrosine kinase signaling pathway

nervous system development

 
210802_s_at -0.351 6.511 -2.168 4.644e-02 0.382 -4.048 DIMT1L DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) 5 -61720107 BC002841 5q11-q14 Hs.719162 6

rRNA modification

rRNA (adenine-N6,N6-)-dimethyltransferase activity

RNA binding

nucleus

nucleolus

methyltransferase activity

transferase activity

 
1557734_s_at 0.250 3.275 2.168 4.645e-02 0.382 -4.049 LOC100130548 hypothetical protein LOC100130548 9   AL044130 9q34.2 Hs.671096 1    
235299_at -0.187 2.423 -2.168 4.646e-02 0.382 -4.049 SLC41A2 solute carrier family 41, member 2 12 -103721404 AI769269 12q23.3 Hs.577463 6

magnesium ion binding

plasma membrane

cation transport

cation transmembrane transporter activity

integral to membrane

 
218656_s_at 0.327 7.726 2.167 4.648e-02 0.382 -4.049 LHFP lipoma HMGIC fusion partner 13 -38815028 NM_005780 13q12 Hs.507798 8

DNA binding

membrane

integral to membrane

 
224948_at 0.252 11.648 2.167 4.650e-02 0.382 -4.050 MRPS24 mitochondrial ribosomal protein S24 7 -43872681 BF970023 7p14 Hs.284286 11

molecular_function

structural constituent of ribosome

protein binding

mitochondrion

mitochondrial large ribosomal subunit

mitochondrial small ribosomal subunit

ribosome

translation

biological_process

 
214340_at 0.251 5.040 2.167 4.652e-02 0.382 -4.050 ALOX12P2 arachidonate 12-lipoxygenase pseudogene 2 17 6697618 AF020774 17p13 Hs.378695 3    
216965_x_at 0.217 6.086 2.167 4.652e-02 0.382 -4.050 SPG20 spastic paraplegia 20 (Troyer syndrome) 13 -35773776, -35773776, -35773776 AL139377 13q13.3 Hs.440414 19

cell death

 
204272_at 0.535 4.112 2.167 4.652e-02 0.382 -4.050 LGALS4 lectin, galactoside-binding, soluble, 4 19 -43984150 NM_006149 19q13.2 Hs.5302 14

protein binding

sugar binding

cytosol

plasma membrane

cell adhesion

 
235245_at 0.287 5.176 2.167 4.653e-02 0.382 -4.050 TMEM92 transmembrane protein 92 17 45706831 AI990471 17q21.33 Hs.224630 4

membrane

integral to membrane

 
1555337_a_at 0.273 3.189 2.167 4.654e-02 0.382 -4.050 ZNF317 zinc finger protein 317 19 9112085 AF307097   Hs.465829 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
233870_at 0.207 5.218 2.166 4.656e-02 0.382 -4.051 NAV1 neuron navigator 1 1 199884072 AB033039 1q32.3 Hs.585374 10

nucleotide binding

cytoplasm

cytoskeleton

microtubule

multicellular organismal development

nervous system development

nucleoside-triphosphatase activity

cell differentiation

 
1559114_a_at 0.190 3.878 2.166 4.659e-02 0.382 -4.051 CXCR7 chemokine (C-X-C motif) receptor 7 2 237143118 BC038720 2q37.3 Hs.471751 21

receptor activity

G-protein coupled receptor activity

protein binding

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

biological_process

integral to membrane

interspecies interaction between organisms

 
60084_at -0.301 3.429 -2.166 4.660e-02 0.382 -4.051 CYLD cylindromatosis (turban tumor syndrome) 16 49333461, 49333529 AI453099 16q12.1 Hs.578973 54

structural constituent of ribosome

ubiquitin thiolesterase activity

intracellular

cytoplasm

ribosome

cytoskeleton

translation

ubiquitin-dependent protein catabolic process

cell cycle

peptidase activity

cysteine-type peptidase activity

perinuclear region of cytoplasm

RIG-I-like receptor signaling pathway

207257_at 0.207 4.767 2.166 4.661e-02 0.382 -4.052 EPO erythropoietin 7 100156358 NM_000799 7q22 Hs.2303 177

response to hypoxia

erythropoietin receptor binding

hormone activity

protein binding

extracellular region

extracellular space

regulation of transcription from RNA polymerase II promoter

apoptosis

signal transduction

embryo implantation

blood circulation

positive regulation of cell proliferation

erythrocyte differentiation

positive regulation of tyrosine phosphorylation of Stat5 protein

hemoglobin biosynthetic process

positive regulation of gene-specific transcription

erythrocyte maturation

positive regulation of DNA replication

positive regulation of Ras protein signal transduction

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

Hematopoietic cell lineage

224631_at -0.411 6.839 -2.166 4.662e-02 0.382 -4.052 ZFP91 zinc finger protein 91 homolog (mouse) 11 58103162 AA758013 11q12 Hs.524920 10

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
1555659_a_at 0.256 5.232 2.165 4.665e-02 0.382 -4.052 TREML1 triggering receptor expressed on myeloid cells-like 1 6 -41225319 AF534823 6p21.1 Hs.117331 14

receptor activity

protein binding

cytoplasm

plasma membrane

cell surface

integral to membrane

integral to membrane

platelet activation

platelet alpha granule

innate immune response

 
213966_at 0.203 4.575 2.165 4.667e-02 0.382 -4.053 HMG20B high-mobility group 20B 19 3523942 N25429 19p13.3 Hs.406534 18

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

cell cycle

chromatin modification

 
217294_s_at -0.544 7.776 -2.165 4.668e-02 0.382 -4.053 ENO1 enolase 1, (alpha) 1 -8843649 U88968 1p36.3-p36.2 Hs.517145 69

phosphopyruvate hydratase complex

negative regulation of transcription from RNA polymerase II promoter

magnesium ion binding

transcription factor activity

transcription corepressor activity

serine-type endopeptidase activity

phosphopyruvate hydratase activity

protein binding

nucleus

cytoplasm

plasma membrane

glycolysis

lyase activity

negative regulation of cell growth

M band

regulation of transcription

Glycolysis / Gluconeogenesis

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

RNA degradation

1552576_at 0.273 3.870 2.165 4.669e-02 0.382 -4.053 ALMS1P Alstrom syndrome 1 pseudogene 2 73725553 NM_145300 2p13.1 Hs.278983 2    
219097_x_at -0.272 7.127 -2.164 4.673e-02 0.382 -4.054 C19orf42 chromosome 19 open reading frame 42 19 -16617958 NM_024104 19p13.11 Hs.356467 1

membrane

integral to membrane

 
238058_at -0.434 9.301 -2.164 4.677e-02 0.383 -4.055 LOC150381 hypothetical LOC150381 22 44828389 AA603041 22q13.31 Hs.659113 1    
205637_s_at 0.283 4.831 2.164 4.678e-02 0.383 -4.055 SH3GL3 SH3-domain GRB2-like 3 15 81907094 NM_003027 15q24 Hs.270055 Hs.666365 25

cytoplasm

endosome

endocytosis

signal transduction

central nervous system development

lipid binding

membrane

identical protein binding

Endocytosis

205444_at -1.282 10.528 -2.164 4.679e-02 0.383 -4.055 ATP2A1 ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 16 28797309 NM_004320 16p12.1 Hs.657344 41

nucleotide binding

magnesium ion binding

calcium-transporting ATPase activity

calcium ion binding

protein binding

ATP binding

microsome

ATP biosynthetic process

cation transport

metabolic process

apoptotic mitochondrial changes

membrane

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

positive regulation of fast-twitch skeletal muscle fiber contraction

elevation of endoplasmic reticulum calcium ion concentration

reduction of endoplasmic reticulum calcium ion concentration

sarcoplasmic reticulum membrane

sarcoplasmic reticulum membrane

calcium channel complex

response to endoplasmic reticulum stress

protein homodimerization activity

elevation of mitochondrial calcium ion concentration

maintenance of mitochondrion location

apoptosis in response to endoplasmic reticulum stress

calcium ion import

Calcium signaling pathway

Alzheimer's disease

243027_at 0.267 2.633 2.164 4.679e-02 0.383 -4.055 IGSF5 immunoglobulin superfamily, member 5 21 40039203 AI824021 21q22.2 Hs.422120 3

plasma membrane

tight junction

integral to membrane

cell junction

Tight junction

Epithelial cell signaling in Helicobacter pylori infection

212093_s_at -0.541 7.051 -2.164 4.679e-02 0.383 -4.055 MTUS1 mitochondrial tumor suppressor 1 8 -17545583, -17545583, -17545583 AI695017 8p22 Hs.7946 11

nucleus

mitochondrion

Golgi apparatus

plasma membrane

 
1565337_at 0.199 2.730 2.163 4.682e-02 0.383 -4.055 DNAH6 dynein, axonemal, heavy chain 6 2 84597089 AJ132086 2p11.2 Hs.249972 7

nucleotide binding

microtubule motor activity

ATP binding

microtubule

microtubule-based movement

ATPase activity

dynein complex

 
225004_at -0.285 6.971 -2.163 4.684e-02 0.383 -4.056 TMEM101 transmembrane protein 101 17 -39444081 AL525613 17q21.31 Hs.514211 3

signal transducer activity

cellular_component

membrane

integral to membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

 
1552639_at 0.282 4.947 2.163 4.687e-02 0.383 -4.056 KLHDC7B kelch domain containing 7B 22 49333327 NM_138433 22q13.33 Hs.137007 3    
213064_at -0.432 6.460 -2.163 4.687e-02 0.383 -4.056 ZC3H14 zinc finger CCCH-type containing 14 14 88099005, 88099443, 88130482 N64802 14q31.3 Hs.325846 7

RNA binding

nucleus

zinc ion binding

metal ion binding

 
238689_at 0.252 2.960 2.163 4.687e-02 0.383 -4.056 GPR110 G protein-coupled receptor 110 6 -47095580, -47075771 BG426455 6p12.3 Hs.256897 11

G-protein coupled receptor activity

G-protein coupled receptor activity

plasma membrane

neuropeptide signaling pathway

integral to membrane

integral to membrane

 
240301_at 0.249 3.841 2.163 4.688e-02 0.383 -4.057 DPPA2 developmental pluripotency associated 2 3 -110495325 AI204212 3q13.13 Hs.351113 6

nucleic acid binding

nucleus

 
1553551_s_at 0.203 13.655 2.162 4.691e-02 0.383 -4.057 ND2 MTND2 MT   NM_173709     43

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

oxygen and reactive oxygen species metabolic process

transport

NADH dehydrogenase (ubiquinone) activity

membrane

integral to membrane

oxidoreductase activity

electron transport chain

ATP synthesis coupled electron transport

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Parkinson's disease

228383_at -0.353 5.970 -2.162 4.696e-02 0.383 -4.058 PNPLA7 patatin-like phospholipase domain containing 7 9 -139474225 AK024443 9q34.3 Hs.294147 6

nucleus

mitochondrion

lysosome

endoplasmic reticulum

microsome

lipid metabolic process

metabolic process

membrane

integral to membrane

hydrolase activity

 
200668_s_at -0.404 9.995 -2.162 4.696e-02 0.383 -4.058 UBE2D3 ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast) 4 -103936216, -103936216, -103936216, -103936216, -103936216, -103936216 BC003395 4q24 Hs.518773 28

nucleotide binding

ubiquitin-protein ligase activity

protein binding

ATP binding

ubiquitin-dependent protein catabolic process

protein ubiquitination

ligase activity

BMP signaling pathway

regulation of protein metabolic process

Ubiquitin mediated proteolysis

201803_at -0.248 9.216 -2.162 4.696e-02 0.383 -4.058 POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 4 57539865 NM_000938 4q12 Hs.602757 92

magnesium ion binding

nuclear mRNA splicing, via spliceosome

DNA binding

DNA-directed RNA polymerase activity

protein binding

nucleus

nucleoplasm

DNA-directed RNA polymerase II, core complex

transcription

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

zinc ion binding

transferase activity

nucleotidyltransferase activity

ribonucleoside binding

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

Huntington's disease

214659_x_at -0.534 6.421 -2.162 4.697e-02 0.383 -4.058 YLPM1 YLP motif containing 1 14 74299821 AC007956 14q24.3 Hs.531111 11

molecular_function

cellular_component

nucleus

biological_process

nuclear speck

 
202164_s_at -0.499 5.757 -2.162 4.697e-02 0.383 -4.058 CNOT8 CCR4-NOT transcription complex, subunit 8 5 154218390 AF180476 5q31-q33 Hs.26703 16

nucleic acid binding

transcription factor activity

protein binding

intracellular

nucleus

cytoplasm

regulation of transcription, DNA-dependent

negative regulation of cell proliferation

RNA degradation

218815_s_at 0.215 5.326 2.161 4.699e-02 0.383 -4.059 TMEM51 transmembrane protein 51 1 15351614, 15352815 NM_018022 1p36.21 Hs.465305 5

membrane

integral to membrane

 
243277_x_at 0.178 2.290 2.161 4.700e-02 0.383 -4.059 MECOM MDS1 and EVI1 complex locus 3 -170283980, -170283980, -170283980, -170283980 AI458437 3q24-q28 Hs.659873 Hs.719216 46

