Bioconductor Affymetrix Probe Listing

Probe log2FC AveExpr t P.Value adj.P.Val B Symbol Description Chromosome Chromosome Location GenBank Gene Cytoband UniGene PubMed Gene Ontology Pathway
217963_s_at 2.041 8.334 10.739 1.686e-08 0.001 9.003 NGFRAP1 nerve growth factor receptor (TNFRSF16) associated protein 1 X 102517923, 102518764 NM_014380 Xq22.2 Hs.448588 Hs.719133 17

protein binding

nucleus

cytoplasm

apoptosis

multicellular organismal development

metal ion binding

Neurotrophin signaling pathway

242414_at 1.435 5.714 10.398 2.607e-08 0.001 8.665 QPRT quinolinate phosphoribosyltransferase 16 29597941 AW960707 16p11.2 Hs.513484 8

nicotinate-nucleotide diphosphorylase (carboxylating) activity

nicotinate-nucleotide diphosphorylase (carboxylating) activity

cellular_component

cytosol

metabolic process

NAD biosynthetic process

transferase activity, transferring glycosyl groups

pyridine nucleotide biosynthetic process

quinolinate catabolic process

protein homodimerization activity

protein oligomerization

Nicotinate and nicotinamide metabolism

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Metabolic pathways

209075_s_at -1.025 11.329 -9.860 5.296e-08 0.001 8.106 ISCU iron-sulfur cluster scaffold homolog (E. coli) 12 107480423 AY009128 12q24.1 Hs.615131 14

iron ion binding

nucleus

cytoplasm

mitochondrion

cytosol

nitrogen fixation

iron-sulfur cluster assembly

protein complex scaffold

metal ion binding

iron-sulfur cluster binding

 
224324_at 1.109 5.004 9.833 5.497e-08 0.001 8.076 MRO maestro 18 -46575487, -46575487 AB042647 18q21 Hs.30495 6

binding

nucleus

nucleolus

 
224323_s_at 1.088 5.975 9.741 6.221e-08 0.001 7.977 MRO maestro 18 -46575487, -46575487 AB042647 18q21 Hs.30495 6

binding

nucleus

nucleolus

 
228044_at 0.904 5.006 9.490 8.777e-08 0.001 7.700 SERP2 stress-associated endoplasmic reticulum protein family member 2 13 43845977 AI420319 13q14.11 Hs.377972 4

endoplasmic reticulum

protein transport

membrane

integral to membrane

intracellular protein transmembrane transport

 
219765_at 2.571 4.909 9.278 1.180e-07 0.001 7.460 ZNF329 zinc finger protein 329 19 -63329506 NM_024620 19q13.43 Hs.458377 2

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
227558_at 1.311 6.002 9.278 1.180e-07 0.001 7.459 CBX4 chromobox homolog 4 (Pc class homolog, Drosophila) 17 -75421549 AI570531 17q25.3 Hs.714363 25

chromatin

chromatin binding

transcription corepressor activity

nucleus

chromatin assembly or disassembly

anti-apoptosis

negative regulation of transcription

chromatin modification

enzyme binding

modification-dependent protein catabolic process

 
1557260_a_at 1.802 2.670 8.944 1.900e-07 0.001 7.068 ZNF382 zinc finger protein 382 19 41788060 BM973530 19q13.12 Hs.631591 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
219073_s_at 2.007 4.964 8.644 2.946e-07 0.001 6.703 OSBPL10 oxysterol binding protein-like 10 3 -31677320 NM_017784 3p22.3 Hs.150122 7

lipid transport

steroid metabolic process

 
204044_at 1.433 5.567 8.554 3.367e-07 0.002 6.591 QPRT quinolinate phosphoribosyltransferase 16 29597941 NM_014298 16p11.2 Hs.513484 8

nicotinate-nucleotide diphosphorylase (carboxylating) activity

nicotinate-nucleotide diphosphorylase (carboxylating) activity

cellular_component

cytosol

metabolic process

NAD biosynthetic process

transferase activity, transferring glycosyl groups

pyridine nucleotide biosynthetic process

quinolinate catabolic process

protein homodimerization activity

protein oligomerization

Nicotinate and nicotinamide metabolism

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Metabolic pathways

222431_at 1.181 6.362 8.503 3.635e-07 0.002 6.527 SPIN1 spindlin 1 9 90193116 AL136719 9q22.1-q22.3 Hs.146804 16

nucleus

spindle

cell cycle

multicellular organismal development

gamete generation

 
204400_at 0.948 4.839 8.089 6.821e-07 0.002 5.994 EFS embryonal Fyn-associated substrate 14 -22895450 NM_005864 14q11.2-q12 Hs.24587 8

cytoplasm

cell adhesion

intracellular signaling cascade

SH3 domain binding

 
220183_s_at 1.112 6.738 8.022 7.563e-07 0.003 5.905 NUDT6 nudix (nucleoside diphosphate linked moiety X)-type motif 6 4 -124033248, -124033248 NM_007083 4q26 Hs.558459 15

cellular_component

growth factor activity

biological_process

hydrolase activity

 
201462_at 1.163 4.520 7.959 8.349e-07 0.003 5.821 SCRN1 secernin 1 7 -29926244, -29926244, -29926244 NM_014766 7p14.3-p14.1 Hs.520740 11

molecular_function

nucleus

cytoplasm

exocytosis

nuclear membrane

 
202203_s_at -1.560 7.181 -7.959 8.349e-07 0.003 5.821 AMFR autocrine motility factor receptor 16 -54952864 NM_001144 16q21 Hs.295137 33

protein polyubiquitination

integral to membrane of membrane fraction

ubiquitin-protein ligase activity

ubiquitin-protein ligase activity

receptor activity

receptor activity

protein binding

endoplasmic reticulum

ubiquitin-dependent protein catabolic process

cell motion

signal transduction

zinc ion binding

membrane

integral to membrane

integral to membrane

ligase activity

integral to endoplasmic reticulum membrane

ER-associated protein catabolic process

ER-associated protein catabolic process

endoplasmic reticulum unfolded protein response

metal ion binding

protein oligomerization

 
209005_at 0.774 7.759 7.910 9.008e-07 0.003 5.756 FBXL5 F-box and leucine-rich repeat protein 5 4 -15215251 AF157323 4p15.32 Hs.643433 13

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

protein ubiquitination

modification-dependent protein catabolic process

 
225817_at 0.877 4.119 7.836 1.012e-06 0.003 5.655 CGNL1 cingulin-like 1 15 55455996 AB051536 15q21.3 Hs.148989 6

motor activity

tight junction

myosin complex

cell junction

 
230919_at 1.223 3.345 7.800 1.072e-06 0.003 5.605 ZNF233 zinc finger protein 233 19 49455915 AW006620 19q13.31 Hs.466891 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
215307_at 0.852 3.799 7.516 1.687e-06 0.004 5.213 ZNF529 zinc finger protein 529 19 -41762996, -41726357, -41726357 AL109722 19q13.13 Hs.708146 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
229377_at -0.953 5.872 -7.498 1.739e-06 0.004 5.187 GRTP1 growth hormone regulated TBC protein 1 13 -113026505 BF001483 13q34 Hs.170904 3

GTPase activator activity

Rab GTPase activator activity

intracellular

regulation of Rab GTPase activity

 
230329_s_at 1.135 7.493 7.399 2.041e-06 0.005 5.047 NUDT6 nudix (nucleoside diphosphate linked moiety X)-type motif 6 4 -124033248, -124033248 AI580268 4q26 Hs.558459 15

cellular_component

growth factor activity

biological_process

hydrolase activity

 
203423_at 2.246 6.369 7.382 2.100e-06 0.005 5.022 RBP1 retinol binding protein 1, cellular 3 -140727937, -140727317, -140718965 NM_002899 3q23 Hs.529571 31

transporter activity

cytoplasm

transport

lipid binding

retinal binding

retinol binding

retinol metabolic process

retinoic acid metabolic process

 
229160_at -1.599 7.231 -7.299 2.407e-06 0.005 4.903 MUM1L1 melanoma associated antigen (mutated) 1-like 1 X 105307974 AI967987 Xq22.3 Hs.592221 5    
223192_at 0.682 8.030 7.283 2.470e-06 0.005 4.880 SLC25A28 solute carrier family 25, member 28 10 -101360264 AF267854 10q23-q24 Hs.403790 6

binding

iron ion binding

mitochondrion

mitochondrial inner membrane

ion transport

iron ion transport

membrane

integral to membrane

 
1558487_a_at 0.905 7.829 7.168 2.991e-06 0.006 4.712 TMED4 transmembrane emp24 protein transport domain containing 4 7 -44585286 AK074557 7p13 Hs.598832 Hs.715273 11

endoplasmic reticulum

transport

membrane

integral to membrane

 
218312_s_at 1.098 7.394 7.089 3.410e-06 0.006 4.597 ZSCAN18 zinc finger and SCAN domain containing 18 19 -63310783, -63287021, -63287021 NM_023926 19q13.43 Hs.235390 5

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
204309_at 0.699 4.458 7.084 3.438e-06 0.006 4.590 CYP11A1 cytochrome P450, family 11, subfamily A, polypeptide 1 15 -72417155, -72417155 NM_000781 15q23-q24 Hs.303980 88

monooxygenase activity

mitochondrion

lipid metabolic process

C21-steroid hormone biosynthetic process

cholesterol metabolic process

cholesterol metabolic process

cholesterol monooxygenase (side-chain-cleaving) activity

cholesterol monooxygenase (side-chain-cleaving) activity

electron carrier activity

membrane

heme binding

mitochondrial membrane

vitamin D metabolic process

metal ion binding

oxidation reduction

C21-Steroid hormone metabolism

Metabolic pathways

243924_at 1.395 3.740 6.919 4.540e-06 0.007 4.344 LOC100127980 hypothetical protein LOC100127980 19   AA781404 19q13.12 Hs.595153 1    
228332_s_at -0.532 9.953 -6.917 4.562e-06 0.007 4.340 C11orf31 chromosome 11 open reading frame 31 11 57265297 AA526939 11q12.1 Hs.655373 Hs.719147 6

selenium binding

cell redox homeostasis

 
204671_s_at 0.992 5.498 6.908 4.627e-06 0.007 4.327 ANKRD6 ankyrin repeat domain 6 6 90199615 BE677131 6q14.2-q16.1 Hs.702213 9

protein binding

 
200994_at -0.552 10.164 -6.848 5.127e-06 0.008 4.236 IPO7 importin 7 11 9362744 BG291787 11p15.4 Hs.718440 22

protein import into nucleus, docking

small GTPase regulator activity

transporter activity

soluble fraction

nucleus

nuclear pore

cytoplasm

intracellular protein transport

signal transduction

Ran GTPase binding

protein transporter activity

histone binding

interspecies interaction between organisms

 
224928_at -0.908 9.894 -6.750 6.063e-06 0.009 4.087 SETD7 SET domain containing (lysine methyltransferase) 7 4 -140646641 AK024846 4q28 Hs.480792 21

protein binding

nucleus

chromosome

regulation of transcription, DNA-dependent

methyltransferase activity

chromatin modification

transferase activity

histone-lysine N-methyltransferase activity

histone-lysine N-methyltransferase activity

Lysine degradation

236328_at 0.701 4.744 6.663 7.054e-06 0.010 3.952 ZNF285A zinc finger protein 285A 19 -49581647 AW513227   Hs.709428 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
223373_s_at 0.925 8.632 6.662 7.060e-06 0.010 3.951 PLA2G12A phospholipase A2, group XIIA 4 -110850594 AF306567 4q25 Hs.389452 10

calcium ion binding

extracellular region

intracellular

cytoplasm

endoplasmic reticulum

Golgi apparatus

phospholipid metabolic process

biological_process

lipid catabolic process

hydrolase activity

calcium-dependent phospholipase A2 activity

Glycerophospholipid metabolism

Ether lipid metabolism

Arachidonic acid metabolism

Linoleic acid metabolism

alpha-Linolenic acid metabolism

Metabolic pathways

MAPK signaling pathway

Vascular smooth muscle contraction

VEGF signaling pathway

Fc epsilon RI signaling pathway

Long-term depression

GnRH signaling pathway

227379_at 0.912 5.055 6.656 7.141e-06 0.010 3.941 MBOAT1 membrane bound O-acyltransferase domain containing 1 6 -20208913 AI734993 6p22.3 Hs.377830 7

acyltransferase activity

phospholipid biosynthetic process

membrane

integral to membrane

transferase activity

 
210445_at 0.571 4.524 6.607 7.773e-06 0.010 3.865 FABP6 fatty acid binding protein 6, ileal 5 159546951, 159558625, 159589014 U19869 5q33.3-q34 Hs.519719 18

transporter activity

fatty acid binding

cytoplasm

cytosol

lipid metabolic process

transport

steroid metabolic process

negative regulation of cell proliferation

PPAR signaling pathway

202646_s_at -0.712 11.463 -6.517 9.093e-06 0.011 3.725 CSDE1 cold shock domain containing E1, RNA-binding 1 -115061060, -115061060, -115061059 AA167775 1p22 Hs.69855 25

DNA binding

RNA binding

protein binding

cytoplasm

regulation of transcription, DNA-dependent

male gonad development

 
203178_at -2.178 8.782 -6.470 9.881e-06 0.012 3.651 GATM glycine amidinotransferase (L-arginine:glycine amidinotransferase) 15 -43440613 NM_001482 15q21.1 Hs.75335 23

cytoplasm

mitochondrion

mitochondrial inner membrane

mitochondrial intermembrane space

creatine biosynthetic process

response to oxidative stress

response to nutrient

embryonic development

response to organic substance

glycine amidinotransferase activity

membrane

transferase activity

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines

tissue regeneration

response to peptide hormone stimulus

response to mercury ion

Glycine, serine and threonine metabolism

Arginine and proline metabolism

Metabolic pathways

221432_s_at 0.709 7.402 6.383 1.151e-05 0.013 3.513 SLC25A28 solute carrier family 25, member 28 10 -101360264 NM_031212 10q23-q24 Hs.403790 6

binding

iron ion binding

mitochondrion

mitochondrial inner membrane

ion transport

iron ion transport

membrane

integral to membrane

 
200915_x_at -0.730 11.862 -6.382 1.155e-05 0.013 3.511 KTN1 kinectin 1 (kinesin receptor) 14 55116677, 55116677 NM_004986 14q22.1 Hs.509414 30

molecular_function

membrane fraction

endoplasmic reticulum

endoplasmic reticulum membrane

integral to plasma membrane

microtubule-based movement

membrane

 
224476_s_at 0.769 7.217 6.362 1.196e-05 0.014 3.479 MESP1 mesoderm posterior 1 homolog (mouse) 15 -88094103 BC006219 15q26.1 Hs.447531 4

heart morphogenesis

DNA binding

nucleus

Notch signaling pathway

multicellular organismal development

mesodermal cell migration

transcription regulator activity

regulation of transcription

 
214709_s_at -0.796 11.707 -6.312 1.305e-05 0.014 3.400 KTN1 kinectin 1 (kinesin receptor) 14 55116677, 55116677 Z22551 14q22.1 Hs.509414 30

molecular_function

membrane fraction

endoplasmic reticulum

endoplasmic reticulum membrane

integral to plasma membrane

microtubule-based movement

membrane

 
238049_at 0.748 3.958 6.304 1.326e-05 0.014 3.387 GRAMD3 GRAM domain containing 3 5 125723686, 125786767, 125828685 AW971198 5q23.2 Hs.363558 6    
223680_at 0.574 3.733 6.287 1.367e-05 0.014 3.359 ZNF607 zinc finger protein 607 19 -42879115 BC005085 19q13.1 Hs.116622 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
227542_at -1.040 7.379 -6.284 1.373e-05 0.014 3.355 SOCS6 suppressor of cytokine signaling 6 18 66107116 AU157543 18q22.2 Hs.44439 13

protein binding

cytoplasm

defense response

intracellular signaling cascade

JAK-STAT cascade

negative regulation of signal transduction

modification-dependent protein catabolic process

regulation of growth

 
219584_at 2.428 5.503 6.249 1.463e-05 0.014 3.298 PLA1A phospholipase A1 member A 3 120799411 NM_015900 3q13.13-q13.2 Hs.437451 11

extracellular region

phosphatidylserine metabolic process

phospholipase A1 activity

lipid catabolic process

hydrolase activity

Tropane, piperidine and pyridine alkaloid biosynthesis

238952_x_at 0.508 3.760 6.245 1.472e-05 0.014 3.292 ZNF829 zinc finger protein 829 19 -42074092 BF439163 19q13.12 Hs.124047 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1553177_at -2.066 6.108 -6.240 1.487e-05 0.014 3.283 SH2D1B SH2 domain containing 1B 1 -160631679 BC022407 1q23.3 Hs.350581 10

molecular_function

protein binding

cellular_component

biological_process

Natural killer cell mediated cytotoxicity

224580_at 0.691 4.144 6.227 1.522e-05 0.014 3.262 SLC38A1 solute carrier family 38, member 1 12 -44863107 BF515894 12q13.11 Hs.694701 11

sodium:amino acid symporter activity

membrane fraction

plasma membrane

ion transport

sodium ion transport

glutamine transport

L-glutamine transmembrane transporter activity

symporter activity

integral to membrane

axon

sodium ion binding

 
205374_at -0.591 13.454 -6.226 1.524e-05 0.014 3.261 SLN sarcolipin 11 -107083310 NM_003063 11q22-q23 Hs.334629 12

membrane

integral to membrane

sarcoplasmic reticulum

enzyme regulator activity

regulation of calcium ion transport

 
226676_at 0.750 4.388 6.219 1.541e-05 0.014 3.251 ZNF521 zinc finger protein 521 18 -20895885 AK021452 18q11.2 Hs.116935 9    
229012_at 0.711 5.291 6.191 1.623e-05 0.014 3.204 C9orf24 chromosome 9 open reading frame 24 9 -34369016, -34369016 AW269443 9p13.3 Hs.50334 8    
219449_s_at -1.560 10.923 -6.181 1.652e-05 0.014 3.188 TMEM70 transmembrane protein 70 8 75050983 NM_017866 8q21.11 Hs.106650 7

molecular_function

mitochondrion

membrane

integral to membrane

integral to mitochondrial membrane

mitochondrial proton-transporting ATP synthase complex assembly

 
238592_at -2.219 8.949 -6.171 1.682e-05 0.014 3.172 PDLIM3 PDZ and LIM domain 3 4 -186659844 BE840636 4q35 Hs.85862 12

nucleus

nucleolus

cytoplasm

actin filament organization

heart development

cytoskeletal protein binding

zinc ion binding

structural constituent of muscle

actin cytoskeleton

Z disc

metal ion binding

 
214643_x_at -0.779 9.148 -6.164 1.703e-05 0.014 3.161 BIN1 bridging integrator 1 2 -127522077, -127522076 BG034080 2q14 Hs.193163 69

protein binding

nucleus

cytoplasm

multicellular organismal development

cell proliferation

actin cytoskeleton

regulation of endocytosis

cell differentiation

interspecies interaction between organisms

 
202942_at 0.981 9.610 6.161 1.712e-05 0.014 3.156 ETFB electron-transfer-flavoprotein, beta polypeptide 19 -56540220, -56540220 NM_001985 19q13.3 Hs.348531 16

mitochondrion

mitochondrial matrix

transport

electron carrier activity

electron transport chain

 
242323_at 0.812 8.505 6.151 1.743e-05 0.014 3.140 PLA2G12A phospholipase A2, group XIIA 4 -110850594 AV714268 4q25 Hs.389452 10

calcium ion binding

extracellular region

intracellular

cytoplasm

endoplasmic reticulum

Golgi apparatus

phospholipid metabolic process

biological_process

lipid catabolic process

hydrolase activity

calcium-dependent phospholipase A2 activity

Glycerophospholipid metabolism

Ether lipid metabolism

Arachidonic acid metabolism

Linoleic acid metabolism

alpha-Linolenic acid metabolism

Metabolic pathways

MAPK signaling pathway

Vascular smooth muscle contraction

VEGF signaling pathway

Fc epsilon RI signaling pathway

Long-term depression

GnRH signaling pathway

219441_s_at 0.726 5.096 6.150 1.745e-05 0.014 3.139 LRRK1 leucine-rich repeat kinase 1 15 99276982 NM_024652 15q26.3 Hs.407918 16

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

GTP binding

intracellular

cytoplasm

protein amino acid phosphorylation

small GTPase mediated signal transduction

transferase activity

manganese ion binding

 
231871_at 0.665 4.686 6.127 1.820e-05 0.015 3.101 GPR180 G protein-coupled receptor 180 13 94052104 AU160685 13q32.1 Hs.657472 7

membrane

integral to membrane

 
201860_s_at 0.799 5.248 6.081 1.978e-05 0.015 3.025 PLAT plasminogen activator, tissue 8 -42151392 NM_000930 8p12 Hs.491582 209

serine-type endopeptidase activity

extracellular region

extracellular region

extracellular space

protein modification process

proteolysis

blood coagulation

peptidase activity

Complement and coagulation cascades

222975_s_at -0.801 10.872 -6.081 1.980e-05 0.015 3.024 CSDE1 cold shock domain containing E1, RNA-binding 1 -115061060, -115061060, -115061059 AI423180 1p22 Hs.69855 25

DNA binding

RNA binding

protein binding

cytoplasm

regulation of transcription, DNA-dependent

male gonad development

 
205311_at 0.946 4.213 6.080 1.982e-05 0.015 3.023 DDC dopa decarboxylase (aromatic L-amino acid decarboxylase) 7 -50493627, -50493627 NM_000790 7p12.2 Hs.359698 48

aromatic-L-amino-acid decarboxylase activity

protein binding

cellular amino acid and derivative metabolic process

response to toxin

lyase activity

carboxylic acid metabolic process

pyridoxal phosphate binding

catecholamine biosynthetic process

Histidine metabolism

Tyrosine metabolism

Phenylalanine metabolism

Tryptophan metabolism

Isoquinoline alkaloid biosynthesis

Betalain biosynthesis

Biosynthesis of alkaloids derived from shikimate pathway

Metabolic pathways

203466_at 0.568 6.450 6.079 1.986e-05 0.015 3.021 MPV17 MpV17 mitochondrial inner membrane protein 2 -27385863 NM_002437 2p23.3 Hs.75659 17

mitochondrial genome maintenance

molecular_function

mitochondrion

mitochondrial inner membrane

integral to peroxisomal membrane

oxygen and reactive oxygen species metabolic process

membrane

integral to membrane

homeostatic process

 
219926_at -0.790 10.266 -6.077 1.995e-05 0.015 3.018 POPDC3 popeye domain containing 3 6 -105712475, -105712475 NM_022361 6q21 Hs.458336 7

molecular_function

biological_process

membrane

integral to membrane

 
206891_at -3.638 9.865 -6.065 2.038e-05 0.015 2.998 ACTN3 actinin, alpha 3 11 66070966 NM_001104 11q13.1 Hs.654432 47

actin binding

integrin binding

calcium ion binding

protein binding

actin filament

focal adhesion

structural constituent of muscle

pseudopodium

protein homodimerization activity

regulation of apoptosis

focal adhesion formation

Focal adhesion

Adherens junction

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Systemic lupus erythematosus

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

219939_s_at -0.559 12.053 -6.048 2.101e-05 0.015 2.971 CSDE1 cold shock domain containing E1, RNA-binding 1 -115061060, -115061060, -115061059 NM_007158 1p22 Hs.69855 25

DNA binding

RNA binding

protein binding

cytoplasm

regulation of transcription, DNA-dependent

male gonad development

 
1558233_s_at -0.808 7.094 -6.038 2.138e-05 0.015 2.955 ATF1 activating transcription factor 1 12 49444085 CA337502 12q13 Hs.648565 45

transcription factor activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

sequence-specific DNA binding

protein dimerization activity

 
205730_s_at 1.146 6.986 6.032 2.161e-05 0.015 2.945 ABLIM3 actin binding LIM protein family, member 3 5 148501246 NM_014945 5q32 Hs.49688 15

actin binding

cytoplasm

cytoskeleton organization

zinc ion binding

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

Axon guidance

220565_at 1.016 4.568 6.023 2.198e-05 0.015 2.930 CCR10 chemokine (C-C motif) receptor 10 17 -38084945 NM_016602 17q21.1-q21.3 Hs.719562 20

receptor activity

G-protein coupled receptor activity

protein binding

plasma membrane

integral to plasma membrane

chemotaxis

signal transduction

G-protein coupled receptor protein signaling pathway

elevation of cytosolic calcium ion concentration

C-C chemokine receptor activity

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

215286_s_at -0.674 4.704 -6.007 2.262e-05 0.015 2.904 PHTF2 putative homeodomain transcription factor 2 7 77266044, 77266044, 77307382, 77307382 AL050389 7q11.23-q21 Hs.203965 Hs.601884 11

DNA binding

nucleus

endoplasmic reticulum

regulation of transcription

 
214356_s_at -0.605 9.260 -5.981 2.373e-05 0.016 2.860 KIAA0368 KIAA0368 9 -113162793 AI272899 9q31.3 Hs.368255 12

proteasome complex

binding

nucleus

early endosome

late endosome

endoplasmic reticulum

ER-Golgi intermediate compartment

trans-Golgi network

centrosome

cytosol

cytoplasmic membrane-bounded vesicle

ER to Golgi transport vesicle

ER-associated protein catabolic process

 
235082_at -0.907 4.866 -5.960 2.468e-05 0.016 2.825 PCNX pecanex homolog (Drosophila) 14 70443874 BG024649 14q24.2 Hs.446559 10

membrane

integral to membrane

 
228450_at 0.794 3.691 5.955 2.491e-05 0.016 2.816 PLEKHA7 pleckstrin homology domain containing, family A member 7 11 -16765787 AA758861 11p15.1 Hs.12332 4

protein binding

 
204607_at 3.820 7.980 5.906 2.726e-05 0.017 2.734 HMGCS2 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 (mitochondrial) 1 -120092525 NM_005518 1p13-p12 Hs.59889 13

hydroxymethylglutaryl-CoA synthase activity

hydroxymethylglutaryl-CoA synthase activity

mitochondrion

mitochondrial inner membrane

mitochondrial matrix

cholesterol biosynthetic process

response to nutrient

metabolic process

isoprenoid biosynthetic process

transferase activity

response to drug

response to peptide hormone stimulus

Synthesis and degradation of ketone bodies

Valine, leucine and isoleucine degradation

Butanoate metabolism

Terpenoid backbone biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

PPAR signaling pathway

220703_at 1.773 7.471 5.903 2.738e-05 0.017 2.730 C10orf110 chromosome 10 open reading frame 110 10 1058576 NM_018470 10p15.3 Hs.644603 2    
224870_at 0.952 9.168 5.890 2.802e-05 0.017 2.709 KIAA0114 KIAA0114 4 53273377 BG255416 4q12 Hs.17719 4    
201975_at -0.588 9.896 -5.885 2.830e-05 0.017 2.700 CLIP1 CAP-GLY domain containing linker protein 1 12 -121321933 NM_002956 12q24.3 Hs.524809 37

kinetochore

nucleic acid binding

protein binding

cytoplasm

endosome

microtubule

intermediate filament

mitosis

microtubule binding

zinc ion binding

protein homodimerization activity

metal ion binding

 
242794_at 0.828 3.715 5.876 2.880e-05 0.017 2.684 MAML3 mastermind-like 3 (Drosophila) 4 -140856995 AI569476 4q28 Hs.586165 7

transcription coactivator activity

nucleus

Notch signaling pathway

nuclear speck

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

Notch signaling pathway

230904_at -1.310 5.557 -5.872 2.897e-05 0.017 2.679 FSD1L fibronectin type III and SPRY domain containing 1-like 9 107250135, 107250135, 107250145 W42665 9q31 Hs.136901 4

molecular_function

cellular_component

biological_process

 
201030_x_at 1.779 10.837 5.870 2.908e-05 0.017 2.675 LDHB lactate dehydrogenase B 12 -21679542 NM_002300 12p12.2-p12.1 Hs.446149 27

L-lactate dehydrogenase activity

binding

cytoplasm

oxidoreductase activity

anaerobic glycolysis

cellular carbohydrate metabolic process

oxidation reduction

Glycolysis / Gluconeogenesis

Cysteine and methionine metabolism

Pyruvate metabolism

Propanoate metabolism

Metabolic pathways

231358_at 0.655 5.244 5.847 3.038e-05 0.017 2.636 MRO maestro 18 -46575487, -46575487 BE465760 18q21 Hs.30495 6

binding

nucleus

nucleolus

 
212307_s_at -0.630 7.187 -5.841 3.069e-05 0.017 2.626 OGT O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) X 70669657 BF001665 Xq13 Hs.405410 47

protein binding

nucleus

cytoplasm

cytosol

protein amino acid O-linked glycosylation

signal transduction

response to nutrient

acetylglucosaminyltransferase activity

transferase activity, transferring glycosyl groups

MLL5-L complex

O-Glycan biosynthesis

Metabolic pathways

200789_at 0.726 10.678 5.839 3.081e-05 0.017 2.623 ECH1 enoyl Coenzyme A hydratase 1, peroxisomal 19 -43997901 NM_001398 19q13.1 Hs.196176 9

enoyl-CoA hydratase activity

protein binding

mitochondrion

peroxisome

generation of precursor metabolites and energy

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

metabolic process

isomerase activity

Tyrosine metabolism

200972_at -0.915 10.380 -5.836 3.100e-05 0.017 2.617 TSPAN3 tetraspanin 3 15 -75125385 BC000704 15q24.3 Hs.5062 Hs.716484 8

membrane

integral to membrane

 
200995_at -0.960 8.955 -5.826 3.158e-05 0.017 2.600 IPO7 importin 7 11 9362744 AI741392 11p15.4 Hs.718440 22

protein import into nucleus, docking

small GTPase regulator activity

transporter activity

soluble fraction

nucleus

nuclear pore

cytoplasm

intracellular protein transport

signal transduction

Ran GTPase binding

protein transporter activity

histone binding

interspecies interaction between organisms

 
212552_at 0.618 6.716 5.817 3.209e-05 0.017 2.586 HPCAL1 hippocalcin-like 1 2 10360490, 10361276 BE617588 2p25.1 Hs.467696 Hs.580427 20

calcium ion binding

protein binding

 
218735_s_at 1.195 5.646 5.806 3.275e-05 0.017 2.567 ZNF544 zinc finger protein 544 19 63431881 AA349848 19q13.43 Hs.438994 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1555793_a_at 0.879 4.722 5.799 3.318e-05 0.017 2.555 ZFP82 zinc finger protein 82 homolog (mouse) 19 -41574700 AL834267 19q13.12 Hs.558734 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
214039_s_at -1.126 11.019 -5.793 3.355e-05 0.017 2.545 LAPTM4B lysosomal protein transmembrane 4 beta 8 98856984 T15777 8q22.1 Hs.492314 17

transport

endomembrane system

membrane

integral to membrane

Lysosome

201904_s_at 1.193 6.793 5.791 3.367e-05 0.017 2.542 CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like 3 37878672 BF031714 3p21.3 Hs.475963 18

molecular_function

phosphoprotein phosphatase activity

cellular_component

nucleus

biological_process

hydrolase activity

 
217975_at 0.831 7.011 5.790 3.371e-05 0.017 2.541 WBP5 WW domain binding protein 5 X 102498035 NM_016303 Xq22.2 Hs.533287 6

protein binding

WW domain binding

 
202204_s_at -0.669 7.366 -5.790 3.374e-05 0.017 2.540 AMFR autocrine motility factor receptor 16 -54952864 AF124145 16q21 Hs.295137 33

protein polyubiquitination

integral to membrane of membrane fraction

ubiquitin-protein ligase activity

ubiquitin-protein ligase activity

receptor activity

receptor activity

protein binding

endoplasmic reticulum

ubiquitin-dependent protein catabolic process

cell motion

signal transduction

zinc ion binding

membrane

integral to membrane

integral to membrane

ligase activity

integral to endoplasmic reticulum membrane

ER-associated protein catabolic process

ER-associated protein catabolic process

endoplasmic reticulum unfolded protein response

metal ion binding

protein oligomerization

 
221931_s_at -0.773 8.078 -5.789 3.382e-05 0.017 2.538 SEH1L SEH1-like (S. cerevisiae) 18 12937982 AV701173 18p11.21 Hs.301048 9

kinetochore

nucleus

nuclear pore organization

mitotic metaphase plate congression

protein transport

Nup107-160 complex

Nup107-160 complex

mRNA transport

attachment of spindle microtubules to kinetochore during mitosis

intracellular protein transmembrane transport

 
201132_at -0.736 8.987 -5.773 3.481e-05 0.017 2.512 HNRNPH2 heterogeneous nuclear ribonucleoprotein H2 (H') X 100549846 NM_019597 Xq22 Hs.632828 17

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

nucleoplasm

nucleolus

cytoplasm

cytoskeleton

heterogeneous nuclear ribonucleoprotein complex

 
227198_at 2.770 4.681 5.772 3.490e-05 0.017 2.509 AFF3 AF4/FMR2 family, member 3 2 -99530147, -99530147 AW085505 2q11.2-q12 Hs.444414 16

DNA binding

nucleus

multicellular organismal development

regulation of transcription

 
219109_at 0.978 6.414 5.760 3.567e-05 0.017 2.489 SPAG16 sperm associated antigen 16 2 213857360, 213857360 NM_024532 2q34 Hs.602792 Hs.715620 6

cytoplasm

cilium

flagellum

cell projection organization

 
225719_s_at 0.500 7.148 5.751 3.627e-05 0.017 2.474 MRPL55 mitochondrial ribosomal protein L55 1 -226361002 BG497783 1q42.13 Hs.63236 11

structural constituent of ribosome

mitochondrion

mitochondrial large ribosomal subunit

ribosome

translation

 
60471_at 0.598 5.612 5.747 3.653e-05 0.017 2.468 RIN3 Ras and Rab interactor 3 14 92049877 AA625133 14q32.12 Hs.326822 8

GTPase activator activity

protein binding

cellular_component

cytoplasm

early endosome

endocytosis

signal transduction

Ras GTPase binding

cytoplasmic vesicle

 
200993_at -0.615 10.084 -5.740 3.703e-05 0.017 2.455 IPO7 importin 7 11 9362744 AA939270 11p15.4 Hs.718440 22

protein import into nucleus, docking

small GTPase regulator activity

transporter activity

soluble fraction

nucleus

nuclear pore

cytoplasm

intracellular protein transport

signal transduction

Ran GTPase binding

protein transporter activity

histone binding

interspecies interaction between organisms

 
212586_at -0.867 9.942 -5.737 3.725e-05 0.017 2.450 CAST calpastatin 5 96023696, 96064251, 96104999 AA195244 5q15 Hs.436186 60

protein binding

calcium-dependent cysteine-type endopeptidase inhibitor activity

 
213166_x_at 0.894 8.455 5.733 3.748e-05 0.017 2.444 FAM128A family with sequence similarity 128, member A 2 -131958002 BG332462 2q21.1 Hs.655067 2    
213844_at 0.660 6.527 5.724 3.812e-05 0.017 2.429 HOXA5 homeobox A5 7 -27147520 NM_019102 7p15-p14 Hs.655218 32

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

pattern specification process

anterior/posterior pattern formation

lung development

thyroid gland development

multicellular organism growth

sequence-specific DNA binding

embryonic skeletal system morphogenesis

 
228084_at 0.820 7.162 5.720 3.843e-05 0.017 2.421 PLA2G12A phospholipase A2, group XIIA 4 -110850594 AI767751 4q25 Hs.389452 10

calcium ion binding

extracellular region

intracellular

cytoplasm

endoplasmic reticulum

Golgi apparatus

phospholipid metabolic process

biological_process

lipid catabolic process

hydrolase activity

calcium-dependent phospholipase A2 activity

Glycerophospholipid metabolism

Ether lipid metabolism

Arachidonic acid metabolism

Linoleic acid metabolism

alpha-Linolenic acid metabolism

Metabolic pathways

MAPK signaling pathway

Vascular smooth muscle contraction

VEGF signaling pathway

Fc epsilon RI signaling pathway

Long-term depression

GnRH signaling pathway

1569076_a_at 0.629 3.324 5.711 3.910e-05 0.017 2.406 ZNF836 zinc finger protein 836 19 -57349936 BE791720 19q13.41 Hs.631584 1

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
218128_at -1.000 5.937 -5.689 4.072e-05 0.017 2.368 NFYB nuclear transcription factor Y, beta 12 -103034987 AU151875 12q22-q23 Hs.84928 38

transcription factor activity

protein binding

intracellular

nucleus

CCAAT-binding factor complex

sequence-specific DNA binding

positive regulation of transcription, DNA-dependent

Antigen processing and presentation

240744_at 0.846 5.173 5.688 4.081e-05 0.017 2.366 CPA5 carboxypeptidase A5 7 129771865, 129771865 AW184014 7q32 Hs.567642 9

metallocarboxypeptidase activity

extracellular region

proteolysis

peptidase activity

metallopeptidase activity

zinc ion binding

metal ion binding

 
224931_at -0.601 7.334 -5.683 4.119e-05 0.017 2.358 SLC41A3 solute carrier family 41, member 3 3 -127207889, -127207889 AK021925 3q21.2-q21.3 Hs.573007 5

plasma membrane

cation transport

cation transmembrane transporter activity

integral to membrane

 
216733_s_at -2.181 8.037 -5.681 4.130e-05 0.017 2.356 GATM glycine amidinotransferase (L-arginine:glycine amidinotransferase) 15 -43440613 X86401 15q21.1 Hs.75335 23

cytoplasm

mitochondrion

mitochondrial inner membrane

mitochondrial intermembrane space

creatine biosynthetic process

response to oxidative stress

response to nutrient

embryonic development

response to organic substance

glycine amidinotransferase activity

membrane

transferase activity

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines

tissue regeneration

response to peptide hormone stimulus

response to mercury ion

Glycine, serine and threonine metabolism

Arginine and proline metabolism

Metabolic pathways

239084_at -0.591 4.907 -5.680 4.138e-05 0.017 2.354 SNAP29 synaptosomal-associated protein, 29kDa 22 19543291 BE896490 22q11.21 Hs.108002 Hs.701035 19

SNAP receptor activity

cytoplasm

plasma membrane

exocytosis

vesicle targeting

membrane fusion

protein transport

synaptosome

cell junction

synapse

SNARE interactions in vesicular transport

1570025_at -0.804 5.639 -5.664 4.262e-05 0.018 2.327 TACC2 transforming, acidic coiled-coil containing protein 2 10 123738678, 123913094 BC010219 10q26 Hs.501252 Hs.713875 18

protein binding

nucleus

cytoplasm

centrosome

nuclear hormone receptor binding

 
220235_s_at -1.156 6.973 -5.658 4.312e-05 0.018 2.316 C1orf103 chromosome 1 open reading frame 103 1 -111291334 NM_018372 1p13.3 Hs.25245 7

protein binding

 
213564_x_at 1.635 11.752 5.651 4.371e-05 0.018 2.304 LDHB lactate dehydrogenase B 12 -21679542 BE042354 12p12.2-p12.1 Hs.446149 27

L-lactate dehydrogenase activity

binding

cytoplasm

oxidoreductase activity

anaerobic glycolysis

cellular carbohydrate metabolic process

oxidation reduction

Glycolysis / Gluconeogenesis

Cysteine and methionine metabolism

Pyruvate metabolism

Propanoate metabolism

Metabolic pathways

239035_at 0.475 6.290 5.638 4.478e-05 0.018 2.282 MTHFR 5,10-methylenetetrahydrofolate reductase (NADPH) 1 -11768373 AL138431 1p36.3 Hs.214142 1776

methylenetetrahydrofolate reductase (NADPH) activity

methylenetetrahydrofolate reductase (NADPH) activity

protein binding

cytosol

cellular amino acid metabolic process

methionine metabolic process

blood circulation

oxidoreductase activity

oxidation reduction

One carbon pool by folate

Methane metabolism

Metabolic pathways

230405_at 0.507 7.327 5.638 4.480e-05 0.018 2.281 C5orf56 chromosome 5 open reading frame 56 5 131774571 AI143416 5q31.1 Hs.658288 1    
229178_at 0.605 4.428 5.636 4.497e-05 0.018 2.278 PRTG protogenin homolog (Gallus gallus) 15 -53691041 AV699825 15q21.3 Hs.130957 4

multicellular organismal development

membrane

integral to membrane

 
224435_at 0.846 8.214 5.611 4.708e-05 0.019 2.236 C10orf58 chromosome 10 open reading frame 58 10 82158221, 82163570 BC005871 10q23.1 Hs.500333 Hs.718589 10

extracellular region

 
224819_at 0.706 6.667 5.605 4.762e-05 0.019 2.225 TCEAL8 transcription elongation factor A (SII)-like 8 X -102394578 AI743979 Xq22.1 Hs.389734 4

nucleus

regulation of transcription

 
219629_at 0.690 5.097 5.589 4.907e-05 0.019 2.198 FAM118A family with sequence similarity 118, member A 22 44083744, 44084448 NM_017911 22q13 Hs.265018 6

membrane

integral to membrane

 
242056_at 0.674 7.261 5.585 4.950e-05 0.019 2.190 TRIM45 tripartite motif-containing 45 1 -117455199 AI793200 1p13.1 Hs.301526 8

protein binding

intracellular

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
227337_at -1.272 7.241 -5.581 4.981e-05 0.019 2.184 ANKRD37 ankyrin repeat domain 37 4 186554833 AA886870 4q35.1 Hs.508154 4

nucleus

cytoplasm

 
204999_s_at 2.290 5.575 5.577 5.019e-05 0.019 2.177 ATF5 activating transcription factor 5 19 55123785 BC005174 19q13.3 Hs.9754 25

transcription factor activity

RNA polymerase II transcription factor activity

transcription corepressor activity

nucleus

transcription factor complex

cytoplasm

regulation of transcription from RNA polymerase II promoter

anti-apoptosis

sequence-specific DNA binding

protein dimerization activity

 
209780_at -1.770 9.763 -5.576 5.031e-05 0.019 2.175 PHTF2 putative homeodomain transcription factor 2 7 77266044, 77266044, 77307382, 77307382 AL136883 7q11.23-q21 Hs.203965 Hs.601884 11

DNA binding

nucleus

endoplasmic reticulum

regulation of transcription

 
207076_s_at 1.812 7.831 5.576 5.034e-05 0.019 2.175 ASS1 argininosuccinate synthetase 1 9 132309914 NM_000050 9q34.1 Hs.160786 40

urea cycle

nucleotide binding

argininosuccinate synthase activity

protein binding

ATP binding

cytoplasm

arginine biosynthetic process

cellular amino acid biosynthetic process

ligase activity

Alanine, aspartate and glutamate metabolism

Arginine and proline metabolism

Metabolic pathways

206996_x_at -0.511 9.524 -5.573 5.058e-05 0.019 2.170 CACNB1 calcium channel, voltage-dependent, beta 1 subunit 17 -34586914, -34583234 NM_000723 17q21-q22 Hs.635 18

voltage-gated ion channel activity

voltage-gated calcium channel activity

calcium ion binding

plasma membrane

voltage-gated calcium channel complex

ion transport

calcium ion transport

MAPK signaling pathway

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

212427_at -1.179 7.057 -5.567 5.119e-05 0.019 2.159 KIAA0368 KIAA0368 9 -113162793 AB002366 9q31.3 Hs.368255 12

proteasome complex

binding

nucleus

early endosome

late endosome

endoplasmic reticulum

ER-Golgi intermediate compartment

trans-Golgi network

centrosome

cytosol

cytoplasmic membrane-bounded vesicle

ER to Golgi transport vesicle

ER-associated protein catabolic process

 
229770_at 0.828 6.353 5.536 5.421e-05 0.020 2.107 GLT1D1 glycosyltransferase 1 domain containing 1 12 127904033 AI041543 12q24.33 Hs.655668 6

extracellular region

biosynthetic process

transferase activity, transferring glycosyl groups

 
204186_s_at -0.930 7.957 -5.533 5.460e-05 0.020 2.100 PPID peptidylprolyl isomerase D 4 -159849728 AI014573 4q31.3 Hs.581725 25

peptidyl-prolyl cis-trans isomerase activity

cytoplasm

protein folding

cyclosporin A binding

isomerase activity

heat shock protein binding

Calcium signaling pathway

Parkinson's disease

Huntington's disease

224352_s_at -0.771 11.148 -5.526 5.530e-05 0.020 2.088 CFL2 cofilin 2 (muscle) 14 -34249338, -34249338, -34249338 AF134802 14q12 Hs.180141 20

actin binding

protein binding

intracellular

nucleus

cytoplasm

cytoskeleton

nuclear matrix

Axon guidance

Fc gamma R-mediated phagocytosis

Regulation of actin cytoskeleton

212551_at -0.722 11.501 -5.513 5.661e-05 0.020 2.067 CAP2 CAP, adenylate cyclase-associated protein, 2 (yeast) 6 17501714 NM_006366 6p22.3 Hs.132902 7

actin binding

binding

plasma membrane

cytoskeleton organization

establishment or maintenance of cell polarity

signal transduction

activation of adenylate cyclase activity

 
218729_at 0.938 6.757 5.489 5.931e-05 0.021 2.024 LXN latexin 3 -159866896 NM_020169 3q25.32 Hs.478067 5

enzyme inhibitor activity

protein binding

cytoplasm

metalloendopeptidase inhibitor activity

detection of temperature stimulus involved in sensory perception of pain

 
237515_at -2.052 6.341 -5.465 6.207e-05 0.022 1.983 TMEM56 transmembrane protein 56 1 95355481 AA054642 1p21.3 Hs.483512 3

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
204998_s_at 2.300 6.902 5.461 6.253e-05 0.022 1.976 ATF5 activating transcription factor 5 19 55123785 NM_012068 19q13.3 Hs.9754 25

transcription factor activity

RNA polymerase II transcription factor activity

transcription corepressor activity

nucleus

transcription factor complex

cytoplasm

regulation of transcription from RNA polymerase II promoter

anti-apoptosis

sequence-specific DNA binding

protein dimerization activity

 
214788_x_at -1.824 7.439 -5.460 6.265e-05 0.022 1.974 DDN dendrin 12 -47675199 AA731713 12q13.12 Hs.591044 5

nucleus

cytoplasm

endoplasmic reticulum

plasma membrane

dendrite

cell projection

perikaryon

 
235721_at 0.460 6.811 5.459 6.271e-05 0.022 1.973 DTX3 deltex homolog 3 (Drosophila) 12 56284870 N62126 12q13.3 Hs.32374 6

protein binding

cytoplasm

Notch signaling pathway

zinc ion binding

metal ion binding

Notch signaling pathway

201591_s_at 0.499 7.508 5.457 6.304e-05 0.022 1.968 NISCH nischarin 3 52464563 NM_007184 3p21.1 Hs.435290 16

receptor activity

integrin binding

protein binding

membrane fraction

cytoplasm

early endosome

cytosol

plasma membrane

glucose metabolic process

apoptosis

cell communication

regulation of blood pressure

amine receptor activity

Rac protein signal transduction

actin cytoskeleton organization

negative regulation of cell migration

regulation of synaptic transmission, GABAergic

phosphoinositide binding

norepinephrine secretion

recycling endosome

 
206847_s_at 0.998 7.004 5.441 6.492e-05 0.022 1.942 HOXA7 homeobox A7 7 -27159862 AF026397 7p15-p14 Hs.660918 24

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anterior/posterior pattern formation

transcription repressor activity

sequence-specific DNA binding

negative regulation of keratinocyte differentiation

positive regulation of transcription from RNA polymerase II promoter

embryonic skeletal system morphogenesis

 
226748_at -1.206 8.208 -5.438 6.534e-05 0.022 1.936 LYSMD2 LysM, putative peptidoglycan-binding, domain containing 2 15 -49802553, -49802553 AI674731 15q21.2 Hs.631693 3

cell wall macromolecule catabolic process

 
218164_at 0.747 7.072 5.425 6.695e-05 0.023 1.913 SPATA20 spermatogenesis associated 20 17 45979560 NM_022827 17q21.33 Hs.103147 7

catalytic activity

protein binding

multicellular organismal development

spermatogenesis

cell differentiation

 
212554_at -0.596 11.653 -5.414 6.833e-05 0.023 1.894 CAP2 CAP, adenylate cyclase-associated protein, 2 (yeast) 6 17501714 N90755 6p22.3 Hs.132902 7

actin binding

binding

plasma membrane

cytoskeleton organization

establishment or maintenance of cell polarity

signal transduction

activation of adenylate cyclase activity

 
227865_at 0.629 5.673 5.407 6.922e-05 0.023 1.883 C9orf103 chromosome 9 open reading frame 103 9 85427785 BF111242 9q21-q22 Hs.530261 1

nucleotide binding

molecular_function

shikimate kinase activity

ATP binding

cellular_component

carbohydrate metabolic process

biological_process

transferase activity

gluconokinase activity

 
209439_s_at 0.616 6.957 5.407 6.927e-05 0.023 1.882 PHKA2 phosphorylase kinase, alpha 2 (liver) X -18820336 D38616 Xp22.2-p22.1 Hs.54941 Hs.607628 Hs.622882 29

catalytic activity

phosphorylase kinase activity

calmodulin binding

plasma membrane

phosphorylase kinase complex

carbohydrate metabolic process

glycogen metabolic process

generation of precursor metabolites and energy

protein modification process

Calcium signaling pathway

Insulin signaling pathway

229809_at -0.720 5.722 -5.406 6.941e-05 0.023 1.880 POU6F1 POU class 6 homeobox 1 12 -49866986, -49866986 AW445212 12q13.13 Hs.555886 10

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

brain development

heart development

muscle organ development

sequence-specific DNA binding

 
218676_s_at -0.611 6.714 -5.390 7.153e-05 0.023 1.852 PCTP phosphatidylcholine transfer protein 17 51183354 NM_021213 17q21-q24 Hs.285218 9

cytoplasm

cytosol

cytosol

lipid binding

phosphatidylcholine transmembrane transporter activity

phosphatidylcholine transmembrane transporter activity

phospholipid transport

phosphatidylcholine binding

 
228376_at 0.808 5.826 5.389 7.170e-05 0.023 1.850 GGTA1 glycoprotein, alpha-galactosyltransferase 1 9 -123257139 AI972498 9q33.2-q34.11 Hs.97469 6

Golgi apparatus

carbohydrate metabolic process

membrane

integral to membrane

transferase activity, transferring hexosyl groups

 
235635_at -0.639 5.358 -5.388 7.176e-05 0.023 1.849 ARHGAP5 Rho GTPase activating protein 5 14 31616245 N50119 14q12 Hs.592313 19

GTPase activity

GTPase activator activity

Rho GTPase activator activity

GTP binding

intracellular

cytoplasm

cell adhesion

signal transduction

small GTPase mediated signal transduction

Rho protein signal transduction

membrane

SH2 domain binding

Focal adhesion

Leukocyte transendothelial migration

218843_at 0.966 6.142 5.387 7.194e-05 0.023 1.847 FNDC4 fibronectin type III domain containing 4 2 -27568254 NM_022823 2p23.3 Hs.27836 Hs.718524 6

membrane

integral to membrane

 
204784_s_at -1.891 8.892 -5.375 7.361e-05 0.023 1.826 MLF1 myeloid leukemia factor 1 3 159771646 NM_022443 3q25.1 Hs.85195 14

myeloid progenitor cell differentiation

DNA binding

nucleus

cytoplasm

transcription

cell cycle

cell cycle arrest

multicellular organismal development

protein domain specific binding

cell differentiation

 
208029_s_at -1.353 8.976 -5.372 7.401e-05 0.023 1.821 LAPTM4B lysosomal protein transmembrane 4 beta 8 98856984 NM_018407 8q22.1 Hs.492314 17

transport

endomembrane system

membrane

integral to membrane

Lysosome

224444_s_at 0.907 5.346 5.369 7.452e-05 0.023 1.815 C1orf97 chromosome 1 open reading frame 97 1 209622719 BC005997 1q32.3 Hs.523932 4    
242915_at 1.275 3.739 5.365 7.508e-05 0.023 1.808 ZNF682 zinc finger protein 682 19 -19976226, -19976226 AA603590 19p12 Hs.306298 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
213599_at -1.198 6.367 -5.361 7.567e-05 0.023 1.801 OIP5 Opa interacting protein 5 15 -39388757 BE045993 15q15.1 Hs.661645 6

chromosome, centromeric region

chromatin

protein binding

cellular_component

nucleus

cell cycle

mitosis

cell communication

chromocenter

Cajal body

cell division

 
201832_s_at -0.685 9.929 -5.346 7.776e-05 0.024 1.776 USO1 USO1 homolog, vesicle docking protein (yeast) 4 76868852 NM_003715 4q21.1 Hs.292689 34

Golgi membrane

protein binding

cytoplasm

microsome

Golgi apparatus

cytosol

intracellular protein transport

protein transporter activity

membrane

vesicle-mediated transport

vesicle fusion with Golgi apparatus

perinuclear region of cytoplasm

 
226083_at -1.394 7.027 -5.339 7.885e-05 0.024 1.763 TMEM70 transmembrane protein 70 8 75050983 AA886902 8q21.11 Hs.106650 7

molecular_function

mitochondrion

membrane

integral to membrane

integral to mitochondrial membrane

mitochondrial proton-transporting ATP synthase complex assembly

 
210202_s_at -0.889 10.258 -5.333 7.971e-05 0.024 1.753 BIN1 bridging integrator 1 2 -127522077, -127522076 U87558 2q14 Hs.193163 69

protein binding

nucleus

cytoplasm

multicellular organismal development

cell proliferation

actin cytoskeleton

regulation of endocytosis

cell differentiation

interspecies interaction between organisms

 
205437_at 0.832 5.822 5.320 8.178e-05 0.024 1.729 ZNF211 zinc finger protein 211 19 62836346 NM_006385 19q13.4 Hs.590977 4

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
222742_s_at 0.577 8.412 5.316 8.240e-05 0.024 1.722 RABL5 RAB, member RAS oncogene family-like 5 7 -100743368 AW026449 7q22.1 Hs.389104 4

nucleotide binding

GTP binding

 
205951_at -2.946 11.141 -5.314 8.267e-05 0.024 1.719 MYH1 myosin, heavy chain 1, skeletal muscle, adult 17 -10336348 NM_005963 17p13.1 Hs.689619 30

nucleotide binding

motor activity

actin binding

calmodulin binding

ATP binding

nucleolus

cytoplasm

striated muscle thick filament

focal adhesion

striated muscle contraction

myosin complex

myofibril

A band

Tight junction

232986_at 0.583 3.869 5.314 8.276e-05 0.024 1.718 ZNF233 zinc finger protein 233 19 49455915 AC074331 19q13.31 Hs.466891 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
210201_x_at -0.710 10.934 -5.311 8.324e-05 0.024 1.713 BIN1 bridging integrator 1 2 -127522077, -127522076 AF001383 2q14 Hs.193163 69

protein binding

nucleus

cytoplasm

multicellular organismal development

cell proliferation

actin cytoskeleton

regulation of endocytosis

cell differentiation

interspecies interaction between organisms

 
203264_s_at 0.654 5.026 5.310 8.329e-05 0.024 1.713 ARHGEF9 Cdc42 guanine nucleotide exchange factor (GEF) 9 X -62771572 NM_015185 Xq11.1 Hs.54697 10

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

intracellular

cytoplasm

regulation of Rho protein signal transduction

 
201297_s_at -0.901 5.545 -5.305 8.409e-05 0.024 1.704 MOBKL1B MOB1, Mps One Binder kinase activator-like 1B (yeast) 2 -74236718 AK023321 2p13.1 Hs.196437 12

protein binding

zinc ion binding

metal ion binding

 
214439_x_at -0.702 10.906 -5.304 8.437e-05 0.024 1.701 BIN1 bridging integrator 1 2 -127522077, -127522076 AF043899 2q14 Hs.193163 69

protein binding

nucleus

cytoplasm

multicellular organismal development

cell proliferation

actin cytoskeleton

regulation of endocytosis

cell differentiation

interspecies interaction between organisms

 
1553971_a_at -1.303 6.969 -5.297 8.546e-05 0.024 1.689 GATS GATS, stromal antigen 3 opposite strand 7 -99644496, -99636215 AL831967 7q22.1 Hs.556063 Hs.718406 4    
235301_at 0.792 5.912 5.292 8.637e-05 0.024 1.679 KIAA1324L KIAA1324-like 7 -86347173, -86347173 AI797353 7q21.12 Hs.208093 3

G-protein coupled receptor activity

protein binding

G-protein coupled receptor protein signaling pathway

membrane

integral to membrane

 
209605_at 0.912 8.090 5.283 8.788e-05 0.024 1.663 TST thiosulfate sulfurtransferase (rhodanese) 22 -35736851 D87292 22q13.1 Hs.474783 25

thiosulfate sulfurtransferase activity

mitochondrion

mitochondrial matrix

plasma membrane

sulfate transport

cyanate catabolic process

transferase activity

 
228863_at 0.838 4.329 5.275 8.921e-05 0.024 1.649 PCDH17 protocadherin 17 13 57103789 N69091 13q21.1 Hs.106511 11

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

 
206030_at 0.815 8.060 5.273 8.945e-05 0.024 1.647 ASPA aspartoacylase (Canavan disease) 17 3324153, 3326045 NM_000049 17pter-p13 Hs.171142 27

aminoacylase activity

nucleus

cytoplasm

aspartate catabolic process

metabolic process

zinc ion binding

hydrolase activity, acting on ester bonds

aspartoacylase activity

metal ion binding

Alanine, aspartate and glutamate metabolism

Histidine metabolism

232124_at 0.575 3.430 5.272 8.969e-05 0.024 1.644 LOC729085 hypothetical protein LOC729085 3 42995762 AL117530 3p22.1 Hs.146346 2    
208754_s_at -0.852 7.540 -5.263 9.127e-05 0.024 1.628 NAP1L1 nucleosome assembly protein 1-like 1 12 -74724938 AL162068 12q21.2 Hs.524599 Hs.695185 17

protein binding

nucleus

chromatin assembly complex

DNA replication

nucleosome assembly

positive regulation of cell proliferation

melanosome

 
203570_at 1.169 4.863 5.250 9.351e-05 0.025 1.606 LOXL1 lysyl oxidase-like 1 15 72005841 NM_005576 15q22 15q24-q25 Hs.65436 48

copper ion binding

protein binding

extracellular region

proteinaceous extracellular matrix

extracellular space

oxidoreductase activity

oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor

protein amino acid deamination

metal ion binding

oxidation reduction

 
225010_at -0.648 7.666 -5.246 9.427e-05 0.025 1.599 CCDC6 coiled-coil domain containing 6 10 -61218526 AK024913 10q21 Hs.591360 20

structural constituent of cytoskeleton

protein binding

cellular_component

cytoplasm

cytoskeleton

biological_process

SH3 domain binding

Pathways in cancer

Thyroid cancer

214890_s_at 1.480 5.468 5.236 9.602e-05 0.025 1.582 FAM149A family with sequence similarity 149, member A 4 187302988, 187307320 AL080065 4q35.1 Hs.357025 3    
224477_s_at 0.525 6.507 5.231 9.703e-05 0.025 1.572 NUDT16L1 nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1 16 4683716 BC006223 16p13.3 Hs.592084 5

cytoplasm

 
201397_at 0.434 6.069 5.221 9.888e-05 0.025 1.555 PHGDH phosphoglycerate dehydrogenase 1 120055941 NM_006623 1p12 Hs.487296 18

phosphoglycerate dehydrogenase activity

L-serine biosynthetic process

brain development

cellular amino acid biosynthetic process

electron carrier activity

oxidoreductase activity

cofactor binding

NAD or NADH binding

oxidation reduction

Glycine, serine and threonine metabolism

Metabolic pathways

205589_at 0.632 12.188 5.220 9.907e-05 0.025 1.553 MYL3 myosin, light chain 3, alkali; ventricular, skeletal, slow 3 -46874360 NM_000258 3p21.3-p21.2 Hs.517939 27

regulation of the force of heart contraction

motor activity

actin monomer binding

calcium ion binding

muscle myosin complex

regulation of striated muscle contraction

structural constituent of muscle

myosin complex

A band

I band

myosin II heavy chain binding

positive regulation of ATPase activity

ventricular cardiac muscle morphogenesis

cardiac muscle contraction

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

210967_x_at -0.479 9.549 -5.220 9.919e-05 0.025 1.552 CACNB1 calcium channel, voltage-dependent, beta 1 subunit 17 -34586914, -34583234 M92301 17q21-q22 Hs.635 18

voltage-gated ion channel activity

voltage-gated calcium channel activity

calcium ion binding

plasma membrane

voltage-gated calcium channel complex

ion transport

calcium ion transport

MAPK signaling pathway

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

206869_at 0.511 5.324 5.212 1.006e-04 0.026 1.538 CHAD chondroadherin 17 -45896851 NM_001267 17q21.33 Hs.97220 6

regulation of cell growth

extracellular matrix structural constituent

protein binding

extracellular region

proteinaceous extracellular matrix

Focal adhesion

ECM-receptor interaction

210807_s_at 0.798 4.907 5.210 1.010e-04 0.026 1.535 SLC16A7 solute carrier family 16, member 7 (monocarboxylic acid transporter 2) 12 58369392 AF049608 12q13 Hs.439643 8

pyruvate secondary active transmembrane transporter activity

membrane fraction

plasma membrane

integral to plasma membrane

transport

pyruvate transport

symporter activity

secondary active monocarboxylate transmembrane transporter activity

organic anion transport

 
204783_at -2.201 7.532 -5.205 1.021e-04 0.026 1.525 MLF1 myeloid leukemia factor 1 3 159771646 AI911434 3q25.1 Hs.85195 14

myeloid progenitor cell differentiation

DNA binding

nucleus

cytoplasm

transcription

cell cycle

cell cycle arrest

multicellular organismal development

protein domain specific binding

cell differentiation

 
208767_s_at -1.787 9.437 -5.200 1.031e-04 0.026 1.516 LAPTM4B lysosomal protein transmembrane 4 beta 8 98856984 AW149681 8q22.1 Hs.492314 17

transport

endomembrane system

membrane

integral to membrane

Lysosome

224906_at -0.668 8.706 -5.198 1.034e-04 0.026 1.514 ANO6 anoctamin 6 12 43896036, 43896036, 43896142, 43972732 AL041280 12q12 Hs.696326 6

ion channel activity

chloride channel activity

calcium ion binding

ion transport

membrane

integral to membrane

chloride ion binding

chloride channel complex

 
212689_s_at -1.040 6.775 -5.195 1.040e-04 0.026 1.509 KDM3A lysine (K)-specific demethylase 3A 2 86521781, 86522094 AA524505 2p11.2 Hs.557425 11

iron ion binding

nucleus

cytoplasm

spermatogenesis

zinc ion binding

hormone-mediated signaling

oxidoreductase activity

chromatin modification

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

cell differentiation

androgen receptor signaling pathway

histone H3-K9 demethylation

positive regulation of transcription

formaldehyde biosynthetic process

metal ion binding

androgen receptor binding

oxidation reduction

 
217781_s_at -0.805 11.287 -5.194 1.042e-04 0.026 1.507 ZFP106 zinc finger protein 106 homolog (mouse) 15 -40492312 NM_022473 15q15.1 Hs.511143 9

opioid peptide activity

intracellular

membrane fraction

nucleus

nucleolus

cytosol

zinc ion binding

insulin receptor signaling pathway

SH3 domain binding

metal ion binding

 
204629_at 0.586 6.712 5.193 1.043e-04 0.026 1.505 PARVB parvin, beta 22 42726505, 42751500 NM_013327 22q13.2-q13.33 Hs.475074 18

actin binding

protein binding

cytoplasm

cytoskeleton

plasma membrane

focal adhesion

cell adhesion

cell junction

Focal adhesion

227239_at -1.183 8.467 -5.190 1.051e-04 0.026 1.499 FAM126A family with sequence similarity 126, member A 7 -22947402 AV734839 7p15.3 Hs.85603 9

signal transducer activity

cellular_component

cytoplasm

biological_process

membrane

 
222919_at -0.748 12.085 -5.190 1.051e-04 0.026 1.498 TRDN triadin 6 -123579181 AA192306 6q22-q23 Hs.654601 19

receptor binding

cytoplasm

plasma membrane

muscle contraction

integral to membrane

sarcoplasmic reticulum

 
219256_s_at 0.627 4.260 5.188 1.055e-04 0.026 1.495 SH3TC1 SH3 domain and tetratricopeptide repeats 1 4 8251959 NM_018986 4p16.1 Hs.479116 5

binding

cellular_component

biological_process

 
229177_at 0.520 5.551 5.186 1.058e-04 0.026 1.492 C16orf89 chromosome 16 open reading frame 89 16 -5034123 AI823572 16p13.3 Hs.11782 4

extracellular region

 
202003_s_at 0.874 10.017 5.184 1.063e-04 0.026 1.488 ACAA2 acetyl-Coenzyme A acyltransferase 2 18 -45563871 NM_006111 18q21.1 Hs.200136 10

acetyl-CoA C-acyltransferase activity

mitochondrion

mitochondrial inner membrane

lipid metabolic process

fatty acid metabolic process

cholesterol biosynthetic process

metabolic process

acyltransferase activity

transferase activity

Fatty acid elongation in mitochondria

Fatty acid metabolism

Valine, leucine and isoleucine degradation

Metabolic pathways

209190_s_at -0.490 7.858 -5.177 1.076e-04 0.026 1.476 DIAPH1 diaphanous homolog 1 (Drosophila) 5 -140874771 AF051782 5q31 Hs.529451 33

actin binding

receptor binding

cytoplasm

cytoskeleton

plasma membrane

sensory perception of sound

cellular component organization

Rho GTPase binding

actin cytoskeleton organization

ruffle membrane

cell projection

Focal adhesion

Regulation of actin cytoskeleton

218858_at -1.001 9.627 -5.172 1.087e-04 0.026 1.467 DEPDC6 DEP domain containing 6 8 120955080 NM_022783 8q24.12 Hs.112981 11

protein binding

intracellular

negative regulation of protein kinase activity

intracellular signaling cascade

negative regulation of TOR signaling pathway

regulation of apoptosis

negative regulation of cell size

 
238613_at -0.722 9.818 -5.170 1.092e-04 0.026 1.463 ZAK sterile alpha motif and leucine zipper containing kinase AZK 2 173648810, 173648810 AI475164 2q24.2 Hs.444451 24

cell cycle checkpoint

DNA damage checkpoint

nucleotide binding

activation of MAPKK activity

magnesium ion binding

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

protein tyrosine kinase activity

ATP binding

nucleus

cytoplasm

response to stress

cell cycle

cell cycle arrest

protein kinase cascade

activation of JUN kinase activity

cell death

cell proliferation

response to radiation

transferase activity

cell differentiation

identical protein binding

positive regulation of apoptosis

MAPK signaling pathway

Tight junction

221027_s_at 0.846 8.404 5.167 1.097e-04 0.026 1.459 PLA2G12A phospholipase A2, group XIIA 4 -110850594 NM_030821 4q25 Hs.389452 10

calcium ion binding

extracellular region

intracellular

cytoplasm

endoplasmic reticulum

Golgi apparatus

phospholipid metabolic process

biological_process

lipid catabolic process

hydrolase activity

calcium-dependent phospholipase A2 activity

Glycerophospholipid metabolism

Ether lipid metabolism

Arachidonic acid metabolism

Linoleic acid metabolism

alpha-Linolenic acid metabolism

Metabolic pathways

MAPK signaling pathway

Vascular smooth muscle contraction

VEGF signaling pathway

Fc epsilon RI signaling pathway

Long-term depression

GnRH signaling pathway

224820_at 1.013 9.256 5.163 1.106e-04 0.026 1.451 FAM36A family with sequence similarity 36, member A 1 243065261 AA831192 1q44 Hs.715571 5

membrane

integral to membrane

 
204875_s_at 0.422 2.407 5.149 1.137e-04 0.026 1.426 GMDS GDP-mannose 4,6-dehydratase 6 -1569039 NM_001500 6p25 Hs.144496 Hs.660919 11

binding

intracellular

cytoplasm

carbohydrate metabolic process

leukocyte adhesion

GDP-mannose 4,6-dehydratase activity

lyase activity

GDP-mannose metabolic process

'de novo' GDP-L-fucose biosynthetic process

cellular metabolic process

coenzyme binding

Fructose and mannose metabolism

Amino sugar and nucleotide sugar metabolism

Metabolic pathways

232473_at 0.636 4.405 5.145 1.145e-04 0.027 1.419 PRPF18 PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae) 10 13668944 AU144329 10p13 Hs.161181 6

nucleus

spliceosomal complex

mRNA processing

RNA splicing

nuclear speck

 
1555310_a_at 0.561 5.885 5.136 1.165e-04 0.027 1.404 PAK6 p21 protein (Cdc42/Rac)-activated kinase 6 15 38296920, 38319326 BC035596 15q14 Hs.513645 13

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

transferase activity

ErbB signaling pathway

Axon guidance

Focal adhesion

T cell receptor signaling pathway

Regulation of actin cytoskeleton

Renal cell carcinoma

218546_at 0.806 6.346 5.133 1.172e-04 0.027 1.398 C1orf115 chromosome 1 open reading frame 115 1 218930250 NM_024709 1q41 Hs.519839 6

membrane

integral to membrane

 
239203_at -1.465 8.595 -5.132 1.176e-04 0.027 1.395 C7orf53 chromosome 7 open reading frame 53 7 111908143, 111908301 AW014728 7q31.1 Hs.396189 5

membrane

integral to membrane

 
202931_x_at -0.674 10.850 -5.127 1.187e-04 0.027 1.386 BIN1 bridging integrator 1 2 -127522077, -127522076 NM_004305 2q14 Hs.193163 69

protein binding

nucleus

cytoplasm

multicellular organismal development

cell proliferation

actin cytoskeleton

regulation of endocytosis

cell differentiation

interspecies interaction between organisms

 
208998_at 1.314 9.646 5.126 1.188e-04 0.027 1.385 UCP2 uncoupling protein 2 (mitochondrial, proton carrier) 11 -73363363 U94592 11q13 Hs.80658 153

response to superoxide

binding

mitochondrion

mitochondrial inner membrane

transport

mitochondrial transport

proton transport

membrane

integral to membrane

 
201223_s_at -0.560 9.235 -5.122 1.197e-04 0.027 1.378 RAD23B RAD23 homolog B (S. cerevisiae) 9 109085364 NM_002874 9q31.2 Hs.521640 54

nucleotide-excision repair, DNA damage removal

damaged DNA binding

single-stranded DNA binding

protein binding

nucleus

nucleoplasm

cytoplasm

cytosol

response to DNA damage stimulus

modification-dependent protein catabolic process

proteasomal ubiquitin-dependent protein catabolic process

protein complex

Nucleotide excision repair

204185_x_at -0.750 9.597 -5.121 1.201e-04 0.027 1.375 PPID peptidylprolyl isomerase D 4 -159849728 NM_005038 4q31.3 Hs.581725 25

peptidyl-prolyl cis-trans isomerase activity

cytoplasm

protein folding

cyclosporin A binding

isomerase activity

heat shock protein binding

Calcium signaling pathway

Parkinson's disease

Huntington's disease

228618_at 0.523 5.843 5.119 1.204e-04 0.027 1.373 PEAR1 platelet endothelial aggregation receptor 1 1 155130146 AL040178 1q23.1 Hs.142003 Hs.715070 3

plasma membrane

integral to membrane

 
211063_s_at -0.491 8.090 -5.115 1.214e-04 0.027 1.365 NCK1 NCK adaptor protein 1 3 138063762 BC006403 3q21 Hs.477693 110

receptor binding

cytoplasm

endoplasmic reticulum

regulation of translation

actin filament organization

signal complex assembly

cytoskeletal adaptor activity

vesicle membrane

cell migration

protein domain specific binding

lamellipodium assembly

receptor signaling complex scaffold activity

positive regulation of actin filament polymerization

positive regulation of T cell proliferation

T cell activation

ErbB signaling pathway

Axon guidance

T cell receptor signaling pathway

Pathogenic Escherichia coli infection - EHEC

225876_at 0.814 5.801 5.112 1.222e-04 0.027 1.359 NIPAL3 NIPA-like domain containing 3 1 24614831 T84558 1p36.12-p35.1 Hs.523442 6

membrane

integral to membrane

 
225466_at -0.607 7.832 -5.094 1.266e-04 0.028 1.327 PATL1 protein associated with topoisomerase II homolog 1 (yeast) 11 -59160767 BG291961 11q12.1 Hs.591960 8

cytoplasmic mRNA processing body

cytoplasm

RNA degradation

233899_x_at -0.572 4.735 -5.093 1.268e-04 0.028 1.325 ZBTB10 zinc finger and BTB domain containing 10 8 81561002 AK024296 8q13-q21.1 Hs.591868 4

DNA binding

protein binding

intracellular

nucleus

nucleolus

zinc ion binding

regulation of transcription

metal ion binding

 
209806_at 0.830 6.025 5.078 1.304e-04 0.028 1.299 HIST1H2BK histone cluster 1, H2bk 6 -27214051 BC000893 6p21.33 Hs.437275 Hs.689116 26

nucleosome

DNA binding

nucleus

chromosome

nucleosome assembly

defense response to bacterium

Systemic lupus erythematosus

213473_at -0.519 6.935 -5.070 1.324e-04 0.028 1.285 BRAP BRCA1 associated protein 12 -110564332 AL042733 12q24 Hs.530940 12

ubiquitin-protein ligase activity

cytoplasm

zinc ion binding

negative regulation of signal transduction

ligase activity

modification-dependent protein catabolic process

identical protein binding

metal ion binding

 
202577_s_at -0.663 6.353 -5.070 1.326e-04 0.028 1.284 DDX19A DEAD (Asp-Glu-Ala-As) box polypeptide 19A 16 68938324 BC005162 16q22.1 Hs.656037 5

nucleotide binding

RNA binding

helicase activity

ATP binding

nucleus

nuclear pore

cytoplasm

ATP-dependent helicase activity

protein transport

membrane

hydrolase activity

mRNA transport

intracellular protein transmembrane transport

 
1568900_a_at 0.536 3.053 5.069 1.328e-04 0.028 1.283 ZNF568 zinc finger protein 568 19 42099073 BC031218 19q13.12 Hs.404220 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
235753_at 0.798 7.886 5.057 1.358e-04 0.029 1.262 HOXA7 homeobox A7 7 -27159862 AI492051 7p15-p14 Hs.660918 24

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anterior/posterior pattern formation

transcription repressor activity

sequence-specific DNA binding

negative regulation of keratinocyte differentiation

positive regulation of transcription from RNA polymerase II promoter

embryonic skeletal system morphogenesis

 
226028_at 0.614 7.036 5.040 1.406e-04 0.030 1.230 ROBO4 roundabout homolog 4, magic roundabout (Drosophila) 11 -124259324 AA156022 11q24.2 Hs.524121 19

angiogenesis

receptor activity

multicellular organismal development

integral to membrane

cell differentiation

regulation of cell migration

 
204422_s_at 1.391 3.435 5.039 1.409e-04 0.030 1.228 FGF2 fibroblast growth factor 2 (basic) 4 123967312 NM_002006 4q26-q27 Hs.284244 320

activation of MAPKK activity

activation of MAPK activity

induction of an organ

positive regulation of protein amino acid phosphorylation

protein binding

extracellular region

extracellular region

extracellular space

apoptosis

chemotaxis

signal transduction

Ras protein signal transduction

multicellular organismal development

nervous system development

growth factor activity

heparin binding

negative regulation of cell proliferation

fibroblast growth factor receptor signaling pathway

organ morphogenesis

glial cell differentiation

positive regulation of granule cell precursor proliferation

lung development

positive regulation of blood vessel endothelial cell migration

negative regulation of blood vessel endothelial cell migration

positive regulation of cell differentiation

positive regulation of angiogenesis

regulation of retinal cell programmed cell death

positive regulation of epithelial cell proliferation

positive regulation of cardiac muscle cell proliferation

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

239750_x_at -0.735 4.278 -5.036 1.416e-04 0.030 1.223 VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 18 9903954 AI671488 18p11.22 Hs.699980 18

signal transducer activity

structural molecule activity

protein binding

membrane fraction

endoplasmic reticulum

microtubule

plasma membrane

tight junction

membrane fusion

integral to membrane

vesicle

positive regulation of I-kappaB kinase/NF-kappaB cascade

protein heterodimerization activity

perinuclear region of cytoplasm

Tight junction

205011_at 0.569 6.303 5.027 1.441e-04 0.030 1.208 VWA5A von Willebrand factor A domain containing 5A 11 123491320, 123491320 NM_014622 11q23 Hs.152944 5    
212539_at -0.606 7.260 -5.026 1.443e-04 0.030 1.206 CHD1L chromodomain helicase DNA binding protein 1-like 1 145180914 AI422099 1q12 Hs.191164 12

nucleotide binding

DNA binding

helicase activity

ATP binding

nucleus

ATP-dependent helicase activity

hydrolase activity

 
213787_s_at 0.625 6.315 5.022 1.454e-04 0.030 1.199 EBP emopamil binding protein (sterol isomerase) X 48265107 AV702405 Xp11.23-p11.22 Hs.30619 19

C-8 sterol isomerase activity

skeletal system development

steroid delta-isomerase activity

transmembrane receptor activity

endoplasmic reticulum

microsome

integral to plasma membrane

cholesterol biosynthetic process

drug transporter activity

membrane

isomerase activity

hemopoiesis

cholestenol delta-isomerase activity

Steroid biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

212150_at -0.849 8.492 -5.022 1.456e-04 0.030 1.198 EFR3A EFR3 homolog A (S. cerevisiae) 8 132985540 AA805651 8q24.22 Hs.204564 4

binding

plasma membrane

 
217551_at 0.633 3.983 5.018 1.466e-04 0.030 1.191 LOC441453 similar to olfactory receptor, family 7, subfamily A, member 17 11   AA719797 11p15.1 Hs.523504 1    
228346_at 0.910 6.290 5.015 1.477e-04 0.030 1.185 ZNF844 zinc finger protein 844 19 12036545 H47630 19p13.2 Hs.646391 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
202077_at 0.472 12.059 5.014 1.478e-04 0.030 1.184 NDUFAB1 NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa 16 -23499835 NM_005003 16p12.2 Hs.189716 14

acyl carrier activity

fatty acid binding

calcium ion binding

mitochondrion

mitochondrial respiratory chain complex I

mitochondrial respiratory chain complex I

mitochondrial matrix

mitochondrial electron transport, NADH to ubiquinone

fatty acid biosynthetic process

transport

NADH dehydrogenase (ubiquinone) activity

electron transport chain

phosphopantetheine binding

mitochondrial membrane

mitochondrial membrane

cofactor binding

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

227321_at -1.081 7.016 -5.012 1.483e-04 0.030 1.181 GATS GATS, stromal antigen 3 opposite strand 7 -99644496, -99636215 D52585 7q22.1 Hs.556063 Hs.718406 4    
223339_at 0.664 7.497 5.008 1.497e-04 0.030 1.172 ATPIF1 ATPase inhibitory factor 1 1 28435197 BC001867   Hs.590908 13

angiogenesis

negative regulation of endothelial cell proliferation

calmodulin binding

mitochondrion

mitochondrion

mitochondrial proton-transporting ATP synthase complex

generation of precursor metabolites and energy

cell surface

ATPase inhibitor activity

ATPase inhibitor activity

protein homodimerization activity

angiostatin binding

negative regulation of nucleotide metabolic process

ATPase binding

ATPase binding

protein homotetramerization

negative regulation of hydrolase activity

negative regulation of hydrolase activity

 
202847_at 1.312 4.676 5.005 1.505e-04 0.030 1.167 PCK2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) 14 23633322, 23633322 NM_004563 14q11.2 Hs.75812 9

phosphoenolpyruvate carboxykinase (GTP) activity

GTP binding

mitochondrion

gluconeogenesis

lyase activity

purine nucleotide binding

manganese ion binding

metal ion binding

Glycolysis / Gluconeogenesis

Citrate cycle (TCA cycle)

Pyruvate metabolism

Metabolic pathways

PPAR signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

201667_at 0.851 7.602 5.002 1.513e-04 0.030 1.162 GJA1 gap junction protein, alpha 1, 43kDa 6 121798443 NM_000165 6q21-q23.2 Hs.74471 181

signal transducer activity

protein binding

cytoplasm

mitochondrial outer membrane

lysosome

early endosome

multivesicular body

endoplasmic reticulum

Golgi apparatus

plasma membrane

plasma membrane

integral to plasma membrane

fascia adherens

connexon complex

apoptosis

muscle contraction

cell-cell signaling

heart development

negative regulation of cell proliferation

response to pH

vascular transport

ion transmembrane transporter activity

ATP transport

gap junction assembly

SH3 domain binding

transmembrane transporter activity

cell junction

PDZ domain binding

Golgi-associated vesicle membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

membrane raft

positive regulation of protein catabolic process

neuron projection morphogenesis

protein oligomerization

regulation of calcium ion transport

Gap junction

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

219505_at 0.879 6.139 5.001 1.517e-04 0.030 1.160 CECR1 cat eye syndrome chromosome region, candidate 1 22 -16040193, -16040191 NM_017424 22q11.2 Hs.170310 10

extracellular region

extracellular space

Golgi apparatus

multicellular organismal development

growth factor activity

purine ribonucleoside monophosphate biosynthetic process

hydrolase activity

deaminase activity

 
213057_at 0.569 6.568 4.999 1.521e-04 0.030 1.157 ATPAF2 ATP synthase mitochondrial F1 complex assembly factor 2 17 -17862058 AW118608 17p11.2 Hs.528889 11

protein binding

mitochondrion

nuclear speck

proton-transporting ATP synthase complex assembly

 
229287_at -0.604 7.423 -4.995 1.533e-04 0.030 1.150 PCNX pecanex homolog (Drosophila) 14 70443874 BE326214 14q24.2 Hs.446559 10

membrane

integral to membrane

 
218211_s_at 0.720 7.239 4.988 1.554e-04 0.031 1.137 MLPH melanophilin 2 238060616 NM_024101 2q37.3 Hs.102406 23

protein binding

cytoplasm

intracellular protein transport

zinc ion binding

Rab GTPase binding

metal ion binding

 
217873_at -1.066 9.662 -4.986 1.562e-04 0.031 1.133 CAB39 calcium binding protein 39 2 231285800, 231286506 NM_016289 2q37.1 Hs.632536 14

protein binding

cytoplasm

mTOR signaling pathway

210652_s_at 0.990 4.608 4.978 1.586e-04 0.031 1.118 TTC39A tetratricopeptide repeat domain 39A 1 -51525518, -51525518 BC004399 1p32.3 Hs.112949 3

binding

cellular_component

biological_process

 
219604_s_at 0.402 4.535 4.975 1.595e-04 0.031 1.113 ZNF3 zinc finger protein 3 7 -99505529, -99499588 NM_017715 7q22.1 Hs.435302 10

transcription factor activity

intracellular

nucleus

nucleus

nucleolus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

cell differentiation

identical protein binding

leukocyte activation

metal ion binding

 
204608_at 0.718 5.290 4.974 1.599e-04 0.031 1.111 ASL argininosuccinate lyase 7 65178210, 65178268 NM_000048 7cen-q11.2 Hs.632015 19

urea cycle

argininosuccinate metabolic process

response to hypoxia

kidney development

liver development

argininosuccinate lyase activity

cytoplasm

arginine catabolic process

response to nutrient

locomotory behavior

cellular amino acid biosynthetic process

post-embryonic development

lyase activity

ammonia assimilation cycle

arginine biosynthetic process via ornithine

response to peptide hormone stimulus

response to steroid hormone stimulus

response to glucocorticoid stimulus

response to cAMP

Alanine, aspartate and glutamate metabolism

Arginine and proline metabolism

Metabolic pathways

214846_s_at -1.021 7.757 -4.970 1.611e-04 0.031 1.104 ALPK3 alpha-kinase 3 15 83160914 AB037751 15q25.2 Hs.459183 5

protein serine/threonine kinase activity

ATP binding

nucleus

protein amino acid phosphorylation

multicellular organismal development

heart development

kinase activity

transferase activity

 
207550_at 0.532 3.170 4.957 1.654e-04 0.032 1.080 MPL myeloproliferative leukemia virus oncogene 1 43576061 NM_005373 1p34 Hs.82906 85

cytokine receptor activity

plasma membrane

integral to plasma membrane

cell surface receptor linked signal transduction

cell proliferation

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

241233_x_at 0.410 7.465 4.947 1.685e-04 0.032 1.063 C21orf81 ankyrin repeat domain 20 family, member A3 pseudogene 21 -14237966 AI978581 21q11.2 Hs.364456 2    
206799_at 1.845 5.452 4.946 1.689e-04 0.032 1.060 SCGB1D2 secretoglobin, family 1D, member 2 11 61766299 NM_006551 11q13 Hs.204096 9

binding

extracellular region

extracellular space

 
218176_at 0.425 6.626 4.946 1.690e-04 0.032 1.060 MAGEF1 melanoma antigen family F, 1 3 -185910848 NM_022149 3q13 Hs.306123 4    
213587_s_at 0.705 6.317 4.946 1.690e-04 0.032 1.060 ATP6V0E2 ATPase, H+ transporting V0 subunit e2 7 149200989, 149200989 AI884867 7q36.1 Hs.556998 Hs.698060 5

ion transport

vacuolar acidification

hydrogen ion transmembrane transporter activity

ATP synthesis coupled proton transport

ATP hydrolysis coupled proton transport

proton transport

membrane

integral to membrane

cell growth

hydrolase activity

proton-transporting V-type ATPase, V0 domain

ATPase activity, coupled to transmembrane movement of ions

Oxidative phosphorylation

Metabolic pathways

Vibrio cholerae infection

Epithelial cell signaling in Helicobacter pylori infection

225308_s_at 0.669 6.133 4.943 1.699e-04 0.032 1.055 TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 2 159533391 AB051515 2q24.2 Hs.61590 6

binding

plasma membrane

postsynaptic density

cell junction

synapse

postsynaptic membrane

 
221505_at -0.559 8.351 -4.941 1.706e-04 0.032 1.051 ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E 1 -148457341, -148457341 AW612574 1q21.2 Hs.656466 14

protein binding

nucleus

cytoplasm

cytoplasmic membrane-bounded vesicle

phosphatase inhibitor activity

 
1554822_at -1.585 5.931 -4.938 1.716e-04 0.032 1.046 PHTF2 putative homeodomain transcription factor 2 7 77266044, 77266044, 77307382, 77307382 BC022419 7q11.23-q21 Hs.203965 Hs.601884 11

DNA binding

nucleus

endoplasmic reticulum

regulation of transcription

 
213035_at -1.006 7.921 -4.931 1.741e-04 0.032 1.033 ANKRD28 ankyrin repeat domain 28 3 -15683747 AI081194 3p25.1 Hs.335239 10

protein binding

nucleus

nucleoplasm

 
208669_s_at -0.504 9.563 -4.928 1.751e-04 0.032 1.027 EID1 EP300 interacting inhibitor of differentiation 1 15 46957581 AF109873 15q21.1-q21.2 Hs.255973 Hs.714048 12

negative regulation of transcription from RNA polymerase II promoter

transcription corepressor activity

protein binding

cellular_component

nucleus

cytoplasm

cell cycle

specific transcriptional repressor activity

cell differentiation

histone acetyltransferase regulator activity

histone acetyltransferase binding

regulation of transcription

 
225812_at 0.804 6.637 4.924 1.762e-04 0.032 1.021 C6orf225 chromosome 6 open reading frame 225 6 112515366 N36759 6q21 Hs.591340 1    
200759_x_at -0.600 11.280 -4.924 1.762e-04 0.032 1.021 NFE2L1 nuclear factor (erythroid-derived 2)-like 1 17 43480684 NM_003204 17q21.3 Hs.514284 20

transcription factor activity

transcription cofactor activity

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

heme biosynthetic process

inflammatory response

anatomical structure morphogenesis

sequence-specific DNA binding

protein dimerization activity

 
227923_at 0.691 7.008 4.923 1.767e-04 0.032 1.019 SHANK3 SH3 and multiple ankyrin repeat domains 3 22 49459935 BF439330 22q13.3 Hs.149035 21

MAPKKK cascade

embryonic epithelial tube formation

protein binding

cytoplasm

plasma membrane

postsynaptic density

SH3 domain binding

cell junction

synapse

postsynaptic membrane

 
235595_at 0.502 6.625 4.922 1.772e-04 0.032 1.016 ARHGEF2 Rho/Rac guanine nucleotide exchange factor (GEF) 2 1 -154183253, -154183253 AW299534 1q21-q22 Hs.655209 28

cell morphogenesis

guanyl-nucleotide exchange factor activity

intracellular

cytoplasm

Golgi apparatus

spindle

microtubule

tight junction

intracellular protein transport

actin filament organization

negative regulation of microtubule depolymerization

cell cycle

mitosis

intracellular signaling cascade

microtubule binding

zinc ion binding

diacylglycerol binding

cell junction

Rac guanyl-nucleotide exchange factor activity

regulation of Rho protein signal transduction

regulation of cell proliferation

metal ion binding

Rac GTPase binding

cell division

Pathogenic Escherichia coli infection - EHEC

206329_at 0.892 6.287 4.921 1.775e-04 0.032 1.015 EXTL1 exostoses (multiple)-like 1 1 26220857 NM_004455 1p36.1 Hs.150956 11

skeletal system development

protein binding

endoplasmic reticulum

membrane

integral to membrane

transferase activity, transferring hexosyl groups

intrinsic to endoplasmic reticulum membrane

glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity

Heparan sulfate biosynthesis

Metabolic pathways

207551_s_at -0.567 7.380 -4.918 1.784e-04 0.032 1.010 MSL3 male-specific lethal 3 homolog (Drosophila) X 11686198, 11686198, 11687681 NM_006800 Xp22.3 Hs.655288 6

chromatin

chromatin binding

transcription factor activity

nucleus

chromatin assembly or disassembly

transcription from RNA polymerase II promoter

multicellular organismal development

chromatin modification

regulation of transcription

 
1556839_s_at 0.785 4.206 4.916 1.791e-04 0.032 1.006 SPTBN5 spectrin, beta, non-erythrocytic 5 15 -39927635 AA515490 15q21 Hs.709819 3

actin binding

cytoplasm

cytoskeleton

spectrin

membrane

actin cytoskeleton organization

actin filament capping

 
202041_s_at 0.595 8.116 4.914 1.797e-04 0.032 1.003 FIBP fibroblast growth factor (acidic) intracellular binding protein 11 -65407786 NM_004214 11q13.1 Hs.7768 10

protein binding

membrane fraction

nucleus

mitochondrion

fibroblast growth factor receptor signaling pathway

membrane

fibroblast growth factor binding

 
232183_at -0.548 6.202 -4.911 1.810e-04 0.032 0.996 SERAC1 serine active site containing 1 6 -158450523 AA128978 6q25.3 Hs.154706 6

binding

membrane

integral to membrane

 
219090_at -1.496 7.810 -4.909 1.817e-04 0.032 0.993 SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 20 19141289 NM_020689 20p13 Hs.654790 2

calcium ion binding

ion transport

potassium ion transport

sodium ion transport

calcium ion transport

calcium, potassium:sodium antiporter activity

symporter activity

antiporter activity

membrane

integral to membrane

potassium ion binding

sodium ion binding

 
206024_at 0.516 3.309 4.908 1.818e-04 0.032 0.992 HPD 4-hydroxyphenylpyruvate dioxygenase 12 -120761815 NM_002150 12q24-qter Hs.2899 11

4-hydroxyphenylpyruvate dioxygenase activity

iron ion binding

endoplasmic reticulum

Golgi apparatus

L-phenylalanine catabolic process

tyrosine catabolic process

aromatic amino acid family metabolic process

oxidoreductase activity

metal ion binding

oxidation reduction

Ubiquinone and other terpenoid-quinone biosynthesis

Tyrosine metabolism

Phenylalanine metabolism

Metabolic pathways

201935_s_at -1.148 7.842 -4.905 1.829e-04 0.032 0.987 EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 1 -21005560 AI768122 1p36.12 Hs.467084 19

RNA cap binding

translation initiation factor activity

protein binding

regulation of translational initiation

RNA metabolic process

eukaryotic translation initiation factor 4F complex

interspecies interaction between organisms

 
208985_s_at -0.867 9.651 -4.902 1.840e-04 0.032 0.981 EIF3J eukaryotic translation initiation factor 3, subunit J 15 42616557 BC002719 15q21.1 Hs.404056 19

translation initiation factor activity

protein binding

cytoplasm

cytosol

eukaryotic translation initiation factor 3 complex

translational initiation

 
218082_s_at -0.555 7.293 -4.900 1.850e-04 0.032 0.976 UBP1 upstream binding protein 1 (LBP-1a) 3 -33404831, -33404831 NM_014517 3p22.3 Hs.643744 11

transcription factor activity

transcription corepressor activity

nucleus

regulation of transcription from RNA polymerase II promoter

negative regulation of transcription

specific transcriptional repressor activity

viral genome replication

 
229132_at -0.602 4.767 -4.898 1.855e-04 0.032 0.974 MINA MYC induced nuclear antigen 3 -99143350, -99143350 AI346432 3q11.2 Hs.607776 15

nucleus

nucleolus

cytoplasm

ribosome biogenesis

 
244741_s_at 1.654 6.388 4.895 1.865e-04 0.032 0.969 MGC9913 hypothetical protein MGC9913 19   BE855713 19q13.43 Hs.23133 1    
228902_at -0.485 5.240 -4.890 1.885e-04 0.033 0.959 NUP214 nucleoporin 214kDa 9 132990801 AA516455 9q34.1 Hs.654530 47

transporter activity

protein binding

nucleus

nuclear pore

cytosol

protein export from nucleus

protein transport

mRNA transport

intracellular protein transmembrane transport

 
224751_at -0.739 8.277 -4.888 1.891e-04 0.033 0.956 PL-5283 PL-5283 protein 7 134997760 BE738276 7q33 Hs.200022 3    
226027_at 0.622 6.573 4.884 1.908e-04 0.033 0.948 C9orf119 chromosome 9 open reading frame 119 9 130078245 BG541668 9q34.11 Hs.259594 1    
205830_at 2.049 4.555 4.882 1.917e-04 0.033 0.944 CLGN calmegin 4 -141529056 NM_004362 4q28.3-q31.1 Hs.86368 11

calcium ion binding

endoplasmic reticulum

protein folding

single fertilization

membrane

integral to membrane

unfolded protein binding

 
242396_at 0.558 3.868 4.877 1.935e-04 0.033 0.935 LOC100132798 similar to hCG1774772 15   AA195408 15q26.2        
217924_at -0.583 6.187 -4.875 1.942e-04 0.033 0.931 C6orf106 chromosome 6 open reading frame 106 6 -34663047 AL523965 6p21.31 Hs.643498 10    
206175_x_at 0.533 4.863 4.870 1.961e-04 0.033 0.923 ZNF222 zinc finger protein 222 19 49221333 NM_013360 19q13.2 Hs.279840 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
201906_s_at 1.057 7.024 4.869 1.965e-04 0.033 0.921 CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like 3 37878672 NM_005808 3p21.3 Hs.475963 18

molecular_function

phosphoprotein phosphatase activity

cellular_component

nucleus

biological_process

hydrolase activity

 
228696_at 0.404 4.077 4.867 1.973e-04 0.033 0.917 SLC45A3 solute carrier family 45, member 3 1 -203893603 AA631143 1q32.1 Hs.278695 9

transport

membrane

integral to membrane

 
227054_at 0.437 7.055 4.860 2.001e-04 0.033 0.904 N6AMT2 N-6 adenine-specific DNA methyltransferase 2 (putative) 13 -20201072 AI141584 13q12.11 Hs.26674 3

nucleic acid binding

methyltransferase activity

transferase activity

methylation

 
226238_at 0.671 8.022 4.859 2.004e-04 0.033 0.902 MCEE methylmalonyl CoA epimerase 2 -71190313 AI934339 2p13.3 Hs.94949 7

methylmalonyl-CoA epimerase activity

mitochondrion

isomerase activity

L-methylmalonyl-CoA metabolic process

Valine, leucine and isoleucine degradation

Propanoate metabolism

Metabolic pathways

212995_x_at 0.653 8.794 4.857 2.013e-04 0.033 0.898 FAM128B family with sequence similarity 128, member B 2 130656172 BG255188 2q21.1 Hs.469925 Hs.516450 2    
225381_at 0.958 5.988 4.852 2.032e-04 0.033 0.890 LOC399959 hypothetical LOC399959 11 -121465022 AW162210 11q24.1 Hs.44098 2    
228646_at 0.762 5.518 4.845 2.061e-04 0.034 0.876 PPP1R1C protein phosphatase 1, regulatory (inhibitor) subunit 1C 2 182558795 AI806944 2q31.3 Hs.10941 3

phosphoprotein phosphatase inhibitor activity

cytoplasm

signal transduction

 
218265_at -0.461 6.809 -4.837 2.091e-04 0.034 0.863 SECISBP2 SECIS binding protein 2 9 91123231 NM_024077 9q22.2 Hs.59804 20

RNA binding

mRNA 3'-UTR binding

nucleus

translation

 
219448_at -2.166 7.532 -4.834 2.105e-04 0.034 0.857 TMEM70 transmembrane protein 70 8 75050983 BC002748 8q21.11 Hs.106650 7

molecular_function

mitochondrion

membrane

integral to membrane

integral to mitochondrial membrane

mitochondrial proton-transporting ATP synthase complex assembly

 
225326_at -0.478 7.474 -4.833 2.107e-04 0.034 0.856 RBM27 RNA binding motif protein 27 5 145563355 AB037732 5q32 Hs.61441 8

nucleotide binding

RNA binding

nucleus

cytoplasm

zinc ion binding

nuclear speck

metal ion binding

 
222287_at -0.840 11.343 -4.833 2.109e-04 0.034 0.855 TRDN triadin 6 -123579181 AW969675 6q22-q23 Hs.654601 19

receptor binding

cytoplasm

plasma membrane

muscle contraction

integral to membrane

sarcoplasmic reticulum

 
222990_at -0.421 9.423 -4.828 2.131e-04 0.034 0.846 UBQLN1 ubiquilin 1 9 -85464697 AW204104 9q21.2-q21.3 9q22 Hs.9589 46

nucleus

cytoplasm

cytosol

kinase binding

protein complex

perinuclear region of cytoplasm

 
226905_at 0.831 7.645 4.827 2.136e-04 0.034 0.843 FAM101B family with sequence similarity 101, member B 17 -289998 BG036514 17p13 Hs.345588 Hs.596411 Hs.719324 4    
201288_at 0.767 7.825 4.813 2.194e-04 0.035 0.818 ARHGDIB Rho GDP dissociation inhibitor (GDI) beta 12 -14986216 NM_001175 12p12.3 Hs.504877 34

Rho GDP-dissociation inhibitor activity

GTPase activator activity

protein binding

cytoplasm

cytoskeleton

cell motion

immune response

negative regulation of cell adhesion

Rho protein signal transduction

multicellular organismal development

cytoplasmic membrane-bounded vesicle

actin cytoskeleton organization

Neurotrophin signaling pathway

200758_s_at -0.580 11.205 -4.813 2.194e-04 0.035 0.818 NFE2L1 nuclear factor (erythroid-derived 2)-like 1 17 43480684 AI361227 17q21.3 Hs.514284 20

transcription factor activity

transcription cofactor activity

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

heme biosynthetic process

inflammatory response

anatomical structure morphogenesis

sequence-specific DNA binding

protein dimerization activity

 
223044_at 0.605 9.868 4.802 2.241e-04 0.035 0.799 SLC40A1 solute carrier family 40 (iron-regulated transporter), member 1 2 -190133560 AL136944 2q32 Hs.643005 73

iron ion transmembrane transporter activity

iron ion binding

cytoplasm

plasma membrane

integral to plasma membrane

ion transport

iron ion transport

cellular iron ion homeostasis

synaptic vesicle

anatomical structure morphogenesis

 
220340_at 1.164 6.134 4.802 2.241e-04 0.035 0.799 KIAA1772 KIAA1772 18 17076200 NM_024935 18q11.1-q11.2 Hs.149020 4

membrane

integral to membrane

 
215884_s_at -0.713 8.157 -4.802 2.244e-04 0.035 0.798 UBQLN2 ubiquilin 2 X 56606796 AK001029 Xp11.23-p11.1 Hs.179309 20

binding

nucleus

cytoplasm

plasma membrane

 
210867_at -0.598 5.238 -4.795 2.274e-04 0.036 0.785 CNOT4 CCR4-NOT transcription complex, subunit 4 7 -134723303, -134697088 AF180475 7q22-qter Hs.490224 7

nucleotide binding

RNA binding

protein binding

nucleus

cytoplasm

zinc ion binding

ligase activity

modification-dependent protein catabolic process

regulation of transcription

metal ion binding

RNA degradation

212248_at -0.538 8.201 -4.793 2.281e-04 0.036 0.783 MTDH metadherin 8 98725582 AI886796 8q22.1 Hs.377155 23

negative regulation of transcription from RNA polymerase II promoter

protein binding

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

tight junction

membrane

integral to membrane

cell junction

nuclear membrane

perinuclear region of cytoplasm

NF-kappaB binding

positive regulation of NF-kappaB transcription factor activity

 
231887_s_at 0.527 6.042 4.792 2.289e-04 0.036 0.779 KIAA1274 KIAA1274 10 71908569 AB033100 10q22.1 Hs.202351 5    
212935_at 0.547 6.813 4.784 2.323e-04 0.036 0.765 MCF2L MCF.2 cell line derived transforming sequence-like 13 112670757, 112681655 AB002360 13q34 Hs.170422 Hs.597691 15

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

intracellular

cytoplasm

mitochondrion

plasma membrane

intracellular signaling cascade

regulation of Rho protein signal transduction

 
224918_x_at 1.822 6.884 4.782 2.331e-04 0.036 0.762 MGST1 microsomal glutathione S-transferase 1 12 16391342, 16391845, 16391978, 16397617 AI220117 12p12.3-p12.1 Hs.389700 22

glutathione transferase activity

mitochondrion

mitochondrial outer membrane

mitochondrial inner membrane

endoplasmic reticulum

microsome

glutathione metabolic process

membrane

transferase activity

Glutathione metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

205603_s_at -1.325 6.759 -4.782 2.333e-04 0.036 0.762 DIAPH2 diaphanous homolog 2 (Drosophila) X 95826317, 95826317 NM_007309 Xq21.33 Hs.226483 Hs.716101 14

cytokinesis

actin binding

receptor binding

cytoplasm

early endosome

Golgi apparatus

cytosol

multicellular organismal development

cellular component organization

Rho GTPase binding

actin cytoskeleton organization

cell differentiation

oogenesis

Regulation of actin cytoskeleton

205902_at -0.762 6.119 -4.779 2.345e-04 0.036 0.757 KCNN3 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 1 -152946536, -152946536 AJ251016 1q21.3 Hs.490765 40

ion channel activity

calmodulin binding

ion transport

potassium ion transport

membrane

integral to membrane

small conductance calcium-activated potassium channel activity

 
1554485_s_at 0.686 3.900 4.779 2.348e-04 0.036 0.756 TMEM37 transmembrane protein 37 2 119905915 BI825302 2q14.2 Hs.26216 3

voltage-gated ion channel activity

calcium channel activity

calcium ion binding

ion transport

calcium ion transport

membrane

integral to membrane

 
215440_s_at 1.374 4.638 4.776 2.359e-04 0.036 0.751 BEX4 brain expressed, X-linked 4 X 102356675, 102356675 AL523320 Xq22.1-q22.3 Hs.184736 4

nucleus

cytoplasm

 
217992_s_at 0.429 5.492 4.775 2.364e-04 0.036 0.749 EFHD2 EF-hand domain family, member D2 1 15608977 NM_024329 1p36.21 Hs.465374 8

calcium ion binding

protein binding

 
201936_s_at -1.113 7.459 -4.771 2.384e-04 0.036 0.741 EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 1 -21005560 NM_003760 1p36.12 Hs.467084 19