molecular_function

DNA binding

transcription factor activity

protein binding

intracellular

nucleus

multicellular organismal development

biological_process

zinc ion binding

metal ion binding

MAPK signaling pathway

Pathways in cancer

Chronic myeloid leukemia

206099_at 0.209 5.859 2.161 4.706e-02 0.383 -4.060 PRKCH protein kinase C, eta 14 60858267 NM_006255 14q22-q23 Hs.333907 65

nucleotide binding

protein kinase C activity

ATP binding

protein amino acid phosphorylation

intracellular signaling cascade

zinc ion binding

transferase activity

enzyme binding

diacylglycerol binding

metal ion binding

Vascular smooth muscle contraction

Tight junction

220023_at 0.227 4.280 2.161 4.706e-02 0.383 -4.060 APOB48R apolipoprotein B48 receptor 16 28413493 NM_018690 16p11 Hs.200333 4

receptor activity

plasma membrane

lipid metabolic process

triglyceride metabolic process

lipid transport

steroid metabolic process

cholesterol metabolic process

very-low-density lipoprotein receptor activity

very-low-density lipoprotein particle

low-density lipoprotein particle

chylomicron

 
224825_at -0.389 7.468 -2.161 4.706e-02 0.383 -4.060 DNTTIP1 deoxynucleotidyltransferase, terminal, interacting protein 1 20 43853982 AL050348 20q13.12 Hs.472852 7

nucleus

 
218128_at -0.475 5.937 -2.161 4.707e-02 0.383 -4.060 NFYB nuclear transcription factor Y, beta 12 -103034987 AU151875 12q22-q23 Hs.84928 38

transcription factor activity

protein binding

intracellular

nucleus

CCAAT-binding factor complex

sequence-specific DNA binding

positive regulation of transcription, DNA-dependent

Antigen processing and presentation

231301_at -0.207 2.101 -2.161 4.708e-02 0.383 -4.060 NUP54 nucleoporin 54kDa 4 -77254840 BE671244 4q21.1 Hs.430435 16

nucleocytoplasmic transporter activity

protein binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

protein targeting

nucleocytoplasmic transport

protein transport

membrane

mRNA transport

intracellular protein transmembrane transport

 
220752_at 0.252 2.655 2.160 4.711e-02 0.383 -4.061 LOC51145 erythrocyte transmembrane protein 9   NM_016158 9q33.3 Hs.104671 Hs.719591      
212169_at 0.360 8.166 2.160 4.711e-02 0.383 -4.061 FKBP9 FK506 binding protein 9, 63 kDa 7 32963529 AL050187 7p11.1 Hs.103934 7

peptidyl-prolyl cis-trans isomerase activity

calcium ion binding

endoplasmic reticulum

protein folding

isomerase activity

 
210855_at 0.215 4.501 2.160 4.713e-02 0.383 -4.061 GREB1 GREB1 protein 2 11591692, 11597530, 11600301 AF245390 2p25.1 Hs.467733 11

membrane

integral to membrane

 
218469_at -0.916 4.026 -2.160 4.713e-02 0.383 -4.061 GREM1 gremlin 1, cysteine knot superfamily, homolog (Xenopus laevis) 15 30797496 NM_013372 15q13-q15 Hs.40098 28

cytokine activity

protein binding

extracellular region

extracellular space

multicellular organismal development

nervous system development

 
236061_at 0.317 5.283 2.160 4.714e-02 0.383 -4.061 PRDM15 PR domain containing 15 21 -42094393, -42091453 BF058757 21q22.3 Hs.473893 Hs.711654 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
204661_at 0.352 5.109 2.160 4.717e-02 0.384 -4.062 CD52 CD52 molecule 1 26516997 NM_001803 1p36 Hs.276770 27

membrane fraction

plasma membrane

integral to plasma membrane

elevation of cytosolic calcium ion concentration

anchored to membrane

respiratory burst

 
1563533_at 0.486 5.103 2.159 4.718e-02 0.384 -4.062 GADL1 glutamate decarboxylase-like 1 3 -30742695 AL832766 3p24.1-p23 Hs.657052 1

lyase activity

carboxy-lyase activity

carboxylic acid metabolic process

pyridoxal phosphate binding

 
213784_at 0.244 5.530 2.159 4.720e-02 0.384 -4.062 RABL4 RAB, member of RAS oncogene family-like 4 22 -35484200 AL037167 22q13.1 Hs.415172 6

nucleotide binding

GTP binding

small GTPase mediated signal transduction

 
230019_s_at 0.298 6.171 2.159 4.721e-02 0.384 -4.063 PTCHD2 patched domain containing 2 1 11461881 AW206105 1p36.22 Hs.202355 6

hedgehog receptor activity

membrane

integral to membrane

 
232052_at -0.204 6.015 -2.159 4.723e-02 0.384 -4.063 LOC440944 hypothetical LOC440944 3 -9405536 AL110136 3p25.3 Hs.598958 Hs.652556 2    
211469_s_at 0.256 5.158 2.159 4.724e-02 0.384 -4.063 CXCR6 chemokine (C-X-C motif) receptor 6 3 45959976 U73531 3p21 Hs.34526 37

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

coreceptor activity

C-C chemokine receptor activity

C-X-C chemokine receptor activity

viral genome replication

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

219174_at -0.418 5.074 -2.159 4.726e-02 0.384 -4.064 IFT74 intraflagellar transport 74 homolog (Chlamydomonas) 9 26937036, 26937309, 26946370, 26946370 NM_025103 9p21.2 Hs.145402 8

cytoplasmic vesicle

 
233561_at 0.233 2.547 2.158 4.726e-02 0.384 -4.064 SH3TC2 SH3 domain and tetratricopeptide repeats 2 5 -148341905 AK023641 5q32 Hs.483784 15

binding

 
215752_at 0.218 3.466 2.158 4.727e-02 0.384 -4.064 SIK2 salt-inducible kinase 2 11 110978379 AK026682 11q23.1 Hs.269128 14

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

cytoplasm

Golgi apparatus

protein amino acid phosphorylation

protein kinase cascade

transferase activity

regulation of insulin receptor signaling pathway

 
204771_s_at -0.374 6.755 -2.158 4.727e-02 0.384 -4.064 TTF1 transcription termination factor, RNA polymerase I 9 -134240757 AI632304 9q34.13 Hs.54780 18

DNA binding

transcription termination factor activity

nucleus

nucleoplasm

nucleolus

transcription termination

negative regulation of DNA replication

regulation of transcription

 
230122_at 0.315 3.275 2.158 4.728e-02 0.384 -4.064 MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 10 21863107, 21863579 BE219716 10p12 Hs.30385 19

transcription factor activity

protein binding

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
210129_s_at 0.261 5.838 2.158 4.728e-02 0.384 -4.064 TTLL3 tubulin tyrosine ligase-like family, member 3 3 9826903 AF078842 3p25.3 Hs.709359 7

tubulin-tyrosine ligase activity

cilium

protein modification process

microtubule cytoskeleton

protein polyglycylation

axoneme assembly

cilium axoneme

cilium assembly

protein-glycine ligase activity, initiating

 
215266_at 0.302 5.700 2.158 4.730e-02 0.384 -4.064 DNAH3 dynein, axonemal, heavy chain 3 16 -20851976 AL096732 16p12.3 Hs.526500 7

nucleotide binding

ciliary or flagellar motility

microtubule motor activity

ATP binding

axonemal dynein complex

microtubule

cilium

microtubule-based movement

ATPase activity

cilium axoneme

Huntington's disease

203789_s_at -1.037 8.170 -2.158 4.731e-02 0.384 -4.064 SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 7 -80209789 NM_006379 7q21-q31 Hs.269109 15

neural crest cell migration

blood vessel remodeling

receptor activity

extracellular region

extracellular space

immune response

heart development

post-embryonic development

membrane

semaphorin receptor binding

response to drug

Axon guidance

212107_s_at -0.344 5.151 -2.158 4.731e-02 0.384 -4.065 DHX9 DEAH (Asp-Glu-Ala-His) box polypeptide 9 1 181075073 BE561014 1q25 Hs.191518 57

nucleotide binding

nuclear mRNA splicing, via spliceosome

DNA binding

double-stranded RNA binding

ATP-dependent DNA helicase activity

ATP-dependent RNA helicase activity

protein binding

ATP binding

intracellular

nucleus

nucleolus

cytoplasm

centrosome

hydrolase activity

ribonucleoprotein complex

cellular response to heat

 
216521_s_at -0.524 5.597 -2.158 4.732e-02 0.384 -4.065 BRCC3 BRCA1/BRCA2-containing complex, subunit 3 X 153952903 S72931 Xq28 Hs.558537 19

nuclear ubiquitin ligase complex

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

protein binding

nucleus

double-strand break repair

response to DNA damage stimulus

peptidase activity

metallopeptidase activity

zinc ion binding

response to X-ray

chromatin modification

modification-dependent protein catabolic process

enzyme regulator activity

G2/M transition DNA damage checkpoint

polyubiquitin binding

positive regulation of DNA repair

metal ion binding

BRCA1-A complex

histone H2A K63-linked deubiquitination

histone H2A K63-linked deubiquitination

BRISC complex

 
212375_at -0.241 6.623 -2.158 4.733e-02 0.384 -4.065 EP400 E1A binding protein p400 12 131000460 AL563727 12q24.33 Hs.699245 19

nucleotide binding

DNA binding

helicase activity

ATP binding

nucleus

nucleolus

chromatin modification

hydrolase activity

NuA4 histone acetyltransferase complex

histone H4 acetylation

histone H2A acetylation

 
1553426_at 0.251 3.946 2.158 4.734e-02 0.384 -4.065 FLJ37543 hypothetical protein FLJ37543 5 60969392 NM_173667 5q12.1 Hs.683866 2

extracellular region

 
203744_at -0.626 6.139 -2.158 4.735e-02 0.384 -4.065 HMGB3 high-mobility group box 3 X 149902420 NM_005342 Xq28 Hs.19114 11

nucleus

chromosome

multicellular organismal development

DNA bending activity

negative regulation of B cell differentiation

negative regulation of myeloid cell differentiation

 
224416_s_at -0.338 5.640 -2.157 4.735e-02 0.384 -4.065 MED28 mediator complex subunit 28 4 17225370 AF358829 4p16 Hs.434075 Hs.644788 14

actin binding

protein binding

nucleus

cytoplasm

membrane

regulation of transcription

 
1555281_x_at -0.400 3.250 -2.157 4.737e-02 0.384 -4.066 ARMC8 armadillo repeat containing 8 3 139388837, 139388837 BC007934 3q22.3 Hs.719108 4

binding

 
1562924_at 0.267 4.233 2.157 4.738e-02 0.384 -4.066 LOC340357 hypothetical LOC340357 8 -12667941 BC043360 8p23.1 Hs.434302 1    
217874_at 0.264 10.903 2.157 4.738e-02 0.384 -4.066 SUCLG1 succinate-CoA ligase, alpha subunit 2 -84504162 NM_003849 2p11.2 Hs.270428 10

nucleotide binding

ATP citrate synthase activity

succinate-CoA ligase (ADP-forming) activity

succinate-CoA ligase (GDP-forming) activity

GTP binding

mitochondrion

mitochondrial inner membrane

mitochondrial matrix

tricarboxylic acid cycle

metabolic process

ligase activity

Citrate cycle (TCA cycle)

Propanoate metabolism

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

205994_at -0.297 4.077 -2.157 4.742e-02 0.384 -4.067 ELK4 ELK4, ETS-domain protein (SRF accessory protein 1) 1 -203855018, -203851857 NM_001973 1q32 Hs.497520 Hs.602654 21

transcription factor activity

transcription cofactor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

sequence-specific DNA binding

MAPK signaling pathway

1557349_at -0.174 3.585 -2.157 4.742e-02 0.384 -4.067 RERE arginine-glutamic acid dipeptide (RE) repeats 1 -8335050, -8335050 AK096094 1p36.2-p36.1 Hs.463041 17

histone deacetylase complex

transcription factor activity

nucleus

chromatin remodeling

regulation of transcription, DNA-dependent

NLS-bearing substrate import into nucleus

multicellular organismal development

poly-glutamine tract binding

zinc ion binding

sequence-specific DNA binding

metal ion binding

 
228713_s_at 0.264 5.273 2.157 4.742e-02 0.384 -4.067 HSD17B14 hydroxysteroid (17-beta) dehydrogenase 14 19 -54008085 AI742586 19q13.33 Hs.18788 8

estradiol 17-beta-dehydrogenase activity

protein binding

cytoplasm

cytosol

lipid metabolic process

steroid catabolic process

oxidoreductase activity

testosterone 17-beta-dehydrogenase (NADP+) activity

oxidation reduction

 
201363_s_at -0.586 6.360 -2.156 4.745e-02 0.384 -4.067 IVNS1ABP influenza virus NS1A binding protein 1 -183532144 AB020657 1q25.1-q31.1 Hs.497183 9

protein binding

nucleus

nucleoplasm

transcription factor complex

spliceosomal complex

cytoplasm

cytoskeleton

transcription from RNA polymerase III promoter

RNA splicing

response to virus

interspecies interaction between organisms

 
242512_at -0.452 5.363 -2.156 4.745e-02 0.384 -4.067 MYO9A myosin IXA 15 -69905414 AI382029 15q22-q23 Hs.546268 8

nucleotide binding

motor activity

actin binding

GTPase activator activity

protein binding

ATP binding

intracellular

intracellular signaling cascade

visual perception

zinc ion binding

membrane

integral to membrane

myosin complex

diacylglycerol binding

metal ion binding

 
237378_at 0.225 5.706 2.156 4.746e-02 0.384 -4.067 FLJ46321 FAM75-like protein FLJ46321 9 83793506 AL040781 9q21.32 Hs.209545  