RNA cap binding

translation initiation factor activity

protein binding

regulation of translational initiation

RNA metabolic process

eukaryotic translation initiation factor 4F complex

interspecies interaction between organisms

 
201538_s_at -0.705 7.274 -4.769 2.394e-04 0.036 0.737 DUSP3 dual specificity phosphatase 3 17 -39199014 NM_004090 17q21 Hs.181046 21

protein tyrosine phosphatase activity

protein tyrosine phosphatase activity

nucleoplasm

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

MAPK signaling pathway

241364_at -0.874 7.624 -4.769 2.395e-04 0.036 0.737 TMEM57 transmembrane protein 57 1 25629974 AA827805 1p36.11 Hs.189782 7

membrane

integral to membrane

 
200914_x_at -0.748 10.569 -4.769 2.396e-04 0.036 0.737 KTN1 kinectin 1 (kinesin receptor) 14 55116677, 55116677 BF589024 14q22.1 Hs.509414 30

molecular_function

membrane fraction

endoplasmic reticulum

endoplasmic reticulum membrane

integral to plasma membrane

microtubule-based movement

membrane

 
213012_at -1.307 7.748 -4.764 2.415e-04 0.036 0.729 NEDD4 neural precursor cell expressed, developmentally down-regulated 4 15 -53906413, -53906413 D42055 15q Hs.1565 79

ubiquitin ligase complex

chromatin

ubiquitin-protein ligase activity

intracellular

membrane fraction

cytoplasm

cytosol

plasma membrane

cell cortex

protein modification process

protein targeting to lysosome

pathogenesis

negative regulation of sodium ion transport

negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage

positive regulation of phosphoinositide 3-kinase cascade

apicolateral plasma membrane

ligase activity

acid-amino acid ligase activity

transmission of virus

sodium channel inhibitor activity

protein domain specific binding

modification-dependent protein catabolic process

neuron projection development

receptor internalization

beta-2 adrenergic receptor binding

receptor catabolic process

cellular response to UV

protein ubiquitination during ubiquitin-dependent protein catabolic process

glucocorticoid receptor signaling pathway

ubiquitin binding

ubiquitin binding

positive regulation of protein catabolic process

positive regulation of nucleocytoplasmic transport

perinuclear region of cytoplasm

phosphoserine binding

phosphothreonine binding

progesterone receptor signaling pathway

response to calcium ion

RNA polymerase binding

proline-rich region binding

Ubiquitin mediated proteolysis

Endocytosis

207196_s_at -0.501 8.706 -4.764 2.420e-04 0.036 0.728 TNIP1 TNFAIP3 interacting protein 1 5 -150389698 NM_006058 5q32-q33.1 Hs.355141 31

protein binding

intracellular

nucleus

cytoplasm

translation

defense response

glycoprotein biosynthetic process

pathogenesis

negative regulation of viral genome replication

 
224839_s_at 1.120 7.443 4.763 2.423e-04 0.036 0.727 GPT2 glutamic pyruvate transaminase (alanine aminotransferase) 2 16 45475808, 45476602 BG328998 16q12.1 Hs.460693 9

L-alanine:2-oxoglutarate aminotransferase activity

transaminase activity

biosynthetic process

pyridoxal phosphate binding

Alanine, aspartate and glutamate metabolism

Carbon fixation in photosynthetic organisms

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Metabolic pathways

201161_s_at -0.613 12.823 -4.763 2.424e-04 0.036 0.726 CSDA cold shock domain protein A 12 -10742944 NM_003651 12p13.1 Hs.221889 20

negative regulation of transcription from RNA polymerase II promoter

double-stranded DNA binding

transcription factor activity

RNA polymerase II transcription factor activity

transcription corepressor activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

response to cold

Tight junction

223125_s_at -0.608 9.410 -4.761 2.431e-04 0.036 0.723 C1orf21 chromosome 1 open reading frame 21 1 182622772 AL563236 1q25 Hs.497159 Hs.719188 8    
207087_x_at 0.607 11.167 4.755 2.459e-04 0.036 0.713 ANK1 ankyrin 1, erythrocytic 8 -41629901, -41629901, -41629900 NM_020478 8p11.1 Hs.654438 Hs.667377 49

structural constituent of cytoskeleton

cytoplasm

plasma membrane

exocytosis

cytoskeleton organization

signal transduction

cytoskeletal adaptor activity

spectrin-associated cytoskeleton

basolateral plasma membrane

sarcoplasmic reticulum

enzyme binding

spectrin binding

M band

maintenance of epithelial cell apical/basal polarity

 
213572_s_at -0.708 6.314 -4.753 2.471e-04 0.036 0.708 SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 6 -2778732 AI554300 6p25 Hs.381167 18

serine-type endopeptidase inhibitor activity

cytoplasm

peptidase inhibitor activity

 
228367_at 1.016 8.510 4.735 2.560e-04 0.037 0.675 ALPK2 alpha-kinase 2 18 -54299461 BE551416 18q21.31-q21.32 Hs.628152 2

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

kinase activity

transferase activity

 
202492_at -0.440 7.642 -4.734 2.565e-04 0.037 0.674 ATG9A ATG9 autophagy related 9 homolog A (S. cerevisiae) 2 -219792345 NM_024085 2q35 Hs.323363 10

autophagic vacuole formation

autophagy

protein transport

membrane

integral to membrane

cytoplasmic vesicle

 
218309_at 0.483 7.017 4.727 2.604e-04 0.038 0.660 CAMK2N1 calcium/calmodulin-dependent protein kinase II inhibitor 1 1 -20681470 NM_018584 1p36.12 Hs.197922 4

plasma membrane

calcium-dependent protein kinase inhibitor activity

postsynaptic density

synaptosome

protein kinase binding

cell junction

dendrite

cell soma

synapse

postsynaptic membrane

 
226876_at 0.728 7.080 4.725 2.612e-04 0.038 0.657 FAM101B family with sequence similarity 101, member B 17 -289998 AI961778 17p13 Hs.345588 Hs.596411 Hs.719324 4    
229730_at -1.007 9.352 -4.722 2.629e-04 0.038 0.651 SMTNL2 smoothelin-like 2 17 4434024, 4434582 AI193973 17p13.2 Hs.441709 2    
210694_s_at 0.664 5.799 4.721 2.631e-04 0.038 0.650 MID1 midline 1 (Opitz/BBB syndrome) X -10373595, -10373595, -10373595 AF041209 Xp22 Hs.27695 38

microtubule cytoskeleton organization

protein binding

intracellular

cytoplasm

microtubule

microtubule associated complex

negative regulation of microtubule depolymerization

pattern specification process

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

Ubiquitin mediated proteolysis

228920_at 0.538 5.963 4.721 2.633e-04 0.038 0.649 ZNF260 zinc finger protein 260 19 -41693433 BE328273 19q13.12 Hs.18103 5

DNA binding

intracellular

nucleus

multicellular organismal development

zinc ion binding

regulation of transcription

metal ion binding

 
218844_at 0.591 7.076 4.721 2.635e-04 0.038 0.649 ACSF2 acyl-CoA synthetase family member 2 17 45858517 NM_025149 17q21.33 Hs.288959 7

nucleotide binding

ATP binding

mitochondrion

lipid metabolic process

fatty acid metabolic process

metabolic process

ligase activity

 
203138_at -0.721 8.667 -4.715 2.664e-04 0.038 0.639 HAT1 histone acetyltransferase 1 2 172487180 NM_003642 2q31.2-q33.1 Hs.632532 14

histone acetyltransferase activity

protein binding

nucleus

cytoplasm

DNA packaging

chromatin silencing at telomere

internal protein amino acid acetylation

acyltransferase activity

chromatin modification

histone acetylation

transferase activity

 
220076_at -0.765 5.560 -4.712 2.679e-04 0.038 0.633 ANKH ankylosis, progressive homolog (mouse) 5 -14757908 NM_019847 5p15.1 Hs.156727 36

skeletal system development

inorganic phosphate transmembrane transporter activity

integral to plasma membrane

transport

phosphate transport

locomotory behavior

outer membrane

outer membrane

regulation of bone mineralization

regulation of bone mineralization

inorganic diphosphate transmembrane transporter activity

 
1556113_at -0.439 5.615 -4.709 2.694e-04 0.038 0.628 DKFZp451A211 DKFZp451A211 protein 13   BC036906 13q34 Hs.646609 1    
228093_at 0.443 5.602 4.703 2.730e-04 0.038 0.616 ZNF599 zinc finger protein 599 19 -39940818 AW300140 19q13.11 Hs.590961 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1553873_at -1.421 7.926 -4.702 2.733e-04 0.038 0.615 KLHL34 kelch-like 34 (Drosophila) X -21583529 NM_153270 Xp22.12 Hs.448572 4

protein binding

 
201662_s_at -0.815 7.577 -4.701 2.739e-04 0.038 0.613 ACSL3 acyl-CoA synthetase long-chain family member 3 2 223433975 D89053 2q34-q35 Hs.655772 20

nucleotide binding

magnesium ion binding

fatty-acyl-CoA synthase activity

long-chain-fatty-acid-CoA ligase activity

protein binding

ATP binding

mitochondrion

mitochondrial outer membrane

peroxisome

endoplasmic reticulum

microsome

lipid metabolic process

fatty acid metabolic process

metabolic process

membrane

integral to membrane

ligase activity

Fatty acid metabolism

Metabolic pathways

PPAR signaling pathway

Adipocytokine signaling pathway

202055_at -0.724 8.509 -4.699 2.753e-04 0.038 0.608 KPNA1 karyopherin alpha 1 (importin alpha 5) 3 -123623437 AA652173 3q21 Hs.161008 92

regulation of DNA recombination

protein binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

cytosol

NLS-bearing substrate import into nucleus

intracellular protein transport

nuclear localization sequence binding

protein transporter activity

interspecies interaction between organisms

 
242660_at 0.894 3.258 4.698 2.759e-04 0.038 0.606 C10orf112 chromosome 10 open reading frame 112 10   AA846789 10p12.31 Hs.662505 4

membrane

integral to membrane

 
243439_at 0.646 5.722 4.697 2.760e-04 0.038 0.606 ZNF418 zinc finger protein 418 19 -63125063 AI971569 19q13.43 Hs.660728 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
208950_s_at 0.721 6.530 4.684 2.831e-04 0.039 0.582 ALDH7A1 aldehyde dehydrogenase 7 family, member A1 5 -125906816 BC002515 5q31 Hs.483239 19

aldehyde dehydrogenase (NAD) activity

L-aminoadipate-semialdehyde dehydrogenase activity

cellular_component

mitochondrion

cellular aldehyde metabolic process

sensory perception of sound

oxidoreductase activity

oxidation reduction

Glycolysis / Gluconeogenesis

Ascorbate and aldarate metabolism

Fatty acid metabolism

Valine, leucine and isoleucine degradation

Lysine degradation

Arginine and proline metabolism

Histidine metabolism

Tryptophan metabolism

beta-Alanine metabolism

Glycerolipid metabolism

Pyruvate metabolism

Propanoate metabolism

3-Chloroacrylic acid degradation

Butanoate metabolism

Limonene and pinene degradation

Metabolic pathways

206404_at 1.100 6.003 4.682 2.843e-04 0.039 0.578 FGF9 fibroblast growth factor 9 (glia-activating factor) 13 21143214 NM_002010 13q11-q12 Hs.111 33

angiogenesis

osteoblast differentiation

positive regulation of mesenchymal cell proliferation

chondrocyte differentiation

extracellular region

extracellular region

extracellular space

protein import into nucleus

signal transduction

cell-cell signaling

growth factor activity

heparin binding

male gonad development

negative regulation of Wnt receptor signaling pathway

male sex determination

lung development

embryonic limb morphogenesis

positive regulation of vascular endothelial growth factor receptor signaling pathway

inner ear morphogenesis

positive regulation of MAPKKK cascade

positive regulation of fibroblast growth factor receptor signaling pathway

positive regulation of smoothened signaling pathway

regulation of timing of cell differentiation

embryonic gut development

embryonic skeletal system development

positive regulation of epithelial cell proliferation

positive regulation of cardiac muscle cell proliferation

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

212637_s_at -0.992 8.355 -4.682 2.846e-04 0.039 0.577 WWP1 WW domain containing E3 ubiquitin protein ligase 1 8 87424109 AU155187 8q21 Hs.655189 30

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

intracellular

protein modification process

signal transduction

central nervous system development

negative regulation of transcription

protein ubiquitination

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

interspecies interaction between organisms

entry of virus into host cell

Ubiquitin mediated proteolysis

Endocytosis

217364_x_at -0.728 5.559 -4.681 2.848e-04 0.039 0.577 EIF3J eukaryotic translation initiation factor 3, subunit J 15 42616557 AL031313 15q21.1 Hs.404056 19

translation initiation factor activity

protein binding

cytoplasm

cytosol

eukaryotic translation initiation factor 3 complex

translational initiation

 
204067_at 0.464 7.561 4.680 2.859e-04 0.039 0.573 SUOX sulfite oxidase 12 54677309 AA129776 12q13.2 Hs.558403 23

mitochondrion

mitochondrial intermembrane space

cytosol

response to nutrient

sulfite oxidase activity

electron carrier activity

oxidoreductase activity

heme binding

molybdenum ion binding

molybdopterin cofactor binding

metal ion binding

oxidation reduction

Sulfur metabolism

200978_at 0.484 12.281 4.677 2.873e-04 0.039 0.568 MDH1 malate dehydrogenase 1, NAD (soluble) 2 63669625 NM_005917 2p13.3 Hs.526521 18

malic enzyme activity

binding

soluble fraction

cytoplasm

cytosol

cytosol

glycolysis

tricarboxylic acid cycle

oxaloacetate metabolic process

malate metabolic process

oxidoreductase activity

NAD metabolic process

L-malate dehydrogenase activity

L-malate dehydrogenase activity

cellular carbohydrate metabolic process

NAD or NADH binding

oxidation reduction

Citrate cycle (TCA cycle)

Pyruvate metabolism

Glyoxylate and dicarboxylate metabolism

Carbon fixation in photosynthetic organisms

Reductive carboxylate cycle (CO2 fixation)

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

202823_at -0.723 8.055 -4.671 2.911e-04 0.039 0.556 TCEB1 transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) 8 -75021187 N89607 8q21.11 Hs.554594 46

protein binding

nucleus

nucleoplasm

cytosol

regulation of transcription from RNA polymerase II promoter

ubiquitin-dependent protein catabolic process

interspecies interaction between organisms

regulation of transcription

Ubiquitin mediated proteolysis

Pathways in cancer

Renal cell carcinoma

227163_at 0.500 5.026 4.662 2.959e-04 0.040 0.541 GSTO2 glutathione S-transferase omega 2 10 106018620 AL162742 10q25.1 Hs.203634 27

glutathione transferase activity

cytoplasm

metabolic process

transferase activity

Glutathione metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

224505_s_at -0.602 8.831 -4.651 3.024e-04 0.040 0.521 PLCD4 phospholipase C, delta 4 2 219180875 BC006355 2q35 Hs.632528 19

phosphoinositide phospholipase C activity

signal transducer activity

calcium ion binding

nucleus

cytoplasm

endoplasmic reticulum

intracellular signaling cascade

membrane

lipid catabolic process

hydrolase activity

Inositol phosphate metabolism

Metabolic pathways

Calcium signaling pathway

Phosphatidylinositol signaling system

202919_at -0.592 8.679 -4.650 3.031e-04 0.040 0.519 MOBKL3 MOB1, Mps One Binder kinase activator-like 3 (yeast) 2 198088564, 198089015 NM_015387 2q33.1 Hs.645458 13

protein binding

cytoplasm

Golgi apparatus

transport

zinc ion binding

membrane

metal ion binding

perinuclear region of cytoplasm

 
210246_s_at 0.644 5.357 4.648 3.044e-04 0.040 0.515 ABCC8 ATP-binding cassette, sub-family C (CFTR/MRP), member 8 11 -17371007 AF087138 11p15.1 Hs.54470 111

nucleotide binding

receptor activity

ATP binding

plasma membrane

carbohydrate metabolic process

transport

potassium ion transport

sulfonylurea receptor activity

potassium ion transmembrane transporter activity

integral to membrane

ATPase activity

ATPase activity, coupled to transmembrane movement of substances

ABC transporters

Type II diabetes mellitus

224950_at 0.596 5.209 4.648 3.045e-04 0.040 0.514 PTGFRN prostaglandin F2 receptor negative regulator 1 117254211 BF476250 1p13.1 Hs.418093 14

protein binding

endoplasmic reticulum

Golgi apparatus

membrane

integral to membrane

 
201372_s_at -1.412 5.309 -4.647 3.051e-04 0.040 0.513 CUL3 cullin 3 2 -225043112 NM_003590 2q36.2 Hs.372286 39

G1/S transition of mitotic cell cycle

protein binding

nucleus

Golgi apparatus

ubiquitin-dependent protein catabolic process

cell cycle arrest

cyclin catabolic process

positive regulation of cell proliferation

induction of apoptosis by intracellular signals

cullin-RING ubiquitin ligase complex

ubiquitin protein ligase binding

Ubiquitin mediated proteolysis

208690_s_at 1.077 10.641 4.645 3.061e-04 0.041 0.510 PDLIM1 PDZ and LIM domain 1 10 -96987319 BC000915 10q22-q26.3 Hs.368525 19

transcription coactivator activity

protein binding

transcription factor complex

cytoplasm

cytoskeleton

response to oxidative stress

zinc ion binding

regulation of transcription

metal ion binding

 
228728_at 0.579 9.498 4.643 3.076e-04 0.041 0.505 C7orf58 chromosome 7 open reading frame 58 7 120415986, 120416680 BF724137 7q31.31 Hs.189652 13

endoplasmic reticulum

 
213929_at 0.619 2.932 4.641 3.087e-04 0.041 0.502 EXPH5 exophilin 5 11 -107881367, -107881367, -107881367 AL050204 11q22.3 Hs.28540 8

protein binding

intracellular protein transport

Rab GTPase binding

 
218193_s_at -0.752 5.717 -4.637 3.113e-04 0.041 0.494 GOLT1B golgi transport 1 homolog B (S. cerevisiae) 12 21545965 NM_016072 12p12.1 Hs.62275 10

signal transducer activity

endoplasmic reticulum

Golgi apparatus

protein transport

membrane

integral to membrane

vesicle-mediated transport

positive regulation of I-kappaB kinase/NF-kappaB cascade

 
205210_at -0.371 5.527 -4.631 3.150e-04 0.041 0.483 TGFBRAP1 transforming growth factor, beta receptor associated protein 1 2 -105249973 NM_004257 2q12.1 Hs.446350 7

transforming growth factor beta receptor binding

cytoplasm

signal transduction

transforming growth factor beta receptor signaling pathway

membrane

regulation of transcription

SMAD binding

 
218364_at -0.712 8.099 -4.627 3.176e-04 0.041 0.475 LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 3 -37069120 NM_017724 3p22.2 Hs.719246 7

protein binding

cellular_component

biological_process

Wnt receptor signaling pathway

LRR domain binding

 
234192_s_at -0.724 8.574 -4.626 3.181e-04 0.041 0.474 GKAP1 G kinase anchoring protein 1 9 -85544156 AK026487 9q21.32 Hs.522255 5

protein binding

Golgi apparatus

signal transduction

 
236813_at 0.594 5.600 4.625 3.186e-04 0.041 0.473 MORN4 MORN repeat containing 4 10 -99364299, -99364299 N21659 10q24.2 Hs.217409 6    
1569852_at -1.387 7.982 -4.624 3.197e-04 0.041 0.469 C7orf53 chromosome 7 open reading frame 53 7 111908143, 111908301 BC031976 7q31.1 Hs.396189 5

membrane

integral to membrane

 
212250_at -0.756 7.994 -4.621 3.211e-04 0.041 0.465 MTDH metadherin 8 98725582 AV700332 8q22.1 Hs.377155 23

negative regulation of transcription from RNA polymerase II promoter

protein binding

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

tight junction

membrane

integral to membrane

cell junction

nuclear membrane

perinuclear region of cytoplasm

NF-kappaB binding

positive regulation of NF-kappaB transcription factor activity

 
222628_s_at 0.435 7.225 4.620 3.218e-04 0.041 0.463 REV1 REV1 homolog (S. cerevisiae) 2 -99383369 AA195405 2q11.1-q11.2 Hs.443077 27

magnesium ion binding

damaged DNA binding

DNA-directed DNA polymerase activity

protein binding

intracellular

nucleus

DNA replication

DNA repair

response to DNA damage stimulus

response to UV

transferase activity

deoxycytidyl transferase activity

error-prone postreplication DNA repair

 
227474_at 1.092 5.040 4.615 3.251e-04 0.042 0.454 LOC654433 hypothetical LOC654433 2 113710316 AY007128 2q13 Hs.656660 4    
41577_at 0.615 5.424 4.615 3.254e-04 0.042 0.453 PPP1R16B protein phosphatase 1, regulatory (inhibitor) subunit 16B 20 36867761 AB020630 20q11.23 Hs.45719 7

plasma membrane

signal transduction

protein phosphatase binding

 
203235_at 0.359 6.272 4.614 3.258e-04 0.042 0.452 THOP1 thimet oligopeptidase 1 19 2736505 NM_003249 19q13.3 Hs.78769 24

metalloendopeptidase activity

protein binding

cytoplasm

proteolysis

peptide metabolic process

protein kinase cascade

peptidase activity

zinc ion binding

metal ion binding

Renin-angiotensin system

220610_s_at -0.714 6.899 -4.614 3.258e-04 0.042 0.452 LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 3 -37069120 NM_006309 3p22.2 Hs.719246 7

protein binding

cellular_component

biological_process

Wnt receptor signaling pathway

LRR domain binding

 
203511_s_at 0.519 7.452 4.614 3.261e-04 0.042 0.451 TRAPPC3 trafficking protein particle complex 3 1 -36374759 AF041432 1p34.3 Hs.523131 16

Golgi membrane

protein binding

endoplasmic reticulum

Golgi apparatus

cytosol

ER to Golgi vesicle-mediated transport

vesicle-mediated transport

TRAPP complex

 
200761_s_at -0.605 10.622 -4.610 3.284e-04 0.042 0.444 ARL6IP5 ADP-ribosylation-like factor 6 interacting protein 5 3 69216779 NM_006407 3p14 Hs.518060 Hs.716493 30

protein binding

cytoplasm

endoplasmic reticulum

L-glutamate transport

membrane

integral to membrane

 
222103_at -0.829 8.706 -4.610 3.284e-04 0.042 0.444 ATF1 activating transcription factor 1 12 49444085 AI434345 12q13 Hs.648565 45

transcription factor activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

sequence-specific DNA binding

protein dimerization activity

 
228831_s_at 0.594 6.001 4.607 3.307e-04 0.042 0.438 GNG7 guanine nucleotide binding protein (G protein), gamma 7 19 -2462217 AL039870 19p13.3 Hs.515544 12

behavioral fear response

signal transducer activity

heterotrimeric G-protein complex

plasma membrane

signal transduction

receptor guanylyl cyclase signaling pathway

locomotory behavior

regulation of G-protein coupled receptor protein signaling pathway

hormone-mediated signaling

Chemokine signaling pathway

214889_at 1.571 5.527 4.604 3.323e-04 0.042 0.434 FAM149A family with sequence similarity 149, member A 4 187302988, 187307320 AL080065 4q35.1 Hs.357025 3    
202056_at -0.814 8.604 -4.604 3.323e-04 0.042 0.434 KPNA1 karyopherin alpha 1 (importin alpha 5) 3 -123623437 AW051311 3q21 Hs.161008 92

regulation of DNA recombination

protein binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

cytosol

NLS-bearing substrate import into nucleus

intracellular protein transport

nuclear localization sequence binding

protein transporter activity

interspecies interaction between organisms

 
221058_s_at 0.463 5.747 4.604 3.324e-04 0.042 0.433 CKLF chemokine-like factor 16 65143966, 65143972 NM_016326 16q21 Hs.15159 Hs.710181 12

extracellular region

extracellular space

chemotaxis

chemokine activity

cell proliferation

membrane

integral to membrane

neutrophil chemotaxis

secretion by cell

macrophage chemotaxis

lymphocyte chemotaxis

 
1556121_at -0.954 6.152 -4.602 3.336e-04 0.042 0.430 NAP1L1 nucleosome assembly protein 1-like 1 12 -74724938 AK021751 12q21.2 Hs.524599 Hs.695185 17

protein binding

nucleus

chromatin assembly complex

DNA replication

nucleosome assembly

positive regulation of cell proliferation

melanosome

 
225547_at -0.786 10.993 -4.602 3.336e-04 0.042 0.430 SNHG6 small nucleolar RNA host gene 6 (non-protein coding) 8 -67996718 BG169443 8q13 Hs.372680 1    
205334_at 0.756 8.764 4.601 3.344e-04 0.042 0.428 S100A1 S100 calcium binding protein A1 1 151867496 NM_006271 1q21 Hs.515715 55

calcium ion binding

cytoplasm

intracellular signaling cascade

regulation of heart contraction

zinc ion binding

sarcoplasmic reticulum

protein homodimerization activity

protein complex

S100 beta binding

S100 alpha binding

ATPase binding

 
208913_at -0.663 7.188 -4.599 3.359e-04 0.042 0.423 GGA2 golgi associated, gamma adaptin ear containing, ARF binding protein 2 16 -23383143 AA868560 16p12 Hs.460336 37

protein binding

intracellular

endosome

trans-Golgi network

intracellular protein transport

membrane

vesicle-mediated transport

membrane coat

clathrin adaptor complex

ADP-ribosylation factor binding

Lysosome

201160_s_at -0.350 12.837 -4.597 3.372e-04 0.042 0.420 CSDA cold shock domain protein A 12 -10742944 AL556190 12p13.1 Hs.221889 20

negative regulation of transcription from RNA polymerase II promoter

double-stranded DNA binding

transcription factor activity

RNA polymerase II transcription factor activity

transcription corepressor activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

response to cold

Tight junction

211698_at -0.527 8.884 -4.595 3.383e-04 0.042 0.417 EID1 EP300 interacting inhibitor of differentiation 1 15 46957581 AF349444 15q21.1-q21.2 Hs.255973 Hs.714048 12

negative regulation of transcription from RNA polymerase II promoter

transcription corepressor activity

protein binding

cellular_component

nucleus

cytoplasm

cell cycle

specific transcriptional repressor activity

cell differentiation

histone acetyltransferase regulator activity

histone acetyltransferase binding

regulation of transcription

 
236514_at 0.952 5.262 4.594 3.389e-04 0.042 0.415 ACOT8 acyl-CoA thioesterase 8 20 -43903767 AI885067 20q13.12 Hs.444776 18

carboxylesterase activity

protein binding

peroxisome

lipid metabolic process

acyl-CoA metabolic process

peroxisome organization

acyl-CoA thioesterase activity

hydrolase activity

choloyl-CoA hydrolase activity

interspecies interaction between organisms

 
202289_s_at -0.591 10.658 -4.592 3.408e-04 0.042 0.410 TACC2 transforming, acidic coiled-coil containing protein 2 10 123738678, 123913094 NM_006997 10q26 Hs.501252 Hs.713875 18

protein binding

nucleus

cytoplasm

centrosome

nuclear hormone receptor binding

 
227718_at -0.912 6.497 -4.591 3.412e-04 0.042 0.409 PURB purine-rich element binding protein B 7 -44882416 BF337790 7p13 Hs.349150 Hs.596321 13

translation repressor activity, nucleic acid binding

double-stranded DNA binding

single-stranded DNA binding

transcription factor activity

mRNA binding

nucleus

DNA replication factor A complex

transcription factor binding

specific transcriptional repressor activity

purine-rich negative regulatory element binding

regulation of transcription

regulation of myeloid cell differentiation

negative regulation of transcription, DNA-dependent

SMAD binding

 
236294_at -0.411 5.729 -4.591 3.415e-04 0.042 0.408 HUWE1 HECT, UBA and WWE domain containing 1 X -53575796 R37670 Xp11.22 Hs.136905 28

protein polyubiquitination

DNA binding

ubiquitin-protein ligase activity

protein binding

intracellular

nucleus

nucleolus

cytoplasm

protein modification process

histone ubiquitination

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

cell differentiation

Ubiquitin mediated proteolysis

212293_at -0.760 7.620 -4.587 3.440e-04 0.042 0.401 HIPK1 homeodomain interacting protein kinase 1 1 114273518, 114273518, 114295289, 114298021 BG111260 1p13.2 Hs.532363 11

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

nucleolus

cytoplasm

centrosome

protein amino acid phosphorylation

transferase activity

regulation of transcription

 
223000_s_at 0.611 6.332 4.585 3.454e-04 0.042 0.398 F11R F11 receptor 1 -159231624 AF172398 1q21.2-q21.3 Hs.517293 63

protein binding

plasma membrane

cell-cell junction

tight junction

inflammatory response

cell adhesion

integral to membrane

epithelial cell differentiation

interspecies interaction between organisms

Cell adhesion molecules (CAMs)

Tight junction

Leukocyte transendothelial migration

Epithelial cell signaling in Helicobacter pylori infection

217724_at -0.437 11.090 -4.581 3.483e-04 0.042 0.390 SERBP1 SERPINE1 mRNA binding protein 1 1 -67646080 AF131807 1p31 Hs.719078 22

RNA binding

mRNA 3'-UTR binding

protein binding

nucleus

cytoplasm

regulation of mRNA stability

perinuclear region of cytoplasm

 
225811_at -0.620 9.799 -4.576 3.512e-04 0.042 0.382 C11orf58 chromosome 11 open reading frame 58 11 16716723 AI652868 11p15.1 Hs.719128 8

molecular_function

cellular_component

biological_process

 
228452_at -0.765 6.951 -4.573 3.536e-04 0.042 0.376 C17orf39 chromosome 17 open reading frame 39 17 17883335 AA827865 17p11.2 Hs.187422 5    
208407_s_at 0.572 6.604 4.571 3.554e-04 0.043 0.371 CTNND1 catenin (cadherin-associated protein), delta 1 11 57285809 NM_001331 11q11 Hs.166011 99

protein binding

nucleus

cytoplasm

plasma membrane

Wnt receptor signaling pathway

cell-cell adhesion

cadherin binding

regulation of transcription

Adherens junction

Leukocyte transendothelial migration

214077_x_at 0.628 4.459 4.564 3.599e-04 0.043 0.360 MEIS3P1 Meis homeobox 3 pseudogene 1 17 15630888 H15129 17p12 Hs.356135 4

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

sequence-specific DNA binding

 
219035_s_at -0.689 8.558 -4.564 3.601e-04 0.043 0.359 RNF34 ring finger protein 34 12 120322284 NM_025126 12q24.31 Hs.292804 11

protein binding

nucleus

apoptosis

zinc ion binding

membrane

nuclear speck

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
206303_s_at -0.607 6.900 -4.563 3.609e-04 0.043 0.357 NUDT4 nudix (nucleoside diphosphate linked moiety X)-type motif 4 12 92295831 AF191653 12q21 Hs.506325 10

magnesium ion binding

intracellular

cytoplasm

intracellular signaling cascade

diphosphoinositol-polyphosphate diphosphatase activity

cyclic nucleotide metabolic process

hydrolase activity

calcium-mediated signaling

cyclic-nucleotide-mediated signaling

manganese ion binding

regulation of RNA export from nucleus

intracellular transport

 
203403_s_at -0.855 8.283 -4.562 3.613e-04 0.043 0.356 RNF6 ring finger protein (C3H2C3 type) 6 13 -25684904, -25684904, -25684904 NM_005977 13q12.2 Hs.136885 7

protein binding

cellular_component

biological_process

zinc ion binding

metal ion binding

 
231736_x_at 1.646 6.514 4.561 3.619e-04 0.043 0.354 MGST1 microsomal glutathione S-transferase 1 12 16391342, 16391845, 16391978, 16397617 NM_020300 12p12.3-p12.1 Hs.389700 22

glutathione transferase activity

mitochondrion

mitochondrial outer membrane

mitochondrial inner membrane

endoplasmic reticulum

microsome

glutathione metabolic process

membrane

transferase activity

Glutathione metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

1554679_a_at -2.023 8.658 -4.556 3.663e-04 0.043 0.343 LAPTM4B lysosomal protein transmembrane 4 beta 8 98856984 AF317417 8q22.1 Hs.492314 17

transport

endomembrane system

membrane

integral to membrane

Lysosome

221232_s_at -2.512 9.431 -4.554 3.675e-04 0.043 0.340 ANKRD2 ankyrin repeat domain 2 (stretch responsive muscle) 10 99322245 NM_020349 10q23.31-q23.32 Hs.73708 17

muscle organ development

structural constituent of muscle

I band

 
200992_at -0.389 9.968 -4.551 3.695e-04 0.043 0.335 IPO7 importin 7 11 9362744 AL137335 11p15.4 Hs.718440 22

protein import into nucleus, docking

small GTPase regulator activity

transporter activity

soluble fraction

nucleus

nuclear pore

cytoplasm

intracellular protein transport

signal transduction

Ran GTPase binding

protein transporter activity

histone binding

interspecies interaction between organisms

 
210257_x_at -0.553 4.790 -4.549 3.711e-04 0.043 0.331 CUL4B cullin 4B X -119542473, -119542473 AF212995 Xq23 Hs.102914 28

molecular_function

protein binding

cellular_component

DNA repair

ubiquitin-dependent protein catabolic process

response to DNA damage stimulus

cell cycle

cullin-RING ubiquitin ligase complex

ubiquitin protein ligase binding

Nucleotide excision repair

Ubiquitin mediated proteolysis

205391_x_at 0.601 11.171 4.546 3.733e-04 0.044 0.326 ANK1 ankyrin 1, erythrocytic 8 -41629901, -41629901, -41629900 M28880 8p11.1 Hs.654438 Hs.667377 49

structural constituent of cytoskeleton

cytoplasm

plasma membrane

exocytosis

cytoskeleton organization

signal transduction

cytoskeletal adaptor activity

spectrin-associated cytoskeleton

basolateral plasma membrane

sarcoplasmic reticulum

enzyme binding

spectrin binding

M band

maintenance of epithelial cell apical/basal polarity

 
220416_at 0.489 2.895 4.545 3.744e-04 0.044 0.323 ATP8B4 ATPase, class I, type 8B, member 4 15 -47937726 NM_024837 15q21.2 Hs.511311 7

nucleotide binding

magnesium ion binding

phospholipid-translocating ATPase activity

ATP binding

ATP biosynthetic process

ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism

phospholipid transport

membrane

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

 
222402_at -0.623 7.467 -4.543 3.757e-04 0.044 0.319 POMP proteasome maturation protein 13 28131240 BC003390 13q12.3 Hs.268742 13

nucleus

cytoplasm

cytosol

immune response

protein complex

Proteasome

227031_at -0.647 7.445 -4.536 3.806e-04 0.044 0.307 SNX13 sorting nexin 13 7 -17796910 AV681975 7p21.1 Hs.487648 10

signal transducer activity

protein binding

cell communication

negative regulation of signal transduction

protein transport

phosphoinositide binding

 
221838_at 0.397 4.960 4.536 3.813e-04 0.044 0.306 KLHL22 kelch-like 22 (Drosophila) 22 -19125805 N38751 22q11.21 Hs.517419 6

protein binding

 
201724_s_at -0.460 6.968 -4.535 3.815e-04 0.044 0.305 GALNT1 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) 18 31488530 NM_020474 18q12.1 Hs.514806 26

polypeptide N-acetylgalactosaminyltransferase activity

calcium ion binding

sugar binding

extracellular region

Golgi apparatus

membrane

integral to membrane

transferase activity, transferring glycosyl groups

protein amino acid O-linked glycosylation via serine

protein amino acid O-linked glycosylation via threonine

manganese ion binding

perinuclear region of cytoplasm

O-Glycan biosynthesis

Metabolic pathways

202985_s_at -0.453 6.914 -4.532 3.843e-04 0.044 0.298 BAG5 BCL2-associated athanogene 5 14 -103092641, -103092641, -103092641 NM_004873 14q32.33 Hs.5443 10

protein binding

protein folding

apoptosis

 
212428_at -0.730 9.043 -4.531 3.851e-04 0.044 0.296 KIAA0368 KIAA0368 9 -113162793 AW001101 9q31.3 Hs.368255 12

proteasome complex

binding

nucleus

early endosome

late endosome

endoplasmic reticulum

ER-Golgi intermediate compartment

trans-Golgi network

centrosome

cytosol

cytoplasmic membrane-bounded vesicle

ER to Golgi transport vesicle

ER-associated protein catabolic process

 
219330_at 0.432 4.051 4.530 3.859e-04 0.044 0.295 VANGL1 vang-like 1 (van gogh, Drosophila) 1 115986096 NM_024062 1p11-p13.1 Hs.515130 12

protein binding

multicellular organismal development

membrane

integral to membrane

Wnt signaling pathway

218534_s_at -0.674 6.554 -4.527 3.878e-04 0.044 0.290 AGGF1 angiogenic factor with G patch and FHA domains 1 5 76361987 NM_018046 5q13.3 Hs.634849 12

vasculogenesis

positive regulation of endothelial cell proliferation

nucleic acid binding

protein binding

extracellular region

intracellular

cytoplasm

RNA processing

cell adhesion

multicellular organismal development

eukaryotic cell surface binding

positive regulation of angiogenesis

perinuclear region of cytoplasm

 
226395_at -0.861 7.792 -4.524 3.904e-04 0.044 0.284 HOOK3 hook homolog 3 (Drosophila) 8 42871189 AI912618 8p11.21 Hs.162852 13

cytoplasm

Golgi apparatus

cis-Golgi network

cytoskeleton

microtubule

endosome organization

lysosome organization

microtubule binding

endosome to lysosome transport

protein transport

HOPS complex

cytoplasmic microtubule organization

identical protein binding

early endosome to late endosome transport

Golgi localization

FHF complex

 
205771_s_at -1.158 7.942 -4.520 3.937e-04 0.045 0.276 AKAP7 A kinase (PRKA) anchor protein 7 6 131508153, 131613196 AL137063 6q23 Hs.486483 9

catalytic activity

intracellular

cytoplasm

cytosol

plasma membrane

ion transport

intracellular signaling cascade

protein localization

biological_process

RNA metabolic process

apical plasma membrane

lateral plasma membrane

protein kinase A binding

protein kinase A binding

 
239093_at 0.674 4.587 4.519 3.944e-04 0.045 0.274 DHDPSL dihydrodipicolinate synthase-like, mitochondrial 10 99334091 BG165743 10q24.2 Hs.180346 4

mitochondrion

metabolic process

lyase activity

 
235122_at 0.704 4.554 4.508 4.029e-04 0.045 0.255 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 1 -41748270 AI800713 1p34 Hs.648369 Hs.715958 12

DNA binding

intracellular

nucleus

cytoplasm

zinc ion binding

transcription activator activity

positive regulation of transcription

metal ion binding

 
1553286_at 0.685 4.888 4.503 4.066e-04 0.046 0.246 ZNF555 zinc finger protein 555 19 2792481 NM_152791 19p13.3 Hs.47712 7

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
49329_at 0.334 6.655 4.503 4.073e-04 0.046 0.245 KLHL22 kelch-like 22 (Drosophila) 22 -19125805 N38751 22q11.21 Hs.517419 6

protein binding

 
230055_at 0.489 5.283 4.502 4.074e-04 0.046 0.244 KHDC1 KH homology domain containing 1 6 -74007758 AL037414 6q13 Hs.715645 4

RNA binding

membrane

integral to membrane

 
223693_s_at 0.410 5.902 4.501 4.088e-04 0.046 0.241 RADIL Ras association and DIL domains 7 -4805265 AL136731 7p22.1 Hs.667336 13

protein binding

cell adhesion

signal transduction

multicellular organismal development

 
224666_at 0.441 7.798 4.500 4.094e-04 0.046 0.240 NSMCE1 non-SMC element 1 homolog (S. cerevisiae) 16 -27143815 AF161451 16p12.1 Hs.284295 6

nucleus

DNA repair

DNA recombination

response to DNA damage stimulus

zinc ion binding

metal ion binding

 
228501_at 0.819 5.727 4.499 4.104e-04 0.046 0.237 GALNTL2 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2 3 16191187 BF055343 3p25.1 Hs.411308 10

polypeptide N-acetylgalactosaminyltransferase activity

calcium ion binding

sugar binding

Golgi apparatus

membrane

integral to membrane

transferase activity, transferring glycosyl groups

transport vesicle

manganese ion binding

O-Glycan biosynthesis

Metabolic pathways

212915_at -1.048 9.177 -4.497 4.116e-04 0.046 0.235 PDZRN3 PDZ domain containing ring finger 3 3 -73514341 AL569804 3p13 Hs.719126 9

protein binding

zinc ion binding

metal ion binding

 
226247_at -0.616 7.755 -4.492 4.163e-04 0.046 0.224 PLEKHA1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 10 124124209, 124141832 AI346026 10q26.13 Hs.643512 16

phospholipid binding

cellular_component

nucleus

cytoplasm

plasma membrane

biological_process

 
202946_s_at -0.731 7.012 -4.491 4.172e-04 0.046 0.222 BTBD3 BTB (POZ) domain containing 3 20 11819476, 11846564 NM_014962 20p12.2 Hs.709366 5

protein binding

 
228483_s_at -0.807 4.947 -4.491 4.172e-04 0.046 0.222 TAF9B TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa X -77271900, 1383006 BE856250 Xq13.1-q21.1 Hs.592248 Hs.643614 Hs.714006 8

DNA binding

transcription corepressor activity

protein binding

nucleus

transcription factor TFIID complex

transcription initiation

negative regulation of specific transcription from RNA polymerase II promoter

positive regulation of cell growth

transcription factor TFTC complex

negative regulation of apoptosis

regulation of transcription

Basal transcription factors

212168_at -0.500 5.686 -4.487 4.206e-04 0.046 0.215 RBM12 RNA binding motif protein 12 20 -33700292 AL514547 20q11.21 Hs.246413 13

nucleotide binding

RNA binding

protein binding

nucleus

 
225007_at -0.527 7.564 -4.484 4.229e-04 0.046 0.210 G3BP1 GTPase activating protein (SH3 domain) binding protein 1 5 151131668 AV705516 5q33.1 Hs.587054 27

nucleotide binding

DNA binding

RNA binding

ATP-dependent DNA helicase activity

ATP-dependent RNA helicase activity

helicase activity

endonuclease activity

protein binding

ATP binding

intracellular

nucleus

cytoplasm

cytosol

plasma membrane

transport

Ras protein signal transduction

hydrolase activity

 
243617_at 0.481 6.123 4.484 4.232e-04 0.046 0.209 ZNF827 zinc finger protein 827 4 -146901337 BF678830 4q31.21-q31.22 Hs.133916 Hs.633543 7

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
208667_s_at -0.686 10.144 -4.483 4.236e-04 0.046 0.208 ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) 22 -39550546 U17714 22q13.2 Hs.712713 29

binding

cytoplasm

protein folding

protein binding, bridging

 
228790_at -0.835 6.461 -4.481 4.253e-04 0.046 0.204 FAM110B family with sequence similarity 110, member B 8 59069666 AW264082 8q12.1 Hs.154652 7

cytoplasm

mitochondrion

centrosome

 
209242_at 0.935 4.967 4.481 4.257e-04 0.046 0.203 PEG3 paternally expressed 3 19 -62013256, -62013256 AL042588 19q13.4 Hs.719209 18

nucleic acid binding

transcription factor activity

intracellular

nucleus

cytoplasm

regulation of transcription, DNA-dependent

apoptosis

zinc ion binding

metal ion binding

 
218150_at -0.521 9.360 -4.477 4.285e-04 0.046 0.197 ARL5A ADP-ribosylation factor-like 5A 2 -152365725 NM_012097 2q23.3 Hs.470233 6

nucleotide binding

GTP binding

intracellular

small GTPase mediated signal transduction

 
213754_s_at -0.651 9.031 -4.476 4.297e-04 0.046 0.195 PAIP1 poly(A) binding protein interacting protein 1 5 -43562126, -43562126 AW613203 5p12 Hs.482038 12

RNA binding

protein binding

cytoplasm

translational initiation

regulation of translation

translation activator activity

RNA metabolic process

mRNA stabilization

 
210691_s_at -0.502 8.089 -4.475 4.304e-04 0.046 0.193 CACYBP calcyclin binding protein 1 173235193, 173235514 AF275803 1q24-q25 Hs.508524 15

protein binding

nucleus

cytoplasm

modification-dependent protein catabolic process

Wnt signaling pathway

236635_at 0.913 4.890 4.475 4.310e-04 0.046 0.192 ZNF667 zinc finger protein 667 19 -61643017 AI332774 19q13.43 Hs.712574 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
238844_s_at -0.842 5.808 -4.472 4.328e-04 0.046 0.188 NPHP1 nephronophthisis 1 (juvenile) 2 -110238202 BF216535 2q13 Hs.280388 36

structural molecule activity

protein binding

adherens junction

signal transduction

excretion

visual behavior

membrane

cell-cell adhesion

actin cytoskeleton organization

cell junction

 
202057_at -0.692 7.254 -4.471 4.343e-04 0.046 0.185 KPNA1 karyopherin alpha 1 (importin alpha 5) 3 -123623437 BC002374 3q21 Hs.161008 92

regulation of DNA recombination

protein binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

cytosol

NLS-bearing substrate import into nucleus

intracellular protein transport

nuclear localization sequence binding

protein transporter activity

interspecies interaction between organisms

 
228372_at 0.502 6.539 4.470 4.350e-04 0.046 0.183 C10orf128 chromosome 10 open reading frame 128 10 -50033896 AW204712 10q11.23 Hs.385493 1

membrane

integral to membrane

 
231560_at -0.483 2.546 -4.470 4.351e-04 0.046 0.183 LRRC34 leucine rich repeat containing 34 3 -170993957 D59759 3q26.2 Hs.591289 3    
1556601_a_at 0.391 4.468 4.468 4.366e-04 0.046 0.180 SPATA13 spermatogenesis associated 13 13 23632886 R69077 13q12.12 Hs.657121 7

Rho guanyl-nucleotide exchange factor activity

intracellular

regulation of Rho protein signal transduction

 
1554678_s_at -0.475 8.367 -4.467 4.372e-04 0.046 0.179 HNRPDL heterogeneous nuclear ribonucleoprotein D-like 4 -83563370 AB066484 4q13-q21 Hs.527105 14

nucleotide binding

DNA binding

double-stranded DNA binding

single-stranded DNA binding

RNA binding

protein binding

nucleus

cytoplasm

RNA processing

poly(A) RNA binding

heterogeneous nuclear ribonucleoprotein complex

regulation of transcription

 
228749_at -0.579 6.300 -4.467 4.380e-04 0.046 0.177 ZDBF2 zinc finger, DBF-type containing 2 2 206847767 AV734793 2q33.3 Hs.110489 3

nucleic acid binding

zinc ion binding

metal ion binding

 
201361_at -0.416 7.562 -4.463 4.410e-04 0.046 0.171 TMEM109 transmembrane protein 109 11 60437946 NM_024092 11q12.2 Hs.13662 5

molecular_function

cellular_component

nucleus

nucleolus

cytoplasm

biological_process

membrane

integral to membrane

sarcoplasmic reticulum

nuclear membrane

 
241827_at 0.609 6.408 4.463 4.412e-04 0.046 0.170 ZNF615 zinc finger protein 615 19 -57186399 AL577866 19q13.41 Hs.368355 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
244552_at 0.335 3.580 4.461 4.425e-04 0.046 0.167 ZNF788 zinc finger family member 788 19 12064077 AI190287 19p13.2 Hs.127473  

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
209619_at 0.854 7.841 4.455 4.484e-04 0.047 0.155 CD74 CD74 molecule, major histocompatibility complex, class II invariant chain 5 -149761394, -149761392 K01144 5q32 Hs.436568 58

prostaglandin biosynthetic process

intracellular

protein complex assembly

intracellular protein transport

immune response

signal transduction

cell proliferation

membrane

integral to membrane

immunoglobulin mediated immune response

antigen processing and presentation of endogenous antigen

cytokine binding

MHC class II protein binding

identical protein binding

regulation of macrophage activation

negative regulation of apoptosis

T cell selection

Antigen processing and presentation

222471_s_at -0.672 9.130 -4.454 4.494e-04 0.047 0.153 KCMF1 potassium channel modulatory factor 1 2 85051741 AI743396 2p11.2 Hs.654968 7

intracellular

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
222235_s_at -0.676 6.103 -4.454 4.496e-04 0.047 0.153 CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 10 42953939 AL139812 10q11.21 Hs.657569 6

protein binding

Golgi apparatus

membrane

integral to membrane

transferase activity

integral to Golgi membrane

Golgi cisterna membrane

metal ion binding

glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity

dermatan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process

chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process

Chondroitin sulfate biosynthesis

Metabolic pathways

214030_at -0.425 7.447 -4.452 4.511e-04 0.047 0.150 CRYBG3 beta-gamma crystallin domain containing 3 3 99078508 BE501352 3q11.2 Hs.714457 2

sugar binding

 
228555_at -0.556 6.532 -4.448 4.544e-04 0.047 0.143 CAMK2D calcium/calmodulin-dependent protein kinase II delta 4 -114597792, -114591638 AA029441 4q26 Hs.144114 29

G1/S transition of mitotic cell cycle

nucleotide binding

regulation of cell growth

calmodulin-dependent protein kinase activity

calmodulin binding

ATP binding

nucleus

cytoplasm

calcium- and calmodulin-dependent protein kinase complex

calcium ion transport

transferase activity

T-tubule

protein amino acid autophosphorylation

cardiac muscle contraction

ErbB signaling pathway

Calcium signaling pathway

Wnt signaling pathway

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

GnRH signaling pathway

Melanogenesis

Glioma

212567_s_at -0.494 8.340 -4.445 4.571e-04 0.047 0.137 MAP4 microtubule-associated protein 4 3 -47989573, -47867183, -47867183 AL523310 3p21 Hs.517949 40

structural molecule activity

protein binding

microtubule

microtubule associated complex

negative regulation of microtubule depolymerization

 
208951_at 0.785 6.233 4.445 4.574e-04 0.047 0.137 ALDH7A1 aldehyde dehydrogenase 7 family, member A1 5 -125906816 BC002515 5q31 Hs.483239 19

aldehyde dehydrogenase (NAD) activity

L-aminoadipate-semialdehyde dehydrogenase activity

cellular_component

mitochondrion

cellular aldehyde metabolic process

sensory perception of sound

oxidoreductase activity

oxidation reduction

Glycolysis / Gluconeogenesis

Ascorbate and aldarate metabolism

Fatty acid metabolism

Valine, leucine and isoleucine degradation

Lysine degradation

Arginine and proline metabolism

Histidine metabolism

Tryptophan metabolism

beta-Alanine metabolism

Glycerolipid metabolism

Pyruvate metabolism

Propanoate metabolism

3-Chloroacrylic acid degradation

Butanoate metabolism

Limonene and pinene degradation

Metabolic pathways

226573_at 1.067 5.920 4.444 4.579e-04 0.047 0.136 DIRAS1 DIRAS family, GTP-binding RAS-like 1 19 -2665564 AI829795 19p13.3 Hs.172753 6

nucleotide binding

GTP binding

intracellular

plasma membrane

small GTPase mediated signal transduction

 
231940_at 0.665 6.712 4.444 4.584e-04 0.047 0.135 ZNF529 zinc finger protein 529 19 -41762996, -41726357, -41726357 AI369933 19q13.13 Hs.708146 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
215716_s_at -0.628 7.194 -4.443 4.595e-04 0.047 0.133 ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 12 -88505956 L14561 12q21.3 Hs.506276 38

nucleotide binding

magnesium ion binding

calcium-transporting ATPase activity

calcium ion binding

calmodulin binding

ATP binding

plasma membrane

integral to plasma membrane

ATP biosynthetic process

cation transport

calcium ion transport

metabolic process

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

Calcium signaling pathway

229139_at -1.029 10.879 -4.441 4.613e-04 0.047 0.129 JPH1 junctophilin 1 8 -75309492 AI202201 8q21 Hs.657367 9

molecular_function

microsome

plasma membrane

muscle organ development

structural constituent of muscle

junctional sarcoplasmic reticulum membrane

integral to membrane

sarcoplasmic reticulum

Z disc

junctional membrane complex

regulation of ryanodine-sensitive calcium-release channel activity

calcium ion transport into cytosol

 
207537_at -1.197 7.178 -4.440 4.616e-04 0.047 0.128 PFKFB1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 X -54976314 NM_002625 Xp11.21 Hs.444304 11

nucleotide binding

6-phosphofructo-2-kinase activity

6-phosphofructo-2-kinase activity

fructose-2,6-bisphosphate 2-phosphatase activity

fructose-2,6-bisphosphate 2-phosphatase activity

ATP binding

cytosol

fructose 2,6-bisphosphate metabolic process

gluconeogenesis

glycolysis

protein kinase cascade

metabolic process

kinase activity

transferase activity

hydrolase activity

identical protein binding

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 complex

Fructose and mannose metabolism

203557_s_at 0.592 7.550 4.437 4.644e-04 0.047 0.123 PCBD1 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha 10 -72313272 NM_000281 10q22 Hs.3192 28

transcription coactivator activity

phenylalanine 4-monooxygenase activity

nucleus

cytoplasm

tetrahydrobiopterin biosynthetic process

4-alpha-hydroxytetrahydrobiopterin dehydratase activity

lyase activity

identical protein binding

regulation of protein homodimerization activity

positive regulation of transcription

protein homotetramerization

protein heterooligomerization

 
228908_s_at 0.385 5.000 4.437 4.652e-04 0.047 0.121 LOC642852 hypothetical LOC642852 21 45532394 AW131553 21q22.3 Hs.11637 Hs.676029 Hs.710382 2    
238315_s_at 0.597 3.990 4.431 4.702e-04 0.048 0.111 ZNF567 zinc finger protein 567 19 41872141 BF061829 19q13.12 Hs.412517 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
213541_s_at 0.495 5.211 4.431 4.707e-04 0.048 0.110 ERG v-ets erythroblastosis virus E26 oncogene homolog (avian) 21 -38673821, -38673821 AI351043 21q22.3 Hs.473819 66

transcription factor activity

signal transducer activity

protein binding

nucleus

regulation of transcription, DNA-dependent

protein amino acid phosphorylation

signal transduction

multicellular organismal development

cell proliferation

sequence-specific DNA binding

 
235554_x_at -0.714 4.814 -4.427 4.738e-04 0.048 0.104 PACRGL PARK2 co-regulated-like 4 20311133 BE048198 4p15.31 Hs.479298 5

binding

 
1555630_a_at 0.493 6.032 4.426 4.753e-04 0.048 0.101 RAB34 RAB34, member RAS oncogene family 17 -24065425, -24065425, -24065425 AF327350 17q11.2 Hs.301853 16

nucleotide binding

ruffle

GTPase activity

GTP binding

cytoplasm

early endosome

Golgi apparatus

endocytosis

small GTPase mediated signal transduction

protein transport

guanyl nucleotide binding

 
202376_at 1.195 5.401 4.419 4.816e-04 0.048 0.089 SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 14 94148466 NM_001085 14q32.1 Hs.534293 Hs.710488 134

DNA binding

serine-type endopeptidase inhibitor activity

protein binding

extracellular region

intracellular

nucleus

acute-phase response

inflammatory response

regulation of lipid metabolic process

peptidase inhibitor activity

 
228342_s_at -1.131 8.465 -4.419 4.820e-04 0.048 0.088 ALPK3 alpha-kinase 3 15 83160914 AA843297 15q25.2 Hs.459183 5

protein serine/threonine kinase activity

ATP binding

nucleus

protein amino acid phosphorylation

multicellular organismal development

heart development

kinase activity

transferase activity

 
35147_at 0.582 6.873 4.418 4.826e-04 0.048 0.087 MCF2L MCF.2 cell line derived transforming sequence-like 13 112670757, 112681655 AB002360 13q34 Hs.170422 Hs.597691 15

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

intracellular

cytoplasm

mitochondrion

plasma membrane

intracellular signaling cascade

regulation of Rho protein signal transduction

 
214959_s_at -0.643 4.404 -4.417 4.840e-04 0.048 0.084 API5 apoptosis inhibitor 5 11 43290080 AF229253 11p11.2 Hs.435771 15

binding

nucleus

spliceosomal complex

cytoplasm

apoptosis

anti-apoptosis

anti-apoptosis

anti-apoptosis

fibroblast growth factor binding

 
206204_at 1.568 5.316 4.416 4.846e-04 0.048 0.083 GRB14 growth factor receptor-bound protein 14 2 -165057568 NM_004490 2q22-q24 Hs.411881 19

SH3/SH2 adaptor activity

protein binding

cytoplasm

endosome

microsome

Golgi apparatus

plasma membrane

signal transduction

 
231056_at 0.441 5.900 4.410 4.910e-04 0.049 0.071 LOC339352 similar to Putative ATP-binding domain-containing protein 3-like protein 19   AI479923 19q13.41        
1555363_s_at 0.351 5.734 4.409 4.917e-04 0.049 0.070 LOC284440 hypothetical LOC284440 19 -19728182 BC034236 19p13.11 Hs.665307 4    
218310_at -0.543 7.602 -4.409 4.922e-04 0.049 0.069 RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 7 65843077 NM_014504 7q11.21 Hs.530053 20

DNA binding

protein binding

cytoplasm

early endosome

endocytosis

zinc ion binding

protein transport

modification-dependent protein catabolic process

metal ion binding

recycling endosome

 
1552734_at -0.354 3.951 -4.400 5.004e-04 0.049 0.053 RICTOR RPTOR independent companion of MTOR, complex 2 5 -38973779 NM_152756 5p13.1 Hs.407926 21

guanyl-nucleotide exchange factor activity

protein binding

intracellular

embryonic development

positive regulation of actin filament polymerization

actin cytoskeleton reorganization

TORC2 complex

positive regulation of TOR signaling pathway

regulation of Rac GTPase activity

regulation of actin cytoskeleton organization

positive regulation of peptidyl-tyrosine phosphorylation

regulation of small GTPase mediated signal transduction

regulation of protein kinase B signaling cascade

mTOR signaling pathway

201601_x_at 0.827 9.171 4.398 5.024e-04 0.049 0.050 IFITM1 interferon induced transmembrane protein 1 (9-27) 11 303990 NM_003641 11p15.5 Hs.458414 16

receptor signaling protein activity

protein binding

plasma membrane

cell surface receptor linked signal transduction

negative regulation of cell proliferation

response to biotic stimulus

integral to membrane

B cell receptor signaling pathway

228561_at -0.970 6.687 -4.396 5.051e-04 0.049 0.045 CDC37L1 cell division cycle 37 homolog (S. cerevisiae)-like 1 9 4669565 BF510563 9p24.1 Hs.561954 6

protein binding

cytoplasm

 
222478_at -0.502 7.940 -4.395 5.057e-04 0.049 0.043 VPS36 vacuolar protein sorting 36 homolog (S. cerevisiae) 13 -51884737 AL576924 13q14.3 Hs.109520 11

nucleus

cytoplasm

lysosome

late endosome

lipid binding

protein transport

ubiquitin binding

regulation of transcription

Endocytosis

221645_s_at 0.822 4.360 4.395 5.059e-04 0.049 0.043 ZNF83 zinc finger protein 83 19 -57807429, -57807429 M27877 19q13.3 Hs.467210 Hs.655934 Hs.659798 Hs.710125 9

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
207757_at 0.568 4.480 4.394 5.066e-04 0.049 0.042 ZFP2 zinc finger protein 2 homolog (mouse) 5 178255521 NM_030613 5q35.3 Hs.654533 1

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
200911_s_at 0.429 8.684 4.394 5.069e-04 0.049 0.041 TACC1 transforming, acidic coiled-coil containing protein 1 8 38704860, 38763878 NM_006283 8p11.22 Hs.279245 22

protein binding

nucleus

cytoplasm

cell cycle

cell division

 
238547_at -0.760 6.457 -4.393 5.081e-04 0.049 0.039 HEXIM2 hexamthylene bis-acetamide inducible 2 17 40594046 AI972367 17q21.31 Hs.56382 9

negative regulation of transcription from RNA polymerase II promoter

cyclin-dependent protein kinase inhibitor activity

protein binding

nucleus

cytoplasm

transcription repressor activity

snRNA binding

regulation of transcription

negative regulation of cyclin-dependent protein kinase activity

 
225894_at -0.619 11.477 -4.393 5.084e-04 0.049 0.038 SYNPO2 synaptopodin 2 4 120029443, 120029443 AL589603 4q26 Hs.655519 14

actin binding

protein binding

nucleus

cytoplasm

 
231045_x_at -0.403 8.514 -4.392 5.090e-04 0.049 0.037 C11orf31 chromosome 11 open reading frame 31 11 57265297 H29876 11q12.1 Hs.655373 Hs.719147 6

selenium binding

cell redox homeostasis

 
236565_s_at 1.730 6.053 4.392 5.092e-04 0.049 0.037 LARP6 La ribonucleoprotein domain family, member 6 15 -68930821, -68910942 BF792126 15q23 Hs.416755 5

RNA binding

nucleus

cytoplasm

RNA processing

ribonucleoprotein complex

 
225701_at 0.483 5.259 4.388 5.127e-04 0.049 0.031 AKNA AT-hook transcription factor 9 -116136254 AK024431 9q32 Hs.494895 5

DNA binding

nucleus

regulation of transcription

 
225790_at -0.867 7.260 -4.386 5.151e-04 0.049 0.026 MSRB3 methionine sulfoxide reductase B3 12 63958754 AL048386 12q14.3 Hs.339024 6

mitochondrion

endoplasmic reticulum

peptide-methionine-(S)-S-oxide reductase activity

zinc ion binding

oxidoreductase activity

metal ion binding

oxidation reduction

 
212678_at -0.416 5.639 -4.385 5.160e-04 0.049 0.025 NF1 neurofibromin 1 17 26446120, 26446120 AW054826 17q11.2 Hs.113577 204

osteoblast differentiation

metanephros development

response to hypoxia

liver development

negative regulation of endothelial cell proliferation

regulation of cell-matrix adhesion

Ras GTPase activator activity

protein binding

intracellular

nucleus

cytoplasm

signal transduction

Ras protein signal transduction

negative regulation of neuroblast proliferation

brain development

peripheral nervous system development

heart development

visual learning

phosphoinositide 3-kinase cascade

spinal cord development

forebrain astrocyte development

cerebral cortex development

myelination in the peripheral nervous system

actin cytoskeleton organization

collagen fibril organization

adrenal gland development

negative regulation of cell migration

axon

dendrite

positive regulation of Ras GTPase activity

wound healing

negative regulation of transcription factor import into nucleus

negative regulation of MAP kinase activity

negative regulation of MAPKKK cascade

pigmentation

positive regulation of neuron apoptosis

regulation of blood vessel endothelial cell migration

regulation of bone resorption

regulation of glial cell differentiation

positive regulation of adenylate cyclase activity

regulation of angiogenesis

sympathetic nervous system development

camera-type eye morphogenesis

negative regulation of oligodendrocyte differentiation

smooth muscle tissue development

artery morphogenesis

forebrain morphogenesis

cognition

regulation of small GTPase mediated signal transduction

MAPK signaling pathway

204821_at 0.624 4.520 4.385 5.165e-04 0.049 0.024 BTN3A3 butyrophilin, subfamily 3, member A3 6 26548741 NM_006994 6p21.3 Hs.167741 9

membrane

integral to membrane

 
228608_at 0.694 3.211 4.384 5.173e-04 0.049 0.022 NALCN sodium leak channel, non-selective 13 -100504130 N49852 13q32.3 Hs.525146 8

voltage-gated ion channel activity

sodium channel activity

ion transport

sodium ion transport

membrane

integral to membrane

sodium ion binding

 
202128_at -0.578 6.577 -4.379 5.227e-04 0.049 0.013 KIAA0317 KIAA0317 14 -74197707 NM_014821 14q24.3 Hs.497417 4

intracellular

protein modification process

membrane

integral to membrane

acid-amino acid ligase activity

modification-dependent protein catabolic process

 
235910_x_at 0.487 4.300 4.378 5.238e-04 0.049 0.011 ZNF316 zinc finger protein 316 7   BE674951 7p22.1 Hs.112668 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
233825_s_at -0.823 7.468 -4.377 5.242e-04 0.049 0.010 CD99L2 CD99 molecule-like 2 X -149685466 AU158444 Xq28 Hs.522805 8

protein binding

plasma membrane

cell adhesion

integral to membrane

cell junction

 
225568_at 0.357 7.284 4.375 5.262e-04 0.049 0.006 TMEM141 transmembrane protein 141 9 138805597 BE728983 9q34.3 Hs.356744 4

membrane

integral to membrane

 
1559965_at -0.622 5.394 -4.375 5.263e-04 0.049 0.006 LOC100192378 hypothetical LOC100192378 8 -77685669 BC037827 8q21.11 Hs.648649 2    
200973_s_at -0.871 9.408 -4.375 5.268e-04 0.049 0.005 TSPAN3 tetraspanin 3 15 -75125385 NM_005724 15q24.3 Hs.5062 Hs.716484 8

membrane

integral to membrane

 
202824_s_at -0.375 10.120 -4.375 5.269e-04 0.049 0.005 TCEB1 transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) 8 -75021187 NM_005648 8q21.11 Hs.554594 46

protein binding

nucleus

nucleoplasm

cytosol

regulation of transcription from RNA polymerase II promoter

ubiquitin-dependent protein catabolic process

interspecies interaction between organisms

regulation of transcription

Ubiquitin mediated proteolysis

Pathways in cancer

Renal cell carcinoma

213236_at 0.541 6.980 4.375 5.270e-04 0.049 0.005 SASH1 SAM and SH3 domain containing 1 6 148705421 AK025495 6q24.3 Hs.193133 12

protein binding

 
209683_at -0.631 5.220 -4.375 5.271e-04 0.049 0.005 FAM49A family with sequence similarity 49, member A 2 -16597381 AA243659 2p24.2 Hs.467769 8

intracellular

 
201980_s_at 0.699 6.760 4.374 5.278e-04 0.049 0.004 RSU1 Ras suppressor protein 1 10 -16672622 NM_012425 10p13 Hs.524161 17

protein binding

signal transduction

 
204773_at 0.329 7.128 4.373 5.293e-04 0.049 0.001 IL11RA interleukin 11 receptor, alpha 9 34642181, 34643931, 34643931 NM_004512 9p13 Hs.591088 26

cytokine receptor activity

integral to plasma membrane

membrane

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

Hematopoietic cell lineage

224791_at 0.637 6.646 4.371 5.313e-04 0.050 -0.003 ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 8 -131133534 AW513835 8q24.1-q24.2 Hs.655552 19

protein binding

cytoplasm

ARF GTPase activator activity

zinc ion binding

membrane

regulation of ARF GTPase activity

metal ion binding

Endocytosis

Fc gamma R-mediated phagocytosis

222543_at -0.704 7.526 -4.364 5.389e-04 0.050 -0.016 DERL1 Der1-like domain family, member 1 8 -124094748 AF131854 8q24.13 Hs.241576 28

receptor activity

protein binding

endoplasmic reticulum

endoplasmic reticulum

response to unfolded protein

protein transport

membrane

integral to membrane

intracellular transport of viral proteins in host cell

integral to endoplasmic reticulum membrane

ER-associated protein catabolic process

endoplasmic reticulum unfolded protein response

retrograde protein transport, ER to cytosol

MHC class I protein binding

interspecies interaction between organisms

Amyotrophic lateral sclerosis (ALS)

228953_at -0.698 6.967 -4.363 5.395e-04 0.050 -0.017 WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules 15 81275026 AI023634 15q25.2 Hs.377360 5

actin binding

cytoplasm

ER-Golgi intermediate compartment

Golgi apparatus

membrane

cytoplasmic vesicle membrane

cytoplasmic vesicle

 
215119_at 1.556 5.238 4.363 5.401e-04 0.050 -0.018 MYO16 myosin XVI 13 108046500 AI522028 13q33.3 Hs.656587 7

nucleotide binding

motor activity

ATP binding

nucleoplasm

cytoplasm

plasma membrane

negative regulation of cell proliferation

myosin complex

cerebellum development

negative regulation of S phase of mitotic cell cycle

perinuclear region of cytoplasm

actin filament binding

 
207996_s_at -1.095 6.652 -4.360 5.431e-04 0.050 -0.023 C18orf1 chromosome 18 open reading frame 1 18 13208785, 13601664, 13610866 NM_004338 18p11.2 Hs.149363 9

molecular_function

plasma membrane

biological_process

integral to membrane

 
227100_at -0.669 5.464 -4.360 5.435e-04 0.050 -0.024 B3GALTL beta 1,3-galactosyltransferase-like 13 30672111 AI569766 13q12.3 Hs.13205 11

endoplasmic reticulum

carbohydrate metabolic process

fucose metabolic process

membrane

integral to membrane

transferase activity, transferring glycosyl groups

 
217977_at 0.839 9.379 4.359 5.441e-04 0.050 -0.025 SEPX1 selenoprotein X, 1 16 -1928234 NM_016332 16p13.3 Hs.655346 11

protein-methionine-R-oxide reductase activity

cellular_component

nucleus

cytoplasm

peptide-methionine-(S)-S-oxide reductase activity

zinc ion binding

selenium binding

oxidoreductase activity

protein repair

metal ion binding

oxidation reduction

 
201471_s_at -0.458 9.615 -4.358 5.450e-04 0.050 -0.026 SQSTM1 sequestosome 1 5 179165993, 179166608, 179180447 NM_003900 5q35 Hs.437277 100

protein kinase C binding

protein binding

nucleus

cytoplasm

late endosome

cytosol

cytosol

ubiquitin-dependent protein catabolic process

apoptosis

response to stress

immune response

intracellular signaling cascade

protein localization

zinc ion binding

endosome transport

cell differentiation

receptor tyrosine kinase binding

SH2 domain binding

SH2 domain binding

regulation of I-kappaB kinase/NF-kappaB cascade

regulation of I-kappaB kinase/NF-kappaB cascade

ubiquitin binding

ubiquitin binding

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

 
205181_at 0.515 6.308 4.355 5.482e-04 0.050 -0.032 ZNF193 zinc finger protein 193 6 28301051 NM_006299 6p21.3 Hs.100921 8

transcription factor activity

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
235729_at 0.869 5.930 4.354 5.494e-04 0.050 -0.034 ZNF514 zinc finger protein 514 2 -95177126 T93113 2q11.1 Hs.655109 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
201298_s_at -0.446 7.583 -4.354 5.494e-04 0.050 -0.034 MOBKL1B MOB1, Mps One Binder kinase activator-like 1B (yeast) 2 -74236718 BC003398 2p13.1 Hs.196437 12

protein binding

zinc ion binding

metal ion binding

 
208666_s_at -0.624 8.509 -4.353 5.503e-04 0.050 -0.035 ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) 22 -39550546 BE866412 22q13.2 Hs.712713 29

binding

cytoplasm

protein folding

protein binding, bridging

 
239043_at 0.887 3.229 4.353 5.506e-04 0.050 -0.036 ZNF404 zinc finger protein 404 19 -49068354 AA084273 19q13.31 Hs.76561 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
224367_at 2.962 6.783 4.352 5.516e-04 0.050 -0.037 BEX2 brain expressed X-linked 2 X -102450929 AF251053 Xq22 Hs.398989 11

nucleus

cytoplasm

 
222736_s_at -0.703 6.886 -4.345 5.595e-04 0.051 -0.051 TMEM38B transmembrane protein 38B 9 107496645 BC000049 9q31.2 Hs.411925 5

potassium channel activity

endoplasmic reticulum

ion transport

potassium ion transport

membrane

integral to membrane

potassium ion binding

nuclear membrane

sarcoplasmic reticulum membrane

 
208352_x_at 0.579 11.108 4.345 5.595e-04 0.051 -0.051 ANK1 ankyrin 1, erythrocytic 8 -41629901, -41629901, -41629900 NM_020479 8p11.1 Hs.654438 Hs.667377 49

structural constituent of cytoskeleton

cytoplasm

plasma membrane

exocytosis

cytoskeleton organization

signal transduction

cytoskeletal adaptor activity

spectrin-associated cytoskeleton

basolateral plasma membrane

sarcoplasmic reticulum

enzyme binding

spectrin binding

M band

maintenance of epithelial cell apical/basal polarity

 
214179_s_at -0.585 10.811 -4.345 5.600e-04 0.051 -0.051 NFE2L1 nuclear factor (erythroid-derived 2)-like 1 17 43480684 H93013 17q21.3 Hs.514284 20

transcription factor activity

transcription cofactor activity

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

heme biosynthetic process

inflammatory response

anatomical structure morphogenesis

sequence-specific DNA binding

protein dimerization activity

 
221493_at -0.578 10.576 -4.345 5.603e-04 0.051 -0.052 TSPYL1 TSPY-like 1 6 -116704438 AL136629 6q22-q23 Hs.458358 Hs.486292 11

molecular_function

cellular_component

intracellular

nucleus

nucleolus

nucleosome assembly

biological_process

 
212731_at -0.727 8.864 -4.343 5.615e-04 0.051 -0.054 ANKRD46 ankyrin repeat domain 46 8 -101602175 U79297 8q22.2 Hs.530199 5

membrane

integral to membrane

 
217993_s_at -0.551 9.801 -4.337 5.688e-04 0.051 -0.066 MAT2B methionine adenosyltransferase II, beta 5 162862808, 162865162 NM_013283 5q34-q35 Hs.54642 20

catalytic activity

protein binding

intracellular

nucleus

S-adenosylmethionine biosynthetic process

S-adenosylmethionine biosynthetic process

one-carbon metabolic process

metabolic process

dTDP-4-dehydrorhamnose reductase activity

extracellular polysaccharide biosynthetic process

methionine adenosyltransferase complex

methionine adenosyltransferase regulator activity

methionine adenosyltransferase regulator activity

Cysteine and methionine metabolism

Selenoamino acid metabolism

Biosynthesis of plant hormones

Metabolic pathways

224443_at 1.088 6.229 4.337 5.689e-04 0.051 -0.066 C1orf97 chromosome 1 open reading frame 97 1 209622719 BC005997 1q32.3 Hs.523932 4    
204349_at -0.474 6.528 -4.336 5.701e-04 0.051 -0.068 MED7 mediator complex subunit 7 5 -156498028, -156498028 BC005250 5q33.3 Hs.279902 Hs.719330 15

transcription coactivator activity

protein binding

nucleus

transcription factor complex

regulation of transcription from RNA polymerase II promoter

transcription initiation from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

transcription regulator activity

regulation of transcription

 
225911_at 1.238 4.528 4.335 5.714e-04 0.051 -0.070 NPNT nephronectin 4 107036053 AL138410 4q24 Hs.518921 5

calcium ion binding

protein binding

extracellular region

proteinaceous extracellular matrix

cell adhesion

multicellular organismal development

membrane

cell differentiation

 
204685_s_at -1.766 7.048 -4.330 5.765e-04 0.051 -0.078 ATP2B2 ATPase, Ca++ transporting, plasma membrane 2 3 -10340706 R52647 3p25.3 Hs.268942 30

nucleotide binding

magnesium ion binding

calcium-transporting ATPase activity

calcium ion binding

calmodulin binding

ATP binding

cytoplasm

plasma membrane

ATP biosynthetic process

cation transport

calcium ion transport

sensory perception of sound

metabolic process

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

neuron differentiation

Calcium signaling pathway

218959_at -0.536 7.426 -4.326 5.821e-04 0.052 -0.087 HOXC10 homeobox C10 12 52665212 NM_017409 12q13.3 Hs.44276 13

skeletal system development

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

positive regulation of cell proliferation

anterior/posterior pattern formation

proximal/distal pattern formation

cyclin-dependent protein kinase activating kinase holoenzyme complex

spinal cord motor neuron cell fate specification

embryonic limb morphogenesis

sequence-specific DNA binding

neuromuscular process

 
230030_at -2.177 4.863 -4.325 5.823e-04 0.052 -0.088 HS6ST2 heparan sulfate 6-O-sulfotransferase 2 X -131587718 AI767756 Xq26.2 Hs.385956 7

sulfotransferase activity

membrane

integral to membrane

transferase activity

Heparan sulfate biosynthesis

229743_at -0.396 6.571 -4.321 5.870e-04 0.052 -0.095 ZNF438 zinc finger protein 438 10 -31173572, -31173572 AI886666 10p11.23-p11.22 Hs.660642 6

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
223082_at 1.054 8.513 4.319 5.897e-04 0.052 -0.099 SH3KBP1 SH3-domain kinase binding protein 1 X -19462003, -19462003 AF230904 Xp22.1-p21.3 Hs.719268 58

molecular_function

protein binding

nucleus

nucleolus

cytoplasm

cytosol

cytoskeleton

plasma membrane

focal adhesion

endocytosis

apoptosis

cell-cell signaling

SH3 domain binding

synaptosome

cell junction

cytoplasmic vesicle

synapse

Endocytosis

237116_at -0.946 7.747 -4.319 5.897e-04 0.052 -0.099 LOC646903 hypothetical LOC646903 3   AI262277 3q25.1 Hs.632559 1    
226488_at 0.500 7.508 4.318 5.913e-04 0.052 -0.102 RCCD1 RCC1 domain containing 1 15 89299109 AW007826 15q26.1 Hs.655895 4    
228302_x_at 0.362 3.618 4.318 5.917e-04 0.052 -0.103 CAMK2N1 calcium/calmodulin-dependent protein kinase II inhibitor 1 1 -20681470 AW162846 1p36.12 Hs.197922 4

plasma membrane

calcium-dependent protein kinase inhibitor activity

postsynaptic density

synaptosome

protein kinase binding

cell junction

dendrite

cell soma

synapse

postsynaptic membrane

 
200655_s_at -0.458 10.516 -4.316 5.930e-04 0.052 -0.105 CALM1 calmodulin 1 (phosphorylase kinase, delta) 14 89933125 NM_006888 14q24-q31 Hs.282410 Hs.708270 181  

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Glioma

226024_at 0.408 8.761 4.315 5.945e-04 0.052 -0.107 COMMD1 copper metabolism (Murr1) domain containing 1 2 61986306 BG481459 2p15 Hs.468702 28

nucleus

cytoplasm

identical protein binding

 
226651_at -1.054 7.921 -4.314 5.957e-04 0.052 -0.109 HOMER1 homer homolog 1 (Drosophila) 5 -78705541 AW052119 5q14.2 Hs.591761 33

skeletal muscle contraction

protein binding

membrane fraction

cytoplasm

plasma membrane

integral to plasma membrane

activation of phospholipase C activity by metabotropic glutamate receptor signaling pathway

synaptic transmission

postsynaptic density

Z disc

cell junction

positive regulation of calcium ion transport via store-operated calcium channel activity

costamere

synapse

postsynaptic membrane

skeletal muscle fiber development

 
241813_at -0.876 5.183 -4.313 5.972e-04 0.052 -0.111 MBD1 methyl-CpG binding domain protein 1 18 -46049213 BG252318 18q21 Hs.405610 40

transcription factor activity

transcription corepressor activity

protein binding

nucleus

transcription from RNA polymerase II promoter

zinc ion binding

methyl-CpG binding

negative regulation of transcription

nuclear speck

metal ion binding

 
212155_at 0.974 8.699 4.309 6.017e-04 0.052 -0.118 RNF187 ring finger protein 187 1 226741716 AA085748 1q42.13 Hs.356377 Hs.679030 3    
235261_at -0.578 10.438 -4.308 6.028e-04 0.052 -0.120 UNC45B unc-45 homolog B (C. elegans) 17 30498948 AI800785 17q12 Hs.379636 4

binding

multicellular organismal development

muscle organ development

cell differentiation

 
213019_at -0.495 7.854 -4.305 6.068e-04 0.053 -0.126 RANBP6 RAN binding protein 6 9 -6001019, -6001018 AI123233 9p24.1 Hs.167496 Hs.675725 5

binding

nucleus

cytoplasm

protein transport

 
222446_s_at 0.523 5.510 4.304 6.078e-04 0.053 -0.128 BACE2 beta-site APP-cleaving enzyme 2 21 41461597 AF178532 21q22.3 Hs.529408 42

aspartic-type endopeptidase activity

membrane fraction

protein modification process

proteolysis

membrane protein ectodomain proteolysis

peptidase activity

protein secretion

membrane

integral to membrane

peptide hormone processing

negative regulation of amyloid precursor protein biosynthetic process

Alzheimer's disease

1556136_at -2.662 6.925 -4.302 6.111e-04 0.053 -0.133 MYLK4 myosin light chain kinase family, member 4 6 -2608861 BU675945 6p25.2 Hs.127830 4

nucleotide binding

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

transferase activity

 
230623_x_at -0.538 7.821 -4.301 6.120e-04 0.053 -0.134 USP28 ubiquitin specific peptidase 28 11 -113173806 AI609285 11q23 Hs.503891 9

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
203180_at 0.887 5.729 4.299 6.140e-04 0.053 -0.137 ALDH1A3 aldehyde dehydrogenase 1 family, member A3 15 99237531 NM_000693 15q26.3 Hs.459538 8

optic cup morphogenesis involved in camera-type eye development

aldehyde dehydrogenase [NAD(P)+] activity

cytoplasm

oxidoreductase activity

nucleus accumbens development

retinoic acid metabolic process

retinal metabolic process

protein homodimerization activity

positive regulation of apoptosis

embryonic eye morphogenesis

oxidation reduction

olfactory pit development

Glycolysis / Gluconeogenesis

Histidine metabolism

Tyrosine metabolism

Phenylalanine metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

Metabolic pathways

233461_x_at 0.836 5.286 4.297 6.174e-04 0.053 -0.142 ZNF226 zinc finger protein 226 19 49361088, 49361088, 49361096, 49361156 AK023091 19q13.2 Hs.145956 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
213238_at 0.487 5.264 4.293 6.214e-04 0.053 -0.148 ATP10D ATPase, class V, type 10D 4 47182166 AI478147 4p12 Hs.437241 4

nucleotide binding

magnesium ion binding

phospholipid-translocating ATPase activity

ATP binding

ATP biosynthetic process

cation transport

ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism

phospholipid transport

membrane

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

 
214681_at 0.300 4.794 4.293 6.214e-04 0.053 -0.148 GK glycerol kinase X 30581396 AI830490 Xp21.3 Hs.1466 20

nucleotide binding

glycerol kinase activity

glycerol kinase activity

ATP binding

cytoplasm

mitochondrion

mitochondrial outer membrane

cytosol

carbohydrate metabolic process

glycerol-3-phosphate metabolic process

membrane

transferase activity

Glycerolipid metabolism

Metabolic pathways

PPAR signaling pathway

224276_at 0.486 3.695 4.291 6.245e-04 0.053 -0.153 ZNF33A zinc finger protein 33A 10 38339583 AF063599 10p11.2 Hs.435774 8

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
231666_at -0.894 5.277 -4.289 6.267e-04 0.053 -0.156 PAX3 paired box 3 2 -222866592, -222774675, -222772850 AA194168 2q35 2q35-q37 Hs.42146 103

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

apoptosis

multicellular organismal development

sensory perception of sound

organ morphogenesis

sequence-specific DNA binding

 
1560145_at -0.482 5.884 -4.287 6.299e-04 0.054 -0.161 MKLN1 muskelin 1, intracellular mediator containing kelch motifs 7 130445394, 130663134 BQ942131 7q32 Hs.44693 13

protein binding

cytoplasm

signal transduction

 
218330_s_at 1.036 5.815 4.285 6.316e-04 0.054 -0.163 NAV2 neuron navigator 2 11 19328846, 19691456, 20001211 NM_018162 11p15.1 Hs.502116 Hs.551898 Hs.639427 Hs.639428 18

nucleotide binding

helicase activity

ATP binding

nucleus

nucleolus

cytoplasm

hydrolase activity

 
217843_s_at -0.504 7.886 -4.285 6.319e-04 0.054 -0.164 MED4 mediator complex subunit 4 13 -47548092 NM_014166 13q14.2 Hs.181112 21

transcription cofactor activity

receptor activity

protein binding

nucleus

nucleolus

cytoplasm

regulation of transcription from RNA polymerase II promoter

transcription initiation from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

transcription activator activity

ligand-dependent nuclear receptor transcription coactivator activity

androgen receptor signaling pathway

vitamin D receptor binding

regulation of transcription

thyroid hormone receptor binding

 
239178_at 0.677 2.287 4.283 6.343e-04 0.054 -0.167 FGF9 fibroblast growth factor 9 (glia-activating factor) 13 21143214 AL583692 13q11-q12 Hs.111 33

angiogenesis

osteoblast differentiation

positive regulation of mesenchymal cell proliferation

chondrocyte differentiation

extracellular region

extracellular region

extracellular space

protein import into nucleus

signal transduction

cell-cell signaling

growth factor activity

heparin binding

male gonad development

negative regulation of Wnt receptor signaling pathway

male sex determination

lung development

embryonic limb morphogenesis

positive regulation of vascular endothelial growth factor receptor signaling pathway

inner ear morphogenesis

positive regulation of MAPKKK cascade

positive regulation of fibroblast growth factor receptor signaling pathway

positive regulation of smoothened signaling pathway

regulation of timing of cell differentiation

embryonic gut development

embryonic skeletal system development

positive regulation of epithelial cell proliferation

positive regulation of cardiac muscle cell proliferation

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

209142_s_at -0.886 10.214 -4.282 6.358e-04 0.054 -0.169 UBE2G1 ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast) 17 -4119260 BC002775 17p13.2 1q42 Hs.714345 12

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ubiquitin-dependent protein catabolic process

ligase activity

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

Parkinson's disease

203049_s_at -0.581 8.672 -4.274 6.463e-04 0.054 -0.185 TTC37 tetratricopeptide repeat domain 37 5 -94825877 NM_014639 5q15 Hs.482868 4

binding

RNA degradation

203799_at 0.776 5.586 4.273 6.480e-04 0.055 -0.187 CD302 CD302 molecule 2 -160333386 NM_014880 2q24.2 Hs.130014 9

binding

sugar binding

membrane

integral to membrane

 
210619_s_at 1.255 6.791 4.270 6.514e-04 0.055 -0.192 HYAL1 hyaluronoglucosaminidase 1 3 -50312324, -50312323, -50312323 AF173154 3p21.3-p21.2 Hs.75619 30

hyalurononglucosaminidase activity

extracellular region

extracellular space

lysosome

carbohydrate metabolic process

metabolic process

hydrolase activity, acting on glycosyl bonds

glycosaminoglycan metabolic process

Glycosaminoglycan degradation

Metabolic pathways

1565162_s_at 2.041 4.909 4.270 6.515e-04 0.055 -0.192 MGST1 microsomal glutathione S-transferase 1 12 16391342, 16391845, 16391978, 16397617 D16947 12p12.3-p12.1 Hs.389700 22

glutathione transferase activity

mitochondrion

mitochondrial outer membrane

mitochondrial inner membrane

endoplasmic reticulum

microsome

glutathione metabolic process

membrane

transferase activity

Glutathione metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

209397_at 0.689 8.992 4.263 6.607e-04 0.055 -0.205 ME2 malic enzyme 2, NAD(+)-dependent, mitochondrial 18 46659432 BC000147 18q21 6p25-p24 Hs.233119 24

malate dehydrogenase (decarboxylating) activity

binding

mitochondrion

mitochondrial matrix

malate metabolic process

electron carrier activity

oxidoreductase activity

malate dehydrogenase (oxaloacetate-decarboxylating) activity

metal ion binding

NAD or NADH binding

oxidation reduction

Pyruvate metabolism

Biosynthesis of phenylpropanoids

Biosynthesis of alkaloids derived from terpenoid and polyketide

201227_s_at 0.438 10.740 4.263 6.611e-04 0.055 -0.206 NDUFB8 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa 10 -102273486 NM_005004 10q23.2-q23.33 Hs.523215 16

NADH dehydrogenase activity

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

endoplasmic reticulum

mitochondrial electron transport, NADH to ubiquinone

transport

NADH dehydrogenase (ubiquinone) activity

membrane

integral to membrane

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

223170_at 0.398 5.297 4.263 6.612e-04 0.055 -0.206 TMEM98 transmembrane protein 98 17 28279040 AF132000 17q11.2 Hs.3447 8

endoplasmic reticulum

membrane

integral to membrane

 
201994_at -0.456 11.098 -4.262 6.629e-04 0.055 -0.208 MORF4L2 mortality factor 4 like 2 X -102817083, -102817083 NM_012286 Xq22 Hs.326387 Hs.441076 Hs.597035 19

regulation of cell growth

molecular_function

protein binding

nucleus

nucleolus

DNA repair

response to DNA damage stimulus

chromatin modification

regulation of transcription

 
226921_at -0.770 8.092 -4.261 6.635e-04 0.055 -0.209 UBR1 ubiquitin protein ligase E3 component n-recognin 1 15 -41022389 AV715153 15q13 Hs.591121 21

ubiquitin ligase complex

proteasome complex

ubiquitin-protein ligase activity

protein binding

cytoplasm

cytosol

ubiquitin-dependent protein catabolic process

zinc ion binding

ligase activity

protein catabolic process

metal ion binding

 
212861_at -0.451 6.426 -4.261 6.639e-04 0.055 -0.210 MFSD5 major facilitator superfamily domain containing 5 12 51932146 BF690150 12q13.13 Hs.654660 7

transport

membrane

integral to membrane

 
37965_at 0.557 6.330 4.259 6.657e-04 0.055 -0.212 PARVB parvin, beta 22 42726505, 42751500 AA181053 22q13.2-q13.33 Hs.475074 18

actin binding

protein binding

cytoplasm

cytoskeleton

plasma membrane

focal adhesion

cell adhesion

cell junction

Focal adhesion

203132_at -0.815 7.917 -4.259 6.669e-04 0.055 -0.214 RB1 retinoblastoma 1 13 47775883 NM_000321 13q14.2 Hs.408528 525

cell cycle checkpoint

regulation of transcription of G1/S-phase of mitotic cell cycle

negative regulation of transcription from RNA polymerase II promoter

M phase

chromatin

transcription factor activity

transcription coactivator activity

nucleus

nucleoplasm

spindle

chromatin remodeling

negative regulation of protein kinase activity

cell cycle arrest

transcription factor binding

negative regulation of cell proliferation

SWI/SNF complex

transcription repressor activity

PML body

kinase binding

negative regulation of cell growth

androgen receptor signaling pathway

ubiquitin protein ligase binding

Rb-E2F complex

enucleate erythrocyte differentiation

regulation of lipid kinase activity

interspecies interaction between organisms

myoblast differentiation

regulation of transcription

positive regulation of macrophage differentiation

negative regulation of S phase of mitotic cell cycle

negative regulation of cell cycle

positive regulation of transcription from RNA polymerase II promoter

androgen receptor binding

striated muscle cell differentiation

phosphoprotein binding

cell division

G1 phase

Cell cycle

Pathways in cancer

Pancreatic cancer

Glioma

Prostate cancer

Melanoma

Bladder cancer

Chronic myeloid leukemia

Small cell lung cancer

Non-small cell lung cancer

208215_x_at 0.476 5.327 4.256 6.705e-04 0.055 -0.219 DRD4 dopamine receptor D4 11 627304 NM_000797 11p15.5 Hs.99922 339

activation of MAPK activity

dopamine D4 receptor activity

behavioral fear response

response to amphetamine

receptor activity

G-protein coupled receptor activity

protein binding

plasma membrane

integral to plasma membrane

cellular calcium ion homeostasis

signal transduction

negative regulation of adenylate cyclase activity

inhibition of adenylate cyclase activity by dopamine receptor signaling pathway

drug binding

adult locomotory behavior

potassium channel regulator activity

SH3 domain binding

negative regulation of cAMP biosynthetic process

positive regulation of sodium:hydrogen antiporter activity

positive regulation of kinase activity

response to histamine

social behavior

regulation of dopamine metabolic process

behavioral response to cocaine

behavioral response to ethanol

arachidonic acid secretion

negative regulation of protein secretion

positive regulation of dopamine uptake

negative regulation of calcium ion transport via voltage-gated calcium channel activity

regulation of inhibitory postsynaptic membrane potential

Neuroactive ligand-receptor interaction

222154_s_at -0.648 9.172 -4.254 6.724e-04 0.055 -0.222 SPATS2L spermatogenesis associated, serine-rich 2-like 2 200878848, 200879229, 200879600 AK002064 2q33.1 Hs.120323 9    
212352_s_at -0.532 10.051 -4.254 6.724e-04 0.055 -0.222 TMED10 transmembrane emp24-like trafficking protein 10 (yeast) 14 -74667923 BE780075 14q24.3 Hs.74137 22

protein binding

microsome

ER-Golgi intermediate compartment

Golgi apparatus

cis-Golgi network

protein transport

membrane

integral to membrane

vesicle-mediated transport

melanosome

zymogen granule membrane

regulated secretory pathway

vesicle targeting, to, from or within Golgi

 
202432_at -0.924 11.048 -4.254 6.725e-04 0.055 -0.222 PPP3CB protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform 10 -74866569 NM_021132 10q21-q22 Hs.500067 29

protein serine/threonine phosphatase activity

iron ion binding

calcium ion binding

calmodulin binding

calcineurin complex

signal transduction

zinc ion binding

hydrolase activity

MAPK signaling pathway

Calcium signaling pathway

Apoptosis

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Long-term potentiation

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

209108_at 0.541 5.392 4.254 6.726e-04 0.055 -0.222 TSPAN6 tetraspanin 6 X -99770450 AF053453 Xq22 Hs.43233 10

signal transducer activity

membrane

integral to membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

 
1552767_a_at -2.143 5.544 -4.254 6.728e-04 0.055 -0.222 HS6ST2 heparan sulfate 6-O-sulfotransferase 2 X -131587718 NM_147174 Xq26.2 Hs.385956 7

sulfotransferase activity

membrane

integral to membrane

transferase activity

Heparan sulfate biosynthesis

223299_at 0.425 7.028 4.254 6.737e-04 0.055 -0.223 SEC11C SEC11 homolog C (S. cerevisiae) 18 54958104 AF212233 18q21.32 Hs.45107 2

endoplasmic reticulum

microsome

signal peptide processing

proteolysis

peptidase activity

membrane

integral to membrane

Protein export

213327_s_at -0.504 6.620 -4.253 6.741e-04 0.055 -0.224 USP12 ubiquitin specific peptidase 12 13 -26540437 AI820101 13q12.13 Hs.42400 6

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

protein binding

cellular_component

protein modification process

ubiquitin-dependent protein catabolic process

peptidase activity

protein deubiquitination

 
218084_x_at 0.466 6.036 4.253 6.750e-04 0.055 -0.225 FXYD5 FXYD domain containing ion transport regulator 5 19 40337466 NM_014164 19q12-q13.1 Hs.333418 20

actin binding

ion channel activity

ion transport

membrane

integral to membrane

microvillus assembly

cadherin binding

negative regulation of calcium-dependent cell-cell adhesion

 
214901_at 0.528 5.371 4.251 6.768e-04 0.055 -0.228 ZNF8 zinc finger protein 8 19 63482129 AI671579 19q13.43 Hs.590941 Hs.713519 8

negative regulation of transcription from RNA polymerase II promoter

DNA binding

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

BMP signaling pathway

metal ion binding

 
204198_s_at 0.405 3.687 4.251 6.775e-04 0.055 -0.229 RUNX3 runt-related transcription factor 3 1 -25098588, -25098588 AA541630 1p36 Hs.170019 95

transcription factor activity

protein binding

ATP binding

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

induction of apoptosis

cell proliferation

negative regulation of cell cycle

negative regulation of epithelial cell proliferation

 
206542_s_at -0.735 8.391 -4.246 6.842e-04 0.055 -0.238 SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 9 2005341 AV725365 9p22.3 Hs.298990 63

nucleotide binding

DNA binding

transcription coactivator activity

helicase activity

protein binding

ATP binding

nucleus

nucleoplasm

chromatin remodeling

regulation of transcription from RNA polymerase II promoter

DNA-dependent ATPase activity

positive regulation of specific transcription from RNA polymerase II promoter

negative regulation of specific transcription from RNA polymerase II promoter

SWI/SNF complex

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

 
224394_at -0.541 4.431 -4.245 6.849e-04 0.055 -0.239 RNF7 ring finger protein 7 3 142939740 AF312226 3q22-q24 Hs.134623 25

copper ion binding

protein binding

nucleus

cytoplasm

anti-apoptosis

redox signal response

zinc ion binding

induction of apoptosis by oxidative stress

NEDD8 ligase activity

modification-dependent protein catabolic process

protein neddylation

metal ion binding

Ubiquitin mediated proteolysis

202641_at 0.478 6.960 4.245 6.861e-04 0.055 -0.240 ARL3 ADP-ribosylation factor-like 3 10 -104423477 NM_004311 10q23.3 Hs.182215 18

nucleotide binding

magnesium ion binding

GTP binding

intracellular

nucleus

Golgi apparatus

spindle

cell cycle

small GTPase mediated signal transduction

membrane

cell division

 
209278_s_at 1.893 4.644 4.244 6.866e-04 0.055 -0.241 TFPI2 tissue factor pathway inhibitor 2 7 -93353680 L27624 7q22 Hs.438231 63

serine-type endopeptidase inhibitor activity

extracellular matrix structural constituent

extracellular region

proteinaceous extracellular matrix

blood coagulation

peptidase inhibitor activity

 
221412_at 0.431 4.247 4.244 6.870e-04 0.055 -0.242 VN1R1 vomeronasal 1 receptor 1 19 -62658353 NM_020633 19q13.4 Hs.388810 Hs.677423 9

receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

biological_process

integral to membrane

pheromone receptor activity

response to pheromone

 
225333_at 0.398 4.335 4.243 6.886e-04 0.055 -0.244 ZNF496 zinc finger protein 496 1 -245530244 AI218383 1q44 Hs.654803 5

transcription factor activity

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
212927_at -0.680 6.316 -4.241 6.908e-04 0.055 -0.247 SMC5 structural maintenance of chromosomes 5 9 72063697 AB011166 9q21.12 Hs.534189 Hs.601181 13

nucleotide binding

ATP binding

nucleus

chromosome

DNA repair

DNA recombination

response to DNA damage stimulus

 
57588_at -1.384 8.282 -4.241 6.913e-04 0.055 -0.247 SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 20 19141289 R62432 20p13 Hs.654790 2

calcium ion binding

ion transport

potassium ion transport

sodium ion transport

calcium ion transport

calcium, potassium:sodium antiporter activity

symporter activity

antiporter activity

membrane

integral to membrane

potassium ion binding

sodium ion binding

 
230367_at -2.330 9.957 -4.240 6.925e-04 0.055 -0.249 SMTNL1 smoothelin-like 1 11 57065554 AI359511 11q12.1 Hs.68756 2

response to activity

peptidyl-serine phosphorylation

M band

I band

response to drug

contractile fiber

positive regulation of vasoconstriction

negative regulation of vasodilation

muscle organ morphogenesis

 
238441_at -0.858 9.214 -4.238 6.951e-04 0.055 -0.252 PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit 1 56883577 AI928203 1p31 Hs.437039 67

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

nucleoplasm

cytosol

protein amino acid phosphorylation

fatty acid biosynthetic process

cholesterol biosynthetic process

signal transduction

transferase activity

regulation of fatty acid oxidation

Regulation of autophagy

mTOR signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

Hypertrophic cardiomyopathy (HCM)

204068_at -0.432 6.685 -4.237 6.967e-04 0.055 -0.255 STK3 serine/threonine kinase 3 (STE20 homolog, yeast) 8 -99536036 NM_006281 8q22.2 Hs.492333 22

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

signal transduction

protein kinase cascade

transferase activity

positive regulation of apoptosis

protein dimerization activity

MAPK signaling pathway

202313_at -0.346 8.633 -4.234 7.017e-04 0.056 -0.261 PPP2R2A protein phosphatase 2 (formerly 2A), regulatory subunit B, alpha isoform 8 26204950 NM_002717 8p21.2 Hs.146339 44

protein phosphatase type 2A complex

protein serine/threonine phosphatase activity

protein binding

protein amino acid dephosphorylation

signal transduction

protein phosphatase type 2A regulator activity

response to morphine

Tight junction

229843_at -0.519 2.935 -4.229 7.078e-04 0.056 -0.269 FAM82B family with sequence similarity 82, member B 8 -87553693 BE962867 8q21.3 Hs.145386 5

binding

cytoplasm

microtubule

 
1555516_at -0.643 3.965 -4.229 7.082e-04 0.056 -0.270 FOXP2 forkhead box P2 7 113842287 BC018016 7q31 Hs.656280 50

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

caudate nucleus development

putamen development

protein homodimerization activity

sequence-specific DNA binding

metal ion binding

 
224415_s_at 0.495 9.434 4.228 7.090e-04 0.056 -0.271 HINT2 histidine triad nucleotide binding protein 2 9 -35802956 AF356515 9p13.3 Hs.70573 6

extracellular region

mitochondrion

hydrolase activity

 
203238_s_at 0.478 5.554 4.228 7.101e-04 0.056 -0.272 NOTCH3 Notch homolog 3 (Drosophila) 19 -15131443 NM_000435 19p13.2-p13.1 Hs.8546 96

receptor activity

calcium ion binding

protein binding

nucleus

plasma membrane

Notch signaling pathway

multicellular organismal development

integral to membrane

forebrain development

regulation of transcription

negative regulation of neuron differentiation

neuron fate commitment

regulation of developmental process

Dorso-ventral axis formation

Notch signaling pathway

231569_at 0.396 3.402 4.228 7.103e-04 0.056 -0.273 TMEM31 transmembrane protein 31 X 102852492 N58489 Xq22.2 Hs.98843 1

membrane

integral to membrane

 
213698_at 0.583 5.844 4.226 7.120e-04 0.056 -0.275 ZMYM6 zinc finger, MYM-type 6 1 -35224353 AI805560 1p34.2 Hs.533986 Hs.623978 Hs.675613 8

DNA binding

nucleus

nucleolus

multicellular organismal development

zinc ion binding

metal ion binding

 
235848_x_at -0.859 8.032 -4.226 7.120e-04 0.056 -0.275 ATL2 atlastin GTPase 2 2 -38375534 N35250 2p22.2-p22.1 Hs.594950 8

nucleotide binding

GTPase activity

GTP binding

membrane

integral to membrane

 
228810_at -0.658 5.632 -4.224 7.154e-04 0.056 -0.279 CCNYL1 cyclin Y-like 1 2 208284508 AW135279 2q33.3 Hs.471234 Hs.597952 5    
225342_at 0.951 5.487 4.224 7.156e-04 0.056 -0.279 AK3L1 adenylate kinase 3-like 1 1 65385819, 65386100, 65386473 AK026966 1p31.3 Hs.10862 Hs.592601 10

nucleotide binding

adenylate kinase activity

ATP binding

GTP binding

mitochondrion

mitochondrial matrix

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

transferase activity

Purine metabolism

Metabolic pathways

213793_s_at -0.991 8.633 -4.223 7.171e-04 0.056 -0.281 HOMER1 homer homolog 1 (Drosophila) 5 -78705541 BE550452 5q14.2 Hs.591761 33

skeletal muscle contraction

protein binding

membrane fraction

cytoplasm

plasma membrane

integral to plasma membrane

activation of phospholipase C activity by metabotropic glutamate receptor signaling pathway

synaptic transmission

postsynaptic density

Z disc

cell junction

positive regulation of calcium ion transport via store-operated calcium channel activity

costamere

synapse

postsynaptic membrane

skeletal muscle fiber development

 
216526_x_at 0.772 9.841 4.220 7.207e-04 0.056 -0.286 HLA-C major histocompatibility complex, class I, C 6 -31344507, -2686290, -2483726 AK024836 6p21.3 Hs.654404 Hs.656020 Hs.77961 521

antigen processing and presentation of peptide antigen via MHC class I

extracellular region

plasma membrane

integral to plasma membrane

immune response

immune response

membrane

integral to membrane

antigen processing and presentation

MHC class I receptor activity

MHC class I protein complex

interspecies interaction between organisms

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

238149_at 0.604 2.307 4.217 7.252e-04 0.056 -0.292 ZNF818P zinc finger protein 818 pseudogene 19   AI651641 19q13.42 Hs.444446  

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
203525_s_at -0.789 7.366 -4.217 7.255e-04 0.056 -0.292 APC adenomatous polyposis coli 5 112071116, 112101454 AI375486 5q21-q22 Hs.158932 386

cytokinesis after mitosis

kinetochore

kidney development

hair follicle development

nucleus

cytoplasm

centrosome

cytosol

cytoplasmic microtubule

protein complex assembly

response to DNA damage stimulus

negative regulation of microtubule depolymerization

cell cycle arrest

mitotic metaphase/anaphase transition

mitotic cell cycle spindle assembly checkpoint

axonogenesis

beta-catenin binding

microtubule binding

axis specification

anterior/posterior pattern formation

dorsal/ventral pattern formation

proximal/distal pattern formation

lateral plasma membrane

protein kinase regulator activity

protein kinase binding

negative regulation of Wnt receptor signaling pathway

positive regulation of cell migration

growth cone

positive regulation of epithelial cell differentiation

beta-catenin destruction complex

positive regulation of microtubule polymerization

cell projection membrane

positive regulation of pseudopodium assembly

T cell differentiation in the thymus

axon part

Axin-APC-beta-catenin-GSK3B complex

somatic stem cell maintenance

negative regulation of odontogenesis

cell projection

positive regulation of apoptosis

negative regulation of apoptosis

negative regulation of MAPKKK cascade

skin development

regulation of osteoblast differentiation

regulation of osteoclast differentiation

positive regulation of protein catabolic process

negative regulation of cyclin-dependent protein kinase activity

positive regulation of cell adhesion

muscle maintenance

thymus development

negative regulation of epithelial cell proliferation

regulation of nitrogen compound metabolic process

chromosome organization

regulation of cell cycle

positive regulation of cell division

regulation of attachment of spindle microtubules to kinetochore

retina development in camera-type eye

Wnt receptor signaling pathway through beta-catenin

Wnt receptor signaling pathway through beta-catenin

Wnt signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Colorectal cancer

Endometrial cancer

Basal cell carcinoma

217828_at -0.554 8.005 -4.214 7.295e-04 0.056 -0.297 SLTM SAFB-like, transcription modulator 15 -56958535 NM_024755 15q22.1 Hs.512932 3

nucleotide binding

RNA binding

nucleus

apoptosis

regulation of transcription

 
226531_at -1.067 7.220 -4.213 7.317e-04 0.056 -0.300 ORAI1 ORAI calcium release-activated calcium modulator 1 12 120548837 AL530596 12q24.31 Hs.55148 56

ion channel activity

calcium ion binding

protein binding

plasma membrane

integral to plasma membrane

ion transport

immune response

store-operated calcium channel activity

positive regulation of calcium ion transport

 
202174_s_at -0.569 9.124 -4.209 7.379e-04 0.057 -0.308 PCM1 pericentriolar material 1 8 17824645 NM_006197 8p22-p21.3 Hs.491148 36

pericentriolar material

protein binding

cytoplasm

cytoskeleton

nonmotile primary cilium

centriolar satellite

cilium assembly

cilium assembly

centrosome organization

 
222991_s_at -0.639 7.157 -4.208 7.388e-04 0.057 -0.309 UBQLN1 ubiquilin 1 9 -85464697 AL136643 9q21.2-q21.3 9q22 Hs.9589 46

nucleus

cytoplasm

cytosol

kinase binding

protein complex

perinuclear region of cytoplasm

 
215464_s_at 0.563 6.211 4.206 7.416e-04 0.057 -0.313 TAX1BP3 Tax1 (human T-cell leukemia virus type I) binding protein 3 17 -3512937 AK001327 17p13 Hs.12956 14

nucleus

cytoplasm

Rho protein signal transduction

beta-catenin binding

negative regulation of cell proliferation

negative regulation of Wnt receptor signaling pathway

transcription regulator activity

 
209323_at -0.524 8.357 -4.205 7.440e-04 0.057 -0.316 PRKRIR protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) 11 -75738651 AF081567 11q13.5 Hs.503315 12

DNA binding

nucleus

nucleolus

response to stress

signal transduction

zinc ion binding

negative regulation of cell proliferation

metal ion binding

protein dimerization activity

 
219457_s_at 0.447 5.367 4.204 7.448e-04 0.057 -0.317 RIN3 Ras and Rab interactor 3 14 92049877 NM_024832 14q32.12 Hs.326822 8

GTPase activator activity

protein binding

cellular_component

cytoplasm

early endosome

endocytosis

signal transduction

Ras GTPase binding

cytoplasmic vesicle

 
215175_at 0.519 5.740 4.204 7.455e-04 0.057 -0.317 PCNX pecanex homolog (Drosophila) 14 70443874 AB023212 14q24.2 Hs.446559 10

membrane

integral to membrane

 
205741_s_at 0.509 9.024 4.200 7.511e-04 0.057 -0.324 DTNA dystrobrevin, alpha 18 30327251, 30327251, 30327251, 30427279, 30544193, 30589937, 30589937, 30652299, 30652299 NM_001392 18q12 Hs.643454 38

calcium ion binding

protein binding

cytoplasm

striated muscle contraction

signal transduction

neuromuscular synaptic transmission

zinc ion binding

cell junction

synapse

 
229452_at 0.491 7.104 4.200 7.513e-04 0.057 -0.325 TMEM88 transmembrane protein 88 17 7699108 AL544576 17p13.1 Hs.389669 2

membrane

integral to membrane

 
225908_at 0.390 8.659 4.199 7.532e-04 0.057 -0.327 IAH1 isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae) 2 9532120 AI829927 2p25.1 Hs.614939 2

lipid catabolic process

hydrolase activity, acting on ester bonds

 
225053_at -0.462 10.293 -4.197 7.555e-04 0.057 -0.330 CNOT7 CCR4-NOT transcription complex, subunit 7 8 -17133392, -17131110 W94952 8p22-p21.3 Hs.645009 Hs.719129 19

nucleic acid binding

transcription factor activity

signal transducer activity

protein binding

nucleus

carbohydrate metabolic process

signal transduction

transcription activator activity

CCR4-NOT complex

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

RNA degradation

1553102_a_at -0.637 8.649 -4.197 7.560e-04 0.057 -0.331 CCDC69 coiled-coil domain containing 69 5 -150540805 BC016647 5q33.1 Hs.655336 3    
209061_at -0.686 7.687 -4.194 7.603e-04 0.057 -0.336 NCOA3 nuclear receptor coactivator 3 20 45564063 AI761748 20q12 Hs.592142 140

transcription coactivator activity

histone acetyltransferase activity

signal transducer activity

nucleus

cytoplasm

signal transduction

acyltransferase activity

transferase activity

androgen receptor signaling pathway

transcription regulator activity

positive regulation of transcription, DNA-dependent

thyroid hormone receptor binding

protein N-terminus binding

androgen receptor binding

 
211654_x_at 0.502 6.355 4.194 7.609e-04 0.057 -0.337 HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 6 -32735634 M17565 6p21.3 Hs.409934 Hs.534322 Hs.713773 998

antigen processing and presentation of peptide or polysaccharide antigen via MHC class II

plasma membrane

immune response

immune response

membrane

membrane

integral to membrane

MHC class II receptor activity

MHC class II protein complex

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

203662_s_at -0.690 9.137 -4.192 7.636e-04 0.058 -0.340 TMOD1 tropomodulin 1 9 99326257 NM_003275 9q22.3 Hs.494595 18

actin binding

tropomyosin binding

nucleus

cytoplasm

membrane

myofibril

myofibril assembly

cortical cytoskeleton

 
201079_at -0.666 9.237 -4.188 7.697e-04 0.058 -0.347 SYNGR2 synaptogyrin 2 17 73676265 NM_004710 17q25.3 Hs.464210 Hs.708616 5

integral to plasma membrane

membrane

 
219873_at 0.363 5.007 4.186 7.730e-04 0.058 -0.351 COLEC11 collectin sub-family member 11 2 3620511 NM_024027 2p25.3 Hs.32603 3

binding

calcium ion binding

sugar binding

mannose binding

extracellular region

 
209032_s_at 0.696 6.063 4.186 7.731e-04 0.058 -0.351 CADM1 cell adhesion molecule 1 11 -114549554 AF132811 11q23.2 Hs.370510 50

T cell mediated cytotoxicity

receptor binding

receptor binding

plasma membrane

cell-cell junction

apoptosis

immune response

cell adhesion

homophilic cell adhesion

heterophilic cell adhesion

multicellular organismal development

spermatogenesis

protein C-terminus binding

cell recognition

cell recognition

integral to membrane

basolateral plasma membrane

cell differentiation

PDZ domain binding

susceptibility to natural killer cell mediated cytotoxicity

susceptibility to natural killer cell mediated cytotoxicity

protein homodimerization activity

positive regulation of cytokine secretion

activated T cell proliferation

detection of stimulus

detection of stimulus

Cell adhesion molecules (CAMs)

200923_at 0.832 5.659 4.184 7.767e-04 0.058 -0.356 LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein 17 -74478930 NM_005567 17q25 Hs.514535 36

scavenger receptor activity

protein binding

extracellular region

proteinaceous extracellular matrix

extracellular space

nucleus

cellular defense response

cell adhesion

signal transduction

membrane

 
218172_s_at -0.858 5.866 -4.183 7.777e-04 0.058 -0.357 DERL1 Der1-like domain family, member 1 8 -124094748 NM_018630 8q24.13 Hs.241576 28

receptor activity

protein binding

endoplasmic reticulum

endoplasmic reticulum

response to unfolded protein

protein transport

membrane

integral to membrane

intracellular transport of viral proteins in host cell

integral to endoplasmic reticulum membrane

ER-associated protein catabolic process

endoplasmic reticulum unfolded protein response

retrograde protein transport, ER to cytosol

MHC class I protein binding

interspecies interaction between organisms

Amyotrophic lateral sclerosis (ALS)

201238_s_at -0.728 10.394 -4.181 7.816e-04 0.058 -0.361 CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 7 116289798 BC005338 7q31.2-q31.3 Hs.446123 14

actin binding

protein binding

protein complex assembly

cell motion

F-actin capping protein complex

actin cytoskeleton organization

actin filament capping

 
233647_s_at 0.531 6.259 4.178 7.855e-04 0.058 -0.366 CDADC1 cytidine and dCMP deaminase domain containing 1 13 48720103 AL138875 13q14.2 Hs.388220 2

zinc ion binding

hydrolase activity

metal ion binding

 
1553961_s_at 0.653 6.769 4.178 7.864e-04 0.058 -0.367 SNX21 sorting nexin family member 21 20 43895876 CA447177 20q13.12 Hs.472854 8

protein binding

cell communication

protein transport

phosphoinositide binding

 
212573_at -0.622 8.451 -4.175 7.906e-04 0.058 -0.372 ENDOD1 endonuclease domain containing 1 11 94462664 AF131747 11q21 Hs.167115 6

nucleic acid binding

endonuclease activity

extracellular region

hydrolase activity

metal ion binding

Apoptosis

207145_at -0.885 4.700 -4.175 7.907e-04 0.058 -0.372 MSTN myostatin 2 -190628670 NM_005259 2q32.2 Hs.41565 55

cytokine activity

extracellular region

extracellular space

transforming growth factor beta receptor signaling pathway

muscle organ development

growth factor activity

growth

positive regulation of transcription

 
205007_s_at 0.798 6.177 4.174 7.926e-04 0.058 -0.374 CIB2 calcium and integrin binding family member 2 15 -76184045 AI478592 15q24 Hs.129867 6

calcium ion binding

protein binding

 
223527_s_at 0.483 5.585 4.170 7.993e-04 0.059 -0.382 CDADC1 cytidine and dCMP deaminase domain containing 1 13 48720103 AL138875 13q14.2 Hs.388220 2

zinc ion binding

hydrolase activity

metal ion binding

 
219656_at 0.369 6.482 4.169 7.995e-04 0.059 -0.383 PCDH12 protocadherin 12 5 -141304713 NM_016580 5q31 Hs.439474 10

calcium ion binding

protein binding

plasma membrane

integral to plasma membrane

cell-cell junction

cell adhesion

homophilic cell adhesion

neuron recognition

calcium-dependent cell-cell adhesion

 
208949_s_at 0.622 9.829 4.169 7.999e-04 0.059 -0.383 LGALS3 lectin, galactoside-binding, soluble, 3 14 54665624, 54673658 BC001120 14q21-q22 Hs.531081 162

skeletal system development

protein binding

sugar binding

proteinaceous extracellular matrix

nucleus

cytoplasm

plasma membrane

IgE binding

cell differentiation

extracellular matrix organization

 
222735_at -0.765 9.485 -4.168 8.021e-04 0.059 -0.386 TMEM38B transmembrane protein 38B 9 107496645 AW452608 9q31.2 Hs.411925 5

potassium channel activity

endoplasmic reticulum

ion transport

potassium ion transport

membrane

integral to membrane

potassium ion binding

nuclear membrane

sarcoplasmic reticulum membrane

 
238497_at 0.359 3.491 4.167 8.034e-04 0.059 -0.387 TMEM136 transmembrane protein 136 11 119701225 N51836 11q23.3 Hs.706896 1

membrane

integral to membrane

 
1552701_a_at 0.635 4.232 4.166 8.050e-04 0.059 -0.389 CARD16 caspase recruitment domain family, member 16 11 -104417262 NM_052889   Hs.348365 8

cysteine-type endopeptidase activity

cysteine-type endopeptidase inhibitor activity

protein binding

intracellular

proteolysis

peptidase inhibitor activity

regulation of apoptosis

 
201661_s_at -0.717 9.035 -4.164 8.086e-04 0.059 -0.393 ACSL3 acyl-CoA synthetase long-chain family member 3 2 223433975 NM_004457 2q34-q35 Hs.655772 20

nucleotide binding

magnesium ion binding

fatty-acyl-CoA synthase activity

long-chain-fatty-acid-CoA ligase activity

protein binding

ATP binding

mitochondrion

mitochondrial outer membrane

peroxisome

endoplasmic reticulum

microsome

lipid metabolic process

fatty acid metabolic process

metabolic process

membrane

integral to membrane

ligase activity

Fatty acid metabolism

Metabolic pathways

PPAR signaling pathway

Adipocytokine signaling pathway

225243_s_at -0.761 8.469 -4.162 8.118e-04 0.059 -0.397 SLMAP sarcolemma associated protein 3 57718213 AB046821 3p21.2-p14.3 Hs.476432 11

smooth endoplasmic reticulum

plasma membrane

integral to plasma membrane

protein folding

muscle contraction

prefoldin complex

unfolded protein binding

 
212993_at -0.486 7.263 -4.161 8.138e-04 0.059 -0.399 NACC2 NACC family member 2, BEN and BTB (POZ) domain containing 9 -138043023 AA114166 9q34.3 Hs.112895 3

protein binding

nucleus

positive regulation of cell proliferation

negative regulation of transcription

specific transcriptional repressor activity

nuclear body

protein homooligomerization

 
204979_s_at -0.447 11.743 -4.161 8.140e-04 0.059 -0.399 SH3BGR SH3 domain binding glutamic acid-rich protein 21 39739666, 39745649 NM_007341 21q22.3 Hs.473847 8

SH3/SH2 adaptor activity

cytosol

protein complex assembly

SH3 domain binding

 
214022_s_at 0.839 8.409 4.160 8.143e-04 0.059 -0.400 IFITM1 interferon induced transmembrane protein 1 (9-27) 11 303990 AA749101 11p15.5 Hs.458414 16

receptor signaling protein activity

protein binding

plasma membrane

cell surface receptor linked signal transduction

negative regulation of cell proliferation

response to biotic stimulus

integral to membrane

B cell receptor signaling pathway

223598_at -0.672 9.548 -4.159 8.160e-04 0.059 -0.402 RAD23B RAD23 homolog B (S. cerevisiae) 9 109085364 AF262027 9q31.2 Hs.521640 54

nucleotide-excision repair, DNA damage removal

damaged DNA binding

single-stranded DNA binding

protein binding

nucleus

nucleoplasm

cytoplasm

cytosol

response to DNA damage stimulus

modification-dependent protein catabolic process

proteasomal ubiquitin-dependent protein catabolic process

protein complex

Nucleotide excision repair

226206_at -0.601 8.209 -4.158 8.183e-04 0.059 -0.404 MAFK v-maf musculoaponeurotic fibrosarcoma oncogene homolog K (avian) 7 1536893 BG231691 7p22.3 Hs.520612 14

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

nervous system development

sequence-specific DNA binding

 
202808_at -0.599 7.423 -4.158 8.187e-04 0.059 -0.405 C10orf26 chromosome 10 open reading frame 26 10 104493716, 104525877 AK000161 10q24.32 Hs.500897 Hs.693257 Hs.707763 9

membrane

integral to membrane

 
204663_at 0.409 7.408 4.157 8.199e-04 0.059 -0.406 ME3 malic enzyme 3, NADP(+)-dependent, mitochondrial 11 -85829799, -85829797, -85829797 NM_006680 11cen-q22.3 Hs.199743 8

malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity

mitochondrion

mitochondrial matrix

pyruvate metabolic process

malate metabolic process

oxygen and reactive oxygen species metabolic process

aerobic respiration

oxidoreductase activity

metal ion binding

cofactor binding

NAD or NADH binding

oxidation reduction

Pyruvate metabolism

Carbon fixation in photosynthetic organisms

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Metabolic pathways

213279_at 0.522 5.807 4.156 8.221e-04 0.059 -0.408 DHRS1 dehydrogenase/reductase (SDR family) member 1 14 -23829645, -23829645 AL050217 14q12 Hs.719146 13

binding

nucleus

cytoplasm

mitochondrial inner membrane

endoplasmic reticulum

Golgi apparatus

oxidoreductase activity

oxidation reduction

 
1554168_a_at 1.040 7.854 4.155 8.235e-04 0.059 -0.410 SH3KBP1 SH3-domain kinase binding protein 1 X -19462003, -19462003 AF542051 Xp22.1-p21.3 Hs.719268 58

molecular_function

protein binding

nucleus

nucleolus

cytoplasm

cytosol

cytoskeleton

plasma membrane

focal adhesion

endocytosis

apoptosis

cell-cell signaling

SH3 domain binding

synaptosome

cell junction

cytoplasmic vesicle

synapse

Endocytosis

217980_s_at 0.386 9.327 4.154 8.244e-04 0.059 -0.411 MRPL16 mitochondrial ribosomal protein L16 11 -59330183 NM_017840 11q12-q13.1 Hs.530734 7

structural constituent of ribosome

intracellular

mitochondrion

mitochondrial large ribosomal subunit

ribosome

translation

 
212610_at -0.581 10.103 -4.154 8.250e-04 0.059 -0.412 PTPN11 protein tyrosine phosphatase, non-receptor type 11 12 111340918 U79291 12q24 Hs.506852 Hs.646231 326

non-membrane spanning protein tyrosine phosphatase activity

non-membrane spanning protein tyrosine phosphatase activity

protein binding

cytoplasm

cytosol

protein amino acid dephosphorylation

signal transduction

hydrolase activity

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Adipocytokine signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

Renal cell carcinoma

Chronic myeloid leukemia

209356_x_at 0.492 6.281 4.149 8.337e-04 0.060 -0.421 EFEMP2 EGF-containing fibulin-like extracellular matrix protein 2 11 -65390487 AB030655 11q13.1 Hs.170622 15

transmembrane receptor activity

extracellular matrix structural constituent

calcium ion binding

protein binding

extracellular region

basement membrane

blood coagulation

membrane

 
211382_s_at -0.597 9.133 -4.148 8.350e-04 0.060 -0.423 TACC2 transforming, acidic coiled-coil containing protein 2 10 123738678, 123913094 AF220152 10q26 Hs.501252 Hs.713875 18

protein binding

nucleus

cytoplasm

centrosome

nuclear hormone receptor binding

 
207417_s_at 0.615 3.952 4.146 8.385e-04 0.060 -0.427 ZNF177 zinc finger protein 177 19 9334695 NM_003451 19p13.2 Hs.172979 4

negative regulation of transcription from RNA polymerase II promoter

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
226822_at 0.563 5.658 4.146 8.388e-04 0.060 -0.427 STOX2 storkhead box 2 4 185063502 AL512713 4q35.1 Hs.21958 Hs.696657 3    
239462_at 0.460 5.274 4.145 8.401e-04 0.060 -0.429 ZNF284 zinc finger protein 284 19 49268136 AI559740 19q13.31 Hs.279840 Hs.445395 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
236574_at 0.320 5.748 4.143 8.437e-04 0.060 -0.433 LOC284373 hypothetical protein LOC284373 19   AI304870 19q13.41 Hs.188680 1    
217122_s_at -0.497 7.810 -4.141 8.464e-04 0.060 -0.436 RP11-345P4.4 similar to solute carrier family 35, member E2 1 -1582801 AL031282 1p36.33 Hs.655255 6

membrane

integral to membrane

 
219632_s_at 0.632 5.676 4.140 8.484e-04 0.060 -0.438 TRPV1 transient receptor potential cation channel, subfamily V, member 1 17 -3415489, -3415489, -3415489, -3415489 AF196175 17p13.2 Hs.579217 Hs.655380 107

nucleotide binding

ion channel activity

calcium channel activity

calcium ion binding

calmodulin binding

ATP binding

plasma membrane

integral to plasma membrane

ion transport

calcium ion transport

cell surface receptor linked signal transduction

chemosensory behavior

thermoception

Neuroactive ligand-receptor interaction

216887_s_at -0.715 11.269 -4.129 8.683e-04 0.061 -0.459 LDB3 LIM domain binding 3 10 88418300, 88418405, 88418405 AJ133768 10q22.3-q23.2 Hs.657271 15

protein binding

cytoplasm

cytoskeleton

zinc ion binding

Z disc

pseudopodium

metal ion binding

perinuclear region of cytoplasm

 
225268_at -0.618 10.637 -4.129 8.689e-04 0.061 -0.460 KPNA4 karyopherin alpha 4 (importin alpha 3) 3 -161700655 AU144710 3q25.33 Hs.715552 53

protein binding

nucleus

nuclear pore

cytoplasm

NLS-bearing substrate import into nucleus

intracellular protein transport

protein transporter activity

 
227951_s_at 0.649 5.800 4.127 8.709e-04 0.061 -0.462 FAM98C family with sequence similarity 98, member C 19 43585614 AW338561 19q13.2 Hs.355162 2    
226229_s_at 0.417 5.867 4.116 8.920e-04 0.062 -0.484 SSU72 SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) 1 -1466915 BF510732 1p36.33 Hs.30026 Hs.657061 7

phosphoprotein phosphatase activity

nucleus

cytoplasm

mRNA processing

hydrolase activity

 
203756_at 0.379 6.736 4.116 8.922e-04 0.062 -0.485 ARHGEF17 Rho guanine nucleotide exchange factor (GEF) 17 11 72697310 NM_014786 11q13.4 Hs.533719 Hs.719521 8

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

intracellular

actin cytoskeleton organization

regulation of Rho protein signal transduction

 
202698_x_at 0.409 12.077 4.115 8.927e-04 0.062 -0.485 COX4I1 cytochrome c oxidase subunit IV isoform 1 16 84390696 NM_001861 16q22-qter Hs.433419 17

cytochrome-c oxidase activity

protein binding

nucleus

mitochondrion

mitochondrial inner membrane

generation of precursor metabolites and energy

membrane

Oxidative phosphorylation

Metabolic pathways

Cardiac muscle contraction

Alzheimer's disease

Parkinson's disease

Huntington's disease

202693_s_at -0.725 5.990 -4.114 8.947e-04 0.062 -0.487 STK17A serine/threonine kinase 17a 7 43589216 AW194730 7p12-p14 Hs.709489 6

nucleotide binding

protein serine/threonine kinase activity

ATP binding

nucleus

protein amino acid phosphorylation

apoptosis

induction of apoptosis

protein kinase cascade

transferase activity

 
226679_at 0.519 6.465 4.113 8.966e-04 0.062 -0.489 SLC26A11 solute carrier family 26, member 11 17 75808831 BE964598 17q25.3 Hs.4866 4

transporter activity

endoplasmic reticulum

Golgi apparatus

plasma membrane

ion transport

secondary active sulfate transmembrane transporter activity

sulfate transport

anion transmembrane transporter activity

anion exchanger activity

integral to membrane

 
235259_at -0.410 3.065 -4.113 8.966e-04 0.062 -0.489 PACRGL PARK2 co-regulated-like 4 20311133 AA398590 4p15.31 Hs.479298 5

binding

 
240289_at -1.199 7.611 -4.112 8.992e-04 0.062 -0.492 LOC100131683 hypothetical protein LOC100131683 4   W86910 4q35.1 Hs.442702      
236192_at -0.397 5.637 -4.111 9.008e-04 0.062 -0.494 HOOK3 hook homolog 3 (Drosophila) 8 42871189 BF447112 8p11.21 Hs.162852 13

cytoplasm

Golgi apparatus

cis-Golgi network

cytoskeleton

microtubule

endosome organization

lysosome organization

microtubule binding

endosome to lysosome transport

protein transport

HOPS complex

cytoplasmic microtubule organization

identical protein binding

early endosome to late endosome transport

Golgi localization

FHF complex

 
226064_s_at 0.608 5.869 4.110 9.016e-04 0.062 -0.494 DGAT2 diacylglycerol O-acyltransferase homolog 2 (mouse) 11 75157425 AW469523 11q13.5 Hs.334305 16

2-acylglycerol O-acyltransferase activity

diacylglycerol O-acyltransferase activity

membrane fraction

endoplasmic reticulum

glycerol metabolic process

acyltransferase activity

lipid biosynthetic process

membrane

integral to membrane

transferase activity

triglyceride biosynthetic process

Glycerolipid metabolism

Retinol metabolism

Metabolic pathways

224932_at 0.591 11.130 4.110 9.019e-04 0.062 -0.495 CHCHD10 coiled-coil-helix-coiled-coil-helix domain containing 10 22 -22438020 AI814909 22q11.23 Hs.66915 2

mitochondrion

 
226648_at -0.539 6.811 -4.110 9.020e-04 0.062 -0.495 HIF1AN hypoxia inducible factor 1, alpha subunit inhibitor 10 102285630 AI769745 10q24 Hs.500788 30

peptide-aspartate beta-dioxygenase activity

iron ion binding

protein binding

nucleus

oxidoreductase activity

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

regulation of transcription

metal ion binding

oxidation reduction

 
241458_at -0.372 4.612 -4.109 9.040e-04 0.062 -0.497 SETD2 SET domain containing 2 3 -47032903 AI868267 3p21.31 Hs.517941 18

DNA binding

protein binding

nucleus

methyltransferase activity

oxidoreductase activity

chromatin modification

transferase activity

histone-lysine N-methyltransferase activity

regulation of transcription

transition metal ion binding

Lysine degradation

33850_at -0.445 8.659 -4.109 9.043e-04 0.062 -0.497 MAP4 microtubule-associated protein 4 3 -47989573, -47867183, -47867183 W28892 3p21 Hs.517949 40

structural molecule activity

protein binding

microtubule

microtubule associated complex

negative regulation of microtubule depolymerization

 
221994_at -0.743 12.166 -4.108 9.057e-04 0.062 -0.499 PDLIM5 PDZ and LIM domain 5 4 95592060, 95592060 AA196325 4q22 Hs.480311 34

actin binding

protein kinase C binding

protein binding

membrane fraction

cytosol

zinc ion binding

actin cytoskeleton

Z disc

actinin binding

metal ion binding

 
200650_s_at -1.054 12.298 -4.108 9.066e-04 0.062 -0.499 LDHA lactate dehydrogenase A 11 18372511 NM_005566 11p15.4 Hs.2795 46

L-lactate dehydrogenase activity

protein binding

cytoplasm

cytosol

oxidoreductase activity

anaerobic glycolysis

cellular carbohydrate metabolic process

oxidation reduction

Glycolysis / Gluconeogenesis

Cysteine and methionine metabolism

Pyruvate metabolism

Propanoate metabolism

Metabolic pathways

227289_at 0.652 4.851 4.106 9.090e-04 0.063 -0.502 PCDH17 protocadherin 17 13 57103789 AU119437 13q21.1 Hs.106511 11

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

 
239288_at -1.380 6.386 -4.106 9.105e-04 0.063 -0.503 TNIK TRAF2 and NCK interacting kinase 3 -172547417, -172262985 BF431017 3q26.2-q26.31 Hs.34024 14

nucleotide binding

protein serine/threonine kinase activity

protein serine/threonine kinase activity

small GTPase regulator activity

protein binding

ATP binding

cellular_component

protein amino acid phosphorylation

response to stress

protein kinase cascade

JNK cascade

transferase activity

 
203477_at 0.688 9.302 4.105 9.123e-04 0.063 -0.505 COL15A1 collagen, type XV, alpha 1 9 100745958 NM_001855 9q21-q22 Hs.409034 18

angiogenesis

extracellular matrix structural constituent

protein binding

extracellular region

proteinaceous extracellular matrix

collagen type XV

cell adhesion

multicellular organismal development

cell differentiation

 
222679_s_at -0.814 5.615 -4.104 9.129e-04 0.063 -0.506 DCUN1D1 DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) 3 -184143252 AW468880 3q26.3 Hs.715661 16

molecular_function

cellular_component

biological_process

modification-dependent protein catabolic process

 
212543_at 0.526 4.207 4.103 9.156e-04 0.063 -0.509 AIM1 absent in melanoma 1 6 107066422 U83115 6q21 Hs.643590 Hs.717199 12

molecular_function

sugar binding

cellular_component

biological_process

 
58696_at 0.482 7.082 4.103 9.157e-04 0.063 -0.509 EXOSC4 exosome component 4 8 145205509 AL039469 8q24.3 Hs.632041 16

3'-5'-exoribonuclease activity

exosome (RNase complex)

RNA binding

exonuclease activity

protein binding

nucleus

nucleolus

cytoplasm

rRNA processing

RNA processing

hydrolase activity

RNA degradation

218235_s_at -0.666 10.276 -4.103 9.163e-04 0.063 -0.509 UTP11L UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast) 1 38250970 NM_016037 1p34.3 Hs.472038 Hs.637686 11

protein binding

extracellular space

nucleus

nucleolus

cytoplasm

rRNA processing

induction of apoptosis

nervous system development

small-subunit processome

nerve growth factor receptor signaling pathway

 
225564_at 0.545 5.002 4.102 9.181e-04 0.063 -0.511 SPATA13 spermatogenesis associated 13 13 23632886 AW269397 13q12.12 Hs.657121 7

Rho guanyl-nucleotide exchange factor activity

intracellular

regulation of Rho protein signal transduction

 
213955_at -1.018 10.162 -4.100 9.219e-04 0.063 -0.515 MYOZ3 myozenin 3 5 150020596 BE673151 5q33.1 Hs.91626 7

protein binding

cytoplasm

Z disc

 
201366_at -0.559 9.200 -4.099 9.232e-04 0.063 -0.516 ANXA7 annexin A7 10 -74805194 NM_004034 10q21.1-q21.2 Hs.631827 24

calcium ion binding

calcium-dependent phospholipid binding

calcium-dependent protein binding

 
225402_at -0.684 4.989 -4.094 9.330e-04 0.063 -0.526 TP53RK TP53 regulating kinase 20 -44746410 BG339450 20q13.2 Hs.440263 12

nucleotide binding

p53 binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

ATP binding

nucleus

protein amino acid phosphorylation

transferase activity

 
226066_at -0.504 8.536 -4.094 9.332e-04 0.063 -0.526 MITF microphthalmia-associated transcription factor 3 69871322, 69895651, 69998131, 70010945, 70068442 AL117653 3p14.2-p14.1 Hs.166017 Hs.618266 93

DNA binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

transcription activator activity

transcription activator activity

melanocyte differentiation

Melanogenesis

Pathways in cancer

Melanoma

1564063_a_at -0.359 5.207 -4.093 9.342e-04 0.063 -0.527 ATP11B ATPase, class VI, type 11B 3 183993984 AK093727 3q27 Hs.478429 8

nucleotide binding

magnesium ion binding

phospholipid-translocating ATPase activity

ATP binding

nuclear inner membrane

ATP biosynthetic process

ion transport

metabolic process

ion transmembrane transporter activity

ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism

phospholipid transport

aminophospholipid transport

membrane

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

 
217649_at -0.459 3.697 -4.091 9.376e-04 0.063 -0.531 ZFAND5 zinc finger, AN1-type domain 5 9 -74156160 AV702306 9q13-q21 Hs.406096 6

in utero embryonic development

vasculature development

respiratory system process

molecular_function

DNA binding

cellular_component

biological_process

zinc ion binding

fibroblast migration

metal ion binding

platelet-derived growth factor receptor signaling pathway

skeletal system morphogenesis

smooth muscle tissue development

face development

 
205444_at -1.938 10.528 -4.090 9.405e-04 0.063 -0.534 ATP2A1 ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 16 28797309 NM_004320 16p12.1 Hs.657344 41

nucleotide binding

magnesium ion binding

calcium-transporting ATPase activity

calcium ion binding

protein binding

ATP binding

microsome

ATP biosynthetic process

cation transport

metabolic process

apoptotic mitochondrial changes

membrane

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

positive regulation of fast-twitch skeletal muscle fiber contraction

elevation of endoplasmic reticulum calcium ion concentration

reduction of endoplasmic reticulum calcium ion concentration

sarcoplasmic reticulum membrane

sarcoplasmic reticulum membrane

calcium channel complex

response to endoplasmic reticulum stress

protein homodimerization activity

elevation of mitochondrial calcium ion concentration

maintenance of mitochondrion location

apoptosis in response to endoplasmic reticulum stress

calcium ion import

Calcium signaling pathway

Alzheimer's disease

204264_at 0.769 7.437 4.090 9.407e-04 0.063 -0.534 CPT2 carnitine palmitoyltransferase 2 1 53434688 NM_000098 1p32 Hs.713535 53

carnitine O-palmitoyltransferase activity

carnitine O-palmitoyltransferase activity

mitochondrion

mitochondrial inner membrane

mitochondrial inner membrane

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

transport

carnitine shuttle

acyltransferase activity

membrane

transferase activity

regulation of fatty acid oxidation

Fatty acid metabolism

PPAR signaling pathway

209545_s_at 0.367 5.602 4.089 9.415e-04 0.063 -0.535 RIPK2 receptor-interacting serine-threonine kinase 2 8 90839109 AF064824 8q21 Hs.103755 52

nucleotide binding

protein serine/threonine kinase activity

protein serine/threonine kinase activity

signal transducer activity

protein binding

ATP binding

intracellular

cytoplasm

cytosol

protein amino acid phosphorylation

inflammatory response

signal transduction

transferase activity

LIM domain binding

positive regulation of interleukin-6 production

positive regulation of tumor necrosis factor production

positive regulation of stress-activated MAPK cascade

toll-like receptor 2 signaling pathway

T cell proliferation

positive regulation of apoptosis

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of JNK cascade

CARD domain binding

defense response to Gram-positive bacterium

positive regulation of NF-kappaB transcription factor activity

positive regulation of ERK1 and ERK2 cascade

Neurotrophin signaling pathway

208936_x_at 0.468 6.008 4.088 9.437e-04 0.064 -0.537 LGALS8 lectin, galactoside-binding, soluble, 8 1 234748187, 234753361, 234753699 AF074000 1q42-q43 Hs.4082 Hs.708114 29

sugar binding

extracellular space

cytoplasm

 
1552791_a_at -1.566 9.065 -4.087 9.463e-04 0.064 -0.539 TRDN triadin 6 -123579181 NM_006073 6q22-q23 Hs.654601 19

receptor binding

cytoplasm

plasma membrane

muscle contraction

integral to membrane

sarcoplasmic reticulum

 
209604_s_at 0.479 5.927 4.086 9.484e-04 0.064 -0.541 GATA3 GATA binding protein 3 10 8136672 BC003070 10p15 Hs.524134 92

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

defense response

transcription factor binding

zinc ion binding

anatomical structure morphogenesis

sequence-specific DNA binding

response to estrogen stimulus

metal ion binding

 
228099_at 0.584 6.394 4.085 9.502e-04 0.064 -0.543 ZNF550 zinc finger protein 550 19 -62750154 AI805301 19q13.43 Hs.180257 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
242586_at -0.800 6.623 -4.084 9.510e-04 0.064 -0.544 FSD1L fibronectin type III and SPRY domain containing 1-like 9 107250135, 107250135, 107250145 H07986 9q31 Hs.136901 4

molecular_function

cellular_component

biological_process

 
228070_at -0.585 7.109 -4.084 9.524e-04 0.064 -0.545 PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform 14 -62911107 AI417519 14q23.1 Hs.334868 20

protein phosphatase type 2A complex

protein binding

cytoplasm

signal transduction

protein phosphatase type 2A regulator activity

intracellular membrane-bounded organelle

Wnt signaling pathway

220094_s_at 0.489 8.746 4.082 9.565e-04 0.064 -0.549 CCDC90A coiled-coil domain containing 90A 6 -13898998 NM_022102 6p24.3-p23 Hs.214043 3

mitochondrion

membrane

integral to membrane

 
226117_at 0.877 5.990 4.082 9.565e-04 0.064 -0.549 TIFA TRAF-interacting protein with forkhead-associated domain 4 -113416230 AA195074 4q25 Hs.310640 9

protein binding

I-kappaB kinase/NF-kappaB cascade

 
236972_at -1.204 10.165 -4.081 9.572e-04 0.064 -0.550 TRIM63 tripartite motif-containing 63 1 -26250384 AI351421 1p34-p33 Hs.279709 20

ubiquitin-protein ligase activity

signal transducer activity

protein binding

intracellular

nucleus

cytoplasm

cytoplasm

microtubule

muscle contraction

signal transduction

zinc ion binding

ligase activity

modification-dependent protein catabolic process

titin binding

proteasomal ubiquitin-dependent protein catabolic process

contractile fiber

metal ion binding

 
218290_at 0.366 8.025 4.079 9.623e-04 0.064 -0.555 PLEKHJ1 pleckstrin homology domain containing, family J member 1 19 -2184154 NM_018049 19p13.3 Hs.501353 5

protein binding

 
231966_at -0.419 4.126 -4.075 9.686e-04 0.064 -0.561 PPP1R9A protein phosphatase 1, regulatory (inhibitor) subunit 9A 7 94374884 AB033048 7q21.3 Hs.21816 12

actin binding

protein binding

cytoplasm

cytoskeleton

actin filament organization

multicellular organismal development

nervous system development

synaptosome

cell junction

cell differentiation

filopodium

cortical actin cytoskeleton

dendritic spine

synapse

 
205583_s_at -0.516 7.057 -4.075 9.691e-04 0.064 -0.562 ALG13 asparagine-linked glycosylation 13 homolog (S. cerevisiae) X 110811068 NM_024810 Xq23 Hs.443061 14

N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity

endoplasmic reticulum

carbohydrate metabolic process

transferase activity, transferring hexosyl groups

carbohydrate binding

lipid glycosylation

N-Glycan biosynthesis

Metabolic pathways

206314_at 0.479 4.170 4.074 9.704e-04 0.064 -0.563 ZNF167 zinc finger protein 167 3 44571716, 44571716 NM_018651 3p22.3-p21.1 Hs.529512 Hs.696570 7

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
222885_at 0.466 8.351 4.072 9.750e-04 0.064 -0.567 EMCN endomucin 4 -101535522 AF205940 4q24 Hs.152913 12

extracellular region

plasma membrane

integral to membrane

 
1556554_at 0.391 5.834 4.069 9.814e-04 0.065 -0.573 TRIM50 tripartite motif-containing 50 7 -72364470 AK057366 7q11.23 Hs.647053 4

protein binding

intracellular

cytoplasm

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
208353_x_at 0.518 10.860 4.069 9.816e-04 0.065 -0.573 ANK1 ankyrin 1, erythrocytic 8 -41629901, -41629901, -41629900 NM_020480 8p11.1 Hs.654438 Hs.667377 49

structural constituent of cytoskeleton

cytoplasm

plasma membrane

exocytosis

cytoskeleton organization

signal transduction

cytoskeletal adaptor activity

spectrin-associated cytoskeleton

basolateral plasma membrane

sarcoplasmic reticulum

enzyme binding

spectrin binding

M band

maintenance of epithelial cell apical/basal polarity

 
225225_at -0.380 10.855 -4.068 9.832e-04 0.065 -0.575 LOC729082 hypothetical protein LOC729082 15 39363492 BF791544 15q15.1 Hs.380164 2    
217908_s_at -0.532 11.028 -4.068 9.834e-04 0.065 -0.575 DCAF6 DDB1 and CUL4 associated factor 6 1 166172531 NM_018442 1q24.2 Hs.435741 10

nucleus

ligand-dependent nuclear receptor transcription coactivator activity

 
229985_at 0.827 7.367 4.067 9.862e-04 0.065 -0.578 BTNL9 butyrophilin-like 9 5 180399830 AI912653 5q35.3 Hs.546502 4

membrane

integral to membrane

 
227271_at 0.588 6.348 4.066 9.869e-04 0.065 -0.578 FGF11 fibroblast growth factor 11 17 7283412 AU151265 17p13.1 Hs.655193 7

signal transduction

cell-cell signaling

nervous system development

growth factor activity

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

228438_at 0.882 3.703 4.065 9.893e-04 0.065 -0.581 LOC100132891 hypothetical protein LOC100132891 8   AI948599 8q13.3 Hs.137674      
229052_at -0.583 11.505 -4.065 9.899e-04 0.065 -0.581 ANKRD23 ankyrin repeat domain 23 2 -96867377 AI637712 2q11.2 Hs.643430 8

nucleus

 
203208_s_at -0.376 7.452 -4.061 9.976e-04 0.065 -0.588 MTFR1 mitochondrial fission regulator 1 8 66719441, 66719441, 66744661 NM_014637 8q13.1 Hs.584788 8

mitochondrion

plasma membrane

 
206014_at -0.285 6.076 -4.059 1.002e-03 0.065 -0.592 ACTL6B actin-like 6B 7 -100078661 NM_016188 7q22 Hs.259831 12

structural constituent of cytoskeleton

protein binding

ATP binding

nucleus

SWI/SNF complex

chromatin modification

regulation of transcription

 
217957_at 0.549 8.066 4.058 1.004e-03 0.065 -0.594 C16orf80 chromosome 16 open reading frame 80 16 -56704997 NM_013242 16q21 Hs.532755 3

multicellular organismal development

 
212998_x_at 1.038 5.689 4.057 1.006e-03 0.065 -0.596 HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 6 -32735634 AI583173 6p21.3 Hs.409934 Hs.534322 Hs.713773 998

antigen processing and presentation of peptide or polysaccharide antigen via MHC class II

plasma membrane

immune response

immune response

membrane

membrane

integral to membrane

MHC class II receptor activity

MHC class II protein complex

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

223369_at 0.431 8.079 4.057 1.006e-03 0.065 -0.596 METTL11A methyltransferase like 11A 9 131428255 BC001396 9q34.11 Hs.522433 5

protein binding

methyltransferase activity

transferase activity

 
203773_x_at 0.408 8.645 4.053 1.013e-03 0.065 -0.603 BLVRA biliverdin reductase A 7 43764796 NM_000712 7p14-cen Hs.488143 17

biliverdin reductase activity

binding

cytoplasm

zinc ion binding

oxidoreductase activity

heme catabolic process

metal ion binding

oxidation reduction

Porphyrin and chlorophyll metabolism

205202_at -0.533 10.257 -4.052 1.016e-03 0.066 -0.605 PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 6 150112523 NM_005389 6q24-q25 Hs.279257 25

protein-L-isoaspartate (D-aspartate) O-methyltransferase activity

cellular_component

cytoplasm

endoplasmic reticulum

protein modification process

protein amino acid methylation

methyltransferase activity

transferase activity

protein repair

identical protein binding

 
1555522_s_at -0.546 7.572 -4.050 1.020e-03 0.066 -0.609 MEMO1 mediator of cell motility 1 2 -31946398, -31946397 BC036262 2p22-p21 Hs.444969 10

nucleus

cytosol

 
218270_at 0.412 9.273 4.048 1.025e-03 0.066 -0.614 MRPL24 mitochondrial ribosomal protein L24 1 -154973717 NM_024540 1q21-q22 Hs.418233 9

structural constituent of ribosome

intracellular

mitochondrion

ribosome

translation

 
211564_s_at 0.428 4.327 4.047 1.027e-03 0.066 -0.616 PDLIM4 PDZ and LIM domain 4 5 131621249 BC003096 5q31.1 Hs.424312 20

protein binding

zinc ion binding

metal ion binding

 
1566860_at -0.420 2.619 -4.045 1.031e-03 0.066 -0.619 LOC145663 hypothetical protein LOC145663 15   AK056979 15q15.1 Hs.75335 1    
212832_s_at -0.312 7.957 -4.044 1.033e-03 0.066 -0.621 CKAP5 cytoskeleton associated protein 5 11 -46721659 AI143124 11p11.2 Hs.201253 16

gamma-tubulin complex

protein binding

centrosome

cell cycle

mitosis

microtubule cytoskeleton

establishment or maintenance of microtubule cytoskeleton polarity

RNA transport

centrosome organization

spindle pole body organization

cell division

 
222589_at -0.504 6.459 -4.043 1.036e-03 0.066 -0.623 NLK nemo-like kinase 17 23393814 AI967933 17q11.2 Hs.208759 24

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

MAP kinase activity

ATP binding

nucleus

nucleolus

cytoplasm

transforming growth factor beta receptor signaling pathway

protein kinase cascade

transcription factor binding

transferase activity

peptidyl-threonine phosphorylation

negative regulation of Wnt receptor signaling pathway

ubiquitin protein ligase binding

serine phosphorylation of STAT3 protein

SH2 domain binding

regulation of transcription

protein amino acid autophosphorylation

MAPK signaling pathway

Wnt signaling pathway

Adherens junction

211729_x_at 0.398 8.716 4.041 1.038e-03 0.066 -0.626 BLVRA biliverdin reductase A 7 43764796 BC005902 7p14-cen Hs.488143 17

biliverdin reductase activity

binding

cytoplasm

zinc ion binding

oxidoreductase activity

heme catabolic process

metal ion binding

oxidation reduction

Porphyrin and chlorophyll metabolism

226982_at -0.747 5.535 -4.041 1.040e-03 0.066 -0.627 ELL2 elongation factor, RNA polymerase II, 2 5 -95246557 AI745624 5q15 Hs.192221 Hs.708710 6

RNA polymerase II transcription factor activity

nucleus

RNA elongation from RNA polymerase II promoter

transcription elongation factor complex

RNA polymerase II transcription elongation factor activity

regulation of transcription

 
213592_at 0.696 6.462 4.040 1.041e-03 0.066 -0.628 APLNR apelin receptor 11 -56757629 X89271 11q12 Hs.438311 29

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

Neuroactive ligand-receptor interaction

205874_at 0.468 5.142 4.038 1.045e-03 0.066 -0.631 ITPKA inositol 1,4,5-trisphosphate 3-kinase A 15 39573413 NM_002220 15q14-q21 Hs.2722 18

nucleotide binding

calmodulin binding

ATP binding

inositol metabolic process

signal transduction

inositol trisphosphate 3-kinase activity

kinase activity

transferase activity

Inositol phosphate metabolism

Metabolic pathways

Calcium signaling pathway

Phosphatidylinositol signaling system

201121_s_at 0.521 7.839 4.038 1.046e-03 0.066 -0.633 PGRMC1 progesterone receptor membrane component 1 X 118254238 NM_006667 Xq22-q24 Hs.90061 26

receptor activity

steroid binding

protein binding

nucleus

nucleolus

endoplasmic reticulum

microsome

cell surface

membrane

integral to membrane

heme binding

 
200608_s_at -0.505 9.185 -4.038 1.046e-03 0.066 -0.633 RAD21 RAD21 homolog (S. pombe) 8 -117927354 NM_006265 8q24 Hs.81848 33

nuclear chromosome

protein binding

nucleus

double-strand break repair

apoptosis

response to DNA damage stimulus

cell cycle

chromosome segregation

mitosis

reciprocal meiotic recombination

cell division

Cell cycle

219520_s_at 0.401 7.080 4.037 1.049e-03 0.066 -0.635 WWC3 WWC family member 3 X 9943794 NM_018458 Xp22.32 Hs.527524 5    
210716_s_at -0.843 7.410 -4.036 1.049e-03 0.066 -0.635 CLIP1 CAP-GLY domain containing linker protein 1 12 -121321933 M97501 12q24.3 Hs.524809 37

kinetochore

nucleic acid binding

protein binding

cytoplasm

endosome

microtubule

intermediate filament

mitosis

microtubule binding

zinc ion binding

protein homodimerization activity

metal ion binding

 
205903_s_at -0.455 4.868 -4.035 1.051e-03 0.066 -0.637 KCNN3 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 1 -152946536, -152946536 NM_002249 1q21.3 Hs.490765 40

ion channel activity

calmodulin binding

ion transport

potassium ion transport

membrane

integral to membrane

small conductance calcium-activated potassium channel activity

 
207612_at 0.397 4.980 4.033 1.056e-03 0.066 -0.641 WNT8B wingless-type MMTV integration site family, member 8B 10 102212801 NM_003393 10q24 Hs.421281 8

signal transducer activity

extracellular region

proteinaceous extracellular matrix

signal transduction

Wnt receptor signaling pathway, calcium modulating pathway

cell-cell signaling

multicellular organismal development

nervous system development

Wnt signaling pathway

Hedgehog signaling pathway

Melanogenesis

Pathways in cancer

Basal cell carcinoma

202133_at 0.829 7.779 4.033 1.056e-03 0.066 -0.641 WWTR1 WW domain containing transcription regulator 1 3 -150720721 BF674349 3q23-q24 Hs.719249 13

negative regulation of transcription from RNA polymerase II promoter

osteoblast differentiation

transcription coactivator activity

transcription corepressor activity

protein binding

nucleus

transcription factor complex

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

transcription regulator activity

glomerulus development

protein homodimerization activity

negative regulation of fat cell differentiation

positive regulation of transcription from RNA polymerase II promoter

cilium morphogenesis

 
224250_s_at -0.599 7.930 -4.033 1.057e-03 0.066 -0.642 SECISBP2 SECIS binding protein 2 9 91123231 BC001189 9q22.2 Hs.59804 20

RNA binding

mRNA 3'-UTR binding

nucleus

translation

 
200733_s_at -0.543 10.246 -4.032 1.059e-03 0.066 -0.644 PTP4A1 protein tyrosine phosphatase type IVA, member 1 6 64339878 U48296 6q12 Hs.227777 Hs.706850 28

protein tyrosine phosphatase activity

cytoplasm

early endosome

endoplasmic reticulum

spindle

plasma membrane

protein amino acid dephosphorylation

cell cycle

multicellular organismal development

hydrolase activity

 
208753_s_at -0.574 8.160 -4.032 1.059e-03 0.066 -0.644 NAP1L1 nucleosome assembly protein 1-like 1 12 -74724938 BC002387 12q21.2 Hs.524599 Hs.695185 17

protein binding

nucleus

chromatin assembly complex

DNA replication

nucleosome assembly

positive regulation of cell proliferation

melanosome

 
1569986_x_at -1.170 11.920 -4.031 1.061e-03 0.066 -0.646 TNNT3 troponin T type 3 (skeletal, fast) 11 1897374 BF789882 11p15.5 Hs.73454 21

skeletal muscle contraction

actin binding

tropomyosin binding

tropomyosin binding

troponin complex

regulation of striated muscle contraction

troponin C binding

calcium-dependent ATPase activity

troponin I binding

regulation of ATPase activity

calcium-dependent protein binding

 
210156_s_at -0.488 9.210 -4.029 1.066e-03 0.066 -0.650 PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 6 150112523 D25547 6q24-q25 Hs.279257 25

protein-L-isoaspartate (D-aspartate) O-methyltransferase activity

cellular_component

cytoplasm

endoplasmic reticulum

protein modification process

protein amino acid methylation

methyltransferase activity

transferase activity

protein repair

identical protein binding

 
207812_s_at -0.565 7.617 -4.028 1.066e-03 0.066 -0.651 GORASP2 golgi reassembly stacking protein 2, 55kDa 2 171493956 NM_015530 2q31.1-q31.2 Hs.431317 16

protein binding

Golgi apparatus

Golgi medial cisterna

Golgi organization

membrane

 
203895_at 0.767 5.013 4.028 1.067e-03 0.066 -0.651 PLCB4 phospholipase C, beta 4 20 9024931 AL535113 20p12 Hs.472101 17

phosphoinositide phospholipase C activity

signal transducer activity

calcium ion binding

protein binding

intracellular signaling cascade

lipid catabolic process

hydrolase activity

Inositol phosphate metabolism

Metabolic pathways

Calcium signaling pathway

Chemokine signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Wnt signaling pathway

Gap junction

Long-term potentiation

Long-term depression

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Huntington's disease

202211_at -0.483 6.940 -4.028 1.067e-03 0.066 -0.651 ARFGAP3 ADP-ribosylation factor GTPase activating protein 3 22 -41522475 BC005122 22q13.2-q13.3 Hs.162877 15

cytoplasm

Golgi apparatus

cytosol

intracellular protein transport

ARF GTPase activator activity

zinc ion binding

protein transporter activity

protein secretion

membrane

vesicle-mediated transport

regulation of ARF GTPase activity

metal ion binding

Endocytosis

217028_at 0.561 3.911 4.028 1.068e-03 0.066 -0.652 CXCR4 chemokine (C-X-C motif) receptor 4 2 -136588388, -136588388 AJ224869 2q21 Hs.593413 604

activation of MAPK activity

response to hypoxia

actin binding

G-protein coupled receptor activity

protein binding

cytoplasm

plasma membrane

integral to plasma membrane

apoptosis

chemotaxis

inflammatory response

immune response

signal transduction

G-protein coupled receptor protein signaling pathway

elevation of cytosolic calcium ion concentration

response to virus

coreceptor activity

C-C chemokine receptor activity

C-X-C chemokine receptor activity

initiation of viral infection

cell leading edge

myosin light chain binding

interspecies interaction between organisms

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

Endocytosis

Axon guidance

Leukocyte transendothelial migration

209139_s_at -0.524 9.622 -4.028 1.068e-03 0.066 -0.652 PRKRA protein kinase, interferon-inducible double stranded RNA dependent activator 2 -179004387, -179004387, -179004387 AF083033 2q31.2 Hs.570274 27

double-stranded RNA binding

protein binding

intracellular

cytoplasm

protein amino acid phosphorylation

induction of apoptosis

response to stress

immune response

enzyme activator activity

negative regulation of cell proliferation

response to virus

RNA interference, production of siRNA

gene silencing by RNA

outer ear morphogenesis

middle ear morphogenesis

protein homodimerization activity

perinuclear region of cytoplasm

skeletal system morphogenesis

 
227674_at 0.522 5.421 4.026 1.071e-03 0.067 -0.655 ZNF585A zinc finger protein 585A 19 -42332840, -42332840 AA910852 19q13.12 Hs.390568 Hs.659236 3

nucleic acid binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
226459_at 0.551 4.705 4.025 1.074e-03 0.067 -0.657 PIK3AP1 phosphoinositide-3-kinase adaptor protein 1 10 -98343058 AW575754 10q24.1 Hs.310456 9

transmembrane receptor protein tyrosine kinase signaling protein activity

protein binding

cytoplasm

plasma membrane

B cell receptor signaling pathway

235374_at 0.491 7.590 4.025 1.075e-03 0.067 -0.658 MDH1 malate dehydrogenase 1, NAD (soluble) 2 63669625 AW952547 2p13.3 Hs.526521 18

malic enzyme activity

binding

soluble fraction

cytoplasm

cytosol

cytosol

glycolysis

tricarboxylic acid cycle

oxaloacetate metabolic process

malate metabolic process

oxidoreductase activity

NAD metabolic process

L-malate dehydrogenase activity

L-malate dehydrogenase activity

cellular carbohydrate metabolic process

NAD or NADH binding

oxidation reduction

Citrate cycle (TCA cycle)

Pyruvate metabolism

Glyoxylate and dicarboxylate metabolism

Carbon fixation in photosynthetic organisms

Reductive carboxylate cycle (CO2 fixation)

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

240381_at 0.406 5.864 4.023 1.078e-03 0.067 -0.660 ZBED5 zinc finger, BED-type containing 5 11 -10830829 AA813103 11p15.3 Hs.655066 5

DNA binding

zinc ion binding

metal ion binding

 
231987_at 0.440 6.030 4.020 1.084e-03 0.067 -0.666 LOC728264 hypothetical LOC728264 5 148766632 AW081196 5q32 Hs.519666 1    
1560238_at 0.910 4.247 4.020 1.086e-03 0.067 -0.667 LOC100127980 hypothetical protein LOC100127980 19   BM926839 19q13.12 Hs.595153 1    
230040_at 0.854 3.671 4.019 1.087e-03 0.067 -0.669 ADAMTS18 ADAM metallopeptidase with thrombospondin type 1 motif, 18 16 -75873525 AI733120 16q23 Hs.188746 9

metalloendopeptidase activity

extracellular region

proteinaceous extracellular matrix

proteolysis

peptidase activity

zinc ion binding

metal ion binding

 
217979_at 0.674 7.237 4.018 1.089e-03 0.067 -0.670 TSPAN13 tetraspanin 13 7 16759875 NM_014399 7p21.1 Hs.364544 14

membrane fraction

integral to plasma membrane

membrane

 
212566_at -0.444 10.545 -4.017 1.091e-03 0.067 -0.672 MAP4 microtubule-associated protein 4 3 -47989573, -47867183, -47867183 AL523310 3p21 Hs.517949 40

structural molecule activity

protein binding

microtubule

microtubule associated complex

negative regulation of microtubule depolymerization

 
213530_at -0.327 6.840 -4.014 1.098e-03 0.067 -0.678 RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 2 135526322 AI040009 2q21.3 Hs.306327 17

GTPase activator activity

Rab GTPase activator activity

soluble fraction

cytoplasm

Rab GTPase binding

regulation of GTPase activity

 
208857_s_at -0.454 10.307 -4.013 1.100e-03 0.067 -0.680 PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 6 150112523 M93008 6q24-q25 Hs.279257 25

protein-L-isoaspartate (D-aspartate) O-methyltransferase activity

cellular_component

cytoplasm

endoplasmic reticulum

protein modification process

protein amino acid methylation

methyltransferase activity

transferase activity

protein repair

identical protein binding

 
240883_at -0.679 3.356 -4.013 1.101e-03 0.067 -0.680 PFKFB1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 X -54976314 AA702810 Xp11.21 Hs.444304 11

nucleotide binding

6-phosphofructo-2-kinase activity

6-phosphofructo-2-kinase activity

fructose-2,6-bisphosphate 2-phosphatase activity

fructose-2,6-bisphosphate 2-phosphatase activity

ATP binding

cytosol

fructose 2,6-bisphosphate metabolic process

gluconeogenesis

glycolysis

protein kinase cascade

metabolic process

kinase activity

transferase activity

hydrolase activity

identical protein binding

6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 complex

Fructose and mannose metabolism

208617_s_at -0.793 10.462 -4.012 1.102e-03 0.067 -0.681 PTP4A2 protein tyrosine phosphatase type IVA, member 2 1 -32146379 AF208850 1p35 Hs.470477 Hs.712749 Hs.713025 21

prenylated protein tyrosine phosphatase activity

protein binding

cytoplasm

early endosome

plasma membrane

protein amino acid dephosphorylation

hydrolase activity

 
205489_at 2.200 7.246 4.010 1.107e-03 0.068 -0.686 CRYM crystallin, mu 16 -21177342, -21177342 NM_001888 16p13.11-p12.3 Hs.924 17

negative regulation of transcription from RNA polymerase II promoter

transcription corepressor activity

catalytic activity

cytoplasm

sensory perception of sound

metabolic process

thyroid hormone metabolic process

protein homodimerization activity

NADP or NADPH binding

thyroid hormone binding

thyroid hormone binding

thyroid hormone transport

 
212470_at -0.502 8.166 -4.010 1.107e-03 0.068 -0.686 SPAG9 sperm associated antigen 9 17 -46394534 AB011088 17q21.33 Hs.463439 22

acrosomal vesicle

protein binding

cytoplasm

spermatogenesis

integral to membrane

positive regulation of cell migration

perinuclear region of cytoplasm

 
212588_at 0.684 4.854 4.009 1.110e-03 0.068 -0.688 PTPRC protein tyrosine phosphatase, receptor type, C 1 196874759, 196874759 Y00062 1q31-q32 Hs.654514 174

negative regulation of T cell mediated cytotoxicity

negative regulation of cytokine-mediated signaling pathway

immunoglobulin biosynthetic process

transmembrane receptor protein tyrosine phosphatase activity

protein binding

plasma membrane

integral to plasma membrane

focal adhesion

negative regulation of protein kinase activity

negative regulation of protein kinase activity

protein amino acid dephosphorylation

cell surface receptor linked signal transduction

hydrolase activity

protein kinase binding

T cell differentiation

positive regulation of B cell proliferation

regulation of S phase

positive regulation of T cell proliferation

positive regulation of protein kinase activity

T cell receptor signaling pathway

B cell receptor signaling pathway

positive regulation of antigen receptor-mediated signaling pathway

release of sequestered calcium ion into cytosol

defense response to virus

regulation of cell cycle

Cell adhesion molecules (CAMs)

T cell receptor signaling pathway

Fc gamma R-mediated phagocytosis

Primary immunodeficiency

203909_at -0.535 6.966 -4.009 1.110e-03 0.068 -0.688 SLC9A6 solute carrier family 9 (sodium/hydrogen exchanger), member 6 X 134895251 NM_006359 Xq26.3 Hs.62185 11

mitochondrion

endosome

endoplasmic reticulum membrane

microsome

plasma membrane

cation transport

sodium ion transport

regulation of pH

antiporter activity

solute:hydrogen antiporter activity

sodium:hydrogen antiporter activity

integral to membrane

sodium ion binding

early endosome membrane

recycling endosome membrane

Cardiac muscle contraction

212010_s_at -0.500 10.577 -4.008 1.113e-03 0.068 -0.690 CDV3 CDV3 homolog (mouse) 3 134775123, 134775990 AK025647 3q22.1 Hs.518265 11

molecular_function

cellular_component

cytoplasm

cell proliferation

 
202144_s_at -0.612 9.944 -4.007 1.114e-03 0.068 -0.691 ADSL adenylosuccinate lyase 22 39072449 NM_000026 22q13.1 22q13.2 Hs.75527 29

N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity

N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity

cytoplasm

cytosol

AMP biosynthetic process

purine ribonucleotide biosynthetic process

lyase activity

protein tetramerization

(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity

Purine metabolism

Alanine, aspartate and glutamate metabolism

Biosynthesis of alkaloids derived from histidine and purine

Metabolic pathways

229291_at 0.370 5.712 4.007 1.115e-03 0.068 -0.692 RBM15 RNA binding motif protein 15 1 110683467 AI743545 1p13 Hs.435947 Hs.708172 13

nucleotide binding

RNA binding

protein binding

nucleus

negative regulation of transcription

interspecies interaction between organisms

 
209029_at -0.430 7.786 -4.005 1.119e-03 0.068 -0.695 COPS7A COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis) 12 6703410, 6703440, 6703505, 6703709 AF193844 12p13.31 Hs.530823 16

nucleus

cytoplasm

signalosome

 
227539_at -1.008 5.704 -4.004 1.122e-03 0.068 -0.698 GNA13 guanine nucleotide binding protein (G protein), alpha 13 17 -60435870 AW298099 17q24.3 Hs.515018 57

nucleotide binding

patterning of blood vessels

in utero embryonic development

GTPase activity

signal transducer activity

protein binding

GTP binding

cell motion

signal transduction

G-protein coupled receptor protein signaling pathway

protein kinase cascade

Rho protein signal transduction

regulation of cell shape

membrane

guanyl nucleotide binding

cell differentiation

platelet activation

regulation of cell migration

melanosome

Vascular smooth muscle contraction

Long-term depression

Regulation of actin cytoskeleton

228875_at 0.446 6.836 4.003 1.123e-03 0.068 -0.699 FAM162B family with sequence similarity 162, member B 6 -117180053 AI540210 6q22.1 Hs.126712 4

membrane

integral to membrane

 
200684_s_at -0.577 6.645 -4.002 1.125e-03 0.068 -0.700 UBE2L3 ubiquitin-conjugating enzyme E2L 3 22 20251956 AI819709 22q11.21 Hs.108104 Hs.603229 Hs.715088 38

ubiquitin ligase complex

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

cytoplasm

ubiquitin-dependent protein catabolic process

protein ubiquitination

ligase activity

enzyme binding

regulation of protein metabolic process

Ubiquitin mediated proteolysis

Parkinson's disease

217932_at 0.396 9.370 4.002 1.126e-03 0.068 -0.701 MRPS7 mitochondrial ribosomal protein S7 17 70769343 NM_015971 17q25 Hs.71787 13

RNA binding

structural constituent of ribosome

protein binding

intracellular

mitochondrion

ribosome

translation

cytosolic small ribosomal subunit

 
201380_at -0.465 5.827 -4.001 1.128e-03 0.068 -0.702 CRTAP cartilage associated protein 3 33130453 NM_006371 3p22.3 Hs.719160 10

extracellular region

proteinaceous extracellular matrix

 
213188_s_at -0.597 7.334 -4.000 1.130e-03 0.068 -0.704 MINA MYC induced nuclear antigen 3 -99143350, -99143350 AI823896 3q11.2 Hs.607776 15

nucleus

nucleolus

cytoplasm

ribosome biogenesis

 
217725_x_at -0.742 8.721 -4.000 1.130e-03 0.068 -0.705 SERBP1 SERPINE1 mRNA binding protein 1 1 -67646080 NM_015640 1p31 Hs.719078 22

RNA binding

mRNA 3'-UTR binding

protein binding

nucleus

cytoplasm

regulation of mRNA stability

perinuclear region of cytoplasm

 
203065_s_at 0.776 9.957 3.999 1.132e-03 0.068 -0.706 CAV1 caveolin 1, caveolae protein, 22kDa 7 115952074 NM_001753 7q31.1 Hs.74034 318

Golgi membrane

Golgi membrane

inactivation of MAPK activity

vasculogenesis

response to hypoxia

negative regulation of endothelial cell proliferation

intracellular

endoplasmic reticulum

Golgi apparatus

lipid particle

plasma membrane

caveola

triglyceride metabolic process

calcium ion transport

endocytosis

regulation of smooth muscle contraction

skeletal muscle tissue development

protein localization

positive regulation of calcium ion transport into cytosol

cholesterol binding

integral to membrane

vesicle organization

peptidase activator activity

regulation of fatty acid metabolic process

lipid storage

regulation of blood coagulation

cholesterol transport

negative regulation of epithelial cell differentiation

mammary gland development

maintenance of protein location in cell

response to progesterone stimulus

protein complex scaffold

nitric oxide homeostasis

cholesterol homeostasis

negative regulation of MAPKKK cascade

response to estrogen stimulus

interspecies interaction between organisms

negative regulation of nitric oxide biosynthetic process

positive regulation of vasoconstriction

negative regulation of vasodilation

negative regulation of JAK-STAT cascade

perinuclear region of cytoplasm

positive regulation of metalloenzyme activity

nitric-oxide synthase binding

protein homooligomerization

cytosolic calcium ion homeostasis

response to calcium ion

membrane depolarization

regulation of peptidase activity

mammary gland involution

Focal adhesion

218215_s_at -0.453 6.227 -3.999 1.132e-03 0.068 -0.706 NR1H2 nuclear receptor subfamily 1, group H, member 2 19 55571496 NM_007121 19q13.3-q13.3 Hs.432976 62

transcription factor activity

steroid hormone receptor activity

protein binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

zinc ion binding

positive regulation of specific transcription from RNA polymerase II promoter

negative regulation of foam cell differentiation

positive regulation of triglyceride biosynthetic process

positive regulation of cholesterol efflux

negative regulation of cholesterol storage

negative regulation of transcription

positive regulation of cellular protein metabolic process

negative regulation of lipid transport

sequence-specific DNA binding

cellular lipid metabolic process

positive regulation of fatty acid biosynthetic process

metal ion binding

negative regulation of pinocytosis

positive regulation of lipoprotein lipase activity

 
235176_at 0.399 4.461 3.998 1.136e-03 0.068 -0.709 ZFP82 zinc finger protein 82 homolog (mouse) 19 -41574700 AA927918 19q13.12 Hs.558734 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
219396_s_at 0.328 6.138 3.995 1.141e-03 0.068 -0.714 NEIL1 nei endonuclease VIII-like 1 (E. coli) 15 73426383 NM_024608 15q24.2 Hs.512732 35

damaged DNA binding

DNA-(apurinic or apyrimidinic site) lyase activity

nucleus

cytoplasm

base-excision repair

nucleotide-excision repair

response to DNA damage stimulus

response to oxidative stress

protein C-terminus binding

metabolic process

zinc ion binding

lyase activity

DNA N-glycosylase activity

negative regulation of nuclease activity

Base excision repair

224752_at -0.304 9.383 -3.995 1.143e-03 0.068 -0.715 PL-5283 PL-5283 protein 7 134997760 BG031051 7q33 Hs.200022 3    
218856_at 0.575 5.906 3.992 1.149e-03 0.069 -0.720 TNFRSF21 tumor necrosis factor receptor superfamily, member 21 6 -47307226 NM_016629 6p21.1-p12.2 Hs.443577 15

receptor activity

protein binding

apoptosis

signal transduction

membrane

integral to membrane

Cytokine-cytokine receptor interaction

225665_at -0.492 11.862 -3.987 1.160e-03 0.069 -0.728 ZAK sterile alpha motif and leucine zipper containing kinase AZK 2 173648810, 173648810 AI129320 2q24.2 Hs.444451 24

cell cycle checkpoint

DNA damage checkpoint

nucleotide binding

activation of MAPKK activity

magnesium ion binding

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

protein tyrosine kinase activity

ATP binding

nucleus

cytoplasm

response to stress

cell cycle

cell cycle arrest

protein kinase cascade

activation of JUN kinase activity

cell death

cell proliferation

response to radiation

transferase activity

cell differentiation

identical protein binding

positive regulation of apoptosis

MAPK signaling pathway

Tight junction

203389_at 0.340 5.823 3.987 1.160e-03 0.069 -0.729 KIF3C kinesin family member 3C 2 -26002958 AF035621 2p23 Hs.21611 9

nucleotide binding

microtubule motor activity

ATP binding

kinesin complex

microtubule

microtubule-based movement

 
232119_at -0.861 7.352 -3.987 1.161e-03 0.069 -0.729 SYNPO2 synaptopodin 2 4 120029443, 120029443 BF984227 4q26 Hs.655519 14

actin binding

protein binding

nucleus

cytoplasm

 
226426_at -0.476 6.203 -3.986 1.163e-03 0.069 -0.731 ADNP activity-dependent neuroprotector homeobox 20 -48940289 BG149849 20q13.13 Hs.570355 10

chromatin binding

transcription factor activity

dolichyl-phosphate beta-D-mannosyltransferase activity

protein binding

extracellular space

intracellular

nucleus

nucleolus

regulation of transcription, DNA-dependent

GPI anchor biosynthetic process

zinc ion binding

dolichol metabolic process

negative regulation of neuron apoptosis

sequence-specific DNA binding

metal ion binding

 
214769_at -0.569 8.644 -3.985 1.165e-03 0.069 -0.733 CLCN4 chloride channel 4 X 10084984 AF052117 Xp22.3 Hs.495674 17

nucleotide binding

ion channel activity

voltage-gated chloride channel activity

ATP binding

endosome

ion transport

chloride transport

antiporter activity

membrane

integral to membrane

chloride ion binding

 
201877_s_at -0.481 8.601 -3.985 1.165e-03 0.069 -0.733 PPP2R5C protein phosphatase 2, regulatory subunit B', gamma isoform 14 101297887, 101345892, 101345892 NM_002719 14q32.31 Hs.368264 Hs.719337 37

protein phosphatase type 2A complex

protein binding

nucleus

signal transduction

protein phosphatase type 2A regulator activity

proteasomal ubiquitin-dependent protein catabolic process

Wnt signaling pathway

200818_at 0.352 12.156 3.983 1.170e-03 0.069 -0.737 ATP5O ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit 21 -34197626 NM_001697 21q22.1-q22.2 21q22.11 Hs.409140 12

transporter activity

mitochondrion

mitochondrial proton-transporting ATP synthase complex

mitochondrial proton-transporting ATP synthase complex

plasma membrane

ATP catabolic process

ion transport

drug binding

proton transport

ATPase activity

mitochondrial ATP synthesis coupled proton transport

proton-transporting ATP synthase complex, catalytic core F(1)

hydrogen ion transporting ATP synthase activity, rotational mechanism

proton-transporting ATPase activity, rotational mechanism

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

225425_s_at 0.614 9.587 3.983 1.171e-03 0.069 -0.737 MRPL41 mitochondrial ribosomal protein L41 9 139566129 AV726260 9q34.3 Hs.44017 10

structural constituent of ribosome

mitochondrion

mitochondrial large ribosomal subunit

ribosome

translation

apoptosis

cell cycle

 
226063_at 0.404 5.453 3.982 1.172e-03 0.069 -0.738 VAV2 vav 2 guanine nucleotide exchange factor 9 -135616837 AA481141 9q34.1 Hs.369921 Hs.689325 31

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

protein binding

intracellular

intracellular signaling cascade

zinc ion binding

diacylglycerol binding

regulation of Rho protein signal transduction

metal ion binding

Chemokine signaling pathway

Focal adhesion

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

226582_at 0.560 5.377 3.982 1.174e-03 0.069 -0.740 LOC400043 hypothetical LOC400043 12 52806121 AL520272 12q13.13 Hs.19193 2    
200835_s_at -0.634 8.763 -3.981 1.175e-03 0.069 -0.741 MAP4 microtubule-associated protein 4 3 -47989573, -47867183, -47867183 AI553791 3p21 Hs.517949 40

structural molecule activity

protein binding

microtubule

microtubule associated complex

negative regulation of microtubule depolymerization

 
211656_x_at 0.521 6.352 3.978 1.183e-03 0.069 -0.747 HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 6 -32735634 M32577 6p21.3 Hs.409934 Hs.534322 Hs.713773 998

antigen processing and presentation of peptide or polysaccharide antigen via MHC class II

plasma membrane

immune response

immune response

membrane

membrane

integral to membrane

MHC class II receptor activity

MHC class II protein complex

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

221688_s_at -0.525 8.008 -3.976 1.187e-03 0.070 -0.751 IMP3 IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast) 15 -73718490 AL136913 15q24 Hs.513043 21

protein binding

intracellular

nucleus

nucleolus

rRNA processing

rRNA binding

ribonucleoprotein complex

 
239763_at 0.324 5.742 3.975 1.189e-03 0.070 -0.752 PRDM11 PR domain containing 11 11 45072139 AA157112 11p11 Hs.178715 3    
224583_at 0.628 4.477 3.974 1.191e-03 0.070 -0.753 COTL1 coactosin-like 1 (Dictyostelium) 16 -83156704 AL565621 16q24.1 Hs.289092 18

actin binding

cellular_component

intracellular

cytoplasm

cytoskeleton

biological_process

enzyme binding

defense response to fungus

 
206559_x_at 1.275 11.860 3.971 1.199e-03 0.070 -0.760 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 6 -74282193 NM_001403 6q14.1 Hs.520703 Hs.586423 Hs.644639 Hs.697944 Hs.708256 Hs.713109 86

nucleotide binding

translation elongation factor activity

GTPase activity

protein binding

GTP binding

cytoplasm

cytosol

eukaryotic translation elongation factor 1 complex

translational elongation

translational elongation

 
210024_s_at -0.650 10.303 -3.969 1.204e-03 0.070 -0.764 UBE2E3 ubiquitin-conjugating enzyme E2E 3 (UBC4/5 homolog, yeast) 2 181553356, 181553586 AB017644 2q32.1 Hs.470804 20

nucleotide binding

ubiquitin-protein ligase activity

protein binding

ATP binding

nucleus

cytoplasm

ligase activity

modification-dependent protein catabolic process

regulation of growth

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

201705_at -0.435 9.932 -3.969 1.205e-03 0.070 -0.764 PSMD7 proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 16 72888181 NM_002811 16q23-q24 Hs.440604 47

proteasome complex

protein binding

cytosol

proteasome regulatory particle

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

206895_at -0.861 9.946 -3.966 1.213e-03 0.071 -0.770 PPP1R3A protein phosphatase 1, regulatory (inhibitor) subunit 3A 7 -113304117 NM_002711 7q31.1 Hs.458309 24

carbohydrate metabolic process

glycogen metabolic process

membrane

integral to membrane

Insulin signaling pathway

223519_at -0.748 9.964 -3.965 1.213e-03 0.071 -0.770 ZAK sterile alpha motif and leucine zipper containing kinase AZK 2 173648810, 173648810 AW069181 2q24.2 Hs.444451 24

cell cycle checkpoint

DNA damage checkpoint

nucleotide binding

activation of MAPKK activity

magnesium ion binding

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

protein tyrosine kinase activity

ATP binding

nucleus

cytoplasm

response to stress

cell cycle

cell cycle arrest

protein kinase cascade

activation of JUN kinase activity

cell death

cell proliferation

response to radiation

transferase activity

cell differentiation

identical protein binding

positive regulation of apoptosis

MAPK signaling pathway

Tight junction

229553_at -0.943 6.835 -3.962 1.221e-03 0.071 -0.777 PGM2L1 phosphoglucomutase 2-like 1 11 -73719008 AA736452 11q13.4 Hs.26612 6

carbohydrate metabolic process

glucose metabolic process

transferase activity

isomerase activity

intramolecular transferase activity, phosphotransferases

glucose-1,6-bisphosphate synthase activity

Starch and sucrose metabolism

218373_at -0.515 9.125 -3.958 1.232e-03 0.071 -0.785 AKTIP AKT interacting protein 16 -52082692 NM_022476 16q12.2 Hs.380897 14

protein binding

cytoplasm

plasma membrane

apoptosis

endosome organization

lysosome organization

endosome to lysosome transport

protein transport

small conjugating protein ligase activity

HOPS complex

post-translational protein modification

early endosome to late endosome transport

regulation of protein metabolic process

FHF complex

 
222989_s_at -0.527 7.341 -3.958 1.232e-03 0.071 -0.785 UBQLN1 ubiquilin 1 9 -85464697 NM_013438 9q21.2-q21.3 9q22 Hs.9589 46

nucleus

cytoplasm

cytosol

kinase binding

protein complex

perinuclear region of cytoplasm

 
201799_s_at -0.537 6.906 -3.957 1.233e-03 0.071 -0.786 OSBP oxysterol binding protein 11 -59098446 AI927993 11q12-q13 Hs.597091 13

cytoplasm

Golgi apparatus

lipid transport

oxysterol binding

steroid metabolic process

membrane

 
222985_at -0.347 11.964 -3.957 1.233e-03 0.071 -0.786 YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 7 -75794043 AB024334 7q11.23 Hs.520974 56

protein kinase C binding

insulin-like growth factor receptor binding

cytoplasm

negative regulation of protein kinase activity

protein targeting

protein kinase C inhibitor activity

regulation of signal transduction

protein domain specific binding

regulation of neuron differentiation

regulation of synaptic plasticity

Cell cycle

Neurotrophin signaling pathway

225314_at 0.658 5.913 3.956 1.237e-03 0.071 -0.789 OCIAD2 OCIA domain containing 2 4 -48582161 BG291649 4p11 Hs.95835 2

mitochondrion

mitochondrial inner membrane

endosome

 
200961_at -0.507 8.180 -3.954 1.242e-03 0.071 -0.793 SEPHS2 selenophosphate synthetase 2 16 -30362452 NM_012248 16p11.2 Hs.718460 7

nucleotide binding

selenide, water dikinase activity

ATP binding

cellular_component

selenium binding

selenocysteine biosynthetic process

transferase activity

Selenoamino acid metabolism

Metabolic pathways

209140_x_at 0.682 10.715 3.952 1.248e-03 0.072 -0.796 HLA-B major histocompatibility complex, class I, B 6 -31429627, -2770844, -2569111 L42024 6p21.3 Hs.707171 Hs.77961 1101

antigen processing and presentation of peptide antigen via MHC class I

protein binding

membrane fraction

plasma membrane

integral to plasma membrane

defense response

immune response

immune response

membrane

integral to membrane

antigen processing and presentation

MHC class I receptor activity

MHC class I protein complex

interspecies interaction between organisms

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

210140_at 0.385 5.489 3.949 1.256e-03 0.072 -0.803 CST7 cystatin F (leukocystatin) 20 24877865 AF031824 20p11.21 Hs.143212 17

cysteine-type endopeptidase inhibitor activity

extracellular region

cytoplasm

immune response

 
204311_at 0.379 5.735 3.948 1.256e-03 0.072 -0.803 ATP1B2 ATPase, Na+/K+ transporting, beta 2 polypeptide 17 7494978 NM_001678 17p13.1 Hs.712542 22

sodium:potassium-exchanging ATPase activity

protein binding

ATP biosynthetic process

ion transport

potassium ion transport

sodium ion transport

membrane

integral to membrane

potassium ion binding

sodium ion binding

Cardiac muscle contraction

204838_s_at -0.448 6.456 -3.945 1.264e-03 0.072 -0.809 MLH3 mutL homolog 3 (E. coli) 14 -74550219 NM_014381 14q24.3 Hs.436650 28

satellite DNA binding

protein binding

ATP binding

nucleus

mismatch repair

response to DNA damage stimulus

reciprocal meiotic recombination

mismatched DNA binding

Mismatch repair

229534_at 0.507 4.631 3.944 1.268e-03 0.072 -0.811 ACOT4 acyl-CoA thioesterase 4 14 73128162 AA046424 14q24.3 Hs.49433 10

very-long-chain fatty acid metabolic process

carboxylesterase activity

peroxisome

succinyl-CoA metabolic process

lipid metabolic process

acyl-CoA metabolic process

palmitoyl-CoA hydrolase activity

hydrolase activity

thiolester hydrolase activity

saturated monocarboxylic acid metabolic process

unsaturated monocarboxylic acid metabolic process

butanoic acid metabolic process

dicarboxylic acid metabolic process

Biosynthesis of unsaturated fatty acids

209071_s_at 0.523 10.586 3.944 1.268e-03 0.072 -0.811 RGS5 regulator of G-protein signaling 5 1 -161378720 AF159570 1q23.1 Hs.24950 26

signal transducer activity

GTPase activator activity

regulation of G-protein coupled receptor protein signaling pathway

negative regulation of signal transduction

 
226592_at 0.385 5.056 3.943 1.269e-03 0.072 -0.812 ZNF618 zinc finger protein 618 9 115678382 AA031404 9q32 Hs.349208 2

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

protein dimerization activity

 
231836_at 0.605 5.249 3.943 1.269e-03 0.072 -0.812 HKR1 GLI-Kruppel family member HKR1 19 42517419 BC004513 19q13.12 Hs.657027 8

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

metal ion binding

 
212774_at -0.865 10.201 -3.943 1.270e-03 0.072 -0.813 ZNF238 zinc finger protein 238 1 242281183, 242283204 AJ223321 1q44-qter Hs.69997 11

negative regulation of transcription from RNA polymerase II promoter

nuclear chromosome

transcription factor activity

protein binding

intracellular

nucleus

transport

zinc ion binding

regulation of transcription

metal ion binding

 
227705_at 1.221 5.007 3.942 1.272e-03 0.072 -0.814 TCEAL7 transcription elongation factor A (SII)-like 7 X 102471820 BF591534 Xq22.1 Hs.21861 7

nucleus

regulation of transcription

 
218545_at -0.546 7.762 -3.942 1.272e-03 0.072 -0.815 CCDC91 coiled-coil domain containing 91 12 28301399 NM_018318 12p11.22 Hs.653125 8

Golgi apparatus

protein transport

membrane

 
219436_s_at 0.551 6.908 3.941 1.275e-03 0.072 -0.817 EMCN endomucin 4 -101535522 NM_016242 4q24 Hs.152913 12

extracellular region

plasma membrane

integral to membrane

 
203705_s_at -0.816 7.321 -3.941 1.275e-03 0.072 -0.817 FZD7 frizzled homolog 7 (Drosophila) 2 202607554 AI333651 2q33 Hs.173859 23

non-G-protein coupled 7TM receptor activity

G-protein coupled receptor activity

plasma membrane

G-protein coupled receptor protein signaling pathway

multicellular organismal development

integral to membrane

Wnt receptor signaling pathway

Wnt receptor activity

Wnt signaling pathway

Melanogenesis

Pathways in cancer

Colorectal cancer

Basal cell carcinoma

200768_s_at -0.426 8.543 -3.940 1.277e-03 0.072 -0.819 MAT2A methionine adenosyltransferase II, alpha 2 85619798 BC001686 2p11.2 Hs.516157 18

nucleotide binding

magnesium ion binding

methionine adenosyltransferase activity

protein binding

ATP binding

S-adenosylmethionine biosynthetic process

one-carbon metabolic process

circadian rhythm

response to light stimulus

response to hormone stimulus

transferase activity

potassium ion binding

response to drug

cobalt ion binding

response to cAMP

Cysteine and methionine metabolism

Selenoamino acid metabolism

Biosynthesis of plant hormones

Metabolic pathways

223589_at 0.407 5.059 3.940 1.278e-03 0.072 -0.819 ZNF416 zinc finger protein 416 19 -62774745 BC000130 19q13.4 Hs.247711 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
212870_at -0.840 9.163 -3.939 1.280e-03 0.072 -0.821 SOS2 son of sevenless homolog 2 (Drosophila) 14 -49653595 AI628605 14q21 Hs.291533 20

DNA binding

Rho guanyl-nucleotide exchange factor activity

protein binding

cellular_component

intracellular

regulation of Rho protein signal transduction

regulation of small GTPase mediated signal transduction

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

Dorso-ventral axis formation

Focal adhesion

Gap junction

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Insulin signaling pathway

GnRH signaling pathway

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Endometrial cancer

Glioma

Prostate cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Non-small cell lung cancer

224327_s_at 0.572 6.076 3.939 1.282e-03 0.072 -0.822 DGAT2 diacylglycerol O-acyltransferase homolog 2 (mouse) 11 75157425 AB048286 11q13.5 Hs.334305 16

2-acylglycerol O-acyltransferase activity

diacylglycerol O-acyltransferase activity

membrane fraction

endoplasmic reticulum

glycerol metabolic process

acyltransferase activity

lipid biosynthetic process

membrane

integral to membrane

transferase activity

triglyceride biosynthetic process

Glycerolipid metabolism

Retinol metabolism

Metabolic pathways

217983_s_at 0.501 6.444 3.937 1.286e-03 0.072 -0.825 RNASET2 ribonuclease T2 6 -167262993 NM_003730 6q27 Hs.529989 11

RNA binding

endonuclease activity

ribonuclease activity

extracellular region

RNA catabolic process

hydrolase activity

ribonuclease T2 activity

 
219106_s_at -0.331 12.637 -3.937 1.287e-03 0.072 -0.825 KBTBD10 kelch repeat and BTB (POZ) domain containing 10 2 170074457 NM_006063 2q31.1 Hs.50550 8

ruffle

protein binding

nucleus

cytoplasm

cytoskeleton

plasma membrane

focal adhesion

striated muscle contraction

modification-dependent protein catabolic process

pseudopodium

 
233385_x_at 0.328 6.406 3.937 1.287e-03 0.072 -0.826 RAB4B RAB4B, member RAS oncogene family 19 45976010 AK024845 19q13.2 Hs.631539 5

nucleotide binding

GTPase activity

GTP binding

intracellular

plasma membrane

small GTPase mediated signal transduction

protein transport

vesicle-mediated transport

 
212116_at 0.389 5.761 3.936 1.288e-03 0.072 -0.826 TRIM27 tripartite motif-containing 27 6 -28978757, -330309, -128126 NM_006510 6p22 Hs.440382 27

negative regulation of transcription from RNA polymerase II promoter

DNA binding

transmembrane receptor protein tyrosine kinase activity

protein binding

intracellular

membrane fraction

nucleus

nucleoplasm

cytoplasm

integral to plasma membrane

spermatogenesis

zinc ion binding

cell proliferation

nuclear membrane

regulation of transcription

negative regulation of gene expression, epigenetic

metal ion binding

protein trimerization

 
209838_at -0.873 7.200 -3.935 1.290e-03 0.072 -0.828 COPS2 COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis) 15 -47204762 AA496247 15q21.2 Hs.369614 37

signal transducer activity

protein binding

protein binding

nucleus

nucleolus

cytoplasm

transcription from RNA polymerase II promoter

signal transduction

signalosome

 
204778_x_at 0.435 6.252 3.934 1.293e-03 0.072 -0.830 HOXB7 homeobox B7 17 -44039593 AW102783 17q21.3 Hs.436181 39

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anterior/posterior pattern formation

myeloid cell differentiation

sequence-specific DNA binding

embryonic skeletal system morphogenesis

 
243980_at 0.318 4.330 3.934 1.293e-03 0.072 -0.830 ZNF594 zinc finger protein 594 17 -5023554 AW978739 17p13 Hs.658402 5

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
225717_at -0.941 6.412 -3.934 1.295e-03 0.072 -0.831 KIAA1715 KIAA1715 2 -176498655 AI814587 2q31 Hs.209561 7

protein binding

multicellular organismal development

membrane

integral to membrane

limb development

 
201388_at -0.412 7.184 -3.934 1.295e-03 0.072 -0.831 PSMD3 proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 17 35390585 NM_002809 17q21.1 Hs.12970 34

proteasome complex

protein binding

cytosol

enzyme regulator activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

regulation of protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

205117_at 0.525 6.008 3.933 1.297e-03 0.072 -0.833 FGF1 fibroblast growth factor 1 (acidic) 5 -141951926, -141951926, -141951926, -141951926, -141951926 X59065 5q31 Hs.483635 114

angiogenesis

induction of an organ

protein binding

extracellular region

proteinaceous extracellular matrix

extracellular space

signal transduction

multicellular organismal development

growth factor activity

heparin binding

cell proliferation

fibroblast growth factor receptor signaling pathway

anatomical structure morphogenesis

cell differentiation

lung development

positive regulation of epithelial cell proliferation

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

224630_at -0.356 7.942 -3.933 1.297e-03 0.072 -0.833 ERLEC1 endoplasmic reticulum lectin 1 2 53867571 AK001913 2p16.2 Hs.438336 Hs.713845 10

protein binding

endoplasmic reticulum

endoplasmic reticulum lumen

 
1552430_at 0.296 2.228 3.932 1.299e-03 0.072 -0.834 WDR17 WD repeat domain 17 4 177224125 NM_170710 4q34 Hs.532056 3    
244740_at 1.240 6.242 3.932 1.299e-03 0.072 -0.834 MGC9913 hypothetical protein MGC9913 19   BE855713 19q13.43 Hs.23133 1    
205427_at 0.353 5.729 3.931 1.302e-03 0.072 -0.836 ZNF354A zinc finger protein 354A 5 -178071127 NM_005649 5q35.3 Hs.484324 8

DNA binding

RNA polymerase II transcription factor activity

intracellular

nucleus

regulation of transcription from RNA polymerase II promoter

sensory perception of sound

zinc ion binding

metal ion binding

 
218651_s_at 1.268 6.598 3.931 1.303e-03 0.072 -0.837 LARP6 La ribonucleoprotein domain family, member 6 15 -68930821, -68910942 NM_018357 15q23 Hs.416755 5

RNA binding

nucleus

cytoplasm

RNA processing

ribonucleoprotein complex

 
223652_at 0.855 6.104 3.930 1.304e-03 0.072 -0.838 AS3MT arsenic (+3 oxidation state) methyltransferase 10 104619199 AF226730 10q24.32 Hs.34492 24

soluble fraction

cytoplasm

cytosol

metabolic process

methyltransferase activity

toxin metabolic process

transferase activity

arsonoacetate metabolic process

arsenite methyltransferase activity

methylarsonite methyltransferase activity

response to arsenic

 
234694_at 0.376 5.237 3.925 1.319e-03 0.073 -0.848 CNTROB centrobin, centrosomal BRCA2 interacting protein 17 7776197 AF141344 17p13.1 Hs.348012 8

cytokinesis

centriole

cell cycle

centriole replication

protein domain specific binding

centrosome separation

 
91682_at 0.374 5.283 3.924 1.320e-03 0.073 -0.849 EXOSC4 exosome component 4 8 145205509 AI571298 8q24.3 Hs.632041 16

3'-5'-exoribonuclease activity

exosome (RNase complex)

RNA binding

exonuclease activity

protein binding

nucleus

nucleolus

cytoplasm

rRNA processing

RNA processing

hydrolase activity

RNA degradation

226925_at 0.694 5.058 3.921 1.329e-03 0.073 -0.855 ACPL2 acid phosphatase-like 2 3 142433371 AW069729 3q23 Hs.657887 2

acid phosphatase activity

extracellular region

hydrolase activity

 
212149_at -0.552 9.238 -3.921 1.330e-03 0.073 -0.856 EFR3A EFR3 homolog A (S. cerevisiae) 8 132985540 AW470003 8q24.22 Hs.204564 4

binding

plasma membrane

 
224859_at 0.332 5.886 3.921 1.330e-03 0.073 -0.856 CD276 CD276 molecule 15 71763674 AL360136 15q23-q24 Hs.77873 23

receptor binding

cell proliferation

external side of plasma membrane

membrane

integral to membrane

positive regulation of bone mineralization

positive regulation of T cell proliferation

T cell activation

negative regulation of T cell proliferation

negative regulation of interferon-gamma biosynthetic process

positive regulation of interferon-gamma biosynthetic process

negative regulation of interleukin-2 biosynthetic process

positive regulation of osteoblast differentiation

negative regulation of inflammatory response

regulation of immune response

Cell adhesion molecules (CAMs)

200798_x_at -0.868 6.800 -3.919 1.335e-03 0.073 -0.860 MCL1 myeloid cell leukemia sequence 1 (BCL2-related) 1 -148813658 NM_021960 1q21 Hs.719112 154

cell fate determination

protein binding

nucleus

nucleoplasm

cytoplasm

mitochondrion

mitochondrial outer membrane

anti-apoptosis

multicellular organismal development

protein channel activity

membrane

integral to membrane

cellular homeostasis

cell differentiation

response to cytokine stimulus

regulation of apoptosis

protein heterodimerization activity

 
207040_s_at -0.512 10.356 -3.918 1.336e-03 0.073 -0.860 ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) 22 -39550546 NM_003932 22q13.2 Hs.712713 29

binding

cytoplasm

protein folding

protein binding, bridging

 
235291_s_at 0.461 4.037 3.918 1.337e-03 0.073 -0.861 FLJ32255 hypothetical protein LOC643977 5   BE875232 5p12 Hs.535791 1    
206209_s_at 0.437 6.436 3.916 1.341e-03 0.073 -0.864 CA4 carbonic anhydrase IV 17 55582083 NM_000717 17q23 Hs.89485 30

carbonate dehydratase activity

membrane fraction

plasma membrane

one-carbon metabolic process

visual perception

zinc ion binding

lyase activity

anchored to membrane

metal ion binding

response to stimulus

Nitrogen metabolism

220044_x_at -0.397 8.877 -3.916 1.342e-03 0.073 -0.864 LUC7L3 LUC7-like 3 (S. cerevisiae) 17 46151975 NM_016424 17q21.33 Hs.130293 15

DNA binding

mRNA binding

protein binding

nucleus

mRNA processing

apoptosis

response to stress

RNA splicing

nuclear speck

 
202814_s_at -0.759 7.357 -3.916 1.343e-03 0.073 -0.865 HEXIM1 hexamethylene bis-acetamide inducible 1 17 40580466 AW193511 17q21.31 Hs.586945 Hs.634944 Hs.716487 28

negative regulation of transcription from RNA polymerase II promoter

cyclin-dependent protein kinase inhibitor activity

protein binding

nucleus

cytoplasm

heart development

specific transcriptional repressor activity

snRNA binding

regulation of transcription

negative regulation of cyclin-dependent protein kinase activity

 
230393_at 0.412 5.909 3.915 1.346e-03 0.073 -0.867 CUL5 cullin 5 11 107384617 BF448201 11q22-q23 Hs.440320 Hs.701122 38

G1/S transition of mitotic cell cycle

receptor activity

calcium channel activity

protein binding

cytosol

ubiquitin-dependent protein catabolic process

cell cycle arrest

negative regulation of cell proliferation

induction of apoptosis by intracellular signals

cullin-RING ubiquitin ligase complex

ubiquitin protein ligase binding

interspecies interaction between organisms

Ubiquitin mediated proteolysis

203752_s_at -0.586 8.942 -3.915 1.347e-03 0.073 -0.868 JUND jun D proto-oncogene 19 -18251562 NM_005354 19p13.2 Hs.2780 67

chromatin

osteoblast development

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

sequence-specific DNA binding

positive regulation of osteoblast differentiation

protein dimerization activity

MAPK signaling pathway

1405_i_at 0.580 3.772 3.914 1.349e-03 0.073 -0.869 CCL5 chemokine (C-C motif) ligand 5 17 -31222608 M21121 17q11.2-q12 Hs.514821 312

signal transducer activity

extracellular region

extracellular space

cytoplasm

cellular calcium ion homeostasis

exocytosis

cell motion

chemotaxis

inflammatory response

immune response

cellular defense response

response to oxidative stress

cell adhesion

signal transduction

cell-cell signaling

chemokine activity

response to virus

response to tumor necrosis factor

chemoattractant activity

negative regulation of viral genome replication

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

Toll-like receptor signaling pathway

Prion diseases

Epithelial cell signaling in Helicobacter pylori infection

214106_s_at 0.517 5.044 3.912 1.355e-03 0.073 -0.873 GMDS GDP-mannose 4,6-dehydratase 6 -1569039 AI762113 6p25 Hs.144496 Hs.660919 11

binding

intracellular

cytoplasm

carbohydrate metabolic process

leukocyte adhesion

GDP-mannose 4,6-dehydratase activity

lyase activity

GDP-mannose metabolic process

'de novo' GDP-L-fucose biosynthetic process

cellular metabolic process

coenzyme binding

Fructose and mannose metabolism

Amino sugar and nucleotide sugar metabolism

Metabolic pathways

209070_s_at 0.734 10.150 3.911 1.355e-03 0.073 -0.873 RGS5 regulator of G-protein signaling 5 1 -161378720 AI183997 1q23.1 Hs.24950 26

signal transducer activity

GTPase activator activity

regulation of G-protein coupled receptor protein signaling pathway

negative regulation of signal transduction

 
212061_at -0.554 7.260 -3.911 1.358e-03 0.073 -0.875 SR140 U2-associated SR140 protein 3 144203061 AB002330 3q23 Hs.596572 4

nucleotide binding

RNA binding

RNA processing

 
218013_x_at -0.748 6.579 -3.909 1.361e-03 0.073 -0.877 DCTN4 dynactin 4 (p62) 5 -150068502, -150068502 NM_016221 5q31-q32 Hs.675564 7

nucleus

cytoplasm

centrosome

cytoskeleton

protein N-terminus binding

Huntington's disease

217356_s_at -0.944 10.442 -3.908 1.364e-03 0.073 -0.880 PGK1 phosphoglycerate kinase 1 X 77246321 S81916 Xq13 Hs.78771 52

nucleotide binding

phosphoglycerate kinase activity

ATP binding

cytoplasm

glycolysis

phosphorylation

transferase activity

Glycolysis / Gluconeogenesis

Carbon fixation in photosynthetic organisms

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

222448_s_at -0.611 7.474 -3.908 1.366e-03 0.073 -0.881 CMPK1 cytidine monophosphate (UMP-CMP) kinase 1, cytosolic 1 47572055 AF112216 1p32 Hs.714325 16

nucleotide binding

cytidylate kinase activity

uridine kinase activity

ATP binding

nucleus

cytoplasm

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

pyrimidine ribonucleotide biosynthetic process

transferase activity

phosphotransferase activity, phosphate group as acceptor

Pyrimidine metabolism

Metabolic pathways

218733_at -0.548 6.394 -3.907 1.367e-03 0.073 -0.882 MSL2 male-specific lethal 2 homolog (Drosophila) 3 -137350449, -137350449 NM_018133 3q22.3 Hs.18631 8

protein binding

zinc ion binding

metal ion binding

 
228109_at 0.380 6.056 3.907 1.368e-03 0.073 -0.882 RASGRF2 Ras protein-specific guanine nucleotide-releasing factor 2 5 80292313 AI912976 5q13 Hs.162129 11

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

calcium ion binding

protein binding

intracellular

cytoplasm

endoplasmic reticulum

plasma membrane

regulation of Rho protein signal transduction

regulation of small GTPase mediated signal transduction

MAPK signaling pathway

223046_at -0.565 10.533 -3.905 1.373e-03 0.074 -0.886 EGLN1 egl nine homolog 1 (C. elegans) 1 -229566120 AL117352 1q42.1 Hs.444450 Hs.710300 42

response to hypoxia

embryonic placenta development

iron ion binding

protein binding

cytosol

heart development

zinc ion binding

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

L-ascorbic acid binding

peptidyl-proline dioxygenase activity

oxygen homeostasis

negative regulation of transcription factor activity

metal ion binding

oxidation reduction

Pathways in cancer

Renal cell carcinoma

209412_at -0.508 6.010 -3.905 1.374e-03 0.074 -0.886 TRAPPC10 trafficking protein particle complex 10 21 44256633 U61500 21q22.3 Hs.126221 12

Golgi apparatus

sodium ion transport

sodium ion transmembrane transporter activity

integral to membrane

vesicle-mediated transport

 
225344_at 0.532 6.390 3.904 1.375e-03 0.074 -0.887 NCOA7 nuclear receptor coactivator 7 6 126153693 AL035689 6q22.32 Hs.171426 18

protein binding

intracellular

nucleus

cell wall macromolecule catabolic process

regulation of transcription

 
200998_s_at 0.408 6.621 3.904 1.375e-03 0.074 -0.887 CKAP4 cytoskeleton-associated protein 4 12 -105155789 AW029619 12q23.3 Hs.714862 Hs.74368 22

membrane fraction

endoplasmic reticulum

membrane

integral to membrane

 
241866_at 0.856 4.232 3.904 1.376e-03 0.074 -0.888 SLC16A7 solute carrier family 16, member 7 (monocarboxylic acid transporter 2) 12 58369392 AW975728 12q13 Hs.439643 8

pyruvate secondary active transmembrane transporter activity

membrane fraction

plasma membrane

integral to plasma membrane

transport

pyruvate transport

symporter activity

secondary active monocarboxylate transmembrane transporter activity

organic anion transport

 
218507_at 0.418 5.653 3.900 1.387e-03 0.074 -0.895 C7orf68 chromosome 7 open reading frame 68 7 127883119 NM_013332 7q32.1 Hs.710088 9

molecular_function

cellular_component

response to stress

membrane

integral to membrane

 
209487_at 0.449 6.152 3.900 1.388e-03 0.074 -0.896 RBPMS RNA binding protein with multiple splicing 8 30361485, 30361485 D84109 8p12-p11 Hs.334587 8

nucleotide binding

RNA binding

protein binding

RNA processing

 
207057_at 1.398 6.095 3.898 1.392e-03 0.074 -0.898 SLC16A7 solute carrier family 16, member 7 (monocarboxylic acid transporter 2) 12 58369392 NM_004731 12q13 Hs.439643 8

pyruvate secondary active transmembrane transporter activity

membrane fraction

plasma membrane

integral to plasma membrane

transport

pyruvate transport

symporter activity

secondary active monocarboxylate transmembrane transporter activity

organic anion transport

 
206254_at -1.093 7.646 -3.898 1.392e-03 0.074 -0.899 EGF epidermal growth factor (beta-urogastrone) 4 111053488 NM_001963 4q25 Hs.419815 289

activation of MAPKK activity

angiogenesis

epidermal growth factor receptor binding

calcium ion binding

protein binding

extracellular region

extracellular space

plasma membrane

DNA replication

signal transduction

epidermal growth factor receptor signaling pathway

growth factor activity

integral to membrane

positive regulation of granule cell precursor proliferation

transmembrane receptor protein tyrosine kinase activator activity

platelet alpha granule lumen

positive regulation of phosphorylation

positive regulation of MAP kinase activity

positive regulation of epidermal growth factor receptor activity

positive regulation of mitosis

branching morphogenesis of a tube

regulation of protein secretion

regulation of peptidyl-tyrosine phosphorylation

negative regulation of secretion

MAPK signaling pathway

ErbB signaling pathway

Cytokine-cytokine receptor interaction

Endocytosis

Focal adhesion

Gap junction

Regulation of actin cytoskeleton

Pathways in cancer

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Bladder cancer

Non-small cell lung cancer

202747_s_at 0.543 8.325 3.898 1.394e-03 0.074 -0.900 ITM2A integral membrane protein 2A X -78502536 NM_004867 Xq13.3-Xq21.2 Hs.17109 Hs.694944 14

cytoplasm

plasma membrane

integral to membrane

 
238996_x_at -0.906 11.637 -3.898 1.394e-03 0.074 -0.900 ALDOA aldolase A, fructose-bisphosphate 16 29971991, 29983100, 29983473, 29984544 AI921586 16p11.2 Hs.513490 55

actin binding

fructose-bisphosphate aldolase activity

glycolysis

ATP biosynthetic process

striated muscle contraction

actin filament organization

metabolic process

regulation of cell shape

actin cytoskeleton

tubulin binding

lyase activity

fructose 1,6-bisphosphate metabolic process

I band

identical protein binding

muscle maintenance

fructose binding

extracellular vesicular exosome

Glycolysis / Gluconeogenesis

Pentose phosphate pathway

Fructose and mannose metabolism

Carbon fixation in photosynthetic organisms

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

202222_s_at -0.407 11.468 -3.898 1.395e-03 0.074 -0.900 DES desmin 2 219991342 NM_001927 2q35 Hs.594952 57

structural constituent of cytoskeleton

protein binding

intracellular

insoluble fraction

cytoplasm

cytoskeleton

muscle contraction

cytoskeleton organization

regulation of heart contraction

Z disc

sarcolemma

contractile fiber

type III intermediate filament

synapse

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

209154_at 0.901 8.433 3.897 1.395e-03 0.074 -0.900 TAX1BP3 Tax1 (human T-cell leukemia virus type I) binding protein 3 17 -3512937 AF234997 17p13 Hs.12956 14

nucleus

cytoplasm

Rho protein signal transduction

beta-catenin binding

negative regulation of cell proliferation

negative regulation of Wnt receptor signaling pathway

transcription regulator activity

 
228410_at 0.427 5.115 3.896 1.399e-03 0.074 -0.903 GAB3 GRB2-associated binding protein 3 X -153556720 AA495984 Xq28 Hs.496982 4    
219126_at -0.679 7.551 -3.896 1.399e-03 0.074 -0.903 PHF10 PHD finger protein 10 6 -169845925 NM_018288 6q27 Hs.435933 14

protein binding

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
220939_s_at -0.532 9.023 -3.895 1.401e-03 0.074 -0.905 DPP8 dipeptidyl-peptidase 8 15 -63525050, -63525050 NM_017743 15q22 Hs.591106 16

aminopeptidase activity

nucleus

cytoplasm

proteolysis

immune response

peptidase activity

serine-type peptidase activity

dipeptidyl-peptidase activity

membrane

 
211678_s_at -0.561 8.537 -3.892 1.410e-03 0.074 -0.911 RNF114 ring finger protein 114 20 47986320 AF090934 20q13.13 Hs.144949 9

protein binding

intracellular

multicellular organismal development

spermatogenesis

zinc ion binding

cell differentiation

metal ion binding

 
218323_at -0.481 8.036 -3.889 1.419e-03 0.075 -0.916 RHOT1 ras homolog gene family, member T1 17 27493585, 27493585 NM_018307 17q11.2 Hs.655325 14

nucleotide binding

molecular_function

calcium ion binding

protein binding

GTP binding

intracellular

mitochondrion

mitochondrial outer membrane

apoptosis

small GTPase mediated signal transduction

membrane

integral to membrane

hydrolase activity

cellular homeostasis

integral to mitochondrial outer membrane

mitochondrion transport along microtubule

 
213477_x_at 1.059 11.975 3.888 1.422e-03 0.075 -0.918 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 6 -74282193 AL515273 6q14.1 Hs.520703 Hs.586423 Hs.644639 Hs.697944 Hs.708256 Hs.713109 86

nucleotide binding

translation elongation factor activity

GTPase activity

protein binding

GTP binding

cytoplasm

cytosol

eukaryotic translation elongation factor 1 complex

translational elongation

translational elongation

 
226124_at 0.470 5.319 3.888 1.423e-03 0.075 -0.919 ZFP90 zinc finger protein 90 homolog (mouse) 16 67131161 AA747309 16q22.1 Hs.461074 Hs.709017 7