membrane

integral to membrane

 
202143_s_at -0.328 9.678 -2.156 4.748e-02 0.384 -4.068 COPS8 COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis) 2 237658822 NM_006710 2q37.3 Hs.531713 23

nucleus

cytoplasm

signalosome

 
202536_at -0.467 7.541 -2.156 4.749e-02 0.384 -4.068 CHMP2B chromatin modifying protein 2B 3 87359102 AK002165 3p11.2 Hs.476930 36

intracellular

cytoplasm

endosome

cytosol

protein transport

membrane

protein domain specific binding

Endocytosis

223915_at 0.473 5.052 2.156 4.752e-02 0.384 -4.068 BCOR BCL6 co-repressor X -39795442, -39795442 AF317392 Xp21.2-p11.4 Hs.659681 19

transcription corepressor activity

transcription corepressor activity

ubiquitin-protein ligase activity

nucleus

heart development

transcription factor binding

chromatin modification

heat shock protein binding

PcG protein complex

odontogenesis

histone deacetylase binding

negative regulation of transcription, DNA-dependent

palate development

specification of axis polarity

 
228628_at 0.336 6.516 2.156 4.752e-02 0.384 -4.068 SRGAP2P1 SLIT-ROBO Rho GTPase activating protein 2 pseudogene 1 1   AI478268 1p11.2 Hs.523529 Hs.698027 2    
200607_s_at -0.389 6.981 -2.156 4.752e-02 0.384 -4.068 RAD21 RAD21 homolog (S. pombe) 8 -117927354 BG289967 8q24 Hs.81848 33

nuclear chromosome

protein binding

nucleus

double-strand break repair

apoptosis

response to DNA damage stimulus

cell cycle

chromosome segregation

mitosis

reciprocal meiotic recombination

cell division

Cell cycle

232245_at 1.167 8.406 2.155 4.754e-02 0.384 -4.069 SLC25A34 solute carrier family 25, member 34 1 15935395 AU151211 1p36.21 Hs.631867 3

binding

mitochondrion

mitochondrial inner membrane

transport

membrane

integral to membrane

 
201885_s_at -0.348 10.193 -2.155 4.758e-02 0.384 -4.070 CYB5R3 cytochrome b5 reductase 3 22 -41344757, -41344757 NM_000398 22q13.2-q13.31 22q13.31-qter Hs.700572 49

cytochrome-b5 reductase activity

cytoplasm

mitochondrion

mitochondrial outer membrane

mitochondrial inner membrane

endoplasmic reticulum

endoplasmic reticulum membrane

hemoglobin complex

cholesterol biosynthetic process

blood circulation

electron carrier activity

membrane

oxidoreductase activity

oxidation reduction

Amino sugar and nucleotide sugar metabolism

203683_s_at 0.374 6.853 2.155 4.759e-02 0.384 -4.070 VEGFB vascular endothelial growth factor B 11 63758841 NM_003377 11q13 Hs.78781 23

regulation of cell growth

vascular endothelial growth factor receptor binding

protein binding

extracellular region

extracellular region

signal transduction

growth factor activity

heparin binding

positive regulation of cell proliferation

membrane

platelet alpha granule lumen

Cytokine-cytokine receptor interaction

mTOR signaling pathway

Focal adhesion

Pathways in cancer

Renal cell carcinoma

Pancreatic cancer

Bladder cancer

209970_x_at 0.303 5.261 2.155 4.761e-02 0.384 -4.070 CASP1 caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase) 11 -104401446 M87507 11q23 Hs.2490 134

cysteine-type endopeptidase activity

protein binding

intracellular

cytoplasm

proteolysis

signal transduction

peptidase activity

caspase activator activity

regulation of apoptosis

positive regulation of I-kappaB kinase/NF-kappaB cascade

Amyotrophic lateral sclerosis (ALS)

217112_at 0.196 4.100 2.155 4.761e-02 0.384 -4.070 PDGFB platelet-derived growth factor beta polypeptide (simian sarcoma viral (v-sis) oncogene homolog) 22 -37949632, -37949632 Z81010 22q12.3-q13.1 22q13.1 Hs.1976 140

response to hypoxia

positive regulation of endothelial cell proliferation

monocyte chemotaxis

platelet-derived growth factor receptor binding

collagen binding

extracellular region

extracellular region

cytoplasm

substrate-bound cell migration

transforming growth factor beta receptor signaling pathway

growth factor activity

response to wounding

cell surface

negative regulation of phosphatidylinositol biosynthetic process

negative regulation of platelet activation

positive regulation of smooth muscle cell migration

membrane

cell growth

cell projection assembly

actin cytoskeleton organization

negative regulation of cell migration

platelet dense granule lumen

protein homodimerization activity

positive regulation of MAP kinase activity

cell surface binding

positive regulation of blood vessel endothelial cell migration

positive regulation of DNA replication

protein heterodimerization activity

platelet-derived growth factor receptor signaling pathway

positive regulation of fibroblast proliferation

platelet-derived growth factor binding

regulation of peptidyl-tyrosine phosphorylation

positive regulation of chemotaxis

cell chemotaxis

MAPK signaling pathway

Cytokine-cytokine receptor interaction

Focal adhesion

Gap junction

Regulation of actin cytoskeleton

Pathways in cancer

Renal cell carcinoma

Glioma

Prostate cancer

Melanoma

211062_s_at 0.188 6.147 2.154 4.763e-02 0.384 -4.070 CPZ carboxypeptidase Z 4 8645334 BC006393 4p16.1 Hs.78068 8

metallocarboxypeptidase activity

extracellular region

proteinaceous extracellular matrix

proteolysis

peptidase activity

metallopeptidase activity

zinc ion binding

Wnt receptor signaling pathway

metal ion binding

 
225225_at -0.252 10.855 -2.154 4.763e-02 0.384 -4.070 LOC729082 hypothetical protein LOC729082 15 39363492 BF791544 15q15.1 Hs.380164 2    
223608_at 0.550 6.228 2.154 4.763e-02 0.384 -4.070 EFCAB2 EF-hand calcium binding domain 2 1 243199793, 243199906, 243200253, 243200253 BC005357 1q44 Hs.134857 5

calcium ion binding

 
212622_at -0.385 7.450 -2.154 4.764e-02 0.384 -4.071 TMEM41B transmembrane protein 41B 11 -9258777 N64760 11p15.4 Hs.594563 4

membrane

integral to membrane

 
223072_s_at 0.244 7.061 2.154 4.765e-02 0.384 -4.071 WBP1 WW domain binding protein 1 2 74539084 U79457 2p12 Hs.516114 9

protein binding

protein binding

biological_process

integral to membrane

WW domain binding

WW domain binding

 
230038_at 0.387 4.932 2.154 4.768e-02 0.384 -4.071 ATXN7L2 ataxin 7-like 2 1 109828083 N93313 1p13.3 Hs.118248 2    
209718_at 0.225 5.870 2.154 4.768e-02 0.384 -4.071 NCAPH2 non-SMC condensin II complex, subunit H2 22 49293510, 49293510 BC001298 22q13.33 Hs.180903 5

nucleus

chromosome condensation

 
236146_at -0.332 4.327 -2.154 4.769e-02 0.384 -4.072 SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 6 -86380411, -86380411, -86374221, -86374221, -86374221, -86374221 BF593158 6q14-q15 Hs.571177 33

nucleotide binding

RNA binding

protein binding

nucleus

nucleoplasm

spliceosomal complex

cytoplasm

endoplasmic reticulum

microsome

mRNA processing

poly(A) RNA binding

RNA splicing

interspecies interaction between organisms

 
209249_s_at -0.278 11.307 -2.154 4.770e-02 0.384 -4.072 GHITM growth hormone inducible transmembrane protein 10 85889164 AF131820 10q23.1 Hs.352656 15

molecular_function

biological_process

membrane

integral to membrane

 
224822_at 0.289 6.747 2.154 4.771e-02 0.384 -4.072 DLC1 deleted in liver cancer 1 8 -13116452, -12985242, -12985242 AA524250 8p22 Hs.134296 48

neural tube closure

heart morphogenesis

GTPase activator activity

protein binding

intracellular

nucleus

cytoplasm

caveola

focal adhesion

induction of apoptosis

activation of caspase activity

signal transduction

negative regulation of cell proliferation

negative regulation of cell proliferation

regulation of cell shape

hindbrain morphogenesis

negative regulation of cell migration

negative regulation of cell migration

Rac GTPase activator activity

forebrain development

regulation of actin cytoskeleton organization

negative regulation of Rho protein signal transduction

positive regulation of protein amino acid dephosphorylation

SH2 domain binding

focal adhesion formation

negative regulation of stress fiber formation

 
233403_x_at 0.272 5.279 2.153 4.773e-02 0.384 -4.072 TM6SF2 transmembrane 6 superfamily member 2 19 -19236173 AK026307 19p13.3-p12 Hs.531624 6

molecular_function

biological_process

membrane

integral to membrane

 
216217_at 0.294 5.384 2.153 4.774e-02 0.384 -4.072 PLCL2 phospholipase C-like 2 3 16901455, 16949585 AK023546 3p24.3 Hs.202010 7

phosphoinositide phospholipase C activity

signal transducer activity

calcium ion binding

cytoplasm

lipid metabolic process

intracellular signaling cascade

 
207851_s_at -0.311 4.924 -2.153 4.775e-02 0.384 -4.073 INSR insulin receptor 19 -7063265 NM_000208 19p13.3-p13.2 Hs.465744 351

nucleotide binding

activation of MAPK activity

positive regulation of protein amino acid phosphorylation

heart morphogenesis

receptor signaling protein tyrosine kinase activity

receptor activity

insulin receptor activity

insulin-like growth factor receptor binding

ATP binding

GTP binding

endosome

microsome

cytosol

plasma membrane

plasma membrane

insulin receptor complex

caveola

carbohydrate metabolic process

G-protein coupled receptor protein signaling pathway

positive regulation of cell proliferation

positive regulation of cell proliferation

insulin receptor signaling pathway

endosome membrane

transferase activity

peptidyl-tyrosine phosphorylation

transformation of host cell by virus

protein phosphatase binding

male sex determination

positive regulation of cell migration

insulin-like growth factor I binding

insulin-like growth factor II binding

activation of protein kinase B activity

regulation of gene-specific transcription

SH2 domain binding

glucose homeostasis

positive regulation of MAPKKK cascade

3-phosphoinositide-dependent protein kinase binding

phosphoinositide 3-kinase binding

insulin binding

insulin receptor substrate binding

positive regulation of nitric oxide biosynthetic process

positive regulation of glycogen biosynthetic process

positive regulation of DNA replication

positive regulation of glycolysis

positive regulation of mitosis

regulation of embryonic development

positive regulation of glucose import

positive regulation of glucose import

protein amino acid autophosphorylation

positive regulation of developmental growth

protein heterotetramerization

PTB domain binding

positive regulation of protein kinase B signaling cascade

positive regulation of respiratory burst

Adherens junction

Insulin signaling pathway

Type II diabetes mellitus

202738_s_at -0.601 8.619 -2.153 4.777e-02 0.384 -4.073 PHKB phosphorylase kinase, beta 16 46052710 BG149218 16q12-q13 Hs.78060 13

catalytic activity

calmodulin binding

plasma membrane

carbohydrate metabolic process

glycogen metabolic process

generation of precursor metabolites and energy

Calcium signaling pathway

Insulin signaling pathway

228931_at -0.390 6.277 -2.153 4.778e-02 0.384 -4.073 COQ4 coenzyme Q4 homolog (S. cerevisiae) 9 130124611 AW628685 9q34.11 Hs.98541 9

mitochondrion

ubiquinone biosynthetic process

 
207303_at 0.218 3.652 2.153 4.780e-02 0.384 -4.074 PDE1C phosphodiesterase 1C, calmodulin-dependent 70kDa 7 -31795771 NM_005020 7p14.3 Hs.655694 10

calmodulin-dependent cyclic-nucleotide phosphodiesterase activity

calmodulin binding

signal transduction

hydrolase activity

Purine metabolism

Calcium signaling pathway

Olfactory transduction

205874_at 0.312 5.142 2.153 4.780e-02 0.384 -4.074 ITPKA inositol 1,4,5-trisphosphate 3-kinase A 15 39573413 NM_002220 15q14-q21 Hs.2722 18

nucleotide binding

calmodulin binding

ATP binding

inositol metabolic process

signal transduction

inositol trisphosphate 3-kinase activity

kinase activity

transferase activity

Inositol phosphate metabolism

Metabolic pathways

Calcium signaling pathway

Phosphatidylinositol signaling system

204281_at -0.273 8.533 -2.152 4.781e-02 0.384 -4.074 TEAD4 TEA domain family member 4 12 2938756, 2939222 NM_003213 12p13.3-p13.2 Hs.94865 16

skeletal system development

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

muscle organ development

 
1563796_s_at -0.437 5.161 -2.152 4.781e-02 0.384 -4.074 EARS2 glutamyl-tRNA synthetase 2, mitochondrial (putative) 16 -23440834 AK095998 16p12.2 Hs.620541 6