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
226474_at 0.529 5.782 3.887 1.425e-03 0.075 -0.920 NLRC5 NLR family, CARD domain containing 5 16 55580910 AA005023 16q13 Hs.528836 3

nucleotide binding

protein binding

ATP binding

cytoplasm

 
217816_s_at -0.428 9.041 -3.886 1.427e-03 0.075 -0.922 PCNP PEST proteolytic signal containing nuclear protein 3 102775731 NM_020357 3q12.3 Hs.545311 Hs.654949 6

protein binding

nucleus

cell cycle

protein ubiquitination

proteasomal ubiquitin-dependent protein catabolic process

 
230249_at -1.180 5.937 -3.886 1.429e-03 0.075 -0.923 KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3 8 136538897 AI650382 8q24.2 Hs.444558 20

RNA binding

protein binding

nucleus

nucleolus

cytoplasm

spermatogenesis

SH3 domain binding

regulation of transcription

 
225999_at -0.603 5.149 -3.886 1.429e-03 0.075 -0.923 RIMKLB ribosomal modification protein rimK-like family member B 12 8741784 AI743612 12p13.31 Hs.504670 4

nucleotide binding

catalytic activity

ATP binding

protein modification process

manganese ion binding

metal ion binding

 
206116_s_at -0.880 13.052 -3.884 1.432e-03 0.075 -0.925 TPM1 tropomyosin 1 (alpha) 15 61121890, 61121890, 61127688 NM_000366 15q22.1 Hs.133892 76

stress fiber

positive regulation of heart rate by epinephrine

actin binding

structural constituent of cytoskeleton

cytoplasm

cytoskeleton

muscle thin filament tropomyosin

cell motion

regulation of muscle contraction

cytoskeleton organization

regulation of heart contraction

structural constituent of muscle

sarcomere

muscle filament sliding

negative regulation of cell migration

ruffle organization

bleb

ruffle membrane

positive regulation of ATPase activity

cellular response to reactive oxygen species

wound healing

sarcomere organization

positive regulation of cell adhesion

positive regulation of stress fiber formation

ventricular cardiac muscle morphogenesis

cardiac muscle contraction

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

211799_x_at 0.499 8.293 3.882 1.439e-03 0.075 -0.929 HLA-C major histocompatibility complex, class I, C 6 -31344507, -2686290, -2483726 U62824 6p21.3 Hs.654404 Hs.656020 Hs.77961 521

antigen processing and presentation of peptide antigen via MHC class I

extracellular region

plasma membrane

integral to plasma membrane

immune response

immune response

membrane

integral to membrane

antigen processing and presentation

MHC class I receptor activity

MHC class I protein complex

interspecies interaction between organisms

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

200895_s_at -0.552 8.114 -3.880 1.446e-03 0.075 -0.934 FKBP4 FK506 binding protein 4, 59kDa 12 2774368 NM_002014 12p13.33 Hs.524183 Hs.713721 47

peptidyl-prolyl cis-trans isomerase activity

ATP binding

GTP binding

FK506 binding

intracellular

nucleus

nucleolus

cytoplasm

protein folding

steroid hormone receptor complex assembly

copper ion transport

embryo implantation

isomerase activity

protein binding, bridging

heat shock protein binding

protein complex localization

glucocorticoid receptor binding

male sex differentiation

phosphoprotein binding

 
1553172_at -0.566 5.849 -3.879 1.447e-03 0.075 -0.935 ZNF777 zinc finger protein 777 7 -148759386 NM_015694 7q36.1 Hs.38512 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
225324_at -0.716 7.581 -3.876 1.458e-03 0.076 -0.942 CRLS1 cardiolipin synthase 1 20 5934738, 5935897 AL035461 20p13-p12.3 Hs.224764 14

mitochondrion

mitochondrial inner membrane

phospholipid biosynthetic process

membrane

integral to membrane

transferase activity

phosphotransferase activity, for other substituted phosphate groups

Glycerophospholipid metabolism

Metabolic pathways

212845_at -0.523 10.495 -3.875 1.459e-03 0.076 -0.942 SAMD4A sterile alpha motif domain containing 4A 14 54104386, 54291255 AB028976 14q22.2 Hs.98259 4

cytoplasm

synaptosome

translation repressor activity

dendrite

positive regulation of translation

 
1554628_at 0.626 3.887 3.875 1.461e-03 0.076 -0.943 ZNF57 zinc finger protein 57 19 2851895 BC028974 19p13.3 Hs.591378 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
212203_x_at 0.603 9.583 3.874 1.463e-03 0.076 -0.944 IFITM3 interferon induced transmembrane protein 3 (1-8U) 11 -309672 BF338947 11p15.5 Hs.374650 13

plasma membrane

immune response

response to biotic stimulus

integral to membrane

 
225339_at -0.542 8.195 -3.874 1.464e-03 0.076 -0.945 SPAG9 sperm associated antigen 9 17 -46394534 BG290577 17q21.33 Hs.463439 22

acrosomal vesicle

protein binding

cytoplasm

spermatogenesis

integral to membrane

positive regulation of cell migration

perinuclear region of cytoplasm

 
209982_s_at 0.353 4.303 3.874 1.464e-03 0.076 -0.945 NRXN2 neurexin 2 11 -64130221, -64130221 AA608820 11q13 Hs.372938 16

calcium ion binding

protein binding

cell adhesion

membrane

integral to membrane

Cell adhesion molecules (CAMs)

207436_x_at -0.421 7.983 -3.872 1.469e-03 0.076 -0.948 KIAA0894 KIAA0894 protein 10   NM_014896 10q23.33   1    
223041_at -0.514 7.409 -3.871 1.471e-03 0.076 -0.950 CD99L2 CD99 molecule-like 2 X -149685466 AL136580 Xq28 Hs.522805 8

protein binding

plasma membrane

cell adhesion

integral to membrane

cell junction

 
224710_at 0.507 5.939 3.870 1.477e-03 0.076 -0.953 RAB34 RAB34, member RAS oncogene family 17 -24065425, -24065425, -24065425 AF322067 17q11.2 Hs.301853 16

nucleotide binding

ruffle

GTPase activity

GTP binding

cytoplasm

early endosome

Golgi apparatus

endocytosis

small GTPase mediated signal transduction

protein transport

guanyl nucleotide binding

 
226831_at -0.586 8.781 -3.869 1.478e-03 0.076 -0.954 SLC25A46 solute carrier family 25, member 46 5 110102652 AA928542 5q22.1 Hs.75639 5

binding

cellular_component

mitochondrion

mitochondrial inner membrane

transport

biological_process

membrane

integral to membrane

 
205584_at -0.368 6.114 -3.867 1.485e-03 0.076 -0.958 ALG13 asparagine-linked glycosylation 13 homolog (S. cerevisiae) X 110811068 NM_024810 Xq23 Hs.443061 14

N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity

endoplasmic reticulum

carbohydrate metabolic process

transferase activity, transferring hexosyl groups

carbohydrate binding

lipid glycosylation

N-Glycan biosynthesis

Metabolic pathways

232684_at 0.758 4.991 3.866 1.488e-03 0.076 -0.961 LOC253264 hypothetical protein LOC253264 10   AK023445 10q22.2 Hs.662111 1    
225398_at -0.664 9.382 -3.866 1.489e-03 0.076 -0.961 RPUSD4 RNA pseudouridylate synthase domain containing 4 11 -125577199 AL580514 11q24.2 Hs.150458 5

pseudouridine synthesis

RNA binding

pseudouridine synthase activity

 
236937_at -0.595 5.404 -3.865 1.491e-03 0.076 -0.962 VPS8 vacuolar protein sorting 8 homolog (S. cerevisiae) 3 186012624 BF108423 3q27.2 Hs.269263 6

protein binding

zinc ion binding

metal ion binding

 
204655_at 0.557 4.472 3.865 1.492e-03 0.076 -0.963 CCL5 chemokine (C-C motif) ligand 5 17 -31222608 NM_002985 17q11.2-q12 Hs.514821 312

signal transducer activity

extracellular region

extracellular space

cytoplasm

cellular calcium ion homeostasis

exocytosis

cell motion

chemotaxis

inflammatory response

immune response

cellular defense response

response to oxidative stress

cell adhesion

signal transduction

cell-cell signaling

chemokine activity

response to virus

response to tumor necrosis factor

chemoattractant activity

negative regulation of viral genome replication

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

Toll-like receptor signaling pathway

Prion diseases

Epithelial cell signaling in Helicobacter pylori infection

208264_s_at -0.837 8.048 -3.861 1.503e-03 0.077 -0.970 EIF3J eukaryotic translation initiation factor 3, subunit J 15 42616557 NM_003758 15q21.1 Hs.404056 19

translation initiation factor activity

protein binding

cytoplasm

cytosol

eukaryotic translation initiation factor 3 complex

translational initiation

 
226879_at 0.318 6.393 3.858 1.514e-03 0.077 -0.976 HVCN1 hydrogen voltage-gated channel 1 12 -109570873, -109570873 AW406569 12q24.11 Hs.211511 Hs.334637 11

voltage-gated ion channel activity

ion transport

response to pH

response to zinc ion

response to zinc ion

proton transport

membrane

integral to membrane

voltage-gated proton channel activity

voltage-gated proton channel activity

 
229762_at 0.507 5.304 3.857 1.515e-03 0.077 -0.977 C7orf38 chromosome 7 open reading frame 38 7 -98981858 AI740938 7q22.1 Hs.596587 6

membrane

integral to membrane

 
235128_at -0.680 10.270 -3.856 1.520e-03 0.077 -0.980 SYNPO synaptopodin 5 150000412, 150000412 AI569782 5q33.1 Hs.435228 Hs.591256 Hs.714870 20

actin binding

cytoplasm

plasma membrane

tight junction

postsynaptic density

actin cytoskeleton

cell junction

cell projection

dendritic spine

perikaryon

synapse

postsynaptic membrane

 
228027_at 0.490 7.503 3.855 1.521e-03 0.077 -0.981 GPRASP2 G protein-coupled receptor associated sorting protein 2 X 101853995 BF732712 Xq22.1 Hs.603154 11

protein binding

cytoplasm

 
212886_at -0.472 9.167 -3.854 1.525e-03 0.077 -0.983 CCDC69 coiled-coil domain containing 69 5 -150540805 AL080169 5q33.1 Hs.655336 3    
218598_at -0.499 6.015 -3.853 1.527e-03 0.078 -0.985 RINT1 RAD50 interactor 1 7 104959767 NM_021930 7q22.3 Hs.531388 12

protein binding

cytoplasm

endoplasmic reticulum

cell cycle

protein transport

membrane

vesicle-mediated transport

G2/M transition DNA damage checkpoint

 
243481_at 0.350 4.148 3.852 1.531e-03 0.078 -0.987 RHOJ ras homolog gene family, member J 14 62740897 AA181207 14q23.2 Hs.656339 8

nucleotide binding

GTPase activity

protein binding

GTP binding

cellular_component

intracellular

plasma membrane

small GTPase mediated signal transduction

Rho protein signal transduction

regulation of cell shape

actin cytoskeleton organization

 
205726_at -0.787 6.840 -3.852 1.533e-03 0.078 -0.988 DIAPH2 diaphanous homolog 2 (Drosophila) X 95826317, 95826317 NM_006729 Xq21.33 Hs.226483 Hs.716101 14

cytokinesis

actin binding

receptor binding

cytoplasm

early endosome

Golgi apparatus

cytosol

multicellular organismal development

cellular component organization

Rho GTPase binding

actin cytoskeleton organization

cell differentiation

oogenesis

Regulation of actin cytoskeleton

205836_s_at -0.715 5.254 -3.851 1.535e-03 0.078 -0.989 YTHDC2 YTH domain containing 2 5 112877308 NM_022828 5q22.2 Hs.231942 6

nucleotide binding

nucleic acid binding

helicase activity

ATP binding

hydrolase activity

 
208709_s_at -0.415 9.962 -3.850 1.538e-03 0.078 -0.991 NRD1 nardilysin (N-arginine dibasic convertase) 1 -52027453 U64898 1p32.2-p32.1 Hs.584782 18

metalloendopeptidase activity

protein binding

cytosol

proteolysis

neuromuscular junction development

peptidase activity

zinc ion binding

cell proliferation

cell surface

cell migration

metal ion binding

epidermal growth factor binding

positive regulation of membrane protein ectodomain proteolysis

regulation of endopeptidase activity

 
1558080_s_at 0.430 3.350 3.846 1.552e-03 0.078 -0.999 DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 13 95127402 BG913589 13q32.1 Hs.59214 19

protein kinase inhibitor activity

binding

cytoplasm

endoplasmic reticulum

response to unfolded protein

response to virus

heat shock protein binding

 
235503_at -0.666 10.949 -3.844 1.557e-03 0.078 -1.003 ASB5 ankyrin repeat and SOCS box-containing 5 4 -177371821 BF589787 4q34.2 Hs.591712 4

intracellular signaling cascade

modification-dependent protein catabolic process

 
1569949_at 0.915 8.496 3.844 1.558e-03 0.078 -1.003 GRK5 G protein-coupled receptor kinase 5 10 120957186 BC018116 10q24-qter Hs.524625 38

nucleotide binding

G-protein coupled receptor kinase activity

signal transducer activity

protein kinase C binding

protein binding

ATP binding

phospholipid binding

soluble fraction

cytoplasm

plasma membrane

protein amino acid phosphorylation

signal transduction

G-protein signaling, coupled to cAMP nucleotide second messenger

tachykinin receptor signaling pathway

regulation of G-protein coupled receptor protein signaling pathway

transferase activity

Chemokine signaling pathway

Endocytosis

242002_at 0.524 4.931 3.843 1.558e-03 0.078 -1.003 NKAIN2 Na+/K+ transporting ATPase interacting 2 6 124166767 N62814 6q21 Hs.656604 6

plasma membrane

integral to membrane

 
226394_at -0.475 7.152 -3.842 1.562e-03 0.078 -1.005 MARCH5 membrane-associated ring finger (C3HC4) 5 10 94040899 BE966193 10q23.32-q23.33 Hs.573490 8

mitochondrion

mitochondrial outer membrane

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
239004_at 0.263 5.936 3.842 1.564e-03 0.078 -1.007 SQSTM1 sequestosome 1 5 179165993, 179166608, 179180447 AI041019 5q35 Hs.437277 100

protein kinase C binding

protein binding

nucleus

cytoplasm

late endosome

cytosol

cytosol

ubiquitin-dependent protein catabolic process

apoptosis

response to stress

immune response

intracellular signaling cascade

protein localization

zinc ion binding

endosome transport

cell differentiation

receptor tyrosine kinase binding

SH2 domain binding

SH2 domain binding

regulation of I-kappaB kinase/NF-kappaB cascade

regulation of I-kappaB kinase/NF-kappaB cascade

ubiquitin binding

ubiquitin binding

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

 
212694_s_at 0.553 8.281 3.841 1.566e-03 0.078 -1.008 PCCB propionyl Coenzyme A carboxylase, beta polypeptide 3 137451856 NM_000532 3q21-q22 Hs.63788 26

nucleotide binding

propionyl-CoA carboxylase activity

ATP binding

mitochondrion

mitochondrial matrix

ligase activity

Valine, leucine and isoleucine degradation

Propanoate metabolism

Metabolic pathways

215718_s_at -0.384 3.970 -3.841 1.567e-03 0.078 -1.009 PHF3 PHD finger protein 3 6 64414389 AI949220 6q12 Hs.348921 13

molecular_function

protein binding

cellular_component

nucleus

transcription

multicellular organismal development

zinc ion binding

metal ion binding

 
212103_at -0.475 7.476 -3.841 1.567e-03 0.078 -1.009 KPNA6 karyopherin alpha 6 (importin alpha 7) 1 32346230 BG403834 1p35.1-p34.3 Hs.470588 Hs.711019 53

protein binding

nucleus

nuclear pore

cytoplasm

NLS-bearing substrate import into nucleus

intracellular protein transport

protein transporter activity

 
225578_at -0.742 7.671 -3.839 1.571e-03 0.078 -1.011 C13orf37 chromosome 13 open reading frame 37 13 -72180495 AI885466 13q21.33-q22.1 Hs.28465 1    
230218_at 0.601 5.009 3.839 1.573e-03 0.078 -1.012 HIC1 hypermethylated in cancer 1 17 1905142, 1906353 BF476403 17p13.3 Hs.695682 Hs.72956 25

transcription factor activity

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

metal ion binding

 
219825_at 0.860 4.693 3.839 1.574e-03 0.078 -1.013 CYP26B1 cytochrome P450, family 26, subfamily B, polypeptide 1 2 -72209874 NM_019885 2p13.2 Hs.91546 11

cell fate determination

retinoic acid binding

endoplasmic reticulum

microsome

male meiosis

spermatogenesis

retinoic acid 4-hydroxylase activity

electron carrier activity

proximal/distal pattern formation

membrane

heme binding

embryonic limb morphogenesis

retinoic acid catabolic process

metal ion binding

negative regulation of retinoic acid receptor signaling pathway

oxidation reduction

Retinol metabolism

230995_at -0.618 5.806 -3.838 1.576e-03 0.078 -1.014 CMBL carboxymethylenebutenolidase homolog (Pseudomonas) 5 -10330706 AW294145 5p15.2 Hs.192586 4

protein binding

hydrolase activity

gamma-Hexachlorocyclohexane degradation

Fluorobenzoate degradation

1,4-Dichlorobenzene degradation

Metabolic pathways

219341_at 0.435 5.041 3.838 1.578e-03 0.078 -1.015 CLN8 ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation) 8 1699276 NM_018941 8p23 Hs.127675 15

age-dependent response to oxidative stress

endoplasmic reticulum

ER-Golgi intermediate compartment

phospholipid metabolic process

lipid transport

mitochondrial membrane organization

lysosome organization

nervous system development

adult walking behavior

cholesterol metabolic process

associative learning

regulation of cell size

lipid biosynthetic process

membrane

integral to membrane

spinal cord motor neuron differentiation

social behavior

negative regulation of apoptosis

cellular protein catabolic process

cellular macromolecule catabolic process

photoreceptor cell maintenance

negative regulation of proteolysis

ceramide biosynthetic process

musculoskeletal movement

neuromuscular process controlling posture

neuromuscular process controlling balance

negative regulation of transferase activity

glutamate uptake during transmission of nerve impulse

retina development in camera-type eye

neurofilament cytoskeleton organization

 
221502_at -0.724 10.595 -3.837 1.580e-03 0.078 -1.016 KPNA3 karyopherin alpha 3 (importin alpha 4) 13 -49171444 AL120704 13q14.3 Hs.527919 61

protein binding

nucleus

nuclear pore

cytoplasm

protein complex assembly

NLS-bearing substrate import into nucleus

intracellular protein transport

nuclear localization sequence binding

protein transporter activity

 
214177_s_at -0.759 8.347 -3.835 1.585e-03 0.079 -1.019 PBXIP1 pre-B-cell leukemia homeobox interacting protein 1 1 -153183179 AI935162 1q21.3 Hs.505806 8

transcription corepressor activity

protein binding

nucleus

cytoplasm

cytosol

cytoskeleton

microtubule

multicellular organismal development

negative regulation of transcription

cell differentiation

 
213462_at 0.499 5.750 3.834 1.588e-03 0.079 -1.021 NPAS2 neuronal PAS domain protein 2 2 100803044 AW000928 2q11.2 Hs.156832 Hs.705895 23

transcription factor activity

signal transducer activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

signal transduction

central nervous system development

circadian sleep/wake cycle

locomotor rhythm

positive regulation of transcription from RNA polymerase II promoter

rhythmic process

Hsp90 protein binding

Circadian rhythm - mammal

212601_at -0.404 7.404 -3.833 1.592e-03 0.079 -1.024 ZZEF1 zinc finger, ZZ-type with EF-hand domain 1 17 -3854487 AB007859 17p13.2 Hs.277624 4

protein binding

anaphase-promoting complex

zinc ion binding

regulation of mitotic metaphase/anaphase transition

metal ion binding

 
200721_s_at -0.387 7.848 -3.831 1.600e-03 0.079 -1.028 ACTR1A ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) 10 -104228976 NM_005736 10q24.32 Hs.153961 26

nucleotide binding

protein binding

ATP binding

cytoplasm

centrosome

cytoskeleton

dynactin complex

vesicle-mediated transport

 
215046_at -0.768 4.470 -3.828 1.609e-03 0.079 -1.033 C2orf67 chromosome 2 open reading frame 67 2 -210593679 AL133053 2q34 Hs.282260 Hs.591638 4    
1554717_a_at -0.589 4.173 -3.828 1.610e-03 0.079 -1.034 PDE4D phosphodiesterase 4D, cAMP-specific (phosphodiesterase E3 dunce homolog, Drosophila) 5 -58300622, -58300622 BC008390 5q12 Hs.117545 89

3',5'-cyclic-AMP phosphodiesterase activity

soluble fraction

insoluble fraction

cytoplasm

centrosome

cytoskeleton

signal transduction

membrane

hydrolase activity

metal ion binding

Purine metabolism

205040_at 0.576 4.148 3.826 1.616e-03 0.079 -1.037 ORM1 orosomucoid 1 9 116125123 NM_000607 9q31-q32 Hs.522356 55

regulation of immune system process

protein binding

extracellular region

extracellular space

acute-phase response

inflammatory response

 
235953_at 0.660 4.455 3.825 1.618e-03 0.079 -1.038 ZNF610 zinc finger protein 610 19 57531309, 57540493 AA776810 19q13.41 Hs.357663 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
218168_s_at -0.524 11.345 -3.823 1.624e-03 0.080 -1.042 CABC1 chaperone, ABC1 activity of bc1 complex homolog (S. pombe) 1 225194560 NM_020247 1q42.13 Hs.118241 10

nucleotide binding

ATP binding

mitochondrion

cell death

kinase activity

transferase activity

 
217362_x_at 0.457 6.863 3.823 1.624e-03 0.080 -1.042 HLA-DRB6 major histocompatibility complex, class II, DR beta 6 (pseudogene) 6 -32628467, -3714099 AF005487 6p21.3 Hs.696211 7    
226490_at 0.490 3.681 3.819 1.639e-03 0.080 -1.050 NHSL1 NHS-like 1 6 -138784873, -138784873 AA503387 6q23.3 Hs.652741 3    
228905_at -0.627 7.869 -3.819 1.639e-03 0.080 -1.050 PCM1 pericentriolar material 1 8 17824645 BE672700 8p22-p21.3 Hs.491148 36

pericentriolar material

protein binding

cytoplasm

cytoskeleton

nonmotile primary cilium

centriolar satellite

cilium assembly

cilium assembly

centrosome organization

 
201687_s_at -0.495 7.295 -3.819 1.639e-03 0.080 -1.050 API5 apoptosis inhibitor 5 11 43290080 NM_006595 11p11.2 Hs.435771 15

binding

nucleus

spliceosomal complex

cytoplasm

apoptosis

anti-apoptosis

anti-apoptosis

anti-apoptosis

fibroblast growth factor binding

 
238994_at -0.494 5.652 -3.817 1.644e-03 0.080 -1.053 OTUD7B OTU domain containing 7B 1 -148178855 AW022496 1q21.2 Hs.98322 11

DNA binding

ubiquitin thiolesterase activity

protein binding

nucleus

cytoplasm

peptidase activity

cysteine-type peptidase activity

zinc ion binding

protein deubiquitination

modification-dependent protein catabolic process

negative regulation of I-kappaB kinase/NF-kappaB cascade

metal ion binding

 
235944_at 1.069 5.508 3.817 1.647e-03 0.080 -1.055 HMCN1 hemicentin 1 1 183970305 BF446673 1q25.3-q31.1 Hs.58877 14

calcium ion binding

extracellular region

basement membrane

visual perception

bioluminescence

protein-chromophore linkage

response to stimulus

 
235032_at -0.554 8.020 -3.816 1.649e-03 0.080 -1.056 DNAJC21 DnaJ (Hsp40) homolog, subfamily C, member 21 5 34965454 BG112118 5p13.2 Hs.131887 5

nucleic acid binding

intracellular

zinc ion binding

heat shock protein binding

metal ion binding

 
212184_s_at -0.691 7.951 -3.814 1.655e-03 0.080 -1.059 MAP3K7IP2 mitogen-activated protein kinase kinase kinase 7 interacting protein 2 6 149680755 AL117407 6q25.1-q25.3 Hs.269775 39

protein binding

intracellular

cytoplasm

cytosol

cytosol

zinc ion binding

membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of I-kappaB kinase/NF-kappaB cascade

metal ion binding

MAPK signaling pathway

Toll-like receptor signaling pathway

202112_at 0.596 9.404 3.814 1.656e-03 0.080 -1.060 VWF von Willebrand factor 12 -5928300 NM_000552 12p13.3 Hs.440848 371

liver development

placenta development

glycoprotein binding

protease binding

integrin binding

collagen binding

extracellular region

extracellular region

extracellular region

proteinaceous extracellular matrix

endoplasmic reticulum

plasma membrane

response to wounding

external side of plasma membrane

immunoglobulin binding

platelet activation

platelet activation

platelet alpha granule

cell-substrate adhesion

Weibel-Palade body

protein homodimerization activity

protein N-terminus binding

chaperone binding

protein homooligomerization

Focal adhesion

ECM-receptor interaction

Complement and coagulation cascades

229958_at 0.633 6.777 3.814 1.657e-03 0.080 -1.060 CLN8 ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation) 8 1699276 W93695 8p23 Hs.127675 15

age-dependent response to oxidative stress

endoplasmic reticulum

ER-Golgi intermediate compartment

phospholipid metabolic process

lipid transport

mitochondrial membrane organization

lysosome organization

nervous system development

adult walking behavior

cholesterol metabolic process

associative learning

regulation of cell size

lipid biosynthetic process

membrane

integral to membrane

spinal cord motor neuron differentiation

social behavior

negative regulation of apoptosis

cellular protein catabolic process

cellular macromolecule catabolic process

photoreceptor cell maintenance

negative regulation of proteolysis

ceramide biosynthetic process

musculoskeletal movement

neuromuscular process controlling posture

neuromuscular process controlling balance

negative regulation of transferase activity

glutamate uptake during transmission of nerve impulse

retina development in camera-type eye

neurofilament cytoskeleton organization

 
209281_s_at -0.582 6.140 -3.811 1.667e-03 0.080 -1.066 ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 12 -88505956 M95541 12q21.3 Hs.506276 38

nucleotide binding

magnesium ion binding

calcium-transporting ATPase activity

calcium ion binding

calmodulin binding

ATP binding

plasma membrane

integral to plasma membrane

ATP biosynthetic process

cation transport

calcium ion transport

metabolic process

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

Calcium signaling pathway

227025_at -0.369 6.105 -3.811 1.668e-03 0.080 -1.066 PPHLN1 periphilin 1 12 41006213, 41006213, 41006213, 41006213 BG284497 12q12 Hs.444157 13

nucleus

cytoplasm

keratinization

 
220709_at 0.843 5.270 3.811 1.668e-03 0.080 -1.066 ZNF556 zinc finger protein 556 19 2818332 NM_024967 19p13.3 Hs.287433 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
243618_s_at 0.449 8.093 3.810 1.669e-03 0.080 -1.067 ZNF827 zinc finger protein 827 4 -146901337 BF678830 4q31.21-q31.22 Hs.133916 Hs.633543 7

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
204806_x_at 0.498 8.027 3.809 1.673e-03 0.080 -1.069 HLA-F major histocompatibility complex, class I, F 6 29799095, 29799095, 1143812, 1143812, 945922, 945922 NM_018950 6p21.3 Hs.519972 68

antigen processing and presentation of peptide antigen via MHC class I

immune response

membrane

integral to membrane

antigen processing and presentation

MHC class I receptor activity

MHC class I protein complex

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

212169_at 0.508 8.166 3.809 1.674e-03 0.080 -1.070 FKBP9 FK506 binding protein 9, 63 kDa 7 32963529 AL050187 7p11.1 Hs.103934 7

peptidyl-prolyl cis-trans isomerase activity

calcium ion binding

endoplasmic reticulum

protein folding

isomerase activity

 
213056_at 0.495 3.725 3.809 1.674e-03 0.080 -1.070 FRMD4B FERM domain containing 4B 3 -69301835 AU145019 3p14.1 Hs.709671 5

binding

cytoplasm

cytoskeleton

 
221950_at 0.538 3.887 3.808 1.675e-03 0.080 -1.070 EMX2 empty spiracles homeobox 2 10 119291945 AI478455 10q26.1 Hs.202095 17

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anterior/posterior pattern formation

dentate gyrus development

cell proliferation in forebrain

forebrain cell migration

neuron differentiation

response to drug

sequence-specific DNA binding

 
226398_s_at 0.383 7.559 3.808 1.676e-03 0.080 -1.071 C10orf4 chromosome 10 open reading frame 4 10 -95418318 AI804930 10q23.33 Hs.658192 7

protein binding

nucleus

 
209748_at -0.515 6.626 -3.808 1.677e-03 0.080 -1.072 SPAST spastin 2 32142183 AB029006 2p24-p21 Hs.468091 90

nucleotide binding

microtubule bundle formation

ATP binding

ATP binding

nucleus

nucleus

cytoplasm

endosome

endoplasmic reticulum

centrosome

spindle

microtubule

ER to Golgi vesicle-mediated transport

cell cycle

cytokinesis, completion of separation

multicellular organismal development

nervous system development

microtubule binding

microtubule binding

cell death

microtubule-severing ATPase activity

membrane

integral to membrane

hydrolase activity

nucleoside-triphosphatase activity

cell differentiation

midbody

protein hexamerization

ATPase activity, uncoupled

alpha-tubulin binding

perinuclear region of cytoplasm

beta-tubulin binding

microtubule severing

protein homooligomerization

cell division

 
234980_at -1.116 6.810 -3.808 1.678e-03 0.080 -1.072 TMEM56 transmembrane protein 56 1 95355481 AI004375 1p21.3 Hs.483512 3

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
201023_at -0.563 9.598 -3.807 1.682e-03 0.080 -1.074 TAF7 TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa 5 -140678240 NM_005642 5q31 Hs.438838 38

spermine transport

transcription factor activity

transcription coactivator activity

nucleus

transcription factor TFIID complex

nucleolus

cytoplasm

Golgi apparatus

transcription initiation from RNA polymerase II promoter

negative regulation of protein kinase activity

positive transcription elongation factor complex b

negative regulation of specific transcription from RNA polymerase II promoter

promoter binding

general RNA polymerase II transcription factor activity

specific transcriptional repressor activity

transcription initiation factor activity

estrogen receptor signaling pathway

transcription factor TFTC complex

histone acetyltransferase binding

negative regulation of histone acetylation

vitamin D receptor binding

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

thyroid hormone receptor binding

Basal transcription factors

225674_at -0.653 8.510 -3.802 1.698e-03 0.081 -1.083 BCAP29 B-cell receptor-associated protein 29 7 107007657, 107008439 AW873330 7q22-q31 Hs.303787 12

endoplasmic reticulum

intracellular protein transport

apoptosis

membrane

integral to membrane

vesicle-mediated transport

 
229492_at 0.344 4.126 3.801 1.701e-03 0.081 -1.085 VANGL1 vang-like 1 (van gogh, Drosophila) 1 115986096 R85437 1p11-p13.1 Hs.515130 12

protein binding

multicellular organismal development

membrane

integral to membrane

Wnt signaling pathway

204950_at 0.530 6.268 3.801 1.701e-03 0.081 -1.085 CARD8 caspase recruitment domain family, member 8 19 -53403154 NM_014959 19q13.33 Hs.446146 Hs.655940 23

protein binding

intracellular

nucleus

cytoplasm

caspase activator activity

NACHT domain binding

protein homodimerization activity

regulation of apoptosis

negative regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of caspase activity

positive regulation of interleukin-1 beta secretion

 
207738_s_at -0.492 8.149 -3.800 1.704e-03 0.081 -1.087 NCKAP1 NCK-associated protein 1 2 -183497849 NM_013436 2q32 Hs.603732 20

protein binding

plasma membrane

apoptosis

central nervous system development

integral to membrane

cell projection

Regulation of actin cytoskeleton

221577_x_at 2.082 4.455 3.799 1.708e-03 0.081 -1.089 GDF15 growth differentiation factor 15 19 18357967 AF003934 19p13.11 Hs.616962 77

cytokine activity

extracellular region

extracellular space

signal transduction

transforming growth factor beta receptor signaling pathway

cell-cell signaling

growth factor activity

 
229109_s_at 0.291 5.161 3.799 1.709e-03 0.081 -1.089 BLVRA biliverdin reductase A 7 43764796 N21095 7p14-cen Hs.488143 17

biliverdin reductase activity

binding

cytoplasm

zinc ion binding

oxidoreductase activity

heme catabolic process

metal ion binding

oxidation reduction

Porphyrin and chlorophyll metabolism

1559413_at -0.515 4.591 -3.798 1.711e-03 0.081 -1.090 TCP11L2 t-complex 11 (mouse)-like 2 12 105220710 AF306858 12q23.3 Hs.696047 1    
219848_s_at 0.504 5.699 3.798 1.712e-03 0.081 -1.091 ZNF432 zinc finger protein 432 19 -57228488 NM_014650 19q13.41 Hs.655934 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
217984_at 0.460 6.335 3.797 1.714e-03 0.081 -1.092 RNASET2 ribonuclease T2 6 -167262993 NM_003730 6q27 Hs.529989 11

RNA binding

endonuclease activity

ribonuclease activity

extracellular region

RNA catabolic process

hydrolase activity

ribonuclease T2 activity

 
217707_x_at -0.588 8.916 -3.797 1.716e-03 0.081 -1.093 SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 9 2005341 AI535683 9p22.3 Hs.298990 63

nucleotide binding

DNA binding

transcription coactivator activity

helicase activity

protein binding

ATP binding

nucleus

nucleoplasm

chromatin remodeling

regulation of transcription from RNA polymerase II promoter

DNA-dependent ATPase activity

positive regulation of specific transcription from RNA polymerase II promoter

negative regulation of specific transcription from RNA polymerase II promoter

SWI/SNF complex

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

 
205750_at 0.569 7.099 3.797 1.717e-03 0.081 -1.093 BPHL biphenyl hydrolase-like (serine hydrolase) 6 3063924 NM_004332 6p25 Hs.10136 12

mitochondrion

cellular amino acid and derivative metabolic process

response to toxin

hydrolase activity

 
1559871_s_at 0.608 4.114 3.796 1.718e-03 0.081 -1.094 LOC100129129 hypothetical protein LOC100129129 8   BC038546 8p23.1 Hs.662094      
200878_at 0.456 10.038 3.796 1.719e-03 0.081 -1.095 EPAS1 endothelial PAS domain protein 1 2 46378066 AF052094 2p21-p16 Hs.468410 101

angiogenesis

response to hypoxia

embryonic placenta development

blood vessel remodeling

regulation of heart rate

RNA polymerase II transcription factor activity, enhancer binding

transcription coactivator activity

signal transducer activity

nucleus

transcription factor complex

transcription factor complex

cytoplasm

regulation of transcription, DNA-dependent

response to oxidative stress

mitochondrion organization

signal transduction

multicellular organismal development

visual perception

transcription factor binding

hemopoiesis

cell differentiation

erythrocyte differentiation

lung development

histone acetyltransferase binding

norepinephrine metabolic process

surfactant homeostasis

sequence-specific DNA binding

regulation of transcription from RNA polymerase II promoter in response to oxidative stress

positive regulation of transcription from RNA polymerase II promoter

protein heterodimerization activity

cell maturation

Pathways in cancer

Renal cell carcinoma

219807_x_at 0.299 6.340 3.796 1.720e-03 0.081 -1.095 RAB4B RAB4B, member RAS oncogene family 19 45976010 NM_016154 19q13.2 Hs.631539 5

nucleotide binding

GTPase activity

GTP binding

intracellular

plasma membrane

small GTPase mediated signal transduction

protein transport

vesicle-mediated transport

 
203846_at -0.520 7.396 -3.793 1.729e-03 0.081 -1.100 TRIM32 tripartite motif-containing 32 9 118489401 BC003154 9q33.1 Hs.591910 18

transcription coactivator activity

intracellular

nucleus

cytoplasm

zinc ion binding

ligase activity

modification-dependent protein catabolic process

protein ubiquitination during ubiquitin-dependent protein catabolic process

ubiquitin binding

protein self-association

fat cell differentiation

metal ion binding

Ubiquitin mediated proteolysis

221295_at 0.327 4.973 3.790 1.740e-03 0.082 -1.106 CIDEA cell death-inducing DFFA-like effector a 18 12244317, 12244627 NM_001279 18 18p11.21 Hs.249129 15

temperature homeostasis

protein binding

intracellular

nucleus

cytoplasm

mitochondrion

mitochondrial envelope

lipid particle

DNA fragmentation involved in apoptosis

lipid metabolic process

cell death

DNA damage response, signal transduction resulting in induction of apoptosis

positive regulation of sequestering of triglyceride

lipid storage

negative regulation of transforming growth factor beta receptor signaling pathway

negative regulation of tumor necrosis factor production

protein homodimerization activity

negative regulation of apoptosis

negative regulation of cytokine secretion

negative regulation of lipid catabolic process

 
37950_at -0.503 7.856 -3.790 1.741e-03 0.082 -1.106 PREP prolyl endopeptidase 6 -105832198 X74496 6q22 Hs.436564 26

serine-type endopeptidase activity

cytoplasm

proteolysis

peptidase activity

 
224709_s_at -0.419 6.971 -3.788 1.746e-03 0.082 -1.109 CDC42SE2 CDC42 small effector 2 5 130627600 AF131831 5q23.3-q31.1 Hs.508829 Hs.713870 8

structural molecule activity

protein binding

cytoplasm

cytoskeleton

plasma membrane

phagocytosis

regulation of cell shape

regulation of signal transduction

 
226284_at -0.676 5.152 -3.788 1.746e-03 0.082 -1.109 ZBTB2 zinc finger and BTB domain containing 2 6 -151726942 BF111616 6q25.1 Hs.520073 6

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
238327_at 0.565 3.656 3.787 1.751e-03 0.082 -1.112 ODF3B outer dense fiber of sperm tails 3B 22 -49315703 AI962367 22q13.33 Hs.531314 6    
203826_s_at 0.388 6.287 3.787 1.752e-03 0.082 -1.112 PITPNM1 phosphatidylinositol transfer protein, membrane-associated 1 11 -67015815 NM_004910 11q13 Hs.372295 17

calcium ion binding

intracellular

membrane fraction

cytoplasm

endoplasmic reticulum

Golgi apparatus

lipid metabolic process

brain development

phototransduction

phosphatidylinositol transporter activity

monolayer-surrounded lipid storage body

protein transport

membrane

 
212388_at -0.797 7.751 -3.785 1.757e-03 0.082 -1.115 USP24 ubiquitin specific peptidase 24 1 -55304619 AB028980 1p32.3 Hs.477009 13

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
230708_at 0.347 4.821 3.785 1.758e-03 0.082 -1.116 PRICKLE1 prickle homolog 1 (Drosophila) 12 -41138407, -41138407, -41138407 AA206141 12q12 Hs.524348 Hs.639400 14

nucleus

cytoplasm

cytosol

zinc ion binding

membrane

nuclear membrane

metal ion binding

Wnt signaling pathway

1565759_at -0.387 5.615 -3.783 1.764e-03 0.082 -1.119 RPL13 ribosomal protein L13 16 88154590, 88154631 BG396520 16q24.3 17p11.2 Hs.410817 17

RNA binding

structural constituent of ribosome

protein binding

intracellular

cytosol

translational elongation

cytosolic ribosome

Ribosome

218764_at 0.569 6.988 3.782 1.767e-03 0.082 -1.120 PRKCH protein kinase C, eta 14 60858267 NM_024064 14q22-q23 Hs.333907 65

nucleotide binding

protein kinase C activity

ATP binding

protein amino acid phosphorylation

intracellular signaling cascade

zinc ion binding

transferase activity

enzyme binding

diacylglycerol binding

metal ion binding

Vascular smooth muscle contraction

Tight junction

215847_at 0.672 3.540 3.782 1.770e-03 0.082 -1.122 HERC2P3 hect domain and RLD 2 pseudogene 3 15   BC000975 15q11.1 Hs.531509 Hs.655732 5

ubiquitin-protein ligase activity

protein ubiquitination

metal ion binding

 
225131_at -0.637 7.856 -3.782 1.770e-03 0.082 -1.122 ZRANB1 zinc finger, RAN-binding domain containing 1 10 126620681 H60265 10q26.13 Hs.595158 3

ubiquitin-protein ligase activity

protein binding

intracellular

nucleus

cytoplasm

peptidase activity

cysteine-type peptidase activity

zinc ion binding

modification-dependent protein catabolic process

positive regulation of Wnt receptor signaling pathway

metal ion binding

 
209244_s_at -0.312 8.255 -3.780 1.775e-03 0.083 -1.124 KIF1C kinesin family member 1C 17 4841999 BE885926 17p13.2 Hs.435120 8

nucleotide binding

microtubule motor activity

ATP binding

endoplasmic reticulum

Golgi apparatus

microtubule

retrograde vesicle-mediated transport, Golgi to ER

microtubule-based movement

 
222417_s_at -0.595 8.144 -3.778 1.783e-03 0.083 -1.129 SNX5 sorting nexin 5 20 -17870243, -17870243 AF121855 20p11 Hs.316890 14

protein binding

cell communication

protein transport

phosphoinositide binding

 
212549_at -0.580 7.854 -3.778 1.784e-03 0.083 -1.129 STAT5B signal transducer and activator of transcription 5B 17 -37604720 BE645861 17q11.2 Hs.719121 128

allantoin metabolic process

luteinization

natural killer cell differentiation

transcription factor activity

signal transducer activity

calcium ion binding

protein binding

nucleus

cytoplasm

citrate metabolic process

2-oxoglutarate metabolic process

succinate metabolic process

oxaloacetate metabolic process

isoleucine metabolic process

valine metabolic process

creatine metabolic process

fatty acid metabolic process

signal transduction

female pregnancy

lactation

positive regulation of cell proliferation

regulation of steroid metabolic process

cytokine-mediated signaling pathway

taurine metabolic process

lipid storage

regulation of cell adhesion

regulation of epithelial cell differentiation

response to estradiol stimulus

cellular response to hormone stimulus

T cell differentiation in the thymus

glucocorticoid receptor binding

positive regulation of multicellular organism growth

positive regulation of activated T cell proliferation

progesterone metabolic process

T cell homeostasis

negative regulation of apoptosis

positive regulation of interleukin-2 biosynthetic process

positive regulation of B cell differentiation

positive regulation of gamma-delta T cell differentiation

negative regulation of erythrocyte differentiation

positive regulation of survival gene product expression

positive regulation of mitotic cell cycle

positive regulation of transcription from RNA polymerase II promoter

creatinine metabolic process

development of secondary female sexual characteristics

development of secondary male sexual characteristics

Peyer's patch development

positive regulation of inflammatory response

JAK-STAT cascade involved in growth hormone signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

Jak-STAT signaling pathway

Pathways in cancer

Chronic myeloid leukemia

Acute myeloid leukemia

222108_at 0.512 4.170 3.775 1.793e-03 0.083 -1.134 AMIGO2 adhesion molecule with Ig-like domain 2 12 -45756649, -45755757 AC004010 12q13.11 Hs.121520 7

protein binding

nucleus

plasma membrane

cell adhesion

homophilic cell adhesion

heterophilic cell adhesion

integral to membrane

negative regulation of programmed cell death

 
208997_s_at 0.790 7.151 3.775 1.794e-03 0.083 -1.134 UCP2 uncoupling protein 2 (mitochondrial, proton carrier) 11 -73363363 U82819 11q13 Hs.80658 153

response to superoxide

binding

mitochondrion

mitochondrial inner membrane

transport

mitochondrial transport

proton transport

membrane

integral to membrane

 
228962_at -0.604 7.188 -3.774 1.796e-03 0.083 -1.136 PDE4D phosphodiesterase 4D, cAMP-specific (phosphodiesterase E3 dunce homolog, Drosophila) 5 -58300622, -58300622 BF507941 5q12 Hs.117545 89

3',5'-cyclic-AMP phosphodiesterase activity

soluble fraction

insoluble fraction

cytoplasm

centrosome

cytoskeleton

signal transduction

membrane

hydrolase activity

metal ion binding

Purine metabolism

212071_s_at 0.430 9.860 3.773 1.801e-03 0.083 -1.138 SPTBN1 spectrin, beta, non-erythrocytic 1 2 54536957, 54639034 BE968833 2p21 Hs.503178 Hs.705692 46

actin binding

structural constituent of cytoskeleton

calmodulin binding

nucleus

nucleolus

cytoplasm

plasma membrane

common-partner SMAD protein phosphorylation

SMAD protein nuclear translocation

spectrin

cortical cytoskeleton

M band

actin filament capping

 
216210_x_at 0.340 7.426 3.773 1.802e-03 0.083 -1.138 TRIOBP TRIO and F-actin binding protein 22 36422940, 36472186, 36472186 AA046650 22q13.1 Hs.533030 20

actin binding

protein binding

nucleus

cytoplasm

actin cytoskeleton

GTP-Rho binding

actin modification

myosin II binding

barbed-end actin filament capping

 
222700_at -0.693 7.622 -3.772 1.804e-03 0.083 -1.139 ATL2 atlastin GTPase 2 2 -38375534 AV700003 2p22.2-p22.1 Hs.594950 8

nucleotide binding

GTPase activity

GTP binding

membrane

integral to membrane

 
220617_s_at -0.389 8.309 -3.771 1.807e-03 0.083 -1.141 ZNF532 zinc finger protein 532 18 54681040 NM_018181 18q21.32 Hs.529023 Hs.607676 4

DNA binding

intracellular

nucleus

nucleolus

Golgi apparatus

zinc ion binding

regulation of transcription

metal ion binding

 
209015_s_at -0.469 10.020 -3.771 1.809e-03 0.083 -1.142 DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 7 156822470, 156822471 BC002446 7q36.3 Hs.593923 Hs.719116 25

ATPase activator activity

DNA binding

nucleus

cytoplasm

protein folding

response to unfolded protein

transcription repressor activity

heat shock protein binding

negative regulation of caspase activity

intermediate filament organization

negative regulation of transcription, DNA-dependent

perinuclear region of cytoplasm

chaperone binding

 
203566_s_at -0.568 11.889 -3.770 1.811e-03 0.083 -1.143 AGL amylo-1, 6-glucosidase, 4-alpha-glucanotransferase 1 100088227, 100088632, 100089118, 100099353 NM_000645 1p21 Hs.904 26

4-alpha-glucanotransferase activity

amylo-alpha-1,6-glucosidase activity

amylo-alpha-1,6-glucosidase activity

cytosol

carbohydrate metabolic process

glycogen biosynthetic process

metabolic process

transferase activity, transferring glycosyl groups

hydrolase activity, acting on glycosyl bonds

isoamylase complex

cation binding

Starch and sucrose metabolism

Metabolic pathways

1552731_at -1.597 8.049 -3.769 1.815e-03 0.083 -1.145 ABRA actin-binding Rho activating protein 8 -107840886 NM_139166 8q23.1 Hs.374668 12

protein import into nucleus, translocation

transcription coactivator activity

actin binding

cytoplasm

plasma membrane

protein transport

actin cytoskeleton

sarcomere

positive regulation of Rho protein signal transduction

positive regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

positive regulation of transcription factor activity

intracellular protein transmembrane transport

 
226317_at -0.621 6.772 -3.768 1.819e-03 0.083 -1.147 PPP4R2 protein phosphatase 4, regulatory subunit 2 3 73128808 AI983837 3p13 Hs.431092 7

protein binding

centrosome

mRNA processing

protein modification process

RNA splicing

 
1553613_s_at 0.609 4.803 3.768 1.820e-03 0.083 -1.148 FOXC1 forkhead box C1 6 1555679 NM_001453 6p25 Hs.348883 51

skeletal system development

ossification

ovarian follicle development

blood vessel development

ureteric bud development

in utero embryonic development

kidney development

lymph vessel development

blood vessel remodeling

heart morphogenesis

RNA polymerase II transcription factor activity, enhancer binding

nucleus

nucleus

nuclear heterochromatin

anti-apoptosis

Notch signaling pathway

brain development

transcription factor binding

DNA bending activity

germ cell migration

neural crest cell development

transcription activator activity

collagen fibril organization

glycosaminoglycan metabolic process

lacrimal gland development

embryonic heart tube development

odontogenesis of dentine-containing tooth

camera-type eye development

sequence-specific DNA binding

negative regulation of mitotic cell cycle

positive regulation of transcription from RNA polymerase II promoter

regulation of organ growth

vascular endothelial growth factor receptor signaling pathway

paraxial mesoderm formation

mesenchymal cell differentiation

artery morphogenesis

regulation of blood vessel size

ventricular cardiac muscle morphogenesis

cardiac muscle cell proliferation

 
224711_at -0.460 7.839 -3.766 1.828e-03 0.084 -1.152 YY1 YY1 transcription factor 14 99774854 AI670903 14q Hs.388927 97

transcription factor activity

transcription coactivator activity

transcription corepressor activity

protein binding

intracellular

nucleus

transcription factor complex

plasma membrane

regulation of transcription from RNA polymerase II promoter

zinc ion binding

anterior/posterior pattern formation

nuclear matrix

PcG protein complex

metal ion binding

camera-type eye morphogenesis

 
210284_s_at -0.552 6.650 -3.766 1.829e-03 0.084 -1.153 MAP3K7IP2 mitogen-activated protein kinase kinase kinase 7 interacting protein 2 6 149680755 AF241230 6q25.1-q25.3 Hs.269775 39

protein binding

intracellular

cytoplasm

cytosol

cytosol

zinc ion binding

membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of I-kappaB kinase/NF-kappaB cascade

metal ion binding

MAPK signaling pathway

Toll-like receptor signaling pathway

227889_at 0.345 4.849 3.764 1.834e-03 0.084 -1.155 LPCAT2 lysophosphatidylcholine acyltransferase 2 16 54100413 AI765437 16q12.2 Hs.460857 4

calcium ion binding

endoplasmic reticulum

Golgi apparatus

Golgi stack

platelet activating factor biosynthetic process

metabolic process

acyltransferase activity

phospholipid biosynthetic process

membrane

integral to membrane

membrane organization

transferase activity

1-acylglycerophosphocholine O-acyltransferase activity

1-alkylglycerophosphocholine O-acetyltransferase activity

 
220419_s_at -0.631 9.493 -3.764 1.837e-03 0.084 -1.156 USP25 ubiquitin specific peptidase 25 21 16024366 NM_013396 21q11.2 Hs.473370 11

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

protein modification process

proteolysis

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
1556051_a_at 0.608 4.579 3.763 1.839e-03 0.084 -1.157 BICD1 bicaudal D homolog 1 (Drosophila) 12 32151451 CA777994 12p11.2-p11.1 Hs.505202 17

structural constituent of cytoskeleton

protein binding

Golgi apparatus

cytoskeleton

RNA processing

transport

intracellular mRNA localization

anatomical structure morphogenesis

 
218694_at -0.606 8.432 -3.762 1.841e-03 0.084 -1.158 ARMCX1 armadillo repeat containing, X-linked 1 X 100692169 NM_016608 Xq21.33-q22.2 Hs.9728 8

binding

membrane

integral to membrane

 
205841_at -0.814 5.502 -3.760 1.850e-03 0.084 -1.163 JAK2 Janus kinase 2 9 4975244 NM_004972 9p24 Hs.656213 588

nucleotide binding

non-membrane spanning protein tyrosine kinase activity

Janus kinase activity

receptor binding

growth hormone receptor binding

interleukin-12 receptor binding

ATP binding

nucleus

cytoplasm

cytoskeleton

caveola

apoptosis

cell motion

enzyme linked receptor protein signaling pathway

tyrosine phosphorylation of STAT protein

STAT protein nuclear translocation

mesoderm development

negative regulation of cell proliferation

positive regulation of phosphoinositide 3-kinase cascade

membrane

transferase activity

myeloid cell differentiation

SH2 domain binding

positive regulation of tyrosine phosphorylation of Stat3 protein

positive regulation of tyrosine phosphorylation of Stat5 protein

negative regulation of DNA binding

response to antibiotic

positive regulation of peptidyl-tyrosine phosphorylation

JAK-STAT cascade involved in growth hormone signaling pathway

positive regulation of growth hormone receptor signaling pathway

Chemokine signaling pathway

Jak-STAT signaling pathway

Adipocytokine signaling pathway

217741_s_at -0.877 8.246 -3.759 1.856e-03 0.084 -1.166 ZFAND5 zinc finger, AN1-type domain 5 9 -74156160 AW471220 9q13-q21 Hs.406096 6

in utero embryonic development

vasculature development

respiratory system process

molecular_function

DNA binding

cellular_component

biological_process

zinc ion binding

fibroblast migration

metal ion binding

platelet-derived growth factor receptor signaling pathway

skeletal system morphogenesis

smooth muscle tissue development

face development

 
228434_at 0.566 8.607 3.759 1.856e-03 0.084 -1.166 BTNL9 butyrophilin-like 9 5 180399830 AA806965 5q35.3 Hs.546502 4

membrane

integral to membrane

 
210785_s_at 0.423 3.943 3.757 1.861e-03 0.084 -1.168 C1orf38 chromosome 1 open reading frame 38 1 28071641 AB035482 1p35.3 Hs.10649 8

cell adhesion

 
236887_at -0.474 3.981 -3.757 1.861e-03 0.084 -1.168 KIN KIN, antigenic determinant of recA protein homolog (mouse) 10 -7837372 AA768850 10p15-p14 Hs.397918 17

DNA binding

double-stranded DNA binding

RNA binding

intracellular

nucleus

cytoplasm

DNA replication

DNA repair

DNA recombination

mRNA processing

response to DNA damage stimulus

zinc ion binding

nuclear matrix

interspecies interaction between organisms

metal ion binding

 
227812_at -0.820 4.416 -3.757 1.861e-03 0.084 -1.169 TNFRSF19 tumor necrosis factor receptor superfamily, member 19 13 23042722, 23051638 BF432648 13q12.11-q12.3 Hs.149168 14

receptor activity

tumor necrosis factor receptor activity

protein binding

mitochondrion

apoptosis

induction of apoptosis

JNK cascade

membrane

integral to membrane

Cytokine-cytokine receptor interaction

230047_at 0.521 3.728 3.755 1.869e-03 0.085 -1.172 FLJ32810 Rho-type GTPase-activating protein FLJ32810 11 100063616 BF439533 11q22.1 Hs.269837 2

GTPase activator activity

intracellular

signal transduction

 
205206_at -1.063 7.950 -3.754 1.875e-03 0.085 -1.175 KAL1 Kallmann syndrome 1 sequence X -8456914 NM_000216 Xp22.32 Hs.521869 35

serine-type endopeptidase inhibitor activity

extracellular matrix structural constituent

protein binding

extracellular region

proteinaceous extracellular matrix

extracellular space

chemotaxis

cell adhesion

axon guidance

cell surface

peptidase inhibitor activity

 
227796_at -0.437 6.329 -3.754 1.875e-03 0.085 -1.176 ZFP62 zinc finger protein 62 homolog (mouse) 5 -180207218, -12668 AW157773 5q35.3 Hs.509227 Hs.719290 6

nucleic acid binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
223298_s_at 0.740 10.065 3.753 1.877e-03 0.085 -1.176 NT5C3 5'-nucleotidase, cytosolic III 7 -33020266, -33020266 AF312735 7p14.3 Hs.487933 22

nucleotide binding

magnesium ion binding

cytoplasm

endoplasmic reticulum

pyrimidine nucleoside metabolic process

5'-nucleotidase activity

5'-nucleotidase activity

2'-phosphotransferase activity

2'-phosphotransferase activity

nucleotide metabolic process

hydrolase activity

Purine metabolism

Pyrimidine metabolism

Nicotinate and nicotinamide metabolism

Biosynthesis of alkaloids derived from histidine and purine

Metabolic pathways

224333_s_at 0.471 8.570 3.752 1.882e-03 0.085 -1.179 MRPS5 mitochondrial ribosomal protein S5 2 -95116678 AB049940 2p11.2-q11.2 Hs.655259 9

RNA binding

structural constituent of ribosome

protein binding

intracellular

mitochondrion

ribosome

translation

 
238465_at 1.166 5.872 3.752 1.882e-03 0.085 -1.179 C5orf35 chromosome 5 open reading frame 35 5 56240859 AI265933 5q11.2 Hs.85950 1    
226994_at -0.549 7.892 -3.752 1.883e-03 0.085 -1.179 DNAJA2 DnaJ (Hsp40) homolog, subfamily A, member 2 16 -45546774 AW057513 16q12.1 Hs.368078 15

protein folding

zinc ion binding

positive regulation of cell proliferation

membrane

heat shock protein binding

metal ion binding

unfolded protein binding

 
227369_at -0.643 7.791 -3.751 1.886e-03 0.085 -1.181 SERBP1 SERPINE1 mRNA binding protein 1 1 -67646080 AW771919 1p31 Hs.719078 22

RNA binding

mRNA 3'-UTR binding

protein binding

nucleus

cytoplasm

regulation of mRNA stability

perinuclear region of cytoplasm

 
217882_at -0.584 10.571 -3.751 1.886e-03 0.085 -1.181 TMEM111 transmembrane protein 111 3 -9980635 NM_018447 3p25.3 Hs.475392 6

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
224733_at 0.418 5.900 3.750 1.887e-03 0.085 -1.182 CMTM3 CKLF-like MARVEL transmembrane domain containing 3 16 65195702, 65195713, 65196067 AL574900 16q21 Hs.298198 7

cytokine activity

extracellular space

chemotaxis

membrane

integral to membrane

 
230560_at 0.553 5.350 3.750 1.888e-03 0.085 -1.182 STXBP6 syntaxin binding protein 6 (amisyn) 14 -24351143 N21096 14q12 Hs.508958 6

cytoplasm

membrane

integral to membrane

vesicle-mediated transport

 
222394_at -0.496 7.107 -3.749 1.893e-03 0.085 -1.184 PDCD6IP programmed cell death 6 interacting protein 3 33815069, 33815069, 33845133 BG484789 3p22.3 Hs.475896 65

protein binding

cytoplasm

centrosome

cytosol

apoptosis

cell cycle

protein transport

melanosome

interspecies interaction between organisms

cell division

Endocytosis

221537_at 0.249 6.785 3.746 1.906e-03 0.085 -1.190 PLXNA1 plexin A1 3 128190191 T16388 3q21.3 Hs.432329 18

receptor activity

protein binding

cellular_component

intracellular

membrane fraction

signal transduction

multicellular organismal development

membrane

integral to membrane

semaphorin receptor activity

Axon guidance

207677_s_at 0.507 3.661 3.745 1.909e-03 0.085 -1.192 NCF4 neutrophil cytosolic factor 4, 40kDa 22 35586975 NM_013416 22q13.1 Hs.474781 51

cytoplasm

cytosol

immune response

cell communication

membrane

phosphoinositide binding

NADPH oxidase complex

protein dimerization activity

oxidation reduction

Leukocyte transendothelial migration

213614_x_at 1.175 11.708 3.744 1.912e-03 0.085 -1.193 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 6 -74282193 BE786672 6q14.1 Hs.520703 Hs.586423 Hs.644639 Hs.697944 Hs.708256 Hs.713109 86

nucleotide binding

translation elongation factor activity

GTPase activity

protein binding

GTP binding

cytoplasm

cytosol

eukaryotic translation elongation factor 1 complex

translational elongation

translational elongation

 
217943_s_at -0.625 8.997 -3.744 1.912e-03 0.085 -1.193 MAP7D1 MAP7 domain containing 1 1 36394389 NM_018067 1p34.3 Hs.700595 7

spindle

 
219959_at 1.203 5.116 3.743 1.915e-03 0.085 -1.195 MOCOS molybdenum cofactor sulfurase 18 32021477 NM_017947 18q12 Hs.405028 10

cellular_component

Mo-molybdopterin cofactor biosynthetic process

metabolic process

Mo-molybdopterin cofactor sulfurase activity

lyase activity

molybdenum ion binding

pyridoxal phosphate binding

molybdopterin cofactor metabolic process

 
207564_x_at -0.682 6.670 -3.743 1.918e-03 0.086 -1.196 OGT O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) X 70669657 NM_003605 Xq13 Hs.405410 47

protein binding

nucleus

cytoplasm

cytosol

protein amino acid O-linked glycosylation

signal transduction

response to nutrient

acetylglucosaminyltransferase activity

transferase activity, transferring glycosyl groups

MLL5-L complex

O-Glycan biosynthesis

Metabolic pathways

208933_s_at 0.375 5.692 3.742 1.919e-03 0.086 -1.197 LGALS8 lectin, galactoside-binding, soluble, 8 1 234748187, 234753361, 234753699 AI659005 1q42-q43 Hs.4082 Hs.708114 29

sugar binding

extracellular space

cytoplasm

 
232231_at 0.556 3.776 3.742 1.922e-03 0.086 -1.198 RUNX2 runt-related transcription factor 2 6 45404031, 45497891 AL353944 6p21 Hs.535845 152

osteoblast differentiation

transcription factor activity

RNA polymerase II transcription factor activity

protein binding

ATP binding

nucleus

regulation of transcription, DNA-dependent

negative regulation of transcription

transcription activator activity

 
224579_at 2.607 7.933 3.741 1.923e-03 0.086 -1.199 SLC38A1 solute carrier family 38, member 1 12 -44863107 BF247552 12q13.11 Hs.694701 11

sodium:amino acid symporter activity

membrane fraction

plasma membrane

ion transport

sodium ion transport

glutamine transport

L-glutamine transmembrane transporter activity

symporter activity

integral to membrane

axon

sodium ion binding

 
206544_x_at -0.762 7.914 -3.740 1.931e-03 0.086 -1.202 SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 9 2005341 NM_003070 9p22.3 Hs.298990 63

nucleotide binding

DNA binding

transcription coactivator activity

helicase activity

protein binding

ATP binding

nucleus

nucleoplasm

chromatin remodeling

regulation of transcription from RNA polymerase II promoter

DNA-dependent ATPase activity

positive regulation of specific transcription from RNA polymerase II promoter

negative regulation of specific transcription from RNA polymerase II promoter

SWI/SNF complex

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

 
201222_s_at -0.524 8.610 -3.738 1.935e-03 0.086 -1.205 RAD23B RAD23 homolog B (S. cerevisiae) 9 109085364 AL527365 9q31.2 Hs.521640 54

nucleotide-excision repair, DNA damage removal

damaged DNA binding

single-stranded DNA binding

protein binding

nucleus

nucleoplasm

cytoplasm

cytosol

response to DNA damage stimulus

modification-dependent protein catabolic process

proteasomal ubiquitin-dependent protein catabolic process

protein complex

Nucleotide excision repair

210275_s_at -0.746 10.431 -3.738 1.938e-03 0.086 -1.206 ZFAND5 zinc finger, AN1-type domain 5 9 -74156160 AF062347 9q13-q21 Hs.406096 6

in utero embryonic development

vasculature development

respiratory system process

molecular_function

DNA binding

cellular_component

biological_process

zinc ion binding

fibroblast migration

metal ion binding

platelet-derived growth factor receptor signaling pathway

skeletal system morphogenesis

smooth muscle tissue development

face development

 
213661_at 0.599 5.784 3.737 1.939e-03 0.086 -1.207 PAMR1 peptidase domain containing associated with muscle regeneration 1 11 -35409951 AI671186 11p13 Hs.55044 4

catalytic activity

serine-type endopeptidase activity

extracellular region

proteolysis

 
218919_at -0.403 7.043 -3.737 1.940e-03 0.086 -1.207 ZFAND1 zinc finger, AN1-type domain 1 8 -82776512 NM_024699 8q21.13 Hs.655453 4

zinc ion binding

metal ion binding

 
215293_s_at 0.260 6.207 3.737 1.942e-03 0.086 -1.208 PGAP2 post-GPI attachment to proteins 2 11 3775529, 3775624, 3775707, 3775765, 3785815, 3786341 AL049261 11p15.5 Hs.133968 5

Golgi membrane

endoplasmic reticulum

endoplasmic reticulum membrane

Golgi apparatus

GPI anchor biosynthetic process

protein transporter activity

membrane

integral to membrane

 
209112_at -0.582 9.602 -3.736 1.945e-03 0.086 -1.210 CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1) 12 12761568 BC001971 12p13.1-p12 Hs.238990 442

regulation of cyclin-dependent protein kinase activity

G1/S transition of mitotic cell cycle

protein kinase inhibitor activity

cyclin-dependent protein kinase inhibitor activity

transforming growth factor beta receptor, cytoplasmic mediator activity

protein binding

nucleus

cytoplasm

cytosol

induction of apoptosis

cell cycle

cell cycle arrest

negative regulation of cell proliferation

negative regulation of cell growth

negative regulation of gene-specific transcription

negative regulation of kinase activity

negative regulation of phosphorylation

autophagic cell death

ErbB signaling pathway

Cell cycle

Pathways in cancer

Prostate cancer

Chronic myeloid leukemia

Small cell lung cancer

205967_at 0.416 8.951 3.735 1.949e-03 0.086 -1.212 HIST1H4C histone cluster 1, H4c 6 26212154 NM_003542 6p21.3 Hs.46423 10  

Systemic lupus erythematosus

209406_at -0.465 8.221 -3.734 1.951e-03 0.086 -1.212 BAG2 BCL2-associated athanogene 2 6 57145062 AF095192 6p12.1-p11.2 Hs.719303 16

protein binding

protein folding

apoptosis

protein metabolic process

 
215116_s_at 0.434 5.277 3.734 1.953e-03 0.086 -1.213 DNM1 dynamin 1 9 130005483 AF035321 9q34 Hs.522413 77

nucleotide binding

motor activity

GTPase activity

protein binding

GTP binding

cytoplasm

cytoskeleton

microtubule

receptor-mediated endocytosis

hydrolase activity

Endocytosis

Fc gamma R-mediated phagocytosis

203100_s_at -0.599 5.704 -3.733 1.956e-03 0.086 -1.215 CDYL chromodomain protein, Y-like 6 4651391, 4721678, 4781330, 4835224 NM_004824 6p25.1 Hs.269092 8

chromatin

chromatin binding

histone acetyltransferase activity

nucleus

chromatin assembly or disassembly

spermatogenesis

metabolic process

acyltransferase activity

transferase activity

regulation of transcription

 
209451_at -0.633 7.938 -3.733 1.957e-03 0.086 -1.215 TANK TRAF family member-associated NFKB activator 2 161701711, 161701711 U59863 2q24-q31 Hs.132257 22

protein binding

cytoplasm

signal transduction

zinc ion binding

metal ion binding

RIG-I-like receptor signaling pathway

229088_at 0.568 4.195 3.733 1.958e-03 0.086 -1.216 ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 6 132170848 BF591996 6q22-q23 Hs.527295 107

nucleic acid binding

phosphodiesterase I activity

nucleotide diphosphatase activity

nucleotide diphosphatase activity

scavenger receptor activity

insulin receptor binding

protein binding

ATP binding

extracellular space

plasma membrane

plasma membrane

generation of precursor metabolites and energy

phosphate metabolic process

immune response

metabolic process

nucleoside triphosphate catabolic process

cell surface

integral to membrane

basolateral plasma membrane

hydrolase activity

polysaccharide binding

negative regulation of cell growth

regulation of bone mineralization

inorganic diphosphate transport

cellular phosphate ion homeostasis

sequestering of triglyceride

biomineral formation

negative regulation of protein amino acid autophosphorylation

cellular response to insulin stimulus

protein homodimerization activity

negative regulation of fat cell differentiation

negative regulation of glycogen biosynthetic process

negative regulation of glucose import

negative regulation of insulin receptor signaling pathway

metal ion binding

nucleoside-triphosphate diphosphatase activity

3'-phosphoadenosine 5'-phosphosulfate metabolic process

3'-phosphoadenosine 5'-phosphosulfate binding

Purine metabolism

Starch and sucrose metabolism

Riboflavin metabolism

Nicotinate and nicotinamide metabolism

Pantothenate and CoA biosynthesis

Metabolic pathways

222128_at 0.491 4.525 3.732 1.959e-03 0.086 -1.216 NSUN6 NOL1/NOP2/Sun domain family, member 6 10 -18874269 U80764 10p12.31 Hs.396175 4

RNA binding

methyltransferase activity

transferase activity

 
222586_s_at -1.041 7.612 -3.732 1.960e-03 0.086 -1.217 OSBPL11 oxysterol binding protein-like 11 3 -126730397 AI884890 3q21 Hs.477440 12

lipid transport

steroid metabolic process

 
212251_at -0.522 9.406 -3.730 1.968e-03 0.086 -1.220 MTDH metadherin 8 98725582 AI972475 8q22.1 Hs.377155 23

negative regulation of transcription from RNA polymerase II promoter

protein binding

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

tight junction

membrane

integral to membrane

cell junction

nuclear membrane

perinuclear region of cytoplasm

NF-kappaB binding

positive regulation of NF-kappaB transcription factor activity

 
226364_at 0.432 5.856 3.730 1.969e-03 0.086 -1.221 HIP1 huntingtin interacting protein 1 7 -75001344 AU145049 7q11.23 Hs.329266 Hs.619089 31

actin binding

structural constituent of cytoskeleton

membrane fraction

nucleus

cytoplasm

Golgi apparatus

cytoskeleton

endocytosis

induction of apoptosis

activation of caspase activity

cell death

membrane

cell differentiation

clathrin binding

clathrin coated vesicle membrane

cytoplasmic vesicle

phosphoinositide binding

regulation of apoptosis

regulation of transcription

positive regulation of receptor-mediated endocytosis

clathrin coat assembly

Huntington's disease

244428_at 0.360 4.351 3.729 1.973e-03 0.086 -1.223 DNMT3A DNA (cytosine-5-)-methyltransferase 3 alpha 2 -25357824, -25309348, -25309348, -25309348 AW572279 2p23 Hs.515840 54

euchromatin

DNA binding

DNA (cytosine-5-)-methyltransferase activity

protein binding

nucleus

cytoplasm

DNA methylation

genetic imprinting

methyltransferase activity

zinc ion binding

nuclear matrix

transferase activity

metal ion binding

Cysteine and methionine metabolism

Metabolic pathways

1559870_at 0.363 5.947 3.726 1.987e-03 0.087 -1.229 LOC100129129 hypothetical protein LOC100129129 8   BC038546 8p23.1 Hs.662094      
213624_at -0.667 8.799 -3.725 1.988e-03 0.087 -1.230 SMPDL3A sphingomyelin phosphodiesterase, acid-like 3A 6 123151669 AA873600 6q22.31 Hs.486357 5

sphingomyelin phosphodiesterase activity

protein binding

extracellular region

extracellular space

sphingomyelin catabolic process

metabolic process

hydrolase activity, acting on glycosyl bonds

 
210845_s_at 0.302 5.166 3.725 1.989e-03 0.087 -1.230 PLAUR plasminogen activator, urokinase receptor 19 -48844571, -48842087 U08839 19q13 Hs.466871 234

extracellular region

plasma membrane

plasma membrane

cell motion

chemotaxis

signal transduction

blood coagulation

cell surface

integral to membrane

attachment of GPI anchor to protein

extrinsic to membrane

enzyme binding

regulation of proteolysis

U-plasminogen activator receptor activity

anchored to membrane

skeletal muscle regeneration

Complement and coagulation cascades

213911_s_at -0.536 9.588 -3.722 2.001e-03 0.087 -1.236 H2AFZ H2A histone family, member Z 4 -101088266 BF718636 4q24 Hs.119192 37

nucleosome

DNA binding

nucleus

chromosome

nucleosome assembly

Systemic lupus erythematosus

212829_at 0.377 5.744 3.722 2.003e-03 0.087 -1.237 PIP4K2A phosphatidylinositol-5-phosphate 4-kinase, type II, alpha 10 -22863771 BE878277 10p12.2 Hs.57079 24

nucleotide binding

ATP binding

cellular_component

kinase activity

1-phosphatidylinositol-4-phosphate 5-kinase activity

1-phosphatidylinositol-5-phosphate 4-kinase activity

phosphorylation

transferase activity

phosphatidylinositol metabolic process

Inositol phosphate metabolism

Phosphatidylinositol signaling system

Regulation of actin cytoskeleton

202751_at -0.478 3.722 -3.721 2.004e-03 0.087 -1.237 TFIP11 tuftelin interacting protein 11 22 -25217894 NM_012143 22q12.1 Hs.20225 19

nucleic acid binding

protein binding

proteinaceous extracellular matrix

intracellular

nucleus

spliceosomal complex

cytoplasm

mRNA processing

RNA splicing

nuclear speck

biomineral formation

 
239272_at 0.271 4.882 3.721 2.006e-03 0.087 -1.238 MMP28 matrix metallopeptidase 28 17 -31129621, -31116988 AI927208 17q11-q21.1 Hs.380710 13

metalloendopeptidase activity

calcium ion binding

extracellular region

proteinaceous extracellular matrix

proteolysis

metabolic process

peptidase activity

zinc ion binding

 
200738_s_at -0.677 11.446 -3.721 2.007e-03 0.087 -1.239 PGK1 phosphoglycerate kinase 1 X 77246321 NM_000291 Xq13 Hs.78771 52

nucleotide binding

phosphoglycerate kinase activity

ATP binding

cytoplasm

glycolysis

phosphorylation

transferase activity

Glycolysis / Gluconeogenesis

Carbon fixation in photosynthetic organisms

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

223089_at -0.847 7.513 -3.720 2.008e-03 0.087 -1.239 VEZT vezatin, adherens junctions transmembrane protein 12 94135652 AI805297 12q22 Hs.24135 8

acrosomal vesicle

nucleus

plasma membrane

adherens junction

integral to membrane

cell junction

 
211038_s_at -0.509 7.760 -3.717 2.023e-03 0.087 -1.246 CROCCL1 ciliary rootlet coiled-coil, rootletin-like 1 1 -16817339 BC006312 1p36.13 Hs.631865 2    
208306_x_at 0.713 8.814 3.717 2.023e-03 0.087 -1.246 HLA-DRB4 major histocompatibility complex, class II, DR beta 4 6   NM_021983 6p21.3 Hs.534322 Hs.696211 Hs.716081 135

antigen processing and presentation of peptide or polysaccharide antigen via MHC class II

integral to plasma membrane

immune response

signal transduction

pathogenesis

membrane

integral to membrane

MHC class II receptor activity

MHC class II protein complex

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Hematopoietic cell lineage

Type I diabetes mellitus

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

226660_at -0.580 8.434 -3.717 2.024e-03 0.087 -1.246 RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 17 55325224 AI142096 17q23.1 Hs.463642 123

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

cytosol

protein amino acid phosphorylation

signal transduction

transferase activity

synaptosome

cell junction

synapse

ErbB signaling pathway

mTOR signaling pathway

TGF-beta signaling pathway

Fc gamma R-mediated phagocytosis

Insulin signaling pathway

Acute myeloid leukemia

204892_x_at 1.251 11.831 3.715 2.032e-03 0.088 -1.250 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 6 -74282193 NM_001402 6q14.1 Hs.520703 Hs.586423 Hs.644639 Hs.697944 Hs.708256 Hs.713109 86

nucleotide binding

translation elongation factor activity

GTPase activity

protein binding

GTP binding

cytoplasm

cytosol

eukaryotic translation elongation factor 1 complex

translational elongation

translational elongation

 
206241_at -0.764 5.551 -3.714 2.035e-03 0.088 -1.251 KPNA5 karyopherin alpha 5 (importin alpha 6) 6 117109059 NM_002269 6q22.1 Hs.182971 46

protein binding

nucleus

nuclear pore

cytoplasm

NLS-bearing substrate import into nucleus

intracellular protein transport

protein transporter activity

 
226251_at -0.477 5.926 -3.710 2.050e-03 0.088 -1.259 ASXL2 additional sex combs like 2 (Drosophila) 2 -25815756 AW295549 2p24.1 Hs.594386 6

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
240602_at -0.447 2.954 -3.710 2.051e-03 0.088 -1.259 HBS1L HBS1-like (S. cerevisiae) 6 -135398687, -135323215, -135323213 AI801875 6q23-q24 Hs.378532 12

nucleotide binding

translation elongation factor activity

GTPase activity

GTP binding

translation

signal transduction

 
34408_at -0.565 10.274 -3.710 2.053e-03 0.088 -1.260 RTN2 reticulon 2 19 -50680389, -50680389, -50680389 AF004222 19q13.32 Hs.47517 10

signal transducer activity

endoplasmic reticulum

signal transduction

membrane

integral to membrane

integral to endoplasmic reticulum membrane

 
200830_at -0.338 9.581 -3.709 2.058e-03 0.088 -1.262 PSMD2 proteasome (prosome, macropain) 26S subunit, non-ATPase, 2 3 185499715 NM_002808 3q27.1 Hs.518464 45

proteasome complex

protein binding

cytosol

proteasome regulatory particle

enzyme regulator activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

regulation of protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

220753_s_at 0.441 6.227 3.708 2.059e-03 0.088 -1.262 CRYL1 crystallin, lambda 1 13 -19875805 NM_015974 13q12.11 Hs.370703 6

binding

cytosol

fatty acid metabolic process

metabolic process

oxidoreductase activity

protein homodimerization activity

L-gulonate 3-dehydrogenase activity

NAD binding

 
238877_at -0.570 8.373 -3.708 2.059e-03 0.088 -1.262 EYA4 eyes absent homolog 4 (Drosophila) 6 133604187 BE674583 6q23 Hs.596680 15

magnesium ion binding

protein tyrosine phosphatase activity

nucleus

cytoplasm

DNA repair

response to DNA damage stimulus

multicellular organismal development

visual perception

metabolic process

anatomical structure morphogenesis

chromatin modification

hydrolase activity

regulation of transcription

 
213317_at -0.614 11.228 -3.708 2.061e-03 0.088 -1.263 CLIC5 chloride intracellular channel 5 6 -45974165, -45974165 AL049313 6p21.1-p12.1 Hs.485489 15

voltage-gated ion channel activity

voltage-gated chloride channel activity

protein binding

insoluble fraction

cytoplasm

Golgi apparatus

centrosome

cell cortex

ion transport

chloride transport

female pregnancy

actin cytoskeleton

membrane

integral to membrane

chloride ion binding

chloride channel complex

 
202582_s_at -0.425 9.914 -3.707 2.063e-03 0.088 -1.264 RANBP9 RAN binding protein 9 6 -13729708 AF306510 6p23 Hs.708182 37

nucleus

cytoplasm

microtubule associated complex

protein complex assembly

microtubule nucleation

Ran GTPase binding

enzyme binding

 
212295_s_at 2.090 5.968 3.707 2.064e-03 0.088 -1.265 SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 13 -28981551 AA148507 13q12-q14 Hs.14846 23

receptor activity

integral to plasma membrane

transport

amino acid transport

amino acid transmembrane transporter activity

arginine transmembrane transporter activity

arginine transport

membrane

 
208203_x_at -0.289 5.783 -3.706 2.067e-03 0.088 -1.266 KIR2DS5 killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 5 19 240800 NM_014513 19q13.4 Hs.714920 48

receptor activity

plasma membrane

integral to plasma membrane

immune response

HLA-C specific inhibitory MHC class I receptor activity

Antigen processing and presentation

Natural killer cell mediated cytotoxicity

202166_s_at -0.779 9.095 -3.706 2.068e-03 0.088 -1.266 PPP1R2 protein phosphatase 1, regulatory (inhibitor) subunit 2 3 -196722511 NM_006241 3q29 Hs.535731 Hs.706920 22

protein serine/threonine phosphatase inhibitor activity

protein binding

carbohydrate metabolic process

glycogen metabolic process

generation of precursor metabolites and energy

regulation of signal transduction

regulation of phosphoprotein phosphatase activity

 
202778_s_at -0.415 6.655 -3.706 2.071e-03 0.088 -1.268 ZMYM2 zinc finger, MYM-type 2 13 19430809 NM_003453 13q11-q12 Hs.644041 29

protein binding

cellular_component

nucleus

biological_process

zinc ion binding

PML body

ubiquitin conjugating enzyme binding

regulation of transcription

metal ion binding

 
201312_s_at 0.607 7.360 3.704 2.078e-03 0.088 -1.271 SH3BGRL SH3 domain binding glutamic acid-rich protein like X 80343958 NM_003022 Xq13.3 Hs.108029 13

SH3/SH2 adaptor activity

nucleus

cytoplasm

SH3 domain binding

 
210027_s_at 0.347 9.080 3.702 2.084e-03 0.088 -1.274 APEX1 APEX nuclease (multifunctional DNA repair enzyme) 1 14 19993129 M80261 14q11.2-q12 Hs.73722 235

magnesium ion binding

DNA binding

transcription coactivator activity

transcription corepressor activity

DNA-(apurinic or apyrimidinic site) lyase activity

endodeoxyribonuclease activity

ribonuclease H activity

phosphodiesterase I activity

uracil DNA N-glycosylase activity

protein binding

intracellular

nucleus

nucleoplasm

cytoplasm

endoplasmic reticulum

centrosome

ribosome

base-excision repair

transcription from RNA polymerase II promoter

response to DNA damage stimulus

3'-5' exonuclease activity

oxidoreductase activity

lyase activity

cell redox homeostasis

perinuclear region of cytoplasm

regulation of DNA binding

Base excision repair

224437_s_at -0.482 8.207 -3.702 2.084e-03 0.088 -1.274 VTA1 Vps20-associated 1 homolog (S. cerevisiae) 6 142510102 BC005937 6q24.1 Hs.431367 12

cytoplasm

endosome

protein transport

membrane

Endocytosis

229732_at 0.563 4.007 3.702 2.087e-03 0.088 -1.275 ZNF823 zinc finger protein 823 19 -11693079 AI417785 19p13.2 Hs.142167 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
221875_x_at 0.557 8.396 3.701 2.088e-03 0.088 -1.275 HLA-F major histocompatibility complex, class I, F 6 29799095, 29799095, 1143812, 1143812, 945922, 945922 AW514210 6p21.3 Hs.519972 68

antigen processing and presentation of peptide antigen via MHC class I

immune response

membrane

integral to membrane

antigen processing and presentation

MHC class I receptor activity

MHC class I protein complex

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

202429_s_at -0.716 8.493 -3.701 2.090e-03 0.088 -1.276 PPP3CA protein phosphatase 3 (formerly 2B), catalytic subunit, alpha isoform 4 -102163609 AL353950 4q21-q24 Hs.435512 59

protein serine/threonine phosphatase activity

iron ion binding

calcium ion binding

calmodulin binding

nucleus

cytoplasm

calcineurin complex

protein amino acid dephosphorylation

zinc ion binding

hydrolase activity

MAPK signaling pathway

Calcium signaling pathway

Apoptosis

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Long-term potentiation

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

204278_s_at -0.565 8.237 -3.701 2.091e-03 0.088 -1.277 EBAG9 estrogen receptor binding site associated, antigen, 9 8 110621104, 110621485 NM_004215 8q23 Hs.409368 55

regulation of cell growth

soluble fraction

Golgi apparatus

plasma membrane

focal adhesion

apoptosis

integral to membrane

apoptotic protease activator activity

 
221073_s_at 0.333 6.206 3.700 2.093e-03 0.088 -1.277 NOD1 nucleotide-binding oligomerization domain containing 1 7 -30430667 NM_006092 7p15-p14 Hs.405153 72

nucleotide binding

ATP binding

intracellular

cytoplasm

induction of apoptosis

activation of caspase activity

inflammatory response

intracellular signaling cascade

caspase activator activity

detection of bacterium

positive regulation of interleukin-6 production

positive regulation of tumor necrosis factor production

positive regulation of stress-activated MAPK cascade

interleukin-8 biosynthetic process

identical protein binding

peptidoglycan binding

regulation of apoptosis

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of JNK cascade

CARD domain binding

defense response to Gram-positive bacterium

protein oligomerization

positive regulation of ERK1 and ERK2 cascade

Epithelial cell signaling in Helicobacter pylori infection

210153_s_at 0.467 7.460 3.700 2.094e-03 0.088 -1.278 ME2 malic enzyme 2, NAD(+)-dependent, mitochondrial 18 46659432 M55905 18q21 6p25-p24 Hs.233119 24

malate dehydrogenase (decarboxylating) activity

binding

mitochondrion

mitochondrial matrix

malate metabolic process

electron carrier activity

oxidoreductase activity

malate dehydrogenase (oxaloacetate-decarboxylating) activity

metal ion binding

NAD or NADH binding

oxidation reduction

Pyruvate metabolism

Biosynthesis of phenylpropanoids

Biosynthesis of alkaloids derived from terpenoid and polyketide

225071_at -0.463 6.013 -3.700 2.094e-03 0.088 -1.278 NUS1 nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) 6 118103309 BG168247 6q22.1 Hs.289008 6

angiogenesis

molecular_function

receptor activity

cellular_component

multicellular organismal development

biological_process

membrane

integral to membrane

transferase activity, transferring alkyl or aryl (other than methyl) groups

cell differentiation

 
223490_s_at -0.418 5.070 -3.699 2.097e-03 0.088 -1.279 EXOSC3 exosome component 3 9 -37770307, -37770307 AF281132 9p11 Hs.602571 Hs.713483 12

3'-5'-exoribonuclease activity

nuclear exosome (RNase complex)

cytoplasmic exosome (RNase complex)

RNA binding

exonuclease activity

protein binding

nucleus

nucleolus

cytoplasm

rRNA processing

hydrolase activity

RNA degradation

1552732_at -1.329 10.048 -3.699 2.097e-03 0.088 -1.280 ABRA actin-binding Rho activating protein 8 -107840886 AL832152 8q23.1 Hs.374668 12

protein import into nucleus, translocation

transcription coactivator activity

actin binding

cytoplasm

plasma membrane

protein transport

actin cytoskeleton

sarcomere

positive regulation of Rho protein signal transduction

positive regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

positive regulation of transcription factor activity

intracellular protein transmembrane transport

 
223805_at -0.578 8.468 -3.699 2.099e-03 0.088 -1.280 OSBPL6 oxysterol binding protein-like 6 2 178767619, 178893216 AF323728 2q31-q32.1 Hs.318775 7

lipid transport

steroid metabolic process

 
209595_at -0.664 6.619 -3.699 2.099e-03 0.088 -1.280 GTF2F2 general transcription factor IIF, polypeptide 2, 30kDa 13 44592630 BC001771 13q14 Hs.654582 50

nucleotide binding

nuclear mRNA splicing, via spliceosome

DNA binding

helicase activity

ATP binding

nucleus

nucleoplasm

transcription factor TFIIF complex

cytoskeleton

transcription initiation from RNA polymerase II promoter

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

ATP-dependent helicase activity

general RNA polymerase II transcription factor activity

hydrolase activity

regulation of transcription

Basal transcription factors

225946_at -0.472 6.897 -3.697 2.106e-03 0.088 -1.283 RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 12 26003235 BG484552 12p12.3 Hs.696433 8

signal transduction

 
224467_s_at 0.310 7.400 3.696 2.110e-03 0.089 -1.285 PDCD2L programmed cell death 2-like 19 39587142 BC006146 19q13.11 Hs.515344 5

cytoplasm

 
201066_at 0.351 11.243 3.695 2.116e-03 0.089 -1.288 CYC1 cytochrome c-1 8 145221947 NM_001916 8q24.3 Hs.289271 23

mitochondrion

mitochondrial inner membrane

transport

membrane

integral to membrane

heme binding

electron transport chain

electron transporter, transferring electrons from CoQH2-cytochrome c reductase complex and cytochrome c oxidase complex activity

metal ion binding

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Cardiac muscle contraction

Alzheimer's disease

Parkinson's disease

Huntington's disease

223960_s_at -0.390 6.790 -3.695 2.117e-03 0.089 -1.288 C16orf5 chromosome 16 open reading frame 5 16 -4500677 AF195661 16p13.3 Hs.654653 6

molecular_function

nucleus

apoptosis

induction of apoptosis

biological_process

tumor necrosis factor-mediated signaling pathway

DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis

 
204220_at 0.391 6.305 3.693 2.123e-03 0.089 -1.291 GMFG glia maturation factor, gamma 19 -44510839 NM_004877 19q13.2 Hs.5210 12

actin binding

protein kinase inhibitor activity

intracellular

protein amino acid phosphorylation

enzyme activator activity

growth factor activity

 
218214_at -0.392 7.224 -3.693 2.125e-03 0.089 -1.292 C12orf44 chromosome 12 open reading frame 44 12 50750024 NM_021934 12q13.13 Hs.9911 4    
228214_at -0.771 7.401 -3.692 2.130e-03 0.089 -1.294 SOX6 SRY (sex determining region Y)-box 6 11 -15944571, -15944571, -15944571 AW242286 11p15.3 Hs.368226 24

transcription factor activity

nucleus

chromatin organization

regulation of transcription, DNA-dependent

multicellular organismal development

muscle organ development

 
228765_at -0.619 8.877 -3.692 2.131e-03 0.089 -1.294 GTF2IRD2 GTF2I repeat domain containing 2 7 -73848419 BG032651 7q11.23 Hs.647017 Hs.647039 7

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

 
212638_s_at -0.761 10.114 -3.691 2.135e-03 0.089 -1.296 WWP1 WW domain containing E3 ubiquitin protein ligase 1 8 87424109 BF131791 8q21 Hs.655189 30

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

intracellular

protein modification process

signal transduction

central nervous system development

negative regulation of transcription

protein ubiquitination

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

interspecies interaction between organisms

entry of virus into host cell

Ubiquitin mediated proteolysis

Endocytosis

200658_s_at 0.397 8.490 3.690 2.136e-03 0.089 -1.296 PHB prohibitin 17 -44836418 AL560017 17q21 Hs.514303 70

protein binding

nucleus

nucleoplasm

mitochondrion

mitochondrial inner membrane

integral to plasma membrane

DNA replication

signal transduction

negative regulation of cell proliferation

membrane

negative regulation of transcription

transcription activator activity

transcription repressor activity

histone deacetylation

regulation of apoptosis

 
220129_at 1.067 4.303 3.690 2.137e-03 0.089 -1.297 SOHLH2 spermatogenesis and oogenesis specific basic helix-loop-helix 2 13 -35640346 NM_017826 13q13.3 Hs.124519 4

DNA binding

nucleus

multicellular organismal development

spermatogenesis

cell differentiation

transcription regulator activity

regulation of transcription

oogenesis

 
218977_s_at 0.466 5.319 3.690 2.139e-03 0.089 -1.298 TRNAU1AP tRNA selenocysteine 1 associated protein 1 1 28752115 NM_017846 1p35.3 Hs.533626 5

nucleotide binding

selenocysteine incorporation

RNA binding

nucleus

cytoplasm

translation

 
203803_at -1.003 7.593 -3.690 2.139e-03 0.089 -1.298 PCYOX1 prenylcysteine oxidase 1 2 70338734 N45309 2p13.3 Hs.567502 13

prenylcysteine oxidase activity

binding

lysosome

oxidoreductase activity

prenylated protein catabolic process

prenylcysteine catabolic process

very-low-density lipoprotein particle

oxidation reduction

 
238557_at 0.312 4.484 3.689 2.142e-03 0.089 -1.299 LOC100144603 hypothetical transcript 22 49368320 R58282 22q13.33 Hs.657275 1    
227862_at 0.556 5.362 3.689 2.143e-03 0.089 -1.300 TRNP1 TMF1-regulated nuclear protein 1 1 27192781 AA037766 1p36.11 Hs.355747 2

nucleus

cell cycle

 
228900_at 0.406 5.374 3.689 2.145e-03 0.089 -1.300 CYTSB cytospin B 17 19930926, 19930926, 19999993, 19999993 AW511308 17p11.2 Hs.431045 9

nucleus

 
213064_at -0.589 6.460 -3.688 2.147e-03 0.089 -1.301 ZC3H14 zinc finger CCCH-type containing 14 14 88099005, 88099443, 88130482 N64802 14q31.3 Hs.325846 7

RNA binding

nucleus

zinc ion binding

metal ion binding

 
1569157_s_at 0.754 4.499 3.687 2.152e-03 0.089 -1.303 ZNF846 zinc finger protein 846 19 -9729150 BC037359 19p13.2 Hs.665717 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
204732_s_at -0.610 6.011 -3.687 2.152e-03 0.089 -1.304 TRIM23 tripartite motif-containing 23 5 -64921262 AI021991 5q12.3 Hs.792 14

Golgi membrane

nucleotide binding

GTPase activity

ubiquitin-protein ligase activity

protein binding

GTP binding

intracellular

nucleus

cytoplasm

lysosomal membrane

Golgi apparatus

small GTPase mediated signal transduction

enzyme activator activity

zinc ion binding

membrane

protein ubiquitination

GDP binding

metal ion binding

 
223852_s_at -0.482 7.293 -3.686 2.154e-03 0.089 -1.304 STK40 serine/threonine kinase 40 1 -36577811 BC005169 1p34.3 Hs.471768 11

nucleotide binding

protein serine/threonine kinase activity

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

transferase activity

 
218695_at 0.624 6.821 3.686 2.155e-03 0.089 -1.305 EXOSC4 exosome component 4 8 145205509 NM_019037 8q24.3 Hs.632041 16

3'-5'-exoribonuclease activity

exosome (RNase complex)

RNA binding

exonuclease activity

protein binding

nucleus

nucleolus

cytoplasm

rRNA processing

RNA processing

hydrolase activity

RNA degradation

224818_at -0.452 8.719 -3.686 2.155e-03 0.089 -1.305 SORT1 sortilin 1 1 -109653714 BE622952 1p21.3-p13.1 Hs.485195 Hs.703487 47

ossification

receptor activity

nucleus

lysosome

early endosome

endoplasmic reticulum

microsome

Golgi apparatus

plasma membrane

coated pit

transport

Golgi to endosome transport

endocytosis

neuropeptide signaling pathway

multicellular organismal development

endosome to lysosome transport

induction of apoptosis by extracellular signals

cell surface

nerve growth factor receptor activity

regulation of gene expression

myotube differentiation

integral to membrane

cytoplasmic membrane-bounded vesicle

vesicle organization

enzyme binding

clathrin-coated vesicle

cell differentiation

neurotensin receptor activity, non-G-protein coupled

endosome transport via multivesicular body sorting pathway

response to insulin stimulus

negative regulation of apoptosis

glucose import

nerve growth factor receptor signaling pathway

plasma membrane to endosome transport

nerve growth factor binding

perinuclear region of cytoplasm

negative regulation of lipoprotein lipase activity

Lysosome

Neurotrophin signaling pathway

1569256_a_at -0.354 5.689 -3.685 2.161e-03 0.089 -1.307 FAM43B family with sequence similarity 43, member B 1 20751518 BC015675 1p36.12 Hs.429179 3    
205839_s_at 0.443 5.250 3.682 2.171e-03 0.089 -1.312 BZRAP1 benzodiazapine receptor (peripheral) associated protein 1 17 -53733592 NM_004758 17q22-q23 Hs.112499 6

cytoplasm

mitochondrion

biological_process

benzodiazepine receptor binding

 
239357_at -1.131 5.476 -3.681 2.176e-03 0.089 -1.314 ATP2B2 ATPase, Ca++ transporting, plasma membrane 2 3 -10340706 AA002211 3p25.3 Hs.268942 30

nucleotide binding

magnesium ion binding

calcium-transporting ATPase activity

calcium ion binding

calmodulin binding

ATP binding

cytoplasm

plasma membrane

ATP biosynthetic process

cation transport

calcium ion transport

sensory perception of sound

metabolic process

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

neuron differentiation

Calcium signaling pathway

227696_at 0.743 8.541 3.681 2.178e-03 0.089 -1.315 EXOSC6 exosome component 6 16 -68841634 AI701408 16q22.1 Hs.660633 Hs.719211 9

3'-5'-exoribonuclease activity

exosome (RNase complex)

RNA binding

exonuclease activity

nucleus

nucleolus

cytoplasm

rRNA processing

RNA processing

hydrolase activity

RNA degradation

213737_x_at 0.350 8.885 3.680 2.181e-03 0.089 -1.316 GOLGA9P golgi autoantigen, golgin subfamily a, 9 pseudogene 15 20806682 AI620911 15q11.2 Hs.375441 2    
238047_at 2.432 5.314 3.678 2.191e-03 0.090 -1.320 RP13-102H20.1 hypothetical protein FLJ30058 X 130019896 AA405456 Xq26.1 Hs.22905 5

intracellular

signal transduction

 
212188_at 0.832 7.397 3.677 2.195e-03 0.090 -1.322 KCTD12 potassium channel tetramerisation domain containing 12 13 -76352304 AA551075 13q22.3 Hs.644125 14

voltage-gated potassium channel activity

protein binding

potassium ion transport

voltage-gated potassium channel complex

membrane

 
210102_at 0.483 4.548 3.675 2.204e-03 0.090 -1.326 VWA5A von Willebrand factor A domain containing 5A 11 123491320, 123491320 BC001234 11q23 Hs.152944 5    
201503_at -0.605 9.351 -3.674 2.208e-03 0.090 -1.327 G3BP1 GTPase activating protein (SH3 domain) binding protein 1 5 151131668 BG500067 5q33.1 Hs.587054 27

nucleotide binding

DNA binding

RNA binding

ATP-dependent DNA helicase activity

ATP-dependent RNA helicase activity

helicase activity

endonuclease activity

protein binding

ATP binding

intracellular

nucleus

cytoplasm

cytosol

plasma membrane

transport

Ras protein signal transduction

hydrolase activity

 
222488_s_at -0.356 9.175 -3.674 2.211e-03 0.090 -1.329 DCTN4 dynactin 4 (p62) 5 -150068502, -150068502 BE218028 5q31-q32 Hs.675564 7

nucleus

cytoplasm

centrosome

cytoskeleton

protein N-terminus binding

Huntington's disease

212990_at -0.525 5.635 -3.673 2.212e-03 0.090 -1.329 SYNJ1 synaptojanin 1 21 -32922939, -32922939 AB020717 21q22.2 Hs.473632 31

RNA binding

inositol or phosphatidylinositol phosphatase activity

phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity

inositol-polyphosphate 5-phosphatase activity

cytoplasm

dephosphorylation

hydrolase activity

synaptic vesicle endocytosis

Inositol phosphate metabolism

Metabolic pathways

Phosphatidylinositol signaling system

205896_at 0.635 4.695 3.673 2.213e-03 0.090 -1.329 SLC22A4 solute carrier family 22 (organic cation/ergothioneine transporter), member 4 5 131658043 NM_003059 5q31.1 Hs.310591 79

nucleotide binding

transporter activity

protein binding

ATP binding

mitochondrion

plasma membrane

integral to plasma membrane

triglyceride metabolic process

ion transport

sodium ion transport

body fluid secretion

secondary active organic cation transmembrane transporter activity

carnitine metabolic process

ion transmembrane transporter activity

carnitine transporter activity

symporter activity

cation:cation antiporter activity

quaternary ammonium group transport

carnitine transport

apical plasma membrane

PDZ domain binding

sodium ion binding

 
1553960_at 0.678 7.328 3.672 2.218e-03 0.090 -1.332 SNX21 sorting nexin family member 21 20 43895876 CA447177 20q13.12 Hs.472854 8

protein binding

cell communication

protein transport

phosphoinositide binding

 
238625_at -2.255 4.577 -3.670 2.227e-03 0.090 -1.335 C1orf168 chromosome 1 open reading frame 168 1 -56957064 AI452457 1p32.2 Hs.437655 3    
230822_at 0.349 4.496 3.668 2.236e-03 0.091 -1.339 TMEM61 transmembrane protein 61 1 55219052 AI766925 1p32.3 Hs.663950 3

membrane

integral to membrane

 
218530_at -0.577 8.336 -3.667 2.240e-03 0.091 -1.341 FHOD1 formin homology 2 domain containing 1 16 -65820792 NM_013241 16q22 Hs.95231 25

actin binding

protein binding

nucleus

cytoplasm

cytoskeleton

cellular component organization

actin cytoskeleton organization

 
201899_s_at -0.348 9.213 -3.667 2.241e-03 0.091 -1.341 UBE2A ubiquitin-conjugating enzyme E2A (RAD6 homolog) X 118592526, 118598325 NM_003336 Xq24-q25 Hs.379466 16

nucleotide binding

chromatin

ubiquitin-protein ligase activity

ATP binding

postreplication repair

ubiquitin-dependent protein catabolic process

response to DNA damage stimulus

positive regulation of cell proliferation

response to UV

ligase activity

ubiquitin protein ligase binding

histone H2A ubiquitination

post-translational protein modification

regulation of protein metabolic process

protein autoubiquitination

Ubiquitin mediated proteolysis

225274_at -0.730 9.882 -3.667 2.242e-03 0.091 -1.342 PCYOX1 prenylcysteine oxidase 1 2 70338734 BF247054 2p13.3 Hs.567502 13

prenylcysteine oxidase activity

binding

lysosome

oxidoreductase activity

prenylated protein catabolic process

prenylcysteine catabolic process

very-low-density lipoprotein particle

oxidation reduction

 
229110_at 0.919 3.472 3.667 2.243e-03 0.091 -1.342 LOC100128844 hypothetical protein LOC100128844 9   N50083 9p22.1 Hs.593150      
230563_at 0.756 4.497 3.666 2.247e-03 0.091 -1.343 RASGEF1A RasGEF domain family, member 1A 10 -43009989 BF446578 10q11.21 Hs.125293 4

guanyl-nucleotide exchange factor activity

intracellular

regulation of small GTPase mediated signal transduction

 
242887_at -0.441 4.686 -3.665 2.251e-03 0.091 -1.345 KCMF1 potassium channel modulatory factor 1 2 85051741 AI221300 2p11.2 Hs.654968 7

intracellular

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
225939_at -0.618 6.385 -3.665 2.252e-03 0.091 -1.345 EIF4E3 eukaryotic translation initiation factor 4E family member 3 3 -71811131, -71811131, -71811131, -71811131 AL161983 3p14 Hs.581355 3