nucleotide binding

RNA binding

glutamate-tRNA ligase activity

ATP binding

cytoplasm

mitochondrion

mitochondrial matrix

glutamyl-tRNA aminoacylation

ligase activity

Porphyrin and chlorophyll metabolism

Aminoacyl-tRNA biosynthesis

Metabolic pathways

201852_x_at -1.008 7.589 -2.152 4.782e-02 0.384 -4.074 COL3A1 collagen, type III, alpha 1 2 189547343 AI813758 2q31 Hs.443625 Hs.708235 130

integrin binding

integrin binding

extracellular matrix structural constituent

protein binding

extracellular region

collagen

collagen type III

collagen type III

extracellular space

extracellular space

cell-matrix adhesion

transforming growth factor beta receptor signaling pathway

integrin-mediated signaling pathway

heart development

response to radiation

peptide cross-linking

platelet activation

collagen fibril organization

collagen fibril organization

collagen biosynthetic process

collagen biosynthetic process

response to cytokine stimulus

wound healing

wound healing

fibril organization

skin development

platelet-derived growth factor binding

negative regulation of immune response

Focal adhesion

ECM-receptor interaction

235315_at -0.314 4.044 -2.152 4.782e-02 0.384 -4.074 TSC22D1 TSC22 domain family, member 1 13 -43905658, -43905654 AI809519 13q14 Hs.507916 23

transcription factor activity

protein binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

 
231880_at -0.434 8.152 -2.152 4.784e-02 0.384 -4.074 FAM40B family with sequence similarity 40, member B 7 128861509, 128861509 AB032996 7q32.1 Hs.489988 9

molecular_function

cellular_component

biological_process

 
230914_at 0.290 4.040 2.152 4.784e-02 0.384 -4.074 HNF4A hepatocyte nuclear factor 4, alpha 20 42417854, 42417854, 42463337, 42463337 AI032108 20q12-q13.1 Hs.116462 217

transcription factor activity

steroid hormone receptor activity

receptor binding

steroid binding

fatty acid binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

ornithine metabolic process

xenobiotic metabolic process

blood coagulation

zinc ion binding

negative regulation of cell proliferation

positive regulation of specific transcription from RNA polymerase II promoter

regulation of lipid metabolic process

negative regulation of cell growth

protein homodimerization activity

sequence-specific DNA binding

metal ion binding

lipid homeostasis

Maturity onset diabetes of the young

207245_at 0.222 2.163 2.151 4.790e-02 0.385 -4.075 UGT2B17 UDP glucuronosyltransferase 2 family, polypeptide B17 4 -69085497 NM_001077 4q13 Hs.575083 29

membrane fraction

endoplasmic reticulum

microsome

metabolic process

steroid metabolic process

glucuronosyltransferase activity

membrane

integral to membrane

Pentose and glucuronate interconversions

Ascorbate and aldarate metabolism

Androgen and estrogen metabolism

Starch and sucrose metabolism

Retinol metabolism

Porphyrin and chlorophyll metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

Drug metabolism - other enzymes

Metabolic pathways

222099_s_at -0.288 7.078 -2.151 4.792e-02 0.385 -4.076 LSM14A LSM14A, SCD6 homolog A (S. cerevisiae) 19 39355191 AW593859 19q13.11 Hs.718430 6    
206635_at 0.236 6.983 2.151 4.793e-02 0.385 -4.076 CHRNB2 cholinergic receptor, nicotinic, beta 2 (neuronal) 1 152806880 NM_000748 1q21.3 Hs.2306 59

conditioned taste aversion

response to hypoxia

nicotinic acetylcholine-activated cation-selective channel activity

ion channel activity

extracellular ligand-gated ion channel activity

protein binding

plasma membrane

nicotinic acetylcholine-gated receptor-channel complex

ion transport

calcium ion transport

smooth muscle contraction

signal transduction

synaptic transmission, cholinergic

visual perception

sensory perception of sound

memory

locomotory behavior

visual learning

external side of plasma membrane

acetylcholine receptor activity

integral to membrane

sensory perception of pain

vestibulocochlear nerve development

optic nerve morphogenesis

lateral geniculate nucleus development

central nervous system projection neuron axonogenesis

cell junction

positive regulation of B cell proliferation

positive regulation of synaptic transmission, dopaminergic

positive regulation of dopamine secretion

behavioral response to nicotine

social behavior

regulation of dopamine metabolic process

B cell activation

response to cocaine

regulation of circadian sleep/wake cycle, REM sleep

regulation of circadian sleep/wake cycle, non-REM sleep

synapse

postsynaptic membrane

response to ethanol

negative regulation of action potential

regulation of dendrite morphogenesis

cognition

membrane depolarization

regulation of synaptogenesis

synaptic transmission involved in micturition

 
202083_s_at -0.436 5.899 -2.151 4.794e-02 0.385 -4.076 SEC14L1 SEC14-like 1 (S. cerevisiae) 17 72648599, 72692889 AI017770 17q25.1-q25.2 Hs.464184 11

binding

Golgi apparatus

membrane

 
203740_at 0.392 7.753 2.151 4.795e-02 0.385 -4.076 MPHOSPH6 M-phase phosphoprotein 6 16 -80739267 NM_005792 16q23.3 Hs.344400 11

M phase of mitotic cell cycle

protein binding

nucleus

nucleolus

cytoplasm

RNA degradation

218845_at -0.275 8.105 -2.151 4.795e-02 0.385 -4.076 DUSP22 dual specificity phosphatase 22 6 237100 NM_020185 6p25.3 Hs.29106 13

inactivation of MAPK activity

protein tyrosine phosphatase activity

protein binding

nucleus

cytoplasm

protein amino acid dephosphorylation

apoptosis

transforming growth factor beta receptor signaling pathway

multicellular organismal development

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

regulation of cell proliferation

positive regulation of JNK cascade

 
216651_s_at 0.238 3.650 2.150 4.801e-02 0.385 -4.077 GAD2 glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa) 10 26545241, 26545241 X69936 10p11.23 Hs.231829 62

glutamate decarboxylase activity

protein binding

cytoplasm

Golgi apparatus

cytosol

plasma membrane

glutamate decarboxylation to succinate

synaptic transmission

lyase activity

carboxylic acid metabolic process

cell junction

pyridoxal phosphate binding

cytoplasmic vesicle

neurotransmitter biosynthetic process

synapse

Alanine, aspartate and glutamate metabolism

beta-Alanine metabolism

Taurine and hypotaurine metabolism

Butanoate metabolism

Metabolic pathways

Type I diabetes mellitus

219884_at 0.311 5.923 2.150 4.802e-02 0.385 -4.077 LHX6 LIM homeobox 6 9 -124004678 NM_014368 9q33.2 Hs.103137 11

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

cerebral cortex radially oriented cell migration

cerebral cortex tangential migration

cerebral cortex GABAergic interneuron migration

sequence-specific DNA binding

metal ion binding

cell maturation

 
1569269_s_at 0.250 3.816 2.150 4.802e-02 0.385 -4.077 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 12 62524807 BM912471 12q14.2 Hs.210751 Hs.593803 8

GTPase activator activity

intracellular

signal transduction

Axon guidance

206076_at -0.330 5.596 -2.150 4.803e-02 0.385 -4.078 LRRC23 leucine rich repeat containing 23 12 6884157 NM_006992 12p13 Hs.155586 10

molecular_function

protein binding

cellular_component

biological_process

 
233918_at 0.192 5.921 2.150 4.804e-02 0.385 -4.078 DCDC2B doublecortin domain containing 2B 1 32447281 AI924786 1p35.1 Hs.424588 1

intracellular signaling cascade

 
226157_at -0.407 7.296 -2.150 4.806e-02 0.385 -4.078 TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) 3 -143154017 AI569747 3q23 Hs.379018 14

transcription factor activity

transcription cofactor activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

cell cycle

protein domain specific binding

Cell cycle

241198_s_at 0.190 2.629 2.150 4.806e-02 0.385 -4.078 C11orf70 chromosome 11 open reading frame 70 11 101423408 BE645435 11q22.1 Hs.98328 3    
222118_at -0.333 3.093 -2.150 4.808e-02 0.385 -4.078 CENPN centromere protein N 16 79597603, 79597603, 79597603 AK023669 16q23.2 Hs.55028 9

chromosome, centromeric region

condensed chromosome kinetochore

nucleus

chromosome

 
221558_s_at 0.330 3.979 2.149 4.808e-02 0.385 -4.079 LEF1 lymphoid enhancer-binding factor 1 4 -109188149 AF288571 4q23-q25 Hs.719332 85

negative regulation of transcription from RNA polymerase II promoter

somitogenesis

epithelial to mesenchymal transition

placenta development

chromatin binding

RNA polymerase II transcription factor activity, enhancer binding

protein binding

nucleus

transcription factor complex

nucleolus

cytoplasm

DNA bending activity

transcription activator activity

dentate gyrus development

regulation of Wnt receptor signaling pathway

embryonic limb morphogenesis

mammary gland development

odontogenesis of dentine-containing tooth

sequence-specific DNA binding

regulation of transcription

negative regulation of striated muscle development

positive regulation of transcription from RNA polymerase II promoter

paraxial mesoderm formation

cell development

palate development

Wnt signaling pathway

Adherens junction

Melanogenesis

Pathways in cancer

Colorectal cancer

Endometrial cancer

Prostate cancer

Thyroid cancer

Basal cell carcinoma

Acute myeloid leukemia

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

229776_at 0.256 5.650 2.149 4.808e-02 0.385 -4.079 SLCO3A1 solute carrier organic anion transporter family, member 3A1 15 90197941, 90197941 AW138118 15q26 Hs.311187 10

transporter activity

ion transport

membrane

integral to membrane

 
1555923_a_at 0.205 3.904 2.149 4.810e-02 0.385 -4.079 C10orf114 chromosome 10 open reading frame 114 10 -21823426 BQ007522 10p12.31 Hs.315568 3    
223726_at 0.210 6.530 2.149 4.810e-02 0.385 -4.079 KCNH3 potassium voltage-gated channel, subfamily H (eag-related), member 3 12 48219206 AB022696 12q13 Hs.64064 4

two-component sensor activity

two-component signal transduction system (phosphorelay)

voltage-gated ion channel activity

voltage-gated potassium channel activity

regulation of transcription, DNA-dependent

ion transport

potassium ion transport

membrane

integral to membrane

potassium ion binding

 
1568629_s_at 0.270 7.774 2.149 4.811e-02 0.385 -4.079 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 19 18125015 BC033311 19q13.2-q13.4 Hs.371344 68

protein binding

intracellular

cytosol

phosphoinositide 3-kinase complex

signal transduction

1-phosphatidylinositol-3-kinase activity

negative regulation of anti-apoptosis

phosphoinositide 3-kinase regulator activity

ErbB signaling pathway

Chemokine signaling pathway

Phosphatidylinositol signaling system

mTOR signaling pathway

Apoptosis

VEGF signaling pathway

Focal adhesion

Toll-like receptor signaling pathway

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Insulin signaling pathway

Type II diabetes mellitus

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Chronic myeloid leukemia

Acute myeloid leukemia

Small cell lung cancer

Non-small cell lung cancer

203925_at -0.772 7.373 -2.149 4.812e-02 0.385 -4.079 GCLM glutamate-cysteine ligase, modifier subunit 1 -94125177 NM_002061 1p22.1 Hs.315562 40

glutamate-cysteine ligase activity

glutamate-cysteine ligase activity

protein binding

soluble fraction

cytosol

cysteine metabolic process

glutamate metabolic process

glutathione biosynthetic process

glutathione biosynthetic process

response to oxidative stress

oxidoreductase activity

glutamate-cysteine ligase complex

glutamate-cysteine ligase catalytic subunit binding

positive regulation of glutamate-cysteine ligase activity

response to drug

negative regulation of neuron apoptosis

protein heterodimerization activity

regulation of blood vessel size

response to nitrosative stress

regulation of mitochondrial depolarization

oxidation reduction

Glutathione metabolism

Metabolic pathways

205061_s_at 0.297 7.259 2.149 4.814e-02 0.385 -4.080 EXOSC9 exosome component 9 4 122941921 NM_005033 4q27 Hs.91728 17

3'-5'-exoribonuclease activity

nuclear exosome (RNase complex)

RNA binding

exonuclease activity

protein binding

nucleus

nucleolus

cytoplasm

rRNA processing

RNA processing

immune response

hydrolase activity

RNA degradation

201524_x_at -0.224 9.600 -2.149 4.815e-02 0.385 -4.080 UBE2N ubiquitin-conjugating enzyme E2N (UBC13 homolog, yeast) 12 -92326218 NM_003348 12q22 Hs.524630 37

nucleotide binding

double-strand break repair via homologous recombination

DNA double-strand break processing

ubiquitin-protein ligase activity

protein binding

ATP binding

nucleus

cytoplasm

postreplication repair

proteolysis

response to DNA damage stimulus

ligase activity

modification-dependent protein catabolic process

positive regulation of histone modification

UBC13-MMS2 complex

regulation of histone ubiquitination

positive regulation of I-kappaB kinase/NF-kappaB cascade

ubiquitin binding

positive regulation of DNA repair

T cell receptor signaling pathway

positive regulation of NF-kappaB transcription factor activity

regulation of protein metabolic process

positive regulation of ubiquitin-protein ligase activity

Ubiquitin mediated proteolysis

205222_at 0.918 4.020 2.149 4.816e-02 0.385 -4.080 EHHADH enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase 3 -186391105 NM_001966 3q26.3-q28 Hs.429879 9