RNA binding

translation initiation factor activity

cytoplasm

translational initiation

regulation of translation

 
200711_s_at -0.510 9.463 -3.664 2.253e-03 0.091 -1.346 SKP1 S-phase kinase-associated protein 1 5 -133519980 NM_003197 5q31 Hs.171626 Hs.710433 63

protein binding

nucleoplasm

cytosol

ubiquitin-dependent protein catabolic process

SCF ubiquitin ligase complex

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

Wnt signaling pathway

TGF-beta signaling pathway

205388_at -0.934 13.323 -3.662 2.264e-03 0.091 -1.350 TNNC2 troponin C type 2 (fast) 20 -43885261 NM_003279 20q12-q13.11 Hs.182421 12

skeletal muscle contraction

actin binding

calcium ion binding

troponin complex

regulation of muscle contraction

Calcium signaling pathway

202034_x_at -0.727 7.934 -3.661 2.268e-03 0.091 -1.352 RB1CC1 RB1-inducible coiled-coil 1 8 -53697570 NM_014781 8q11 Hs.196102 29

liver development

positive regulation of protein amino acid phosphorylation

protein binding

nucleus

cell cycle

JNK cascade

heart development

negative regulation of apoptosis

regulation of transcription

positive regulation of cell size

 
221743_at -0.332 10.502 -3.661 2.268e-03 0.091 -1.352 CUGBP1 CUG triplet repeat, RNA binding protein 1 11 -47446520, -47446520, -47446520 AI472139 11p11 Hs.632137 34

nucleotide binding

translation repressor activity, nucleic acid binding

mRNA binding

nucleus

cytoplasm

mRNA splice site selection

mRNA processing

germ cell development

embryonic development

RNA interference

ribonucleoprotein complex

BRE binding

 
239390_at -0.406 5.653 -3.659 2.278e-03 0.091 -1.356 GTDC1 glycosyltransferase-like domain containing 1 2 -144420052, -144420050 BE327650 2q22.3 Hs.44780 3

biosynthetic process

transferase activity, transferring glycosyl groups

 
236022_at 0.335 5.085 3.659 2.278e-03 0.091 -1.356 MYO19 myosin XIX 17 -31943030, -31925712, -31925711 AI650341 17q12 Hs.302051 3

nucleotide binding

motor activity

actin binding

ATP binding

cytoplasm

myosin complex

 
204161_s_at -0.780 7.008 -3.659 2.279e-03 0.091 -1.357 ENPP4 ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative function) 6 46205659 NM_014936 6p21.1 Hs.643497 4

metabolic process

membrane

integral to membrane

hydrolase activity

 
200794_x_at -0.633 9.386 -3.656 2.294e-03 0.092 -1.363 DAZAP2 DAZ associated protein 2 12 49918774, 49918774 NM_014764 12q12 Hs.369761 15

protein binding

WW domain binding

 
214033_at -0.470 5.924 -3.655 2.296e-03 0.092 -1.364 ABCC6 ATP-binding cassette, sub-family C (CFTR/MRP), member 6 16 -16222544, -16150922 AI084637 16p13.1 Hs.442182 70

nucleotide binding

transporter activity

ATP binding

plasma membrane

transport

visual perception

integral to membrane

ATPase activity

response to drug

ATPase activity, coupled to transmembrane movement of substances

response to stimulus

ABC transporters

201091_s_at -0.551 7.916 -3.655 2.297e-03 0.092 -1.364 CBX3 chromobox homolog 3 (HP1 gamma homolog, Drosophila) 7 26207623, 26207848 BE748755 7p15.2 Hs.381189 Hs.706294 45

condensed chromosome, centromeric region

chromatin

chromatin binding

nucleus

nuclear inner membrane

polytene chromosome chromocenter

nuclear euchromatin

spindle

chromatin assembly or disassembly

chromatin remodeling

negative regulation of transcription

general transcriptional repressor activity

enzyme binding

protein domain specific binding

nuclear centromeric heterochromatin

 
222380_s_at 0.428 6.494 3.655 2.298e-03 0.092 -1.365 PDCD6 programmed cell death 6 5 324735 AI907083 5p15.33 Hs.50823 36

calcium ion binding

nucleus

endoplasmic reticulum

apoptosis

induction of apoptosis by extracellular signals

membrane

calcium-dependent protein binding

response to calcium ion

 
224700_at -0.728 9.174 -3.655 2.299e-03 0.092 -1.365 STT3B STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) 3 31549494 BF221532 3p23 Hs.475812 9

dolichyl-diphosphooligosaccharide-protein glycotransferase activity

protein binding

endoplasmic reticulum

protein amino acid glycosylation

membrane

integral to membrane

transferase activity

N-Glycan biosynthesis

Metabolic pathways

220233_at 0.396 5.404 3.654 2.304e-03 0.092 -1.367 FBXO17 F-box protein 17 19 -44123881, -44123881 NM_024907 19q13.2 Hs.531770 7

protein binding

modification-dependent protein catabolic process

protein catabolic process

 
228420_at -0.260 5.780 -3.654 2.305e-03 0.092 -1.367 PDCD2 programmed cell death 2 6 -170732759, -170728374 AW590850 6q27 Hs.367900 14

DNA binding

protein binding

nucleus

cytoplasm

apoptosis

zinc ion binding

metal ion binding

 
1555912_at 0.361 4.156 3.653 2.309e-03 0.092 -1.369 ST7OT1 ST7 overlapping transcript 1 (non-protein coding) 7 -116379736 AI016213 7q31.1-q31.2 Hs.597516 1    
238263_at 0.315 4.063 3.653 2.310e-03 0.092 -1.369 LOC285965 hypothetical protein LOC285965 7   AW590543 7q35 Hs.642649      
207705_s_at 0.712 6.329 3.649 2.328e-03 0.092 -1.377 NINL ninein-like 20 -25381337 NM_025176 20p11.22-p11.1 Hs.696157 13

calcium ion binding

cytoplasm

centrosome

microtubule

 
212967_x_at -0.443 9.824 -3.649 2.329e-03 0.092 -1.377 NAP1L1 nucleosome assembly protein 1-like 1 12 -74724938 AW148801 12q21.2 Hs.524599 Hs.695185 17

protein binding

nucleus

chromatin assembly complex

DNA replication

nucleosome assembly

positive regulation of cell proliferation

melanosome

 
230068_s_at 0.310 3.912 3.648 2.331e-03 0.092 -1.378 PEG3 paternally expressed 3 19 -62013256, -62013256 W93046 19q13.4 Hs.719209 18

nucleic acid binding

transcription factor activity

intracellular

nucleus

cytoplasm

regulation of transcription, DNA-dependent

apoptosis

zinc ion binding

metal ion binding

 
226047_at 0.410 7.129 3.647 2.336e-03 0.093 -1.379 MRVI1 murine retrovirus integration site 1 homolog 11 -10551213, -10551213, -10551213 N66571 11p15 Hs.501898 13

cytoplasm

endoplasmic reticulum membrane

membrane

integral to membrane

sarcoplasmic reticulum

perinuclear region of cytoplasm

Vascular smooth muscle contraction

236994_at -1.119 4.327 -3.647 2.337e-03 0.093 -1.380 FBXL4 F-box and leucine-rich repeat protein 4 6 -99428321 AW770868 6q16.1-q16.3 Hs.536850 6

ubiquitin ligase complex

nucleus

cytoplasm

ubiquitin-dependent protein catabolic process

 
210379_s_at -0.381 3.849 -3.646 2.339e-03 0.093 -1.381 TLK1 tousled-like kinase 1 2 -171555578, -171555578, -171555578 AF162666 2q31.1 Hs.719163 23

nucleotide binding

regulation of chromatin assembly or disassembly

protein serine/threonine kinase activity

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

nucleus

protein amino acid phosphorylation

intracellular protein transport

response to DNA damage stimulus

cell cycle

intracellular signaling cascade

chromatin modification

transferase activity

 
1569906_s_at -0.387 6.371 -3.645 2.344e-03 0.093 -1.383 PHF20 PHD finger protein 20 20 33823336 BC015538 20q11.22-q11.23 Hs.517044 11

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
225885_at -0.641 8.605 -3.645 2.344e-03 0.093 -1.383 EEA1 early endosome antigen 1 12 -91690415 AI336848 12q22 Hs.567367 32

calmodulin binding

phosphatidylinositol binding

intracellular

membrane fraction

cytoplasm

early endosome

cytosol

serine-pyruvate aminotransferase complex

vesicle fusion

zinc ion binding

membrane

synaptic vesicle to endosome fusion

extrinsic to plasma membrane

GTP-dependent protein binding

protein homodimerization activity

early endosome to late endosome transport

metal ion binding

Endocytosis

225662_at -0.449 11.537 -3.644 2.349e-03 0.093 -1.385 ZAK sterile alpha motif and leucine zipper containing kinase AZK 2 173648810, 173648810 H28667 2q24.2 Hs.444451 24

cell cycle checkpoint

DNA damage checkpoint

nucleotide binding

activation of MAPKK activity

magnesium ion binding

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

protein tyrosine kinase activity

ATP binding

nucleus

cytoplasm

response to stress

cell cycle

cell cycle arrest

protein kinase cascade

activation of JUN kinase activity

cell death

cell proliferation

response to radiation

transferase activity

cell differentiation

identical protein binding

positive regulation of apoptosis

MAPK signaling pathway

Tight junction

218237_s_at 2.306 7.326 3.643 2.356e-03 0.093 -1.388 SLC38A1 solute carrier family 38, member 1 12 -44863107 NM_030674 12q13.11 Hs.694701 11

sodium:amino acid symporter activity

membrane fraction

plasma membrane

ion transport

sodium ion transport

glutamine transport

L-glutamine transmembrane transporter activity

symporter activity

integral to membrane

axon

sodium ion binding

 
1569566_at -0.957 4.803 -3.643 2.357e-03 0.093 -1.388 TBC1D1 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 4 37569114 BC028196 4p14 Hs.176503 15

GTPase activator activity

Rab GTPase activator activity

intracellular

nucleus

regulation of Rab GTPase activity

 
200912_s_at -0.351 12.291 -3.642 2.361e-03 0.093 -1.389 EIF4A2 eukaryotic translation initiation factor 4A, isoform 2 3 187984054 NM_001967 3q28 Hs.518475 Hs.599481 15

nucleotide binding

RNA binding

translation initiation factor activity

helicase activity

protein binding

ATP binding

cytosol

translation

regulation of translational initiation

ATP-dependent helicase activity

eukaryotic translation initiation factor 4F complex

hydrolase activity

interspecies interaction between organisms

 
232488_at 0.518 6.953 3.642 2.362e-03 0.093 -1.390 AGXT2L2 alanine-glyoxylate aminotransferase 2-like 2 5 -177568146 AK023470 5q35.3 Hs.248746 4

mitochondrion

transaminase activity

transferase activity

pyridoxal phosphate binding

 
210210_at 0.289 6.120 3.641 2.366e-03 0.093 -1.391 MPZL1 myelin protein zero-like 1 1 165957810 AF181660 1q24.2 Hs.493919 Hs.603116 19

structural molecule activity

protein binding

integral to plasma membrane

transmembrane receptor protein tyrosine kinase signaling pathway

cell-cell signaling

membrane

Cell adhesion molecules (CAMs)

210283_x_at -0.520 9.023 -3.641 2.367e-03 0.093 -1.392 PAIP1 poly(A) binding protein interacting protein 1 5 -43562126, -43562126 BC005295 5p12 Hs.482038 12

RNA binding

protein binding

cytoplasm

translational initiation

regulation of translation

translation activator activity

RNA metabolic process

mRNA stabilization

 
203421_at 0.364 6.662 3.640 2.369e-03 0.093 -1.393 TP53I11 tumor protein p53 inducible protein 11 11 -44910474 NM_006034 11p11.2 Hs.554791 10

response to stress

negative regulation of cell proliferation

 
204720_s_at 0.967 3.220 3.640 2.371e-03 0.093 -1.393 DNAJC6 DnaJ (Hsp40) homolog, subfamily C, member 6 1 65503017 AV729634 1pter-q31.3 Hs.647643 11

protein tyrosine phosphatase activity

hydrolase activity

SH3 domain binding

heat shock protein binding

Endocytosis

217833_at -0.650 8.199 -3.640 2.371e-03 0.093 -1.394 SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 6 -86380411, -86380411, -86374221, -86374221, -86374221, -86374221 AL520908 6q14-q15 Hs.571177 33

nucleotide binding

RNA binding

protein binding

nucleus

nucleoplasm

spliceosomal complex

cytoplasm

endoplasmic reticulum

microsome

mRNA processing

poly(A) RNA binding

RNA splicing

interspecies interaction between organisms

 
225332_at -0.527 9.043 -3.639 2.375e-03 0.093 -1.395 LOC729082 hypothetical protein LOC729082 15 39363492 BF674064 15q15.1 Hs.380164 2    
202537_s_at -0.359 7.534 -3.638 2.379e-03 0.093 -1.396 CHMP2B chromatin modifying protein 2B 3 87359102 AF151842 3p11.2 Hs.476930 36

intracellular

cytoplasm

endosome

cytosol

protein transport

membrane

protein domain specific binding

Endocytosis

202334_s_at -0.722 10.002 -3.637 2.383e-03 0.093 -1.398 UBE2B ubiquitin-conjugating enzyme E2B (RAD6 homolog) 5 133734768 AI768723 5q23-q31 Hs.615284 Hs.644421 23

nucleotide binding

protein polyubiquitination

chromatin

ubiquitin-protein ligase activity

ubiquitin-protein ligase activity

protein binding

ATP binding

nucleus

replication fork

cytoplasm

plasma membrane

postreplication repair

postreplication repair

ubiquitin-dependent protein catabolic process

ubiquitin-dependent protein catabolic process

protein monoubiquitination

response to DNA damage stimulus

spermatogenesis

sperm axoneme assembly

response to UV

ligase activity

ubiquitin protein ligase binding

histone H2A ubiquitination

response to drug

protein stabilization

regulation of protein metabolic process

protein autoubiquitination

Wnt receptor signaling pathway through beta-catenin

Ubiquitin mediated proteolysis

203310_at -0.704 7.350 -3.637 2.384e-03 0.093 -1.398 STXBP3 syntaxin binding protein 3 1 109090807 NM_007269 1p13.3 Hs.530436 14

molecular_function

cellular_component

cytoplasm

cytosol

cytosol

plasma membrane

vesicle docking during exocytosis

biological_process

protein transport

vesicle-mediated transport

 
210115_at 0.528 4.086 3.637 2.386e-03 0.093 -1.399 RPL39L ribosomal protein L39-like 3 -188321434 L05096 3q27 Hs.647900 4

structural constituent of ribosome

intracellular

ribosome

translation

spermatogenesis

cytosolic large ribosomal subunit

 
218264_at -0.319 7.406 -3.637 2.387e-03 0.093 -1.399 BCCIP BRCA2 and CDKN1A interacting protein 10 127502093, 127502093, 127502093 NM_016567 10q26.1 Hs.370292 Hs.715543 31

regulation of cyclin-dependent protein kinase activity

protein binding

nucleus

DNA repair

response to DNA damage stimulus

cell cycle

 
223904_at -0.975 6.778 -3.634 2.400e-03 0.093 -1.405 PRKAG3 protein kinase, AMP-activated, gamma 3 non-catalytic subunit 2 -219395349 AF214519 2q35 Hs.591634 13

AMP-activated protein kinase activity

glycogen biosynthetic process

fatty acid biosynthetic process

protein kinase cascade

glucose transport

protein kinase binding

Insulin signaling pathway

Adipocytokine signaling pathway

Hypertrophic cardiomyopathy (HCM)

215676_at 0.341 5.614 3.633 2.406e-03 0.093 -1.407 BRF1 BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae) 14 -104746669, -104746667 N91109 14q Hs.424484 27

transcription factor TFIIIB complex

transcription factor activity

RNA polymerase III transcription factor activity

translation initiation factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

transcription initiation from RNA polymerase III promoter

translational initiation

zinc ion binding

rRNA transcription

tRNA transcription

transcription activator activity

positive regulation of transcription

metal ion binding

 
205087_at -0.626 7.033 -3.633 2.407e-03 0.093 -1.407 RWDD3 RWD domain containing 3 1 95472298 NM_015485 1p21.3 Hs.709591 11

protein binding

nucleus

cytoplasm

 
222580_at -0.589 7.613 -3.631 2.413e-03 0.094 -1.410 ZNF644 zinc finger protein 644 1 -91153444, -91153444 AK023596 1p22.2 Hs.173001 7

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
213251_at -0.476 7.781 -3.631 2.415e-03 0.094 -1.411 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 4 144654065 AV712064 4q31.1-q31.2 Hs.558422 Hs.710623 37

nucleotide binding

condensed chromosome

DNA binding

RNA polymerase II transcription factor activity

helicase activity

ATP binding

nucleus

nucleoplasm

nucleolus

chromatin assembly or disassembly

nucleosome assembly

transcription initiation

regulation of transcription from RNA polymerase II promoter

embryonic development

transcription activator activity

nucleosome positioning

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

ATPase activity

RSF complex

nucleosome binding

histone binding

ATP-dependent chromatin remodeling

 
214640_at -0.308 2.713 -3.629 2.424e-03 0.094 -1.414 UNC93A unc-93 homolog A (C. elegans) 6 167624792 AL021331 6q27 Hs.567508 4

molecular_function

plasma membrane

biological_process

integral to membrane

 
230331_at -0.811 4.051 -3.629 2.425e-03 0.094 -1.414 C13orf39 chromosome 13 open reading frame 39 13 -102136097 AI333373 13q33.1 Hs.508623 1    
202447_at 0.576 10.373 3.628 2.429e-03 0.094 -1.416 DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 8 91082755 NM_001359 8q21.3 Hs.492212 22

binding

mitochondrion

fatty acid beta-oxidation

fatty acid beta-oxidation

2,4-dienoyl-CoA reductase (NADPH) activity

2,4-dienoyl-CoA reductase (NADPH) activity

oxidoreductase activity

protein homotetramerization

oxidation reduction

NADPH binding

 
206492_at 0.708 5.547 3.628 2.431e-03 0.094 -1.417 FHIT fragile histidine triad gene 3 -59710075 NM_002012 3p14.2 Hs.715588 Hs.715597 164

magnesium ion binding

protein binding

cytoplasm

DNA replication

nucleotide metabolic process

hydrolase activity

manganese ion binding

bis(5'-adenosyl)-triphosphatase activity

Purine metabolism

Small cell lung cancer

Non-small cell lung cancer

208884_s_at -0.526 7.241 -3.627 2.433e-03 0.094 -1.417 UBR5 ubiquitin protein ligase E3 component n-recognin 5 8 -103334744 AF006010 8q22 Hs.591856 21

RNA binding

ubiquitin-protein ligase activity

protein binding

intracellular

soluble fraction

nucleus

protein modification process

ubiquitin-dependent protein catabolic process

response to DNA damage stimulus

zinc ion binding

cell proliferation

ligase activity

acid-amino acid ligase activity

metal ion binding

progesterone receptor signaling pathway

Ubiquitin mediated proteolysis

209236_at 0.340 5.495 3.626 2.437e-03 0.094 -1.419 SLC23A2 solute carrier family 23 (nucleobase transporters), member 2 20 -4781001, -4781001 AL389886 20p13 Hs.516866 34

transporter activity

membrane fraction

integral to plasma membrane

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

ion transport

sodium ion transport

sodium-dependent multivitamin transmembrane transporter activity

nucleobase transmembrane transporter activity

symporter activity

nucleobase transport

molecular hydrogen transport

membrane

L-ascorbic acid metabolic process

sodium ion binding

 
229820_at 0.564 5.322 3.626 2.438e-03 0.094 -1.419 LOC440993 hypothetical LOC440993 3   BF509179 3q29 Hs.709411      
209696_at 0.363 4.851 3.626 2.438e-03 0.094 -1.419 FBP1 fructose-1,6-bisphosphatase 1 9 -96405237, -96405237 D26054 9q22.3 Hs.494496 31

magnesium ion binding

fructose-2,6-bisphosphate 2-phosphatase activity

cytosol

carbohydrate metabolic process

fructose metabolic process

gluconeogenesis

hydrolase activity

fructose 1,6-bisphosphate 1-phosphatase activity

fructose 1,6-bisphosphate 1-phosphatase activity

phosphoric ester hydrolase activity

identical protein binding

Glycolysis / Gluconeogenesis

Pentose phosphate pathway

Fructose and mannose metabolism

Carbon fixation in photosynthetic organisms

Biosynthesis of phenylpropanoids

Metabolic pathways

Insulin signaling pathway

1558388_a_at 0.612 2.892 3.626 2.438e-03 0.094 -1.419 LOC643763 hypothetical LOC643763 8 64052973 R41806 8q12.3 Hs.491856 2    
226617_at -0.670 8.348 -3.626 2.439e-03 0.094 -1.420 ARL5A ADP-ribosylation factor-like 5A 2 -152365725 AW291264 2q23.3 Hs.470233 6

nucleotide binding

GTP binding

intracellular

small GTPase mediated signal transduction

 
208615_s_at -0.645 9.549 -3.625 2.444e-03 0.094 -1.421 PTP4A2 protein tyrosine phosphatase type IVA, member 2 1 -32146379 BF795101 1p35 Hs.470477 Hs.712749 Hs.713025 21

prenylated protein tyrosine phosphatase activity

protein binding

cytoplasm

early endosome

plasma membrane

protein amino acid dephosphorylation

hydrolase activity

 
206580_s_at 0.444 6.882 3.623 2.454e-03 0.094 -1.425 EFEMP2 EGF-containing fibulin-like extracellular matrix protein 2 11 -65390487 NM_016938 11q13.1 Hs.170622 15

transmembrane receptor activity

extracellular matrix structural constituent

calcium ion binding

protein binding

extracellular region

basement membrane

blood coagulation

membrane

 
225805_at -0.598 5.331 -3.623 2.455e-03 0.094 -1.426 HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 1 -243080224 AW137669 1q44 Hs.106212 47

nucleotide binding

nuclear mRNA splicing, via spliceosome

DNA binding

RNA binding

protein binding

ATP binding

nucleus

spliceosomal complex

RNA splicing

cell surface

heterogeneous nuclear ribonucleoprotein complex

 
208894_at 1.143 8.453 3.623 2.456e-03 0.094 -1.426 HLA-DRA major histocompatibility complex, class II, DR alpha 6 32515624, 3814608, 3622461 M60334 6p21.3 Hs.520048 134

antigen processing and presentation of peptide or polysaccharide antigen via MHC class II

lysosome

plasma membrane

plasma membrane

integral to plasma membrane

immune response

MHC class II receptor activity

MHC class II protein complex

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Hematopoietic cell lineage

Type I diabetes mellitus

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

210658_s_at -0.397 5.965 -3.622 2.459e-03 0.094 -1.427 GGA2 golgi associated, gamma adaptin ear containing, ARF binding protein 2 16 -23383143 BC000284 16p12 Hs.460336 37

protein binding

intracellular

endosome

trans-Golgi network

intracellular protein transport

membrane

vesicle-mediated transport

membrane coat

clathrin adaptor complex

ADP-ribosylation factor binding

Lysosome

201604_s_at -0.455 6.274 -3.622 2.462e-03 0.094 -1.428 PPP1R12A protein phosphatase 1, regulatory (inhibitor) subunit 12A 12 -78691474, -78691474, -78691474 NM_002480 12q15-q21 Hs.49582 41

signal transducer activity

protein binding

cytoplasm

Vascular smooth muscle contraction

Focal adhesion

Long-term potentiation

Regulation of actin cytoskeleton

211725_s_at 1.042 4.851 3.621 2.464e-03 0.094 -1.429 BID BH3 interacting domain death agonist 22 -16596905, -16596905 BC005884 22q11.1 Hs.591054 111

release of cytochrome c from mitochondria

death receptor binding

protein binding

membrane fraction

cytoplasm

mitochondrion

mitochondrial outer membrane

cytosol

cytosol

induction of apoptosis via death domain receptors

activation of pro-apoptotic gene products

membrane

regulation of mitochondrial membrane permeability

neuron apoptosis

p53 signaling pathway

Apoptosis

Natural killer cell mediated cytotoxicity

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

Pathways in cancer

231930_at -0.756 4.562 -3.621 2.467e-03 0.094 -1.430 ELMOD1 ELMO/CED-12 domain containing 1 11 106967026 AL359601 11q22.3 Hs.495779 5

cytoskeleton

phagocytosis

 
230821_at -0.445 5.839 -3.621 2.467e-03 0.094 -1.430 ZNF148 zinc finger protein 148 3 -126427202 AW594167 3q21 Hs.592591 34

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

specific RNA polymerase II transcription factor activity

intracellular

nucleus

DNA-directed RNA polymerase II, core complex

nucleolus

Golgi apparatus

cellular defense response

gamete generation

zinc ion binding

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

 
210386_s_at 0.304 6.834 3.620 2.471e-03 0.094 -1.432 MTX1 metaxin 1 1 153445113, 153445113 BC001906 1q21 Hs.490874 13

protein binding

mitochondrion

mitochondrial outer membrane

mitochondrial inner membrane

protein targeting to mitochondrion

protein transport

membrane

integral to membrane

 
209047_at 0.546 8.788 3.619 2.475e-03 0.094 -1.433 AQP1 aquaporin 1 (Colton blood group) 7 30917992 AL518391 7p14 Hs.76152 100

transporter activity

protein binding

integral to plasma membrane

transport

water transport

excretion

water channel activity

carbon dioxide transport

ammonium transport

membrane

basolateral plasma membrane

apical plasma membrane

ammonia transporter activity

 
240770_at 0.781 2.734 3.618 2.479e-03 0.094 -1.435 TMEM171 transmembrane protein 171 5 72452143 AW058459 5q13.2 Hs.162246 5

membrane

integral to membrane

 
1553357_at -0.597 3.153 -3.617 2.487e-03 0.094 -1.438 LOC158696 hypothetical LOC158696 X -137524557 NM_153016 Xq26.3 Hs.558664 3    
204279_at 0.567 6.795 3.616 2.490e-03 0.094 -1.439 PSMB9 proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2) 6 32929915, 4202792, 4007991 NM_002800 6p21.3 Hs.654585 72

threonine-type endopeptidase activity

nucleus

cytoplasm

cytosol

proteasome core complex

immune response

peptidase activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

proteolysis involved in cellular protein catabolic process

Proteasome

225801_at -1.355 5.913 -3.616 2.490e-03 0.094 -1.439 FBXO32 F-box protein 32 8 -124584538, -124584538 AW518714 8q24.13 Hs.403933 17

protein binding

modification-dependent protein catabolic process

 
239839_at 0.447 4.127 3.616 2.493e-03 0.094 -1.440 ZNF555 zinc finger protein 555 19 2792481 BF435923 19p13.3 Hs.47712 7

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
212760_at -0.506 8.644 -3.613 2.504e-03 0.095 -1.444 UBR2 ubiquitin protein ligase E3 component n-recognin 2 6 42640035 AB002347 6p21.1 Hs.529925 9

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

nucleus

ubiquitin-dependent protein catabolic process

male meiosis I

spermatogenesis

zinc ion binding

ligase activity

protein catabolic process

metal ion binding

 
202566_s_at -0.706 9.802 -3.613 2.506e-03 0.095 -1.445 SVIL supervillin 10 -29786282, -29786282 AF051851 10p11.2 Hs.499209 23

podosome

calcium ion binding

nucleus

cytoplasm

plasma membrane

cytoskeleton organization

skeletal muscle tissue development

cell projection

costamere

actin filament binding

 
214334_x_at -0.392 9.875 -3.611 2.516e-03 0.095 -1.448 DAZAP2 DAZ associated protein 2 12 49918774, 49918774 N34846 12q12 Hs.369761 15

protein binding

WW domain binding

 
204683_at 0.435 6.987 3.609 2.528e-03 0.095 -1.453 ICAM2 intercellular adhesion molecule 2 17 -59433686, -59433686 NM_000873 17q23-q25 Hs.431460 45

uropod

integrin binding

protein binding

plasma membrane

plasma membrane

integral to plasma membrane

cell-cell adhesion

Cell adhesion molecules (CAMs)

Natural killer cell mediated cytotoxicity

227767_at -0.464 5.679 -3.608 2.531e-03 0.095 -1.454 CSNK1G3 casein kinase 1, gamma 3 5 122875691 AI073822 5q23 Hs.129206 6

nucleotide binding

protein serine/threonine kinase activity

ATP binding

cytoplasm

protein modification process

protein amino acid phosphorylation

signal transduction

Wnt receptor signaling pathway

transferase activity

Hedgehog signaling pathway

217868_s_at -0.307 8.863 -3.607 2.536e-03 0.095 -1.456 METTL9 methyltransferase like 9 16 21518356 NM_016025 16p13-p12 Hs.279583 6    
209422_at -0.741 7.978 -3.607 2.537e-03 0.095 -1.456 PHF20 PHD finger protein 20 20 33823336 AL109965 20q11.22-q11.23 Hs.517044 11

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
213891_s_at 0.419 8.860 3.607 2.537e-03 0.095 -1.456 TCF4 transcription factor 4 18 -51040559 AI927067 18q21.1 Hs.605153 55

transcription factor activity

protein binding

nucleus

regulation of transcription

positive regulation of transcription, DNA-dependent

protein heterodimerization activity

 
228185_at -0.520 7.338 -3.607 2.538e-03 0.095 -1.457 ZNF25 zinc finger protein 25 10 -38278800 N32599 10p11.1 Hs.499429 8

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
212468_at -0.613 6.974 -3.605 2.548e-03 0.095 -1.460 SPAG9 sperm associated antigen 9 17 -46394534 AK023512 17q21.33 Hs.463439 22

acrosomal vesicle

protein binding

cytoplasm

spermatogenesis

integral to membrane

positive regulation of cell migration

perinuclear region of cytoplasm

 
201501_s_at -0.513 8.926 -3.605 2.550e-03 0.095 -1.461 GRSF1 G-rich RNA sequence binding factor 1 4 -71900362, -71900362 NM_002092 4q13 Hs.309763 6

mRNA binding

cytoplasm

mRNA polyadenylation

 
200731_s_at -0.653 9.773 -3.604 2.551e-03 0.095 -1.461 PTP4A1 protein tyrosine phosphatase type IVA, member 1 6 64339878 AW165960 6q12 Hs.227777 Hs.706850 28

protein tyrosine phosphatase activity

cytoplasm

early endosome

endoplasmic reticulum

spindle

plasma membrane

protein amino acid dephosphorylation

cell cycle

multicellular organismal development

hydrolase activity

 
225329_at 0.294 6.748 3.604 2.553e-03 0.095 -1.462 LOC348262 hypothetical protein LOC348262 17 -2338651 BF338291 17q25.3 Hs.514632 1    
217593_at 0.396 6.065 3.604 2.554e-03 0.095 -1.462 ZSCAN18 zinc finger and SCAN domain containing 18 19 -63310783, -63287021, -63287021 AI375002 19q13.43 Hs.235390 5

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
212435_at -0.384 7.497 -3.603 2.560e-03 0.095 -1.465 TRIM33 tripartite motif-containing 33 1 -114736921 AA205593 1p13.1 Hs.26837 12

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

negative regulation of transcription

protein ubiquitination

ligase activity

regulation of transforming growth factor beta receptor signaling pathway

modification-dependent protein catabolic process

negative regulation of BMP signaling pathway

metal ion binding

co-SMAD binding

R-SMAD binding

 
1555812_a_at 0.551 6.031 3.602 2.562e-03 0.095 -1.465 ARHGDIB Rho GDP dissociation inhibitor (GDI) beta 12 -14986216 AF498927 12p12.3 Hs.504877 34

Rho GDP-dissociation inhibitor activity

GTPase activator activity

protein binding

cytoplasm

cytoskeleton

cell motion

immune response

negative regulation of cell adhesion

Rho protein signal transduction

multicellular organismal development

cytoplasmic membrane-bounded vesicle

actin cytoskeleton organization

Neurotrophin signaling pathway

200710_at 0.518 11.429 3.600 2.577e-03 0.096 -1.471 ACADVL acyl-Coenzyme A dehydrogenase, very long chain 17 7063876 NM_000018 17p13-p11 Hs.437178 Hs.463928 30

long-chain-acyl-CoA dehydrogenase activity

mitochondrion

mitochondrial inner membrane

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

electron carrier activity

energy derivation by oxidation of organic compounds

membrane

mitochondrial nucleoid

FAD binding

oxidation reduction

Fatty acid metabolism

Metabolic pathways

227584_at 0.365 6.289 3.599 2.578e-03 0.096 -1.471 NAV1 neuron navigator 1 1 199884072 BF339566 1q32.3 Hs.585374 10

nucleotide binding

cytoplasm

cytoskeleton

microtubule

multicellular organismal development

nervous system development

nucleoside-triphosphatase activity

cell differentiation

 
1557720_s_at 1.077 4.018 3.598 2.586e-03 0.096 -1.474 MYO16 myosin XVI 13 108046500 BC041343 13q33.3 Hs.656587 7

nucleotide binding

motor activity

ATP binding

nucleoplasm

cytoplasm

plasma membrane

negative regulation of cell proliferation

myosin complex

cerebellum development

negative regulation of S phase of mitotic cell cycle

perinuclear region of cytoplasm

actin filament binding

 
203192_at -0.484 6.466 -3.597 2.591e-03 0.096 -1.476 ABCB6 ATP-binding cassette, sub-family B (MDR/TAP), member 6 2 -219782737 NM_005689 2q36 Hs.107911 15

nucleotide binding

ATP binding

mitochondrion

mitochondrial envelope

mitochondrial outer membrane

transport

cellular iron ion homeostasis

membrane

integral to membrane

ATPase activity

ATPase activity, coupled to transmembrane movement of substances

ATP-binding cassette (ABC) transporter complex

ABC transporters

1553993_s_at -0.713 7.766 -3.596 2.593e-03 0.096 -1.477 MED25 mediator complex subunit 25 19 55013357 BC024312 19q13.3 Hs.656639 13

nucleus

regulation of transcription

 
205091_x_at -0.558 5.452 -3.596 2.593e-03 0.096 -1.477 RECQL RecQ protein-like (DNA helicase Q1-like) 12 -21513111 NM_002907 12p12 Hs.235069 29

nucleotide binding

DNA strand renaturation

DNA strand annealing activity

DNA binding

ATP-dependent DNA helicase activity

protein binding

ATP binding

nucleus

DNA repair

DNA recombination

hydrolase activity

 
214121_x_at -0.660 9.173 -3.596 2.597e-03 0.096 -1.478 PDLIM7 PDZ and LIM domain 7 (enigma) 5 -176849852, -176843000 AA086229 5q35.3 Hs.533040 22

ossification

protein binding

cytoplasm

cytoskeleton

receptor-mediated endocytosis

multicellular organismal development

zinc ion binding

cell differentiation

metal ion binding

 
202546_at 0.697 6.278 3.595 2.599e-03 0.096 -1.478 VAMP8 vesicle-associated membrane protein 8 (endobrevin) 2 85658158 NM_003761 2p12-p11.2 Hs.714302 27

protein binding

membrane fraction

early endosome

membrane

integral to membrane

vesicle-mediated transport

SNARE interactions in vesicular transport

228153_at -0.534 9.778 -3.595 2.602e-03 0.096 -1.480 RNF144B ring finger protein 144B 6 18495572 AI953847 6p22.3 Hs.148741 6

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

apoptosis

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

protein ubiquitination during ubiquitin-dependent protein catabolic process

metal ion binding

 
228624_at 0.363 4.156 3.594 2.604e-03 0.096 -1.480 TMEM144 transmembrane protein 144 4 159350850 AI432488 4q32.1 Hs.718582 2

membrane

integral to membrane

 
214468_at 1.361 8.940 3.594 2.606e-03 0.096 -1.481 MYH6 myosin, heavy chain 6, cardiac muscle, alpha 14 -22921038 D00943 14q12 Hs.278432 23

microfilament motor activity

nucleotide binding

in utero embryonic development

regulation of the force of heart contraction

regulation of heart rate

actin binding

calmodulin binding

ATP binding

nucleus

nucleolus

cytoplasm

striated muscle thick filament

focal adhesion

striated muscle contraction

adult heart development

visceral muscle development

regulation of blood pressure

structural constituent of muscle

myosin complex

ATPase activity

actin filament-based movement

muscle filament sliding

actin-dependent ATPase activity

regulation of ATPase activity

sarcomere organization

cardiac muscle fiber development

atrial cardiac muscle morphogenesis

ventricular cardiac muscle morphogenesis

Cardiac muscle contraction

Tight junction

Hypertrophic cardiomyopathy (HCM)

1565329_at 0.527 2.450 3.594 2.608e-03 0.096 -1.482 POLE4 polymerase (DNA-directed), epsilon 4 (p12 subunit) 2 75039282 AY034104 2p12 Hs.469060 5

DNA-directed DNA polymerase activity

protein binding

intracellular

nucleus

transferase activity

nucleotidyltransferase activity

sequence-specific DNA binding

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

DNA replication

Base excision repair

Nucleotide excision repair

224690_at 0.787 9.832 3.593 2.613e-03 0.096 -1.484 C20orf108 chromosome 20 open reading frame 108 20 54367389 BG432350 20q13.2 Hs.143736 Hs.593629 6

membrane

integral to membrane

 
200737_at -0.803 8.965 -3.592 2.619e-03 0.096 -1.486 PGK1 phosphoglycerate kinase 1 X 77246321 NM_000291 Xq13 Hs.78771 52

nucleotide binding

phosphoglycerate kinase activity

ATP binding

cytoplasm

glycolysis

phosphorylation

transferase activity

Glycolysis / Gluconeogenesis

Carbon fixation in photosynthetic organisms

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

201133_s_at -0.536 8.032 -3.591 2.620e-03 0.096 -1.486 PJA2 praja ring finger 2 5 -108698308 AA142966 5q21.3 Hs.483036 Hs.592564 10

protein binding

cytoplasm

endoplasmic reticulum

Golgi apparatus

plasma membrane

zinc ion binding

postsynaptic density

ligase activity

modification-dependent protein catabolic process

cell junction

synapse

postsynaptic membrane

metal ion binding

 
205047_s_at 2.648 6.156 3.591 2.622e-03 0.096 -1.487 ASNS asparagine synthetase 7 -97319376, -97319376 NM_001673 7q21.3 Hs.489207 36

nucleotide binding

asparagine synthase (glutamine-hydrolyzing) activity

asparagine synthase (glutamine-hydrolyzing) activity

ATP binding

soluble fraction

cytosol

asparagine biosynthetic process

glutamine metabolic process

metabolic process

cellular amino acid biosynthetic process

ligase activity

cellular response to glucose starvation

negative regulation of apoptosis

positive regulation of mitotic cell cycle

Alanine, aspartate and glutamate metabolism

Nitrogen metabolism

Metabolic pathways

208729_x_at 0.560 9.421 3.590 2.627e-03 0.097 -1.489 HLA-B major histocompatibility complex, class I, B 6 -31429627, -2770844, -2569111 D83043 6p21.3 Hs.707171 Hs.77961 1101

antigen processing and presentation of peptide antigen via MHC class I

protein binding

membrane fraction

plasma membrane

integral to plasma membrane

defense response

immune response

immune response

membrane

integral to membrane

antigen processing and presentation

MHC class I receptor activity

MHC class I protein complex

interspecies interaction between organisms

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

202902_s_at 0.454 5.824 3.589 2.633e-03 0.097 -1.491 CTSS cathepsin S 1 -148969175 NM_004079 1q21 Hs.181301 62

cysteine-type endopeptidase activity

extracellular region

lysosome

proteolysis

immune response

peptidase activity

membrane

intracellular membrane-bounded organelle

Lysosome

Antigen processing and presentation

201360_at 0.647 8.529 3.588 2.638e-03 0.097 -1.492 CST3 cystatin C 20 -23562293 NM_000099 20p11.21 Hs.304682 151

beta-amyloid binding

protease binding

cysteine-type endopeptidase inhibitor activity

extracellular region

extracellular space

defense response

negative regulation of peptidase activity

negative regulation of histolysis

negative regulation of collagen catabolic process

negative regulation of extracellular matrix disassembly

peptidase inhibitor activity

regulation of tissue remodeling

fibril organization

negative regulation of elastin catabolic process

negative regulation of blood vessel remodeling

 
219643_at -2.114 5.193 -3.586 2.649e-03 0.097 -1.496 LRP1B low density lipoprotein-related protein 1B (deleted in tumors) 2 -140705465 NM_018557 2q21.2 Hs.656461 14

receptor activity

low-density lipoprotein receptor activity

calcium ion binding

protein binding

membrane fraction

receptor-mediated endocytosis

protein transport

membrane

integral to membrane

 
229253_at -0.425 6.881 -3.586 2.652e-03 0.097 -1.497 THEM4 thioesterase superfamily member 4 1 -150112683 AI184512 1q21 Hs.164070 8

cytoplasm

plasma membrane

ruffle membrane

cell projection

 
219418_at -0.391 6.396 -3.585 2.652e-03 0.097 -1.498 NHEJ1 nonhomologous end-joining factor 1 2 -219648289 NM_024782 2q35 Hs.225988 27

DNA binding

nucleus

DNA repair

double-strand break repair via nonhomologous end joining

response to DNA damage stimulus

central nervous system development

response to ionizing radiation

B cell differentiation

T cell differentiation

identical protein binding

positive regulation of ligase activity

Non-homologous end-joining

241710_at 0.532 3.914 3.585 2.655e-03 0.097 -1.498 hCG_1645220 hCG1645220 2 -43755795 AI436290 2p21 Hs.602756 1    
227268_at -0.892 6.024 -3.584 2.662e-03 0.097 -1.501 RNFT1 ring finger protein, transmembrane 1 17 -55384504 N51514 17q23.1 Hs.531701 1

protein binding

zinc ion binding

membrane

integral to membrane

metal ion binding

 
231948_s_at -0.427 7.718 -3.583 2.664e-03 0.097 -1.501 UBE2F ubiquitin-conjugating enzyme E2F (putative) 2 238540438 BG171548 2q37.3 Hs.471785 4

nucleotide binding

protein binding

ATP binding

ligase activity

NEDD8 ligase activity

modification-dependent protein catabolic process

protein neddylation

regulation of protein metabolic process

Ubiquitin mediated proteolysis

211961_s_at -0.534 9.232 -3.583 2.666e-03 0.097 -1.502 RAB7A RAB7A, member RAS oncogene family 3 129927668 AK000826 3q21.3 Hs.15738 Hs.716392 64

nucleotide binding

GTPase activity

protein binding

GTP binding

cytoplasm

lysosome

late endosome

Golgi apparatus

endocytosis

small GTPase mediated signal transduction

protein transport

cytoplasmic vesicle

melanosome

phagocytic vesicle

 
218023_s_at -0.532 8.354 -3.583 2.669e-03 0.097 -1.503 FAM53C family with sequence similarity 53, member C 5 137701122, 137701602 NM_016605 5q31 Hs.716415 7    
222447_at -0.534 7.726 -3.582 2.669e-03 0.097 -1.503 METTL9 methyltransferase like 9 16 21518356 BC000195 16p13-p12 Hs.279583 6    
1569029_at 0.398 3.286 3.582 2.671e-03 0.097 -1.504 MAP1D methionine aminopeptidase 1D 2 172573049 AA442226 2q31.1 Hs.298250 4

aminopeptidase activity

mitochondrion

proteolysis

peptidase activity

metalloexopeptidase activity

cellular process

peptidyl-methionine modification

N-terminal protein amino acid modification

metal ion binding

cobalt ion binding

 
211721_s_at 0.383 3.175 3.582 2.672e-03 0.097 -1.504 ZNF551 zinc finger protein 551 19 62885168 BC005868 19q13.43 Hs.109540 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
229337_at -0.557 7.584 -3.581 2.675e-03 0.097 -1.505 USP2 ubiquitin specific peptidase 2 11 -118731134, -118731134 AW274034 11q23.3 Hs.524085 15

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

protein binding

cytoplasm

plasma membrane

ubiquitin-dependent protein catabolic process

peptidase activity

 
214186_s_at 0.324 6.647 3.581 2.676e-03 0.097 -1.506 HCG26 HLA complex group 26 (non-protein coding) 6 31546984, 2885166 AI346483 6p21.3 Hs.132807 3    
237447_at 0.450 5.134 3.581 2.677e-03 0.097 -1.506 C22orf45 chromosome 22 open reading frame 45 22   BF509218 22q11.23 Hs.712771 2    
222921_s_at -0.420 6.677 -3.581 2.678e-03 0.097 -1.506 HEY2 hairy/enhancer-of-split related with YRPW motif 2 6 126112424 AF232238 6q21 Hs.144287 23

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

Notch signaling pathway

multicellular organismal development

nervous system development

organ morphogenesis

 
207284_s_at -0.571 6.962 -3.581 2.678e-03 0.097 -1.506 ASPH aspartate beta-hydroxylase 8 -62739837, -62699648, -62699648, -62575669 NM_020164 8q12.1 Hs.591874 24

peptide-aspartate beta-dioxygenase activity

binding

iron ion binding

calcium ion binding

endoplasmic reticulum

endoplasmic reticulum membrane

muscle contraction

pattern specification process

negative regulation of cell proliferation

structural constituent of muscle

electron carrier activity

membrane

integral to membrane

oxidoreductase activity

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

peptidyl-amino acid modification

integral to endoplasmic reticulum membrane

limb morphogenesis

peptidyl-aspartic acid hydroxylation

oxidation reduction

palate development

face morphogenesis

 
228461_at 0.494 6.567 3.581 2.680e-03 0.097 -1.507 SH3RF3 SH3 domain containing ring finger 3 2 109112428 AL566989 2q13 Hs.171244 Hs.535157 2

protein binding

zinc ion binding

metal ion binding

 
206833_s_at -0.570 10.363 -3.580 2.683e-03 0.097 -1.508 ACYP2 acylphosphatase 2, muscle type 2 54195913 NM_001108 2p16.2 Hs.516173 Hs.642983 16

acylphosphatase activity

phosphate metabolic process

hydrolase activity

Pyruvate metabolism

Benzoate degradation via CoA ligation

222125_s_at 0.341 6.465 3.580 2.683e-03 0.097 -1.508 P4HTM prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) 3 49002344 BC000580 3p21.31 Hs.654944 9

iron ion binding

calcium ion binding

endoplasmic reticulum

membrane

integral to membrane

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

L-ascorbic acid binding

oxidation reduction

 
232173_at 0.403 5.724 3.578 2.693e-03 0.097 -1.512 CLEC2L C-type lectin domain family 2, member L 7 138859213 W60866 7q34 Hs.57806 3

binding

sugar binding

membrane

integral to membrane

 
230264_s_at -0.547 9.723 -3.578 2.696e-03 0.097 -1.513 AP1S2 adaptor-related protein complex 1, sigma 2 subunit X -15753849 AA551090 Xp22.2 Hs.653504 Hs.656471 21

protein binding

Golgi apparatus

cytosol

coated pit

intracellular protein transport

endocytosis

protein transporter activity

membrane

clathrin coat of trans-Golgi network vesicle

clathrin adaptor complex

cytoplasmic vesicle

Lysosome

210389_x_at -0.502 5.765 -3.578 2.696e-03 0.097 -1.513 TUBD1 tubulin, delta 1 17 -55291632 BC000258 17q23.1 Hs.463638 7

nucleotide binding

GTPase activity

structural molecule activity

GTP binding

nucleus

cytoplasm

centriole

microtubule

microtubule-based movement

multicellular organismal development

spermatogenesis

cell differentiation

protein complex

protein polymerization

 
243309_at -0.643 5.284 -3.577 2.698e-03 0.097 -1.514 FLJ27352 hypothetical LOC145788 15   AA398658 15q21.3 Hs.97300      
1555982_at -0.253 2.406 -3.577 2.699e-03 0.097 -1.514 ZFYVE16 zinc finger, FYVE domain containing 16 5 79739593 BU078629 5q14 Hs.482660 Hs.660410 15

protein binding

phosphatidylinositol binding

cytoplasm

protein targeting to lysosome

signal transduction

zinc ion binding

protein transporter activity

membrane

vesicle organization

endosome transport

regulation of endocytosis

BMP signaling pathway

early endosome membrane

metal ion binding

TGF-beta signaling pathway

223229_at -0.569 6.718 -3.577 2.701e-03 0.097 -1.514 UBE2T ubiquitin-conjugating enzyme E2T (putative) 1 -200567408 AB032931 1q32.1 Hs.5199 10

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

 
222550_at -0.353 8.687 -3.576 2.705e-03 0.097 -1.516 ARMC1 armadillo repeat containing 1 8 -66677627 AK024053 8q13.1 Hs.269542 3

binding

metal ion transport

metal ion binding

 
208946_s_at -0.531 8.279 -3.575 2.711e-03 0.098 -1.518 BECN1 beclin 1, autophagy related 17 -38215675 AF139131 17q21 Hs.716464 56

protein binding

cytoplasm

Golgi apparatus

trans-Golgi network

autophagy

anti-apoptosis

cellular defense response

negative regulation of cell proliferation

response to virus

membrane

cytoplasmic membrane-bounded vesicle

positive regulation of macroautophagy

protein complex

Regulation of autophagy

232244_at -0.963 6.557 -3.575 2.712e-03 0.098 -1.518 KIAA1161 KIAA1161 9 -34358906 AB032987 9p13.3 Hs.522083 3

hydrolase activity, hydrolyzing O-glycosyl compounds

carbohydrate metabolic process

metabolic process

membrane

integral to membrane

 
211576_s_at 0.321 5.703 3.574 2.716e-03 0.098 -1.520 SLC19A1 solute carrier family 19 (folate transporter), member 1 21 -45759056 BC003068 21q22.3 Hs.84190 93

folic acid binding

membrane fraction

integral to plasma membrane

transport

folic acid transporter activity

reduced folate carrier activity

methotrexate transporter activity

folic acid transport

membrane

 
225915_at -1.068 5.996 -3.573 2.721e-03 0.098 -1.521 CAB39L calcium binding protein 39-like 13 -48780786, -48780786 AL138875 13q14.2 Hs.87159 9

protein binding

mTOR signaling pathway

227084_at -1.271 8.938 -3.572 2.727e-03 0.098 -1.523 DTNA dystrobrevin, alpha 18 30327251, 30327251, 30327251, 30427279, 30544193, 30589937, 30589937, 30652299, 30652299 AW339310 18q12 Hs.643454 38

calcium ion binding

protein binding

cytoplasm

striated muscle contraction

signal transduction

neuromuscular synaptic transmission

zinc ion binding

cell junction

synapse

 
208204_s_at -0.762 9.284 -3.570 2.737e-03 0.098 -1.527 CAV3 caveolin 3 3 8750495 NM_001234 3p25 Hs.98303 73

membrane fraction

Golgi apparatus

caveola

triglyceride metabolic process

elevation of cytosolic calcium ion concentration

muscle organ development

protein C-terminus binding

protein localization

negative regulation of cardiac muscle hypertrophy

regulation of skeletal muscle contraction

dystrophin-associated glycoprotein complex

integral to membrane

cell growth

sodium channel regulator activity

Z disc

cell differentiation

T-tubule

positive regulation of microtubule polymerization

membrane raft organization

neuromuscular junction

protein complex binding

protein complex scaffold

T-tubule organization

regulation of membrane potential

glucose homeostasis

cholesterol homeostasis

negative regulation of MAP kinase activity

negative regulation of MAPKKK cascade

negative regulation of cell size

muscle maintenance

negative regulation of nitric-oxide synthase activity

regulation of calcium ion transport via voltage-gated calcium channel activity

negative regulation of sarcomere organization

regulation of ventricular cardiomyocyte membrane repolarization

Focal adhesion

225273_at 0.487 6.123 3.570 2.737e-03 0.098 -1.527 WWC3 WWC family member 3 X 9943794 AB033106 Xp22.32 Hs.527524 5    
218553_s_at 0.394 5.395 3.569 2.743e-03 0.098 -1.529 KCTD15 potassium channel tetramerisation domain containing 15 19 38979590 NM_024076 19q13.11 Hs.221873 Hs.606506 12

voltage-gated potassium channel activity

protein binding

potassium ion transport

voltage-gated potassium channel complex

membrane

 
228718_at 0.486 5.727 3.568 2.748e-03 0.098 -1.530 ZNF44 zinc finger protein 44 19 -12243624 AI379070 19p13.2 Hs.296731 Hs.693933 10

DNA binding

protein binding

intracellular

nucleus

cytoplasm

cytoskeleton

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1566134_at 0.359 6.179 3.566 2.761e-03 0.099 -1.535 CARHSP1 calcium regulated heat stable protein 1, 24kDa 16 -8854302, -8854302 AL832316 16p13.2 Hs.632184 13

DNA binding

protein binding

cytoplasm

regulation of transcription, DNA-dependent

intracellular signaling cascade

phosphatase binding

 
201905_s_at 0.582 5.396 3.565 2.769e-03 0.099 -1.538 CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like 3 37878672 BF590317 3p21.3 Hs.475963 18

molecular_function

phosphoprotein phosphatase activity

cellular_component

nucleus

biological_process

hydrolase activity

 
223716_s_at -0.356 9.448 -3.564 2.772e-03 0.099 -1.538 ZRANB2 zinc finger, RAN-binding domain containing 2 1 -71301561 AF065391 1p31 Hs.194718 18

transcription factor activity

RNA binding

protein binding

intracellular

nucleus

mRNA processing

zinc ion binding

RNA splicing

metal ion binding

 
213552_at 0.461 4.640 3.563 2.776e-03 0.099 -1.540 GLCE glucuronic acid epimerase 15 67240026 W87398 15q23 Hs.183006 9

Golgi apparatus

heparan sulfate proteoglycan biosynthetic process

membrane

integral to membrane

isomerase activity

heparin biosynthetic process

UDP-glucuronate 5'-epimerase activity

Heparan sulfate biosynthesis

Metabolic pathways

223126_s_at -0.521 7.260 -3.563 2.778e-03 0.099 -1.541 C1orf21 chromosome 1 open reading frame 21 1 182622772 AI159874 1q25 Hs.497159 Hs.719188 8    
224772_at 0.363 6.163 3.562 2.782e-03 0.099 -1.542 NAV1 neuron navigator 1 1 199884072 AB032977 1q32.3 Hs.585374 10

nucleotide binding

cytoplasm

cytoskeleton

microtubule

multicellular organismal development

nervous system development

nucleoside-triphosphatase activity

cell differentiation

 
238843_at -0.533 6.833 -3.561 2.788e-03 0.099 -1.544 NPHP1 nephronophthisis 1 (juvenile) 2 -110238202 BF216535 2q13 Hs.280388 36

structural molecule activity

protein binding

adherens junction

signal transduction

excretion

visual behavior

membrane

cell-cell adhesion

actin cytoskeleton organization

cell junction

 
229618_at -0.418 5.703 -3.560 2.798e-03 0.099 -1.547 SNX16 sorting nexin 16 8 -82874372 AW150236 8q21.13 Hs.492121 7

protein binding

cell communication

protein transport

phosphoinositide binding

 
225157_at -0.589 9.347 -3.559 2.800e-03 0.099 -1.548 MLXIP MLX interacting protein 12 121001142 AW245631 12q24.31 Hs.437153 7

DNA binding

nucleus

cytoplasm

mitochondrion

mitochondrial outer membrane

membrane

transcription regulator activity

regulation of transcription

 
230090_at -1.569 5.755 -3.559 2.801e-03 0.099 -1.548 GDNF glial cell derived neurotrophic factor 5 -37851509, -37851509, -37851509 AW296078 5p13.1-p12 Hs.248114 86

neural crest cell migration

extracellular region

anti-apoptosis

signal transduction

nervous system development

growth factor activity

adult locomotory behavior

positive regulation of specific transcription from RNA polymerase II promoter

neuron projection development

positive regulation of monooxygenase activity

positive regulation of dopamine secretion

protein homodimerization activity

negative regulation of neuron apoptosis

mRNA stabilization

regulation of dopamine uptake

 
229256_at -0.924 7.385 -3.558 2.806e-03 0.099 -1.550 PGM2L1 phosphoglucomutase 2-like 1 11 -73719008 AV724329 11q13.4 Hs.26612 6

carbohydrate metabolic process

glucose metabolic process

transferase activity

isomerase activity

intramolecular transferase activity, phosphotransferases

glucose-1,6-bisphosphate synthase activity

Starch and sucrose metabolism

203938_s_at 0.328 6.181 3.558 2.808e-03 0.099 -1.551 TAF1C TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa 16 -82768961 NM_005679 16q24 Hs.153022 17

DNA binding

RNA polymerase I transcription factor activity

nucleus

nucleoplasm

transcription

transcription from RNA polymerase I promoter

transcription from RNA polymerase II promoter

general RNA polymerase II transcription factor activity

 
226452_at 0.350 6.503 3.558 2.808e-03 0.099 -1.551 PDK1 pyruvate dehydrogenase kinase, isozyme 1 2 173129024 AU146532 2q31.1 Hs.470633 52

two-component sensor activity

nucleotide binding

pyruvate dehydrogenase (acetyl-transferring) kinase activity

ATP binding

mitochondrion

mitochondrial matrix

carbohydrate metabolic process

glucose metabolic process

signal transduction

small GTPase mediated signal transduction

transferase activity

peptidyl-histidine phosphorylation

T cell receptor signaling pathway

Fc epsilon RI signaling pathway

Neurotrophin signaling pathway

205934_at -0.776 6.897 -3.557 2.812e-03 0.099 -1.552 PLCL1 phospholipase C-like 1 2 198377670, 198377777 NM_006226 2q33 Hs.153322 Hs.593586 8

phosphoinositide phospholipase C activity

signal transducer activity

calcium ion binding

cytoplasm

lipid metabolic process

intracellular signaling cascade

 
204135_at -0.680 8.536 -3.556 2.817e-03 0.099 -1.554 FILIP1L filamin A interacting protein 1-like 3 -101049461, -101049461, -101034677 NM_014890 3q12.1 Hs.104672 8

molecular_function

nucleus

cytoplasm

biological_process

membrane

myosin complex

 
201655_s_at 0.427 8.035 3.556 2.818e-03 0.099 -1.554 HSPG2 heparan sulfate proteoglycan 2 1 -22021323 M85289 1p36.1-p34 Hs.562227 60

protein binding

extracellular region

basement membrane

cell adhesion

ECM-receptor interaction

223093_at -0.537 6.531 -3.556 2.819e-03 0.099 -1.554 ANKH ankylosis, progressive homolog (mouse) 5 -14757908 T99215 5p15.1 Hs.156727 36

skeletal system development

inorganic phosphate transmembrane transporter activity

integral to plasma membrane

transport

phosphate transport

locomotory behavior

outer membrane

outer membrane

regulation of bone mineralization

regulation of bone mineralization

inorganic diphosphate transmembrane transporter activity

 
204681_s_at 0.635 5.967 3.555 2.824e-03 0.099 -1.556 RAPGEF5 Rap guanine nucleotide exchange factor (GEF) 5 7 -22124432 NM_012294 7p15.3 Hs.174768 Hs.713217 10

intracellular

nucleus

nervous system development

Rap guanyl-nucleotide exchange factor activity

GTP-dependent protein binding

regulation of small GTPase mediated signal transduction

 
210299_s_at -0.557 12.759 -3.555 2.825e-03 0.099 -1.556 FHL1 four and a half LIM domains 1 X 135056526, 135057224, 135058402, 135079120, 135079731, 135106578, 135106720 AF063002 Xq26 Hs.435369 38

molecular_function

cellular_component

nucleus

cytoplasm

cytosol

multicellular organismal development

muscle organ development

zinc ion binding

organ morphogenesis

cell growth

cell differentiation

metal ion binding

 
208837_at 0.344 5.330 3.555 2.826e-03 0.099 -1.556 TMED3 transmembrane emp24 protein transport domain containing 3 15 77390545 BC000027 15q24-q25 Hs.513058 6

Golgi apparatus

protein transport

membrane

integral to membrane

 
203813_s_at 0.445 4.187 3.554 2.828e-03 0.099 -1.557 SLIT3 slit homolog 3 (Drosophila) 5 -168025648 NM_003062 5q35 Hs.604116 17

structural molecule activity

calcium ion binding

protein binding

extracellular region

extracellular space

multicellular organismal development

axon guidance

central nervous system development

organ morphogenesis

cell differentiation

Axon guidance

203408_s_at -0.819 9.727 -3.554 2.829e-03 0.099 -1.557 SATB1 SATB homeobox 1 3 -18364269, -18364269 NM_002971 3p23 Hs.517717 34

negative regulation of transcription from RNA polymerase II promoter

double-stranded DNA binding

transcription factor activity

nucleus

chromatin organization

regulation of transcription, DNA-dependent

sequence-specific DNA binding

 
230876_at 0.662 2.974 3.553 2.837e-03 0.099 -1.560 LOC169834 hypothetical protein LOC169834 9 -114799220 AI827906 9q32 Hs.192877 1    
225914_s_at -0.441 4.879 -3.552 2.842e-03 0.100 -1.562 CAB39L calcium binding protein 39-like 13 -48780786, -48780786 AW242839 13q14.2 Hs.87159 9

protein binding

mTOR signaling pathway

204308_s_at 0.295 6.888 3.551 2.846e-03 0.100 -1.563 TECPR2 tectonin beta-propeller repeat containing 2 14 101899130 NM_014844 14q32.31 Hs.195667 3    
228909_at 0.322 4.595 3.551 2.850e-03 0.100 -1.564 LOC642852 hypothetical LOC642852 21 45532394 AW131553 21q22.3 Hs.11637 Hs.676029 Hs.710382 2    
201457_x_at -0.415 6.984 -3.550 2.852e-03 0.100 -1.565 BUB3 budding uninhibited by benzimidazoles 3 homolog (yeast) 10 124903749 AF081496 10q26 Hs.418533 28

kinetochore

protein binding

nucleus

nucleolus

cytosol

mitosis

mitotic cell cycle checkpoint

cell proliferation

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

201316_at -0.573 8.090 -3.550 2.855e-03 0.100 -1.566 PSMA2 proteasome (prosome, macropain) subunit, alpha type, 2 7 -42922986 AL523904 7p13 Hs.333786 48

threonine-type endopeptidase activity

protein binding

nucleus

cytoplasm

cytosol

proteasome core complex

ubiquitin-dependent protein catabolic process

peptidase activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

proteolysis involved in cellular protein catabolic process

Proteasome

213961_s_at 0.468 4.398 3.549 2.861e-03 0.100 -1.568 TAF6L TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa 11 62295450 AI077556 11q12.3 Hs.714400 13

histone deacetylase complex

DNA binding

RNA polymerase II transcription factor activity

transcription coactivator activity

histone acetyltransferase activity

protein binding

nucleus

chromatin remodeling

transcription initiation

regulation of transcription from RNA polymerase II promoter

transcription initiation factor activity

STAGA complex

histone H3 acetylation

regulation of transcription factor activity

Basal transcription factors

213258_at 0.536 7.151 3.549 2.861e-03 0.100 -1.568 TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 2 -188051550, -188037202 BF511231 2q32 Hs.516578 118

serine-type endopeptidase inhibitor activity

extracellular region

extracellular region

extracellular space

plasma membrane

blood coagulation, extrinsic pathway

Complement and coagulation cascades

227666_at 0.264 4.735 3.549 2.863e-03 0.100 -1.568 DCLK2 doublecortin-like kinase 2 4 151219529 AI523594 4q31.23-q31.3 Hs.591683 4

nucleotide binding

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

intracellular signaling cascade

transferase activity

 
203234_at 0.446 6.482 3.548 2.865e-03 0.100 -1.569 UPP1 uridine phosphorylase 1 7 48094879, 48095270 NM_003364 7p12.3 Hs.488240 11

uridine phosphorylase activity

uridine phosphorylase activity

cytoplasm

cytosol

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

pyrimidine nucleotide metabolic process

nucleoside metabolic process

nucleotide catabolic process

uridine metabolic process

Pyrimidine metabolism

Drug metabolism - other enzymes

Metabolic pathways

232349_x_at -0.589 9.489 -3.547 2.870e-03 0.100 -1.571 DCAF6 DDB1 and CUL4 associated factor 6 1 166172531 BF671187 1q24.2 Hs.435741 10

nucleus

ligand-dependent nuclear receptor transcription coactivator activity

 
202760_s_at 1.018 6.045 3.547 2.870e-03 0.100 -1.571 PALM2-AKAP2 PALM2-AKAP2 readthrough transcript 9 111582397, 111582409 NM_007203 9q31-q33 Hs.591908 8    
223595_at 0.712 4.791 3.546 2.880e-03 0.100 -1.574 TMEM133 transmembrane protein 133 11 100368020 AF247167 11q22.1 Hs.44004 2

membrane

integral to membrane

 
226453_at -0.408 7.199 -3.545 2.884e-03 0.100 -1.575 RNASEH2C ribonuclease H2, subunit C 11 -65241719 BF982002 11q13.1 Hs.718438 9

nucleus

DNA replication

217883_at -0.326 11.057 -3.545 2.886e-03 0.100 -1.576 MMADHC methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria 2 -150134395 NM_015702 2q23.2 Hs.5324 7

mitochondrion

 
202059_s_at -0.583 7.441 -3.544 2.891e-03 0.100 -1.577 KPNA1 karyopherin alpha 1 (importin alpha 5) 3 -123623437 NM_002264 3q21 Hs.161008 92

regulation of DNA recombination

protein binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

cytosol

NLS-bearing substrate import into nucleus

intracellular protein transport

nuclear localization sequence binding

protein transporter activity

interspecies interaction between organisms

 
201581_at -0.527 8.777 -3.543 2.895e-03 0.100 -1.579 TMX4 thioredoxin-related transmembrane protein 4 20 -7909715 BF572868 20p12 Hs.169358 11

mitochondrion

transport

membrane

integral to membrane

electron transport chain

cell redox homeostasis

 
201580_s_at -0.567 7.082 -3.542 2.900e-03 0.100 -1.580 TMX4 thioredoxin-related transmembrane protein 4 20 -7909715 AL544094 20p12 Hs.169358 11

mitochondrion

transport

membrane

integral to membrane

electron transport chain

cell redox homeostasis

 
41858_at 0.351 6.059 3.540 2.912e-03 0.101 -1.584 PGAP2 post-GPI attachment to proteins 2 11 3775529, 3775624, 3775707, 3775765, 3785815, 3786341 AL049261 11p15.5 Hs.133968 5

Golgi membrane

endoplasmic reticulum

endoplasmic reticulum membrane

Golgi apparatus

GPI anchor biosynthetic process

protein transporter activity

membrane

integral to membrane

 
202258_s_at 0.402 8.633 3.540 2.913e-03 0.101 -1.584 N4BP2L2 NEDD4 binding protein 2-like 2 13 -31989029, -31904929 U50532 13q13.1 Hs.507680 4

molecular_function

cellular_component

biological_process

 
222617_s_at -0.571 7.394 -3.539 2.921e-03 0.101 -1.587 C10orf84 chromosome 10 open reading frame 84 10 -120058561 AI147026 10q26.11 Hs.372309 5    
231837_at -0.703 7.163 -3.539 2.922e-03 0.101 -1.587 USP28 ubiquitin specific peptidase 28 11 -113173806 AB040948 11q23 Hs.503891 9

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
241793_at -1.442 9.582 -3.538 2.929e-03 0.101 -1.589 ZMYND17 zinc finger, MYND-type containing 17 10 -74853342 BE674227 10q22.2 Hs.631823 2

zinc ion binding

metal ion binding

 
219161_s_at 0.361 5.826 3.537 2.931e-03 0.101 -1.590 CKLF chemokine-like factor 16 65143966, 65143972 NM_016951 16q21 Hs.15159 Hs.710181 12

extracellular region

extracellular space

chemotaxis

chemokine activity

cell proliferation

membrane

integral to membrane

neutrophil chemotaxis

secretion by cell

macrophage chemotaxis

lymphocyte chemotaxis

 
205237_at 0.309 3.965 3.537 2.932e-03 0.101 -1.591 FCN1 ficolin (collagen/fibrinogen domain containing) 1 9 -136941254 NM_002003 9q34 Hs.440898 20

antigen binding

receptor binding

calcium ion binding

sugar binding

extracellular region

signal transduction

opsonization

 
204115_at 0.699 8.538 3.535 2.946e-03 0.101 -1.595 GNG11 guanine nucleotide binding protein (G protein), gamma 11 7 93388951 NM_004126 7q21 Hs.83381 14

GTPase activity

signal transducer activity

heterotrimeric G-protein complex

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

hormone-mediated signaling

Chemokine signaling pathway

229585_at 0.282 3.407 3.534 2.950e-03 0.101 -1.596 ADAMTSL1 ADAMTS-like 1 9 18464103, 18464103 AI803088 9p22.2-p22.1 Hs.522019 10

extracellular region

proteinaceous extracellular matrix

peptidase activity

metallopeptidase activity

zinc ion binding

 
225195_at -0.620 6.934 -3.534 2.950e-03 0.101 -1.596 DPH3 DPH3, KTI11 homolog (S. cerevisiae) 3 -16273572 AI825858 3p25.1 Hs.388087 8

protein binding

nucleus

cytoplasm

zinc ion binding

peptidyl-diphthamide biosynthetic process from peptidyl-histidine

metal ion binding

negative regulation of protein secretion

positive regulation of binding

 
219428_s_at 0.276 6.736 3.534 2.950e-03 0.101 -1.596 PXMP4 peroxisomal membrane protein 4, 24kDa 20 -31754210 BF057649 20q11.22 Hs.654857 8

membrane fraction

peroxisome

peroxisomal membrane

membrane

integral to membrane

 
202457_s_at -0.713 9.104 -3.534 2.953e-03 0.101 -1.597 PPP3CA protein phosphatase 3 (formerly 2B), catalytic subunit, alpha isoform 4 -102163609 AA911231 4q21-q24 Hs.435512 59

protein serine/threonine phosphatase activity

iron ion binding

calcium ion binding

calmodulin binding

nucleus

cytoplasm

calcineurin complex

protein amino acid dephosphorylation

zinc ion binding

hydrolase activity

MAPK signaling pathway

Calcium signaling pathway

Apoptosis

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Long-term potentiation

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

1559101_at 0.366 5.469 3.533 2.953e-03 0.101 -1.597 FYN FYN oncogene related to SRC, FGR, YES 6 -112089177, -112089177, -112089177 AK090692 6q21 Hs.390567 326

nucleotide binding

glycoprotein binding

non-membrane spanning protein tyrosine kinase activity

ATP binding

endosome

cytosol

plasma membrane

protein amino acid phosphorylation

calcium ion transport

protein kinase cascade

multicellular organismal development

learning

feeding behavior

transferase activity

manganese ion binding

identical protein binding

interspecies interaction between organisms

metal ion binding

T cell receptor signaling pathway

Axon guidance

Focal adhesion

Adherens junction

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

Fc epsilon RI signaling pathway

Prion diseases

Pathogenic Escherichia coli infection - EHEC

224927_at 0.448 6.333 3.533 2.958e-03 0.101 -1.599 KIAA1949 KIAA1949 6 -30752145, -30752145, -2092747, -2092747, -1891047, -1891047 BG251556 6p21.3 Hs.696054 9

actin binding

cytoplasm

cytoskeleton

 
209342_s_at -0.813 6.352 -3.531 2.967e-03 0.102 -1.602 IKBKB inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta 8 42247985 AF080158 8p11.2 Hs.597664 172

nucleotide binding

B cell homeostasis

ATP binding

cytoplasm

cytosol

protein amino acid phosphorylation

IkappaB kinase activity

transcription activator activity

transferase activity

identical protein binding

positive regulation of NF-kappaB transcription factor activity

MAPK signaling pathway

Chemokine signaling pathway

Apoptosis

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

T cell receptor signaling pathway

B cell receptor signaling pathway

Neurotrophin signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

Type II diabetes mellitus

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Pancreatic cancer

Prostate cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Small cell lung cancer

202025_x_at 0.413 7.837 3.531 2.968e-03 0.102 -1.602 ACAA1 acetyl-Coenzyme A acyltransferase 1 3 -38139204 NM_001607 3p23-p22 Hs.643487 17

acetyl-CoA C-acyltransferase activity

protein binding

cytoplasm

peroxisome

generation of precursor metabolites and energy

lipid metabolic process

fatty acid metabolic process

metabolic process

acyltransferase activity

transferase activity

intracellular membrane-bounded organelle

Fatty acid metabolism

Valine, leucine and isoleucine degradation

Biosynthesis of unsaturated fatty acids

Metabolic pathways

PPAR signaling pathway

218087_s_at -0.774 10.392 -3.531 2.970e-03 0.102 -1.603 SORBS1 sorbin and SH3 domain containing 1 10 -97061519, -97061519 NM_015385 10q23.3-q24.1 Hs.719081 35

stress fiber

actin binding

SH3/SH2 adaptor activity

SH3/SH2 adaptor activity

insulin receptor binding

nucleus

cytoplasm

cytosol

cytoskeleton

plasma membrane

insulin receptor complex

zonula adherens

cell-substrate adherens junction

transport

insulin receptor signaling pathway

glucose transport

cell junction

stress fiber formation

membrane raft

positive regulation of glycogen biosynthetic process

positive regulation of glucose import

positive regulation of lipid biosynthetic process

focal adhesion formation

PPAR signaling pathway

Adherens junction

Insulin signaling pathway

212666_at -0.455 5.449 -3.530 2.972e-03 0.102 -1.603 SMURF1 SMAD specific E3 ubiquitin protein ligase 1 7 -98462999 AB046845 7q22.1 Hs.189329 34

ubiquitin-protein ligase activity

protein binding

intracellular

cytoplasm

plasma membrane

protein modification process

protein export from nucleus

ectoderm development

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

cell differentiation

negative regulation of ossification

negative regulation of BMP signaling pathway

ubiquitin-dependent SMAD protein catabolic process

positive regulation of protein ubiquitination

receptor catabolic process

protein localization at cell surface

protein ubiquitination during ubiquitin-dependent protein catabolic process

proteasomal ubiquitin-dependent protein catabolic process

activin binding

I-SMAD binding

R-SMAD binding

Ubiquitin mediated proteolysis

Endocytosis

TGF-beta signaling pathway

1560128_x_at 0.367 5.796 3.530 2.975e-03 0.102 -1.604 C5orf56 chromosome 5 open reading frame 56 5 131774571 AL713721 5q31.1 Hs.658288 1    
235579_at -0.733 6.718 -3.529 2.980e-03 0.102 -1.606 SFRS2IP splicing factor, arginine/serine-rich 2, interacting protein 12 -44599180 AA679858 12q12 Hs.715491 11

spliceosome assembly

protein binding

nucleus

DNA-directed RNA polymerase II, core complex

mRNA processing

zinc ion binding

RNA splicing

RNA splicing factor activity, transesterification mechanism

 
208966_x_at 0.493 5.949 3.529 2.983e-03 0.102 -1.607 IFI16 interferon, gamma-inducible protein 16 1 157246305 AF208043 1q22 Hs.380250 42

DNA binding

double-stranded DNA binding

protein binding

nucleus

nucleoplasm

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

cell proliferation

response to virus

transcription repressor activity

myeloid cell differentiation

monocyte differentiation

DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis

 
212032_s_at -0.450 7.334 -3.528 2.987e-03 0.102 -1.608 PTOV1 prostate tumor overexpressed 1 19 55046227 AL046054 19q13.33 Hs.587979 11

nucleus

cytoplasm

plasma membrane

regulation of transcription

perinuclear region of cytoplasm

 
214844_s_at -0.593 9.310 -3.528 2.988e-03 0.102 -1.608 DOK5 docking protein 5 20 52525672 AL050069 20q13.2 Hs.656582 10

MAPKKK cascade

transmembrane receptor protein tyrosine kinase signaling protein activity

insulin receptor binding

transmembrane receptor protein tyrosine kinase signaling pathway

nervous system development

 
221143_at -0.813 4.456 -3.527 2.995e-03 0.102 -1.610 RPA4 replication protein A4, 34kDa X 96025667 NM_013347 Xq21.33 Hs.659349 9

nucleic acid binding

single-stranded DNA binding

nucleus

DNA replication factor A complex

DNA replication

DNA replication initiation

DNA replication

Nucleotide excision repair

Mismatch repair

Homologous recombination

204528_s_at -0.446 8.114 -3.526 2.999e-03 0.102 -1.612 NAP1L1 nucleosome assembly protein 1-like 1 12 -74724938 NM_004537 12q21.2 Hs.524599 Hs.695185 17

protein binding

nucleus

chromatin assembly complex

DNA replication

nucleosome assembly

positive regulation of cell proliferation

melanosome

 
1557131_at 0.365 3.969 3.526 3.000e-03 0.102 -1.612 LOC254100 hypothetical protein LOC254100 11   BQ287966 11q13.1 Hs.595927 1    
206142_at 0.490 2.842 3.525 3.004e-03 0.102 -1.613 ZNF135 zinc finger protein 135 19 63262423 NM_003436 19q13.4 Hs.85863 6

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
219315_s_at 0.361 6.350 3.525 3.007e-03 0.102 -1.614 TMEM204 transmembrane protein 204 16 1524231 NM_024600 16p13.3 Hs.459652 7

plasma membrane

adherens junction

response to stress

integral to membrane

cell junction

 
200853_at -0.529 8.798 -3.524 3.013e-03 0.102 -1.616 H2AFZ H2A histone family, member Z 4 -101088266 NM_002106 4q24 Hs.119192 37

nucleosome

DNA binding

nucleus

chromosome

nucleosome assembly

Systemic lupus erythematosus

228162_at -0.446 5.573 -3.524 3.014e-03 0.102 -1.616 ESD esterase D/formylglutathione hydrolase 13 -46243391 AA193515 13q14.1-q14.2 Hs.432491 27

carboxylesterase activity

cytoplasm

biological_process

cytoplasmic membrane-bounded vesicle

S-formylglutathione hydrolase activity

 
238944_at 0.629 6.368 3.524 3.014e-03 0.102 -1.616 ZNF404 zinc finger protein 404 19 -49068354 AI393706 19q13.31 Hs.76561 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
213803_at -0.489 7.794 -3.522 3.023e-03 0.102 -1.619 KPNB1 karyopherin (importin) beta 1 17 43082273 BG545463 17q21.32 Hs.532793 Hs.706168 113

protein import into nucleus, docking

protein import into nucleus, translocation

nucleus

nuclear pore

nucleoplasm

cytoplasm

cytosol

NLS-bearing substrate import into nucleus

ribosomal protein import into nucleus

nuclear localization sequence binding

zinc ion binding

protein transporter activity

protein domain specific binding

interspecies interaction between organisms

 
225632_s_at 0.484 5.494 3.522 3.024e-03 0.102 -1.619 RAB43 RAB43, member RAS oncogene family 3 -130289107 BE736242 3q21.3 Hs.709807 6

nucleotide binding

GTP binding

plasma membrane

small GTPase mediated signal transduction

protein transport

 
202374_s_at -0.301 6.766 -3.522 3.025e-03 0.102 -1.620 RAB3GAP2 RAB3 GTPase activating protein subunit 2 (non-catalytic) 1 -218388232 NM_012414 1q41 Hs.654849 Hs.708165 14

GTPase activator activity

protein binding

soluble fraction

cytoplasm

intracellular protein transport

regulation of GTPase activity

protein heterodimerization activity

 
41644_at 0.451 7.141 3.521 3.029e-03 0.102 -1.621 SASH1 SAM and SH3 domain containing 1 6 148705421 AB018333 6q24.3 Hs.193133 12

protein binding

 
1555837_s_at -0.414 9.723 -3.521 3.030e-03 0.102 -1.621 POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 4 57539865 BE614461 4q12 Hs.602757 92

magnesium ion binding

nuclear mRNA splicing, via spliceosome

DNA binding

DNA-directed RNA polymerase activity

protein binding

nucleus

nucleoplasm

DNA-directed RNA polymerase II, core complex

transcription

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

zinc ion binding

transferase activity

nucleotidyltransferase activity

ribonucleoside binding

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

Huntington's disease

222437_s_at -0.401 9.163 -3.521 3.031e-03 0.102 -1.621 VPS24 vacuolar protein sorting 24 homolog (S. cerevisiae) 2 -86584063 BC004419 2p24.3-p24.1 Hs.591582 25

protein binding

cytoplasm

endosome

cytosol

cell cycle

protein transport

membrane

late endosome membrane

cell division

Endocytosis

217995_at -0.497 9.138 -3.521 3.033e-03 0.102 -1.622 SQRDL sulfide quinone reductase-like (yeast) 15 43714547 NM_021199 15q15 Hs.511251 6

mitochondrion

mitochondrial inner membrane

oxidoreductase activity

oxidation reduction

 
227195_at 0.738 5.934 3.520 3.038e-03 0.102 -1.623 ZNF503 zinc finger protein 503 10 -76827610 AA603467 10q22.2 Hs.195710 6

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
209366_x_at 0.392 7.625 3.519 3.040e-03 0.102 -1.624 CYB5A cytochrome b5 type A (microsomal) 18 -70071506 M22865 18q23 Hs.465413 38

aldo-keto reductase activity

cytochrome-c oxidase activity

cytoplasm

mitochondrion

mitochondrial outer membrane

endoplasmic reticulum

microsome

transport

membrane

integral to membrane

heme binding

electron transport chain

metal ion binding

 
222092_at 0.305 5.431 3.519 3.046e-03 0.102 -1.626 PTPN21 protein tyrosine phosphatase, non-receptor type 21 14 -88001874 BF116199 14q31.3 Hs.437040 10

protein tyrosine phosphatase activity

binding

cytoplasm

cytoskeleton

protein amino acid dephosphorylation

hydrolase activity

 
211715_s_at 0.742 7.004 3.518 3.048e-03 0.102 -1.626 BDH1 3-hydroxybutyrate dehydrogenase, type 1 3 -198721050, -198721050 BC005844 3q29 Hs.274539 11

3-hydroxybutyrate dehydrogenase activity

3-hydroxybutyrate dehydrogenase activity

binding

mitochondrion

mitochondrial inner membrane

mitochondrial matrix

mitochondrial matrix

oxidoreductase activity

oxidation reduction

Synthesis and degradation of ketone bodies

Butanoate metabolism

Metabolic pathways

211323_s_at 0.506 4.727 3.518 3.049e-03 0.102 -1.627 ITPR1 inositol 1,4,5-triphosphate receptor, type 1 3 4510033 L38019 3p26-p25 Hs.567295 Hs.715765 87

response to hypoxia

ion channel activity

inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity

calcium channel activity

calcium channel activity

calcium ion binding

protein binding

endoplasmic reticulum

ion transport

calcium ion transport

signal transduction

cell death

calcium ion transmembrane transporter activity

membrane

integral to membrane

platelet dense granule membrane

platelet dense tubular network membrane

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Gap junction

Long-term potentiation

Long-term depression

GnRH signaling pathway

Alzheimer's disease

Huntington's disease

239435_x_at 0.346 6.468 3.517 3.054e-03 0.102 -1.628 SHROOM1 shroom family member 1 5 -132185910 AA588854 5q31.1 Hs.519574 4

cell morphogenesis

cytoplasm

cytoskeleton

microtubule

myosin II complex

actin filament binding

actin filament bundle formation

 
209621_s_at -0.696 12.315 -3.517 3.057e-03 0.102 -1.629 PDLIM3 PDZ and LIM domain 3 4 -186659844 AF002280 4q35 Hs.85862 12

nucleus

nucleolus

cytoplasm

actin filament organization

heart development

cytoskeletal protein binding

zinc ion binding

structural constituent of muscle

actin cytoskeleton

Z disc

metal ion binding

 
201613_s_at 0.397 5.325 3.517 3.057e-03 0.102 -1.629 AP1G2 adaptor-related protein complex 1, gamma 2 subunit 14 -23098616 BC000519 14q11.2 Hs.343244 23

protein binding

cytoplasm

endosome

Golgi-associated vesicle

plasma membrane

intracellular protein transport

protein transporter activity

vesicle-mediated transport

membrane coat

AP-1 adaptor complex

transport vesicle

cytoplasmic vesicle

interspecies interaction between organisms

 
219600_s_at -0.885 6.912 -3.516 3.059e-03 0.102 -1.630 TMEM50B transmembrane protein 50B 21 -33743317 NM_006134 21q22.11 Hs.433668 8

molecular_function

endoplasmic reticulum

plasma membrane

biological_process

integral to membrane

 
220992_s_at -0.612 7.704 -3.516 3.061e-03 0.102 -1.630 C1orf25 chromosome 1 open reading frame 25 1 -183353840 NM_030934 1q25.2 Hs.107149 6

RNA binding

tRNA (guanine-N2-)-methyltransferase activity

intracellular

behavior

tRNA processing

zinc ion binding

metal ion binding

 
225782_at -0.775 9.363 -3.516 3.061e-03 0.102 -1.631 MSRB3 methionine sulfoxide reductase B3 12 63958754 AW027333 12q14.3 Hs.339024 6

mitochondrion

endoplasmic reticulum

peptide-methionine-(S)-S-oxide reductase activity

zinc ion binding

oxidoreductase activity

metal ion binding

oxidation reduction

 
204215_at 0.543 5.143 3.516 3.062e-03 0.102 -1.631 C7orf23 chromosome 7 open reading frame 23 7 -86663413 NM_024315 7q21.1-q21.2 Hs.719226 4

membrane

integral to membrane

 
201136_at -0.709 7.879 -3.514 3.073e-03 0.102 -1.634 PLP2 proteolipid protein 2 (colonic epithelium-enriched) X 48915216 NM_002668 Xp11.23 Hs.77422 12

protein binding

membrane fraction

endoplasmic reticulum

endoplasmic reticulum membrane

plasma membrane

ion transport

chemotaxis

ion transmembrane transporter activity

integral to membrane

cytokine-mediated signaling pathway

chemokine binding

 
213168_at -0.473 7.962 -3.514 3.076e-03 0.102 -1.635 SP3 Sp3 transcription factor 2 -174481504, -174481503 AU145005 2q31 Hs.531587 126

ossification

natural killer cell differentiation

trophectodermal cell differentiation

liver development

embryonic placenta development

DNA binding

chromatin binding

double-stranded DNA binding

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

transcription activator activity

transcription repressor activity

B cell differentiation

T cell differentiation

megakaryocyte differentiation

monocyte differentiation

lung development

granulocyte differentiation

enucleate erythrocyte differentiation

metal ion binding

embryonic camera-type eye morphogenesis

embryonic skeletal system development

embryonic process involved in female pregnancy

definitive hemopoiesis

 
232184_at -0.309 2.824 -3.514 3.077e-03 0.102 -1.635 ALS2 amyotrophic lateral sclerosis 2 (juvenile) 2 -202332427, -202273231 AK023024 2q33.1 Hs.471096 Hs.621812 36

ruffle

guanyl-nucleotide exchange factor activity

Ran guanyl-nucleotide exchange factor activity

protein binding

intracellular

early endosome

centrosome

cytosol

endosome organization

cell death

Rab guanyl-nucleotide exchange factor activity

Rab GTPase binding

Rab GTPase binding

lamellipodium

dendrite

Rac guanyl-nucleotide exchange factor activity

positive regulation of Rac GTPase activity

positive regulation of Rac protein signal transduction

regulation of Rho protein signal transduction

vesicular fraction

protein homodimerization activity

protein complex

protein serine/threonine kinase activator activity

positive regulation of protein kinase activity

neuron projection morphogenesis

regulation of endosome size

Amyotrophic lateral sclerosis (ALS)

228155_at 0.868 9.301 3.512 3.090e-03 0.103 -1.639 C10orf58 chromosome 10 open reading frame 58 10 82158221, 82163570 BF512388 10q23.1 Hs.500333 Hs.718589 10

extracellular region

 
226055_at -0.807 7.210 -3.510 3.097e-03 0.103 -1.641 ARRDC2 arrestin domain containing 2 19 17972943, 17979976 AK000689 19p13.11 Hs.515249 6    
1560276_at 0.699 7.318 3.510 3.098e-03 0.103 -1.642 LOC283403 hypothetical protein LOC283403 12   BC038743 12q13.13 Hs.667179 1    
221932_s_at 0.395 10.590 3.510 3.100e-03 0.103 -1.642 GLRX5 glutaredoxin 5 14 95071075 AA133341 14q32.13 Hs.532683 Hs.719204 5

mitochondrion

electron carrier activity

protein disulfide oxidoreductase activity

cell redox homeostasis

 
229980_s_at -0.511 9.177 -3.510 3.102e-03 0.103 -1.643 SNX5 sorting nexin 5 20 -17870243, -17870243 AA131508 20p11 Hs.316890 14

protein binding

cell communication

protein transport

phosphoinositide binding

 
201713_s_at -0.389 9.152 -3.509 3.104e-03 0.103 -1.643 RANBP2 RAN binding protein 2 2 108702368 D42063 2q12.3 Hs.199561 Hs.715056 61

peptidyl-prolyl cis-trans isomerase activity

protein binding

intracellular

nucleus

nuclear pore

cytosol

protein folding

protein import into nucleus

zinc ion binding

Ran GTPase binding

protein transport

isomerase activity

modification-dependent protein catabolic process

metal ion binding

intracellular transport

mRNA transport

intracellular protein transmembrane transport

 
1553071_a_at -0.852 6.578 -3.509 3.105e-03 0.103 -1.644 MYOZ3 myozenin 3 5 150020596 NM_133371 5q33.1 Hs.91626 7

protein binding

cytoplasm

Z disc

 
210250_x_at -0.509 10.180 -3.508 3.111e-03 0.103 -1.646 ADSL adenylosuccinate lyase 22 39072449 AF067854 22q13.1 22q13.2 Hs.75527 29

N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity

N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity

cytoplasm

cytosol

AMP biosynthetic process

purine ribonucleotide biosynthetic process

lyase activity

protein tetramerization

(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity

Purine metabolism

Alanine, aspartate and glutamate metabolism

Biosynthesis of alkaloids derived from histidine and purine

Metabolic pathways

225892_at -0.526 7.854 -3.508 3.115e-03 0.103 -1.647 IREB2 iron-responsive element binding protein 2 15 76517572 BF438417 15q25.1 Hs.436031 28

RNA binding

iron ion binding

cytoplasm

cytosol

regulation of translation

protoporphyrinogen IX biosynthetic process

cellular iron ion homeostasis

metabolic process

post-embryonic development

regulation of gene expression

iron-responsive element binding

erythrocyte homeostasis

metal ion binding

intestinal absorption

4 iron, 4 sulfur cluster binding

 
209536_s_at 0.448 6.265 3.507 3.117e-03 0.103 -1.647 EHD4 EH-domain containing 4 15 -39978932 AF320070 15q11.1 Hs.143703 11

nucleotide binding

nucleic acid binding

GTPase activity

calcium ion binding

protein binding

ATP binding

GTP binding

nucleus

endosome

endoplasmic reticulum

membrane

Endocytosis

226764_at 0.367 5.671 3.506 3.125e-03 0.103 -1.650 ZNF827 zinc finger protein 827 4 -146901337 BG542955 4q31.21-q31.22 Hs.133916 Hs.633543 7

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
239261_s_at 0.316 4.830 3.506 3.128e-03 0.103 -1.650 CORIN corin, serine peptidase 4 -47290774 AI338960 4p13-p12 Hs.518618 15

serine-type endopeptidase activity

scavenger receptor activity

plasma membrane

integral to plasma membrane

proteolysis

lipid metabolic process

regulation of blood pressure

peptidase activity

anatomical structure morphogenesis

cell surface

 
1570020_at 0.314 2.756 3.504 3.135e-03 0.103 -1.653 AACSL acetoacetyl-CoA synthetase-like 5 -178124469 BC024222 5q35.3 Hs.382790 2    
212928_at 0.347 6.685 3.504 3.139e-03 0.103 -1.654 TSPYL4 TSPY-like 4 6 -116677823 AL050331 6q22.1 Hs.284141 7

nucleus

nucleosome assembly

 
220107_s_at -0.335 5.537 -3.504 3.140e-03 0.103 -1.654 FAM164C family with sequence similarity 164, member C 14 74606051 NM_024643 14q24.3 Hs.48642 5    
223737_x_at 0.298 2.818 3.503 3.143e-03 0.103 -1.655 CHST9 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9 18 -22740443 AF239821 18q11.2 Hs.44584 8

N-acetylgalactosamine 4-O-sulfotransferase activity

N-acetylgalactosamine 4-O-sulfotransferase activity

extracellular region

Golgi apparatus

sulfur metabolic process

membrane

integral to membrane

carbohydrate biosynthetic process

transferase activity

proteoglycan biosynthetic process

glycosaminoglycan metabolic process

hormone biosynthetic process

 
201237_at -0.723 9.127 -3.503 3.146e-03 0.103 -1.656 CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 7 116289798 AV685920 7q31.2-q31.3 Hs.446123 14

actin binding

protein binding

protein complex assembly

cell motion

F-actin capping protein complex

actin cytoskeleton organization

actin filament capping

 
1552790_a_at -0.566 6.847 -3.503 3.147e-03 0.103 -1.656 SEC62 SEC62 homolog (S. cerevisiae) 3 171167273 NM_153039 3q26.2 Hs.622596 10

receptor activity

endoplasmic reticulum

cytoskeleton

cotranslational protein targeting to membrane

protein transporter activity

protein transport

membrane

integral to membrane

intracellular protein transmembrane transport

 
229085_at -1.784 5.389 -3.502 3.148e-03 0.103 -1.657 LRRC3B leucine rich repeat containing 3B 3 26639303 AW027879 3p24 Hs.517868 10

protein binding

membrane

integral to membrane

 
225776_at 0.354 5.867 3.502 3.149e-03 0.103 -1.657 RBMS2 RNA binding motif, single stranded interacting protein 2 12 55201875 AW205585 12q13.3 Hs.505729 Hs.683360 7

nucleotide binding

RNA binding

nucleus

RNA processing

 
209749_s_at 0.294 3.581 3.502 3.149e-03 0.103 -1.657 ACE angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 17 58908165, 58915908 AI623989 17q23.3 Hs.654434 1473

kidney development

angiotensin catabolic process in blood

regulation of systemic arterial blood pressure by renin-angiotensin

carboxypeptidase activity

extracellular region

extracellular space

membrane fraction

endosome

plasma membrane

proteolysis

drug binding

regulation of blood pressure

peptidase activity

metallopeptidase activity

metallopeptidase activity

peptidyl-dipeptidase activity

peptidyl-dipeptidase activity

zinc ion binding

external side of plasma membrane

regulation of smooth muscle cell migration

integral to membrane

regulation of vasoconstriction

chloride ion binding

bradykinin receptor binding

mononuclear cell proliferation

regulation of vasodilation

hormone catabolic process

hormone catabolic process

peptide catabolic process

metal ion binding

arachidonic acid secretion

hemopoietic stem cell differentiation

Renin-angiotensin system

Hypertrophic cardiomyopathy (HCM)

227970_at -0.608 8.917 -3.501 3.156e-03 0.103 -1.659 GPR157 G protein-coupled receptor 157 1 -9087062 AK026883 1p36.23 Hs.632367 5

G-protein coupled receptor activity

plasma membrane

G-protein coupled receptor protein signaling pathway

integral to membrane

 
225607_at -0.393 8.256 -3.501 3.157e-03 0.103 -1.659 CCDC43 coiled-coil domain containing 43 17 -40110330 AI948491 17q21.31 Hs.579115 2    
242528_at 0.276 3.103 3.501 3.158e-03 0.103 -1.660 LOC285943 hypothetical protein LOC285943 7   AI473887 7p15.2 Hs.714774 1    
231718_at -0.539 7.081 -3.501 3.159e-03 0.103 -1.660 SLU7 SLU7 splicing factor homolog (S. cerevisiae) 5 -159761225 NM_006425 5q33.3 Hs.435342 9

alternative nuclear mRNA splicing, via spliceosome

second spliceosomal transesterification activity

nuclear mRNA 3'-splice site recognition

nucleic acid binding

nucleus

spliceosomal complex

cytoplasm

mRNA processing

zinc ion binding

RNA splicing

nuclear speck

small nuclear ribonucleoprotein complex

pre-mRNA 3'-splice site binding

metal ion binding

 
203729_at 0.380 5.601 3.501 3.160e-03 0.103 -1.660 EMP3 epithelial membrane protein 3 19 53520440 NM_001425 19q13.3 Hs.9999 14

negative regulation of cell proliferation

membrane

integral to membrane

cell growth

 
231014_at 0.301 4.971 3.500 3.162e-03 0.103 -1.661 TRIM50 tripartite motif-containing 50 7 -72364470 BG413545 7q11.23 Hs.647053 4

protein binding

intracellular

cytoplasm

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
222648_at 0.354 5.401 3.500 3.166e-03 0.103 -1.662 TBC1D16 TBC1 domain family, member 16 17 -75528413 BC000248 17q25.3 Hs.369819 4

GTPase activator activity

Rab GTPase activator activity

intracellular

regulation of Rab GTPase activity

 
213603_s_at 0.471 5.445 3.499 3.168e-03 0.103 -1.662 RAC2 ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) 22 -35951255 BE138888 22q13.1 Hs.517601 58

nucleotide binding

GTPase activity

protein binding

GTP binding

intracellular

membrane fraction

nuclear envelope

cytoplasm

chemotaxis

signal transduction

small GTPase mediated signal transduction

positive regulation of cell proliferation

regulation of hydrogen peroxide metabolic process

cell projection assembly

actin cytoskeleton organization

regulation of respiratory burst

MAPK signaling pathway

Chemokine signaling pathway

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Focal adhesion

Adherens junction

Natural killer cell mediated cytotoxicity

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Pathways in cancer

Colorectal cancer

Pancreatic cancer

226004_at -0.355 6.141 -3.499 3.171e-03 0.103 -1.663 CABLES2 Cdk5 and Abl enzyme substrate 2 20 -60397080 AI910855 20q13.33 Hs.301040 5

cyclin-dependent protein kinase regulator activity

regulation of cell division

regulation of cell cycle

 
202004_x_at 0.329 9.011 3.499 3.174e-03 0.103 -1.664 SDHC succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa 1 159550789 NM_003001 1q23.3 Hs.444472 27

succinate dehydrogenase activity

iron ion binding

mitochondrion

mitochondrial inner membrane

mitochondrial inner membrane

tricarboxylic acid cycle

transport

electron carrier activity

membrane

integral to membrane

electron transport chain

respiratory chain complex II

metal ion binding

Citrate cycle (TCA cycle)

Oxidative phosphorylation

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

242272_at 0.348 5.954 3.499 3.174e-03 0.103 -1.664 ZNF785 zinc finger protein 785 16 -30499494 AI375066 16p11.2 Hs.513509 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
241602_at 0.262 6.195 3.498 3.180e-03 0.103 -1.666 ZNF582 zinc finger protein 582 19 -61586459 BG432829 19q13.43 Hs.244391 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
232052_at 0.264 6.015 3.497 3.186e-03 0.103 -1.668 LOC440944 hypothetical LOC440944 3 -9405536 AL110136 3p25.3 Hs.598958 Hs.652556 2    
225161_at -0.505 7.141 -3.496 3.188e-03 0.103 -1.668 GFM1 G elongation factor, mitochondrial 1 3 159845010 AI659020 3q25.1-q26.2 Hs.518355 11

nucleotide binding

translation elongation factor activity

GTPase activity

GTP binding

intracellular

mitochondrion

translational elongation

 
235532_at 0.340 3.365 3.495 3.194e-03 0.103 -1.670 PIGM phosphatidylinositol glycan anchor biosynthesis, class M 1 -158264085 AI631888 1q23.2 Hs.552810 7

endoplasmic reticulum

endoplasmic reticulum membrane

membrane

integral to membrane

preassembly of GPI anchor in ER membrane

transferase activity, transferring hexosyl groups

Glycosylphosphatidylinositol(GPI)-anchor biosynthesis

Metabolic pathways

1552326_a_at -0.430 3.999 -3.495 3.196e-03 0.103 -1.671 CCDC11 coiled-coil domain containing 11 18 -46007561 NM_145020 18q21.1 Hs.658630 4

molecular_function

cellular_component

biological_process

 
218563_at 0.299 11.096 3.495 3.197e-03 0.103 -1.671 NDUFA3 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa 19 59297971 NM_004542 19q13.42 Hs.198269 7

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

transport

NADH dehydrogenase (ubiquinone) activity

membrane

integral to membrane

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

202353_s_at -0.438 9.140 -3.495 3.198e-03 0.103 -1.671 PSMD12 proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 17 -62767081, -62767080 NM_002816 17q24.2 Hs.646575 39

protein binding

cytosol

proteasome regulatory particle

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

205693_at -1.129 11.618 -3.494 3.201e-03 0.103 -1.672 TNNT3 troponin T type 3 (skeletal, fast) 11 1897374 NM_006757 11p15.5 Hs.73454 21

skeletal muscle contraction

actin binding

tropomyosin binding

tropomyosin binding

troponin complex

regulation of striated muscle contraction

troponin C binding

calcium-dependent ATPase activity

troponin I binding

regulation of ATPase activity

calcium-dependent protein binding

 
202090_s_at 0.306 11.887 3.494 3.204e-03 0.103 -1.673 UQCR ubiquinol-cytochrome c reductase, 6.4kDa subunit 19 -1548170 NM_006830 19p13.3 Hs.8372 4

mitochondrion

mitochondrial inner membrane

mitochondrial electron transport, ubiquinol to cytochrome c

transport

ubiquinol-cytochrome-c reductase activity

electron carrier activity

membrane

integral to membrane

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Cardiac muscle contraction

Alzheimer's disease

Parkinson's disease

Huntington's disease

213883_s_at -0.387 8.535 -3.492 3.215e-03 0.104 -1.676 TM2D1 TM2 domain containing 1 1 -61919306 AA012917 1p31.3 Hs.656790 5

beta-amyloid binding

G-protein coupled receptor activity

integral to plasma membrane

apoptosis

induction of apoptosis by extracellular signals

membrane

 
236381_s_at -0.598 5.023 -3.492 3.218e-03 0.104 -1.677 WDR8 WD repeat domain 8 1 -3537191 AW572779 1p36.3 Hs.31714 8

protein binding

cytoplasm

 
206137_at 0.358 4.715 3.492 3.218e-03 0.104 -1.677 RIMS2 regulating synaptic membrane exocytosis 2 8 104582151, 104900591 NM_014677 8q22.3 Hs.655271 18

protein binding

plasma membrane

intracellular protein transport

zinc ion binding

Rab GTPase binding

cell junction

synapse

metal ion binding

 
233750_s_at -0.652 5.204 -3.491 3.223e-03 0.104 -1.678 C1orf25 chromosome 1 open reading frame 25 1 -183353840 AL109865 1q25.2 Hs.107149 6

RNA binding

tRNA (guanine-N2-)-methyltransferase activity

intracellular

behavior

tRNA processing

zinc ion binding

metal ion binding

 
215051_x_at 0.370 6.210 3.490 3.230e-03 0.104 -1.680 AIF1 allograft inflammatory factor 1 6 31690972, 31691011, 31691767, 3029118, 3029157, 3029913, 2830581, 2830620, 2831376 BF213829 6p21.3 Hs.76364 38

calcium ion binding

nucleus

response to stress

inflammatory response

cell cycle arrest

negative regulation of cell proliferation

 
221231_s_at -0.330 4.221 -3.489 3.236e-03 0.104 -1.682 C14orf102 chromosome 14 open reading frame 102 14 -89814150 NM_017970 14q32.11 Hs.528131 4

protein binding

 
206287_s_at -1.090 7.677 -3.488 3.243e-03 0.104 -1.684 ITIH4 inter-alpha (globulin) inhibitor H4 (plasma Kallikrein-sensitive glycoprotein) 3 -52822045 NM_002218 3p21-p14 Hs.709406 19

serine-type endopeptidase inhibitor activity

extracellular region

acute-phase response

hyaluronan metabolic process

 
210976_s_at -0.599 12.191 -3.488 3.244e-03 0.104 -1.684 PFKM phosphofructokinase, muscle 12 46799294 U24183 12q13.3 Hs.75160 35

nucleotide binding

magnesium ion binding

6-phosphofructokinase activity

6-phosphofructokinase activity

6-phosphofructokinase activity

ATP binding

sugar binding

soluble fraction

cytoplasm

cytosol

cytosol

6-phosphofructokinase complex

fructose 6-phosphate metabolic process

glycolysis

protein C-terminus binding

kinase activity

apical plasma membrane

transferase activity

kinase binding

fructose 1,6-bisphosphate metabolic process

positive regulation of insulin secretion

glucose homeostasis

identical protein binding

muscle maintenance

protein oligomerization

fructose-6-phosphate binding

Glycolysis / Gluconeogenesis

Pentose phosphate pathway

Fructose and mannose metabolism

Galactose metabolism

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

221433_at 1.682 5.684 3.488 3.245e-03 0.104 -1.685 FGF21 fibroblast growth factor 21 19 53951155 NM_019113 19q13.1-qter Hs.283015 17

extracellular region

soluble fraction

signal transduction

cell-cell signaling

growth factor activity

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

202965_s_at 1.123 5.376 3.487 3.249e-03 0.104 -1.686 CAPN6 calpain 6 X -110374986 NM_014289 Xq23 Hs.496593 8

calcium-dependent cysteine-type endopeptidase activity

intracellular

proteolysis

 
225426_at -0.859 8.192 -3.487 3.252e-03 0.104 -1.686 PPP6C protein phosphatase 6, catalytic subunit 9 -126948672 AW195360 9q33.3 Hs.715605 16

G1/S transition of mitotic cell cycle

protein serine/threonine phosphatase activity

iron ion binding

protein binding

cytoplasm

cytosol

protein amino acid dephosphorylation

cell cycle

hydrolase activity

manganese ion binding

metal ion binding

 
202845_s_at -0.390 7.788 -3.487 3.254e-03 0.104 -1.687 RALBP1 ralA binding protein 1 18 9465529 NM_006788 18p11.3 Hs.528993 Hs.719181 42

GTPase activator activity

protein binding

intracellular

transport

chemotaxis

signal transduction

small GTPase mediated signal transduction

membrane

ATPase activity

Ral GTPase binding

Rac GTPase activator activity

regulation of GTPase activity

positive regulation of Cdc42 GTPase activity

ATPase activity, coupled to movement of substances

Rac GTPase binding

Pathways in cancer

Pancreatic cancer

206393_at -1.379 12.029 -3.486 3.254e-03 0.104 -1.687 TNNI2 troponin I type 2 (skeletal, fast) 11 1816808, 1817294, 1818007 NM_003282 11p15.5 Hs.523403 29

skeletal muscle contraction

actin binding

protein binding

nucleus

troponin complex

troponin T binding

positive regulation of transcription

 
212482_at -0.720 8.151 -3.486 3.256e-03 0.104 -1.688 RMND5A required for meiotic nuclear division 5 homolog A (S. cerevisiae) 2 86800924 BF671894 2p11.2 Hs.75277 7    
200867_at -0.587 7.326 -3.486 3.259e-03 0.104 -1.688 RNF114 ring finger protein 114 20 47986320 AL031685 20q13.13 Hs.144949 9

protein binding

intracellular

multicellular organismal development

spermatogenesis

zinc ion binding

cell differentiation

metal ion binding

 
222764_at 0.696 5.550 3.486 3.259e-03 0.104 -1.688 ASRGL1 asparaginase like 1 11 61861349 AI928342 11q12.3 Hs.535326 9

N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity

cytoplasm

hydrolase activity

asparagine catabolic process via L-aspartate

Alanine, aspartate and glutamate metabolism

Cyanoamino acid metabolism

Nitrogen metabolism

Metabolic pathways

203375_s_at -0.421 7.546 -3.486 3.259e-03 0.104 -1.689 TPP2 tripeptidyl peptidase II 13 102047286 NM_003291 13q32-q33 Hs.432424 23

aminopeptidase activity

serine-type endopeptidase activity

cytoplasm

proteolysis

peptidase activity

tripeptidyl-peptidase activity

 
232497_at 0.290 3.071 3.486 3.260e-03 0.104 -1.689 ZNF3 zinc finger protein 3 7 -99505529, -99499588 AF217988 7q22.1 Hs.435302 10

transcription factor activity

intracellular

nucleus

nucleus

nucleolus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

cell differentiation

identical protein binding

leukocyte activation

metal ion binding

 
218455_at 0.449 6.681 3.484 3.271e-03 0.104 -1.692 NFS1 NFS1 nitrogen fixation 1 homolog (S. cerevisiae) 20 -33720024 NM_021100 20q11.22 Hs.194692 14

protein binding

nucleus

cytoplasm

mitochondrion

mitochondrial matrix

cytosol

protein complex assembly

cysteine metabolic process

Mo-molybdopterin cofactor biosynthetic process

metabolic process

transferase activity

iron incorporation into metallo-sulfur cluster

pyridoxal phosphate binding

cysteine desulfurase activity

protein homodimerization activity

Thiamine metabolism

1556061_at -0.666 5.164 -3.484 3.271e-03 0.104 -1.692 RPP30 ribonuclease P/MRP 30kDa subunit 10 92621688, 92621688 AI760272 10q23.31 Hs.139120 16

ribonuclease P activity

ribonuclease activity

protein binding

nucleus

nucleolar ribonuclease P complex

nucleolus

tRNA processing

hydrolase activity

 
213845_at -0.702 4.027 -3.483 3.277e-03 0.104 -1.694 GRIK2 glutamate receptor, ionotropic, kainate 2 6 101953625 AL355532 6q16.3-q21 Hs.98262 53

receptor activity

ion channel activity

extracellular-glutamate-gated ion channel activity

plasma membrane

integral to plasma membrane

ion transport

glutamate signaling pathway

kainate selective glutamate receptor activity

cell junction

induction of programmed cell death in response to chemical stimulus

synapse

postsynaptic membrane

regulation of short-term neuronal synaptic plasticity

positive regulation of synaptic transmission

neuron apoptosis

Neuroactive ligand-receptor interaction

200894_s_at -0.492 6.051 -3.483 3.280e-03 0.104 -1.695 FKBP4 FK506 binding protein 4, 59kDa 12 2774368 AA894574 12p13.33 Hs.524183 Hs.713721 47

peptidyl-prolyl cis-trans isomerase activity

ATP binding

GTP binding

FK506 binding

intracellular

nucleus

nucleolus

cytoplasm

protein folding

steroid hormone receptor complex assembly

copper ion transport

embryo implantation

isomerase activity

protein binding, bridging

heat shock protein binding

protein complex localization

glucocorticoid receptor binding

male sex differentiation

phosphoprotein binding

 
222116_s_at 0.476 5.189 3.482 3.284e-03 0.104 -1.696 TBC1D16 TBC1 domain family, member 16 17 -75528413 AL157485 17q25.3 Hs.369819 4

GTPase activator activity

Rab GTPase activator activity

intracellular

regulation of Rab GTPase activity

 
221497_x_at -0.589 7.147 -3.480 3.301e-03 0.105 -1.700 EGLN1 egl nine homolog 1 (C. elegans) 1 -229566120 BC005369 1q42.1 Hs.444450 Hs.710300 42

response to hypoxia

embryonic placenta development

iron ion binding

protein binding

cytosol

heart development

zinc ion binding

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

L-ascorbic acid binding

peptidyl-proline dioxygenase activity

oxygen homeostasis

negative regulation of transcription factor activity

metal ion binding

oxidation reduction

Pathways in cancer

Renal cell carcinoma

201699_at -0.423 9.470 -3.480 3.301e-03 0.105 -1.700 PSMC6 proteasome (prosome, macropain) 26S subunit, ATPase, 6 14 52243645 NM_002806 14q22.1 Hs.156171 Hs.718586 45

nucleotide binding

proteasome complex

ATP binding

nucleus

cytoplasm

cytosol

ubiquitin-dependent protein catabolic process

hydrolase activity

ATPase activity

protein catabolic process

protein binding, bridging

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

218638_s_at 0.441 6.922 3.479 3.307e-03 0.105 -1.702 SPON2 spondin 2, extracellular matrix protein 4 -1150720, -1150720 NM_012445 4p16.3 Hs.302963 11

protein binding

extracellular region

proteinaceous extracellular matrix

immune response

cell adhesion

axon guidance

 
213160_at 0.322 3.634 3.478 3.310e-03 0.105 -1.703 DOCK2 dedicator of cytokinesis 2 5 168996828 D86964 5q35.1 Hs.586174 20

membrane raft polarization

establishment of T cell polarity

formation of immunological synapse

guanyl-nucleotide exchange factor activity

protein binding

cytoplasm

cytosol

cytoskeleton

chemotaxis

electron carrier activity

membrane

heme binding

actin cytoskeleton organization

Rac GTPase activator activity

Rac guanyl-nucleotide exchange factor activity

T cell receptor binding

positive thymic T cell selection

negative thymic T cell selection

alpha-beta T cell proliferation

lymphocyte chemotaxis

Chemokine signaling pathway

Fc gamma R-mediated phagocytosis

206394_at -1.621 12.029 -3.478 3.313e-03 0.105 -1.704 MYBPC2 myosin binding protein C, fast type 19 55627971 NM_004533 19q13.33 Hs.85937 10

actin binding

protein binding

striated muscle thick filament

striated muscle contraction

cell adhesion

structural constituent of muscle

 
214145_s_at -0.554 7.427 -3.478 3.314e-03 0.105 -1.704 SPTB spectrin, beta, erythrocytic 14 -64302901, -64282753 BG223341 14q23-q24.2 Hs.417303 62

structural constituent of cytoskeleton

protein binding

cytoplasm

cell cortex

spectrin

spectrin-associated cytoskeleton

actin cytoskeleton

intrinsic to internal side of plasma membrane

protein complex

actin filament binding

actin filament capping

 
206903_at 0.250 6.093 3.478 3.314e-03 0.105 -1.704 EXOG endo/exonuclease (5'-3'), endonuclease G-like 3 38512766 NM_005728 3p21.3 Hs.517897 6

nucleic acid binding

endonuclease activity

cellular_component

mitochondrion

mitochondrial inner membrane

biological_process

membrane

hydrolase activity

metal ion binding

Apoptosis

209563_x_at -0.384 11.120 -3.477 3.316e-03 0.105 -1.705 CALM1 calmodulin 1 (phosphorylase kinase, delta) 14 89933125 BC000454 14q24-q31 Hs.282410 Hs.708270 181  

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Glioma

218127_at -0.754 7.185 -3.477 3.317e-03 0.105 -1.705 NFYB nuclear transcription factor Y, beta 12 -103034987 AI804118 12q22-q23 Hs.84928 38

transcription factor activity

protein binding

intracellular

nucleus

CCAAT-binding factor complex

sequence-specific DNA binding

positive regulation of transcription, DNA-dependent

Antigen processing and presentation

219159_s_at 0.554 3.517 3.477 3.318e-03 0.105 -1.705 SLAMF7 SLAM family member 7 1 158975700 NM_021181 1q23.1-q24.1 Hs.517265 21

receptor activity

cell adhesion

membrane

integral to membrane

natural killer cell activation

natural killer cell mediated cytotoxicity

 
206182_at 0.417 5.196 3.476 3.328e-03 0.105 -1.708 ZNF134 zinc finger protein 134 19 62817641 NM_003435 19q13.4 Hs.469694 2

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
226411_at 0.299 6.033 3.475 3.331e-03 0.105 -1.709 EVI5L ecotropic viral integration site 5-like 19 7801160, 7817385 N32544 19p13.2 Hs.26870 7

GTPase activator activity

Rab GTPase activator activity

protein binding

intracellular

regulation of Rab GTPase activity

 
227719_at 1.612 7.120 3.475 3.335e-03 0.105 -1.710 SMAD9 SMAD family member 9 13 -36320206 AA934610 13q12-q14 Hs.123119 20

transcription factor activity

protein binding

intracellular

nucleus

nucleoplasm

transcription factor complex

cytoplasm

cytosol

regulation of transcription, DNA-dependent

transforming growth factor beta receptor signaling pathway

BMP signaling pathway

BMP signaling pathway

transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity

TGF-beta signaling pathway

232892_at 0.486 9.816 3.474 3.336e-03 0.105 -1.710 C20orf166 chromosome 20 open reading frame 166 20 60558104 AL449263 20q13.33 Hs.86507 5    
212372_at 0.915 7.144 3.474 3.339e-03 0.105 -1.711 MYH10 myosin, heavy chain 10, non-muscle 17 -8318254 AK026977 17p13 Hs.16355 37

microfilament motor activity

nucleotide binding

cytokinesis after mitosis

in utero embryonic development

stress fiber

neuron migration

plasma membrane repair

calmodulin binding

ATP binding

cytoplasm

spindle

plasma membrane

cell cortex

exocytosis

substrate-bound cell migration, cell extension

nuclear migration

axon guidance

brain development

adult heart development

biological_process

cell proliferation

regulation of cell shape

myosin complex

fourth ventricle development

lateral ventricle development

third ventricle development

cerebellar Purkinje cell layer development

actin cytoskeleton organization

actin filament-based movement

axon

growth cone

midbody

actin-dependent ATPase activity

neuron projection development

neuromuscular junction

cleavage furrow

cell soma

dendritic spine

ADP binding

neuromuscular process controlling balance

actin filament binding

cardiac myofibril assembly

ventricular cardiac muscle cell development

retina development in camera-type eye

Tight junction

Regulation of actin cytoskeleton

211761_s_at -0.355 9.436 -3.472 3.356e-03 0.105 -1.716 CACYBP calcyclin binding protein 1 173235193, 173235514 BC005975 1q24-q25 Hs.508524 15

protein binding

nucleus

cytoplasm

modification-dependent protein catabolic process

Wnt signaling pathway

202745_at -0.325 7.270 -3.472 3.356e-03 0.105 -1.716 USP8 ubiquitin specific peptidase 8 15 48503870 NM_005154 15q21.2 Hs.644563 25

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

protein binding

ubiquitin-dependent protein catabolic process

peptidase activity

cell proliferation

SH3 domain binding

Endocytosis

208632_at -0.675 7.818 -3.471 3.359e-03 0.105 -1.717 RNF10 ring finger protein 10 12 119456514 AL578551 12q24.31 Hs.442798 10

protein binding

cytoplasm

zinc ion binding

positive regulation of transcription

metal ion binding

 
209090_s_at -0.545 9.676 -3.470 3.364e-03 0.105 -1.718 SH3GLB1 SH3-domain GRB2-like endophilin B1 1 86942844 AL049597 1p22 Hs.136309 28

protein insertion into mitochondrial membrane during induction of apoptosis

fatty acid binding

protein binding

nucleus

cytoplasm

mitochondrion

mitochondrial outer membrane

microsome

Golgi apparatus

phosphatidic acid biosynthetic process

apoptosis

anti-apoptosis

phospholipid biosynthetic process

membrane

lysophosphatidic acid acyltransferase activity

protein homodimerization activity

protein complex

'de novo' posttranslational protein folding

Endocytosis

209033_s_at -0.528 9.042 -3.470 3.364e-03 0.105 -1.718 DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 21 37661728, 37713076, 37714470, 37714471 D86550 21q22.13 Hs.368240 Hs.719269 57

nucleotide binding

protein serine/threonine kinase activity

non-membrane spanning protein tyrosine kinase activity

ATP binding

nucleus

nervous system development

nuclear speck

transferase activity

peptidyl-tyrosine phosphorylation

protein self-association

protein amino acid autophosphorylation

 
221562_s_at 0.506 6.794 3.470 3.369e-03 0.105 -1.719 SIRT3 sirtuin (silent mating type information regulation 2 homolog) 3 (S. cerevisiae) 11 -205029 AF083108 11p15.5 Hs.716456 21

NAD+ ADP-ribosyltransferase activity

protein binding

cytoplasm

mitochondrion

mitochondrial matrix

chromatin silencing

protein amino acid ADP-ribosylation

protein amino acid deacetylation

zinc ion binding

membrane

hydrolase activity

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides

regulation of transcription

metal ion binding

NAD binding

 
222744_s_at 0.373 6.753 3.469 3.372e-03 0.106 -1.720 TMLHE trimethyllysine hydroxylase, epsilon X -154372966 AI635160 Xq28 Hs.133321 12

iron ion binding

mitochondrion

mitochondrial matrix

mitochondrial matrix

electron carrier activity

oxidoreductase activity

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

L-ascorbic acid binding

carnitine biosynthetic process

trimethyllysine dioxygenase activity

oxidation reduction

Lysine degradation

208760_at -0.898 6.956 -3.468 3.379e-03 0.106 -1.722 UBE2I ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast) 16 1299180, 1299361, 1299638 AL031714 16p13.3 Hs.302903 145

nucleotide binding

synaptonemal complex

ATP binding

nucleus

ubiquitin-dependent protein catabolic process

cell cycle

chromosome segregation

mitosis

specific transcriptional repressor activity

PML body

ligase activity

small conjugating protein ligase activity

enzyme binding

HLH domain binding

post-translational protein modification

interspecies interaction between organisms

negative regulation of transcription, DNA-dependent

regulation of protein metabolic process

cell division

Ubiquitin mediated proteolysis

231789_at 0.436 2.842 3.468 3.380e-03 0.106 -1.722 PCDHB15 protocadherin beta 15 5 140605330 AV722990 5q31 Hs.130757 8

calcium ion binding

protein binding

plasma membrane

integral to plasma membrane

cell adhesion

homophilic cell adhesion

nervous system development

 
213178_s_at 0.550 6.065 3.468 3.381e-03 0.106 -1.723 MAPK8IP3 mitogen-activated protein kinase 8 interacting protein 3 16 1696221 AB028989 16p13.3 Hs.207763 23

Golgi membrane

MAP-kinase scaffold activity

cytoplasm

vesicle-mediated transport

kinesin binding

protein kinase binding

regulation of JNK cascade

MAPK signaling pathway

202393_s_at -0.847 9.258 -3.468 3.382e-03 0.106 -1.723 KLF10 Kruppel-like factor 10 8 -103730182, -103730182 NM_005655 8q22.2 Hs.435001 26

negative regulation of transcription from RNA polymerase II promoter

skeletal system development

transcription factor activity

protein binding

intracellular

nucleus

transforming growth factor beta receptor signaling pathway

cell-cell signaling

zinc ion binding

negative regulation of cell proliferation

regulation of transcription

metal ion binding

 
223611_s_at 0.721 5.929 3.467 3.387e-03 0.106 -1.724 LNX1 ligand of numb-protein X 1 4 -54021193, -54021193 AI738919 4q12 Hs.518760 Hs.624833 22

ubiquitin-protein ligase activity

protein binding

cytoplasm

zinc ion binding

ligase activity

PDZ domain binding

protein ubiquitination during ubiquitin-dependent protein catabolic process

metal ion binding

protein homooligomerization

 
213540_at 0.592 7.653 3.467 3.388e-03 0.106 -1.725 HSD17B8 hydroxysteroid (17-beta) dehydrogenase 8 6 33280396, 4552579, 4358588 AL031228 6p21.3 Hs.415058 18

estradiol 17-beta-dehydrogenase activity

retinoid-X receptor activity

binding

cellular_component

membrane fraction

mitochondrion

mitochondrial envelope

plasma membrane

estrogen biosynthetic process

androgen metabolic process

oxidoreductase activity

thyroid hormone receptor coactivator activity

vitamin D receptor binding

retinoic acid receptor binding

thyroid hormone receptor binding

protein heterodimerization activity

testosterone 17-beta-dehydrogenase activity

oxidation reduction

Androgen and estrogen metabolism

Metabolic pathways

227326_at -0.551 6.757 -3.467 3.391e-03 0.106 -1.725 MXRA7 matrix-remodelling associated 7 17 -72187245, -72183403 BE966768 17q25.1 Hs.250723 Hs.597019 Hs.707692 4

membrane

integral to membrane

 
222604_at -0.438 6.655 -3.466 3.392e-03 0.106 -1.726 GTF3C3 general transcription factor IIIC, polypeptide 3, 102kDa 2 -197337344 AI608833 2q33.1 Hs.470996 10

transcription factor TFIIIC complex

DNA binding

RNA polymerase III transcription factor activity

binding

nucleus

transcription, DNA-dependent

5S class rRNA transcription

tRNA transcription from RNA polymerase III promoter

 
218154_at 0.296 6.445 3.466 3.394e-03 0.106 -1.726 GSDMD gasdermin D 8 144711634 NM_024736 8q24.3 Hs.118983 8

cellular response to extracellular stimulus

 
201137_s_at 0.854 8.249 3.466 3.395e-03 0.106 -1.727 HLA-DPB1 major histocompatibility complex, class II, DP beta 1 6 33151737, 4424266, 4230157 NM_002121 6p21.3 Hs.485130 221

antigen processing and presentation of peptide or polysaccharide antigen via MHC class II

plasma membrane

immune response

membrane

integral to membrane

MHC class II protein complex

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

211991_s_at 0.803 6.611 3.465 3.400e-03 0.106 -1.728 HLA-DPA1 major histocompatibility complex, class II, DP alpha 1 6 -33140771, -4413300, -4219191 M27487 6p21.3 Hs.347270 71

antigen processing and presentation of peptide or polysaccharide antigen via MHC class II

plasma membrane

integral to plasma membrane

immune response

MHC class II receptor activity

MHC class II protein complex

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

213316_at 0.643 5.321 3.464 3.411e-03 0.106 -1.731 KIAA1462 KIAA1462 10 -30343389 AL050154 10p11.23 Hs.533953 4    
236034_at 0.465 4.602 3.463 3.416e-03 0.106 -1.732 ANGPT2 angiopoietin 2 8 -6344580 AA083514 8p23.1 Hs.583870 137

angiogenesis

receptor binding

extracellular region

extracellular space

signal transduction

multicellular organismal development

cell differentiation

 
235677_at -0.590 5.910 -3.461 3.427e-03 0.106 -1.735 SRR serine racemase 17 2153997 BE857570 17p13 Hs.461954 22

calcium ion binding

protein binding

ATP binding

cellular amino acid metabolic process

L-serine metabolic process

metabolic process

glycine binding

isomerase activity

racemase and epimerase activity, acting on amino acids and derivatives

threonine racemase activity

pyridoxal phosphate binding

serine racemase activity

protein homodimerization activity

protein homotetramerization

D-serine biosynthetic process

Glycine, serine and threonine metabolism

213353_at -0.580 7.885 -3.461 3.428e-03 0.106 -1.736 ABCA5 ATP-binding cassette, sub-family A (ABC1), member 5 17 -64752170, -64752170 BF693921 17q24.3 Hs.421474 11

nucleotide binding

ATP binding

lysosome

endosome

Golgi apparatus

transport

membrane

integral to membrane

ATPase activity

ABC transporters

225825_at -0.772 7.426 -3.461 3.432e-03 0.106 -1.736 C20orf194 chromosome 20 open reading frame 194 20 -3177947 AL110249 20p13 Hs.516853 7    
205052_at 0.478 8.373 3.460 3.435e-03 0.106 -1.737 AUH AU RNA binding protein/enoyl-Coenzyme A hydratase 9 -93015917 NM_001698 9q22.31 Hs.175905 16

RNA binding

mRNA 3'-UTR binding

enoyl-CoA hydratase activity

methylglutaconyl-CoA hydratase activity

mitochondrion

mRNA catabolic process

metabolic process

branched chain family amino acid catabolic process

lyase activity

Valine, leucine and isoleucine degradation

Metabolic pathways

223461_at 0.600 6.889 3.460 3.435e-03 0.106 -1.737 TBC1D7 TBC1 domain family, member 7 6 -13413164 AF151073 6p24.1 Hs.484678 9

GTPase activator activity

Rab GTPase activator activity

intracellular

regulation of Rab GTPase activity

 
212530_at -0.475 9.438 -3.458 3.450e-03 0.107 -1.741 NEK7 NIMA (never in mitosis gene a)-related kinase 7 1 196392730 AL080111 1q31.3 Hs.24119 7

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

transferase activity

 
210613_s_at -0.345 7.987 -3.458 3.453e-03 0.107 -1.742 SYNGR1 synaptogyrin 1 22 38075899, 38075899, 38090120 BC000731 22q13.1 Hs.216226 13

integral to plasma membrane

membrane

cell junction

melanosome

synapse

 
208323_s_at -0.347 3.803 -3.457 3.456e-03 0.107 -1.743 ANXA13 annexin A13 8 -124762214 NM_004306 8q24.13 Hs.181107 9

calcium ion binding

calcium-dependent phospholipid binding

plasma membrane

cell differentiation

 
217887_s_at -0.706 8.481 -3.457 3.457e-03 0.107 -1.743 EPS15 epidermal growth factor receptor pathway substrate 15 1 -51592523, -51592522 NM_001981 1p32 Hs.83722 63

calcium ion binding

protein binding

cytoplasm

endosome

cytosol

plasma membrane

coated pit

epidermal growth factor receptor signaling pathway

cell proliferation

protein transport

vesicle organization

SH3 domain binding

Endocytosis

204744_s_at 0.598 9.932 3.457 3.460e-03 0.107 -1.744 IARS isoleucyl-tRNA synthetase 9 -94012445, -94012445 NM_013417 9q21 Hs.445403 13

nucleotide binding

isoleucine-tRNA ligase activity

ATP binding

soluble fraction

cytoplasm

isoleucyl-tRNA aminoacylation

zinc ion binding

ligase activity

Valine, leucine and isoleucine biosynthesis

Aminoacyl-tRNA biosynthesis

228189_at -0.472 6.760 -3.457 3.460e-03 0.107 -1.744 BAG4 BCL2-associated athanogene 4 8 38153262 T32429 8p11.23 Hs.194726 14

receptor signaling protein activity

protein binding

cytoplasm

protein folding

apoptosis

anti-apoptosis

 
203955_at 0.317 6.375 3.457 3.461e-03 0.107 -1.744 KIAA0649 KIAA0649 9 137511468 NM_014811 9q34.3 Hs.533260 6

nucleus

nucleolus

 
215379_x_at 0.716 6.110 3.456 3.463e-03 0.107 -1.745 IGL@ immunoglobulin lambda locus 22   AV698647 22q11.1-q11.2 Hs.449585 Hs.561078 20    
202815_s_at -0.524 6.944 -3.456 3.465e-03 0.107 -1.745 HEXIM1 hexamethylene bis-acetamide inducible 1 17 40580466 NM_006460 17q21.31 Hs.586945 Hs.634944 Hs.716487 28

negative regulation of transcription from RNA polymerase II promoter

cyclin-dependent protein kinase inhibitor activity

protein binding

nucleus

cytoplasm

heart development

specific transcriptional repressor activity

snRNA binding

regulation of transcription

negative regulation of cyclin-dependent protein kinase activity

 
228748_at -0.662 6.728 -3.456 3.468e-03 0.107 -1.746 CD59 CD59 molecule, complement regulatory protein 11 -33681131, -33681131, -33681131 AI653117 11p13 Hs.278573 Hs.709466 Hs.710641 107

protein binding

extracellular region

membrane fraction

plasma membrane

cell surface receptor linked signal transduction

blood coagulation

anchored to membrane

anchored to external side of plasma membrane

Complement and coagulation cascades

Hematopoietic cell lineage

226433_at -1.034 7.026 -3.456 3.468e-03 0.107 -1.746 RNF157 ring finger protein 157 17 -71650128 BF056204 17q25.1 Hs.500643 3

protein binding

zinc ion binding

metal ion binding

 
230195_at 1.327 10.927 3.455 3.476e-03 0.107 -1.748 LOC100131138 similar to hCG2040918 12   BF672169 12q24.11 Hs.152129      
218642_s_at 0.430 7.636 3.454 3.481e-03 0.107 -1.750 CHCHD7 coiled-coil-helix-coiled-coil-helix domain containing 7 8 57286868 NM_024300 8q12.1 Hs.436913 9    
218918_at 0.353 5.636 3.452 3.492e-03 0.107 -1.753 MAN1C1 mannosidase, alpha, class 1C, member 1 1 25816545 NM_020379 1p35 Hs.197043 26

mannosyl-oligosaccharide 1,2-alpha-mannosidase activity

calcium ion binding

Golgi apparatus

protein amino acid N-linked glycosylation

metabolic process

membrane

integral to membrane

hydrolase activity, acting on glycosyl bonds

integral to Golgi membrane

N-Glycan biosynthesis

Metabolic pathways

200071_at -0.624 8.339 -3.452 3.496e-03 0.107 -1.754 SMNDC1 survival motor neuron domain containing 1 10 -112042787 BF224259 10q23 Hs.632093 12

spliceosome assembly

RNA binding

protein binding

nucleus

spliceosomal complex

cytoplasm

mRNA processing

apoptosis

induction of apoptosis

RNA splicing

Cajal body

nuclear speck

RNA splicing factor activity, transesterification mechanism

 
205988_at 0.319 4.907 3.450 3.506e-03 0.107 -1.756 CD84 CD84 molecule 1 -158782410 NM_003874 1q24 Hs.398093 23

receptor activity

protein binding

plasma membrane

integral to plasma membrane

defense response

cell adhesion

homophilic cell adhesion

 
236302_at 2.375 3.500 3.449 3.516e-03 0.108 -1.759 PPM1E protein phosphatase 1E (PP2C domain containing) 17 54188230 R40892 17q22 Hs.245044 5

magnesium ion binding

protein serine/threonine phosphatase activity

nucleus

nucleolus

cytoplasm

protein amino acid dephosphorylation

protein serine/threonine phosphatase complex

hydrolase activity

manganese ion binding

 
201931_at 0.378 10.721 3.449 3.519e-03 0.108 -1.760 ETFA electron-transfer-flavoprotein, alpha polypeptide 15 -74295683 NM_000126 15q23-q25 Hs.39925 18

mitochondrion

mitochondrial matrix

transport

electron carrier activity

oxidoreductase activity

electron transport chain

FAD binding

 
211985_s_at -0.519 10.126 -3.449 3.520e-03 0.108 -1.760 CALM1 calmodulin 1 (phosphorylase kinase, delta) 14 89933125 AI653730 14q24-q31 Hs.282410 Hs.708270 181  

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Glioma

212118_at 0.316 6.819 3.447 3.529e-03 0.108 -1.762 TRIM27 tripartite motif-containing 27 6 -28978757, -330309, -128126 AL523814 6p22 Hs.440382 27

negative regulation of transcription from RNA polymerase II promoter

DNA binding

transmembrane receptor protein tyrosine kinase activity

protein binding

intracellular

membrane fraction

nucleus

nucleoplasm

cytoplasm

integral to plasma membrane

spermatogenesis

zinc ion binding

cell proliferation

nuclear membrane

regulation of transcription

negative regulation of gene expression, epigenetic

metal ion binding

protein trimerization

 
216973_s_at 0.536 5.099 3.446 3.536e-03 0.108 -1.764 HOXB7 homeobox B7 17 -44039593 S49765 17q21.3 Hs.436181 39

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anterior/posterior pattern formation

myeloid cell differentiation

sequence-specific DNA binding

embryonic skeletal system morphogenesis

 
239192_at 0.299 3.399 3.446 3.539e-03 0.108 -1.765 PARD3B par-3 partitioning defective 3 homolog B (C. elegans) 2 205118760 BF434006 2q33.3 Hs.657382 11

protein binding

tight junction

cell cycle

membrane

cell junction

cell division

 
201124_at 0.366 5.461 3.445 3.546e-03 0.108 -1.767 ITGB5 integrin, beta 5 3 -125964484 AL048423 3q21.2 Hs.536663 55

receptor activity

protein binding

cell adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

integrin complex

membrane

integral to membrane

Focal adhesion

ECM-receptor interaction

Regulation of actin cytoskeleton

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

219468_s_at -0.494 6.081 -3.444 3.550e-03 0.108 -1.768 CUEDC1 CUE domain containing 1 17 -53295335 NM_017949 17q23.2 Hs.46679 4    
227498_at -1.034 7.987 -3.444 3.551e-03 0.108 -1.768 SOX6 SRY (sex determining region Y)-box 6 11 -15944571, -15944571, -15944571 AI480314 11p15.3 Hs.368226 24

transcription factor activity

nucleus

chromatin organization

regulation of transcription, DNA-dependent

multicellular organismal development

muscle organ development

 
218706_s_at 0.714 5.188 3.444 3.555e-03 0.108 -1.769 GRAMD3 GRAM domain containing 3 5 125723686, 125786767, 125828685 AW575493 5q23.2 Hs.363558 6    
1562484_at -0.552 3.393 -3.444 3.555e-03 0.108 -1.769 FLJ35848 hypothetical protein FLJ35848 17 40089507 BC041481 17q21.31 Hs.349758 2    
214937_x_at -0.433 8.865 -3.443 3.557e-03 0.108 -1.770 PCM1 pericentriolar material 1 8 17824645 AI924817 8p22-p21.3 Hs.491148 36

pericentriolar material

protein binding

cytoplasm

cytoskeleton

nonmotile primary cilium

centriolar satellite

cilium assembly

cilium assembly

centrosome organization

 
1569171_a_at 0.310 4.857 3.443 3.558e-03 0.108 -1.770 FXR1 fragile X mental retardation, autosomal homolog 1 3 182113145 BC034416 3q28 Hs.478407 30

RNA binding

nucleolus

cytoplasm

polysome

apoptosis

multicellular organismal development

muscle organ development

cell differentiation

 
1567014_s_at -0.475 5.957 -3.443 3.564e-03 0.108 -1.771 NFE2L2 nuclear factor (erythroid-derived 2)-like 2 2 -177803279, -177803278 AF323119 2q31 Hs.715540 141

transcription factor activity

nucleus

cytoplasm

cytosol

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

sequence-specific DNA binding

protein dimerization activity

 
219263_at -0.686 6.831 -3.442 3.569e-03 0.108 -1.773 RNF128 ring finger protein 128 X 105823723, 105856549 NM_024539 Xq22.3 Hs.496542 13

protein binding

cytoplasm

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

metal ion binding

perinuclear region of cytoplasm

 
203855_at -0.728 8.107 -3.441 3.573e-03 0.108 -1.774 WDR47 WD repeat domain 47 1 -109314359 NM_014969 1p13.3 Hs.654760 8    
202234_s_at -0.648 7.965 -3.441 3.577e-03 0.108 -1.775 SLC16A1 solute carrier family 16, member 1 (monocarboxylic acid transporter 1) 1 -113255992 BF511091 1p12 Hs.75231 43

protein binding

membrane fraction

plasma membrane

transport

mevalonate transmembrane transporter activity

symporter activity

secondary active monocarboxylate transmembrane transporter activity

organic anion transport

mevalonate transport

integral to membrane

 
242648_at -0.603 7.952 -3.440 3.578e-03 0.108 -1.775 KLHL8 kelch-like 8 (Drosophila) 4 -88301237 BE858995 4q22.1 Hs.106601 Hs.715202 9

protein binding

 
222472_at -0.487 6.899 -3.440 3.582e-03 0.108 -1.776 AFTPH aftiphilin 2 64604968 BF055271 2p14 Hs.655167 12

cytoplasm

cytosol

protein transport

AP-1 adaptor complex

clathrin binding

 
201957_at -0.478 8.875 -3.439 3.586e-03 0.108 -1.777 PPP1R12B protein phosphatase 1, regulatory (inhibitor) subunit 12B 1 200584458, 200698493 AF324888 1q32.1 Hs.444403 14

cytoplasm

regulation of muscle contraction

signal transduction

enzyme activator activity

Vascular smooth muscle contraction

209163_at 0.480 4.914 3.439 3.588e-03 0.108 -1.778 CYB561 cytochrome b-561 17 -58863396, -58863396, -58863396 AL514271 17q11-qter Hs.355264 12

ferric-chelate reductase activity

cytochrome-b5 reductase activity

iron ion binding

nucleolus

plasma membrane

integral to plasma membrane

transport

electron transport chain

metal ion binding

 
232004_at -0.463 6.054 -3.439 3.592e-03 0.108 -1.779 HNRNPR heterogeneous nuclear ribonucleoprotein R 1 -23508862 AK001846 1p36.12 Hs.373763 17

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

nucleoplasm

spliceosomal complex

RNA splicing

heterogeneous nuclear ribonucleoprotein complex

 
203471_s_at 0.455 4.429 3.437 3.604e-03 0.109 -1.782 PLEK pleckstrin 2 68445825 NM_002664 2p14-p13.3 Hs.468840 23

hemopoietic progenitor cell differentiation

protein kinase C binding

protein binding

membrane fraction

soluble fraction

cytoplasm

vesicle docking during exocytosis

integrin-mediated signaling pathway

intracellular signaling cascade

positive regulation of platelet activation

negative regulation of inositol phosphate biosynthetic process

positive regulation of inositol-polyphosphate 5-phosphatase activity

phosphoinositide metabolic process

positive regulation of actin filament depolymerization

inhibition of phospholipase C activity involved in G-protein coupled receptor signaling pathway

cortical actin cytoskeleton organization

ruffle organization

actin cytoskeleton reorganization

positive regulation of actin filament bundle formation

ruffle membrane

positive regulation of integrin activation

protein homodimerization activity

phosphatidylinositol-3,4-bisphosphate binding

negative regulation of calcium-mediated signaling

regulation of cell diameter

thrombin receptor signaling pathway

platelet aggregation

protein kinase C signaling cascade

protein secretion by platelet

 
225639_at 0.870 6.745 3.437 3.606e-03 0.109 -1.782 SKAP2 src kinase associated phosphoprotein 2 7 -26673212 N21390 7p21-p15 Hs.200770 Hs.644804 19

SH3/SH2 adaptor activity

cytoplasm

plasma membrane

protein complex assembly

signal transduction

negative regulation of cell proliferation

B cell activation

 
220018_at -0.718 4.402 -3.436 3.612e-03 0.109 -1.784 CBLL1 Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1 7 107171514 NM_024814 7q22.3-q31.1 Hs.592271 9

protein binding

intracellular

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
201162_at 0.763 9.979 3.435 3.620e-03 0.109 -1.786 IGFBP7 insulin-like growth factor binding protein 7 4 -57592000 NM_001553 4q12 Hs.479808 Hs.711065 39

regulation of cell growth

insulin-like growth factor binding

extracellular region

cell adhesion

negative regulation of cell proliferation

 
203863_at -0.700 11.034 -3.434 3.626e-03 0.109 -1.787 ACTN2 actinin, alpha 2 1 234916392 W63731 1q42-q43 Hs.498178 57

actin binding

integrin binding

calcium ion binding

nucleolus

cytoplasm

cytoskeleton

actin filament

focal adhesion

muscle contraction

cell adhesion

structural constituent of muscle

Z disc

microspike assembly

filopodium

thyroid hormone receptor coactivator activity

pseudopodium

titin binding

identical protein binding

regulation of apoptosis

dendritic spine

protein dimerization activity

focal adhesion formation

protein homotetramerization

ZASP binding

FATZ 1 binding

titin Z domain binding

Focal adhesion

Adherens junction

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Systemic lupus erythematosus

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

229327_s_at -0.852 7.139 -3.434 3.626e-03 0.109 -1.788 MAF v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) 16 -78185246 BE674528 16q22-q23 Hs.134859 37

chromatin

cytokine production

transcription factor activity

RNA polymerase II transcription factor activity

protein binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

regulation of chondrocyte differentiation

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

cell development

lens fiber cell differentiation

 
206377_at 0.427 3.734 3.433 3.636e-03 0.109 -1.790 FOXF2 forkhead box F2 6 1335067 NM_001452 6p25.3 Hs.484423 7

transcription factor activity

protein binding

nucleus

transcription factor complex

transcription activator activity

extracellular matrix organization

establishment of polarity of embryonic epithelium

sequence-specific DNA binding

negative regulation of transcription, DNA-dependent

positive regulation of transcription, DNA-dependent

embryonic gut development

 
206158_s_at -0.416 11.893 -3.431 3.646e-03 0.109 -1.792 CNBP CCHC-type zinc finger, nucleic acid binding protein 3 -130369347 NM_003418 3q21 Hs.518249 24

transcription factor activity

protein binding

cytoplasm

endoplasmic reticulum

regulation of transcription, DNA-dependent

cholesterol biosynthetic process

zinc ion binding

metal ion binding

 
225429_at -0.761 8.456 -3.430 3.653e-03 0.110 -1.794 PPP6C protein phosphatase 6, catalytic subunit 9 -126948672 BF437011 9q33.3 Hs.715605 16

G1/S transition of mitotic cell cycle

protein serine/threonine phosphatase activity

iron ion binding

protein binding

cytoplasm

cytosol

protein amino acid dephosphorylation

cell cycle

hydrolase activity

manganese ion binding

metal ion binding

 
222825_at -0.702 6.919 -3.430 3.654e-03 0.110 -1.795 OTUD6B OTU domain containing 6B 8 92151599 BF435752 8q21.3 Hs.30532 4    
204117_at -0.397 8.773 -3.430 3.658e-03 0.110 -1.796 PREP prolyl endopeptidase 6 -105832198 NM_002726 6q22 Hs.436564 26

serine-type endopeptidase activity

cytoplasm

proteolysis

peptidase activity

 
205591_at -0.466 6.013 -3.429 3.661e-03 0.110 -1.796 OLFM1 olfactomedin 1 9 137106909, 137106923 NM_006334 9q34.3 Hs.522484 9

protein binding

endoplasmic reticulum

endoplasmic reticulum lumen

multicellular organismal development

nervous system development

membrane

 
218788_s_at 0.482 6.379 3.429 3.663e-03 0.110 -1.797 SMYD3 SET and MYND domain containing 3 1 -243979266 NM_022743 1q44 Hs.567571 18

protein binding

nucleus

cytoplasm

methyltransferase activity

zinc ion binding

chromatin modification

transferase activity

histone-lysine N-methyltransferase activity

metal ion binding

 
203706_s_at -0.899 7.914 -3.428 3.669e-03 0.110 -1.798 FZD7 frizzled homolog 7 (Drosophila) 2 202607554 NM_003507 2q33 Hs.173859 23

non-G-protein coupled 7TM receptor activity

G-protein coupled receptor activity

plasma membrane

G-protein coupled receptor protein signaling pathway

multicellular organismal development

integral to membrane

Wnt receptor signaling pathway

Wnt receptor activity

Wnt signaling pathway

Melanogenesis

Pathways in cancer

Colorectal cancer

Basal cell carcinoma

226968_at -0.494 10.187 -3.428 3.670e-03 0.110 -1.799 KIF1B kinesin family member 1B 1 10193350, 10193350 AK023184 1p36.2 Hs.97858 33

nucleotide binding

microtubule motor activity

protein binding

ATP binding

cytoplasm

mitochondrion

cytoskeleton

microtubule

microtubule associated complex

microtubule-based movement

nerve-nerve synaptic transmission

neuromuscular synaptic transmission

anterograde axon cargo transport

ATPase activity

kinesin binding

cytoplasmic vesicle membrane

cytoskeleton-dependent intracellular transport

cytoplasmic vesicle

 
225733_at 0.302 5.786 3.428 3.670e-03 0.110 -1.799 B3GALT6 UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6 1 1157491 AI890557 1p36.33 Hs.284284 4

Golgi apparatus

Golgi medial cisterna

glycosaminoglycan biosynthetic process

protein amino acid glycosylation

UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity

membrane

integral to membrane

transferase activity, transferring glycosyl groups

manganese ion binding

galactosylxylosylprotein 3-beta-galactosyltransferase activity

Chondroitin sulfate biosynthesis

Heparan sulfate biosynthesis

Metabolic pathways

238454_at 0.769 4.467 3.428 3.672e-03 0.110 -1.799 ZNF540 zinc finger protein 540 19 42734147 AA013398 19q13.12 Hs.121283 5

DNA binding

intracellular

nucleus

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
202462_s_at -0.401 8.113 -3.427 3.683e-03 0.110 -1.802 DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 5 134122359 NM_014829 5q31.1 Hs.406549 9

nucleotide binding

RNA binding

helicase activity

ATP binding

nucleus

mRNA processing

ATP-dependent helicase activity

RNA splicing

Cajal body

nuclear speck

hydrolase activity

 
200056_s_at -0.557 8.583 -3.426 3.684e-03 0.110 -1.802 C1D C1D nuclear receptor co-repressor 2 -68122835 NM_006333 2p13-p12 Hs.602900 Hs.697447 12

exosome (RNase complex)

DNA binding

transcription corepressor activity

RNA binding

protein binding

nucleus

nucleolus

cytoplasm

rRNA processing

apoptosis

negative regulation of transcription

ligand-dependent nuclear receptor binding

transcriptional repressor complex

RNA degradation

203920_at 0.447 5.158 3.426 3.687e-03 0.110 -1.803 NR1H3 nuclear receptor subfamily 1, group H, member 3 11 47227024, 47236072 NM_005693 11p11.2 Hs.438863 Hs.513522 94

transcription factor activity

steroid hormone receptor activity

transcription coactivator activity

thyroid hormone receptor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

positive regulation of specific transcription from RNA polymerase II promoter

negative regulation of foam cell differentiation

positive regulation of triglyceride biosynthetic process

positive regulation of cholesterol efflux

negative regulation of cholesterol storage

positive regulation of cellular protein metabolic process

negative regulation of lipid transport

sequence-specific DNA binding

positive regulation of fatty acid biosynthetic process

metal ion binding

negative regulation of pinocytosis

positive regulation of lipoprotein lipase activity

PPAR signaling pathway

208317_at 0.292 2.261 3.426 3.690e-03 0.110 -1.804 XYLB xylulokinase homolog (H. influenzae) 3 38363254 NM_005108 3p22-p21.3 Hs.659985 4

nucleotide binding

xylulokinase activity

ATP binding

carbohydrate metabolic process

generation of precursor metabolites and energy

kinase activity

transferase activity

D-xylose metabolic process

Pentose and glucuronate interconversions

Metabolic pathways

218756_s_at 0.635 6.561 3.426 3.690e-03 0.110 -1.804 DHRS11 dehydrogenase/reductase (SDR family) member 11 17 32022338 NM_024308 17q12 Hs.462859 5

binding

extracellular region

oxidoreductase activity

oxidation reduction

 
227822_at 0.485 6.406 3.425 3.694e-03 0.110 -1.805 ZNF605 zinc finger protein 605 12 -132008119 AI341321 12q24.33 Hs.29698 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
214921_at 0.410 3.365 3.425 3.697e-03 0.110 -1.805 KCNMA1 potassium large conductance calcium-activated channel, subfamily M, alpha member 1 10 -78314641, -78299364 U02632 10q22.3 Hs.144795 89

magnesium ion binding

response to hypoxia

actin binding

catalytic activity

voltage-gated ion channel activity

voltage-gated potassium channel activity

calcium ion binding

protein binding

caveola

ion transport

potassium ion transport

response to osmotic stress

synaptic transmission

sensory perception of sound

circadian rhythm

adult walking behavior

voltage-gated potassium channel complex

metabolic process

external side of plasma membrane

integral to membrane

apical plasma membrane

regulation of action potential in neuron

cellular potassium ion homeostasis

potassium ion binding

regulation of aldosterone metabolic process

response to carbon monoxide

response to carbon monoxide

regulation of membrane potential

auditory receptor cell differentiation

positive regulation of apoptosis

terminal button

postsynaptic membrane

locomotor rhythm

negative regulation of cell volume

saliva secretion

cell maturation

neuromuscular process controlling balance

response to calcium ion

large conductance calcium-activated potassium channel activity

eye blink reflex

smooth muscle contraction involved in micturition

relaxation of vascular smooth muscle

Vascular smooth muscle contraction

225819_at -0.468 5.926 -3.424 3.701e-03 0.110 -1.806 TBRG1 transforming growth factor beta regulator 1 11 123997951 AA576946 11q24.2 Hs.436410 11

DNA binding

protein binding

nucleus

DNA replication

cell cycle

cell cycle arrest

negative regulation of cell proliferation

nucleolus to nucleoplasm transport

protein stabilization

 
203405_at -0.495 6.521 -3.423 3.710e-03 0.110 -1.809 PSMG1 proteasome (prosome, macropain) assembly chaperone 1 21 -39469253 NM_003720 21q22.3 Hs.473838 12

protein binding

cytoplasm

endoplasmic reticulum

proteasome assembly

 
209568_s_at 0.524 6.717 3.423 3.712e-03 0.110 -1.809 RGL1 ral guanine nucleotide dissociation stimulator-like 1 1 181871830 AF186779 1q25.3 Hs.497148 6

guanyl-nucleotide exchange factor activity

protein binding

cellular_component

intracellular

signal transduction

Ral guanyl-nucleotide exchange factor activity

regulation of small GTPase mediated signal transduction

 
203476_at 0.489 6.002 3.422 3.716e-03 0.110 -1.810 TPBG trophoblast glycoprotein 6 83130257 NM_006670 6q14-q15 Hs.82128 16

protein binding

cytoplasm

endoplasmic reticulum

integral to plasma membrane

cell adhesion

membrane

 
202718_at 0.640 5.719 3.422 3.720e-03 0.110 -1.811 IGFBP2 insulin-like growth factor binding protein 2, 36kDa 2 217206371 NM_000597 2q33-q34 Hs.438102 95

regulation of cell growth

extracellular region

extracellular space

signal transduction

insulin-like growth factor I binding

insulin-like growth factor II binding

regulation of insulin-like growth factor receptor signaling pathway

regulation of insulin-like growth factor receptor signaling pathway

 
213664_at 0.553 5.020 3.421 3.722e-03 0.110 -1.812 SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 9 4480443 AW235061 9p24 Hs.444915 43

L-glutamate transmembrane transporter activity

membrane fraction

integral to plasma membrane

transport

dicarboxylic acid transport

synaptic transmission

symporter activity

membrane

sodium:dicarboxylate symporter activity

L-glutamate import

D-aspartate import

 
215559_at -1.118 5.747 -3.421 3.723e-03 0.110 -1.812 ABCC6 ATP-binding cassette, sub-family C (CFTR/MRP), member 6 16 -16222544, -16150922 AI074459 16p13.1 Hs.442182 70

nucleotide binding

transporter activity

ATP binding

plasma membrane

transport

visual perception

integral to membrane

ATPase activity

response to drug

ATPase activity, coupled to transmembrane movement of substances

response to stimulus

ABC transporters

217880_at -0.443 6.727 -3.421 3.725e-03 0.110 -1.812 CDC27 cell division cycle 27 homolog (S. cerevisiae) 17 -42550309 N21397 17q12-q23.2 Hs.463295 53

protein binding

nucleus

nucleoplasm

cytoplasm

centrosome

cytosol

spindle microtubule

mitotic metaphase/anaphase transition

cell proliferation

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

226874_at -0.619 7.650 -3.421 3.726e-03 0.110 -1.813 KLHL8 kelch-like 8 (Drosophila) 4 -88301237 BF591270 4q22.1 Hs.106601 Hs.715202 9

protein binding

 
231260_at 0.404 3.911 3.421 3.729e-03 0.110 -1.813 BC036928 hypothetical protein BC036928 19   AW162207 19q13.43 Hs.549564 1    
226515_at -0.417 8.030 -3.419 3.743e-03 0.111 -1.817 CCDC127 coiled-coil domain containing 127 5 -257874 AL577758 5p15.33 Hs.294145 4    
213026_at -0.378 7.658 -3.417 3.753e-03 0.111 -1.819 ATG12 ATG12 autophagy related 12 homolog (S. cerevisiae) 5 -115193714 BE965998 5q21-q22 Hs.264482 17

autophagic vacuole formation

protein binding

cytoplasm

autophagy

modification-dependent protein catabolic process

pre-autophagosomal structure membrane

intracellular membrane-bounded organelle

Regulation of autophagy

RIG-I-like receptor signaling pathway

235907_at -0.310 4.953 -3.417 3.755e-03 0.111 -1.820 TMEM33 transmembrane protein 33 4 41631893 BE245080 4p13 Hs.31082 5

protein binding

biological_process

membrane

integral to membrane

melanosome

 
230029_x_at -0.478 11.072 -3.417 3.756e-03 0.111 -1.820 UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 2 170392263 AI708334 2q31.1 Hs.379548 7

suckling behavior

ubiquitin-protein ligase activity

ubiquitin-dependent protein catabolic process

sensory perception of smell

zinc ion binding

embryonic development

membrane

integral to membrane

ligase activity

metal ion binding

 
202098_s_at 0.383 6.417 3.416 3.765e-03 0.111 -1.822 PRMT2 protein arginine methyltransferase 2 21 46879954 NM_001535 21q22.3 Hs.154163 17

signal transducer activity

nucleus

protein amino acid methylation

signal transduction

methyltransferase activity

transferase activity

identical protein binding

 
218577_at -0.448 7.135 -3.416 3.767e-03 0.111 -1.823 LRRC40 leucine rich repeat containing 40 1 -70383084 NM_017768 1p31.1 Hs.147836 6

protein binding

 
1569348_at -0.571 4.238 -3.415 3.773e-03 0.111 -1.824 psiTPTE22 TPTE pseudogene 22 15462800 BC017420 22q11.1 Hs.474116 4    
206256_at -0.266 4.596 -3.414 3.778e-03 0.111 -1.826 CPN1 carboxypeptidase N, polypeptide 1 10 -101792054 NM_001308 10q24.2 Hs.2246 16

metallocarboxypeptidase activity

extracellular region

extracellular space

proteolysis

peptidase activity

metallopeptidase activity

zinc ion binding

metal ion binding

 
208076_at 0.361 3.011 3.414 3.778e-03 0.111 -1.826 HIST1H4D histone cluster 1, H4d 6 -26296916 NM_003539 6p21.3 Hs.248179 10  

Systemic lupus erythematosus

45714_at -1.078 9.104 -3.414 3.779e-03 0.111 -1.826 HCFC1R1 host cell factor C1 regulator 1 (XPO1 dependent) 16 -3012626 AA436930 16p13.3 Hs.719259 2

nucleus

cytoplasm

 
213819_s_at -0.271 5.071 -3.414 3.780e-03 0.111 -1.826 FLOT1 flotillin 1 6 -30803489, -2144083, -1942389 H45696 6p21.3 Hs.179986 36

protein binding

Golgi apparatus

microtubule organizing center

plasma membrane

integral to membrane

flotillin complex

centriolar satellite

melanosome

Insulin signaling pathway

202749_at -0.539 8.821 -3.414 3.781e-03 0.111 -1.826 WRB tryptophan rich basic protein 21 39674082, 39681561 NM_004627 21q22.3 Hs.198308 7

nucleus

nucleolus

membrane

integral to membrane

 
221889_at 0.321 4.909 3.413 3.789e-03 0.111 -1.828 KCTD13 potassium channel tetramerisation domain containing 13 16 -29825161 AW026481 16p11.2 Hs.534590 9

voltage-gated potassium channel activity

nucleus

DNA replication

potassium ion transport

voltage-gated potassium channel complex

membrane

identical protein binding

 
201135_at 0.429 10.281 3.413 3.789e-03 0.111 -1.828 ECHS1 enoyl Coenzyme A hydratase, short chain, 1, mitochondrial 10 -135025976 NM_004092 10q26.2-q26.3 Hs.76394 16

enoyl-CoA hydratase activity

enoyl-CoA hydratase activity

protein binding

mitochondrion

mitochondrial matrix

mitochondrial matrix

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

metabolic process

lyase activity

Fatty acid elongation in mitochondria

Fatty acid metabolism

Valine, leucine and isoleucine degradation

Lysine degradation

Tryptophan metabolism

beta-Alanine metabolism

Benzoate degradation via CoA ligation

Propanoate metabolism

Butanoate metabolism

Limonene and pinene degradation

Caprolactam degradation

Metabolic pathways

203312_x_at -0.465 6.797 -3.412 3.793e-03 0.111 -1.829 ARF6 ADP-ribosylation factor 6 14 49429485 NM_001663 14q21.3 Hs.525330 Hs.682124 86

nucleotide binding

ruffle

liver development

GTPase activity

protein binding

GTP binding

intracellular

membrane fraction

cytoplasm

endosome

Golgi apparatus

plasma membrane

cell cortex

apoptosis

cell motion

cell adhesion

small GTPase mediated signal transduction

protein transport

vesicle-mediated transport

positive regulation of actin filament polymerization

cortical actin cytoskeleton organization

ruffle organization

regulation of Rac protein signal transduction

negative regulation of receptor-mediated endocytosis

Endocytosis

Fc gamma R-mediated phagocytosis

211755_s_at 0.386 12.136 3.412 3.797e-03 0.111 -1.830 ATP5F1 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1 1 111793265 BC005960 1p13.2 Hs.514870 15

mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)

transporter activity

protein binding

mitochondrion

mitochondrial matrix

ion transport

hydrogen ion transmembrane transporter activity

ATP synthesis coupled proton transport

proton transport

membrane

ATPase activity

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

1568644_at 0.293 2.618 3.411 3.801e-03 0.111 -1.831 ZNF208 zinc finger protein 208 19 -21940736 BC038199 19p12 Hs.541334 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
228967_at -0.874 8.160 -3.411 3.801e-03 0.111 -1.831 EIF1 eukaryotic translation initiation factor 1 17 37098652 BE964053 17q21.2 Hs.150580 10

translation initiation factor activity

cytoplasm

regulation of translational initiation

response to stress

 
231530_s_at 0.748 6.457 3.411 3.803e-03 0.111 -1.832 C11orf1 chromosome 11 open reading frame 1 11 111255157 BG150085 11q13-q22 Hs.17546 5

molecular_function

nucleus

biological_process

 
218311_at -0.523 7.417 -3.411 3.805e-03 0.111 -1.832 MAP4K3 mitogen-activated protein kinase kinase kinase kinase 3 2 -39329925 NM_003618 2p22.1 Hs.655750 7

nucleotide binding

protein serine/threonine kinase activity

small GTPase regulator activity

protein binding

ATP binding

protein amino acid phosphorylation

response to stress

protein kinase cascade

JNK cascade

transferase activity

MAPK signaling pathway

219213_at 0.461 6.066 3.409 3.815e-03 0.111 -1.834 JAM2 junctional adhesion molecule 2 21 25933459 NM_021219 21q21.2 Hs.517227 21

plasma membrane

plasma membrane

integral to plasma membrane

tight junction

cell-cell adhesion

cell junction

Cell adhesion molecules (CAMs)

Tight junction

Leukocyte transendothelial migration

Epithelial cell signaling in Helicobacter pylori infection

202842_s_at -0.450 8.301 -3.409 3.818e-03 0.111 -1.835 DNAJB9 DnaJ (Hsp40) homolog, subfamily B, member 9 7 107997591 AL080081 14q24.2-q24.3 7q31 Hs.6790 16

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

protein folding

heat shock protein binding

unfolded protein binding

 
221087_s_at 0.473 6.180 3.409 3.818e-03 0.111 -1.835 APOL3 apolipoprotein L, 3 22 -34866317, -34866317 NM_014349 22q13.1 Hs.474737 11

signal transducer activity

lipid transporter activity

extracellular region

cytoplasm

lipid transport

inflammatory response

lipid binding

lipoprotein metabolic process

positive regulation of I-kappaB kinase/NF-kappaB cascade

 
206695_x_at 0.651 3.798 3.409 3.822e-03 0.111 -1.836 ZNF43 zinc finger protein 43 19 -21779591 NM_003423 19p13.1-p12 Hs.534365 13

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1558041_a_at 0.354 5.030 3.408 3.824e-03 0.111 -1.837 KIAA0895L KIAA0895-like 16 -65767005 AL834156 16q22.1 Hs.651201 2    
229614_at 0.514 4.892 3.408 3.826e-03 0.111 -1.837 ZNF320 zinc finger protein 320 19 -58071236 AI277652 19q13.41 Hs.446907 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
200941_at -0.454 7.861 -3.407 3.834e-03 0.111 -1.839 HSBP1 heat shock factor binding protein 1 16 82399093 AK026575 16q23.3 Hs.250899 Hs.705549 8

negative regulation of transcription from RNA polymerase II promoter

transcription corepressor activity

nucleus

 
219072_at 0.334 7.336 3.407 3.835e-03 0.111 -1.839 BCL7C B-cell CLL/lymphoma 7C 16 -30806616 NM_004765 16p11 Hs.658547 9

apoptosis

 
217403_s_at 0.333 3.202 3.404 3.855e-03 0.112 -1.844 ZNF227 zinc finger protein 227 19 49408530 AC074331   Hs.371335 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
203912_s_at -0.440 9.011 -3.403 3.867e-03 0.112 -1.847 DNASE1L1 deoxyribonuclease I-like 1 X -153282772, -153282772 NM_006730 Xq28 Hs.401929 14

DNA binding

endonuclease activity

deoxyribonuclease activity

endoplasmic reticulum

DNA catabolic process

hydrolase activity

 
1563483_at -0.530 4.036 -3.402 3.871e-03 0.112 -1.848 FAM91A2 family with sequence similarity 91, member A2 1   AB007962 1q21.1 Hs.710717 3    
229539_at 0.297 5.420 3.402 3.874e-03 0.112 -1.849 ABCB8 ATP-binding cassette, sub-family B (MDR/TAP), member 8 7 150356442 AW665395 7q36 Hs.647118 12

nucleotide binding

transporter activity

ATP binding

membrane fraction

mitochondrion

mitochondrial envelope

mitochondrial inner membrane

transport

membrane

integral to membrane

ATPase activity

ATPase activity, coupled to transmembrane movement of substances

ATP-binding cassette (ABC) transporter complex

ABC transporters

201040_at 0.419 6.118 3.402 3.875e-03 0.112 -1.849 GNAI2 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 3 50248650 NM_002070 3p21 Hs.77269 85

nucleotide binding

activation of MAPKK activity

adenosine receptor signaling pathway

GTPase activity

signal transducer activity

protein binding

GTP binding

membrane fraction

nucleus

cytosol

plasma membrane

signal transduction

inhibition of adenylate cyclase activity by G-protein signaling

muscarinic acetylcholine receptor signaling pathway

gamma-aminobutyric acid signaling pathway

protein kinase cascade

response to nutrient

positive regulation of cell proliferation

guanyl nucleotide binding

membrane raft

negative regulation of synaptic transmission

negative regulation of calcium ion transport via voltage-gated calcium channel activity

Chemokine signaling pathway

Axon guidance

Tight junction

Gap junction

Leukocyte transendothelial migration

Long-term depression

Melanogenesis

224677_x_at -0.311 8.682 -3.401 3.879e-03 0.112 -1.850 C11orf31 chromosome 11 open reading frame 31 11 57265297 AV729234 11q12.1 Hs.655373 Hs.719147 6

selenium binding

cell redox homeostasis

 
244655_at 0.552 4.113 3.401 3.879e-03 0.112 -1.850 LOC100132798 similar to hCG1774772 15   W68045 15q26.2        
1558759_s_at -0.549 5.702 -3.401 3.879e-03 0.112 -1.850 CLASP2 cytoplasmic linker associated protein 2 3 -33512741 AA310888 3p22.3 Hs.108614 17

condensed chromosome kinetochore

protein binding

cytoplasm

Golgi apparatus

centrosome

spindle

kinetochore microtubule

cytoskeleton

cytoplasmic microtubule

cell cortex

negative regulation of microtubule depolymerization

cell cycle

mitosis

establishment or maintenance of cell polarity

galactoside 2-alpha-L-fucosyltransferase activity

regulation of microtubule polymerization or depolymerization

microtubule plus-end binding

cell division

 
205450_at -0.956 8.175 -3.401 3.883e-03 0.112 -1.851 PHKA1 phosphorylase kinase, alpha 1 (muscle) X -71715388 NM_002637 Xq12-q13 Hs.201379 12

catalytic activity

phosphorylase kinase activity

calmodulin binding

cytoplasm

plasma membrane

carbohydrate metabolic process

glycogen metabolic process

generation of precursor metabolites and energy

intracellular membrane-bounded organelle

Calcium signaling pathway

Insulin signaling pathway

201701_s_at -0.564 6.694 -3.401 3.886e-03 0.112 -1.852 PGRMC2 progesterone receptor membrane component 2 4 -129410746 NM_006320 4q26 Hs.507910 9

steroid hormone receptor activity

receptor activity

steroid binding

protein binding

membrane

integral to membrane

heme binding

 
217788_s_at -0.432 8.078 -3.400 3.892e-03 0.112 -1.853 GALNT2 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2) 1 228269578 NM_004481 1q41-q42 Hs.716384 24

immunoglobulin biosynthetic process

polypeptide N-acetylgalactosaminyltransferase activity

calcium ion binding

sugar binding

extracellular region

Golgi apparatus

Golgi stack

membrane

integral to membrane

transferase activity, transferring glycosyl groups

protein amino acid O-linked glycosylation via serine

protein amino acid O-linked glycosylation via threonine

manganese ion binding

integral to Golgi membrane

perinuclear region of cytoplasm

O-Glycan biosynthesis

Metabolic pathways

222785_x_at 0.838 6.359 3.399 3.902e-03 0.112 -1.855 C11orf1 chromosome 11 open reading frame 1 11 111255157 AJ250229 11q13-q22 Hs.17546 5

molecular_function

nucleus

biological_process

 
235604_x_at 0.538 4.708 3.398 3.907e-03 0.112 -1.856 ZNF493 zinc finger protein 493 19 21371760, 21371760 AI758697 19p12 Hs.656558 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
214209_s_at 0.315 4.153 3.398 3.910e-03 0.113 -1.857 ABCB9 ATP-binding cassette, sub-family B (MDR/TAP), member 9 12 -121979491, -121979491 BE504895 12q24 Hs.511951 20

nucleotide binding

transporter activity

ATP binding

lysosome

endoplasmic reticulum

spermatogenesis

protein transport

peptide transport

membrane

integral to membrane

ATPase activity

ATPase activity, coupled to transmembrane movement of substances

ATP-binding cassette (ABC) transporter complex

ABC transporters

Lysosome

221926_s_at 0.387 5.445 3.395 3.930e-03 0.113 -1.862 IL17RC interleukin 17 receptor C 3 9933763 BF196320 3p25.3 3p25.3-p24.1 Hs.129959 14

receptor activity

plasma membrane

integral to membrane

 
213380_x_at 0.333 5.443 3.394 3.937e-03 0.113 -1.864 MSTP9 macrophage stimulating, pseudogene 9 1 -16953988 AA911235 1p36.13 Hs.349110 Hs.655432 2

serine-type endopeptidase activity

extracellular region

proteolysis

peptidase activity

 
222405_at 0.260 6.985 3.394 3.938e-03 0.113 -1.864 PTPLAD1 protein tyrosine phosphatase-like A domain containing 1 15 63609879 AL573951 15q22.2 Hs.512973 13

molecular_function

GTPase activator activity

protein binding

cellular_component

I-kappaB kinase/NF-kappaB cascade

activation of JUN kinase activity

small GTPase mediated signal transduction

Rho protein signal transduction

membrane

integral to membrane

Rac protein signal transduction

 
AFFX-HUMGAPDH/M33197_3_at -0.268 13.587 -3.391 3.960e-03 0.114 -1.869 GAPDH glyceraldehyde-3-phosphate dehydrogenase 12 6513917 AFFX-HUMGAPDH/M33197_3 12p13 Hs.544577 Hs.592355 Hs.598320 130

glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity

protein binding

cytoplasm

glucose metabolic process

glycolysis

membrane

oxidoreductase activity

perinuclear region of cytoplasm

NAD or NADH binding

oxidation reduction

Glycolysis / Gluconeogenesis

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

Alzheimer's disease

208924_at -0.403 9.892 -3.391 3.964e-03 0.114 -1.870 RNF11 ring finger protein 11 1 51474532 AB024703 1pter-p22.1 Hs.309641 17

ubiquitin ligase complex

DNA binding

protein binding

nucleus

cytoplasm

zinc ion binding

protein ubiquitination during ubiquitin-dependent protein catabolic process

metal ion binding

 
226541_at -0.448 6.966 -3.390 3.968e-03 0.114 -1.871 FBXO30 F-box protein 30 6 -146160964 AI808182 6q24 Hs.421095 8

zinc ion binding

modification-dependent protein catabolic process

metal ion binding

 
228622_s_at 0.358 7.183 3.390 3.973e-03 0.114 -1.872 DNAJC4 DnaJ (Hsp40) homolog, subfamily C, member 4 11 63754328 AW071239 11q13 Hs.172847 4

membrane fraction

protein folding

response to unfolded protein

membrane

integral to membrane

heat shock protein binding

unfolded protein binding

 
213181_s_at 0.398 5.203 3.389 3.976e-03 0.114 -1.873 MOCS1 molybdenum cofactor synthesis 1 6 -39980023, -39980023 AL583528 6p21.3 Hs.718492 19

nucleotide binding

catalytic activity

iron ion binding

GTP binding

nucleus

Mo-molybdopterin cofactor biosynthetic process

Mo-molybdopterin cofactor biosynthetic process

metabolic process

molybdopterin synthase complex

molybdenum ion binding

metal ion binding

4 iron, 4 sulfur cluster binding

 
227874_at 0.491 7.601 3.389 3.980e-03 0.114 -1.874 EMCN endomucin 4 -101535522 AI635774 4q24 Hs.152913 12

extracellular region

plasma membrane

integral to membrane

 
211966_at 0.550 5.799 3.389 3.983e-03 0.114 -1.874 COL4A2 collagen, type IV, alpha 2 13 109757631 AA909035 13q34 Hs.508716 54

extracellular matrix structural constituent

binding

extracellular region

collagen

collagen type IV

negative regulation of angiogenesis

extracellular matrix organization

Focal adhesion

ECM-receptor interaction

Pathways in cancer

Small cell lung cancer

215000_s_at -0.709 9.974 -3.388 3.988e-03 0.114 -1.875 FEZ2 fasciculation and elongation protein zeta 2 (zygin II) 2 -36632904 AL117593 2p21 Hs.258563 9

protein binding

signal transduction

nervous system development

axon guidance

 
219866_at -0.658 9.310 -3.388 3.988e-03 0.114 -1.876 CLIC5 chloride intracellular channel 5 6 -45974165, -45974165 NM_016929 6p21.1-p12.1 Hs.485489 15

voltage-gated ion channel activity

voltage-gated chloride channel activity

protein binding

insoluble fraction

cytoplasm

Golgi apparatus

centrosome

cell cortex

ion transport

chloride transport

female pregnancy

actin cytoskeleton

membrane

integral to membrane

chloride ion binding

chloride channel complex

 
1552316_a_at 0.595 5.203 3.387 3.996e-03 0.114 -1.877 GIMAP1 GTPase, IMAP family member 1 7 150044630 NM_130759 7q36.1 Hs.647087 7

GTP binding

endoplasmic reticulum

membrane

integral to membrane

 
222963_s_at 0.415 4.017 3.387 3.998e-03 0.114 -1.878 IL1RAPL1 interleukin 1 receptor accessory protein-like 1 X 28515601 AF284435 Xp22.1-p21.3 Hs.658912 18

transmembrane receptor activity

signal transduction

learning or memory

membrane

integral to membrane

innate immune response

 
202038_at -0.465 8.304 -3.387 3.998e-03 0.114 -1.878 UBE4A ubiquitination factor E4A (UFD2 homolog, yeast) 11 117735511 NM_004788 11q23.3 Hs.602967 Hs.75275 12

ubiquitin ligase complex

protein polyubiquitination

protein binding

cytoplasm

ubiquitin-dependent protein catabolic process

ubiquitin-ubiquitin ligase activity

Ubiquitin mediated proteolysis

1568718_at -0.348 5.908 -3.387 4.000e-03 0.114 -1.878 SLC22A23 solute carrier family 22, member 23 6 -3214206, -3214206 BC038748 6p25.2 Hs.713588 7

transporter activity

ion transport

membrane

integral to membrane

 
204204_at -0.584 6.238 -3.386 4.006e-03 0.114 -1.880 SLC31A2 solute carrier family 31 (copper transporters), member 2 9 114953058 NM_001860 9q31-q32 Hs.24030 7

copper ion transmembrane transporter activity

copper ion binding

integral to plasma membrane

ion transport

copper ion transport

membrane

 
200748_s_at 0.464 12.251 3.385 4.009e-03 0.114 -1.880 FTH1 ferritin, heavy polypeptide 1 11 -61488332 NM_002032 11q13 Hs.524910 Hs.645560 55

ferroxidase activity

protein binding

iron ion transport

intracellular sequestering of iron ion

immune response

intracellular ferritin complex

ferric iron binding

negative regulation of cell proliferation

oxidoreductase activity

oxidation reduction

Porphyrin and chlorophyll metabolism

204071_s_at -0.647 6.440 -3.385 4.011e-03 0.114 -1.881 TOPORS topoisomerase I binding, arginine/serine-rich 9 -32530541 NM_005802 9p21 Hs.589962 Hs.711159 30

DNA binding

antigen binding

protein binding

nucleus

apoptosis

response to DNA damage stimulus

visual perception

zinc ion binding

nuclear speck

ligase activity

DNA topoisomerase I binding

modification-dependent protein catabolic process

regulation of cell proliferation

positive regulation of transcription

metal ion binding

response to stimulus

maintenance of protein location in nucleus

 
212875_s_at 0.407 5.785 3.384 4.020e-03 0.114 -1.883 C2CD2 C2 calcium-dependent domain containing 2 21 -42178287, -42178287 AP001745 21q22.3 Hs.473894 Hs.675058 4

extracellular region

nucleus

cytosol

 
234982_at -0.699 10.083 -3.383 4.026e-03 0.114 -1.884 UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 2 170392263 BF577193 2q31.1 Hs.379548 7

suckling behavior

ubiquitin-protein ligase activity

ubiquitin-dependent protein catabolic process

sensory perception of smell

zinc ion binding

embryonic development

membrane

integral to membrane

ligase activity

metal ion binding

 
219751_at -0.478 5.538 -3.383 4.033e-03 0.114 -1.886 SETD6 SET domain containing 6 16 57106883 NM_024860 16q21 Hs.592060 5    
205986_at 0.339 5.830 3.382 4.034e-03 0.114 -1.886 AATK apoptosis-associated tyrosine kinase 17 -76705690 NM_004920 17q25.3 Hs.514575 15

nucleotide binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

cytoplasm

mitochondrion

protein amino acid phosphorylation

membrane

integral to membrane

transferase activity

perinuclear region of cytoplasm

 
218649_x_at -0.666 8.146 -3.382 4.037e-03 0.114 -1.887 SDCCAG1 serologically defined colon cancer antigen 1 14 -49320281 NM_004713 14q22 Hs.655964 8

nucleus

cytoplasm

 
203633_at 0.621 7.024 3.382 4.037e-03 0.114 -1.887 CPT1A carnitine palmitoyltransferase 1A (liver) 11 -68278926, -68278663 BF001714 11q13.1-q13.2 Hs.503043 32

carnitine O-palmitoyltransferase activity

mitochondrion

mitochondrial outer membrane

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

transport

acyltransferase activity

membrane

integral to membrane

transferase activity

Fatty acid metabolism

PPAR signaling pathway

Adipocytokine signaling pathway

203721_s_at -0.683 7.769 -3.381 4.045e-03 0.115 -1.889 UTP18 UTP18, small subunit (SSU) processome component, homolog (yeast) 17 46692895 NM_016001 17q21.33 Hs.709327 11

nucleus

nucleolus

small nucleolar ribonucleoprotein complex

rRNA processing

 
1554863_s_at -0.511 7.602 -3.381 4.048e-03 0.115 -1.889 DOK5 docking protein 5 20 52525672 BC008992 20q13.2 Hs.656582 10

MAPKKK cascade

transmembrane receptor protein tyrosine kinase signaling protein activity

insulin receptor binding

transmembrane receptor protein tyrosine kinase signaling pathway

nervous system development

 
211747_s_at -0.402 8.655 -3.380 4.051e-03 0.115 -1.890 LSM5 LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) 7 -32491469, -32491469, -32491469 BC005938 7p14.3 Hs.424908 13

RNA binding

protein binding

nucleus

mRNA processing

RNA splicing

ribonucleoprotein complex

RNA degradation

204174_at 0.371 5.442 3.380 4.056e-03 0.115 -1.891 ALOX5AP arachidonate 5-lipoxygenase-activating protein 13 30207668 NM_001629 13q12 Hs.507658 73

nucleus

endoplasmic reticulum

enzyme activator activity

membrane

integral to membrane

leukotriene biosynthetic process

nuclear membrane

protein N-terminus binding

arachidonic acid binding

protein homotrimerization

 
244180_at 0.343 5.480 3.380 4.058e-03 0.115 -1.892 ZNF793 zinc finger protein 793 19 42689680 AI039201 19q13.12 Hs.568010 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
218484_at 0.447 6.248 3.379 4.059e-03 0.115 -1.892 NDUFA4L2 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2 12 -55914952 NM_020142 12q13.3 Hs.75069 5  

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

223583_at 0.365 5.061 3.379 4.060e-03 0.115 -1.892 TNFAIP8L2 tumor necrosis factor, alpha-induced protein 8-like 2 1 149395728 AF271774 1q21.3 Hs.709522 2

protein binding

innate immune response

 
210170_at -1.081 9.678 -3.377 4.079e-03 0.115 -1.896 PDLIM3 PDZ and LIM domain 3 4 -186659844 BC001017 4q35 Hs.85862 12

nucleus

nucleolus

cytoplasm

actin filament organization

heart development

cytoskeletal protein binding

zinc ion binding

structural constituent of muscle

actin cytoskeleton

Z disc

metal ion binding

 
218438_s_at -0.504 7.314 -3.376 4.088e-03 0.115 -1.898 MED28 mediator complex subunit 28 4 17225370 NM_025205 4p16 Hs.434075 Hs.644788 14

actin binding

protein binding

nucleus

cytoplasm

membrane

regulation of transcription

 
214380_at 0.372 4.985 3.376 4.089e-03 0.115 -1.899 PRPF31 PRP31 pre-mRNA processing factor 31 homolog (S. cerevisiae) 19 59310601 AI334332 19q13.42 Hs.515598 44

assembly of spliceosomal tri-snRNP

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

spliceosomal complex

RNA splicing

Cajal body

nuclear speck

ribonucleoprotein binding

U4/U6 x U5 tri-snRNP complex

 
207120_at 0.417 3.186 3.375 4.094e-03 0.115 -1.900 ZNF667 zinc finger protein 667 19 -61643017 NM_022103 19q13.43 Hs.712574 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
226025_at -0.670 8.430 -3.375 4.096e-03 0.115 -1.900 ANKRD28 ankyrin repeat domain 28 3 -15683747 AV740426 3p25.1 Hs.335239 10

protein binding

nucleus

nucleoplasm

 
200618_at 0.402 6.755 3.374 4.101e-03 0.115 -1.901 LASP1 LIM and SH3 protein 1 17 34279637 NM_006148 17q11-q21.3 Hs.548018 22

SH3/SH2 adaptor activity

protein binding

cytoplasm

cytoskeleton

plasma membrane

focal adhesion

cell cortex

ion transport

zinc ion binding

ion transmembrane transporter activity

cortical actin cytoskeleton

cortical cytoskeleton organization

metal ion binding

actin filament binding

 
200804_at -0.421 9.253 -3.374 4.106e-03 0.115 -1.903 TMBIM6 transmembrane BAX inhibitor motif containing 6 12 48421559, 48421858 NM_003217 12q12-q13 Hs.35052 Hs.708025 20

insoluble fraction

nucleus

endoplasmic reticulum

integral to plasma membrane

spermatogenesis

membrane

negative regulation of apoptosis

 
223681_s_at -0.954 8.420 -3.373 4.112e-03 0.116 -1.904 INADL InaD-like (Drosophila) 1 61980736 AB044807 1p31.3 Hs.478125 24

protein binding

cellular_component

plasma membrane

tight junction

intracellular signaling cascade

apical plasma membrane

cell junction

Tight junction

203571_s_at 0.562 7.577 3.373 4.114e-03 0.116 -1.904 C10orf116 chromosome 10 open reading frame 116 10 88718167 NM_006829 10q23.2 Hs.642660 Hs.714477 4

molecular_function

cellular_component

biological_process

 
222410_s_at -0.519 8.633 -3.373 4.116e-03 0.116 -1.905 SNX6 sorting nexin 6 14 -34100368, -34100368 AF121856 14q13.1 Hs.583855 7

protein binding

intracellular

cytoplasm

intracellular protein transport

cell communication

negative regulation of epidermal growth factor receptor activity

negative regulation of transcription

negative regulation of transforming growth factor beta receptor signaling pathway

phosphoinositide binding

protein homodimerization activity

 
204446_s_at 0.433 3.702 3.372 4.118e-03 0.116 -1.905 ALOX5 arachidonate 5-lipoxygenase 10 45189634 NM_000698 10q11.2 Hs.89499 141

arachidonate 5-lipoxygenase activity

iron ion binding

calcium ion binding

protein binding

nucleus

nuclear envelope lumen

cytoplasm

cytosol

inflammatory response

membrane

lipoxygenase activity

nuclear matrix

oxidoreductase activity

leukotriene biosynthetic process

nuclear membrane

oxidation reduction

Arachidonic acid metabolism

Linoleic acid metabolism

Metabolic pathways

210076_x_at -0.331 9.140 -3.372 4.120e-03 0.116 -1.906 SERBP1 SERPINE1 mRNA binding protein 1 1 -67646080 AF151813 1p31 Hs.719078 22

RNA binding

mRNA 3'-UTR binding

protein binding

nucleus

cytoplasm

regulation of mRNA stability

perinuclear region of cytoplasm

 
210045_at -0.434 8.326 -3.371 4.129e-03 0.116 -1.908 IDH2 isocitrate dehydrogenase 2 (NADP+), mitochondrial 15 -88428215 AU151428 15q26.1 Hs.596461 20

magnesium ion binding

isocitrate dehydrogenase (NADP+) activity

mitochondrion

carbohydrate metabolic process

glyoxylate cycle

tricarboxylic acid cycle

isocitrate metabolic process

oxidoreductase activity

oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

manganese ion binding

NAD or NADH binding

oxidation reduction

Citrate cycle (TCA cycle)

Glutathione metabolism

Reductive carboxylate cycle (CO2 fixation)

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

222798_at 0.672 7.204 3.371 4.131e-03 0.116 -1.908 PTER phosphotriesterase related 10 16518972 BF112019 10p12 Hs.444321 Hs.716660 6

zinc ion binding

catabolic process

hydrolase activity, acting on ester bonds

metal ion binding

 
227466_at 0.463 7.725 3.371 4.133e-03 0.116 -1.909 LOC285550 hypothetical protein LOC285550 4 15292449 BF108695 4p15.32 Hs.399980 Hs.619367 3    
216867_s_at -0.422 5.932 -3.371 4.133e-03 0.116 -1.909 PDGFA platelet-derived growth factor alpha polypeptide 7 -503424 X03795 7p22 Hs.535898 79

cell activation

platelet-derived growth factor receptor binding

platelet-derived growth factor receptor binding

collagen binding

extracellular region

extracellular region

extracellular space

cell-cell signaling

growth factor activity

embryonic development

cell surface

negative regulation of phosphatidylinositol biosynthetic process

negative regulation of platelet activation

regulation of smooth muscle cell migration

membrane

positive regulation of cell migration

platelet dense granule lumen

regulation of actin cytoskeleton organization

wound healing

protein homodimerization activity

cell surface binding

positive regulation of DNA replication

protein heterodimerization activity

platelet-derived growth factor receptor signaling pathway

positive regulation of fibroblast proliferation

platelet-derived growth factor binding

negative chemotaxis

MAPK signaling pathway

Cytokine-cytokine receptor interaction

Focal adhesion

Gap junction

Regulation of actin cytoskeleton

Pathways in cancer

Glioma

Prostate cancer

Melanoma

201649_at 0.507 6.531 3.370 4.139e-03 0.116 -1.910 UBE2L6 ubiquitin-conjugating enzyme E2L 6 11 -57075704, -57075704 NM_004223 11q12 Hs.425777 19

ubiquitin-protein ligase activity

protein binding

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

Parkinson's disease

206342_x_at -0.461 6.047 -3.370 4.140e-03 0.116 -1.910 IDS iduronate 2-sulfatase X -148376566, -148368202 NM_006123 Xq28 Hs.460960 73

iduronate-2-sulfatase activity

calcium ion binding

lysosome

metabolic process

hydrolase activity

glycosaminoglycan metabolic process

Glycosaminoglycan degradation

Metabolic pathways

Lysosome

204661_at 0.440 5.109 3.369 4.144e-03 0.116 -1.911 CD52 CD52 molecule 1 26516997 NM_001803 1p36 Hs.276770 27

membrane fraction

plasma membrane

integral to plasma membrane

elevation of cytosolic calcium ion concentration

anchored to membrane

respiratory burst

 
234003_at 0.335 4.419 3.369 4.145e-03 0.116 -1.911 ENOX2 ecto-NOX disulfide-thiol exchanger 2 X -129585037 AL133115 Xq25-q26.2 Hs.171458 22

nucleotide binding

nucleic acid binding

copper ion binding

extracellular region

extracellular space

nucleus

cytoplasm

cytosol

cytoskeleton

plasma membrane

transport

ultradian rhythm

external side of plasma membrane

protein disulfide oxidoreductase activity

cell growth

oxidoreductase activity

electron transport chain

regulation of growth

 
201686_x_at -0.307 5.513 -3.369 4.151e-03 0.116 -1.913 API5 apoptosis inhibitor 5 11 43290080 AF229254 11p11.2 Hs.435771 15

binding

nucleus

spliceosomal complex

cytoplasm

apoptosis

anti-apoptosis

anti-apoptosis

anti-apoptosis

fibroblast growth factor binding

 
228746_s_at -0.608 8.292 -3.369 4.151e-03 0.116 -1.913 CDV3 CDV3 homolog (mouse) 3 134775123, 134775990 AV646549 3q22.1 Hs.518265 11

molecular_function

cellular_component

cytoplasm

cell proliferation

 
222423_at -0.352 7.461 -3.368 4.158e-03 0.116 -1.914 NDFIP1 Nedd4 family interacting protein 1 5 141468507 H05010 5q31.3 Hs.653510 Hs.9788 11

signal transducer activity

protein binding

Golgi apparatus

cellular iron ion homeostasis

negative regulation of gene expression

membrane

integral to membrane

positive regulation of protein ubiquitination

negative regulation of transporter activity

positive regulation of I-kappaB kinase/NF-kappaB cascade

perinuclear region of cytoplasm

negative regulation of protein transport

 
204294_at 0.371 7.196 3.368 4.160e-03 0.116 -1.915 AMT aminomethyltransferase 3 -49429214 NM_000481 3p21.2-p21.1 Hs.102 17

aminomethyltransferase activity

cytoplasm

mitochondrion

glycine catabolic process

transaminase activity

transferase activity

Glycine, serine and threonine metabolism

One carbon pool by folate

Nitrogen metabolism

Metabolic pathways

235177_at -0.694 5.384 -3.366 4.176e-03 0.116 -1.918 FAM119A family with sequence similarity 119, member A 2 -208182083, -208182083 AI625022 2q33.3 Hs.664764 2

membrane

integral to membrane

 
215596_s_at -0.485 7.886 -3.365 4.181e-03 0.116 -1.919 RNF160 ring finger protein 160 21 -29222336 AL163248 21q22.11 Hs.288773 4

protein binding

zinc ion binding

metal ion binding

 
221898_at -0.516 6.126 -3.364 4.188e-03 0.116 -1.921 PDPN podoplanin 1 13782838, 13784553 AU154455 1p36.21 Hs.468675 48

cell morphogenesis

ruffle

lymphangiogenesis

plasma membrane

integral to plasma membrane

prostaglandin metabolic process

water transport

cell cycle

signal transduction

multicellular organismal development

cell proliferation

regulation of cell shape

folic acid transporter activity

amino acid transmembrane transporter activity

water channel activity

folic acid transport

cell-cell adhesion

lamellipodium

filopodium

positive regulation of cell migration

tube morphogenesis

lung alveolus development

 
225069_at -0.479 8.085 -3.364 4.191e-03 0.116 -1.922 PCYT1A phosphate cytidylyltransferase 1, choline, alpha 3 -197449649 BF063382 3q29 Hs.435767 15

choline-phosphate cytidylyltransferase activity

soluble fraction

cytoplasm

endoplasmic reticulum membrane

cytosol

phosphatidylcholine biosynthetic process

phospholipid biosynthetic process

biosynthetic process

response to abiotic stimulus

membrane

transferase activity

nucleotidyltransferase activity

glycogen granule

Aminophosphonate metabolism

Glycerophospholipid metabolism

Metabolic pathways

219144_at -0.719 9.919 -3.363 4.196e-03 0.117 -1.923 DUSP26 dual specificity phosphatase 26 (putative) 8 -33568392 NM_024025 8p12 Hs.8719 6

protein tyrosine phosphatase activity

nucleus

cytoplasm

Golgi apparatus

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

 
202578_s_at -0.416 6.202 -3.363 4.200e-03 0.117 -1.923 DDX19A DEAD (Asp-Glu-Ala-As) box polypeptide 19A 16 68938324 NM_018332 16q22.1 Hs.656037 5

nucleotide binding

RNA binding

helicase activity

ATP binding

nucleus

nuclear pore

cytoplasm

ATP-dependent helicase activity

protein transport

membrane

hydrolase activity

mRNA transport

intracellular protein transmembrane transport

 
202130_at -0.361 9.842 -3.362 4.207e-03 0.117 -1.925 RIOK3 RIO kinase 3 (yeast) 18 19286784 AA725102 18q11.2 Hs.445511 Hs.719109 9

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

chromosome segregation

kinase activity

transferase activity

 
218504_at 0.468 8.390 3.362 4.209e-03 0.117 -1.925 FAHD2A fumarylacetoacetate hydrolase domain containing 2A 2 95432174 NM_016044 2p24.3-p11.2 Hs.546387 4

magnesium ion binding

calcium ion binding

metabolic process

hydrolase activity

 
205472_s_at 0.593 4.213 3.362 4.209e-03 0.117 -1.926 DACH1 dachshund homolog 1 (Drosophila) 13 -70910098 NM_004392 13q22 Hs.129452 24

nucleotide binding

transcription factor activity

protein binding

nucleus

transcription factor complex

cytoplasm

multicellular organismal development

regulation of transcription

 
204689_at 0.505 4.675 3.362 4.210e-03 0.117 -1.926 HHEX hematopoietically expressed homeobox 10 94439660 NM_001529 10q23.33 Hs.118651 86

liver development

transcription factor activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

mRNA export from nucleus

cell cycle

multicellular organismal development

transcription factor binding

eukaryotic initiation factor 4E binding

organ morphogenesis

anterior/posterior pattern formation

positive regulation of specific transcription from RNA polymerase II promoter

negative regulation of specific transcription from RNA polymerase II promoter

negative regulation of angiogenesis

transcription repressor activity

cell differentiation

positive regulation of Wnt receptor signaling pathway

thyroid gland development

forebrain development

negative regulation of vascular endothelial growth factor receptor signaling pathway

embryonic heart tube development

regulation of cell proliferation

sequence-specific DNA binding

Maturity onset diabetes of the young

220721_at 0.320 4.428 3.360 4.227e-03 0.117 -1.929 ZNF614 zinc finger protein 614 19 -57208389 NM_025040 19q13.41 Hs.292336 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
210296_s_at -0.423 8.183 -3.359 4.230e-03 0.117 -1.930 PXMP3 peroxisomal membrane protein 3, 35kDa 8 -78055048 BC005375 8q21.1 Hs.437966 Hs.703022 19

neuron migration

protein binding

peroxisome

peroxisomal membrane

integral to peroxisomal membrane

peroxisome organization

nervous system development

zinc ion binding

membrane

integral to membrane

metal ion binding

 
226976_at -0.425 7.837 -3.359 4.232e-03 0.117 -1.930 KPNA6 karyopherin alpha 6 (importin alpha 7) 1 32346230 D55880 1p35.1-p34.3 Hs.470588 Hs.711019 53

protein binding

nucleus

nuclear pore

cytoplasm

NLS-bearing substrate import into nucleus

intracellular protein transport

protein transporter activity

 
203957_at -0.487 6.571 -3.359 4.233e-03 0.117 -1.931 E2F6 E2F transcription factor 6 2 -11501951 NM_001952 2p25.1 Hs.603093 24

regulation of transcription of G1/S-phase of mitotic cell cycle

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

transcription corepressor activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

cell cycle

 
218185_s_at -0.531 7.440 -3.359 4.237e-03 0.117 -1.932 ARMC1 armadillo repeat containing 1 8 -66677627 NM_018120 8q13.1 Hs.269542 3

binding

metal ion transport

metal ion binding

 
226005_at -0.850 8.974 -3.359 4.237e-03 0.117 -1.932 UBE2G1 ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast) 17 -4119260 BG170762 17p13.2 1q42 Hs.714345 12

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ubiquitin-dependent protein catabolic process

ligase activity

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

Parkinson's disease

207089_at -1.436 6.766 -3.359 4.238e-03 0.117 -1.932 NRAP nebulin-related anchoring protein 10 -115338572 AF005213 10q24-q26 Hs.268788 14

actin binding

actin binding

protein binding

fascia adherens

muscle tendon junction

biological_process

zinc ion binding

metal ion binding

muscle alpha-actinin binding

 
201313_at 0.387 5.063 3.358 4.239e-03 0.117 -1.932 ENO2 enolase 2 (gamma, neuronal) 12 6893874 NM_001975 12p13 Hs.511915 41

phosphopyruvate hydratase complex

magnesium ion binding

phosphopyruvate hydratase activity

intracellular

cytoplasm

plasma membrane

glycolysis

lyase activity

perikaryon

Glycolysis / Gluconeogenesis

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

RNA degradation

226907_at -1.019 7.905 -3.358 4.241e-03 0.117 -1.932 PPP1R14C protein phosphatase 1, regulatory (inhibitor) subunit 14C 6 150505880 N32557 6q24.3-q25.3 Hs.486798 10

protein serine/threonine phosphatase inhibitor activity

protein binding

cytoplasm

membrane

regulation of phosphorylation

 
223051_at -0.332 9.444 -3.358 4.241e-03 0.117 -1.932 SSU72 SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) 1 -1466915 AF277178 1p36.33 Hs.30026 Hs.657061 7

phosphoprotein phosphatase activity

nucleus

cytoplasm

mRNA processing

hydrolase activity

 
226607_at -0.832 8.310 -3.357 4.249e-03 0.117 -1.934 C20orf194 chromosome 20 open reading frame 194 20 -3177947 AI498144 20p13 Hs.516853 7    
211622_s_at 0.529 5.882 3.357 4.251e-03 0.117 -1.935 ARF3 ADP-ribosylation factor 3 12 -47616258 M33384 12q13 Hs.119177 Hs.715625 24

nucleotide binding

GTPase activity

GTP binding

intracellular

Golgi apparatus

small GTPase mediated signal transduction

protein transport

vesicle-mediated transport

 
215921_at -0.643 4.781 -3.357 4.252e-03 0.117 -1.935 NPIPL1 nuclear pore complex interacting protein-like 1 16   AC002544 16p11.2   1

extracellular region

 
229027_at -0.963 5.002 -3.357 4.253e-03 0.117 -1.935 PPM1A protein phosphatase 1A (formerly 2C), magnesium-dependent, alpha isoform 14 59782222, 59785718, 59785718 AI241945 14q23.1 Hs.130036 28

magnesium ion binding

protein serine/threonine phosphatase activity

signal transducer activity

cellular_component

membrane fraction

voltage-gated calcium channel complex

protein amino acid dephosphorylation

protein C-terminus binding

protein serine/threonine phosphatase complex

hydrolase activity

manganese ion binding

positive regulation of Wnt receptor signaling pathway

neuron projection

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of transcription, DNA-dependent

MAPK signaling pathway

236223_s_at 0.227 2.430 3.357 4.256e-03 0.117 -1.936 RIT1 Ras-like without CAAX 1 1 -154134224 AL037450 1q22 Hs.491234 17

nucleotide binding

calmodulin binding

GTP binding

intracellular

plasma membrane

signal transduction

small GTPase mediated signal transduction

small GTPase mediated signal transduction

 
208873_s_at -0.446 9.513 -3.356 4.260e-03 0.117 -1.937 REEP5 receptor accessory protein 5 5 -112239979 BC000232 5q22-q23 Hs.429608 11

molecular_function

protein binding

biological_process

membrane

integral to membrane

 
212381_at -0.909 6.939 -3.355 4.270e-03 0.117 -1.939 USP24 ubiquitin specific peptidase 24 1 -55304619 BF444943 1p32.3 Hs.477009 13

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
214196_s_at -0.399 4.478 -3.354 4.274e-03 0.117 -1.940 TPP1 tripeptidyl peptidase I 11 -6590572 AA602532 11p15 Hs.523454 51

serine-type endopeptidase activity

protein binding

soluble fraction

mitochondrion

lysosome

lysosome

proteolysis

lipid metabolic process

lysosome organization

nervous system development

peptidase activity

tripeptidyl-peptidase activity

tripeptidyl-peptidase activity

peptide binding

melanosome

peptide catabolic process

bone resorption

neuromuscular process controlling balance

Lysosome

214787_at -0.407 3.839 -3.354 4.277e-03 0.117 -1.940 DENND4A DENN/MADD domain containing 4A 15 -63740012 BE268538 15q22.31 Hs.654567 8

DNA binding

protein binding

nucleus

regulation of transcription, DNA-dependent

 
203685_at -0.747 7.488 -3.354 4.279e-03 0.117 -1.941 BCL2 B-cell CLL/lymphoma 2 18 -59136166, -58941558 NM_000633 18q21.3 18q21.33 Hs.150749 705

G1/S transition of mitotic cell cycle

protein phosphatase type 2A complex

cell morphogenesis

response to acid

ovarian follicle development

ureteric bud development

branching involved in ureteric bud morphogenesis

behavioral fear response

response to hypoxia

B cell homeostasis

release of cytochrome c from mitochondria

regulation of cell-matrix adhesion

protease binding

lymphoid progenitor cell differentiation

B cell lineage commitment

T cell lineage commitment

immune system development

renal system process

intracellular

membrane fraction

nucleus

cytoplasm

mitochondrion

mitochondrial outer membrane

mitochondrial outer membrane

mitochondrial outer membrane

endoplasmic reticulum

endoplasmic reticulum membrane

microsome

cytosol

calcineurin complex

protein amino acid dephosphorylation

melanin metabolic process

oxygen and reactive oxygen species metabolic process

regulation of nitrogen utilization

anti-apoptosis

humoral immune response

response to oxidative stress

actin filament organization

female pregnancy

cell aging

response to nutrient

transcription factor binding

cell death

positive regulation of cell proliferation

male gonad development

activation of pro-apoptotic gene products

response to radiation

response to heat

response to external stimulus

response to toxin

post-embryonic development

organ morphogenesis

response to inorganic substance

response to iron ion

response to UV-B

response to gamma radiation

regulation of gene expression

negative regulation of calcium ion transport into cytosol

regulation of glycoprotein biosynthetic process

mesenchymal cell development

positive regulation of neuron maturation

positive regulation of smooth muscle cell migration

membrane

integral to membrane

cell-cell adhesion

transcription activator activity

peptidyl-threonine phosphorylation

cochlear nucleus development

gland morphogenesis

hemopoiesis

negative regulation of ossification

negative regulation of cell growth

negative regulation of cell migration

response to caffeine

hair follicle morphogenesis

axon regeneration

regulation of protein stability

nuclear membrane

endoplasmic reticulum calcium ion homeostasis

glomerulus development

negative regulation of cellular pH reduction

regulation of protein localization

negative regulation of myeloid cell apoptosis

T cell differentiation in the thymus

positive regulation of peptidyl-serine phosphorylation

negative regulation of osteoblast proliferation

response to cytokine stimulus

response to nicotine

organ growth

positive regulation of multicellular organism growth

B cell proliferation

response to drug

response to hydrogen peroxide

protein homodimerization activity

T cell homeostasis

positive regulation of catalytic activity

myelin sheath

CD8-positive, alpha-beta T cell lineage commitment

response to peptide hormone stimulus

regulation of protein homodimerization activity

regulation of protein heterodimerization activity

negative regulation of neuron apoptosis

ear development

response to estrogen stimulus

regulation of viral genome replication

response to ethanol

positive regulation of melanocyte differentiation

negative regulation of mitotic cell cycle

negative regulation of retinal cell programmed cell death

regulation of mitochondrial membrane permeability

protein heterodimerization activity

focal adhesion formation

positive regulation of pigmentation during development

spleen development

thymus development

gut morphogenesis

developmental growth

oocyte development

positive regulation of skeletal muscle fiber development

pigment granule organization

homeostasis of number of cells within a tissue

response to glucocorticoid stimulus

BH3 domain binding

defense response to virus

regulation of cell cycle

response to protein stimulus

regulation of mitochondrial membrane potential

negative regulation of mitochondrial depolarization

regulation of calcium ion transport

apoptosis in response to endoplasmic reticulum stress

Apoptosis

Focal adhesion

Neurotrophin signaling pathway

Amyotrophic lateral sclerosis (ALS)

Pathways in cancer

Colorectal cancer

Prostate cancer

Small cell lung cancer

221959_at -0.346 5.923 -3.353 4.284e-03 0.117 -1.942 FAM110B family with sequence similarity 110, member B 8 59069666 BE672313 8q12.1 Hs.154652 7

cytoplasm

mitochondrion

centrosome

 
218326_s_at -0.722 6.152 -3.352 4.293e-03 0.117 -1.944 LGR4 leucine-rich repeat-containing G protein-coupled receptor 4 11 -27344083 NM_018490 11p14-p13 Hs.502176 6

receptor activity

protein binding

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

integral to membrane

protein-hormone receptor activity

 
241280_at 0.290 4.639 3.352 4.294e-03 0.117 -1.944 ALDOB aldolase B, fructose-bisphosphate 9 -103222662 AV650426 9q21.3-q22.2 Hs.530274 40

fructose-bisphosphate aldolase activity

microtubule organizing center

glycolysis

NADH oxidation

cytoskeletal protein binding

metabolic process

lyase activity

fructose 1,6-bisphosphate metabolic process

positive regulation of ATPase activity

centriolar satellite

identical protein binding

ATPase binding

fructose binding

vacuolar proton-transporting V-type ATPase complex assembly

Glycolysis / Gluconeogenesis

Pentose phosphate pathway

Fructose and mannose metabolism

Carbon fixation in photosynthetic organisms

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

222494_at -0.296 9.126 -3.352 4.294e-03 0.117 -1.944 FOXN3 forkhead box N3 14 -88692268, -88692268 AW051527 14q31.3 Hs.434286 Hs.621371 16

DNA damage checkpoint

G2 phase of mitotic cell cycle

transcription factor activity

nucleus

cell cycle

protein C-terminus binding

transcription repressor activity

sequence-specific DNA binding

negative regulation of transcription, DNA-dependent

 
216008_s_at -0.358 7.424 -3.352 4.299e-03 0.117 -1.945 ARIH2 ariadne homolog 2 (Drosophila) 3 48931284 AV694434 3p21.2-p21.3 Hs.633601 14

nucleic acid binding

protein binding

nucleus

ubiquitin-dependent protein catabolic process

multicellular organismal development

zinc ion binding

metal ion binding

 
225545_at -0.973 9.032 -3.352 4.299e-03 0.117 -1.945 EEF2K eukaryotic elongation factor-2 kinase 16 22125092 BF001312 16p12.2 Hs.498892 22

nucleotide binding

protein serine/threonine kinase activity

elongation factor-2 kinase activity

calcium ion binding

calmodulin binding

ATP binding

cytoplasm

cytosol

translational elongation

protein amino acid phosphorylation

translation factor activity, nucleic acid binding

transferase activity

 
201928_at 0.266 6.967 3.351 4.302e-03 0.117 -1.946 PKP4 plakophilin 4 2 159021721 AA194254 2q23-q31 Hs.407580 27

protein binding

cell adhesion

desmosome

 
203327_at -0.440 8.398 -3.351 4.303e-03 0.117 -1.946 IDE insulin-degrading enzyme 10 -94203579 N22903 10q23-q25 Hs.500546 94

metalloendopeptidase activity

signal transducer activity

ATP binding

extracellular space

soluble fraction

cytoplasm

peroxisome

proteolysis

signal transduction

sex differentiation

peptidase activity

zinc ion binding

bradykinin catabolic process

protein homodimerization activity

metal ion binding

beta-amyloid metabolic process

Alzheimer's disease

203896_s_at 0.563 5.565 3.351 4.305e-03 0.117 -1.946 PLCB4 phospholipase C, beta 4 20 9024931 NM_000933 20p12 Hs.472101 17

phosphoinositide phospholipase C activity

signal transducer activity

calcium ion binding

protein binding

intracellular signaling cascade

lipid catabolic process

hydrolase activity

Inositol phosphate metabolism

Metabolic pathways

Calcium signaling pathway

Chemokine signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Wnt signaling pathway

Gap junction

Long-term potentiation

Long-term depression

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Huntington's disease

218773_s_at 0.293 10.273 3.350 4.311e-03 0.117 -1.948 MSRB2 methionine sulfoxide reductase B2 10 23424432 NM_012228 10p12 Hs.461420 14

protein-methionine-R-oxide reductase activity

transcription factor activity

mitochondrion

peptide-methionine-(S)-S-oxide reductase activity

zinc ion binding

oxidoreductase activity

protein repair

metal ion binding

oxidation reduction

 
207507_s_at 0.430 12.269 3.350 4.314e-03 0.117 -1.948 ATP5G3 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) 2 -175749231, -175749231 NM_001689 2q31.1 Hs.429 10

transporter activity

protein binding

mitochondrion

mitochondrial proton-transporting ATP synthase complex

ion transport

lipid binding

hydrogen ion transmembrane transporter activity

ATP synthesis coupled proton transport

proton transport

membrane

integral to membrane

proton-transporting ATP synthase complex, coupling factor F(o)

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

236094_at 0.318 4.851 3.349 4.319e-03 0.117 -1.949 TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 10 114699998 BF696202 10q25.3 Hs.593995 246

blood vessel development

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

anti-apoptosis

cell cycle arrest

beta-catenin binding

transcription factor binding

cell proliferation

positive regulation of specific transcription from RNA polymerase II promoter

positive regulation of heparan sulfate proteoglycan biosynthetic process

specific transcriptional repressor activity

protein kinase binding

pancreas development

positive regulation of insulin secretion

regulation of hormone metabolic process

glucose homeostasis

fat cell differentiation

regulation of transcription

myoblast cell fate commitment

Wnt receptor signaling pathway through beta-catenin

beta-catenin-TCF7L2 complex

Wnt signaling pathway

Adherens junction

Melanogenesis

Pathways in cancer

Colorectal cancer

Endometrial cancer

Prostate cancer

Thyroid cancer

Basal cell carcinoma

Acute myeloid leukemia

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

203935_at -0.593 7.479 -3.348 4.328e-03 0.117 -1.951 ACVR1 activin A receptor, type I 2 -158301204, -158301204 NM_001105 2q23-q24 Hs.470316 53

G1/S transition of mitotic cell cycle

nucleotide binding

magnesium ion binding

patterning of blood vessels

urogenital system development

in utero embryonic development

gastrulation with mouth forming second

mesoderm formation

neural crest cell migration

acute inflammatory response

receptor activity

ATP binding

protein amino acid phosphorylation

transforming growth factor beta receptor signaling pathway

germ cell development

determination of left/right symmetry

mesoderm development

heart development

embryonic development

membrane

activin receptor activity, type I

transferase activity

manganese ion binding

regulation of ossification

positive regulation of bone mineralization

BMP signaling pathway

negative regulation of activin receptor signaling pathway

protein homodimerization activity

negative regulation of apoptosis

apical part of cell

positive regulation of osteoblast differentiation

positive regulation of transcription

SMAD binding

activin receptor complex

follistatin binding

activin binding

regulation of skeletal muscle tissue development

transforming growth factor beta binding

smooth muscle cell differentiation

pharyngeal system development

Cytokine-cytokine receptor interaction

TGF-beta signaling pathway

227094_at 0.501 7.684 3.348 4.329e-03 0.117 -1.951 DHTKD1 dehydrogenase E1 and transketolase domain containing 1 10 12150939 AI934407 10p14 Hs.104980 Hs.711138 3

oxoglutarate dehydrogenase (succinyl-transferring) activity

mitochondrion

glycolysis

oxidoreductase activity

thiamin pyrophosphate binding

oxidation reduction

 
229272_at -0.947 5.271 -3.348 4.329e-03 0.117 -1.951 FNBP4 formin binding protein 4 11 -47694644 AI083506 11p11.2 Hs.6834 11

protein binding

 
219737_s_at -0.823 5.413 -3.348 4.332e-03 0.117 -1.952 PCDH9 protocadherin 9 13 -65774967 AI524125 13q14.3-q21.1 Hs.654709 Hs.719302 8