3-hydroxyacyl-CoA dehydrogenase activity

dodecenoyl-CoA delta-isomerase activity

enoyl-CoA hydratase activity

binding

mitochondrion

peroxisome

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

oxidoreductase activity

lyase activity

isomerase activity

coenzyme binding

oxidation reduction

Fatty acid metabolism

Valine, leucine and isoleucine degradation

Lysine degradation

Tryptophan metabolism

beta-Alanine metabolism

Benzoate degradation via CoA ligation

Propanoate metabolism

Butanoate metabolism

Limonene and pinene degradation

Caprolactam degradation

Metabolic pathways

PPAR signaling pathway

225974_at -0.881 6.270 -2.148 4.817e-02 0.385 -4.080 TMEM64 transmembrane protein 64 8 -91703398 BF732480 8q21.3 Hs.567759 2

membrane

integral to membrane

 
208209_s_at 0.259 4.459 2.148 4.818e-02 0.385 -4.080 C4BPB complement component 4 binding protein, beta 1 205328834, 205329206, 205329250 NM_000716 1q32 Hs.99886 23

extracellular region

complement activation, classical pathway

blood coagulation

innate immune response

Complement and coagulation cascades

223176_at -0.448 5.931 -2.148 4.819e-02 0.385 -4.080 KCTD20 potassium channel tetramerisation domain containing 20 6 36518521 BC003697 6p21.31 Hs.188757 4

voltage-gated potassium channel activity

potassium ion transport

voltage-gated potassium channel complex

membrane

identical protein binding

 
204744_s_at 0.465 9.932 2.148 4.822e-02 0.385 -4.081 IARS isoleucyl-tRNA synthetase 9 -94012445, -94012445 NM_013417 9q21 Hs.445403 13

nucleotide binding

isoleucine-tRNA ligase activity

ATP binding

soluble fraction

cytoplasm

isoleucyl-tRNA aminoacylation

zinc ion binding

ligase activity

Valine, leucine and isoleucine biosynthesis

Aminoacyl-tRNA biosynthesis

223495_at 0.399 4.972 2.148 4.822e-02 0.385 -4.081 CCDC8 coiled-coil domain containing 8 19 -51605426 AI970823 19q13.32 Hs.97876 4

plasma membrane

 
235774_at 0.277 3.858 2.148 4.823e-02 0.385 -4.081 LOC553137 hypothetical LOC553137 6 -107324697 AV699047 6q21 Hs.597380 Hs.652438 1    
208147_s_at 0.285 2.458 2.147 4.827e-02 0.386 -4.082 CYP2C8 cytochrome P450, family 2, subfamily C, polypeptide 8 10 -96786518 NM_030878 10q23.33 Hs.709188 97

monooxygenase activity

endoplasmic reticulum

microsome

electron carrier activity

membrane

heme binding

metal ion binding

oxidation reduction

aromatase activity

Arachidonic acid metabolism

Linoleic acid metabolism

Retinol metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

Metabolic pathways

205284_at -0.320 6.224 -2.147 4.827e-02 0.386 -4.082 URB2 URB2 ribosome biogenesis 2 homolog (S. cerevisiae) 1 227828603 NM_014777 1q42.13 Hs.533628 5

nucleus

nucleolus

 
208917_x_at 0.285 5.273 2.147 4.828e-02 0.386 -4.082 NADK NAD kinase 1 -1672530 BE674658 1p36.33-p36.21 Hs.654792 12

nucleotide binding

NAD+ kinase activity

NAD+ kinase activity

protein binding

ATP binding

cytosol

cytosol

metabolic process

phosphorylation

transferase activity

NAD metabolic process

ATP metabolic process

metal ion binding

Nicotinate and nicotinamide metabolism

Metabolic pathways

1558573_at 0.327 3.337 2.147 4.833e-02 0.386 -4.083 MCTS1 malignant T cell amplified sequence 1 X 119621771, 119622579 AF456465 Xq22-q24 Hs.102696 Hs.670803 12

RNA binding

cytoplasm

response to DNA damage stimulus

cell cycle

positive regulation of cell proliferation

regulation of growth

regulation of transcription

 
215726_s_at 0.386 7.190 2.146 4.839e-02 0.386 -4.084 CYB5A cytochrome b5 type A (microsomal) 18 -70071506 M22976 18q23 Hs.465413 38

aldo-keto reductase activity

cytochrome-c oxidase activity

cytoplasm

mitochondrion

mitochondrial outer membrane

endoplasmic reticulum

microsome

transport

membrane

integral to membrane

heme binding

electron transport chain

metal ion binding

 
210501_x_at 0.285 11.175 2.146 4.842e-02 0.386 -4.085 EIF3K eukaryotic translation initiation factor 3, subunit K 19 43801561 AF119846 19q13.2 Hs.314359 15

translation initiation factor activity

translation initiation factor activity

protein binding

nucleus

cytoplasm

cytosol

eukaryotic translation initiation factor 3 complex

regulation of translational initiation

ribosome binding

 
222128_at 0.353 4.525 2.145 4.846e-02 0.387 -4.085 NSUN6 NOL1/NOP2/Sun domain family, member 6 10 -18874269 U80764 10p12.31 Hs.396175 4

RNA binding

methyltransferase activity

transferase activity

 
213603_s_at 0.361 5.445 2.145 4.847e-02 0.387 -4.086 RAC2 ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) 22 -35951255 BE138888 22q13.1 Hs.517601 58

nucleotide binding

GTPase activity

protein binding

GTP binding

intracellular

membrane fraction

nuclear envelope

cytoplasm

chemotaxis

signal transduction

small GTPase mediated signal transduction

positive regulation of cell proliferation

regulation of hydrogen peroxide metabolic process

cell projection assembly

actin cytoskeleton organization

regulation of respiratory burst

MAPK signaling pathway

Chemokine signaling pathway

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Focal adhesion

Adherens junction

Natural killer cell mediated cytotoxicity

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Pathways in cancer

Colorectal cancer

Pancreatic cancer

241812_at -0.346 5.277 -2.145 4.847e-02 0.387 -4.086 SPATS2L spermatogenesis associated, serine-rich 2-like 2 200878848, 200879229, 200879600 AV648669 2q33.1 Hs.120323 9    
240072_at 0.325 3.737 2.145 4.848e-02 0.387 -4.086 ASXL2 additional sex combs like 2 (Drosophila) 2 -25815756 N75937 2p24.1 Hs.594386 6

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
218760_at -0.358 7.637 -2.145 4.848e-02 0.387 -4.086 COQ6 coenzyme Q6 homolog, monooxygenase (S. cerevisiae) 14 73486395, 73486708 NM_015940 14q24.3 Hs.632335 7

mitochondrion

ubiquinone biosynthetic process

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen

FAD binding

oxidation reduction

Ubiquinone and other terpenoid-quinone biosynthesis

Metabolic pathways

1558034_s_at 0.291 2.954 2.145 4.850e-02 0.387 -4.086 CP ceruloplasmin (ferroxidase) 3 -150372979 AL556703 3q23-q25 Hs.558314 95

ferroxidase activity

copper ion binding

extracellular region

extracellular space

ion transport

copper ion transport

cellular iron ion homeostasis

aging

response to nutrient

oxidoreductase activity

anchored to plasma membrane

metal ion binding

oxidation reduction

Porphyrin and chlorophyll metabolism

201593_s_at -0.384 8.638 -2.145 4.850e-02 0.387 -4.086 ZC3H15 zinc finger CCCH-type containing 15 2 187059129 AV716798 2q32.1 Hs.368598 3

nucleic acid binding

nucleus

cytoplasm

zinc ion binding

cytokine-mediated signaling pathway

metal ion binding

 
1557953_at -0.289 6.391 -2.145 4.852e-02 0.387 -4.086 ZKSCAN1 zinc finger with KRAB and SCAN domains 1 7 99451154 BG761185 7q21.3-q22.1 Hs.615360 11

transcription factor activity

intracellular

nucleus

cytoplasm

mitochondrion

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
217863_at -0.410 6.856 -2.145 4.852e-02 0.387 -4.086 PIAS1 protein inhibitor of activated STAT, 1 15 66133625 AI348378 15q Hs.162458 67

DNA binding

transcription coactivator activity

transcription corepressor activity

nucleus

JAK-STAT cascade

zinc ion binding

nuclear speck

SUMO ligase activity

enzyme binding

modification-dependent protein catabolic process

androgen receptor signaling pathway

positive regulation of protein sumoylation

regulation of transcription

positive regulation of transcription, DNA-dependent

metal ion binding

androgen receptor binding

Ubiquitin mediated proteolysis

Jak-STAT signaling pathway

Pathways in cancer

Small cell lung cancer

205594_at -0.558 6.699 -2.145 4.852e-02 0.387 -4.086 ZNF652 zinc finger protein 652 17 -44721567, -44721567 NM_014897 17q21.32-q21.33 Hs.463375 6

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
218669_at -0.346 7.493 -2.144 4.857e-02 0.387 -4.087 RAP2C RAP2C, member of RAS oncogene family X -131164733 NM_021183 Xq25 Hs.119889 5

nucleotide binding

GTP binding

intracellular

plasma membrane

small GTPase mediated signal transduction

 
212595_s_at -0.428 7.282 -2.144 4.859e-02 0.387 -4.088 DAZAP2 DAZ associated protein 2 12 49918774, 49918774 AL534321 12q12 Hs.369761 15

protein binding

WW domain binding

 
201629_s_at -0.292 7.905 -2.144 4.859e-02 0.387 -4.088 ACP1 acid phosphatase 1, soluble 2 254868, 254868 BE872974 2p25 Hs.558296 69

acid phosphatase activity

non-membrane spanning protein tyrosine phosphatase activity

soluble fraction

cytoplasm

protein amino acid dephosphorylation

hydrolase activity

identical protein binding

gamma-Hexachlorocyclohexane degradation

Riboflavin metabolism

Adherens junction

212447_at -0.413 8.214 -2.144 4.859e-02 0.387 -4.088 KBTBD2 kelch repeat and BTB (POZ) domain containing 2 7 -32874302 AF161402 7p14.3 Hs.372541 4

protein binding

 
224599_at -0.432 8.419 -2.144 4.859e-02 0.387 -4.088 CGGBP1 CGG triplet repeat binding protein 1 3 -88183789 BF979809 3p12-p11.1 Hs.444818 14

DNA binding

double-stranded DNA binding

nucleus

regulation of transcription

 
225579_at -0.393 6.230 -2.144 4.861e-02 0.387 -4.088 PQLC3 PQ loop repeat containing 3 2 11212990 AL516202 2p25.1 Hs.274415 5

membrane

integral to membrane

 
207950_s_at -0.541 5.136 -2.144 4.862e-02 0.387 -4.088 ANK3 ankyrin 3, node of Ranvier (ankyrin G) 10 -61458164, -61458164 NM_001149 10q21 Hs.499725 30

protein binding

cytoplasm

cytoskeleton

signal transduction

basolateral plasma membrane

establishment of protein localization

 
204870_s_at 0.295 3.579 2.144 4.862e-02 0.387 -4.088 PCSK2 proprotein convertase subtilisin/kexin type 2 20 17155630 NM_002594 20p11.2 Hs.315186 34

serine-type endopeptidase activity

protein binding

extracellular space

soluble fraction

proteolysis

nervous system development

peptidase activity

membrane

protein autoprocessing

insulin processing

secretory granule

cytoplasmic vesicle

enkephalin processing

islet amyloid polypeptide processing

 
211045_s_at 0.307 4.397 2.143 4.864e-02 0.387 -4.089 KCNH6 potassium voltage-gated channel, subfamily H (eag-related), member 6 17 58954426, 58954426 BC006334 17q23.3 Hs.591177 6

voltage-gated ion channel activity

voltage-gated potassium channel activity

regulation of transcription, DNA-dependent

ion transport

potassium ion transport

signal transduction

membrane

integral to membrane

potassium ion binding

 
1560834_a_at 0.209 4.971 2.143 4.864e-02 0.387 -4.089 RMST rhabdomyosarcoma 2 associated transcript (non-protein coding) 12 96382929 AF429305 12q21 12q23.1 Hs.652568 2    
225408_at 0.207 5.655 2.143 4.864e-02 0.387 -4.089 MBP myelin basic protein 18 -72853726, -72819776, -72819776 N21191 18q23 Hs.551713 102

plasma membrane

immune response

synaptic transmission

central nervous system development

structural constituent of myelin sheath

internode region of axon

myelination

cell projection

cell soma

myelin sheath

 
46665_at 0.350 6.653 2.143 4.866e-02 0.387 -4.089 SEMA4C sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C 2 -96889199 AI949392 2q11.2 Hs.516220 9

receptor activity

protein binding

multicellular organismal development

nervous system development

membrane

integral to membrane

cell differentiation

Axon guidance

40446_at -0.207 8.792 -2.143 4.867e-02 0.387 -4.089 PHF1 PHD finger protein 1 6 33486750 AL021366 6p21.3 Hs.166204 15

nucleic acid binding

transcription factor activity

protein binding

nucleus

zinc ion binding

chromatin modification

regulation of transcription

metal ion binding

 
244802_at 0.251 3.285 2.143 4.868e-02 0.387 -4.089 GLUD1 glutamate dehydrogenase 1 10 -88800222 AA909218 10q23.3 Hs.500409 53