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

 
201858_s_at 0.500 7.654 3.348 4.335e-03 0.117 -1.953 SRGN serglycin 10 70517833 J03223 10q22.1 Hs.1908 30

protein binding

protein binding

extracellular region

extracellular space

Golgi apparatus

apoptosis

negative regulation of bone mineralization

biomineral formation

mast cell secretory granule organization

T cell secretory granule organization

maintenance of protease location in mast cell secretory granule

maintenance of granzyme B location in T cell secretory granule

mast cell granule

negative regulation of cytokine secretion

protein maturation by peptide bond cleavage

 
203373_at 0.678 4.920 3.346 4.345e-03 0.117 -1.955 SOCS2 suppressor of cytokine signaling 2 12 92487728 NM_003877 12q Hs.485572 40

regulation of cell growth

SH3/SH2 adaptor activity

growth hormone receptor binding

prolactin receptor binding

insulin-like growth factor receptor binding

protein binding

cytoplasm

anti-apoptosis

intracellular signaling cascade

JAK-STAT cascade

JAK pathway signal transduction adaptor activity

negative regulation of signal transduction

modification-dependent protein catabolic process

response to estradiol stimulus

growth hormone receptor signaling pathway

Jak-STAT signaling pathway

Insulin signaling pathway

Type II diabetes mellitus

220478_at 0.284 5.601 3.346 4.348e-03 0.117 -1.956 APOL5 apolipoprotein L, 5 22 34443864 NM_030642 22q12.3 Hs.326561 3

protein binding

extracellular region

cytoplasm

lipid metabolic process

lipid transport

high-density lipoprotein binding

lipid binding

lipoprotein metabolic process

 
204114_at 0.502 5.841 3.346 4.354e-03 0.117 -1.957 NID2 nidogen 2 (osteonidogen) 14 -51541269 NM_007361 14q21-q22 Hs.369840 15

calcium ion binding

collagen binding

extracellular region

basement membrane

cell adhesion

cell-matrix adhesion

bioluminescence

membrane

protein-chromophore linkage

 
235344_at -0.652 6.993 -3.345 4.356e-03 0.117 -1.957 PPM1A protein phosphatase 1A (formerly 2C), magnesium-dependent, alpha isoform 14 59782222, 59785718, 59785718 BG288054 14q23.1 Hs.130036 28

magnesium ion binding

protein serine/threonine phosphatase activity

signal transducer activity

cellular_component

membrane fraction

voltage-gated calcium channel complex

protein amino acid dephosphorylation

protein C-terminus binding

protein serine/threonine phosphatase complex

hydrolase activity

manganese ion binding

positive regulation of Wnt receptor signaling pathway

neuron projection

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of transcription, DNA-dependent

MAPK signaling pathway

227064_at -0.457 9.157 -3.345 4.357e-03 0.117 -1.958 ANKRD40 ankyrin repeat domain 40 17 -46125550 AV712687 17q21.33 Hs.463426 2    
219461_at 0.307 4.916 3.345 4.362e-03 0.117 -1.959 PAK6 p21 protein (Cdc42/Rac)-activated kinase 6 15 38296920, 38319326 AJ236915 15q14 Hs.513645 13

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

transferase activity

ErbB signaling pathway

Axon guidance

Focal adhesion

T cell receptor signaling pathway

Regulation of actin cytoskeleton

Renal cell carcinoma

243814_at 0.294 4.688 3.344 4.363e-03 0.117 -1.959 ZMYND8 zinc finger, MYND-type containing 8 20 -45271787 AW135141 20q13.12 Hs.446240 Hs.658553 Hs.668465 17

protein binding

zinc ion binding

metal ion binding

 
202734_at -0.436 7.090 -3.344 4.365e-03 0.117 -1.959 TRIP10 thyroid hormone receptor interactor 10 19 6690706 NM_004240 19p13.3 Hs.515094 28

cytoplasm

lysosome

Golgi apparatus

cytoskeleton

plasma membrane

cell cortex

endocytosis

signal transduction

lipid binding

actin cytoskeleton organization

identical protein binding

perinuclear region of cytoplasm

Insulin signaling pathway

226161_at -0.391 6.323 -3.344 4.369e-03 0.117 -1.960 SLC30A6 solute carrier family 30 (zinc transporter), member 6 2 32244436 BF793552 2p22.3 Hs.23248 7

Golgi apparatus

cation transport

zinc ion transport

zinc ion binding

cation transmembrane transporter activity

membrane

integral to membrane

 
206867_at 0.292 5.045 3.344 4.370e-03 0.117 -1.960 GCKR glucokinase (hexokinase 4) regulator 2 27573209 NM_001486 2p23 Hs.89771 41

protein import into nucleus, translocation

cellular glucose homeostasis

enzyme inhibitor activity

protein binding

nucleus

nucleoplasm

cytosol

 
229116_at -1.235 6.480 -3.344 4.370e-03 0.117 -1.960 CNKSR2 connector enhancer of kinase suppressor of Ras 2 X 21302900 AI670947 Xp22.12 Hs.555917 10

protein binding

cytoplasm

centrosome

plasma membrane

regulation of signal transduction

 
1558315_s_at -0.447 3.268 -3.343 4.372e-03 0.117 -1.961 HOOK3 hook homolog 3 (Drosophila) 8 42871189 AV710762 8p11.21 Hs.162852 13

cytoplasm

Golgi apparatus

cis-Golgi network

cytoskeleton

microtubule

endosome organization

lysosome organization

microtubule binding

endosome to lysosome transport

protein transport

HOPS complex

cytoplasmic microtubule organization

identical protein binding

early endosome to late endosome transport

Golgi localization

FHF complex

 
236866_at 0.361 4.787 3.343 4.375e-03 0.117 -1.961 GALNS galactosamine (N-acetyl)-6-sulfate sulfatase 16 -87407642 AA884446 16q24.3 Hs.271383 39

N-acetylgalactosamine-4-sulfatase activity

calcium ion binding

lysosome

metabolic process

hydrolase activity

glycosaminoglycan metabolic process

N-acetylgalactosamine-6-sulfatase activity

Glycosaminoglycan degradation

Metabolic pathways

Lysosome

212309_at -0.501 8.706 -3.343 4.377e-03 0.117 -1.962 CLASP2 cytoplasmic linker associated protein 2 3 -33512741 AV725315 3p22.3 Hs.108614 17

condensed chromosome kinetochore

protein binding

cytoplasm

Golgi apparatus

centrosome

spindle

kinetochore microtubule

cytoskeleton

cytoplasmic microtubule

cell cortex

negative regulation of microtubule depolymerization

cell cycle

mitosis

establishment or maintenance of cell polarity

galactoside 2-alpha-L-fucosyltransferase activity

regulation of microtubule polymerization or depolymerization

microtubule plus-end binding

cell division

 
1560116_a_at -0.873 8.323 -3.343 4.379e-03 0.117 -1.962 NEDD1 neural precursor cell expressed, developmentally down-regulated 1 12 95825131, 95825374 AL832468 12q23.1 Hs.270084 10

pericentriolar material

spindle pole

cytoplasm

centriole

microtubule basal body

cell cycle

mitosis

apical part of cell

cell division

 
1565269_s_at -0.669 5.359 -3.343 4.379e-03 0.117 -1.962 ATF1 activating transcription factor 1 12 49444085 AF047022 12q13 Hs.648565 45

transcription factor activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

sequence-specific DNA binding

protein dimerization activity

 
217757_at 0.505 9.397 3.342 4.384e-03 0.117 -1.963 A2M alpha-2-macroglobulin 12 -9111570 NM_000014 12p13.3-p12.3 Hs.212838 131

negative regulation of complement activation, lectin pathway

serine-type endopeptidase inhibitor activity

extracellular region

extracellular region

extracellular space

enzyme binding

interleukin-8 binding

interleukin-1 binding

platelet alpha granule lumen

tumor necrosis factor binding

Complement and coagulation cascades

203463_s_at -0.413 6.266 -3.342 4.386e-03 0.117 -1.964 EPN2 epsin 2 17 19081282 H05668 17p11.2 Hs.715517 13

cytoplasm

endocytosis

lipid binding

clathrin-coated vesicle

cytoplasmic vesicle

Endocytosis

204847_at -0.604 6.957 -3.341 4.390e-03 0.117 -1.964 ZBTB11 zinc finger and BTB domain containing 11 3 -102850972 NM_014415 3q12.3 Hs.655286 Hs.715553 Hs.715814 5

DNA binding

protein binding

intracellular

nucleus

nucleolus

zinc ion binding

regulation of transcription

metal ion binding

 
1555844_s_at -0.449 8.515 -3.341 4.396e-03 0.118 -1.966 HNRNPM heterogeneous nuclear ribonucleoprotein M 19 8415802 AL713781 19p13.3-p13.2 Hs.465808 Hs.666214 28

nucleotide binding

nuclear mRNA splicing, via spliceosome

nuclear mRNA splicing, via spliceosome

RNA binding

nucleus

spliceosomal complex

nucleolus

integral to plasma membrane

RNA splicing

protein domain specific binding

 
234947_s_at -0.484 7.166 -3.340 4.402e-03 0.118 -1.967 C10orf84 chromosome 10 open reading frame 84 10 -120058561 AK026630 10q26.11 Hs.372309 5    
226626_at -0.500 7.137 -3.339 4.413e-03 0.118 -1.969 THOC2 THO complex 2 X -122562092 AL133117 Xq25-q26.3 Hs.592243 10

RNA binding

protein binding

nucleus

mRNA processing

transport

RNA splicing

mRNA transport

 
220234_at 0.426 4.739 3.337 4.427e-03 0.118 -1.972 CA8 carbonic anhydrase VIII 8 -61263976 NM_004056 8q11-q12 Hs.654388 14

carbonate dehydratase activity

protein binding

cytoplasm

one-carbon metabolic process

zinc ion binding

metal ion binding

phosphoinositide-mediated signaling

Nitrogen metabolism

212387_at 0.450 7.692 3.337 4.432e-03 0.118 -1.973 TCF4 transcription factor 4 18 -51040559 BG495771 18q21.1 Hs.605153 55

transcription factor activity

protein binding

nucleus

regulation of transcription

positive regulation of transcription, DNA-dependent

protein heterodimerization activity

 
228494_at -0.627 6.754 -3.335 4.452e-03 0.118 -1.977 PPP1R9A protein phosphatase 1, regulatory (inhibitor) subunit 9A 7 94374884 AI888150 7q21.3 Hs.21816 12

actin binding

protein binding

cytoplasm

cytoskeleton

actin filament organization

multicellular organismal development

nervous system development

synaptosome

cell junction

cell differentiation

filopodium

cortical actin cytoskeleton

dendritic spine

synapse

 
212245_at -0.392 8.243 -3.335 4.453e-03 0.118 -1.978 MCFD2 multiple coagulation factor deficiency 2 2 -46982518 AL567779 2p21 Hs.293689 19

calcium ion binding

extracellular region

endoplasmic reticulum

ER-Golgi intermediate compartment

Golgi apparatus

protein transport

vesicle-mediated transport

carboxylic acid metabolic process

 
221620_s_at 0.525 9.078 3.334 4.454e-03 0.118 -1.978 APOO apolipoprotein O X -23761397 AF061264 Xp22.11 Hs.495851 6

extracellular region

lipid transport

membrane

integral to membrane

very-low-density lipoprotein particle

low-density lipoprotein particle

high-density lipoprotein particle

 
213463_s_at -0.368 6.371 -3.334 4.455e-03 0.118 -1.978 FAM149B1 family with sequence similarity 149, member B1 10 74597882 AW300504 10q22.2 Hs.408577 4    
208935_s_at 0.337 3.839 3.334 4.457e-03 0.118 -1.979 LGALS8 lectin, galactoside-binding, soluble, 8 1 234748187, 234753361, 234753699 L78132 1q42-q43 Hs.4082 Hs.708114 29

sugar binding

extracellular space

cytoplasm

 
217216_x_at -0.399 5.247 -3.334 4.461e-03 0.118 -1.979 MLH3 mutL homolog 3 (E. coli) 14 -74550219 AC006530 14q24.3 Hs.436650 28

satellite DNA binding

protein binding

ATP binding

nucleus

mismatch repair

response to DNA damage stimulus

reciprocal meiotic recombination

mismatched DNA binding

Mismatch repair

224973_at -0.356 3.044 -3.333 4.466e-03 0.118 -1.980 FAM46A family with sequence similarity 46, member A 6 -82512165 AL078599 6q14 Hs.10784 11    
226037_s_at -0.468 6.758 -3.333 4.467e-03 0.118 -1.980 TAF9B TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa X -77271900, 1383006 AL049589 Xq13.1-q21.1 Hs.592248 Hs.643614 Hs.714006 8

DNA binding

transcription corepressor activity

protein binding

nucleus

transcription factor TFIID complex

transcription initiation

negative regulation of specific transcription from RNA polymerase II promoter

positive regulation of cell growth

transcription factor TFTC complex

negative regulation of apoptosis

regulation of transcription

Basal transcription factors

208752_x_at -0.465 9.727 -3.333 4.467e-03 0.118 -1.981 NAP1L1 nucleosome assembly protein 1-like 1 12 -74724938 AI888672 12q21.2 Hs.524599 Hs.695185 17

protein binding

nucleus

chromatin assembly complex

DNA replication

nucleosome assembly

positive regulation of cell proliferation

melanosome

 
227693_at -0.515 6.115 -3.333 4.467e-03 0.118 -1.981 WDR20 WD repeat domain 20 14 101675964, 101675964, 101675964 AI092930 14q32.31 Hs.36859 7    
211212_s_at -0.583 4.231 -3.333 4.469e-03 0.118 -1.981 ORC5L origin recognition complex, subunit 5-like (yeast) 7 -103595859, -103554023 AF081459 7q22.1 Hs.432948 28

nucleotide binding

DNA replication origin binding

ATP binding

nucleus

nucleoplasm

DNA replication

DNA replication

DNA replication initiation

identical protein binding

Cell cycle

201785_at 0.648 8.767 3.333 4.469e-03 0.118 -1.981 RNASE1 ribonuclease, RNase A family, 1 (pancreatic) 14 -20339354, -20339354 NM_002933 14q11.2 Hs.78224 42

nucleic acid binding

endonuclease activity

pancreatic ribonuclease activity

extracellular region

hydrolase activity

 
1562403_a_at -0.507 7.147 -3.332 4.472e-03 0.118 -1.982 SLC8A3 solute carrier family 8 (sodium/calcium exchanger), member 3 14 -69580686, -69580686, -69580686 AK096553 14q24.1 Hs.337696 16

calcium:sodium antiporter activity

calcium ion binding

calmodulin binding

ion transport

sodium ion transport

calcium ion transport

cell communication

antiporter activity

membrane

integral to membrane

sodium ion binding

Calcium signaling pathway

212460_at -0.456 6.872 -3.332 4.477e-03 0.118 -1.982 C14orf147 chromosome 14 open reading frame 147 14 -33971894 BE738425 14q13.1 Hs.269909 5

serine C-palmitoyltransferase activity

protein binding

endoplasmic reticulum

membrane

integral to membrane

serine C-palmitoyltransferase complex

sphingolipid biosynthetic process

 
203339_at -0.627 8.822 -3.332 4.481e-03 0.118 -1.983 SLC25A12 solute carrier family 25 (mitochondrial carrier, Aralar), member 12 2 -172348160 AI887457 2q24 Hs.470608 27

transporter activity

L-glutamate transmembrane transporter activity

calcium ion binding

protein binding

mitochondrion

mitochondrial inner membrane

transport

L-aspartate transmembrane transporter activity

aspartate transport

L-glutamate transport

membrane

integral to membrane

malate-aspartate shuttle

response to calcium ion

 
227678_at -1.142 6.963 -3.331 4.484e-03 0.118 -1.984 XRCC6BP1 XRCC6 binding protein 1 12 56621711 AI628122 12q14.1 Hs.61188 3

DNA-dependent protein kinase activity

DNA-dependent protein kinase-DNA ligase 4 complex

double-strand break repair via nonhomologous end joining

proteolysis

peptidase activity

metallopeptidase activity

zinc ion binding

metal ion binding

 
210836_x_at -0.443 3.184 -3.331 4.485e-03 0.118 -1.984 PDE4D phosphodiesterase 4D, cAMP-specific (phosphodiesterase E3 dunce homolog, Drosophila) 5 -58300622, -58300622 AF012073 5q12 Hs.117545 89

3',5'-cyclic-AMP phosphodiesterase activity

soluble fraction

insoluble fraction

cytoplasm

centrosome

cytoskeleton

signal transduction

membrane

hydrolase activity

metal ion binding

Purine metabolism

228652_at 0.469 7.520 3.330 4.493e-03 0.118 -1.986 ZNF776 zinc finger protein 776 19 62949975 AI279532 19q13.43 Hs.109540 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
205826_at -0.943 9.988 -3.330 4.495e-03 0.118 -1.986 MYOM2 myomesin (M-protein) 2, 165kDa 8 1980564 NM_003970 8p23.3 Hs.443683 9

striated muscle thick filament

striated muscle contraction

structural constituent of muscle

 
221763_at -0.565 7.283 -3.330 4.497e-03 0.118 -1.987 JMJD1C jumonji domain containing 1C 10 -64596993, -64596993 AI694023 10q21.3 Hs.413416 10

iron ion binding

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

oxidoreductase activity

chromatin modification

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

metal ion binding

thyroid hormone receptor binding

oxidation reduction

 
213508_at -0.526 7.095 -3.329 4.502e-03 0.119 -1.988 C14orf147 chromosome 14 open reading frame 147 14 -33971894 AA142942 14q13.1 Hs.269909 5

serine C-palmitoyltransferase activity

protein binding

endoplasmic reticulum

membrane

integral to membrane

serine C-palmitoyltransferase complex

sphingolipid biosynthetic process

 
221883_at -0.457 6.012 -3.328 4.517e-03 0.119 -1.991 PKNOX1 PBX/knotted 1 homeobox 1 21 43267711 AA133342 21q22.3 Hs.431043 25

angiogenesis

specific RNA polymerase II transcription factor activity

RNA polymerase II transcription factor activity, enhancer binding

protein binding

nucleus

transcription factor complex

cytoplasm

hemopoiesis

T cell differentiation

erythrocyte differentiation

camera-type eye development

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

protein heterodimerization activity

 
227250_at -0.780 6.666 -3.327 4.520e-03 0.119 -1.991 KREMEN1 kringle containing transmembrane protein 1 22 27799065, 27799105 BF221745 22q12.1 Hs.229335 11

molecular_function

membrane fraction

cell communication

membrane

integral to membrane

Wnt receptor signaling pathway

 
241533_at 0.280 5.388 3.327 4.522e-03 0.119 -1.992 LOC731656 hypothetical LOC731656 1   AV652367   Hs.702477 1    
1555057_at -0.308 4.205 -3.326 4.528e-03 0.119 -1.993 NDUFS4 NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase) 5 52892221 AB062482 5q11.1 Hs.528222 28

regulation of protein amino acid phosphorylation

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

oxygen and reactive oxygen species metabolic process

transport

brain development

NADH dehydrogenase (ubiquinone) activity

membrane

oxidoreductase activity, acting on NADH or NADPH

cAMP-mediated signaling

electron transport chain

mitochondrial respiratory chain complex I assembly

cellular respiration

positive regulation of fibroblast proliferation

response to cAMP

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

225427_s_at 0.398 8.569 3.326 4.536e-03 0.119 -1.995 APOA1BP apolipoprotein A-I binding protein 1 154828181 BE871169 1q22-q21.2 Hs.528320 4

protein binding

extracellular region

biological_process

 
235779_at 0.279 3.073 3.325 4.539e-03 0.119 -1.995 LOC284408 hypothetical protein LOC284408 19   AW467077 19q13.13 Hs.570010 1    
226298_at -0.624 6.103 -3.325 4.542e-03 0.119 -1.996 RUNDC1 RUN domain containing 1 17 38386107 BE394201 17q21.31 Hs.632255 2    
206567_s_at -0.521 7.452 -3.324 4.555e-03 0.119 -1.999 PHF20 PHD finger protein 20 20 33823336 NM_016436 20q11.22-q11.23 Hs.517044 11

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
230292_at 0.500 6.050 3.321 4.577e-03 0.120 -2.003 LOC100131993 similar to hCG2020760 13   AA868809 13q14.2 Hs.709358      
212485_at -0.562 7.334 -3.321 4.581e-03 0.120 -2.004 GPATCH8 G patch domain containing 8 17 -39828175 AU146596 17q21.31 Hs.463129 8

molecular_function

cellular_component

biological_process

 
224370_s_at -0.650 4.744 -3.317 4.613e-03 0.121 -2.010 CAPS2 calcyphosine 2 12 -73956025 AF251056 12q21.1-q21.2 Hs.407154 6

calcium ion binding

 
202739_s_at -0.767 8.161 -3.316 4.624e-03 0.121 -2.012 PHKB phosphorylase kinase, beta 16 46052710 NM_000293 16q12-q13 Hs.78060 13

catalytic activity

calmodulin binding

plasma membrane

carbohydrate metabolic process

glycogen metabolic process

generation of precursor metabolites and energy

Calcium signaling pathway

Insulin signaling pathway

205495_s_at 0.521 4.997 3.316 4.625e-03 0.121 -2.013 GNLY granulysin 2 85774924 NM_006433 2p11.2 Hs.105806 36

extracellular region

extracellular space

xenobiotic metabolic process

cellular defense response

defense response to bacterium

defense response to fungus

 
205348_s_at 0.566 5.722 3.316 4.631e-03 0.121 -2.014 DYNC1I1 dynein, cytoplasmic 1, intermediate chain 1 7 95239753 NM_004411 7q21.3-q22.1 Hs.440364 17

microtubule motor activity

protein binding

cytoplasmic dynein complex

microtubule

microtubule binding

vesicle transport along microtubule

perinuclear region of cytoplasm

 
215365_at 0.301 4.533 3.315 4.637e-03 0.121 -2.015 CACNB2 calcium channel, voltage-dependent, beta 2 subunit 10 18469611, 18469815, 18589589, 18669619, 18729518 AK022426 10p12 Hs.709353 30

voltage-gated ion channel activity

voltage-gated calcium channel activity

calcium ion binding

plasma membrane

integral to plasma membrane

voltage-gated calcium channel complex

ion transport

calcium ion transport

neuromuscular junction development

MAPK signaling pathway

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

208840_s_at -0.716 6.285 -3.313 4.655e-03 0.121 -2.019 G3BP2 GTPase activating protein (SH3 domain) binding protein 2 4 -76786976, -76786976 AU149503 4q21.1 Hs.303676 15

nucleotide binding

RNA binding

protein binding

intracellular

cytoplasm

transport

cytoplasmic sequestering of NF-kappaB

Ras protein signal transduction

receptor signaling complex scaffold activity

mRNA transport

 
214065_s_at 0.302 4.956 3.313 4.660e-03 0.121 -2.020 CIB2 calcium and integrin binding family member 2 15 -76184045 BG251252 15q24 Hs.129867 6

calcium ion binding

protein binding

 
217183_at 0.243 5.383 3.312 4.666e-03 0.121 -2.021 LDLR low density lipoprotein receptor 19 11061056 S70123 19p13.3 Hs.213289 Hs.713967 374

transmembrane receptor activity

low-density lipoprotein receptor activity

calcium ion binding

endosome

plasma membrane

plasma membrane

integral to plasma membrane

coated pit

protein amino acid O-linked glycosylation

lipid metabolic process

lipid transport

endocytosis

steroid metabolic process

cholesterol metabolic process

endosome membrane

very-low-density lipoprotein receptor activity

intestinal cholesterol absorption

clathrin-coated endocytic vesicle membrane

low-density lipoprotein particle

low-density lipoprotein particle clearance

lipoprotein catabolic process

cholesterol homeostasis

interspecies interaction between organisms

Endocytosis

213684_s_at -0.598 12.122 -3.312 4.667e-03 0.121 -2.021 PDLIM5 PDZ and LIM domain 5 4 95592060, 95592060 BF671400 4q22 Hs.480311 34

actin binding

protein kinase C binding

protein binding

membrane fraction

cytosol

zinc ion binding

actin cytoskeleton

Z disc

actinin binding

metal ion binding

 
1556988_s_at -0.330 6.916 -3.311 4.672e-03 0.121 -2.022 CHD1L chromodomain helicase DNA binding protein 1-like 1 145180914 BE220618 1q12 Hs.191164 12

nucleotide binding

DNA binding

helicase activity

ATP binding

nucleus

ATP-dependent helicase activity

hydrolase activity

 
229700_at 0.695 5.373 3.311 4.680e-03 0.122 -2.023 ZNF738 zinc finger protein 738 19 21333574 BE966267 19p12 Hs.124384 Hs.359535 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

 
200627_at -0.563 10.402 -3.310 4.681e-03 0.122 -2.024 PTGES3 prostaglandin E synthase 3 (cytosolic) 12 -55343391 BC003005 12 12q13.3 Hs.50425 36

telomere maintenance

chromosome, telomeric region

prostaglandin biosynthetic process

telomerase activity

telomerase holoenzyme complex

cytoplasm

fatty acid biosynthetic process

signal transduction

isomerase activity

prostaglandin-E synthase activity

unfolded protein binding

 
225024_at -0.352 6.693 -3.309 4.692e-03 0.122 -2.026 RPRD1B regulation of nuclear pre-mRNA domain containing 1B 20 36095361 AL117521 20q11.21-q12 Hs.278839 7    
235863_at -0.395 6.936 -3.309 4.694e-03 0.122 -2.026 JSRP1 junctional sarcoplasmic reticulum protein 1 19 -2203251 AI805145 19p13.3 Hs.712901 4

membrane

sarcoplasmic reticulum membrane

 
1558700_s_at 0.634 4.153 3.309 4.696e-03 0.122 -2.027 ZNF260 zinc finger protein 260 19 -41693433 BC042676 19q13.12 Hs.18103 5

DNA binding

intracellular

nucleus

multicellular organismal development

zinc ion binding

regulation of transcription

metal ion binding

 
223191_at -0.359 10.153 -3.309 4.697e-03 0.122 -2.027 COX16 COX16 cytochrome c oxidase assembly homolog (S. cerevisiae) 14 -69861551 AF151037 14q24.2 Hs.709581 5

mitochondrion

membrane

integral to membrane

mitochondrial membrane

 
205168_at 0.288 4.954 3.309 4.698e-03 0.122 -2.027 DDR2 discoidin domain receptor tyrosine kinase 2 1 160868851 NM_006182 1q23.3 Hs.275757 Hs.593833 26

nucleotide binding

transmembrane receptor protein tyrosine kinase activity

receptor activity

ATP binding

integral to plasma membrane

protein amino acid phosphorylation

cell adhesion

signal transduction

transmembrane receptor protein tyrosine kinase signaling pathway

positive regulation of cell proliferation

membrane

transferase activity

 
223503_at 0.391 3.412 3.308 4.700e-03 0.122 -2.028 TMEM163 transmembrane protein 163 2 -134929800 AF255647 2q21.3 Hs.369471 Hs.595089 5

membrane

integral to membrane

 
204160_s_at -0.624 7.255 -3.308 4.701e-03 0.122 -2.028 ENPP4 ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative function) 6 46205659 AW194947 6p21.1 Hs.643497 4

metabolic process

membrane

integral to membrane

hydrolase activity

 
218537_at -0.978 8.793 -3.308 4.702e-03 0.122 -2.028 HCFC1R1 host cell factor C1 regulator 1 (XPO1 dependent) 16 -3012626 NM_017885 16p13.3 Hs.719259 2

nucleus

cytoplasm

 
203390_s_at 0.416 4.767 3.308 4.706e-03 0.122 -2.029 KIF3C kinesin family member 3C 2 -26002958 NM_002254 2p23 Hs.21611 9

nucleotide binding

microtubule motor activity

ATP binding

kinesin complex

microtubule

microtubule-based movement

 
214550_s_at -0.443 6.476 -3.307 4.713e-03 0.122 -2.030 TNPO3 transportin 3 7 -128382183 AF145029 7q32.1 Hs.193613 16

receptor activity

protein binding

nucleus

cytoplasm

protein transport

 
203266_s_at -0.404 6.793 -3.306 4.720e-03 0.122 -2.031 MAP2K4 mitogen-activated protein kinase kinase 4 17 11864859 NM_003010 17p11.2 Hs.514681 92

nucleotide binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

signal transduction

JNK cascade

transferase activity

MAPK signaling pathway

ErbB signaling pathway

Toll-like receptor signaling pathway

Fc epsilon RI signaling pathway

GnRH signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

238841_at 0.363 5.301 3.306 4.723e-03 0.122 -2.032 PTPDC1 protein tyrosine phosphatase domain containing 1 9 95832896, 95886566 AA651920 9q22.32 Hs.437943 2

protein tyrosine phosphatase activity

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

 
32128_at 0.370 3.617 3.305 4.730e-03 0.122 -2.033 CCL18 chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated) 17 31415755 Y13710 17q11.2 Hs.143961 35

extracellular region

extracellular space

chemotaxis

inflammatory response

immune response

signal transduction

cell-cell signaling

chemokine activity

response to biotic stimulus

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

225853_at -0.522 7.011 -3.304 4.740e-03 0.122 -2.035 GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 14 -52311660 BE789346 14q22.1 Hs.702056 5

glucosamine 6-phosphate N-acetyltransferase activity

late endosome

ER-Golgi intermediate compartment

Golgi apparatus

metabolic process

acyltransferase activity

membrane

transferase activity

Amino sugar and nucleotide sugar metabolism

206453_s_at -0.532 11.058 -3.304 4.741e-03 0.122 -2.035 NDRG2 NDRG family member 2 14 -20554761, -20554761 NM_016250 14q11.2 Hs.525205 42

molecular_function

nucleus

cytoplasm

Golgi apparatus

centrosome

cytosol

multicellular organismal development

nervous system development

cell differentiation

perinuclear region of cytoplasm

 
215034_s_at 0.414 6.910 3.304 4.741e-03 0.122 -2.035 TM4SF1 transmembrane 4 L six family member 1 3 -150569494 AI189753 3q21-q25 Hs.715499 16

molecular_function

integral to plasma membrane

biological_process

membrane

 
231867_at 1.451 3.793 3.304 4.743e-03 0.122 -2.036 ODZ2 odz, odd Oz/ten-m homolog 2 (Drosophila) 5 166644420 AB032953 5q34 Hs.654631 Hs.715483 9

signal transduction

membrane

integral to membrane

 
202717_s_at -0.623 6.828 -3.304 4.746e-03 0.122 -2.036 CDC16 cell division cycle 16 homolog (S. cerevisiae) 13 114018463 NM_003903 13q34 Hs.374127 32

binding

nucleoplasm

cytoplasm

centrosome

cytosol

spindle microtubule

cell cycle

regulation of mitosis

cell proliferation

modification-dependent protein catabolic process

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

cell division

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

200882_s_at -0.360 9.443 -3.303 4.755e-03 0.122 -2.038 PSMD4 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 1 149493820 NM_002810 1q21.3 Hs.505059 62

proteasome complex

protein binding

cytosol

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

207508_at 0.416 11.906 3.303 4.757e-03 0.122 -2.039 ATP5G3 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) 2 -175749231, -175749231 NM_001689 2q31.1 Hs.429 10

transporter activity

protein binding

mitochondrion

mitochondrial proton-transporting ATP synthase complex

ion transport

lipid binding

hydrogen ion transmembrane transporter activity

ATP synthesis coupled proton transport

proton transport

membrane

integral to membrane

proton-transporting ATP synthase complex, coupling factor F(o)

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

204772_s_at -0.490 5.919 -3.302 4.759e-03 0.122 -2.039 TTF1 transcription termination factor, RNA polymerase I 9 -134240757 NM_007344 9q34.13 Hs.54780 18

DNA binding

transcription termination factor activity

nucleus

nucleoplasm

nucleolus

transcription termination

negative regulation of DNA replication

regulation of transcription

 
205560_at 0.296 4.343 3.302 4.761e-03 0.122 -2.039 PCSK5 proprotein convertase subtilisin/kexin type 5 9 77695379 NM_006200 9q21.3 Hs.368542 40

kidney development

kidney development

renin secretion into blood stream

serine-type endopeptidase activity

extracellular region

extracellular space

Golgi apparatus

Golgi lumen

signal peptide processing

proteolysis

cell-cell signaling

heart development

embryo implantation

peptidase activity

anterior/posterior pattern formation

viral assembly, maturation, egress, and release

secretory granule

respiratory tube development

nerve growth factor processing

limb morphogenesis

cytokine biosynthetic process

peptide binding

peptide biosynthetic process

embryonic gut development

embryonic skeletal system development

 
206117_at -0.589 13.220 -3.302 4.764e-03 0.122 -2.040 TPM1 tropomyosin 1 (alpha) 15 61121890, 61121890, 61127688 NM_000366 15q22.1 Hs.133892 76

stress fiber

positive regulation of heart rate by epinephrine

actin binding

structural constituent of cytoskeleton

cytoplasm

cytoskeleton

muscle thin filament tropomyosin

cell motion

regulation of muscle contraction

cytoskeleton organization

regulation of heart contraction

structural constituent of muscle

sarcomere

muscle filament sliding

negative regulation of cell migration

ruffle organization

bleb

ruffle membrane

positive regulation of ATPase activity

cellular response to reactive oxygen species

wound healing

sarcomere organization

positive regulation of cell adhesion

positive regulation of stress fiber formation

ventricular cardiac muscle morphogenesis

cardiac muscle contraction

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

224961_at -0.340 6.565 -3.302 4.766e-03 0.122 -2.040 SCYL2 SCY1-like 2 (S. cerevisiae) 12 99185679 AB037781 12q23.1 Hs.506481 8

protein kinase activity

binding

ATP binding

cytoplasm

endosome

Golgi apparatus

protein amino acid phosphorylation

endosome membrane

membrane

clathrin-coated vesicle

cytoplasmic vesicle

perinuclear region of cytoplasm

 
210886_x_at 0.398 6.997 3.301 4.768e-03 0.122 -2.041 TP53TG1 TP53 target 1 (non-protein coding) 7 -86792599 AB007457 7q21.1 Hs.274329 3

signal transducer activity

response to stress

 
202230_s_at -0.465 8.096 -3.301 4.776e-03 0.122 -2.042 CHERP calcium homeostasis endoplasmic reticulum protein 19 -16489699 NM_006387 19p13.1 Hs.631627 5

molecular_function

RNA binding

cellular_component

intracellular

cytoplasm

endoplasmic reticulum

RNA processing

nervous system development

biological_process

perinuclear region of cytoplasm

 
211105_s_at -0.885 7.707 -3.300 4.786e-03 0.123 -2.044 NFATC1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 18 75256759, 75256759, 75261313 U80918 18q23 Hs.534074 Hs.701518 83

transcription factor activity

FK506 binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

intracellular signaling cascade

transcription activator activity

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

222237_s_at 0.535 5.013 3.298 4.804e-03 0.123 -2.048 ZFP112 zinc finger protein 112 homolog (mouse) 19 -49522545 AC084239 19q13.2 Hs.48589 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1552470_a_at 0.452 5.231 3.297 4.808e-03 0.123 -2.049 ABHD11 abhydrolase domain containing 11 7 -72789980, -72789935, -72788362, -72788362 NM_148914 7q11.23 Hs.647045 9

molecular_function

cellular_component

biological_process

hydrolase activity

 
223244_s_at 0.300 11.718 3.297 4.810e-03 0.123 -2.049 NDUFA12 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 12 -93889240 AF217092 12q22 Hs.506374 9

NADH dehydrogenase activity

mitochondrion

mitochondrial inner membrane

transport

response to oxidative stress

respiratory gaseous exchange

NADH dehydrogenase (ubiquinone) activity

electron carrier activity

membrane

electron transport chain

respiratory chain

 
229656_s_at 0.778 4.706 3.296 4.820e-03 0.123 -2.051 EML6 echinoderm microtubule associated protein like 6 2 54805652 AA236463 2p16.2-p16.1 Hs.656692  

cytoplasm

microtubule

 
234071_at -0.381 3.755 -3.295 4.835e-03 0.123 -2.054 DEPDC6 DEP domain containing 6 8 120955080 AU147969 8q24.12 Hs.112981 11

protein binding

intracellular

negative regulation of protein kinase activity

intracellular signaling cascade

negative regulation of TOR signaling pathway

regulation of apoptosis

negative regulation of cell size

 
213083_at 0.306 5.142 3.294 4.838e-03 0.123 -2.054 SLC35D2 solute carrier family 35, member D2 9 -98122809 AJ005866 9q22.32 Hs.494556 6

nucleotide-sugar transmembrane transporter activity

cellular_component

Golgi apparatus

biological_process

carbohydrate transport

membrane

integral to membrane

 
1555725_a_at 0.582 9.523 3.294 4.840e-03 0.123 -2.055 RGS5 regulator of G-protein signaling 5 1 -161378720 AF493929 1q23.1 Hs.24950 26

signal transducer activity

GTPase activator activity

regulation of G-protein coupled receptor protein signaling pathway

negative regulation of signal transduction

 
214525_x_at -0.357 6.037 -3.294 4.844e-03 0.123 -2.055 MLH3 mutL homolog 3 (E. coli) 14 -74550219 AB039667 14q24.3 Hs.436650 28

satellite DNA binding

protein binding

ATP binding

nucleus

mismatch repair

response to DNA damage stimulus

reciprocal meiotic recombination

mismatched DNA binding

Mismatch repair

222907_x_at -0.792 5.851 -3.294 4.845e-03 0.123 -2.056 TMEM50B transmembrane protein 50B 21 -33743317 BC000569 21q22.11 Hs.433668 8

molecular_function

endoplasmic reticulum

plasma membrane

biological_process

integral to membrane

 
209448_at -0.558 6.969 -3.294 4.845e-03 0.123 -2.056 HTATIP2 HIV-1 Tat interactive protein 2, 30kDa 11 20341806, 20341822, 20341864, 20341978, 20342262 BC002439 11p15.1 Hs.90753 31

RNA polymerase II transcription factor activity

transcription coactivator activity

protein binding

nucleus

nuclear envelope

cytoplasm

regulation of transcription from RNA polymerase II promoter

anti-apoptosis

induction of apoptosis

multicellular organismal development

oxidoreductase activity

cell differentiation

regulation of apoptosis

interspecies interaction between organisms

regulation of angiogenesis

nuclear import

oxidation reduction

 
206576_s_at 0.334 6.075 3.293 4.847e-03 0.123 -2.056 CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 19 -47703297 NM_001712 19q13.2 Hs.512682 97

angiogenesis

molecular_function

extracellular region

membrane fraction

plasma membrane

plasma membrane

integral to plasma membrane

homophilic cell adhesion

integrin-mediated signaling pathway

cell migration

 
91684_g_at 0.401 6.190 3.293 4.850e-03 0.123 -2.057 EXOSC4 exosome component 4 8 145205509 AI571298 8q24.3 Hs.632041 16

3'-5'-exoribonuclease activity

exosome (RNase complex)

RNA binding

exonuclease activity

protein binding

nucleus

nucleolus

cytoplasm

rRNA processing

RNA processing

hydrolase activity

RNA degradation

201078_at -0.528 7.859 -3.293 4.850e-03 0.123 -2.057 TM9SF2 transmembrane 9 superfamily member 2 13 98951728 NM_004800 13q32.3 Hs.654824 9

endosome

integral to plasma membrane

transport

membrane

 
208941_s_at 0.305 6.086 3.293 4.853e-03 0.123 -2.057 SEPHS1 selenophosphate synthetase 1 10 -13400086 BC000941 10p14 Hs.124027 8

nucleotide binding

selenide, water dikinase activity

ATP binding

GTP binding

protein modification process

selenium binding

transferase activity

Selenoamino acid metabolism

Metabolic pathways

204482_at 0.525 7.508 3.293 4.855e-03 0.123 -2.057 CLDN5 claudin 5 22 -17890546 NM_003277 22q11.21 Hs.505337 45

structural molecule activity

plasma membrane

tight junction

integral to membrane

calcium-independent cell-cell adhesion

cell junction

identical protein binding

Cell adhesion molecules (CAMs)

Tight junction

Leukocyte transendothelial migration

213717_at -0.372 10.540 -3.293 4.855e-03 0.123 -2.058 LDB3 LIM domain binding 3 10 88418300, 88418405, 88418405 AA211481 10q22.3-q23.2 Hs.657271 15

protein binding

cytoplasm

cytoskeleton

zinc ion binding

Z disc

pseudopodium

metal ion binding

perinuclear region of cytoplasm

 
201780_s_at -0.514 8.058 -3.293 4.856e-03 0.123 -2.058 RNF13 ring finger protein 13 3 151013164 NM_007282 3q25.1 Hs.12333 Hs.712766 10

protein binding

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
203460_s_at -0.415 5.881 -3.292 4.864e-03 0.123 -2.059 PSEN1 presenilin 1 14 72672895 NM_007318 14q24.3 Hs.3260 386

kinetochore

endopeptidase activity

membrane fraction

integral to nuclear inner membrane

nuclear outer membrane

mitochondrion

endoplasmic reticulum

Golgi apparatus

integral to plasma membrane

membrane protein ectodomain proteolysis

apoptosis

anti-apoptosis

chromosome segregation

Notch receptor processing

intracellular signaling cascade

beta-catenin binding

cell death

peptidase activity

cell surface

membrane

cell-cell adhesion

protein processing

PDZ domain binding

endoplasmic reticulum calcium ion homeostasis

regulation of phosphorylation

amyloid precursor protein catabolic process

positive regulation of catalytic activity

Wnt signaling pathway

Notch signaling pathway

Neurotrophin signaling pathway

Alzheimer's disease

207335_x_at 0.377 10.749 3.291 4.868e-03 0.123 -2.060 ATP5I ATP synthase, H+ transporting, mitochondrial F0 complex, subunit E 4 -656224 NM_007100 4p16.3 Hs.85539 14

mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)

mitochondrion

ion transport

hydrogen ion transmembrane transporter activity

ATP synthesis coupled proton transport

proton transport

membrane

ATPase activity

Oxidative phosphorylation

Metabolic pathways

228328_at -0.513 7.887 -3.291 4.871e-03 0.123 -2.061 KLHL28 kelch-like 28 (Drosophila) 14 -44463276 AI982758 14q21.2 Hs.653206 5

protein binding

 
204223_at 0.509 5.014 3.291 4.872e-03 0.123 -2.061 PRELP proline/arginine-rich end leucine-rich repeat protein 1 201711505 NM_002725 1q32 Hs.632481 13

skeletal system development

extracellular matrix structural constituent

protein binding

extracellular region

proteinaceous extracellular matrix

cell aging

 
226368_at 0.292 4.921 3.289 4.889e-03 0.124 -2.064 CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 12 103374907 AI806905 12q Hs.17569 11

N-acetylgalactosamine 4-O-sulfotransferase activity

chondrocyte development

Golgi apparatus

respiratory gaseous exchange

post-embryonic development

membrane

integral to membrane

carbohydrate biosynthetic process

transferase activity

chondroitin sulfate biosynthetic process

negative regulation of transforming growth factor beta receptor signaling pathway

polysaccharide localization

tail morphogenesis

regulation of cell proliferation

embryonic digit morphogenesis

negative regulation of apoptosis

chondroitin 4-sulfotransferase activity

developmental growth

embryonic viscerocranium morphogenesis

embryonic skeletal system morphogenesis

cartilage development

Chondroitin sulfate biosynthesis

Sulfur metabolism

222899_at 0.302 4.932 3.289 4.894e-03 0.124 -2.065 ITGA11 integrin, alpha 11 15 -66381095 AF109681 15q23 Hs.436416 12

magnesium ion binding

receptor activity

calcium ion binding

collagen binding

substrate-bound cell migration

cell adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

muscle organ development

integrin complex

membrane

integral to membrane

Focal adhesion

ECM-receptor interaction

Regulation of actin cytoskeleton

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

218954_s_at -0.499 6.227 -3.289 4.896e-03 0.124 -2.065 BRF2 BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like 8 -37820560 AF298153 8p11.23 Hs.709301 11

protein binding

nucleus

transcription factor complex

transcription initiation

regulation of transcription, DNA-dependent

zinc ion binding

transcription regulator activity

metal ion binding

 
208643_s_at -0.372 8.176 -3.289 4.896e-03 0.124 -2.065 XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 2 216682264 J04977 2q35 Hs.388739 148

nucleotide binding

telomere maintenance

nuclear telomere cap complex

DNA binding

double-stranded telomeric DNA binding

ATP-dependent DNA helicase activity

helicase activity

ATP binding

nucleus

nucleoplasm

chromosome

double-strand break repair via nonhomologous end joining

response to DNA damage stimulus

protein C-terminus binding

promoter binding

hydrolase activity

provirus integration

initiation of viral infection

Non-homologous end-joining

227968_at 0.313 6.391 3.289 4.897e-03 0.124 -2.065 PDDC1 Parkinson disease 7 domain containing 1 11 -757222 AI139988 11p15.5 Hs.218362 4

extracellular region

 
221195_at -0.442 4.261 -3.287 4.912e-03 0.124 -2.068 RNFT1 ring finger protein, transmembrane 1 17 -55384504 NM_016125 17q23.1 Hs.531701 1

protein binding

zinc ion binding

membrane

integral to membrane

metal ion binding

 
225442_at 0.418 6.635 3.287 4.912e-03 0.124 -2.068 DDR2 discoidin domain receptor tyrosine kinase 2 1 160868851 AI799915 1q23.3 Hs.275757 Hs.593833 26

nucleotide binding

transmembrane receptor protein tyrosine kinase activity

receptor activity

ATP binding

integral to plasma membrane

protein amino acid phosphorylation

cell adhesion

signal transduction

transmembrane receptor protein tyrosine kinase signaling pathway

positive regulation of cell proliferation

membrane

transferase activity

 
218656_s_at 0.397 7.726 3.286 4.922e-03 0.124 -2.070 LHFP lipoma HMGIC fusion partner 13 -38815028 NM_005780 13q12 Hs.507798 8

DNA binding

membrane

integral to membrane

 
208557_at 0.412 5.361 3.285 4.931e-03 0.124 -2.072 HOXA6 homeobox A6 7 -27151640 NM_024014 7p15-p14 Hs.679517 12

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anterior/posterior pattern formation

sequence-specific DNA binding

embryonic skeletal system morphogenesis

 
221280_s_at -0.449 5.421 -3.284 4.941e-03 0.124 -2.074 PARD3 par-3 partitioning defective 3 homolog (C. elegans) 10 -34440102 NM_019619 10p11.21 Hs.131489 40

protein binding

cytoplasm

plasma membrane

tight junction

tight junction

cell cortex

protein complex assembly

cell cycle

establishment or maintenance of cell polarity

activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway

axonogenesis

asymmetric cell division

cell junction

Chemokine signaling pathway

Neuroactive ligand-receptor interaction

Endocytosis

Adherens junction

Tight junction

225355_at 0.521 7.699 3.284 4.942e-03 0.124 -2.074 NEURL1B neuralized homolog 1B (Drosophila) 5 172000880 AK026748 5q35.1 Hs.91521 3

protein binding

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
213502_x_at 0.319 6.052 3.284 4.942e-03 0.124 -2.074 LOC91316 glucuronidase, beta/ immunoglobulin lambda-like polypeptide 1 pseudogene 22 -22310675 AA398569 22q11.23 Hs.148656 4    
200086_s_at 0.374 11.778 3.283 4.951e-03 0.124 -2.076 COX4I1 cytochrome c oxidase subunit IV isoform 1 16 84390696 AA854966 16q22-qter Hs.433419 17

cytochrome-c oxidase activity

protein binding

nucleus

mitochondrion

mitochondrial inner membrane

generation of precursor metabolites and energy

membrane

Oxidative phosphorylation

Metabolic pathways

Cardiac muscle contraction

Alzheimer's disease

Parkinson's disease

Huntington's disease

1554029_a_at -0.469 2.907 -3.282 4.967e-03 0.125 -2.078 TTC37 tetratricopeptide repeat domain 37 5 -94825877 BC030966 5q15 Hs.482868 4

binding

RNA degradation

201543_s_at 0.342 7.255 3.281 4.969e-03 0.125 -2.079 SAR1A SAR1 homolog A (S. cerevisiae) 10 -71579973 NM_020150 10q22.1 Hs.499960 Hs.594910 13

nucleotide binding

GTPase activity

GTP binding

intracellular

cytoplasm

Golgi apparatus

intracellular protein transport

ER to Golgi vesicle-mediated transport

vesicle-mediated transport

sarcoplasmic reticulum

 
1552562_at 0.314 4.198 3.281 4.972e-03 0.125 -2.080 ZNF570 zinc finger protein 570 19 42651821 NM_144694 19q13.12 Hs.350875 1

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
229517_at 0.442 5.782 3.280 4.985e-03 0.125 -2.082 PTPDC1 protein tyrosine phosphatase domain containing 1 9 95832896, 95886566 BE046919 9q22.32 Hs.437943 2

protein tyrosine phosphatase activity

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

 
233990_at -0.236 3.948 -3.280 4.986e-03 0.125 -2.082 C19orf61 chromosome 19 open reading frame 61 19 -48927140 AK022948 19q13.31 Hs.466875 7

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

protein binding

intracellular

 
229588_at -0.567 3.614 -3.279 4.992e-03 0.125 -2.083 DNAJC10 DnaJ (Hsp40) homolog, subfamily C, member 10 2 183289243 AA651899 2q32.1 Hs.516632 13

extracellular region

endoplasmic reticulum

endoplasmic reticulum lumen

protein folding

heat shock protein binding

cell redox homeostasis

unfolded protein binding

 
1555971_s_at -0.383 7.134 -3.279 4.996e-03 0.125 -2.084 FBXO28 F-box protein 28 1 222368413 AU154086 1q42.11 Hs.64691 Hs.713992 10

modification-dependent protein catabolic process

 
211964_at 0.772 8.145 3.277 5.014e-03 0.125 -2.087 COL4A2 collagen, type IV, alpha 2 13 109757631 X05610 13q34 Hs.508716 54

extracellular matrix structural constituent

binding

extracellular region

collagen

collagen type IV

negative regulation of angiogenesis

extracellular matrix organization

Focal adhesion

ECM-receptor interaction

Pathways in cancer

Small cell lung cancer

226998_at -0.441 7.112 -3.276 5.021e-03 0.125 -2.089 NARG1 NMDA receptor regulated 1 4 140442125 AL556909 4q31.1 Hs.715706 17

angiogenesis

protein binding

nucleus

transcription factor complex

cytoplasm

N-terminal protein amino acid acetylation

multicellular organismal development

N-acetyltransferase activity

cell differentiation

ribosome binding

regulation of transcription

positive regulation of transcription, DNA-dependent

 
209492_x_at 0.374 11.523 3.276 5.026e-03 0.125 -2.089 ATP5I ATP synthase, H+ transporting, mitochondrial F0 complex, subunit E 4 -656224 BC003679 4p16.3 Hs.85539 14

mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)

mitochondrion

ion transport

hydrogen ion transmembrane transporter activity

ATP synthesis coupled proton transport

proton transport

membrane

ATPase activity

Oxidative phosphorylation

Metabolic pathways

1557331_at -0.286 4.699 -3.276 5.026e-03 0.125 -2.089 POLR1B polymerase (RNA) I polypeptide B, 128kDa 2 113015962 CA442932 2q13 Hs.86337 21

DNA binding

DNA-directed RNA polymerase activity

protein binding

nucleus

nucleoplasm

nucleolus

transcription

zinc ion binding

transferase activity

nucleotidyltransferase activity

ribonucleoside binding

metal ion binding

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

208576_s_at 0.266 2.804 3.275 5.032e-03 0.125 -2.091 HIST1H3B histone cluster 1, H3b 6 -26139795 NM_003537 6p21.3 Hs.533292 40  

Systemic lupus erythematosus

224298_s_at -0.442 7.624 -3.275 5.033e-03 0.125 -2.091 UBAC2 UBA domain containing 2 13 98650679, 98651163 BC004528 13q32.3 Hs.508545 6

membrane

integral to membrane

 
243045_at 0.460 7.291 3.275 5.033e-03 0.125 -2.091 SMYD1 SET and MYND domain containing 1 2 88148496 N75296 2p11.2 Hs.516176 8

DNA binding

nucleus

cytoplasm

zinc ion binding

regulation of transcription

metal ion binding

 
202341_s_at 0.332 5.699 3.274 5.041e-03 0.126 -2.092 TRIM2 tripartite motif-containing 2 4 154293719, 154345047 AA149745 4q31.3 Hs.435711 6

protein binding

intracellular

cytoplasm

biological_process

zinc ion binding

metal ion binding

 
215211_at 0.367 5.517 3.274 5.044e-03 0.126 -2.093 LOC730092 RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 16 -21715451 AF054994 16p12.2 Hs.31290 Hs.348979 Hs.658149 4    
221019_s_at 0.570 6.313 3.274 5.048e-03 0.126 -2.094 COLEC12 collectin sub-family member 12 18 -309355 NM_030781 18pter-p11.3 Hs.464422 8

scavenger receptor activity

binding

calcium ion binding

sugar binding

galactose binding

phagocytosis, recognition

pattern recognition receptor activity

carbohydrate mediated signaling

membrane

integral to membrane

low-density lipoprotein binding

innate immune response

protein homooligomerization

 
201064_s_at -0.416 9.863 -3.273 5.052e-03 0.126 -2.094 PABPC4 poly(A) binding protein, cytoplasmic 4 (inducible form) 1 -39799071 NM_003819 1p32-p36 Hs.169900 17

nucleotide binding

RNA binding

protein binding

cytoplasm

RNA processing

RNA catabolic process

translation

blood coagulation

poly(A) RNA binding

poly(U) RNA binding

poly(C) RNA binding

 
223537_s_at 0.305 5.167 3.273 5.052e-03 0.126 -2.094 WNT5B wingless-type MMTV integration site family, member 5B 12 1596482, 1608672 AW007350 12p13.3 Hs.306051 11

signal transducer activity

extracellular region

proteinaceous extracellular matrix

Wnt receptor signaling pathway, calcium modulating pathway

multicellular organismal development

Wnt signaling pathway

Hedgehog signaling pathway

Melanogenesis

Pathways in cancer

Basal cell carcinoma

225379_at -0.381 8.104 -3.273 5.053e-03 0.126 -2.094 MAPT microtubule-associated protein tau 17 41327543 AA199717 17q21.1 Hs.101174 545

microtubule cytoskeleton organization

microtubule cytoskeleton organization

structural constituent of cytoskeleton

cytoplasm

cytosol

cytoskeleton

microtubule

microtubule associated complex

plasma membrane

plasma membrane

negative regulation of microtubule depolymerization

microtubule binding

microtubule binding

lipoprotein binding

SH3 domain binding

enzyme binding

axon

axon

growth cone

growth cone

positive regulation of microtubule polymerization

positive regulation of microtubule polymerization

apolipoprotein E binding

identical protein binding

cell projection

tubulin complex

tubulin complex

positive regulation of axon extension

positive regulation of axon extension

generation of neurons

MAPK signaling pathway

Alzheimer's disease

215933_s_at 0.521 3.972 3.272 5.064e-03 0.126 -2.096 HHEX hematopoietically expressed homeobox 10 94439660 Z21533 10q23.33 Hs.118651 86

liver development

transcription factor activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

mRNA export from nucleus

cell cycle

multicellular organismal development

transcription factor binding

eukaryotic initiation factor 4E binding

organ morphogenesis

anterior/posterior pattern formation

positive regulation of specific transcription from RNA polymerase II promoter

negative regulation of specific transcription from RNA polymerase II promoter

negative regulation of angiogenesis

transcription repressor activity

cell differentiation

positive regulation of Wnt receptor signaling pathway

thyroid gland development

forebrain development

negative regulation of vascular endothelial growth factor receptor signaling pathway

embryonic heart tube development

regulation of cell proliferation

sequence-specific DNA binding

Maturity onset diabetes of the young

232358_at 0.245 5.943 3.272 5.066e-03 0.126 -2.097 KIAA1328 KIAA1328 18 32663077 AB037749 18q12.2 Hs.4045 7    
216120_s_at -1.004 4.886 -3.271 5.075e-03 0.126 -2.098 ATP2B2 ATPase, Ca++ transporting, plasma membrane 2 3 -10340706 X63575 3p25.3 Hs.268942 30

nucleotide binding

magnesium ion binding

calcium-transporting ATPase activity

calcium ion binding

calmodulin binding

ATP binding

cytoplasm

plasma membrane

ATP biosynthetic process

cation transport

calcium ion transport

sensory perception of sound

metabolic process

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

neuron differentiation

Calcium signaling pathway

220936_s_at 0.431 4.046 3.271 5.076e-03 0.126 -2.099 H2AFJ H2A histone family, member J 12 14818536, 14818536 NM_018267 12p12 Hs.524280 Hs.718660 11

nucleosome

DNA binding

nucleus

chromosome

nucleosome assembly

Systemic lupus erythematosus

201314_at -0.441 8.009 -3.271 5.077e-03 0.126 -2.099 STK25 serine/threonine kinase 25 (STE20 homolog, yeast) 2 -242083104 NM_006374 2q37.3 Hs.516807 12

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

ATP binding

cytoplasm

Golgi apparatus

protein amino acid phosphorylation

response to oxidative stress

signal transduction

transferase activity

identical protein binding

 
222146_s_at 0.305 8.005 3.271 5.079e-03 0.126 -2.099 TCF4 transcription factor 4 18 -51040559 AK026674 18q21.1 Hs.605153 55

transcription factor activity

protein binding

nucleus

regulation of transcription

positive regulation of transcription, DNA-dependent

protein heterodimerization activity

 
228976_at 0.448 5.536 3.271 5.080e-03 0.126 -2.099 ICOSLG inducible T-cell co-stimulator ligand 21 -44471149 AA778249 21q22.3 Hs.14155 29

receptor binding

defense response

immune response

hyperosmotic response

signal transduction

membrane

integral to membrane

positive regulation of activated T cell proliferation

T cell activation

B cell activation

Cell adhesion molecules (CAMs)

217118_s_at -0.911 6.156 -3.271 5.081e-03 0.126 -2.100 C22orf9 chromosome 22 open reading frame 9 22 -43966786, -43966786 AK025608 22q13.31 Hs.592207 10

protein binding

 
201408_at -0.620 9.614 -3.270 5.092e-03 0.126 -2.101 PPP1CB protein phosphatase 1, catalytic subunit, beta isoform 2 28828117, 28828129 W67887 2p23 Hs.591571 Hs.702907 42

protein serine/threonine phosphatase activity

iron ion binding

protein binding

cytoplasm

carbohydrate metabolic process

glycogen metabolic process

protein amino acid dephosphorylation

cell cycle

hydrolase activity

manganese ion binding

metal ion binding

cell division

MLL5-L complex

Vascular smooth muscle contraction

Focal adhesion

Long-term potentiation

Regulation of actin cytoskeleton

Insulin signaling pathway

201351_s_at -0.456 8.669 -3.270 5.092e-03 0.126 -2.102 YME1L1 YME1-like 1 (S. cerevisiae) 10 -27439388 AF070656 10p14 Hs.499145 Hs.74647 9

nucleotide binding

metalloendopeptidase activity

ATP binding

mitochondrion

proteolysis

peptidase activity

zinc ion binding

membrane

nucleoside-triphosphatase activity

metal ion binding

 
208002_s_at 0.348 4.767 3.269 5.099e-03 0.126 -2.103 ACOT7 acyl-CoA thioesterase 7 1 -6246918, -6246918, -6246918, -6246918 NM_007274 1p36.31-p36.11 Hs.126137 11

acyl-CoA binding

carboxylesterase activity

cytoplasm

mitochondrion

lipid metabolic process

palmitoyl-CoA hydrolase activity

hydrolase activity

Biosynthesis of unsaturated fatty acids

221024_s_at 0.463 3.849 3.268 5.104e-03 0.126 -2.104 SLC2A10 solute carrier family 2 (facilitated glucose transporter), member 10 20 44771685 NM_030777 20q13.1 Hs.305971 18

transporter activity

sugar:hydrogen symporter activity

cytoplasm

carbohydrate transport

glucose transport

membrane

integral to membrane

substrate-specific transmembrane transporter activity

perinuclear region of cytoplasm

transmembrane transport

 
209657_s_at -0.685 8.384 -3.268 5.104e-03 0.126 -2.104 HSF2 heat shock transcription factor 2 6 122762394 M65217 6q22.31 Hs.158195 28

transcription factor activity

transcription coactivator activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

response to stress

spermatogenesis

protein homodimerization activity

sequence-specific DNA binding

 
205981_s_at -0.739 6.685 -3.268 5.105e-03 0.126 -2.104 ING2 inhibitor of growth family, member 2 4 184663213 NM_001564 4q35.1 Hs.107153 27

DNA binding

chromatin binding

protein binding

nucleus

regulation of transcription, DNA-dependent

signal transduction

zinc ion binding

transcription activator activity

chromatin modification

Sin3 complex

CCAAT-binding factor complex

regulation of growth

positive regulation of transcription

metal ion binding

 
244623_at -1.499 7.440 -3.268 5.111e-03 0.126 -2.105 KCNQ5 potassium voltage-gated channel, KQT-like subfamily, member 5 6 73388291 BF513800 6q14 Hs.445324 Hs.675919 15

inward rectifier potassium channel activity

voltage-gated ion channel activity

protein complex assembly

ion transport

potassium ion transport

synaptic transmission

voltage-gated potassium channel complex

membrane

integral to membrane

potassium ion binding

 
208616_s_at -0.532 10.542 -3.267 5.121e-03 0.126 -2.107 PTP4A2 protein tyrosine phosphatase type IVA, member 2 1 -32146379 U48297 1p35 Hs.470477 Hs.712749 Hs.713025 21

prenylated protein tyrosine phosphatase activity

protein binding

cytoplasm

early endosome

plasma membrane

protein amino acid dephosphorylation

hydrolase activity

 
227758_at 0.453 5.636 3.266 5.131e-03 0.126 -2.108 RERG RAS-like, estrogen-regulated, growth inhibitor 12 -15151983 AW294092 12p12.3 Hs.199487 4

nucleotide binding

GTPase activity

GTP binding

intracellular

nucleus

cytoplasm

cytosol

small GTPase mediated signal transduction

negative regulation of cell proliferation

response to hormone stimulus

GDP binding

negative regulation of cell growth

estrogen receptor binding

 
41512_at -0.551 6.164 -3.265 5.135e-03 0.126 -2.109 BRAP BRCA1 associated protein 12 -110564332 AL042733 12q24 Hs.530940 12

ubiquitin-protein ligase activity

cytoplasm

zinc ion binding

negative regulation of signal transduction

ligase activity

modification-dependent protein catabolic process

identical protein binding

metal ion binding

 
207226_at 0.367 4.999 3.265 5.136e-03 0.126 -2.109 HIST1H2BN histone cluster 1, H2bn 6 27914418 NM_003520 6p22-p21.3 Hs.534368 Hs.673851 18

nucleosome

DNA binding

nucleus

chromosome

nucleosome assembly

Systemic lupus erythematosus

226326_at -0.500 7.696 -3.264 5.146e-03 0.127 -2.111 PCGF5 polycomb group ring finger 5 10 92970348 AI798098 10q23.32 Hs.500512 9

protein binding

centrosome

zinc ion binding

regulation of transcription

metal ion binding

 
201260_s_at -0.619 9.542 -3.264 5.147e-03 0.127 -2.111 SYPL1 synaptophysin-like 1 7 -105518187, -105518187 NM_006754 7q22.3 Hs.80919 13

transporter activity

integral to plasma membrane

transport

synaptic transmission

synaptic vesicle

membrane

secretory granule

cytoplasmic vesicle

melanosome

 
230285_at -0.453 5.014 -3.264 5.155e-03 0.127 -2.113 SVIP small VCP/p97-interacting protein 11 -22800173 BF447829 11p14.2 Hs.349096 4

endoplasmic reticulum

Golgi apparatus

plasma membrane

 
208266_at 0.335 4.306 3.263 5.165e-03 0.127 -2.115 C8orf17 chromosome 8 open reading frame 17 8   NM_020237 8q24.3 Hs.283098 2

cytoplasm

endoplasmic reticulum

endoplasmic reticulum membrane

microsome

membrane

 
1553101_a_at -0.524 8.478 -3.262 5.170e-03 0.127 -2.116 ALKBH5 alkB, alkylation repair homolog 5 (E. coli) 17 18027591 NM_017758 17p11.2 Hs.462392 5

membrane

integral to membrane

 
203658_at 0.799 8.529 3.261 5.180e-03 0.127 -2.117 SLC25A20 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 3 -48869359 BC001689 3p21.31 Hs.13845 19

transporter activity

binding

mitochondrion

mitochondrial inner membrane

mitochondrial inner membrane

transport

carnitine shuttle

acyl carnitine transporter activity

membrane

integral to membrane

regulation of fatty acid oxidation

 
214314_s_at -0.371 6.510 -3.261 5.182e-03 0.127 -2.118 EIF5B eukaryotic translation initiation factor 5B 2 99320265 BE138647 2q11.2 Hs.158688 15

nucleotide binding

translation initiation factor activity

translation initiation factor activity

GTPase activity

protein binding

GTP binding

cytoplasm

translation

regulation of translational initiation

regulation of translational initiation

 
227945_at -0.827 7.217 -3.261 5.187e-03 0.127 -2.119 TBC1D1 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 4 37569114 BE882538 4p14 Hs.176503 15

GTPase activator activity

Rab GTPase activator activity

intracellular

nucleus

regulation of Rab GTPase activity

 
208841_s_at -0.614 9.625 -3.261 5.188e-03 0.127 -2.119 G3BP2 GTPase activating protein (SH3 domain) binding protein 2 4 -76786976, -76786976 AB014560 4q21.1 Hs.303676 15

nucleotide binding

RNA binding

protein binding

intracellular

cytoplasm

transport

cytoplasmic sequestering of NF-kappaB

Ras protein signal transduction

receptor signaling complex scaffold activity

mRNA transport

 
243344_at 0.304 5.288 3.260 5.190e-03 0.127 -2.119 LOC100130054 hypothetical LOC100130054 9   BE218142 9q21.12 Hs.207074      
201088_at -0.764 7.145 -3.260 5.192e-03 0.127 -2.119 KPNA2 karyopherin alpha 2 (RAG cohort 1, importin alpha 1) 17 63462309, -1713110 NM_002266 17q24.2 Hs.594238 125

regulation of DNA recombination

M phase specific microtubule process

G2 phase of mitotic cell cycle

protein binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

DNA metabolic process

NLS-bearing substrate import into nucleus

intracellular protein transport

nuclear localization sequence binding

protein transporter activity

interspecies interaction between organisms

 
235195_at -0.680 5.787 -3.260 5.193e-03 0.127 -2.120 FBXW2 F-box and WD repeat domain containing 2 9 -122559074 BG109988 9q34 Hs.494985 12

ubiquitin-protein ligase activity

protein binding

cytoplasm

protein modification process

proteolysis

modification-dependent protein catabolic process

 
213616_at 0.279 4.239 3.260 5.196e-03 0.127 -2.120 C18orf10 chromosome 18 open reading frame 10 18 -32630031 BF063896 18q12.2 Hs.695999 5

cytoplasm

cytoskeleton

microtubule

 
209943_at -0.880 5.450 -3.259 5.204e-03 0.127 -2.122 FBXL4 F-box and leucine-rich repeat protein 4 6 -99428321 AF176699 6q16.1-q16.3 Hs.536850 6

ubiquitin ligase complex

nucleus

cytoplasm

ubiquitin-dependent protein catabolic process

 
205909_at 0.420 4.225 3.259 5.207e-03 0.127 -2.122 POLE2 polymerase (DNA directed), epsilon 2 (p59 subunit) 14 -49180028 NM_002692 14q21-q22 Hs.162777 14

DNA binding

DNA-directed DNA polymerase activity

nucleus

nucleoplasm

DNA-dependent DNA replication

DNA repair

nucleotide-excision repair, DNA gap filling

transferase activity

nucleotidyltransferase activity

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

DNA replication

Base excision repair

Nucleotide excision repair

225210_s_at -0.437 8.367 -3.257 5.222e-03 0.127 -2.125 FAM103A1 family with sequence similarity 103, member A1 15 81445998 AW025216 15q25.2 Hs.80624 3    
221966_at 0.422 6.492 3.257 5.222e-03 0.127 -2.125 GPR137 G protein-coupled receptor 137 11 63809906 AA813194 11cen-q22.3 Hs.523763 4

membrane

integral to membrane

 
223124_s_at -0.424 8.444 -3.257 5.224e-03 0.127 -2.125 C1orf128 chromosome 1 open reading frame 128 1 23977462 AF271784 1p36.11 Hs.31819 4    
204194_at -0.677 5.949 -3.257 5.225e-03 0.127 -2.125 BACH1 BTB and CNC homology 1, basic leucine zipper transcription factor 1 21 29593090, 29593607, 29599430 NM_001186 21q22.11 Hs.154276 30

transcription factor activity

nucleus

nucleolus

cytosol

regulation of transcription, DNA-dependent

sequence-specific DNA binding

protein dimerization activity

 
223451_s_at 0.505 6.374 3.257 5.228e-03 0.127 -2.126 CKLF chemokine-like factor 16 65143966, 65143972 AF096895 16q21 Hs.15159 Hs.710181 12

extracellular region

extracellular space

chemotaxis

chemokine activity

cell proliferation

membrane

integral to membrane

neutrophil chemotaxis

secretion by cell

macrophage chemotaxis

lymphocyte chemotaxis

 
200732_s_at -0.582 10.872 -3.257 5.228e-03 0.127 -2.126 PTP4A1 protein tyrosine phosphatase type IVA, member 1 6 64339878 AL578310 6q12 Hs.227777 Hs.706850 28

protein tyrosine phosphatase activity

cytoplasm

early endosome

endoplasmic reticulum

spindle

plasma membrane

protein amino acid dephosphorylation

cell cycle

multicellular organismal development

hydrolase activity

 
214669_x_at 0.461 5.412 3.256 5.233e-03 0.127 -2.127 IGKC immunoglobulin kappa constant 2   BG485135 2p12 Hs.449621 Hs.703932 31

antigen binding

protein binding

extracellular region

extracellular region

immune response

 
1558077_s_at 0.268 4.430 3.256 5.238e-03 0.127 -2.128 MDH1B malate dehydrogenase 1B, NAD (soluble) 2 -207310733 BG202523 2q33.3 Hs.147816 1

binding

carbohydrate metabolic process

tricarboxylic acid cycle

malate metabolic process

oxidoreductase activity

malate dehydrogenase activity

oxidation reduction

 
211748_x_at 0.891 9.220 3.255 5.243e-03 0.127 -2.128 PTGDS prostaglandin D2 synthase 21kDa (brain) 9 138991776 BC005939 9q34.2-q34.3 Hs.446429 63

prostaglandin biosynthetic process

prostaglandin-D synthase activity

transporter activity

binding

retinoid binding

extracellular region

nucleus

cytoplasm

rough endoplasmic reticulum

Golgi apparatus

fatty acid biosynthetic process

transport

membrane

isomerase activity

nuclear membrane

regulation of circadian sleep/wake cycle, sleep

perinuclear region of cytoplasm

Arachidonic acid metabolism

Metabolic pathways

218552_at 0.430 8.683 3.254 5.253e-03 0.127 -2.130 ECHDC2 enoyl Coenzyme A hydratase domain containing 2 1 -53134491 NM_018281 1p32.3 Hs.476319 2

mitochondrion

lipid metabolic process

fatty acid metabolic process

metabolic process

lyase activity

 
222292_at 0.252 3.560 3.254 5.254e-03 0.127 -2.130 CD40 CD40 molecule, TNF receptor superfamily member 5 20 44180312 AW298127 20q12-q13.2 Hs.472860 290

receptor activity

extracellular region

plasma membrane

plasma membrane

integral to plasma membrane

protein complex assembly

inflammatory response

enzyme binding

platelet activation

B cell proliferation

positive regulation of I-kappaB kinase/NF-kappaB cascade

Cytokine-cytokine receptor interaction

Cell adhesion molecules (CAMs)

Toll-like receptor signaling pathway

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Primary immunodeficiency

219187_at -0.245 5.713 -3.254 5.257e-03 0.127 -2.131 FKBPL FK506 binding protein like 6 -32204461, -3503650 NM_022110 6p21.3 Hs.520042 7

binding

cellular_component

extracellular space

protein folding

JAK-STAT cascade

nervous system development

brain development

aging

response to radiation

basal plasma membrane

positive regulation of smooth muscle cell proliferation

advanced glycation end-product receptor activity

 
212738_at 0.312 5.907 3.254 5.259e-03 0.127 -2.131 ARHGAP19 Rho GTPase activating protein 19 10 -98971919 AV717623 10q24.1 Hs.80305 8

GTPase activator activity

intracellular

nucleus

signal transduction

 
226196_s_at 0.278 6.218 3.253 5.264e-03 0.127 -2.132 C14orf179 chromosome 14 open reading frame 179 14 75521848 AW827281 14q24.3 Hs.532626 5    
1569128_at -0.239 2.412 -3.253 5.265e-03 0.127 -2.132 C3orf38 chromosome 3 open reading frame 38 3 88281582 BC016013 3p11.1 Hs.476944 Hs.518099 2

apoptosis

 
223175_s_at -0.580 10.444 -3.253 5.266e-03 0.127 -2.133 FEM1A fem-1 homolog a (C. elegans) 19 4742727 BC004988 19p13.3 Hs.515082 9

ubiquitin-protein ligase activity

cytoplasm

modification-dependent protein catabolic process

regulation of ubiquitin-protein ligase activity

 
1554452_a_at 0.384 5.420 3.253 5.267e-03 0.127 -2.133 C7orf68 chromosome 7 open reading frame 68 7 127883119 BC001863 7q32.1 Hs.710088 9

molecular_function

cellular_component

response to stress

membrane

integral to membrane

 
219400_at 0.280 5.054 3.253 5.273e-03 0.127 -2.134 CNTNAP1 contactin associated protein 1 17 38088157 NM_003632 17q21 Hs.408730 10

receptor activity

SH3/SH2 adaptor activity

receptor binding

integral to plasma membrane

cell adhesion

signal transduction

membrane

SH3 domain binding

paranode region of axon

Cell adhesion molecules (CAMs)

225987_at 0.663 7.319 3.252 5.277e-03 0.127 -2.134 STEAP4 STEAP family member 4 7 -87743679 AA650281 7q21.12 Hs.521008 7

binding

iron ion binding

copper ion binding

Golgi apparatus

plasma membrane

ion transport

iron ion transport

electron carrier activity

integral to membrane

oxidoreductase activity

fat cell differentiation

metal ion binding

FAD binding

oxidation reduction

 
217712_at 0.264 2.135 3.252 5.279e-03 0.127 -2.135 LOC389906 similar to Serine/threonine-protein kinase PRKX (Protein kinase PKX1) X   AA479678 Xp22.33 Hs.636199 Hs.684492 1    
235616_at 0.317 4.398 3.252 5.284e-03 0.127 -2.136 TSHZ2 teashirt zinc finger homeobox 2 20 51022283 AI694059 20q13.2 Hs.271605 Hs.473117 Hs.649877 6

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

sequence-specific DNA binding

metal ion binding

 
203862_s_at -0.658 11.013 -3.251 5.288e-03 0.127 -2.136 ACTN2 actinin, alpha 2 1 234916392 H16245 1q42-q43 Hs.498178 57

actin binding

integrin binding

calcium ion binding

nucleolus

cytoplasm

cytoskeleton

actin filament

focal adhesion

muscle contraction

cell adhesion

structural constituent of muscle

Z disc

microspike assembly

filopodium

thyroid hormone receptor coactivator activity

pseudopodium

titin binding

identical protein binding

regulation of apoptosis

dendritic spine

protein dimerization activity

focal adhesion formation

protein homotetramerization

ZASP binding

FATZ 1 binding

titin Z domain binding

Focal adhesion

Adherens junction

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Systemic lupus erythematosus

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

212686_at 0.875 4.046 3.251 5.296e-03 0.128 -2.138 PPM1H protein phosphatase 1H (PP2C domain containing) 12 -61324030 AB032983 12q14.1-q14.2 Hs.435479 5

phosphoprotein phosphatase activity

hydrolase activity

 
228256_s_at 0.428 5.578 3.250 5.297e-03 0.128 -2.138 EPB41L4A erythrocyte membrane protein band 4.1 like 4A 5 -111526213 AU144565 5q22.1-q22.2 Hs.584954 7

binding

cellular_component

cytoplasm

cytoskeleton

cytoskeletal protein binding

biological_process

extrinsic to membrane

 
225806_at 0.530 3.152 3.250 5.301e-03 0.128 -2.139 JUB jub, ajuba homolog (Xenopus laevis) 14 -22510249, -22510249 AI289311 14q11.2 Hs.655832 16

protein binding

nucleus

cytoplasm

centrosome

cytoskeleton

plasma membrane

focal adhesion

cell cycle

cell adhesion

zinc ion binding

lamellipodium

lamellipodium assembly

cell junction

regulation of cell migration

wound healing, spreading of epidermal cells

regulation of GTPase activity

metal ion binding

focal adhesion formation

 
1557165_s_at 0.680 8.697 3.249 5.313e-03 0.128 -2.141 KLHL18 kelch-like 18 (Drosophila) 3 47299333 BM141828 3p21.31 Hs.517946 8

protein binding

 
225626_at 0.629 5.361 3.248 5.319e-03 0.128 -2.142 PAG1 phosphoprotein associated with glycosphingolipid microdomains 1 8 -82042600 AK000680 8q21.13 Hs.266175 14

SH3/SH2 adaptor activity

protein binding

plasma membrane

plasma membrane

immune response

intracellular signaling cascade

integral to membrane

SH2 domain binding

membrane raft

negative regulation of T cell activation

 
212187_x_at 0.904 8.867 3.248 5.327e-03 0.128 -2.143 PTGDS prostaglandin D2 synthase 21kDa (brain) 9 138991776 NM_000954 9q34.2-q34.3 Hs.446429 63

prostaglandin biosynthetic process

prostaglandin-D synthase activity

transporter activity

binding

retinoid binding

extracellular region

nucleus

cytoplasm

rough endoplasmic reticulum

Golgi apparatus

fatty acid biosynthetic process

transport

membrane

isomerase activity

nuclear membrane

regulation of circadian sleep/wake cycle, sleep

perinuclear region of cytoplasm

Arachidonic acid metabolism

Metabolic pathways

243318_at -0.349 6.640 -3.247 5.332e-03 0.128 -2.144 DCAF8 DDB1 and CUL4 associated factor 8 1 -158475636, -158475636, -158452128, -158452128 AI208342 1q22-q23 Hs.632447 10

protein binding

 
232524_x_at -0.381 6.754 -3.247 5.337e-03 0.128 -2.145 ANAPC4 anaphase promoting complex subunit 4 4 24987945 AK001881 4p15.2 Hs.152173 21

G2/M transition of mitotic cell cycle

mitotic anaphase

ubiquitin-protein ligase activity

nucleoplasm

anaphase-promoting complex

cytosol

ubiquitin-dependent protein catabolic process

cell cycle

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

cell division

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

204274_at -0.405 9.014 -3.246 5.342e-03 0.128 -2.146 EBAG9 estrogen receptor binding site associated, antigen, 9 8 110621104, 110621485 AA812215 8q23 Hs.409368 55

regulation of cell growth

soluble fraction

Golgi apparatus

plasma membrane

focal adhesion

apoptosis

integral to membrane

apoptotic protease activator activity

 
202303_x_at -0.476 5.846 -3.246 5.345e-03 0.128 -2.146 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 4 144654065 NM_003601 4q31.1-q31.2 Hs.558422 Hs.710623 37

nucleotide binding

condensed chromosome

DNA binding

RNA polymerase II transcription factor activity

helicase activity

ATP binding

nucleus

nucleoplasm

nucleolus

chromatin assembly or disassembly

nucleosome assembly

transcription initiation

regulation of transcription from RNA polymerase II promoter

embryonic development

transcription activator activity

nucleosome positioning

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

ATPase activity

RSF complex

nucleosome binding

histone binding

ATP-dependent chromatin remodeling

 
203450_at 0.322 7.581 3.245 5.352e-03 0.128 -2.147 CBY1 chibby homolog 1 (Drosophila) 22 37382603 NM_015373 22q12 Hs.334911 Hs.596584 20

nucleus

Golgi apparatus

trans-Golgi network

beta-catenin binding

protein localization

nuclear speck

negative regulation of Wnt receptor signaling pathway

negative regulation of Wnt receptor signaling pathway

identical protein binding

fat cell differentiation

negative regulation of transcription, DNA-dependent

cardiac muscle cell differentiation

 
236247_at 0.289 5.933 3.244 5.365e-03 0.128 -2.150 NSUN4 NOL1/NOP2/Sun domain family, member 4 1 46578976 AI536692 1p34 Hs.163424 4

methyltransferase activity

transferase activity

 
243108_at -0.360 3.464 -3.244 5.368e-03 0.128 -2.150 RANBP9 RAN binding protein 9 6 -13729708 AW297762 6p23 Hs.708182 37

nucleus

cytoplasm

microtubule associated complex

protein complex assembly

microtubule nucleation

Ran GTPase binding

enzyme binding

 
230009_at -0.463 6.502 -3.243 5.376e-03 0.128 -2.152 FAM118B family with sequence similarity 118, member B 11 125586828 AI936072 11q24.2 Hs.276315 2    
225240_s_at -0.506 7.880 -3.243 5.378e-03 0.128 -2.152 MSI2 musashi homolog 2 (Drosophila) 17 52688929, 52689372 BE220026 17q22 Hs.658922 7

nucleotide binding

RNA binding

cytoplasm

 
203824_at -2.048 8.236 -3.243 5.380e-03 0.128 -2.152 TSPAN8 tetraspanin 8 12 -69805143 NM_004616 12q14.1-q21.1 Hs.170563 23

signal transducer activity

lysosome

protein amino acid glycosylation

membrane

integral to membrane

 
210007_s_at -0.521 4.688 -3.243 5.381e-03 0.128 -2.152 GPD2 glycerol-3-phosphate dehydrogenase 2 (mitochondrial) 2 157000210, 157001145 U36310 2q24.1 Hs.512382 20

glycerol-3-phosphate dehydrogenase activity

calcium ion binding

mitochondrion

mitochondrial inner membrane

glycerol-3-phosphate metabolic process

gluconeogenesis

glycerol-3-phosphate dehydrogenase complex

oxidoreductase activity

oxidation reduction

Glycerophospholipid metabolism

201843_s_at 0.876 4.757 3.242 5.384e-03 0.128 -2.153 EFEMP1 EGF-containing fibulin-like extracellular matrix protein 1 2 -55946605, -55946605 NM_004105 2p16 Hs.76224 31

calcium ion binding

protein binding

extracellular region

proteinaceous extracellular matrix

visual perception

 
209124_at 0.397 6.129 3.242 5.387e-03 0.128 -2.154 MYD88 myeloid differentiation primary response gene (88) 3 38154972 U70451 3p22 Hs.82116 98

response to molecule of fungal origin

MyD88-dependent toll-like receptor signaling pathway

transmembrane receptor activity

Toll binding

death receptor binding

protein binding

cytoplasm

inflammatory response

Toll signaling pathway

response to virus

immunoglobulin mediated immune response

cytokine-mediated signaling pathway

intrinsic to membrane

lipopolysaccharide-mediated signaling pathway

response to lipopolysaccharide

positive regulation of tumor necrosis factor production

regulation of cell proliferation

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of chemokine biosynthetic process

innate immune response

type I interferon biosynthetic process

positive regulation of transcription from RNA polymerase II promoter

positive regulation of JNK cascade

positive regulation of smooth muscle cell proliferation

positive regulation of NF-kappaB transcription factor activity

Apoptosis

Toll-like receptor signaling pathway

240728_at 0.268 4.796 3.242 5.394e-03 0.128 -2.155 PLCB4 phospholipase C, beta 4 20 9024931 AI224105 20p12 Hs.472101 17

phosphoinositide phospholipase C activity

signal transducer activity

calcium ion binding

protein binding

intracellular signaling cascade

lipid catabolic process

hydrolase activity

Inositol phosphate metabolism

Metabolic pathways

Calcium signaling pathway

Chemokine signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Wnt signaling pathway

Gap junction

Long-term potentiation

Long-term depression

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Huntington's disease

222997_s_at 0.459 8.468 3.242 5.395e-03 0.128 -2.155 MRPS21 mitochondrial ribosomal protein S21 1 148532892 BC004566 1q21 Hs.405880 8

structural constituent of ribosome

intracellular

mitochondrion

mitochondrial small ribosomal subunit

ribosome

translation

 
200602_at 0.501 7.371 3.241 5.399e-03 0.128 -2.156 APP amyloid beta (A4) precursor protein 21 -26174732 NM_000484 21q21.2 21q21.3 Hs.434980 835

serine-type endopeptidase inhibitor activity

serine-type endopeptidase inhibitor activity

iron ion binding

copper ion binding

extracellular region

extracellular region

cytoplasm

Golgi apparatus

plasma membrane

integral to plasma membrane

coated pit

cellular copper ion homeostasis

endocytosis

cell adhesion

Notch signaling pathway

heparin binding

cell death

zinc ion binding

cell surface

peptidase inhibitor activity

platelet alpha granule lumen

acetylcholine receptor binding

identical protein binding

metal ion binding

neuromuscular process

neuron apoptosis

Alzheimer's disease

212431_at 0.307 7.127 3.241 5.404e-03 0.128 -2.156 HMGXB3 HMG box domain containing 3 5 149360361 D83778 5q32 Hs.719189 8

DNA binding

cellular_component

nucleus

nucleolus

biological_process

kinase activity

 
202738_s_at -0.724 8.619 -3.241 5.405e-03 0.128 -2.157 PHKB phosphorylase kinase, beta 16 46052710 BG149218 16q12-q13 Hs.78060 13

catalytic activity

calmodulin binding

plasma membrane

carbohydrate metabolic process

glycogen metabolic process

generation of precursor metabolites and energy

Calcium signaling pathway

Insulin signaling pathway

224937_at 0.718 4.284 3.240 5.410e-03 0.128 -2.157 PTGFRN prostaglandin F2 receptor negative regulator 1 117254211 BF311866 1p13.1 Hs.418093 14

protein binding

endoplasmic reticulum

Golgi apparatus

membrane

integral to membrane

 
206167_s_at -0.906 7.674 -3.240 5.411e-03 0.128 -2.158 ARHGAP6 Rho GTPase activating protein 6 X -11071437, -11065583, -11065583 NM_001174 Xp22.3 Hs.435291 6

SH3/SH2 adaptor activity

GTPase activator activity

Rho GTPase activator activity

intracellular

cytoplasm

actin filament

actin filament organization

signal transduction

Rho protein signal transduction

SH3 domain binding

actin filament polymerization

regulation of GTPase activity

negative regulation of stress fiber formation

negative regulation of focal adhesion formation

 
201535_at -0.448 9.068 -3.240 5.412e-03 0.128 -2.158 UBL3 ubiquitin-like 3 13 -29236545 NM_007106 13q12-q13 Hs.145575 12

intracellular

plasma membrane

 
224874_at -0.497 7.384 -3.240 5.415e-03 0.128 -2.158 POLR1D polymerase (RNA) I polypeptide D, 16kDa 13 27094002, 27094028 N32181 13q12.2 Hs.507584 15

DNA binding

DNA-directed RNA polymerase activity

nucleus

nucleoplasm

transcription

protein dimerization activity

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

238337_s_at -0.490 8.666 -3.240 5.415e-03 0.128 -2.158 DNAJC21 DnaJ (Hsp40) homolog, subfamily C, member 21 5 34965454 BF678298 5p13.2 Hs.131887 5

nucleic acid binding

intracellular

zinc ion binding

heat shock protein binding

metal ion binding

 
205898_at 0.713 6.220 3.240 5.416e-03 0.128 -2.158 CX3CR1 chemokine (C-X3-C motif) receptor 1 3 -39279988 U20350 3p21 3p21.3 Hs.78913 123

receptor activity

G-protein coupled receptor activity

chemokine receptor activity

protein binding

plasma membrane

integral to plasma membrane

chemotaxis

cellular defense response

cell adhesion

signal transduction

G-protein coupled receptor protein signaling pathway

response to wounding

interspecies interaction between organisms

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

209138_x_at 0.722 4.901 3.239 5.420e-03 0.128 -2.159 IGL@ immunoglobulin lambda locus 22   M87790 22q11.1-q11.2 Hs.449585 Hs.561078 20    
230000_at -0.420 4.654 -3.239 5.422e-03 0.128 -2.159 RNF213 ring finger protein 213 17 75928320 AI523817 17q25.3 Hs.195642 Hs.657519 6

nucleotide binding

protein binding

zinc ion binding

nucleoside-triphosphatase activity

metal ion binding

 
227646_at 0.557 6.777 3.239 5.426e-03 0.129 -2.160 EBF1 early B-cell factor 1 5 -158055500 BG435302 5q34 Hs.573143 21

DNA binding

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

transcription regulator activity

metal ion binding

 
228163_at 0.281 5.676 3.238 5.431e-03 0.129 -2.161 ST6GALNAC4 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 9 -129709985 BE858453 9q34 Hs.3972 Hs.709827 13

soluble fraction

nucleus

Golgi apparatus

protein amino acid glycosylation

glycolipid metabolic process

membrane

integral to membrane

integral to Golgi membrane

(alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,3)-N-acetyl-galactosaminide 6-alpha-sialyltransferase activity

Glycosphingolipid biosynthesis - ganglio series

Metabolic pathways

210938_at 0.418 4.491 3.238 5.438e-03 0.129 -2.162 PDX1 pancreatic and duodenal homeobox 1 13 27392167 U30329 13q12.1 Hs.32938 86

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

specific RNA polymerase II transcription factor activity

protein binding

nucleus

glucose metabolic process

generation of precursor metabolites and energy

nitric oxide mediated signal transduction

multicellular organismal development

positive regulation of cell proliferation

negative regulation of cell proliferation

organ morphogenesis

morphogenesis of embryonic epithelium

transcription activator activity

insulin secretion

cell differentiation

exocrine pancreas development

endocrine pancreas development

glucose homeostasis

sequence-specific DNA binding

intracellular part

positive regulation of transcription from RNA polymerase II promoter

Type II diabetes mellitus

Maturity onset diabetes of the young

201311_s_at 0.459 6.204 3.238 5.438e-03 0.129 -2.162 SH3BGRL SH3 domain binding glutamic acid-rich protein like X 80343958 AL515318 Xq13.3 Hs.108029 13

SH3/SH2 adaptor activity

nucleus

cytoplasm

SH3 domain binding

 
214884_at -0.247 3.183 -3.237 5.441e-03 0.129 -2.163 MCF2 MCF.2 cell line derived transforming sequence X -138491595, -138491595 AL033403 Xq27 Hs.387262 24

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

protein binding

intracellular

membrane fraction

cytoplasm

cytosol

cytoskeleton

intracellular signaling cascade

membrane

regulation of Rho protein signal transduction

 
228039_at -0.470 7.700 -3.237 5.447e-03 0.129 -2.164 DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 5 134122359 AI765169 5q31.1 Hs.406549 9

nucleotide binding

RNA binding

helicase activity

ATP binding

nucleus

mRNA processing

ATP-dependent helicase activity

RNA splicing

Cajal body

nuclear speck

hydrolase activity

 
235215_at -0.406 5.609 -3.236 5.456e-03 0.129 -2.165 ERCC4 excision repair cross-complementing rodent repair deficiency, complementation group 4 16 13921514 AI694544 16p13.12 Hs.567265 88

nucleotide-excision repair complex

magnesium ion binding

nucleotide-excision repair, DNA damage removal

double-strand break repair via homologous recombination

nuclear chromosome, telomeric region

damaged DNA binding

single-stranded DNA binding

endodeoxyribonuclease activity

nucleus

nucleoplasm

nucleotide-excision repair, DNA incision, 3'-to lesion

nucleotide-excision repair, DNA incision, 5'-to lesion

response to DNA damage stimulus

protein C-terminus binding

response to UV

telomere maintenance via telomere shortening

hydrolase activity

negative regulation of telomere maintenance

protein N-terminus binding

Nucleotide excision repair

223629_at -0.428 4.087 -3.236 5.461e-03 0.129 -2.166 PCDHB5 protocadherin beta 5 5 140494983 BC001186 5q31 Hs.119693 11

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

synaptic transmission

synaptogenesis

integral to membrane

calcium-dependent cell-cell adhesion

 
205488_at 0.363 3.903 3.236 5.462e-03 0.129 -2.166 GZMA granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3) 5 54434230 NM_006144 5q11-q12 Hs.90708 39

immunological synapse

serine-type endopeptidase activity

extracellular region

nucleus

proteolysis

apoptosis

cleavage of lamin

immune response

peptidase activity

cytolysis

protein homodimerization activity

Neuroactive ligand-receptor interaction

209122_at 0.531 8.438 3.235 5.469e-03 0.129 -2.168 PLIN2 perilipin 2 9 -19105758 BC005127 9p22.1 Hs.3416 31

protein binding

extracellular region

nucleus

cytoplasm

endoplasmic reticulum

lipid particle

plasma membrane

long-chain fatty acid transport

lipid storage

 
214459_x_at 0.556 9.815 3.235 5.472e-03 0.129 -2.168 HLA-C major histocompatibility complex, class I, C 6 -31344507, -2686290, -2483726 M12679 6p21.3 Hs.654404 Hs.656020 Hs.77961 521

antigen processing and presentation of peptide antigen via MHC class I

extracellular region

plasma membrane

integral to plasma membrane

immune response

immune response

membrane

integral to membrane

antigen processing and presentation

MHC class I receptor activity

MHC class I protein complex

interspecies interaction between organisms

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

232913_at 0.260 5.067 3.234 5.475e-03 0.129 -2.168 TMED8 transmembrane emp24 protein transport domain containing 8 14 -76877866 AC007954 14q24.3 Hs.200413 Hs.26403 6    
209522_s_at 0.492 9.483 3.232 5.497e-03 0.129 -2.172 CRAT carnitine acetyltransferase 9 -130896895, -130896893 BC000723 9q34.1 Hs.12068 10

carnitine O-acetyltransferase activity

mitochondrion

mitochondrial inner membrane

peroxisome

endoplasmic reticulum

lipid metabolic process

fatty acid metabolic process

transport

acyltransferase activity

energy derivation by oxidation of organic compounds

membrane

transferase activity

 
218428_s_at 0.478 8.206 3.232 5.497e-03 0.129 -2.172 REV1 REV1 homolog (S. cerevisiae) 2 -99383369 NM_016316 2q11.1-q11.2 Hs.443077 27

magnesium ion binding

damaged DNA binding

DNA-directed DNA polymerase activity

protein binding

intracellular

nucleus

DNA replication

DNA repair

response to DNA damage stimulus

response to UV

transferase activity

deoxycytidyl transferase activity

error-prone postreplication DNA repair

 
244783_at -0.292 2.576 -3.232 5.498e-03 0.129 -2.172 YAF2 YY1 associated factor 2 12 -40837173 R56794 12q12 Hs.708084 9

transcription coactivator activity

transcription corepressor activity

protein binding

intracellular

nucleus

zinc ion binding

negative regulation of transcription

positive regulation of transcription

metal ion binding

 
227320_at 0.451 6.014 3.232 5.503e-03 0.129 -2.173 FAM101A family with sequence similarity 101, member A 12 123339662 AW264333 12q24.31 Hs.432901 3    
213521_at 0.343 6.700 3.231 5.514e-03 0.129 -2.175 PTPN18 protein tyrosine phosphatase, non-receptor type 18 (brain-derived) 2 130830049 AW575379 2q21.1 Hs.516390 Hs.591549 16

non-membrane spanning protein tyrosine phosphatase activity

nucleus

cytoplasm

protein amino acid dephosphorylation

hydrolase activity

 
206976_s_at -0.649 8.022 -3.231 5.516e-03 0.129 -2.175 HSPH1 heat shock 105kDa/110kDa protein 1 13 -30608762 NM_006644 13q12.3 Hs.36927 25

nucleotide binding

ATP binding

cytoplasm

response to unfolded protein

 
213113_s_at 0.427 5.474 3.231 5.518e-03 0.129 -2.176 SLC43A3 solute carrier family 43, member 3 11 -56931002, -56931002, -56931002 AI630178 11q11 Hs.99962 4

membrane

integral to membrane

 
203300_x_at -0.550 8.711 -3.230 5.522e-03 0.129 -2.176 AP1S2 adaptor-related protein complex 1, sigma 2 subunit X -15753849 NM_003916 Xp22.2 Hs.653504 Hs.656471 21

protein binding

Golgi apparatus

cytosol

coated pit

intracellular protein transport

endocytosis

protein transporter activity

membrane

clathrin coat of trans-Golgi network vesicle

clathrin adaptor complex

cytoplasmic vesicle

Lysosome

226475_at 0.348 6.394 3.229 5.531e-03 0.130 -2.178 FAM118A family with sequence similarity 118, member A 22 44083744, 44084448 AI650582 22q13 Hs.265018 6

membrane

integral to membrane

 
238529_at 0.344 4.161 3.229 5.534e-03 0.130 -2.178 LOC730631 hypothetical LOC730631 1   AA573088 1q21.2 Hs.528615      
209496_at 0.412 6.304 3.229 5.537e-03 0.130 -2.179 RARRES2 retinoic acid receptor responder (tazarotene induced) 2 7 -149666340 BC000069 7q36.1 Hs.647064 22

retinoid metabolic process

molecular_function

extracellular region

brown fat cell differentiation

 
239230_at 0.250 3.366 3.228 5.544e-03 0.130 -2.180 HES5 hairy and enhancer of split 5 (Drosophila) 1 -2450045 AW079166 1p36.32 Hs.57971 12

DNA binding

nucleus

regulation of transcription, DNA-dependent

cell adhesion

multicellular organismal development

nervous system development

positive regulation of specific transcription from RNA polymerase II promoter

negative regulation of specific transcription from RNA polymerase II promoter

cell differentiation

transcription regulator activity

auditory receptor cell differentiation

auditory receptor cell fate determination

negative regulation of neuron differentiation

cell maturation

regulation of neurogenesis

Notch signaling pathway

202538_s_at -0.470 7.071 -3.228 5.545e-03 0.130 -2.180 CHMP2B chromatin modifying protein 2B 3 87359102 NM_014043 3p11.2 Hs.476930 36

intracellular

cytoplasm

endosome

cytosol

protein transport

membrane

protein domain specific binding

Endocytosis

203409_at 0.373 5.218 3.228 5.552e-03 0.130 -2.181 DDB2 damage-specific DNA binding protein 2, 48kDa 11 47193068 NM_000107 11p12-p11 Hs.700338 52

protein polyubiquitination

nucleotide-excision repair, DNA damage removal

damaged DNA binding

ubiquitin-protein ligase activity

protein binding

nucleus

nucleoplasm

pyrimidine dimer repair

response to DNA damage stimulus

response to UV

modification-dependent protein catabolic process

protein complex

protein autoubiquitination

Nucleotide excision repair

p53 signaling pathway

Ubiquitin mediated proteolysis

203661_s_at -0.417 8.860 -3.228 5.553e-03 0.130 -2.181 TMOD1 tropomodulin 1 9 99326257 BC002660 9q22.3 Hs.494595 18

actin binding

tropomyosin binding

nucleus

cytoplasm

membrane

myofibril

myofibril assembly

cortical cytoskeleton

 
224525_s_at -0.859 5.580 -3.228 5.553e-03 0.130 -2.182 OLA1 Obg-like ATPase 1 2 -174645420 AL136546 2q31.1 Hs.157351 11

nucleotide binding

protein binding

ATP binding

GTP binding

intracellular

cytoplasm

ATP catabolic process

hydrolase activity

 
202555_s_at 0.720 6.203 3.227 5.554e-03 0.130 -2.182 MYLK myosin light chain kinase 3 -124813832, -124813832 NM_005965 3q21 Hs.477375 56

nucleotide binding

magnesium ion binding

actin binding

myosin light chain kinase activity

calcium ion binding

calmodulin binding

ATP binding

protein amino acid phosphorylation

transferase activity

Calcium signaling pathway

Vascular smooth muscle contraction

Focal adhesion

Regulation of actin cytoskeleton

209004_s_at 0.362 10.040 3.227 5.554e-03 0.130 -2.182 FBXL5 F-box and leucine-rich repeat protein 5 4 -15215251 AF142481 4p15.32 Hs.643433 13

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

protein ubiquitination

modification-dependent protein catabolic process

 
214764_at -0.700 6.634 -3.227 5.558e-03 0.130 -2.182 RRP15 ribosomal RNA processing 15 homolog (S. cerevisiae) 1 216525251 AW029169 1q41 Hs.660109 8

protein binding

 
205633_s_at 0.993 8.371 3.227 5.558e-03 0.130 -2.182 ALAS1 aminolevulinate, delta-, synthase 1 3 52207155, 52207183 NM_000688 3p21.1 Hs.476308 24

5-aminolevulinate synthase activity

mitochondrion

mitochondrial matrix

heme biosynthetic process

acyltransferase activity

transferase activity, transferring nitrogenous groups

pyridoxal phosphate binding

tetrapyrrole biosynthetic process

Glycine, serine and threonine metabolism

Porphyrin and chlorophyll metabolism

Metabolic pathways

226818_at 0.800 4.565 3.227 5.561e-03 0.130 -2.183 MPEG1 macrophage expressed 1 11 -58732558 T64884 11q12.1 Hs.718450 4

membrane

integral to membrane

 
239741_at -0.829 5.578 -3.227 5.562e-03 0.130 -2.183 LOC283658 hypothetical protein LOC283658 15   AA233912 15q21.1 Hs.87194 1    
209455_at -0.367 7.651 -3.227 5.562e-03 0.130 -2.183 FBXW11 F-box and WD repeat domain containing 11 5 -171221160 BE963245 5q35.1 Hs.484138 14

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

cytoplasm

Wnt receptor signaling pathway

protein ubiquitination

modification-dependent protein catabolic process

Ubiquitin mediated proteolysis

Wnt signaling pathway

Hedgehog signaling pathway

203543_s_at -0.969 7.801 -3.227 5.564e-03 0.130 -2.183 KLF9 Kruppel-like factor 9 9 -72189332 NM_001206 9q13 Hs.150557 Hs.602267 19

transcription factor activity

intracellular

nucleus

regulation of transcription from RNA polymerase II promoter

embryo implantation

zinc ion binding

regulation of transcription

metal ion binding

progesterone receptor signaling pathway

 
228035_at 0.333 5.211 3.226 5.571e-03 0.130 -2.185 STK33 serine/threonine kinase 33 11 -8369993 AA453640 11p15.3 Hs.501833 8

nucleotide binding

protein serine/threonine kinase activity

ATP binding

nucleus

cytoplasm

Golgi apparatus

protein amino acid phosphorylation

transferase activity

perinuclear region of cytoplasm

 
1561206_at -0.398 3.991 -3.226 5.573e-03 0.130 -2.185 KLHL8 kelch-like 8 (Drosophila) 4 -88301237 BC041370 4q22.1 Hs.106601 Hs.715202 9

protein binding

 
202207_at 1.144 4.276 3.226 5.574e-03 0.130 -2.185 ARL4C ADP-ribosylation factor-like 4C 2 -235066424 BG435404 2q37.1 Hs.111554 Hs.719190 7

nucleotide binding

GTPase activity

GTP binding

intracellular

nucleus

small GTPase mediated signal transduction

 
224758_at -0.340 4.495 -3.225 5.577e-03 0.130 -2.185 PL-5283 PL-5283 protein 7 134997760 BG393032 7q33 Hs.200022 3    
235164_at -0.456 6.484 -3.225 5.581e-03 0.130 -2.186 ZNF25 zinc finger protein 25 10 -38278800 BG433539 10p11.1 Hs.499429 8