nucleotide binding

glutamate dehydrogenase activity

glutamate dehydrogenase [NAD(P)+] activity

glutamate dehydrogenase [NAD(P)+] activity

ATP binding

GTP binding

cytoplasm

mitochondrion

mitochondrial matrix

mitochondrial matrix

cellular amino acid metabolic process

glutamate biosynthetic process

oxidoreductase activity

glutamate deamidation

positive regulation of insulin secretion

identical protein binding

ADP binding

oxidation reduction

NAD binding

leucine binding

Alanine, aspartate and glutamate metabolism

Arginine and proline metabolism

D-Glutamine and D-glutamate metabolism

Nitrogen metabolism

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Metabolic pathways

205759_s_at 0.308 4.742 2.143 4.868e-02 0.387 -4.089 SULT2B1 sulfotransferase family, cytosolic, 2B, member 1 19 53747240, 53770804 NM_004605 19q13.3 Hs.369331 29

alcohol sulfotransferase activity

protein binding

cytoplasm

cytosol

lipid metabolic process

steroid metabolic process

transferase activity

steroid sulfotransferase activity

Androgen and estrogen metabolism

Sulfur metabolism

212326_at -0.300 7.094 -2.143 4.870e-02 0.387 -4.090 VPS13D vacuolar protein sorting 13 homolog D (S. cerevisiae) 1 12212699 AB007922 1p36.22 Hs.439381 9

protein localization

 
38691_s_at 0.183 6.446 2.143 4.871e-02 0.387 -4.090 SFTPC surfactant protein C 8 22075128 J03553 8p21 Hs.1074 68

extracellular region

extracellular space

respiratory gaseous exchange

regulation of liquid surface tension

 
218397_at 0.355 6.817 2.143 4.871e-02 0.387 -4.090 FANCL Fanconi anemia, complementation group L 2 -58239881 NM_018062 2p16.1 Hs.631890 19

protein binding

nucleus

cytoplasm

DNA repair

response to DNA damage stimulus

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

Ubiquitin mediated proteolysis

231306_at 0.192 4.929 2.143 4.871e-02 0.387 -4.090 LYZL4 lysozyme-like 4 3 -42413578 AI989932 3p22.1 Hs.234895 3

lysozyme activity

extracellular region

cell wall macromolecule catabolic process

 
207998_s_at 0.263 4.853 2.142 4.875e-02 0.387 -4.091 CACNA1D calcium channel, voltage-dependent, L type, alpha 1D subunit 3 53504070 NM_000720 3p14.3 Hs.476358 25

voltage-gated ion channel activity

calcium ion binding

voltage-gated calcium channel complex

ion transport

calcium ion transport

dihydropyridine-sensitive calcium channel activity

membrane

integral to membrane

MAPK signaling pathway

Calcium signaling pathway

Cardiac muscle contraction

Vascular smooth muscle contraction

GnRH signaling pathway

Type II diabetes mellitus

Alzheimer's disease

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

214339_s_at 0.297 5.609 2.142 4.877e-02 0.387 -4.091 MAP4K1 mitogen-activated protein kinase kinase kinase kinase 1 19 -43770120 AA744529 19q13.1-q13.4 Hs.95424 29

nucleotide binding

activation of MAPKKK activity

protein serine/threonine kinase activity

small GTPase regulator activity

protein binding

ATP binding

response to stress

protein kinase cascade

activation of JUN kinase activity

MAP kinase kinase kinase kinase activity

transferase activity

peptidyl-serine phosphorylation

MAPK signaling pathway

203164_at -0.406 5.103 -2.142 4.878e-02 0.387 -4.091 SLC33A1 solute carrier family 33 (acetyl-CoA transporter), member 1 3 -157028064 BE464756 3q25.31 Hs.478031 5

membrane fraction

endoplasmic reticulum

endoplasmic reticulum membrane

integral to plasma membrane

transport

cell death

acetyl-CoA transporter activity

membrane

Glycosphingolipid biosynthesis - ganglio series

Metabolic pathways

1555787_at 0.227 4.156 2.142 4.878e-02 0.387 -4.091 C11orf63 chromosome 11 open reading frame 63 11 122258682, 122258682 BC009820 11q24.1 Hs.164705 3    
1555632_at 0.248 5.192 2.142 4.880e-02 0.387 -4.091 PIK3IP1 phosphoinositide-3-kinase interacting protein 1 22 -30007579 AF528079 22q12.2 Hs.26670 11

membrane

integral to membrane

 
206510_at -0.676 6.218 -2.141 4.883e-02 0.387 -4.092 SIX2 SIX homeobox 2 2 -45085828 AF332197 2p16-p15 Hs.101937 10

metanephros development

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

protein import into nucleus

multicellular organismal development

middle ear morphogenesis

sequence-specific DNA binding

negative regulation of cell differentiation

positive regulation of transcription from RNA polymerase II promoter

embryonic skeletal system morphogenesis

 
204421_s_at 0.391 4.871 2.141 4.886e-02 0.387 -4.092 FGF2 fibroblast growth factor 2 (basic) 4 123967312 M27968 4q26-q27 Hs.284244 320

activation of MAPKK activity

activation of MAPK activity

induction of an organ

positive regulation of protein amino acid phosphorylation

protein binding

extracellular region

extracellular region

extracellular space

apoptosis

chemotaxis

signal transduction

Ras protein signal transduction

multicellular organismal development

nervous system development

growth factor activity

heparin binding

negative regulation of cell proliferation

fibroblast growth factor receptor signaling pathway

organ morphogenesis

glial cell differentiation

positive regulation of granule cell precursor proliferation

lung development

positive regulation of blood vessel endothelial cell migration

negative regulation of blood vessel endothelial cell migration

positive regulation of cell differentiation

positive regulation of angiogenesis

regulation of retinal cell programmed cell death

positive regulation of epithelial cell proliferation

positive regulation of cardiac muscle cell proliferation

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

1561589_a_at -0.279 2.975 -2.141 4.886e-02 0.387 -4.092 NBEAL1 neurobeachin-like 1 2 203587846, 203708717 AB053319 2q33.2 Hs.604686 Hs.648846 6    
1554765_a_at 0.222 2.878 2.141 4.887e-02 0.387 -4.093 C11orf64 chromosome 11 open reading frame 64 11 60139799 BC029583 11q12.2 Hs.372650 2

membrane

integral to membrane

 
1554250_s_at 0.382 4.744 2.141 4.887e-02 0.387 -4.093 TRIM73 tripartite motif-containing 73 7 74862838 BC033812 7q11.23 Hs.632307 Hs.661254 5

protein binding

intracellular

zinc ion binding

metal ion binding

 
216452_at 0.268 3.680 2.140 4.895e-02 0.388 -4.094 TRPM3 transient receptor potential cation channel, subfamily M, member 3 9 -72588597, -72339785, -72339785 AB046836 9q21.12 Hs.47288 19

calcium channel activity

calcium ion binding

cation transport

calcium ion transport

membrane

integral to membrane

 
1552889_a_at 0.283 7.034 2.140 4.895e-02 0.388 -4.094 EXOC3L2 exocyst complex component 3-like 2 19 -50407718 NM_138568 19q13.32 Hs.337557 5    
1554564_a_at 0.223 4.942 2.140 4.896e-02 0.388 -4.094 UNQ1887 signal peptide peptidase 3 12 -119685417 BC011943 12q24.31 Hs.507087 Hs.683964 12

aspartic-type endopeptidase activity

peptidase activity

membrane

integral to membrane

 
202533_s_at -0.600 5.002 -2.140 4.900e-02 0.388 -4.095 DHFR dihydrofolate reductase 5 -79957800 BC003584 5q11.2-q13.2 Hs.592364 Hs.648635 80

dihydrofolate reductase activity

cellular_component

glycine biosynthetic process

one-carbon metabolic process

nucleotide biosynthetic process

oxidoreductase activity

NADP or NADPH binding

oxidation reduction

One carbon pool by folate

Folate biosynthesis

Biosynthesis of phenylpropanoids

Metabolic pathways

209216_at -0.370 8.568 -2.140 4.900e-02 0.388 -4.095 WDR45 WD repeat domain 45 X -48819035, -48819035 BC000464 Xp11.23 Hs.632807 8    
207809_s_at -0.259 7.198 -2.140 4.900e-02 0.388 -4.095 ATP6AP1 ATPase, H+ transporting, lysosomal accessory protein 1 X 153310171 NM_001183 Xq28 Hs.6551 22

nucleotide binding

transporter activity

ATP binding

vacuole

ion transport

ATP synthesis coupled proton transport

proton transport

membrane

integral to membrane

proton-transporting two-sector ATPase complex

proton-transporting V-type ATPase, V1 domain

hydrogen ion transporting ATP synthase activity, rotational mechanism

proton-transporting ATPase activity, rotational mechanism

Oxidative phosphorylation

Metabolic pathways

Lysosome

Vibrio cholerae infection

Epithelial cell signaling in Helicobacter pylori infection

226671_at -0.527 7.116 -2.139 4.900e-02 0.388 -4.095 LAMP2 lysosomal-associated membrane protein 2 X -119454376, -119444030 AI150000 Xq24 Hs.496684 52

membrane fraction

lysosomal membrane

late endosome

plasma membrane

plasma membrane

integral to membrane

platelet dense granule membrane

platelet dense granule membrane

Lysosome

223602_at -0.306 4.856 -2.139 4.901e-02 0.388 -4.095 USP30 ubiquitin specific peptidase 30 12 107974762 BC004868 12q24.11 Hs.486434 Hs.660996 7

ubiquitin thiolesterase activity

mitochondrion

mitochondrial outer membrane

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

membrane

integral to membrane

 
232253_at 0.343 6.864 2.139 4.903e-02 0.388 -4.095 C5orf56 chromosome 5 open reading frame 56 5 131774571 AL564637 5q31.1 Hs.658288 1    
224920_x_at 0.270 5.746 2.138 4.910e-02 0.388 -4.097 MYADM myeloid-associated differentiation marker 19 59061422, 59062948, 59064471, 59064592 AA909044 19q13.42 Hs.380906 10

membrane

integral to membrane

 
222086_s_at 0.212 4.139 2.138 4.912e-02 0.388 -4.097 WNT6 wingless-type MMTV integration site family, member 6 2 219432789 AI191771 2q35 Hs.29764 11

signal transducer activity

extracellular matrix structural constituent

protein binding

extracellular region

proteinaceous extracellular matrix

Wnt receptor signaling pathway, calcium modulating pathway

cell-cell signaling

multicellular organismal development

Wnt signaling pathway

Hedgehog signaling pathway

Melanogenesis

Pathways in cancer

Basal cell carcinoma

201501_s_at -0.381 8.926 -2.138 4.912e-02 0.388 -4.097 GRSF1 G-rich RNA sequence binding factor 1 4 -71900362, -71900362 NM_002092 4q13 Hs.309763 6

mRNA binding

cytoplasm

mRNA polyadenylation

 
205560_at 0.239 4.343 2.138 4.912e-02 0.388 -4.097 PCSK5 proprotein convertase subtilisin/kexin type 5 9 77695379 NM_006200 9q21.3 Hs.368542 40

kidney development

kidney development

renin secretion into blood stream

serine-type endopeptidase activity

extracellular region

extracellular space

Golgi apparatus

Golgi lumen

signal peptide processing

proteolysis

cell-cell signaling

heart development

embryo implantation

peptidase activity

anterior/posterior pattern formation

viral assembly, maturation, egress, and release

secretory granule

respiratory tube development

nerve growth factor processing

limb morphogenesis

cytokine biosynthetic process

peptide binding

peptide biosynthetic process

embryonic gut development

embryonic skeletal system development

 
221494_x_at 0.272 11.170 2.138 4.912e-02 0.388 -4.097 EIF3K eukaryotic translation initiation factor 3, subunit K 19 43801561 AF085358 19q13.2 Hs.314359 15

translation initiation factor activity

translation initiation factor activity

protein binding

nucleus

cytoplasm

cytosol

eukaryotic translation initiation factor 3 complex

regulation of translational initiation

ribosome binding

 
221597_s_at -0.344 6.834 -2.138 4.913e-02 0.388 -4.097 TMEM208 transmembrane protein 208 16 65818516 BC003080 16q22.1 Hs.433203 2

membrane

integral to membrane

 
212604_at 0.306 8.286 2.138 4.918e-02 0.389 -4.098 MRPS31 mitochondrial ribosomal protein S31 13 -40201431 AI937794 13q14.11 Hs.154655 8

mitochondrion

ribosome

protein domain specific binding

 
243386_at -0.326 7.551 -2.137 4.921e-02 0.389 -4.099 CASZ1 castor zinc finger 1 1 -10629856, -10619252 AI085338 1p36.22 Hs.439894 10

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
203910_at -0.383 8.369 -2.137 4.922e-02 0.389 -4.099 ARHGAP29 Rho GTPase activating protein 29 1 -94407050 NM_004815 1p22.1-p21.3 Hs.483238 8

GTPase activator activity

Rho GTPase activator activity

intracellular

intracellular signaling cascade

Rho protein signal transduction

zinc ion binding

diacylglycerol binding

metal ion binding

 
235464_at -0.250 3.380 -2.137 4.923e-02 0.389 -4.099 CSNK1A1 casein kinase 1, alpha 1 5 -148855037 AA010757 5q32 Hs.529862 Hs.712555 53

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

cytosol

protein amino acid phosphorylation

Wnt receptor signaling pathway

transferase activity

Wnt signaling pathway

Hedgehog signaling pathway

217742_s_at -0.259 7.767 -2.137 4.924e-02 0.389 -4.099 WAC WW domain containing adaptor with coiled-coil 10 28861432, 28862429 NM_016628   Hs.714700 15

protein binding

nucleus

nuclear speck

 
229586_at -0.321 7.065 -2.137 4.924e-02 0.389 -4.099 CHD9 chromodomain helicase DNA binding protein 9 16 51646445 AW300405 16q12.2 Hs.59159 Hs.622347 10

nucleotide binding

chromatin

DNA binding

chromatin binding

helicase activity

protein binding

ATP binding

nucleus

cytoplasm

chromatin assembly or disassembly

chromatin modification

hydrolase activity

regulation of transcription

 
239640_at 0.204 4.960 2.137 4.925e-02 0.389 -4.099 LOC401320 hypothetical LOC401320 7   AI221073 7p15.1 Hs.561708 2    
200857_s_at -0.355 6.731 -2.137 4.925e-02 0.389 -4.099 NCOR1 nuclear receptor co-repressor 1 17 -15875982 NM_006311 17p11.2 Hs.462323 112

transcription factor activity

transcription corepressor activity

nucleus

transcription from RNA polymerase II promoter

negative regulation of specific transcription from RNA polymerase II promoter

chromatin modification

protein domain specific binding

sequence-specific DNA binding

negative regulation of transcription, DNA-dependent

 
224567_x_at -0.549 11.875 -2.137 4.925e-02 0.389 -4.099 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 11 65021808 BG534952 11q13.1 Hs.642877 Hs.714394 8    
228976_at 0.366 5.536 2.137 4.926e-02 0.389 -4.099 ICOSLG inducible T-cell co-stimulator ligand 21 -44471149 AA778249 21q22.3 Hs.14155 29

receptor binding

defense response

immune response

hyperosmotic response

signal transduction

membrane

integral to membrane

positive regulation of activated T cell proliferation

T cell activation

B cell activation

Cell adhesion molecules (CAMs)

1553447_at -0.451 6.566 -2.137 4.926e-02 0.389 -4.100 AGBL1 ATP/GTP binding protein-like 1 15 84486245 NM_152336 15q25.3 Hs.679833 5

metallocarboxypeptidase activity

binding

cytoplasm

proteolysis

peptidase activity

metallopeptidase activity

zinc ion binding

metal ion binding

 
202916_s_at -0.320 7.009 -2.137 4.928e-02 0.389 -4.100 FAM20B family with sequence similarity 20, member B 1 177261696 NM_014864 1q25 Hs.719217 9

extracellular region

 
216927_at 0.249 4.545 2.136 4.928e-02 0.389 -4.100 KIAA0892 KIAA0892 19 19292629 AC003030 19p13.11 Hs.654939 Hs.713004 8

chromatin

protein binding

extracellular region

nucleus

nucleoplasm

cohesin loading complex

maintenance of mitotic sister chromatid cohesion

 
1552330_at -0.407 3.807 -2.136 4.929e-02 0.389 -4.100 MGC16385 hypothetical protein MGC16385 16 -88563701 NM_145039 16q24.3 Hs.513832 3

protein binding

 
213443_at 0.246 3.046 2.136 4.929e-02 0.389 -4.100 TRADD TNFRSF1A-associated via death domain 16 -65745589 N36774 16q22 Hs.460996 68

signal transducer activity

cytoplasm

cytosol

cytoskeleton

induction of apoptosis

signal transduction

activation of pro-apoptotic gene products

intermediate filament binding

kinase binding

tumor necrosis factor-mediated signaling pathway

identical protein binding

positive regulation of I-kappaB kinase/NF-kappaB cascade

receptor complex

positive regulation of hair follicle development

molecular adaptor activity

death domain binding

Apoptosis

RIG-I-like receptor signaling pathway

Adipocytokine signaling pathway

217912_at -0.277 8.380 -2.136 4.935e-02 0.389 -4.101 DUS1L dihydrouridine synthase 1-like (S. cerevisiae) 17 -77609039 NM_022156 17q25.3 Hs.514599 2

tRNA processing

oxidoreductase activity

tRNA dihydrouridine synthase activity

FAD binding

oxidation reduction

 
213483_at -0.361 6.027 -2.136 4.936e-02 0.389 -4.101 PPWD1 peptidylprolyl isomerase domain and WD repeat containing 1 5 64894886 AK025679 5q12.3 Hs.121432 5

peptidyl-prolyl cis-trans isomerase activity

spliceosomal complex

mRNA processing

protein folding

RNA splicing

isomerase activity

 
231862_at 0.297 3.674 2.136 4.937e-02 0.389 -4.101 CBX5 chromobox homolog 5 (HP1 alpha homolog, Drosophila) 12 -52910996, -52910996, -52910996 AK023520 12q13.13 Hs.349283 65

kinetochore

chromatin

chromatin binding

nucleus

nuclear envelope

nucleolus

cytoplasm

chromatin assembly or disassembly

chromocenter

negative regulation of transcription

general transcriptional repressor activity

PML body

enzyme binding

nuclear centromeric heterochromatin

 
1566079_at 0.276 5.582 2.136 4.937e-02 0.389 -4.101 RPS16P5 ribosomal protein S16 pseudogene 5 6   AL833001 6p12.1 Hs.675022 2    
228817_at -0.361 6.079 -2.136 4.937e-02 0.389 -4.102 ALG9 asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae) 11 -111158128, -111158128 AI085361 11q23 Hs.503850 15

endoplasmic reticulum

GPI anchor biosynthetic process

membrane

integral to membrane

transferase activity, transferring glycosyl groups

intrinsic to endoplasmic reticulum membrane

N-Glycan biosynthesis

Metabolic pathways

209140_x_at 0.461 10.715 2.135 4.938e-02 0.389 -4.102 HLA-B major histocompatibility complex, class I, B 6 -31429627, -2770844, -2569111 L42024 6p21.3 Hs.707171 Hs.77961 1101

antigen processing and presentation of peptide antigen via MHC class I

protein binding

membrane fraction

plasma membrane

integral to plasma membrane

defense response

immune response

immune response

membrane

integral to membrane

antigen processing and presentation

MHC class I receptor activity

MHC class I protein complex

interspecies interaction between organisms

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

201931_at 0.293 10.721 2.135 4.939e-02 0.389 -4.102 ETFA electron-transfer-flavoprotein, alpha polypeptide 15 -74295683 NM_000126 15q23-q25 Hs.39925 18

mitochondrion

mitochondrial matrix

transport

electron carrier activity

oxidoreductase activity

electron transport chain

FAD binding

 
1560767_at 0.315 5.206 2.135 4.939e-02 0.389 -4.102 HCG22 HLA complex group 22 6 31129962, 2473196, 2272081 AK094433 6p21.33 Hs.711596 1    
235260_s_at -0.573 5.641 -2.135 4.943e-02 0.389 -4.102 PACRGL PARK2 co-regulated-like 4 20311133 AA398590 4p15.31 Hs.479298 5

binding

 
1554634_at 0.224 2.427 2.135 4.943e-02 0.389 -4.102 PDS5B PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae) 13 32058591 BC039256 13q12.3 Hs.716441 15

chromatin

DNA binding

ATP binding

nucleus

cell cycle

mitotic sister chromatid cohesion

mitosis

negative regulation of cell proliferation

identical protein binding

cell division

 
200938_s_at 0.233 4.865 2.135 4.944e-02 0.389 -4.103 RERE arginine-glutamic acid dipeptide (RE) repeats 1 -8335050, -8335050 AI920976 1p36.2-p36.1 Hs.463041 17

histone deacetylase complex

transcription factor activity

nucleus

chromatin remodeling

regulation of transcription, DNA-dependent

NLS-bearing substrate import into nucleus

multicellular organismal development

poly-glutamine tract binding

zinc ion binding

sequence-specific DNA binding

metal ion binding

 
216954_x_at 0.319 8.791 2.134 4.948e-02 0.389 -4.103 ATP5O ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit 21 -34197626 S77356 21q22.1-q22.2 21q22.11 Hs.409140 12

transporter activity

mitochondrion

mitochondrial proton-transporting ATP synthase complex

mitochondrial proton-transporting ATP synthase complex

plasma membrane

ATP catabolic process

ion transport

drug binding

proton transport

ATPase activity

mitochondrial ATP synthesis coupled proton transport

proton-transporting ATP synthase complex, catalytic core F(1)

hydrogen ion transporting ATP synthase activity, rotational mechanism

proton-transporting ATPase activity, rotational mechanism

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

206939_at 0.222 3.396 2.134 4.949e-02 0.389 -4.103 DCC deleted in colorectal carcinoma 18 48120568 NM_005215 18q21.3 Hs.579550 62

neuron migration

transcription coactivator activity

netrin receptor activity

protein binding

apoptosis

induction of apoptosis

multicellular organismal development

axon guidance

membrane

integral to membrane

spinal cord ventral commissure morphogenesis

axon

Axon guidance

Pathways in cancer

Colorectal cancer

201630_s_at -0.361 8.765 -2.134 4.950e-02 0.389 -4.104 ACP1 acid phosphatase 1, soluble 2 254868, 254868 NM_004300 2p25 Hs.558296 69

acid phosphatase activity

non-membrane spanning protein tyrosine phosphatase activity

soluble fraction

cytoplasm

protein amino acid dephosphorylation

hydrolase activity

identical protein binding

gamma-Hexachlorocyclohexane degradation

Riboflavin metabolism

Adherens junction

213188_s_at -0.398 7.334 -2.134 4.950e-02 0.389 -4.104 MINA MYC induced nuclear antigen 3 -99143350, -99143350 AI823896 3q11.2 Hs.607776 15

nucleus

nucleolus

cytoplasm

ribosome biogenesis

 
221022_s_at 0.202 5.485 2.134 4.951e-02 0.389 -4.104 PMFBP1 polyamine modulated factor 1 binding protein 1 16 -70710497, -70710497 NM_031293 16q22.2 Hs.714939 10

cytoplasm

 
1560320_a_at 0.265 4.492 2.134 4.952e-02 0.389 -4.104 UNQ2963 hypothetical LOC283314 12 7152179 AL833364 12p13.31 Hs.715709 2    
226987_at 0.211 5.537 2.134 4.952e-02 0.389 -4.104 RBM15B RNA binding motif protein 15B 3 51403770 W68720 3p21.2 Hs.118738 6

nucleotide binding

regulation of alternative nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

nucleoplasm

nucleolus

mRNA processing

nucleocytoplasmic transport

RNA splicing

negative regulation of transcription

interspecies interaction between organisms

 
227954_at -0.304 6.163 -2.134 4.954e-02 0.389 -4.104 ITPRIPL2 inositol 1,4,5-triphosphate receptor interacting protein-like 2 16 19032754 AI458417 16p12.3 Hs.530899 Hs.648523 3

membrane

integral to membrane

 
216129_at 0.326 5.044 2.134 4.954e-02 0.389 -4.104 ATP9A ATPase, class II, type 9A 20 -49646720 AL117659 20q13.2 Hs.719117 6

nucleotide binding

magnesium ion binding

phospholipid-translocating ATPase activity

ATP binding

ATP biosynthetic process

metabolic process

ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism

phospholipid transport

membrane

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

 
231870_s_at -0.194 8.640 -2.134 4.955e-02 0.389 -4.105 NMD3 NMD3 homolog (S. cerevisiae) 3 162421792 BG291007 3q26.1 Hs.598836 8

nucleus

nucleoplasm

nucleolus

cytoplasm

protein transport

 
213467_at 0.286 4.709 2.134 4.956e-02 0.389 -4.105 RND2 Rho family GTPase 2 17 38430783 BF511718 17q21 Hs.603111 16

nucleotide binding

GTPase activity

protein binding

GTP binding

intracellular

plasma membrane

signal transduction

small GTPase mediated signal transduction

 
204652_s_at -0.270 5.531 -2.133 4.958e-02 0.389 -4.105 NRF1 nuclear respiratory factor 1 7 129038790, 129057154 NM_005011 7q32 Hs.654363 47

DNA binding

nucleus

generation of precursor metabolites and energy

regulation of transcription from RNA polymerase II promoter

regulation of transcription

Huntington's disease

215818_at 0.215 4.591 2.133 4.959e-02 0.389 -4.105 NUDT7 nudix (nucleoside diphosphate linked moiety X)-type motif 7 16 76313911, 76313911 AK026469 16q23.1 Hs.719356 2

magnesium ion binding

peroxisome

nucleoside diphosphate metabolic process

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

manganese ion binding

 
210732_s_at -0.446 2.848 -2.133 4.960e-02 0.389 -4.106 LGALS8 lectin, galactoside-binding, soluble, 8 1 234748187, 234753361, 234753699 AF342816 1q42-q43 Hs.4082 Hs.708114 29

sugar binding

extracellular space

cytoplasm

 
227731_at -0.582 7.974 -2.133 4.961e-02 0.389 -4.106 CNBP CCHC-type zinc finger, nucleic acid binding protein 3 -130369347 BF063728 3q21 Hs.518249 24

transcription factor activity

protein binding

cytoplasm

endoplasmic reticulum

regulation of transcription, DNA-dependent

cholesterol biosynthetic process

zinc ion binding

metal ion binding

 
237656_at 0.295 4.101 2.133 4.963e-02 0.389 -4.106 WWC2 WW and C2 domain containing 2 4 184257456 BG149582 4q35.1 Hs.333179 5

protein binding

 
208729_x_at 0.416 9.421 2.133 4.964e-02 0.389 -4.106 HLA-B major histocompatibility complex, class I, B 6 -31429627, -2770844, -2569111 D83043 6p21.3 Hs.707171 Hs.77961 1101

antigen processing and presentation of peptide antigen via MHC class I

protein binding

membrane fraction

plasma membrane

integral to plasma membrane

defense response

immune response

immune response

membrane

integral to membrane

antigen processing and presentation

MHC class I receptor activity

MHC class I protein complex

interspecies interaction between organisms

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

211752_s_at 0.312 10.483 2.133 4.965e-02 0.389 -4.106 NDUFS7 NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase) 19 1334882 BC005954 19p13.3 Hs.211914 20

NADH dehydrogenase activity

iron ion binding

protein binding

mitochondrion

mitochondrial respiratory chain complex I

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

transport

NADH dehydrogenase (ubiquinone) activity

oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor

electron transport chain

mitochondrial respiratory chain complex I assembly

metal ion binding

quinone binding

4 iron, 4 sulfur cluster binding

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

244317_at 0.432 4.230 2.133 4.965e-02 0.389 -4.106 KIAA1324L KIAA1324-like 7 -86347173, -86347173 BF035563 7q21.12 Hs.208093 3

G-protein coupled receptor activity

protein binding

G-protein coupled receptor protein signaling pathway

membrane

integral to membrane

 
221255_s_at 0.214 9.635 2.132 4.966e-02 0.389 -4.107 TMEM93 transmembrane protein 93 17 3518838 NM_031298 17p13.2 Hs.30011 3

membrane

integral to membrane

 
201040_at 0.328 6.118 2.132 4.967e-02 0.389 -4.107 GNAI2 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 3 50248650 NM_002070 3p21 Hs.77269 85

nucleotide binding

activation of MAPKK activity

adenosine receptor signaling pathway

GTPase activity

signal transducer activity

protein binding

GTP binding

membrane fraction

nucleus

cytosol

plasma membrane

signal transduction

inhibition of adenylate cyclase activity by G-protein signaling

muscarinic acetylcholine receptor signaling pathway

gamma-aminobutyric acid signaling pathway

protein kinase cascade

response to nutrient

positive regulation of cell proliferation

guanyl nucleotide binding

membrane raft

negative regulation of synaptic transmission

negative regulation of calcium ion transport via voltage-gated calcium channel activity

Chemokine signaling pathway

Axon guidance

Tight junction

Gap junction

Leukocyte transendothelial migration

Long-term depression

Melanogenesis

1554428_s_at 0.237 6.944 2.132 4.969e-02 0.389 -4.107 NLGN2 neuroligin 2 17 7252225 AF376802 17p13.1 Hs.26229 11

regulation of respiratory gaseous exchange by neurological system process

synaptogenesis

integral to membrane

cell-cell adhesion

neurexin binding

synapse

postsynaptic membrane

cell-cell junction maintenance

regulation of synaptic transmission

Cell adhesion molecules (CAMs)

213803_at -0.370 7.794 -2.132 4.971e-02 0.389 -4.107 KPNB1 karyopherin (importin) beta 1 17 43082273 BG545463 17q21.32 Hs.532793 Hs.706168 113

protein import into nucleus, docking

protein import into nucleus, translocation

nucleus

nuclear pore

nucleoplasm

cytoplasm

cytosol

NLS-bearing substrate import into nucleus

ribosomal protein import into nucleus

nuclear localization sequence binding

zinc ion binding

protein transporter activity

protein domain specific binding

interspecies interaction between organisms

 
213203_at -0.368 8.967 -2.132 4.971e-02 0.389 -4.107 SNAPC5 small nuclear RNA activating complex, polypeptide 5, 19kDa 15 -64569719 AI633709 15q22.31 Hs.30174 7

transcription factor activity

nucleus

transcription from RNA polymerase II promoter

transcription initiation from RNA polymerase III promoter

regulation of transcription

 
213514_s_at -0.269 6.710 -2.132 4.972e-02 0.389 -4.108 DIAPH1 diaphanous homolog 1 (Drosophila) 5 -140874771 AU158818 5q31 Hs.529451 33

actin binding

receptor binding

cytoplasm

cytoskeleton

plasma membrane

sensory perception of sound

cellular component organization

Rho GTPase binding

actin cytoskeleton organization

ruffle membrane

cell projection

Focal adhesion

Regulation of actin cytoskeleton

230059_at 0.213 5.766 2.131 4.976e-02 0.390 -4.108 DEAF1 deformed epidermal autoregulatory factor 1 (Drosophila) 11 -634224 AI052714 11p15.5 Hs.243994 15

DNA binding

binding

extracellular region

nucleus

transcription from RNA polymerase II promoter

germ cell development

zinc ion binding

anatomical structure morphogenesis

regulation of transcription

metal ion binding

 
205633_s_at 0.820 8.371 2.131 4.979e-02 0.390 -4.109 ALAS1 aminolevulinate, delta-, synthase 1 3 52207155, 52207183 NM_000688 3p21.1 Hs.476308 24

5-aminolevulinate synthase activity

mitochondrion

mitochondrial matrix

heme biosynthetic process

acyltransferase activity

transferase activity, transferring nitrogenous groups

pyridoxal phosphate binding

tetrapyrrole biosynthetic process

Glycine, serine and threonine metabolism

Porphyrin and chlorophyll metabolism

Metabolic pathways

219331_s_at 0.336 5.177 2.131 4.979e-02 0.390 -4.109 KLHDC8A kelch domain containing 8A 1 -203572270 NM_018203 1q32.1 Hs.10414 3    
1553126_a_at -0.293 2.614 -2.131 4.980e-02 0.390 -4.109 SLC39A12 solute carrier family 39 (zinc transporter), member 12 10 18280773 NM_152725 10p12.33 Hs.350895 4

ion transport

zinc ion transport

zinc ion binding

membrane

integral to membrane

metal ion transport

metal ion transmembrane transporter activity

 
212978_at -0.498 5.287 -2.131 4.981e-02 0.390 -4.109 LRRC8B leucine rich repeat containing 8 family, member B 1 89762984, 89796859 AU146004 1p22.2 Hs.482017 Hs.632420 6

protein binding

membrane

integral to membrane

 
222678_s_at -0.411 5.781 -2.131 4.983e-02 0.390 -4.109 DCUN1D1 DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) 3 -184143252 BF057821 3q26.3 Hs.715661 16

molecular_function

cellular_component

biological_process

modification-dependent protein catabolic process

 
221589_s_at 0.682 8.211 2.131 4.984e-02 0.390 -4.110 ALDH6A1 aldehyde dehydrogenase 6 family, member A1 14 -73596624 AW612403 14q24.3 Hs.293970 9

acyl-CoA binding

methylmalonate-semialdehyde dehydrogenase (acylating) activity

mitochondrion

valine metabolic process

oxidoreductase activity

malonate-semialdehyde dehydrogenase (acetylating) activity

thymine metabolic process

brown fat cell differentiation

oxidation reduction

Valine, leucine and isoleucine degradation

Inositol phosphate metabolism

Propanoate metabolism

Metabolic pathways

238034_at -0.328 6.690 -2.130 4.985e-02 0.390 -4.110 CANX calnexin 5 179058535 AI890021 5q35 Hs.699155 90

calcium ion binding

sugar binding

endoplasmic reticulum

protein folding

protein secretion

membrane

integral to membrane

melanosome

unfolded protein binding

Antigen processing and presentation

227840_at 0.347 5.525 2.130 4.986e-02 0.390 -4.110 C2orf76 chromosome 2 open reading frame 76 2 -119776489 AA738440 2q14.2 Hs.99488 1    
220120_s_at 0.297 2.656 2.130 4.988e-02 0.390 -4.110 EPB41L4A erythrocyte membrane protein band 4.1 like 4A 5 -111526213 NM_022140 5q22.1-q22.2 Hs.584954 7

binding

cellular_component

cytoplasm

cytoskeleton

cytoskeletal protein binding

biological_process

extrinsic to membrane

 
219928_s_at 0.272 3.368 2.130 4.989e-02 0.390 -4.110 CABYR calcium binding tyrosine-(Y)-phosphorylation regulated 18 19972952, 19973445 NM_012189 18q11.2 Hs.511983 11

calcium ion binding

nucleus

cytoplasm

cytoskeleton

cilium

signal transduction

cAMP-dependent protein kinase regulator activity

flagellum

 
209091_s_at -0.225 9.414 -2.130 4.989e-02 0.390 -4.110 SH3GLB1 SH3-domain GRB2-like endophilin B1 1 86942844 AF263293 1p22 Hs.136309 28

protein insertion into mitochondrial membrane during induction of apoptosis

fatty acid binding

protein binding

nucleus

cytoplasm

mitochondrion

mitochondrial outer membrane

microsome

Golgi apparatus

phosphatidic acid biosynthetic process

apoptosis

anti-apoptosis

phospholipid biosynthetic process

membrane

lysophosphatidic acid acyltransferase activity

protein homodimerization activity

protein complex

'de novo' posttranslational protein folding

Endocytosis

1570015_at 0.256 2.582 2.130 4.991e-02 0.390 -4.111 RP11-165H20.1 CHIA-like pseudogene 1 111624668 BC031662 1p13.2   1    
217824_at -0.315 5.019 -2.130 4.991e-02 0.390 -4.111 UBE2J1 ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast) 6 -90093062 AW500009 6q15 Hs.163776 12

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

endoplasmic reticulum

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

Parkinson's disease

212952_at -0.371 6.783 -2.129 4.995e-02 0.390 -4.111 CALR calreticulin 19 12910413 AA910371 19p13.3-p13.2 Hs.515162 126

negative regulation of transcription from RNA polymerase II promoter

complement component C1q binding

peptide antigen assembly with MHC class I protein complex

DNA binding

mRNA binding

integrin binding

calcium ion binding

sugar binding

extracellular region

proteinaceous extracellular matrix

extracellular space

nucleus

cytoplasm

endoplasmic reticulum

endoplasmic reticulum lumen

microsome

cytosol

polysome

regulation of transcription, DNA-dependent

protein export from nucleus

cell cycle arrest

zinc ion binding

positive regulation of cell proliferation

ferredoxin reductase activity

external side of plasma membrane

senescence

transcription repressor activity

negative regulation of translation

negative regulation of translation

protein maturation by protein folding

cortical actin cytoskeleton organization

negative regulation of steroid hormone receptor signaling pathway

regulation of meiosis

MHC class I peptide loading complex

glucocorticoid receptor signaling pathway

regulation of apoptosis

negative regulation of neuron differentiation

positive regulation of DNA replication

positive regulation of cell cycle

negative regulation of retinoic acid receptor signaling pathway

perinuclear region of cytoplasm

androgen receptor binding

positive regulation of phagocytosis

protein stabilization

unfolded protein binding

chaperone binding

sequestering of calcium ion

Antigen processing and presentation

236573_at 0.641 10.726 2.129 4.995e-02 0.390 -4.112 MIB1 mindbomb homolog 1 (Drosophila) 18 17575542 AI819052 18q11.2 Hs.140903 Hs.658808 15

blood vessel development

in utero embryonic development

somitogenesis

neural tube formation

heart looping

ubiquitin-protein ligase activity

protein binding

cytoplasm

plasma membrane

Notch signaling pathway

heart development

zinc ion binding

protein ubiquitination

ligase activity

modification-dependent protein catabolic process

cytoplasmic vesicle

negative regulation of neuron differentiation

positive regulation of endocytosis

metal ion binding

 
1564204_at 0.199 3.613 2.129 4.996e-02 0.390 -4.112 FAM91A2 family with sequence similarity 91, member A2 1   AK090660 1q21.1 Hs.710717 3    
226261_at -0.294 3.504 -2.129 4.996e-02 0.390 -4.112 ZNRF2 zinc and ring finger 2 7 30290447 AI831561 7p14.3 Hs.487869 4

protein binding

lysosome

endosome

plasma membrane

zinc ion binding

ligase activity

modification-dependent protein catabolic process

cell junction

synapse

metal ion binding

 
211748_x_at 0.729 9.220 2.129 4.997e-02 0.390 -4.112 PTGDS prostaglandin D2 synthase 21kDa (brain) 9 138991776 BC005939 9q34.2-q34.3 Hs.446429 63

prostaglandin biosynthetic process

prostaglandin-D synthase activity

transporter activity

binding

retinoid binding

extracellular region

nucleus

cytoplasm

rough endoplasmic reticulum

Golgi apparatus

fatty acid biosynthetic process

transport

membrane

isomerase activity

nuclear membrane

regulation of circadian sleep/wake cycle, sleep

perinuclear region of cytoplasm

Arachidonic acid metabolism

Metabolic pathways

1553268_at 0.291 4.238 2.129 4.998e-02 0.390 -4.112 RHBDL3 rhomboid, veinlet-like 3 (Drosophila) 17 27617307 NM_138328 17q11.2 Hs.655027 3

serine-type endopeptidase activity

calcium ion binding

signal transduction

peptidase activity

membrane

integral to membrane

 
225310_at -0.291 7.261 -2.129 4.999e-02 0.390 -4.112 RBMX RNA binding motif protein, X-linked X -135783284 AI928344 Xq26.3 Hs.380118 Hs.710162 32

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

spliceosomal complex

biological_process

RNA splicing

heterogeneous nuclear ribonucleoprotein complex

 

5729 Genes