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
209363_s_at -0.621 6.747 -3.225 5.582e-03 0.130 -2.186 MED21 mediator complex subunit 21 12 27066749 U46837 12p11.23 Hs.286145 27

blastocyst development

RNA polymerase II transcription factor activity

transcription coactivator activity

DNA-directed RNA polymerase activity

protein binding

nucleus

DNA-directed RNA polymerase II, core complex

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

 
224992_s_at 0.298 4.934 3.224 5.589e-03 0.130 -2.187 CMIP c-Maf-inducing protein 16 80036275, 80086454 AI363061 16q23 Hs.709248 7

nucleus

cytoplasm

 
200904_at 0.480 7.547 3.224 5.599e-03 0.130 -2.189 HLA-E major histocompatibility complex, class I, E 6 30565249, 1905841, 1704132 X56841 6p21.3 Hs.650174 126

antigen processing and presentation of peptide antigen via MHC class I

plasma membrane

immune response

integral to membrane

antigen processing and presentation

MHC class I receptor activity

MHC class I protein complex

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

227143_s_at 0.361 6.100 3.223 5.603e-03 0.130 -2.190 BID BH3 interacting domain death agonist 22 -16596905, -16596905 AA706658 22q11.1 Hs.591054 111

release of cytochrome c from mitochondria

death receptor binding

protein binding

membrane fraction

cytoplasm

mitochondrion

mitochondrial outer membrane

cytosol

cytosol

induction of apoptosis via death domain receptors

activation of pro-apoptotic gene products

membrane

regulation of mitochondrial membrane permeability

neuron apoptosis

p53 signaling pathway

Apoptosis

Natural killer cell mediated cytotoxicity

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

Pathways in cancer

223071_at -0.381 9.514 -3.223 5.604e-03 0.130 -2.190 IER3IP1 immediate early response 3 interacting protein 1 18 -42935410 AL136667 18q12 Hs.653122 9

endoplasmic reticulum

Golgi apparatus

membrane

integral to membrane

 
203487_s_at -0.458 8.120 -3.222 5.613e-03 0.130 -2.192 ARMC8 armadillo repeat containing 8 3 139388837, 139388837 NM_015396 3q22.3 Hs.719108 4

binding

 
236640_at 0.487 4.774 3.222 5.620e-03 0.130 -2.193 LOC399959 hypothetical LOC399959 11 -121465022 AI638169 11q24.1 Hs.44098 2    
1555886_at 0.483 6.268 3.222 5.620e-03 0.130 -2.193 PDSS2 prenyl (decaprenyl) diphosphate synthase, subunit 2 6 -107580453 BC029491 6q21 Hs.718509 9

trans-hexaprenyltranstransferase activity

ubiquinone biosynthetic process

isoprenoid biosynthetic process

transferase activity

protein heterodimerization activity

Terpenoid backbone biosynthesis

203359_s_at -0.551 6.336 -3.221 5.622e-03 0.130 -2.193 MYCBP c-myc binding protein 1 -39101222 AL525412 1p33-p32.2 Hs.591506 12

transcription coactivator activity

protein binding

nucleus

cytoplasm

mitochondrion

spermatogenesis

regulation of transcription

 
226596_x_at -0.887 6.794 -3.221 5.628e-03 0.130 -2.194 tcag7.903 hypothetical protein LOC729852 7   AK027125 7p21.3 Hs.652371 1    
201599_at -0.734 9.166 -3.220 5.641e-03 0.130 -2.196 OAT ornithine aminotransferase (gyrate atrophy) 10 -126075861 NM_000274 10q26 Hs.523332 28

ornithine-oxo-acid transaminase activity

protein binding

cytoplasm

mitochondrion

mitochondrial matrix

visual perception

transferase activity

pyridoxal phosphate binding

Arginine and proline metabolism

Metabolic pathways

219622_at 0.737 5.704 3.219 5.652e-03 0.131 -2.198 RAB20 RAB20, member RAS oncogene family 13 -109973413 NM_017817 13q34 Hs.719403 7

nucleotide binding

GTP binding

Golgi apparatus

small GTPase mediated signal transduction

protein transport

 
232458_at 0.552 5.150 3.219 5.655e-03 0.131 -2.198 COL3A1 collagen, type III, alpha 1 2 189547343 AU146808 2q31 Hs.443625 Hs.708235 130

integrin binding

integrin binding

extracellular matrix structural constituent

protein binding

extracellular region

collagen

collagen type III

collagen type III

extracellular space

extracellular space

cell-matrix adhesion

transforming growth factor beta receptor signaling pathway

integrin-mediated signaling pathway

heart development

response to radiation

peptide cross-linking

platelet activation

collagen fibril organization

collagen fibril organization

collagen biosynthetic process

collagen biosynthetic process

response to cytokine stimulus

wound healing

wound healing

fibril organization

skin development

platelet-derived growth factor binding

negative regulation of immune response

Focal adhesion

ECM-receptor interaction

203369_x_at -0.439 7.046 -3.219 5.655e-03 0.131 -2.198 PDLIM7 PDZ and LIM domain 7 (enigma) 5 -176849852, -176843000 AI825846 5q35.3 Hs.533040 22

ossification

protein binding

cytoplasm

cytoskeleton

receptor-mediated endocytosis

multicellular organismal development

zinc ion binding

cell differentiation

metal ion binding

 
233898_s_at -0.463 7.734 -3.218 5.668e-03 0.131 -2.201 FGFR1OP2 FGFR1 oncogene partner 2 12 26982582 AL117545 12p11.23 Hs.591162 5

cytoplasm

 
223585_x_at -0.765 5.827 -3.217 5.672e-03 0.131 -2.201 KBTBD2 kelch repeat and BTB (POZ) domain containing 2 7 -32874302 AF151831 7p14.3 Hs.372541 4

protein binding

 
228149_at -0.503 5.522 -3.217 5.672e-03 0.131 -2.201 C7orf60 chromosome 7 open reading frame 60 7 -112246437 BF432926 7q31.1 Hs.489734 4    
224518_s_at 0.575 4.385 3.217 5.672e-03 0.131 -2.201 ZNF559 zinc finger protein 559 19 9295927 BC006436 19p13.2 Hs.655107 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1552789_at -0.444 4.295 -3.217 5.675e-03 0.131 -2.202 SEC62 SEC62 homolog (S. cerevisiae) 3 171167273 NM_153039 3q26.2 Hs.622596 10

receptor activity

endoplasmic reticulum

cytoskeleton

cotranslational protein targeting to membrane

protein transporter activity

protein transport

membrane

integral to membrane

intracellular protein transmembrane transport

 
219419_at -0.399 6.838 -3.216 5.691e-03 0.131 -2.204 C18orf22 chromosome 18 open reading frame 22 18 75895345 NM_024805 18q23 Hs.593610 3

mitochondrion

rRNA processing

 
1565765_x_at 0.232 3.379 3.214 5.706e-03 0.131 -2.207 C13orf33 chromosome 13 open reading frame 33 13 30378311 AL832478 13q12.3 Hs.646647 Hs.708377 4    
213523_at 0.303 5.997 3.214 5.713e-03 0.131 -2.208 CCNE1 cyclin E1 19 34994740, 34995400 AI671049 19q12 Hs.244723 144

G1/S transition of mitotic cell cycle

transcription coactivator activity

protein binding

nucleus

nucleoplasm

cytosol

cell cycle

androgen receptor signaling pathway

positive regulation of transcription, DNA-dependent

androgen receptor binding

cell division

Cell cycle

p53 signaling pathway

Pathways in cancer

Prostate cancer

Small cell lung cancer

229794_at 0.560 4.663 3.213 5.725e-03 0.132 -2.210 ZNF585A zinc finger protein 585A 19 -42332840, -42332840 BE550717 19q13.12 Hs.390568 Hs.659236 3

nucleic acid binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
211069_s_at -0.218 9.470 -3.212 5.729e-03 0.132 -2.210 SUMO1 SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae) 2 -202779147 BC006462 2q33 Hs.596171 Hs.81424 228

protein binding

nucleus

nuclear pore

cytoplasm

DNA repair

membrane

negative regulation of transcription

negative regulation of transcription

PML body

nuclear speck

protein sumoylation

modification-dependent protein catabolic process

positive regulation of protein complex assembly

nuclear membrane

regulation of protein localization

negative regulation of transcription factor activity

 
225396_at -0.553 5.767 -3.212 5.733e-03 0.132 -2.211 RBBP4 retinoblastoma binding protein 4 1 32889335, 32889545 AI928212 1p35.1 Hs.16003 70

nucleus

DNA replication

chromatin remodeling

cell cycle

DNA-dependent ATPase activity

negative regulation of cell proliferation

Sin3 complex

NuRD complex

histone binding

histone deacetylase binding

regulation of transcription

 
222479_s_at -0.366 8.021 -3.212 5.737e-03 0.132 -2.212 DYNC1LI1 dynein, cytoplasmic 1, light intermediate chain 1 3 -32542470 AK001081 3p22.3 Hs.529495 11

nucleotide binding

motor activity

ATP binding

microtubule

dynein complex

 
211763_s_at -0.716 9.793 -3.211 5.740e-03 0.132 -2.212 UBE2B ubiquitin-conjugating enzyme E2B (RAD6 homolog) 5 133734768 BC005979 5q23-q31 Hs.615284 Hs.644421 23

nucleotide binding

protein polyubiquitination

chromatin

ubiquitin-protein ligase activity

ubiquitin-protein ligase activity

protein binding

ATP binding

nucleus

replication fork

cytoplasm

plasma membrane

postreplication repair

postreplication repair

ubiquitin-dependent protein catabolic process

ubiquitin-dependent protein catabolic process

protein monoubiquitination

response to DNA damage stimulus

spermatogenesis

sperm axoneme assembly

response to UV

ligase activity

ubiquitin protein ligase binding

histone H2A ubiquitination

response to drug

protein stabilization

regulation of protein metabolic process

protein autoubiquitination

Wnt receptor signaling pathway through beta-catenin

Ubiquitin mediated proteolysis

211833_s_at 0.364 3.869 3.211 5.740e-03 0.132 -2.212 BAX BCL2-associated X protein 19 54149928, 54149928, 54149928 U19599 19q13.3-q13.4 Hs.624291 448

B cell apoptosis

B cell apoptosis

release of cytochrome c from mitochondria

cytoplasm

mitochondrion

mitochondrial outer membrane

mitochondrial permeability transition pore complex

endoplasmic reticulum

endoplasmic reticulum membrane

cytosol

cytosol

DNA fragmentation involved in apoptosis

cleavage of lamin

transformed cell apoptosis

mitochondrial fusion

lipid binding

induction of apoptosis by extracellular signals

induction of apoptosis by intracellular signals

negative regulation of survival gene product expression

activation of caspase activity by cytochrome c

response to toxin

establishment or maintenance of transmembrane electrochemical gradient

membrane

integral to membrane

nuclear fragmentation during apoptosis

release of matrix enzymes from mitochondria

protein homodimerization activity

protein homodimerization activity

regulation of apoptosis

regulation of protein homodimerization activity

regulation of protein heterodimerization activity

positive regulation of neuron apoptosis

mitochondrial fragmentation during apoptosis

induction of retinal programmed cell death

protein heterodimerization activity

protein homooligomerization

BH3 domain binding

regulation of mitochondrial membrane potential

p53 signaling pathway

Apoptosis

Neurotrophin signaling pathway

Amyotrophic lateral sclerosis (ALS)

Huntington's disease

Prion diseases

Pathways in cancer

Colorectal cancer

212423_at -0.526 8.252 -3.210 5.752e-03 0.132 -2.214 ZCCHC24 zinc finger, CCHC domain containing 24 10 -80812090 AK024784 10q22.3 Hs.523080 5

nucleic acid binding

zinc ion binding

metal ion binding

 
230276_at -0.390 4.747 -3.210 5.753e-03 0.132 -2.214 FAM49A family with sequence similarity 49, member A 2 -16597381 AI934342 2p24.2 Hs.467769 8

intracellular

 
203244_at -0.354 8.432 -3.210 5.757e-03 0.132 -2.215 PEX5 peroxisomal biogenesis factor 5 12 7233025, 7233548, 7234224 NM_000319 12p13.31 Hs.567327 45

protein binding

cytoplasm

peroxisome

protein transport

membrane

 
213002_at 0.544 5.961 3.210 5.758e-03 0.132 -2.215 MARCKS myristoylated alanine-rich protein kinase C substrate 6 114285219 AA770596 6q22.2 Hs.519909 Hs.712721 41

protein kinase C binding

calmodulin binding

cytoplasm

centrosome

cell cortex

actin cytoskeleton

membrane

germinal vesicle

actin filament binding

Fc gamma R-mediated phagocytosis

219081_at -0.773 6.824 -3.210 5.761e-03 0.132 -2.215 ANKHD1 ankyrin repeat and KH domain containing 1 5 139761612, 139761612 NM_024668 5q31.3 Hs.594084 12

RNA binding

protein binding

cytoplasm

 
224877_s_at 0.371 7.952 3.209 5.767e-03 0.132 -2.216 MRPS5 mitochondrial ribosomal protein S5 2 -95116678 BE970056 2p11.2-q11.2 Hs.655259 9

RNA binding

structural constituent of ribosome

protein binding

intracellular

mitochondrion

ribosome

translation

 
213864_s_at -0.455 9.661 -3.209 5.769e-03 0.132 -2.217 NAP1L1 nucleosome assembly protein 1-like 1 12 -74724938 AI985751 12q21.2 Hs.524599 Hs.695185 17

protein binding

nucleus

chromatin assembly complex

DNA replication

nucleosome assembly

positive regulation of cell proliferation

melanosome

 
228785_at -0.412 7.557 -3.209 5.770e-03 0.132 -2.217 ZNF281 zinc finger protein 281 1 -198642042 AA121673 1q32.1 Hs.59757 5

negative regulation of transcription from RNA polymerase II promoter

DNA binding

specific RNA polymerase II transcription factor activity

intracellular

nucleus

DNA-directed RNA polymerase II, core complex

zinc ion binding

regulation of transcription

metal ion binding

 
229422_at -0.631 6.298 -3.209 5.771e-03 0.132 -2.217 NRD1 nardilysin (N-arginine dibasic convertase) 1 -52027453 AA448346 1p32.2-p32.1 Hs.584782 18

metalloendopeptidase activity

protein binding

cytosol

proteolysis

neuromuscular junction development

peptidase activity

zinc ion binding

cell proliferation

cell surface

cell migration

metal ion binding

epidermal growth factor binding

positive regulation of membrane protein ectodomain proteolysis

regulation of endopeptidase activity

 
202863_at 0.487 6.380 3.209 5.773e-03 0.132 -2.217 SP100 SP100 nuclear antigen 2 230989114, 230989114 NM_003113 2q37.1 Hs.369056 34

negative regulation of transcription from RNA polymerase II promoter

DNA binding

transcription coactivator activity

transcription corepressor activity

nucleus

chromosome

DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator

PML body

kinase binding

protein domain specific binding

response to type I interferon

response to type I interferon

response to interferon-gamma

response to interferon-gamma

protein homodimerization activity

negative regulation of transcription factor activity

interspecies interaction between organisms

positive regulation of transcription, DNA-dependent

negative regulation of cell motion

interferon-gamma-mediated signaling pathway

type I interferon-mediated signaling pathway

 
231927_at -0.518 5.488 -3.208 5.779e-03 0.132 -2.218 ATF6 activating transcription factor 6 1 160002707 BF671883 1q22-q23 Hs.492740 43

transcription factor activity

RNA polymerase II transcription factor activity

transcription coactivator activity

nucleus

nuclear envelope

nucleoplasm

endoplasmic reticulum

endoplasmic reticulum membrane

regulation of transcription from RNA polymerase II promoter

protein folding

response to unfolded protein

positive regulation of gene-specific transcription involved in unfolded protein response

signal transduction

membrane

integral to membrane

sequence-specific DNA binding

protein dimerization activity

Alzheimer's disease

211938_at -0.292 10.524 -3.208 5.780e-03 0.132 -2.218 EIF4B eukaryotic translation initiation factor 4B 12 51686328 BF247371 12q13.13 Hs.648394 Hs.702041 23

nucleotide binding

RNA binding

translation initiation factor activity

cytosol

translation

regulation of translational initiation

eukaryotic translation initiation factor 4F complex

mTOR signaling pathway

1554127_s_at -0.657 8.134 -3.208 5.782e-03 0.132 -2.219 MSRB3 methionine sulfoxide reductase B3 12 63958754 BC040053 12q14.3 Hs.339024 6

mitochondrion

endoplasmic reticulum

peptide-methionine-(S)-S-oxide reductase activity

zinc ion binding

oxidoreductase activity

metal ion binding

oxidation reduction

 
204447_at 0.328 6.198 3.207 5.790e-03 0.132 -2.220 ProSAPiP1 ProSAPiP1 protein 20 -3091272 NM_014731 20p13 Hs.90232 4

structural molecule activity

cytoplasm

membrane

 
1560562_a_at 0.533 4.040 3.207 5.793e-03 0.132 -2.221 ZNF677 zinc finger protein 677 19 -58430449 AK026366 19q13.42 Hs.20506 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
218761_at -0.419 7.007 -3.206 5.800e-03 0.132 -2.222 RNF111 ring finger protein 111 15 57067156 NM_017610 15q21 Hs.404423 13

protein binding

nucleus

cytoplasm

multicellular organismal development

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
215691_x_at 0.452 7.146 3.206 5.802e-03 0.132 -2.222 HSPB11 heat shock protein family B (small), member 11 1 -54159821 AV702994 1p32.1-p33 Hs.525462 Hs.624686 9

response to stress

cell adhesion

 
205984_at 0.457 3.481 3.206 5.807e-03 0.132 -2.223 CRHBP corticotropin releasing hormone binding protein 5 76284435 NM_001882 5q11.2-q13.3 Hs.115617 31

protein binding

extracellular space

soluble fraction

signal transduction

female pregnancy

learning or memory

adrenocorticotropin-releasing hormone binding

hormone metabolic process

 
202464_s_at -1.838 8.632 -3.204 5.824e-03 0.132 -2.225 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 10 6226848, 6284845 NM_004566 10p14-p15 Hs.719094 28

nucleotide binding

6-phosphofructo-2-kinase activity

6-phosphofructo-2-kinase activity

fructose-2,6-bisphosphate 2-phosphatase activity

ATP binding

cellular_component

cytosol

fructose 2,6-bisphosphate metabolic process

metabolic process

kinase activity

transferase activity

hydrolase activity

identical protein binding

Fructose and mannose metabolism

236728_at 0.785 4.987 3.204 5.824e-03 0.132 -2.225 LNPEP leucyl/cystinyl aminopeptidase 5 96297101, 96319911 AW070437 5q15 Hs.527199 Hs.656905 44

aminopeptidase activity

extracellular region

intracellular

plasma membrane

integral to plasma membrane

proteolysis

cell-cell signaling

female pregnancy

peptidase activity

metallopeptidase activity

zinc ion binding

metal ion binding

Renin-angiotensin system

215368_at -0.569 8.289 -3.204 5.829e-03 0.132 -2.226 NEB nebulin 2 -152050098 R78299 2q22 Hs.588655 32

actin binding

protein binding

cytoplasm

somatic muscle development

structural constituent of muscle

actin cytoskeleton

sarcomere

Z disc

regulation of actin filament length

 
1557132_at 0.230 2.251 3.203 5.841e-03 0.132 -2.228 WDR17 WD repeat domain 17 4 177224125 BI713506 4q34 Hs.532056 3    
226519_s_at 0.496 6.955 3.202 5.848e-03 0.133 -2.229 AGXT2L2 alanine-glyoxylate aminotransferase 2-like 2 5 -177568146 AL561859 5q35.3 Hs.248746 4

mitochondrion

transaminase activity

transferase activity

pyridoxal phosphate binding

 
229855_at -0.831 5.085 -3.202 5.855e-03 0.133 -2.230 RNF34 ring finger protein 34 12 120322284 AA779208 12q24.31 Hs.292804 11

protein binding

nucleus

apoptosis

zinc ion binding

membrane

nuclear speck

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
212718_at -0.347 8.732 -3.202 5.858e-03 0.133 -2.231 PAPOLA poly(A) polymerase alpha 14 96038472 BF797555 14q32.31 Hs.719187 17

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

polynucleotide adenylyltransferase activity

ATP binding

nucleus

nucleolus

cytoplasm

transcription

mRNA polyadenylation

transferase activity

nucleotidyltransferase activity

RNA degradation

219244_s_at 0.563 8.261 3.199 5.888e-03 0.133 -2.236 MRPL46 mitochondrial ribosomal protein L46 15 -86803712 NM_022163 15q24-q25 Hs.534261 6

molecular_function

cellular_component

mitochondrion

ribosome

biological_process

 
1554966_a_at -0.633 7.394 -3.199 5.892e-03 0.133 -2.236 FILIP1L filamin A interacting protein 1-like 3 -101049461, -101049461, -101034677 AF329092 3q12.1 Hs.104672 8

molecular_function

nucleus

cytoplasm

biological_process

membrane

myosin complex

 
204263_s_at 0.504 6.825 3.198 5.902e-03 0.133 -2.238 CPT2 carnitine palmitoyltransferase 2 1 53434688 M58581 1p32 Hs.713535 53

carnitine O-palmitoyltransferase activity

carnitine O-palmitoyltransferase activity

mitochondrion

mitochondrial inner membrane

mitochondrial inner membrane

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

transport

carnitine shuttle

acyltransferase activity

membrane

transferase activity

regulation of fatty acid oxidation

Fatty acid metabolism

PPAR signaling pathway

224952_at 0.354 4.534 3.198 5.904e-03 0.133 -2.238 TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 17 58440629 BF115054 17q23.2-q23.3 Hs.410889 3

binding

 
211110_s_at -0.544 6.035 -3.198 5.904e-03 0.133 -2.238 AR androgen receptor X 66680598, 66705407 AF162704 Xq11.2-q12 Hs.496240 1010

in utero embryonic development

transcription factor activity

receptor activity

androgen receptor activity

androgen receptor activity

receptor binding

androgen binding

nucleus

cytoplasm

transport

signal transduction

cell-cell signaling

sex differentiation

cell death

zinc ion binding

cell proliferation

male gonad development

cell growth

male somatic sex determination

androgen receptor signaling pathway

prostate gland development

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

protein dimerization activity

regulation of catalytic activity

Pathways in cancer

Prostate cancer

219421_at -0.511 7.286 -3.198 5.907e-03 0.133 -2.238 TTC33 tetratricopeptide repeat domain 33 5 -40747434 NM_012382 5p15.2-p12 Hs.348915 Hs.621357 3

binding

 
200979_at 0.975 7.231 3.197 5.914e-03 0.133 -2.240 PDHA1 pyruvate dehydrogenase (lipoamide) alpha 1 X 19271931 BF739979 Xp22.2-p22.1 Hs.530331 54

pyruvate dehydrogenase (acetyl-transferring) activity

protein binding

mitochondrion

mitochondrial matrix

glycolysis

oxidoreductase activity

oxidation reduction

Glycolysis / Gluconeogenesis

Citrate cycle (TCA cycle)

Valine, leucine and isoleucine biosynthesis

Pyruvate metabolism

Butanoate metabolism

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

226595_at 0.272 6.249 3.195 5.935e-03 0.134 -2.243 SNX21 sorting nexin family member 21 20 43895876 AI935964 20q13.12 Hs.472854 8

protein binding

cell communication

protein transport

phosphoinositide binding

 
235030_at -0.467 6.982 -3.195 5.936e-03 0.134 -2.243 FAM55C family with sequence similarity 55, member C 3 102980718, 102980975 BF969254 3q12.3 Hs.595933 4

extracellular region

 
223804_s_at 0.431 7.609 3.195 5.938e-03 0.134 -2.243 THUMPD3 THUMP domain containing 3 3 9379716 BC001622 3p25.3 Hs.443081 5

RNA binding

protein binding

methyltransferase activity

transferase activity

 
225521_at -0.501 5.871 -3.195 5.940e-03 0.134 -2.244 ANAPC7 anaphase promoting complex subunit 7 12 -109297656, -109295087 AL137586 12q24.11 Hs.524741 30

binding

nucleoplasm

cytosol

cell cycle

mitosis

modification-dependent protein catabolic process

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

cell division

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

224607_s_at -0.301 8.276 -3.194 5.945e-03 0.134 -2.245 SRP68 signal recognition particle 68kDa 17 -71546785 BG398597 17q25.1 Hs.514495 11

RNA binding

signal recognition particle binding

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

signal recognition particle, endoplasmic reticulum targeting

ribosome

response to drug

Protein export

227877_at 0.381 5.797 3.194 5.952e-03 0.134 -2.246 C5orf39 chromosome 5 open reading frame 39 5 -43074939 AI991103 5p12 Hs.529385 5

receptor activity

 
1557067_s_at -0.429 6.063 -3.193 5.956e-03 0.134 -2.246 LUC7L LUC7-like (S. cerevisiae) 16 -178974, -178970 AI744735 16p13.3 Hs.16803 11

protein binding

nucleus

zinc ion binding

negative regulation of striated muscle development

metal ion binding

RS domain binding

 
224871_at -0.369 7.753 -3.193 5.956e-03 0.134 -2.246 TPRG1L tumor protein p63 regulated 1-like 1 3531415 AK025464 1p36.32 Hs.20529 5

synaptic vesicle

cell junction

cytoplasmic vesicle

synapse

 
203932_at 0.430 6.464 3.192 5.970e-03 0.134 -2.248 HLA-DMB major histocompatibility complex, class II, DM beta 6 -33010392, -4283265, -4088488 NM_002118 6p21.3 Hs.654428 76

antigen processing and presentation of peptide or polysaccharide antigen via MHC class II

lysosome

endosome

plasma membrane

immune response

integral to membrane

MHC class II protein complex

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

203185_at 0.477 4.349 3.192 5.970e-03 0.134 -2.248 RASSF2 Ras association (RalGDS/AF-6) domain family member 2 20 -4708669, -4708668 NM_014737 20pter-p12.1 Hs.631504 20

protein binding

nucleus

cell cycle

signal transduction

 
205163_at -0.737 13.398 -3.191 5.981e-03 0.134 -2.250 MYLPF myosin light chain, phosphorylatable, fast skeletal muscle 16 30293623 NM_013292 16p11.2 Hs.50889 5

motor activity

calcium ion binding

muscle myosin complex

skeletal muscle tissue development

structural constituent of muscle

myosin complex

Focal adhesion

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

207871_s_at -0.706 5.548 -3.191 5.983e-03 0.134 -2.250 ST7 suppression of tumorigenicity 7 7 116380616, 116380616 NM_018412 7q31.1-q31.3 Hs.368131 21

membrane

integral to membrane

 
214579_at 0.339 4.474 3.190 5.993e-03 0.134 -2.252 NIPAL3 NIPA-like domain containing 3 1 24614831 NM_020448 1p36.12-p35.1 Hs.523442 6

membrane

integral to membrane

 
226902_at -0.438 10.746 -3.190 6.001e-03 0.134 -2.253 USP13 ubiquitin specific peptidase 13 (isopeptidase T-3) 3 180853626 BF109140 3q26.2-q26.3 Hs.175322 11

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

ubiquitin-dependent protein catabolic process

peptidase activity

zinc ion binding

metal ion binding

 
205843_x_at 0.360 8.314 3.189 6.010e-03 0.134 -2.254 CRAT carnitine acetyltransferase 9 -130896895, -130896893 NM_000755 9q34.1 Hs.12068 10

carnitine O-acetyltransferase activity

mitochondrion

mitochondrial inner membrane

peroxisome

endoplasmic reticulum

lipid metabolic process

fatty acid metabolic process

transport

acyltransferase activity

energy derivation by oxidation of organic compounds

membrane

transferase activity

 
204651_at -0.374 6.531 -3.189 6.010e-03 0.134 -2.255 NRF1 nuclear respiratory factor 1 7 129038790, 129057154 AW003022 7q32 Hs.654363 47

DNA binding

nucleus

generation of precursor metabolites and energy

regulation of transcription from RNA polymerase II promoter

regulation of transcription

Huntington's disease

205552_s_at 0.462 4.267 3.189 6.012e-03 0.134 -2.255 OAS1 2',5'-oligoadenylate synthetase 1, 40/46kDa 12 111829121, 111829121 NM_002534 12q24.1 Hs.524760 44

nucleotide binding

RNA binding

ATP binding

nucleus

cytoplasm

mitochondrion

endoplasmic reticulum

microsome

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

immune response

transferase activity

nucleotidyltransferase activity

 
214909_s_at 0.350 6.284 3.189 6.015e-03 0.134 -2.255 DDAH2 dimethylarginine dimethylaminohydrolase 2 6 -31802795, -3140940, -2942393 AK026191 6p21.3 Hs.247362 22

protein binding

cytoplasm

cytosol

arginine catabolic process

nitric oxide biosynthetic process

anti-apoptosis

defense response

response to unfolded protein

nitric oxide mediated signal transduction

response to nutrient

dimethylargininase activity

hydrolase activity

protein complex

NF-kappaB binding

 
203371_s_at 0.224 11.399 3.189 6.017e-03 0.134 -2.255 NDUFB3 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa 2 201644706 NM_002491 2q31.3 Hs.109760 8

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

transport

NADH dehydrogenase (ubiquinone) activity

membrane

integral to membrane

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

201641_at 0.432 6.649 3.188 6.027e-03 0.135 -2.257 BST2 bone marrow stromal cell antigen 2 19 -17374754 NM_004335 19p13.2 Hs.118110 20

signal transducer activity

Golgi apparatus

plasma membrane

integral to plasma membrane

humoral immune response

cell-cell signaling

multicellular organismal development

cell proliferation

response to virus

anchored to membrane

B cell activation

positive regulation of I-kappaB kinase/NF-kappaB cascade

 
219963_at -0.401 10.097 -3.187 6.036e-03 0.135 -2.258 DUSP13 dual specificity phosphatase 13 10 -76524197, -76524195 NM_016364 10q22.2 Hs.178170 9

protein tyrosine phosphatase activity

protein amino acid dephosphorylation

meiosis

spermatogenesis

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

 
235033_at -0.416 5.786 -3.185 6.058e-03 0.135 -2.262 NPEPL1 aminopeptidase-like 1 20 56701267 AL577823 20q13.32 Hs.554211 Hs.654868 7

aminopeptidase activity

intracellular

proteolysis

peptidase activity

zinc ion binding

manganese ion binding

metal ion binding

 
212308_at -0.737 6.284 -3.184 6.073e-03 0.135 -2.264 CLASP2 cytoplasmic linker associated protein 2 3 -33512741 AL137636 3p22.3 Hs.108614 17

condensed chromosome kinetochore

protein binding

cytoplasm

Golgi apparatus

centrosome

spindle

kinetochore microtubule

cytoskeleton

cytoplasmic microtubule

cell cortex

negative regulation of microtubule depolymerization

cell cycle

mitosis

establishment or maintenance of cell polarity

galactoside 2-alpha-L-fucosyltransferase activity

regulation of microtubule polymerization or depolymerization

microtubule plus-end binding

cell division

 
218772_x_at -0.802 8.424 -3.183 6.083e-03 0.136 -2.266 TMEM38B transmembrane protein 38B 9 107496645 NM_018112 9q31.2 Hs.411925 5

potassium channel activity

endoplasmic reticulum

ion transport

potassium ion transport

membrane

integral to membrane

potassium ion binding

nuclear membrane

sarcoplasmic reticulum membrane

 
203544_s_at -0.408 7.175 -3.183 6.086e-03 0.136 -2.266 STAM signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 10 17726129 NM_003473 10p14-p13 Hs.441498 30

SH3/SH2 adaptor activity

protein binding

cytoplasm

endosome

cytosol

intracellular protein transport

signal transduction

membrane

Endocytosis

Jak-STAT signaling pathway

203299_s_at -0.428 8.217 -3.182 6.093e-03 0.136 -2.267 AP1S2 adaptor-related protein complex 1, sigma 2 subunit X -15753849 AF251295 Xp22.2 Hs.653504 Hs.656471 21

protein binding

Golgi apparatus

cytosol

coated pit

intracellular protein transport

endocytosis

protein transporter activity

membrane

clathrin coat of trans-Golgi network vesicle

clathrin adaptor complex

cytoplasmic vesicle

Lysosome

206015_s_at -0.413 8.121 -3.182 6.102e-03 0.136 -2.269 FOXJ3 forkhead box J3 1 -42414796 NM_014947 1pter-q31.3 Hs.26023 4

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

sequence-specific DNA binding

 
217226_s_at 0.364 5.217 3.181 6.113e-03 0.136 -2.270 SFXN3 sideroflexin 3 10 102780985 M95929 10q24.31 Hs.283844 3

iron ion binding

mitochondrion

cation transport

iron ion transport

cation transmembrane transporter activity

membrane

integral to membrane

 
228702_at -0.807 7.814 -3.181 6.117e-03 0.136 -2.271 FLJ43663 hypothetical LOC378805 7 -130279458, -130279458 AL569506 7q32.3 Hs.150556 Hs.649308 2    
202198_s_at 0.389 4.696 3.179 6.133e-03 0.136 -2.273 MTMR3 myotubularin related protein 3 22 28609157 AF233438 22q12.2 Hs.474536 16

protein serine/threonine phosphatase activity

protein tyrosine phosphatase activity

membrane fraction

cytoplasm

protein amino acid dephosphorylation

zinc ion binding

membrane

hydrolase activity

metal ion binding

 
201764_at 0.391 7.300 3.179 6.137e-03 0.136 -2.274 TMEM106C transmembrane protein 106C 12 46643596 NM_024056 12q13.1 Hs.596726 5

molecular_function

cellular_component

endoplasmic reticulum

biological_process

membrane

integral to membrane

 
204000_at 0.327 5.556 3.179 6.139e-03 0.136 -2.274 GNB5 guanine nucleotide binding protein (G protein), beta 5 15 -50200414, -50200414 NM_016194 15q21.2 Hs.155090 26

GTPase activity

signal transducer activity

protein binding

nucleus

heterotrimeric G-protein complex

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

Chemokine signaling pathway

228882_at 0.463 5.286 3.178 6.151e-03 0.136 -2.276 TUB tubby homolog (mouse) 11 8016755, 8059484 AL042088 11p15.5 Hs.231850 Hs.568986 16

nucleus

cytoplasm

response to stimulus

 
208822_s_at 0.327 8.909 3.178 6.154e-03 0.136 -2.276 DAP3 death associated protein 3 1 153925497, 153925497 U18321 1q21-q22 Hs.516746 26

protein binding

mitochondrion

mitochondrial ribosome

ribosome

induction of apoptosis by extracellular signals

apoptotic mitochondrial changes

small ribosomal subunit

 
236473_at 0.278 3.843 3.178 6.154e-03 0.136 -2.276 CC2D2A coiled-coil and C2 domain containing 2A 4 15080586, 15080586, 15089933 AI765222 4p15.32 Hs.590928 8

cytoplasm

cilium

microtubule basal body

cell projection organization

 
227887_at 0.415 5.556 3.178 6.155e-03 0.136 -2.276 LOC400236 hypothetical LOC400236 14   AW138940 14q32.11 Hs.585207 1    
222660_s_at -0.252 3.727 -3.177 6.157e-03 0.136 -2.277 RNF38 ring finger protein 38 9 -36326398, -36326398, -36326398 AL136817 9p13 Hs.333503 12

protein binding

zinc ion binding

metal ion binding

 
238647_at -0.531 5.084 -3.177 6.162e-03 0.136 -2.277 C14orf28 chromosome 14 open reading frame 28 14 44436256 AA496213 14q21.2 Hs.82098 3    
244727_at 0.314 3.427 3.177 6.163e-03 0.136 -2.278 KCNQ1OT1 KCNQ1 overlapping transcript 1 (non-protein coding) 11 -2618343 BF592986 11p15 Hs.647285 Hs.655148 25    
1555044_a_at -0.701 8.384 -3.177 6.165e-03 0.136 -2.278 KBTBD5 kelch repeat and BTB (POZ) domain containing 5 3 42702014 AY176040 3p22.1 Hs.350288 3

protein binding

 
242477_at 0.281 3.398 3.177 6.167e-03 0.136 -2.278 TTC39B tetratricopeptide repeat domain 39B 9 -15161560 BF056282 9p22.3 Hs.563630 3

binding

 
243188_at 0.293 3.340 3.176 6.171e-03 0.136 -2.279 ZNF283 zinc finger protein 283 19 49023312 AI753038 19q13.31 Hs.652513 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
218683_at -0.563 7.184 -3.176 6.175e-03 0.136 -2.279 PTBP2 polypyrimidine tract binding protein 2 1 96959762 NM_021190 1p22.1-p21.3 Hs.596061 Hs.718552 25

nucleotide binding

RNA binding

nucleus

mRNA processing

RNA splicing

 
213082_s_at 0.397 4.502 3.176 6.177e-03 0.136 -2.280 SLC35D2 solute carrier family 35, member D2 9 -98122809 AJ005866 9q22.32 Hs.494556 6

nucleotide-sugar transmembrane transporter activity

cellular_component

Golgi apparatus

biological_process

carbohydrate transport

membrane

integral to membrane

 
211801_x_at -0.534 4.834 -3.176 6.179e-03 0.136 -2.280 MFN1 mitofusin 1 3 180548173 AF329637 3q26.33 Hs.478383 16

nucleotide binding

GTPase activity

GTP binding

cytoplasm

mitochondrion

mitochondrial outer membrane

mitochondrial fusion

biological_process

membrane

integral to membrane

hydrolase activity

 
209540_at 0.553 6.134 3.175 6.188e-03 0.136 -2.281 IGF1 insulin-like growth factor 1 (somatomedin C) 12 -101335583, -101313774, -101313774 AU144912 12q22-q23 Hs.160562 714

skeletal system development

osteoblast differentiation

insulin receptor binding

insulin-like growth factor receptor binding

insulin-like growth factor receptor binding

hormone activity

hormone activity

protein binding

extracellular region

extracellular region

extracellular region

DNA replication

anti-apoptosis

cell motion

signal transduction

Ras protein signal transduction

nervous system development

muscle organ development

growth factor activity

positive regulation of cell proliferation

glycolate metabolic process

organ morphogenesis

glial cell differentiation

positive regulation of phosphoinositide 3-kinase cascade

satellite cell maintenance involved in skeletal muscle regeneration

muscle hypertrophy

myotube cell development

positive regulation of smooth muscle cell migration

insulin-like growth factor binding protein complex

positive regulation of granule cell precursor proliferation

water homeostasis

proteoglycan biosynthetic process

mammary gland development

platelet alpha granule lumen

regulation of steroid hormone receptor signaling pathway

negative regulation of smooth muscle cell apoptosis

regulation of multicellular organism growth

positive regulation of tyrosine phosphorylation of Stat5 protein

positive regulation of gene-specific transcription

positive regulation of insulin-like growth factor receptor signaling pathway

myoblast differentiation

positive regulation of DNA replication

positive regulation of DNA replication

positive regulation of glycolysis

positive regulation of mitosis

positive regulation of transcription from RNA polymerase II promoter

positive regulation of Ras protein signal transduction

phosphoinositide-mediated signaling

positive regulation of fibroblast proliferation

positive regulation of smooth muscle cell proliferation

branching morphogenesis of a tube

chondroitin sulfate proteoglycan biosynthetic process

positive regulation of epithelial cell proliferation

positive regulation of peptidyl-tyrosine phosphorylation

regulation of protein metabolic process

myoblast proliferation

p53 signaling pathway

mTOR signaling pathway

Focal adhesion

Long-term depression

Pathways in cancer

Glioma

Prostate cancer

Melanoma

Hypertrophic cardiomyopathy (HCM)

1553551_s_at 0.238 13.655 3.175 6.189e-03 0.136 -2.282 ND2 MTND2 MT   NM_173709     43

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

oxygen and reactive oxygen species metabolic process

transport

NADH dehydrogenase (ubiquinone) activity

membrane

integral to membrane

oxidoreductase activity

electron transport chain

ATP synthesis coupled electron transport

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Parkinson's disease

222851_at -0.457 4.566 -3.173 6.207e-03 0.137 -2.284 ZNF654 zinc finger protein 654 3 88270951 AL120354 3p11.1 Hs.591650 Hs.661116 1

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
202065_s_at -0.233 5.816 -3.173 6.210e-03 0.137 -2.285 PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 11 69794470, 69794470 BG033593 11q13.3 Hs.530749 17

signal transducer activity

protein binding

cytoplasm

cell-matrix adhesion

signal transduction

 
1555462_at 0.749 5.199 3.172 6.221e-03 0.137 -2.286 PPP1R1C protein phosphatase 1, regulatory (inhibitor) subunit 1C 2 182558795 AF494535 2q31.3 Hs.10941 3

phosphoprotein phosphatase inhibitor activity

cytoplasm

signal transduction

 
213355_at -1.206 6.136 -3.172 6.222e-03 0.137 -2.286 ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 3 99934261 AI989567 3q12.1 Hs.148716 5

Golgi apparatus

amino sugar metabolic process

protein amino acid glycosylation

glycolipid metabolic process

sialyltransferase activity

protein lipoylation

membrane

integral to membrane

integral to Golgi membrane

Glycosphingolipid biosynthesis - lacto and neolacto series

Metabolic pathways

221563_at -0.804 7.047 -3.172 6.226e-03 0.137 -2.287 DUSP10 dual specificity phosphatase 10 1 -219941388, -219941388 N36770 1q41 Hs.497822 15

protein tyrosine phosphatase activity

nucleus

cytoplasm

protein amino acid dephosphorylation

response to stress

JNK cascade

hydrolase activity

MAP kinase tyrosine/serine/threonine phosphatase activity

MAPK signaling pathway

217952_x_at -0.519 7.112 -3.172 6.227e-03 0.137 -2.287 PHF3 PHD finger protein 3 6 64414389 BF430956 6q12 Hs.348921 13

molecular_function

protein binding

cellular_component

nucleus

transcription

multicellular organismal development

zinc ion binding

metal ion binding

 
201005_at 0.746 8.565 3.172 6.227e-03 0.137 -2.287 CD9 CD9 molecule 12 6179815 NM_001769 12p13.3 Hs.114286 96

protein binding

plasma membrane

plasma membrane

integral to plasma membrane

cell motion

cell adhesion

fusion of sperm to egg plasma membrane

platelet activation

paranodal junction assembly

platelet alpha granule membrane

Hematopoietic cell lineage

210946_at -0.372 8.838 -3.172 6.228e-03 0.137 -2.287 PPAP2A phosphatidic acid phosphatase type 2A 5 -54756439 AF014403 5q11 Hs.696231 20

membrane fraction

cytosol

plasma membrane

integral to plasma membrane

activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway

phosphatidate phosphatase activity

phosphatidate phosphatase activity

phosphatidate phosphatase activity

negative regulation of cell proliferation

germ cell migration

hydrolase activity

regulation of lipid metabolic process

androgen receptor signaling pathway

phospholipid dephosphorylation

Glycerolipid metabolism

Glycerophospholipid metabolism

Ether lipid metabolism

Sphingolipid metabolism

Metabolic pathways

Fc gamma R-mediated phagocytosis

206122_at 0.324 6.436 3.171 6.234e-03 0.137 -2.288 SOX15 SRY (sex determining region Y)-box 15 17 -7432221 NM_006942 17p13 Hs.95582 13

negative regulation of transcription from RNA polymerase II promoter

chromatin binding

transcription factor activity

RNA polymerase II transcription factor activity

protein binding

nucleus

cytoplasm

chromatin organization

male gonad development

cell differentiation

skeletal muscle regeneration

negative regulation of striated muscle development

positive regulation of transcription from RNA polymerase II promoter

myoblast development

 
219283_at -0.411 6.715 -3.171 6.234e-03 0.137 -2.288 C1GALT1C1 C1GALT1-specific chaperone 1 X -119643561 NM_014158 Xq24 Hs.643920 13

membrane

integral to membrane

O-Glycan biosynthesis

Metabolic pathways

228593_at 0.258 6.091 3.171 6.237e-03 0.137 -2.289 MTMR9L myotubularin related protein 9-like 1 -32469848 AI271425 1p35.1 Hs.471067 3    
223021_x_at -0.578 7.356 -3.170 6.245e-03 0.137 -2.290 VTA1 Vps20-associated 1 homolog (S. cerevisiae) 6 142510102 BF241590 6q24.1 Hs.431367 12

cytoplasm

endosome

protein transport

membrane

Endocytosis

205034_at -0.457 3.451 -3.170 6.246e-03 0.137 -2.290 CCNE2 cyclin E2 8 -95961628 NM_004702 8q22.1 Hs.567387 15

cell cycle checkpoint

regulation of cyclin-dependent protein kinase activity

protein binding

nucleus

nucleoplasm

cytosol

cell cycle

cell division

Cell cycle

p53 signaling pathway

Pathways in cancer

Prostate cancer

Small cell lung cancer

209362_at -0.506 7.983 -3.170 6.249e-03 0.137 -2.290 MED21 mediator complex subunit 21 12 27066749 AI688580 12p11.23 Hs.286145 27

blastocyst development

RNA polymerase II transcription factor activity

transcription coactivator activity

DNA-directed RNA polymerase activity

protein binding

nucleus

DNA-directed RNA polymerase II, core complex

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

 
223388_s_at 0.243 3.969 3.170 6.251e-03 0.137 -2.291 ZFYVE1 zinc finger, FYVE domain containing 1 14 -72505911, -72505911 AF251025 14q22-q24 Hs.335106 10

phosphatidylinositol binding

phosphatidylinositol-3,4,5-trisphosphate binding

endoplasmic reticulum

Golgi apparatus

Golgi stack

zinc ion binding

phosphatidylinositol-3,4-bisphosphate binding

metal ion binding

perinuclear region of cytoplasm

 
224416_s_at -0.397 5.640 -3.170 6.252e-03 0.137 -2.291 MED28 mediator complex subunit 28 4 17225370 AF358829 4p16 Hs.434075 Hs.644788 14

actin binding

protein binding

nucleus

cytoplasm

membrane

regulation of transcription

 
223104_at -0.252 7.874 -3.170 6.253e-03 0.137 -2.291 JAGN1 jagunal homolog 1 (Drosophila) 3 9907270 AF212230 3p25.2 Hs.24054 6

endoplasmic reticulum

membrane

integral to membrane

 
205160_at 0.416 6.679 3.170 6.255e-03 0.137 -2.291 PEX11A peroxisomal biogenesis factor 11 alpha 15 -88027290 AL360141 15q26.1 Hs.31034 9

peroxisome

peroxisomal membrane

integral to peroxisomal membrane

signal transduction

membrane

integral to membrane

peroxisome fission

 
1553070_a_at -0.564 7.099 -3.169 6.260e-03 0.137 -2.292 MYOZ3 myozenin 3 5 150020596 NM_133371 5q33.1 Hs.91626 7

protein binding

cytoplasm

Z disc

 
200593_s_at -0.267 7.885 -3.168 6.274e-03 0.137 -2.294 HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 1 -243080224 BC003621 1q44 Hs.106212 47

nucleotide binding

nuclear mRNA splicing, via spliceosome

DNA binding

RNA binding

protein binding

ATP binding

nucleus

spliceosomal complex

RNA splicing

cell surface

heterogeneous nuclear ribonucleoprotein complex

 
218794_s_at -0.318 5.401 -3.168 6.276e-03 0.137 -2.294 TXNL4B thioredoxin-like 4B 16 -70676258, -70676258, -70676258 NM_017853 16q22.2 Hs.134406 12

nucleus

spliceosomal complex

mRNA processing

cell cycle

mitosis

RNA splicing

 
202963_at -0.456 6.095 -3.166 6.298e-03 0.138 -2.298 RFX5 regulatory factor X, 5 (influences HLA class II expression) 1 -149579739 AW027312 1q21 Hs.632472 27

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

Antigen processing and presentation

Primary immunodeficiency

203143_s_at 0.242 4.637 3.166 6.302e-03 0.138 -2.298 KIAA0040 KIAA0040 1 -173392745, -173392745 T79953 1q24-q25 Hs.518138 6    
220588_at 0.291 3.931 3.165 6.315e-03 0.138 -2.300 BCAS4 breast carcinoma amplified sequence 4 20 48844873 NM_017843 20q13.13 Hs.708239 6

cytoplasm

 
212750_at 0.492 5.627 3.165 6.315e-03 0.138 -2.300 PPP1R16B protein phosphatase 1, regulatory (inhibitor) subunit 16B 20 36867761 AB020630 20q11.23 Hs.45719 7

plasma membrane

signal transduction

protein phosphatase binding

 
212180_at -0.512 8.482 -3.164 6.328e-03 0.138 -2.302 CRKL v-crk sarcoma virus CT10 oncogene homolog (avian)-like 22 19601713 AK000311 22q11 22q11.21 Hs.592205 89

blood vessel development

protein tyrosine kinase activity

SH3/SH2 adaptor activity

protein binding

intracellular signaling cascade

JNK cascade

Ras protein signal transduction

pattern specification process

heart development

organ morphogenesis

anterior/posterior pattern formation

thymus development

parathyroid gland development

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

Focal adhesion

Fc gamma R-mediated phagocytosis

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Insulin signaling pathway

Pathways in cancer

Renal cell carcinoma

Chronic myeloid leukemia

213095_x_at 0.294 6.262 3.164 6.332e-03 0.138 -2.303 AIF1 allograft inflammatory factor 1 6 31690972, 31691011, 31691767, 3029118, 3029157, 3029913, 2830581, 2830620, 2831376 AF299327 6p21.3 Hs.76364 38

calcium ion binding

nucleus

response to stress

inflammatory response

cell cycle arrest

negative regulation of cell proliferation

 
217726_at -0.352 7.621 -3.163 6.347e-03 0.138 -2.305 COPZ1 coatomer protein complex, subunit zeta 1 12 53005177 NM_016057 12q13.2-q13.3 Hs.505652 14

protein binding

cytoplasm

Golgi apparatus

cytosol

intracellular protein transport

retrograde vesicle-mediated transport, Golgi to ER

retrograde vesicle-mediated transport, Golgi to ER

intra-Golgi vesicle-mediated transport

intra-Golgi vesicle-mediated transport

membrane

membrane organization

vesicle-mediated transport

membrane coat

COPI vesicle coat

COPI vesicle coat

cytoplasmic vesicle

COPI coating of Golgi vesicle

 
202272_s_at -0.321 7.031 -3.162 6.354e-03 0.138 -2.306 FBXO28 F-box protein 28 1 222368413 NM_015176 1q42.11 Hs.64691 Hs.713992 10

modification-dependent protein catabolic process

 
228587_at 0.360 5.930 3.162 6.359e-03 0.138 -2.307 FAM83G family with sequence similarity 83, member G 17 -18815105 BE504892 17p11.2 Hs.710727 8    
241383_at 0.368 4.344 3.161 6.365e-03 0.138 -2.307 ZNF385C zinc finger protein 385C 17   H05959 17q21.2 Hs.443140 2

nucleic acid binding

intracellular

nucleus

zinc ion binding

metal ion binding

 
226086_at 0.568 4.715 3.161 6.366e-03 0.138 -2.308 SYT13 synaptotagmin XIII 11 -45218428 AB037848 11p12-p11 Hs.436643 12

integral to plasma membrane

membrane

vesicle-mediated transport

transport vesicle

 
202891_at 0.323 7.566 3.161 6.368e-03 0.138 -2.308 NIT1 nitrilase 1 1 159354514 NM_005600 1q21-q22 Hs.517342 7

nitrilase activity

nitrogen compound metabolic process

biological_process

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds

 
51192_at 0.244 6.729 3.161 6.372e-03 0.138 -2.308 SSH3 slingshot homolog 3 (Drosophila) 11 66827494 AA134926 11q13.2 Hs.29173 11

protein tyrosine phosphatase activity

nucleus

cytoplasm

cytoskeleton

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

Regulation of actin cytoskeleton

223500_at 0.677 3.602 3.161 6.374e-03 0.138 -2.309 CPLX1 complexin 1 4 -768744 BC002471 4p16.3 Hs.478930 16

cytoplasm

cytosol

neurotransmitter transport

exocytosis

synaptic transmission

syntaxin binding

 
221927_s_at 0.354 7.441 3.161 6.374e-03 0.138 -2.309 ABHD11 abhydrolase domain containing 11 7 -72789980, -72789935, -72788362, -72788362 AI923458 7q11.23 Hs.647045 9

molecular_function

cellular_component

biological_process

hydrolase activity

 
213786_at -0.541 6.373 -3.160 6.386e-03 0.138 -2.310 TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 7 27746262 AI935415 7p15 Hs.34576 21

intracellular

apoptosis

anti-apoptosis

zinc ion binding

identical protein binding

 
200719_at -0.501 8.289 -3.159 6.390e-03 0.138 -2.311 SKP1 S-phase kinase-associated protein 1 5 -133519980 BE964043 5q31 Hs.171626 Hs.710433 63

protein binding

nucleoplasm

cytosol

ubiquitin-dependent protein catabolic process

SCF ubiquitin ligase complex

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

Wnt signaling pathway

TGF-beta signaling pathway

217097_s_at -0.767 4.527 -3.159 6.391e-03 0.138 -2.311 PHTF2 putative homeodomain transcription factor 2 7 77266044, 77266044, 77307382, 77307382 AC004990 7q11.23-q21 Hs.203965 Hs.601884 11

DNA binding

nucleus

endoplasmic reticulum

regulation of transcription

 
226656_at -0.405 8.006 -3.159 6.396e-03 0.138 -2.312 CRTAP cartilage associated protein 3 33130453 AW024741 3p22.3 Hs.719160 10

extracellular region

proteinaceous extracellular matrix

 
223591_at -0.426 5.993 -3.158 6.403e-03 0.138 -2.313 RNF135 ring finger protein 135 17 26322081 BC005084 17q11.2 Hs.29874 12

protein binding

zinc ion binding

metal ion binding

 
214328_s_at -0.281 11.601 -3.158 6.404e-03 0.138 -2.313 HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 14 -101616827, -101616827 R01140 14q32.33 Hs.525600 Hs.700831 275

nucleotide binding

ATP binding

cytoplasm

cytosol

cytosol

mitochondrial transport

response to unfolded protein

signal transduction

nitric-oxide synthase regulator activity

TPR domain binding

TPR domain binding

cellular chaperone-mediated protein complex assembly

protein refolding

melanosome

protein homodimerization activity

positive regulation of nitric oxide biosynthetic process

unfolded protein binding

mitochondrial outer membrane translocase complex assembly

Antigen processing and presentation

Pathways in cancer

Prostate cancer

228308_at 0.310 5.363 3.158 6.405e-03 0.138 -2.313 FKBP11 FK506 binding protein 11, 19 kDa 12 -47603175, -47602009, -47602009 AI452444 12q13.12 Hs.655103 5

peptidyl-prolyl cis-trans isomerase activity

protein folding

membrane

integral to membrane

isomerase activity

 
207695_s_at 0.660 4.624 3.158 6.406e-03 0.138 -2.313 IGSF1 immunoglobulin superfamily, member 1 X -130245822, -130235162 NM_001555 Xq25 Hs.22111 15

receptor activity

protein binding

extracellular region

signal transduction

membrane

integral to membrane

regulation of transcription

inhibin beta-A binding

inhibin beta-B binding

 
239038_at -0.694 4.872 -3.158 6.411e-03 0.138 -2.314 C1orf52 chromosome 1 open reading frame 52 1 -85488226 AW015063 1p22.3 Hs.26226 7    
230056_at -0.393 4.275 -3.158 6.412e-03 0.138 -2.314 BPTF bromodomain PHD finger transcription factor 17 63252241 AI735696 17q24.3 Hs.444200 22

negative regulation of transcription from RNA polymerase II promoter

nucleus

cytoplasm

chromatin remodeling

brain development

DNA-dependent ATPase activity

transcription factor binding

zinc ion binding

transcription regulator activity

positive regulation of gene-specific transcription

sequence-specific DNA binding

sequence-specific DNA binding

regulation of transcription

metal ion binding

 
212386_at 0.341 9.732 3.157 6.415e-03 0.138 -2.315 TCF4 transcription factor 4 18 -51040559 BF592782 18q21.1 Hs.605153 55

transcription factor activity

protein binding

nucleus

regulation of transcription

positive regulation of transcription, DNA-dependent

protein heterodimerization activity

 
223004_s_at 0.341 10.197 3.157 6.415e-03 0.138 -2.315 C3orf1 chromosome 3 open reading frame 1 3 120700057 AF210057 3q13.33 Hs.477287 12

mitochondrion

membrane

integral to membrane

 
221221_s_at 0.385 6.145 3.157 6.420e-03 0.138 -2.315 KLHL3 kelch-like 3 (Drosophila) 5 -136981087 NM_017415 5q31 Hs.655084 8

actin binding

structural molecule activity

protein binding

cytoplasm

cytoskeleton

modification-dependent protein catabolic process

 
1555819_s_at 0.281 5.026 3.157 6.425e-03 0.138 -2.316 SAMD14 sterile alpha motif domain containing 14 17 -45545033 AY148482 17q21.33 Hs.567769 6    
224628_at -0.298 8.307 -3.156 6.428e-03 0.138 -2.316 ERLEC1 endoplasmic reticulum lectin 1 2 53867571 AF131743 2p16.2 Hs.438336 Hs.713845 10

protein binding

endoplasmic reticulum

endoplasmic reticulum lumen

 
213249_at 0.260 5.054 3.156 6.428e-03 0.138 -2.316 FBXL7 F-box and leucine-rich repeat protein 7 5 15553304 AU145127 5p15.1 Hs.433057 10

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

ubiquitin-dependent protein catabolic process

 
201817_at -0.560 8.642 -3.156 6.433e-03 0.138 -2.317 UBE3C ubiquitin protein ligase E3C 7 156624415 NM_014671 7q36.3 Hs.118351 9

protein polyubiquitination

ubiquitin-protein ligase activity

protein binding

intracellular

nucleus

cytosol

protein modification process

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

protein complex

Ubiquitin mediated proteolysis

213274_s_at -0.445 6.049 -3.156 6.435e-03 0.138 -2.317 CTSB cathepsin B 8 -11737442 AA020826 8p22 Hs.520898 140

cysteine-type endopeptidase activity

extracellular region

intracellular

soluble fraction

mitochondrion

lysosome

proteolysis

peptidase activity

response to wounding

external side of plasma membrane

apical plasma membrane

kininogen binding

peptide binding

melanosome

regulation of apoptosis

regulation of catalytic activity

Lysosome

Antigen processing and presentation

216033_s_at 0.371 4.687 3.156 6.436e-03 0.138 -2.318 FYN FYN oncogene related to SRC, FGR, YES 6 -112089177, -112089177, -112089177 S74774 6q21 Hs.390567 326

nucleotide binding

glycoprotein binding

non-membrane spanning protein tyrosine kinase activity

ATP binding

endosome

cytosol

plasma membrane

protein amino acid phosphorylation

calcium ion transport

protein kinase cascade

multicellular organismal development

learning

feeding behavior

transferase activity

manganese ion binding

identical protein binding

interspecies interaction between organisms

metal ion binding

T cell receptor signaling pathway

Axon guidance

Focal adhesion

Adherens junction

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

Fc epsilon RI signaling pathway

Prion diseases

Pathogenic Escherichia coli infection - EHEC

204140_at 0.419 5.469 3.155 6.441e-03 0.139 -2.318 TPST1 tyrosylprotein sulfotransferase 1 7 65307693 NM_003596 7q11.21 Hs.421194 17

membrane fraction

Golgi apparatus

peptidyl-tyrosine sulfation

inflammatory response

protein-tyrosine sulfotransferase activity

membrane

integral to membrane

transferase activity

 
235916_at 0.290 4.205 3.155 6.443e-03 0.139 -2.319 YPEL4 yippee-like 4 (Drosophila) 11 -57169135 BE673815 11q12.1 Hs.135978 4

nucleus

nucleolus

 
203029_s_at 0.286 4.684 3.155 6.449e-03 0.139 -2.319 PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 7 -157024510 NM_002847 7q36 Hs.490789 Hs.715864 Hs.716042 19

receptor activity

transmembrane receptor protein tyrosine phosphatase activity

protein binding

integral to plasma membrane

protein amino acid dephosphorylation

membrane

hydrolase activity

Type I diabetes mellitus

227277_at -0.471 5.409 -3.154 6.458e-03 0.139 -2.321 MTDH metadherin 8 98725582 BG530089 8q22.1 Hs.377155 23

negative regulation of transcription from RNA polymerase II promoter

protein binding

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

tight junction

membrane

integral to membrane

cell junction

nuclear membrane

perinuclear region of cytoplasm

NF-kappaB binding

positive regulation of NF-kappaB transcription factor activity

 
226132_s_at -0.351 4.695 -3.153 6.478e-03 0.139 -2.324 MANEAL mannosidase, endo-alpha-like 1 38032360, 38033746 AW272422 1p34.3 Hs.534562 Hs.713176 4

Golgi apparatus

membrane

integral to membrane

hydrolase activity

 
222090_at 0.272 5.071 3.153 6.479e-03 0.139 -2.324 LOC100134713 hypothetical protein LOC100134713 7 -140041604 BF509069 7q34 Hs.643181      
202803_s_at 0.401 5.036 3.152 6.482e-03 0.139 -2.324 ITGB2 integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) 21 -45130296, -45130296 NM_000211 21q22.3 Hs.375957 243

glycoprotein binding

receptor activity

cytoplasm

plasma membrane

plasma membrane

apoptosis

inflammatory response

cell adhesion

leukocyte adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

cell-cell signaling

integrin complex

regulation of cell shape

integral to membrane

protein kinase binding

neutrophil chemotaxis

regulation of peptidyl-tyrosine phosphorylation

Cell adhesion molecules (CAMs)

Natural killer cell mediated cytotoxicity

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

221050_s_at 0.518 7.075 3.151 6.498e-03 0.139 -2.326 GTPBP2 GTP binding protein 2 6 -43696195 NM_019096 6p21-p12 Hs.485449 7

nucleotide binding

GTPase activity

GTP binding

 
225277_at 0.249 6.283 3.151 6.504e-03 0.139 -2.327 SLC39A13 solute carrier family 39 (zinc transporter), member 13 11 47386626 AL525780 11p11.2 Hs.523664 3

ion transport

zinc ion transport

zinc ion binding

membrane

integral to membrane

metal ion transport

metal ion transmembrane transporter activity

 
208136_s_at 0.300 5.683 3.150 6.507e-03 0.139 -2.328 MGC3771 hypothetical LOC81854 16 -3100462 NM_030970 16p13.3 Hs.669490 1    
226718_at -0.407 6.567 -3.150 6.508e-03 0.139 -2.328 AMIGO1 adhesion molecule with Ig-like domain 1 1 -109850968 AA001423 1p13.3 Hs.709892 5

protein binding

cell adhesion

homophilic cell adhesion

heterophilic cell adhesion

multicellular organismal development

nervous system development

axonal fasciculation

membrane

integral to membrane

cell differentiation

axon

myelination

cell projection

positive regulation of axonogenesis

 
209348_s_at -0.674 8.347 -3.150 6.509e-03 0.139 -2.328 MAF v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) 16 -78185246 AF055376 16q22-q23 Hs.134859 37

chromatin

cytokine production

transcription factor activity

RNA polymerase II transcription factor activity

protein binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

regulation of chondrocyte differentiation

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

cell development

lens fiber cell differentiation

 
220778_x_at 0.306 5.295 3.150 6.514e-03 0.139 -2.329 SEMA6B sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B 19 -4493599 NM_020241 19p13.3 Hs.465642 4

receptor activity

multicellular organismal development

nervous system development

membrane

integral to membrane

cell differentiation

Axon guidance

208186_s_at 0.373 6.088 3.149 6.525e-03 0.139 -2.330 LIPE lipase, hormone-sensitive 19 -47597505 NM_005357 19q13.2 Hs.656980 74

triacylglycerol lipase activity

protein binding

cytoplasm

cytosol

plasma membrane

caveola

protein amino acid phosphorylation

metabolic process

steroid metabolic process

cholesterol metabolic process

lipid catabolic process

hydrolase activity

triglyceride catabolic process

hormone-sensitive lipase activity

diacylglycerol catabolic process

Insulin signaling pathway

214364_at 0.305 6.133 3.149 6.526e-03 0.139 -2.330 MTERFD2 MTERF domain containing 2 2 -241683654, -241675182 W84525 2q37.3 Hs.159556 5    
225635_s_at -0.434 4.809 -3.149 6.530e-03 0.139 -2.331 LOC401504 hypothetical gene supported by AK091718 9   BG535378 9p13.2 Hs.446271 2    
209096_at -0.380 7.394 -3.149 6.533e-03 0.139 -2.331 UBE2V2 ubiquitin-conjugating enzyme E2 variant 2 8 49083547 U62136 8q11.21 Hs.491695 23

protein polyubiquitination

DNA double-strand break processing

protein binding

nucleus

cytoplasm

regulation of DNA repair

cell proliferation

small conjugating protein ligase activity

modification-dependent protein catabolic process

UBC13-MMS2 complex

regulation of protein metabolic process

 
219015_s_at -0.443 4.438 -3.149 6.534e-03 0.139 -2.331 ALG13 asparagine-linked glycosylation 13 homolog (S. cerevisiae) X 110811068 NM_018466 Xq23 Hs.443061 14

N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity

endoplasmic reticulum

carbohydrate metabolic process

transferase activity, transferring hexosyl groups

carbohydrate binding

lipid glycosylation

N-Glycan biosynthesis

Metabolic pathways

203097_s_at -0.348 8.111 -3.148 6.544e-03 0.140 -2.333 RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 4 160408447 NM_014247 4q32.1 Hs.113912 14

MAPKKK cascade

signal transducer activity

guanyl-nucleotide exchange factor activity

calcium ion binding

protein binding

intracellular

plasma membrane

integral to plasma membrane

Rap guanyl-nucleotide exchange factor activity

cAMP-mediated signaling

diacylglycerol binding

Rap GTPase activator activity

regulation of small GTPase mediated signal transduction

MAPK signaling pathway

209392_at 0.793 6.341 3.147 6.556e-03 0.140 -2.335 ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 8 -120638500, -120638499 L35594 8q24.1 Hs.190977 47

nucleic acid binding

phosphodiesterase I activity

nucleotide diphosphatase activity

extracellular region

plasma membrane

integral to plasma membrane

phosphate metabolic process

cell motion

chemotaxis

G-protein coupled receptor protein signaling pathway

transcription factor binding

metabolic process

lipid catabolic process

hydrolase activity

metal ion binding

alkylglycerophosphoethanolamine phosphodiesterase activity

Ether lipid metabolism

214417_s_at 0.270 3.783 3.147 6.560e-03 0.140 -2.335 FETUB fetuin B 3 187840842 N39010 3q27 Hs.81073 10

molecular_function

cysteine-type endopeptidase inhibitor activity

extracellular region

biological_process

 
1565823_at -0.328 3.155 -3.146 6.571e-03 0.140 -2.337 SEPT7 septin 7 7 35807151 BF855173 7p14.3-p14.1 Hs.191346 Hs.642540 23

nucleotide binding

condensed chromosome kinetochore

cytokinesis

stress fiber

structural molecule activity

protein binding

GTP binding

nucleus

cytoplasm

spindle

cell cycle

mitosis

septin complex

protein heterooligomerization

 
208876_s_at 0.288 3.422 3.145 6.575e-03 0.140 -2.337 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 3 197951124 AI076186 3q29 Hs.518530 80

nucleotide binding

protein serine/threonine kinase activity

ATP binding

nucleus

cytoplasm

cytosol

negative regulation of protein kinase activity

apoptosis

signal transduction

membrane

transferase activity

regulation of growth

identical protein binding

interspecies interaction between organisms

protein amino acid autophosphorylation

perinuclear region of cytoplasm

MAPK signaling pathway

ErbB signaling pathway

Axon guidance

Focal adhesion

T cell receptor signaling pathway

Regulation of actin cytoskeleton

Renal cell carcinoma

219882_at -0.444 5.188 -3.145 6.576e-03 0.140 -2.337 TTLL7 tubulin tyrosine ligase-like family, member 7 1 -84107644 NM_024686 1p31.1 Hs.445826 7

tubulin-tyrosine ligase activity

cilium

microtubule basal body

protein modification process

multicellular organismal development

nervous system development

ligase activity

cell differentiation

dendrite

perikaryon

 
227187_at -0.585 7.288 -3.145 6.586e-03 0.140 -2.339 CBLL1 Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1 7 107171514 AI824009 7q22.3-q31.1 Hs.592271 9

protein binding

intracellular

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
209358_at -0.389 7.617 -3.145 6.586e-03 0.140 -2.339 TAF11 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa 6 -34953532 AF118094 6p21.31 Hs.112444 30

DNA binding

transcription coactivator activity

nucleus

nucleoplasm

transcription factor TFIID complex

transcription initiation from RNA polymerase II promoter

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

general RNA polymerase II transcription factor activity

vitamin D receptor binding

positive regulation by host of viral transcription

regulation of transcription

thyroid hormone receptor binding

protein N-terminus binding

Basal transcription factors

212997_s_at -0.386 6.715 -3.144 6.588e-03 0.140 -2.339 TLK2 tousled-like kinase 2 17 57910117 AU151689 17q23 Hs.445078 10

nucleotide binding

regulation of chromatin assembly or disassembly

protein serine/threonine kinase activity

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

nucleus

protein amino acid phosphorylation

response to DNA damage stimulus

cell cycle

intracellular signaling cascade

chromatin modification

transferase activity

 
219938_s_at -1.278 7.359 -3.144 6.592e-03 0.140 -2.340 PSTPIP2 proline-serine-threonine phosphatase interacting protein 2 18 -41817499 NM_024430 18q12 Hs.567384 9

cytoplasm

membrane

 
218891_at -0.291 7.142 -3.144 6.594e-03 0.140 -2.340 C10orf76 chromosome 10 open reading frame 76 10 -103595345 NM_024541 10q24.32 Hs.16004 4

membrane

integral to membrane

 
211026_s_at 0.501 8.747 3.143 6.605e-03 0.140 -2.341 MGLL monoglyceride lipase 3 -128890598, -128890598 BC006230 3q21.3 Hs.277035 15

lysophospholipase activity

lipid metabolic process

inflammatory response

hydrolase activity

acylglycerol lipase activity

Glycerolipid metabolism

Metabolic pathways

209035_at 0.260 6.401 3.143 6.614e-03 0.140 -2.343 MDK midkine (neurite growth-promoting factor 2) 11 46359193, 46359794, 46359878 M69148 11p11.2 Hs.82045 69

extracellular region

signal transduction

multicellular organismal development

nervous system development

growth factor activity

heparin binding

cell proliferation

response to wounding

cell differentiation

adrenal gland development

 
203636_at 0.242 4.195 3.143 6.615e-03 0.140 -2.343 MID1 midline 1 (Opitz/BBB syndrome) X -10373595, -10373595, -10373595 BE967532 Xp22 Hs.27695 38

microtubule cytoskeleton organization

protein binding

intracellular

cytoplasm

microtubule

microtubule associated complex

negative regulation of microtubule depolymerization

pattern specification process

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

Ubiquitin mediated proteolysis

208649_s_at -0.295 8.396 -3.142 6.618e-03 0.140 -2.343 VCP valosin-containing protein 9 -35046064 AF100752 9p13.3 Hs.529782 97

nucleotide binding

ATP binding

nucleus

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

microsome

cytosol

double-strand break repair

transport

activation of caspase activity

response to DNA damage stimulus

lipid binding

protein ubiquitination

hydrolase activity

ATPase activity

protein domain specific binding

modification-dependent protein catabolic process

ER-associated protein catabolic process

endoplasmic reticulum unfolded protein response

retrograde protein transport, ER to cytosol

regulation of apoptosis

establishment of protein localization

 
235809_at -0.360 3.853 -3.142 6.621e-03 0.140 -2.344 LIN54 lin-54 homolog (C. elegans) 4 -84064780, -84064780 BF678497 4q21.22 Hs.96952 2

nucleus

chromosome

regulation of transcription

 
229176_at -0.426 5.700 -3.142 6.625e-03 0.140 -2.344 ANKH ankylosis, progressive homolog (mouse) 5 -14757908 AI672354 5p15.1 Hs.156727 36

skeletal system development

inorganic phosphate transmembrane transporter activity

integral to plasma membrane

transport

phosphate transport

locomotory behavior

outer membrane

outer membrane

regulation of bone mineralization

regulation of bone mineralization

inorganic diphosphate transmembrane transporter activity

 
201278_at 0.687 6.636 3.142 6.628e-03 0.140 -2.345 DAB2 disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila) 5 -39407536 N21202 5p13 Hs.481980 47

coated pit

protein C-terminus binding

cell proliferation

membrane

clathrin coated vesicle membrane

cytoplasmic vesicle

Endocytosis

1559459_at 0.336 3.290 3.141 6.640e-03 0.140 -2.346 LOC613266 hypothetical LOC613266 20   BC043571 20p12.1 Hs.309149 1    
201791_s_at 0.274 5.806 3.140 6.644e-03 0.140 -2.347 DHCR7 7-dehydrocholesterol reductase 11 -70823104 NM_001360 11q13.2-q13.5 Hs.503134 48

blood vessel development

protein binding

nuclear outer membrane

endoplasmic reticulum

endoplasmic reticulum membrane

cholesterol biosynthetic process

post-embryonic development

membrane

integral to membrane

oxidoreductase activity

cell differentiation

lung development

multicellular organism growth

regulation of cell proliferation

7-dehydrocholesterol reductase activity

7-dehydrocholesterol reductase activity

oxidation reduction

Steroid biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

215247_at 0.263 4.405 3.140 6.645e-03 0.140 -2.347 LOC440895 LIM and senescent cell antigen-like domains 3-like 2 110062555 AI561253 2q13 Hs.372946 Hs.535619 2    
232588_at 0.339 4.360 3.140 6.652e-03 0.140 -2.348 STAG1 stromal antigen 1 3 -137538688 AI038943 3q22.3 Hs.412586 11

chromatin

protein binding

nucleus

cell cycle

chromosome segregation

mitosis

cell division

Cell cycle

213050_at -0.285 5.189 -3.140 6.652e-03 0.140 -2.348 COBL cordon-bleu homolog (mouse) 7 -51051402 AA594937 7p12.1 Hs.99141 9    
224789_at -0.424 7.100 -3.139 6.657e-03 0.141 -2.349 DCAF12 DDB1 and CUL4 associated factor 12 9 -34076380 AL555107 9p13.3 Hs.493750 Hs.716472 9

cytoplasm

centrosome

 
200653_s_at -0.382 10.801 -3.139 6.669e-03 0.141 -2.350 CALM1 calmodulin 1 (phosphorylase kinase, delta) 14 89933125 M27319 14q24-q31 Hs.282410 Hs.708270 181  

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Glioma

204362_at 0.769 6.645 3.138 6.671e-03 0.141 -2.351 SKAP2 src kinase associated phosphoprotein 2 7 -26673212 NM_003930 7p21-p15 Hs.200770 Hs.644804 19

SH3/SH2 adaptor activity

cytoplasm

plasma membrane

protein complex assembly

signal transduction

negative regulation of cell proliferation

B cell activation

 
218639_s_at 0.332 6.765 3.138 6.671e-03 0.141 -2.351 ZXDC ZXD family zinc finger C 3 -127652648, -127639133 NM_025112 3q21.3 Hs.440049 Hs.711046 8

nucleic acid binding

transcription factor activity

intracellular

nucleus

zinc ion binding

transcription activator activity

LRR domain binding

identical protein binding

positive regulation of transcription

metal ion binding

C2H2 zinc finger domain binding

 
205231_s_at -0.496 8.783 -3.137 6.684e-03 0.141 -2.352 EPM2A epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) 6 -145988132 NM_005670 6q24 Hs.486696 37

protein serine/threonine phosphatase activity

protein serine/threonine phosphatase activity

protein tyrosine phosphatase activity

protein tyrosine phosphatase activity

protein binding

nucleus

cytoplasm

endoplasmic reticulum

cytosol

polysome

plasma membrane

carbohydrate metabolic process

glycogen metabolic process

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

carbohydrate binding

 
207542_s_at 0.488 7.919 3.136 6.698e-03 0.141 -2.354 AQP1 aquaporin 1 (Colton blood group) 7 30917992 NM_000385 7p14 Hs.76152 100

transporter activity

protein binding

integral to plasma membrane

transport

water transport

excretion

water channel activity

carbon dioxide transport

ammonium transport

membrane

basolateral plasma membrane

apical plasma membrane

ammonia transporter activity

 
219660_s_at 0.424 3.738 3.136 6.706e-03 0.141 -2.355 ATP8A2 ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 13 24844208 NM_016529 13q12 Hs.444957 4

nucleotide binding

magnesium ion binding

phospholipid-translocating ATPase activity

ATP binding

ATP biosynthetic process

negative regulation of cell proliferation

ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism

phospholipid transport

membrane

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

 
213573_at -0.340 6.930 -3.136 6.708e-03 0.141 -2.356 KPNB1 karyopherin (importin) beta 1 17 43082273 AA861608 17q21.32 Hs.532793 Hs.706168 113

protein import into nucleus, docking

protein import into nucleus, translocation

nucleus

nuclear pore

nucleoplasm

cytoplasm

cytosol

NLS-bearing substrate import into nucleus

ribosomal protein import into nucleus

nuclear localization sequence binding

zinc ion binding

protein transporter activity

protein domain specific binding

interspecies interaction between organisms

 
1568618_a_at -0.591 7.864 -3.136 6.708e-03 0.141 -2.356 GALNT1 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) 18 31488530 BC038440 18q12.1 Hs.514806 26

polypeptide N-acetylgalactosaminyltransferase activity

calcium ion binding

sugar binding

extracellular region

Golgi apparatus

membrane

integral to membrane

transferase activity, transferring glycosyl groups

protein amino acid O-linked glycosylation via serine

protein amino acid O-linked glycosylation via threonine

manganese ion binding

perinuclear region of cytoplasm

O-Glycan biosynthesis

Metabolic pathways

201353_s_at 0.333 5.617 3.135 6.715e-03 0.141 -2.357 BAZ2A bromodomain adjacent to zinc finger domain, 2A 12 -55275646 AI653126 12q24.3-qter Hs.314263 11

chromatin silencing at rDNA

DNA binding

RNA binding

protein binding

nucleus

chromatin silencing complex

nucleolus

nucleolus organizer region

DNA methylation

chromatin remodeling

regulation of transcription, DNA-dependent

zinc ion binding

histone deacetylation

transcription regulator activity

rDNA heterochromatin

metal ion binding

histone acetyl-lysine binding

 
224291_at -0.234 5.535 -3.135 6.718e-03 0.141 -2.357 CACNG6 calcium channel, voltage-dependent, gamma subunit 6 19 59187353 AF288386 19q13.4 Hs.631560 5

voltage-gated ion channel activity

voltage-gated calcium channel activity

calcium ion binding

voltage-gated calcium channel complex

ion transport

calcium ion transport

membrane

integral to membrane

MAPK signaling pathway

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

226632_at 0.262 6.270 3.135 6.720e-03 0.141 -2.357 CYGB cytoglobin 17 -72035034 AL513673 17q25.3 Hs.95120 28

peroxidase activity

oxygen transporter activity

cytoplasm

transport

response to oxidative stress

oxygen transport

oxygen binding

heme binding

neuron projection

cell soma

metal ion binding

 
222701_s_at 0.367 7.226 3.134 6.738e-03 0.141 -2.360 CHCHD7 coiled-coil-helix-coiled-coil-helix domain containing 7 8 57286868 AA570393 8q12.1 Hs.436913 9    
223922_x_at 0.505 6.395 3.133 6.745e-03 0.142 -2.361 MS4A6A membrane-spanning 4-domains, subfamily A, member 6A 11 -59696546, -59695655 AB013104 11q12.1 Hs.523702 5

receptor activity

signal transduction

membrane

integral to membrane

 
1565784_at -0.386 3.653 -3.132 6.754e-03 0.142 -2.362 LOC100128262 hypothetical LOC100128262 3   AK094115 3q29 Hs.605240 Hs.679136 1    
227583_at -0.218 5.526 -3.132 6.761e-03 0.142 -2.363 POP4 processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae) 19 34789009 BE742653 19q12 Hs.412870 13

ribonuclease MRP complex

RNA binding

ribonuclease P activity

ribonuclease activity

nucleus

nucleolar ribonuclease P complex

nucleolus

rRNA processing

mRNA cleavage

tRNA processing

hydrolase activity

ribonuclease P complex

identical protein binding

 
221602_s_at 0.503 5.142 3.132 6.765e-03 0.142 -2.364 FAIM3 Fas apoptotic inhibitory molecule 3 1 -205143252, -205143252 AF057557 1q32.1 Hs.58831 Hs.719320 10

nucleus

cytoplasm

plasma membrane

focal adhesion

anti-apoptosis

immune response

cellular defense response

integral to membrane

 
1557675_at -0.350 6.739 -3.131 6.771e-03 0.142 -2.364 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 3 -12600099 BI496583 3p25 Hs.159130 273

nucleotide binding

protein serine/threonine kinase activity

receptor signaling protein activity

protein binding

ATP binding

mitochondrial outer membrane

cytosol

plasma membrane

protein amino acid phosphorylation

apoptosis

cytoskeleton organization

Ras protein signal transduction

zinc ion binding

cell proliferation

transferase activity

diacylglycerol binding

metal ion binding

nerve growth factor receptor signaling pathway

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

Vascular smooth muscle contraction

VEGF signaling pathway

Focal adhesion

Gap junction

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Long-term potentiation

Neurotrophin signaling pathway

Long-term depression

Regulation of actin cytoskeleton

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Bladder cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Non-small cell lung cancer

201381_x_at -0.251 9.087 -3.131 6.775e-03 0.142 -2.365 CACYBP calcyclin binding protein 1 173235193, 173235514 AF057356 1q24-q25 Hs.508524 15

protein binding

nucleus

cytoplasm

modification-dependent protein catabolic process

Wnt signaling pathway

234937_x_at 0.368 4.384 3.131 6.776e-03 0.142 -2.365 ZFP28 zinc finger protein 28 homolog (mouse) 19 61742128 AC007228   Hs.14794 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
225820_at -0.461 6.981 -3.130 6.787e-03 0.142 -2.367 PHF17 PHD finger protein 17 4 129950228, 129950228 AV646599 4q26-q27 Hs.12420 14

histone acetyltransferase complex

protein binding

nucleus

cytoplasm

apoptosis

response to stress

zinc ion binding

negative regulation of cell growth

histone H3 acetylation

histone H4-K5 acetylation

histone H4-K8 acetylation

histone H4-K12 acetylation

histone H4-K16 acetylation

regulation of transcription

metal ion binding

 
218659_at -0.390 6.876 -3.130 6.790e-03 0.142 -2.367 ASXL2 additional sex combs like 2 (Drosophila) 2 -25815756 NM_018263 2p24.1 Hs.594386 6

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
225267_at -0.588 9.492 -3.129 6.794e-03 0.142 -2.367 KPNA4 karyopherin alpha 4 (importin alpha 3) 3 -161700655 AI935246 3q25.33 Hs.715552 53

protein binding

nucleus

nuclear pore

cytoplasm

NLS-bearing substrate import into nucleus

intracellular protein transport

protein transporter activity

 
208209_s_at 0.302 4.459 3.129 6.796e-03 0.142 -2.368 C4BPB complement component 4 binding protein, beta 1 205328834, 205329206, 205329250 NM_000716 1q32 Hs.99886 23

extracellular region

complement activation, classical pathway

blood coagulation

innate immune response

Complement and coagulation cascades

226131_s_at -0.327 13.104 -3.129 6.797e-03 0.142 -2.368 RPS16 ribosomal protein S16 19 -44615686 AA583817 19q13.1 Hs.397609 24

RNA binding

structural constituent of ribosome

protein binding

intracellular

cytosol

ribosome

rRNA processing

translational elongation

cytosolic small ribosomal subunit

cytosolic small ribosomal subunit

ribosomal small subunit biogenesis

Ribosome

201149_s_at 0.768 8.493 3.129 6.801e-03 0.142 -2.368 TIMP3 TIMP metallopeptidase inhibitor 3 22 31526801 U67195 22q12.1-q13.2 22q12.3 Hs.644633 Hs.714168 117

enzyme inhibitor activity

protein binding

extracellular region

basement membrane

visual perception

metalloendopeptidase inhibitor activity

response to organic cyclic substance

tissue regeneration

response to estrogen stimulus

response to stimulus

negative regulation of membrane protein ectodomain proteolysis

 
220975_s_at 0.229 6.295 3.127 6.829e-03 0.142 -2.372 C1QTNF1 C1q and tumor necrosis factor related protein 1 17 74531845, 74542066 NM_030968 17q25.3 Hs.201398 11

extracellular region

 
223243_s_at -0.500 7.242 -3.127 6.835e-03 0.142 -2.373 EDEM3 ER degradation enhancer, mannosidase alpha-like 3 1 -182926247 BF439488 1q24-q25 Hs.523811 10

mannosyl-oligosaccharide 1,2-alpha-mannosidase activity

calcium ion binding

endoplasmic reticulum

endoplasmic reticulum lumen

response to unfolded protein

membrane

 
205715_at 0.396 3.667 3.126 6.840e-03 0.142 -2.374 BST1 bone marrow stromal cell antigen 1 4 15313670 NM_004334 4p15 Hs.399980 19

NAD+ nucleosidase activity

binding

plasma membrane

humoral immune response

multicellular organismal development

metabolic process

hydrolase activity

extrinsic to membrane

anchored to membrane

Nicotinate and nicotinamide metabolism

Metabolic pathways

Calcium signaling pathway

205590_at 0.347 2.619 3.126 6.845e-03 0.142 -2.374 RASGRP1 RAS guanyl releasing protein 1 (calcium and DAG-regulated) 15 -36567593 NM_005739 15q14 Hs.591127 21

guanyl-nucleotide exchange factor activity

calcium ion binding

protein binding

intracellular

membrane fraction

cytoplasm

endoplasmic reticulum

Golgi apparatus

cytosol

plasma membrane

Ras protein signal transduction

zinc ion binding

diacylglycerol binding

cell differentiation

regulation of small GTPase mediated signal transduction

MAPK signaling pathway

T cell receptor signaling pathway

230136_at 0.668 5.281 3.125 6.860e-03 0.143 -2.376 LOC400099 hypothetical LOC400099 13   AI573252 13q12.11 Hs.400432      
200785_s_at 0.300 6.244 3.125 6.860e-03 0.143 -2.376 LRP1 low density lipoprotein-related protein 1 (alpha-2-macroglobulin receptor) 12 55808548 NM_002332 12q13-q14 Hs.162757 195

receptor activity

lipid transporter activity

calcium ion binding

membrane fraction

nucleus

cytoplasm

plasma membrane

integral to plasma membrane

coated pit

lipid metabolic process

endocytosis

multicellular organismal development

lipoprotein binding

cell proliferation

apolipoprotein binding

lipoprotein receptor binding

Alzheimer's disease

226895_at -0.456 10.055 -3.124 6.866e-03 0.143 -2.377 NFIC nuclear factor I/C (CCAAT-binding transcription factor) 19 3310615, 3317572 AW134798 19p13.3 Hs.170131 23

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

intracellular

nucleus

DNA replication

regulation of transcription, DNA-dependent

positive regulation of transcription from RNA polymerase II promoter

 
222151_s_at -0.407 6.749 -3.124 6.873e-03 0.143 -2.378 CEP63 centrosomal protein 63kDa 3 135687264, 135687264, 135687586, 135687736 AK023738 3q22.2 Hs.443301 11

DNA damage checkpoint

spindle pole

protein binding

centrosome

spindle assembly

 
223572_at -0.441 10.499 -3.124 6.874e-03 0.143 -2.378 HHATL hedgehog acyltransferase-like 3 -42709159, -42709159 AB042554 3p22.1 Hs.476041 4

protein binding

endoplasmic reticulum

membrane

integral to membrane

negative regulation of N-terminal protein palmitoylation

 
228425_at 0.619 4.928 3.124 6.876e-03 0.143 -2.378 LOC654433 hypothetical LOC654433 2 113710316 BF056746 2q13 Hs.656660 4    
226567_at -0.424 8.468 -3.123 6.879e-03 0.143 -2.379 USP14 ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) 18 148482 BG283995 18p11.32 Hs.464416 Hs.707058 15

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

cytoplasm

ubiquitin-dependent protein catabolic process

tRNA guanylyltransferase activity

peptidase activity

 
225470_at -0.511 7.256 -3.123 6.891e-03 0.143 -2.381 NUP35 nucleoporin 35kDa 2 183697327 AL529634 2q32.1 Hs.180591 9

nucleus

nuclear pore

protein transport

mRNA transport

intracellular protein transmembrane transport

 
205037_at 0.327 6.350 3.121 6.915e-03 0.143 -2.384 RABL4 RAB, member of RAS oncogene family-like 4 22 -35484200 NM_006860 22q13.1 Hs.415172 6

nucleotide binding

GTP binding

small GTPase mediated signal transduction

 
225106_s_at -0.494 7.059 -3.121 6.920e-03 0.143 -2.384 OGFOD1 2-oxoglutarate and iron-dependent oxygenase domain containing 1 16 55042924 AK022130 16q12.2 Hs.231883 4

iron ion binding

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors

L-ascorbic acid binding

metal ion binding

oxidation reduction

 
203669_s_at -0.416 6.480 -3.121 6.921e-03 0.143 -2.384 DGAT1 diacylglycerol O-acyltransferase homolog 1 (mouse) 8 -145509054, 408762 NM_012079 8q24.3 Hs.571397 Hs.613075 22

diacylglycerol O-acyltransferase activity

diacylglycerol O-acyltransferase activity

endoplasmic reticulum

cytosol

acyltransferase activity

membrane

integral to membrane

transferase activity

triglyceride biosynthetic process

very-low-density lipoprotein particle assembly

Glycerolipid metabolism

Retinol metabolism

Metabolic pathways

227497_at -0.799 7.132 -3.120 6.928e-03 0.143 -2.385 SOX6 SRY (sex determining region Y)-box 6 11 -15944571, -15944571, -15944571 BE326808 11p15.3 Hs.368226 24

transcription factor activity

nucleus

chromatin organization

regulation of transcription, DNA-dependent

multicellular organismal development

muscle organ development

 
202259_s_at 0.942 6.344 3.120 6.929e-03 0.143 -2.385 N4BP2L2 NEDD4 binding protein 2-like 2 13 -31989029, -31904929 NM_014887 13q13.1 Hs.507680 4

molecular_function

cellular_component

biological_process

 
177_at 0.248 3.783 3.119 6.937e-03 0.143 -2.387 PLD1 phospholipase D1, phosphatidylcholine-specific 3 -172801311 U38545 3q26 Hs.382865 84

phospholipase D activity

protein binding

cytoplasm

endosome

endoplasmic reticulum

Golgi apparatus

chemotaxis

cell communication

Ras protein signal transduction

metabolic process

membrane

lipid catabolic process

hydrolase activity

phosphoinositide binding

perinuclear region of cytoplasm

NAPE-specific phospholipase D activity

Glycerophospholipid metabolism

Ether lipid metabolism

Metabolic pathways

Endocytosis

Fc gamma R-mediated phagocytosis

GnRH signaling pathway

Pathways in cancer

Pancreatic cancer

223109_at 0.400 6.478 3.119 6.941e-03 0.143 -2.387 TRUB2 TruB pseudouridine (psi) synthase homolog 2 (E. coli) 9 -130111216 BC001457 9q34.11 Hs.632685 7

pseudouridine synthesis

RNA binding

RNA processing

tRNA processing

pseudouridine synthase activity

isomerase activity

 
205247_at 0.424 6.980 3.119 6.944e-03 0.143 -2.388 NOTCH4 Notch homolog 4 (Drosophila) 6 -32270597, -3569804, -3377584 AI743713 6p21.3 Hs.436100 70

patterning of blood vessels

cell fate determination

morphogenesis of a branching structure

calcium ion binding

protein binding

extracellular space

nucleus

plasma membrane

integral to plasma membrane

Notch signaling pathway

JAK-STAT cascade

nervous system development

brain development

aging

embryonic development

basal plasma membrane

cell surface

hemopoiesis

mammary gland development

regulation of transcription

negative regulation of endothelial cell differentiation

positive regulation of transcription, DNA-dependent

protein heterodimerization activity

positive regulation of smooth muscle cell proliferation

advanced glycation end-product receptor activity

regulation of developmental process

Dorso-ventral axis formation

Notch signaling pathway

235980_at -0.475 5.834 -3.118 6.956e-03 0.143 -2.389 PIK3CA phosphoinositide-3-kinase, catalytic, alpha polypeptide 3 180349004 AA767763 3q26.3 Hs.553498 Hs.85701 259

nucleotide binding

inositol or phosphatidylinositol kinase activity

ATP binding

cytosol

phosphoinositide 3-kinase complex

glucose metabolic process

protein amino acid phosphorylation

anti-apoptosis

signal transduction

1-phosphatidylinositol-3-kinase activity

transferase activity

phosphotransferase activity, alcohol group as acceptor

lamellipodium

regulation of multicellular organism growth

protein kinase B signaling cascade

insulin receptor substrate binding

phosphoinositide phosphorylation

phosphatidylinositol-4,5-bisphosphate 3-kinase activity

phosphatidylinositol-4,5-bisphosphate 3-kinase activity

phosphoinositide-mediated signaling

Inositol phosphate metabolism

ErbB signaling pathway

Chemokine signaling pathway

Phosphatidylinositol signaling system

mTOR signaling pathway

Apoptosis

VEGF signaling pathway

Focal adhesion

Toll-like receptor signaling pathway

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Insulin signaling pathway

Type II diabetes mellitus

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Chronic myeloid leukemia

Acute myeloid leukemia

Small cell lung cancer

Non-small cell lung cancer

1557593_at -0.302 2.788 -3.118 6.961e-03 0.143 -2.390 SPAG17 sperm associated antigen 17 1 -118297810 AA250798 1p12 Hs.528821 7

protein binding

cytoplasm

microtubule

cilium

flagellum

flagellar axoneme

 
223694_at 0.375 9.492 3.118 6.963e-03 0.143 -2.390 TRIM7 tripartite motif-containing 7 5 -180562728, -180553529, -180553529, -180553529 AF220032 5q35.3 Hs.487412 7

protein binding

intracellular

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
223468_s_at -0.535 7.311 -3.118 6.963e-03 0.143 -2.390 RGMA RGM domain family, member A 15 -91387640 AL136826 15q26.1 Hs.271277 16

neural tube closure

endoplasmic reticulum

plasma membrane

cell surface

regulation of BMP signaling pathway

anchored to membrane

 
212761_at 0.314 7.824 3.116 6.983e-03 0.144 -2.393 TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 10 114699998 AI949687 10q25.3 Hs.593995 246

blood vessel development

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

anti-apoptosis

cell cycle arrest

beta-catenin binding

transcription factor binding

cell proliferation

positive regulation of specific transcription from RNA polymerase II promoter

positive regulation of heparan sulfate proteoglycan biosynthetic process

specific transcriptional repressor activity

protein kinase binding

pancreas development

positive regulation of insulin secretion

regulation of hormone metabolic process

glucose homeostasis

fat cell differentiation

regulation of transcription

myoblast cell fate commitment

Wnt receptor signaling pathway through beta-catenin

beta-catenin-TCF7L2 complex

Wnt signaling pathway

Adherens junction

Melanogenesis

Pathways in cancer

Colorectal cancer

Endometrial cancer

Prostate cancer

Thyroid cancer

Basal cell carcinoma

Acute myeloid leukemia

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

212463_at -0.375 9.391 -3.116 6.987e-03 0.144 -2.393 CD59 CD59 molecule, complement regulatory protein 11 -33681131, -33681131, -33681131 BE379006 11p13 Hs.278573 Hs.709466 Hs.710641 107

protein binding

extracellular region

membrane fraction

plasma membrane

cell surface receptor linked signal transduction

blood coagulation

anchored to membrane

anchored to external side of plasma membrane

Complement and coagulation cascades

Hematopoietic cell lineage

204969_s_at -0.586 5.074 -3.116 6.990e-03 0.144 -2.394 RDX radixin 11 -109605375 NM_002906 11q23 Hs.263671 Hs.592679 46

ruffle

actin binding

cytoplasm

cytoskeleton

plasma membrane

extrinsic to membrane

lamellipodium

microvillus assembly

filopodium

stereocilium

apical protein localization

apical part of cell

actin filament capping

Regulation of actin cytoskeleton

201734_at -0.491 8.373 -3.115 6.994e-03 0.144 -2.394 CLCN3 chloride channel 3 4 170778296 AI760629 4q33 Hs.481186 28

nucleotide binding

ion channel activity

voltage-gated chloride channel activity

protein binding

ATP binding

early endosome

early endosome

late endosome

late endosome

Golgi apparatus

Golgi apparatus

ion transport

chloride transport

regulation of pH

cell surface

vesicle membrane

vesicle membrane

antiporter activity

membrane

integral to membrane

PDZ domain binding

PDZ domain binding

chloride ion binding

cytoplasmic vesicle

protein homodimerization activity

protein heterodimerization activity

protein heterodimerization activity

endosomal lumen acidification

 
209395_at 0.413 2.365 3.115 6.997e-03 0.144 -2.395 CHI3L1 chitinase 3-like 1 (cartilage glycoprotein-39) 1 -201414681 M80927 1q32.1 Hs.382202 71

catalytic activity

chitinase activity

extracellular matrix structural constituent

sugar binding

extracellular region

proteinaceous extracellular matrix

extracellular space

carbohydrate metabolic process

chitin catabolic process

cation binding

 
201878_at -0.490 7.485 -3.115 7.001e-03 0.144 -2.395 ARIH1 ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila) 15 70553720 N25546 15q24 Hs.268787 11

ubiquitin ligase complex

protein binding

cytoplasm

ubiquitin-dependent protein catabolic process

zinc ion binding

small conjugating protein ligase activity

metal ion binding

 
240449_at -0.492 5.332 -3.114 7.008e-03 0.144 -2.396 ZNF341 zinc finger protein 341 20 31783468 AW204518 20q11.22 Hs.516989 4

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
203167_at 0.257 4.631 3.114 7.011e-03 0.144 -2.396 TIMP2 TIMP metallopeptidase inhibitor 2 17 -74360653 NM_003255 17q25 Hs.633514 168

enzyme inhibitor activity

integrin binding

protein binding

extracellular region

basement membrane

enzyme activator activity

metalloendopeptidase inhibitor activity

negative regulation of cell proliferation

cell surface

regulation of cAMP metabolic process

regulation of MAPKKK cascade

regulation of neuron differentiation

 
218966_at 0.467 6.083 3.114 7.012e-03 0.144 -2.397 MYO5C myosin VC 15 -50271811 NM_018728 15q21 Hs.487036 6

nucleotide binding

motor activity

calmodulin binding

ATP binding

myosin complex

actin filament binding

 
211563_s_at -0.818 6.715 -3.114 7.019e-03 0.144 -2.397 C19orf2 chromosome 19 open reading frame 2 19 35125264 AB006572 19q12 Hs.466391 11

transcription corepressor activity

nucleus

DNA-directed RNA polymerase II, core complex

cytoplasm

regulation of transcription from RNA polymerase II promoter

protein folding

response to virus

prefoldin complex

unfolded protein binding

 
203340_s_at -0.606 9.488 -3.113 7.023e-03 0.144 -2.398 SLC25A12 solute carrier family 25 (mitochondrial carrier, Aralar), member 12 2 -172348160 NM_003705 2q24 Hs.470608 27

transporter activity

L-glutamate transmembrane transporter activity

calcium ion binding

protein binding

mitochondrion

mitochondrial inner membrane

transport

L-aspartate transmembrane transporter activity

aspartate transport

L-glutamate transport

membrane

integral to membrane

malate-aspartate shuttle

response to calcium ion

 
217515_s_at -0.346 9.542 -3.113 7.030e-03 0.144 -2.399 CACNA1S calcium channel, voltage-dependent, L type, alpha 1S subunit 1 -199275262 AI391509 1q32 Hs.1294 33

voltage-gated ion channel activity

calcium ion binding

cytoplasm

plasma membrane

voltage-gated calcium channel complex

ion transport

calcium ion transport

muscle contraction

high voltage-gated calcium channel activity

dihydropyridine-sensitive calcium channel activity

integral to membrane

T-tubule

I band

MAPK signaling pathway

Calcium signaling pathway

Cardiac muscle contraction

Vascular smooth muscle contraction

GnRH signaling pathway

Alzheimer's disease

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

210982_s_at 0.946 8.024 3.113 7.030e-03 0.144 -2.399 HLA-DRA major histocompatibility complex, class II, DR alpha 6 32515624, 3814608, 3622461 M60333 6p21.3 Hs.520048 134

antigen processing and presentation of peptide or polysaccharide antigen via MHC class II

lysosome

plasma membrane

plasma membrane

integral to plasma membrane

immune response

MHC class II receptor activity

MHC class II protein complex

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Hematopoietic cell lineage

Type I diabetes mellitus

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

228480_at -0.545 6.708 -3.113 7.034e-03 0.144 -2.399 VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 18 9903954 AW296039 18p11.22 Hs.699980 18

signal transducer activity

structural molecule activity

protein binding

membrane fraction

endoplasmic reticulum

microtubule

plasma membrane

tight junction

membrane fusion

integral to membrane

vesicle

positive regulation of I-kappaB kinase/NF-kappaB cascade

protein heterodimerization activity

perinuclear region of cytoplasm

Tight junction

221006_s_at -0.345 5.976 -3.112 7.039e-03 0.144 -2.400 SNX27 sorting nexin family member 27 1 149851285 NM_030918 1q21.3 Hs.192326 13

protein binding

cytoplasm

early endosome

cytosol

signal transduction

protein transport

phosphoinositide binding

 
215499_at -0.633 9.338 -3.112 7.040e-03 0.144 -2.400 MAP2K3 mitogen-activated protein kinase kinase 3 17 21128560, 21135373 AA780381 17q11.2 Hs.514012 45

nucleotide binding

activation of MAPK activity

protein serine/threonine kinase activity

MAP kinase kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

inflammatory response

signal transduction

transferase activity

regulation of cytokine biosynthetic process

positive regulation of protein kinase activity

positive regulation of transcription, DNA-dependent

cardiac muscle contraction

MAPK signaling pathway

Toll-like receptor signaling pathway

Fc epsilon RI signaling pathway

GnRH signaling pathway

Amyotrophic lateral sclerosis (ALS)

225181_at -0.630 7.692 -3.112 7.044e-03 0.144 -2.401 ARID1B AT rich interactive domain 1B (SWI1-like) 6 157140777 BE463648 6q25.1 Hs.291587 Hs.714899 22

DNA binding

DNA binding

transcription coactivator activity

protein binding

intracellular

nucleus

nucleolus

cytoplasm

SWI/SNF complex

chromatin modification

regulation of transcription

chromatin-mediated maintenance of transcription

 
238577_s_at 0.341 2.850 3.112 7.046e-03 0.144 -2.401 TSHZ2 teashirt zinc finger homeobox 2 20 51022283 AA628481 20q13.2 Hs.271605 Hs.473117 Hs.649877 6

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

sequence-specific DNA binding

metal ion binding

 
203934_at 0.558 6.042 3.112 7.047e-03 0.144 -2.401 KDR kinase insert domain receptor (a type III receptor tyrosine kinase) 4 -55639183 NM_002253 4q11-q12 Hs.479756 264

nucleotide binding

angiogenesis

ovarian follicle development

vasculogenesis

positive regulation of mesenchymal cell proliferation

receptor activity

vascular endothelial growth factor receptor activity

ATP binding

integral to plasma membrane

protein amino acid phosphorylation

multicellular organismal development

regulation of cell shape

membrane

transferase activity

growth factor binding

hemopoiesis

positive regulation of cell migration

surfactant homeostasis

interspecies interaction between organisms

cell fate commitment

endothelial cell differentiation

vascular endothelial growth factor receptor signaling pathway

lung alveolus development

cell maturation

branching morphogenesis of a tube

positive regulation of epithelial cell proliferation

positive regulation of positive chemotaxis

calcium ion homeostasis

Cytokine-cytokine receptor interaction

Endocytosis

VEGF signaling pathway

Focal adhesion

210211_s_at -0.383 11.097 -3.112 7.049e-03 0.144 -2.401 HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 14 -101616827, -101616827 AF028832 14q32.33 Hs.525600 Hs.700831 275

nucleotide binding

ATP binding

cytoplasm

cytosol

cytosol

mitochondrial transport

response to unfolded protein

signal transduction

nitric-oxide synthase regulator activity

TPR domain binding

TPR domain binding

cellular chaperone-mediated protein complex assembly

protein refolding

melanosome

protein homodimerization activity

positive regulation of nitric oxide biosynthetic process

unfolded protein binding

mitochondrial outer membrane translocase complex assembly

Antigen processing and presentation

Pathways in cancer

Prostate cancer

206843_at -0.286 4.409 -3.111 7.058e-03 0.144 -2.403 CRYBA4 crystallin, beta A4 22 25347927 NM_001886 22q11.2-q13.1 22q12.1 Hs.57690 13

molecular_function

structural constituent of eye lens

soluble fraction

visual perception

visual perception

camera-type eye development

 
1553269_at 0.597 3.389 3.110 7.076e-03 0.144 -2.405 ZNF718 zinc finger protein 718 4 43276 CA411757 4p16.3 Hs.428579 Hs.636638 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
224942_at 0.314 3.710 3.109 7.083e-03 0.144 -2.406 PAPPA pregnancy-associated plasma protein A, pappalysin 1 9 117955891 BG434272 9q33.2 Hs.643599 Hs.713596 86

extracellular region

extracellular region

proteolysis

female pregnancy

peptidase activity

metallopeptidase activity

metallopeptidase activity

zinc ion binding

membrane

cell differentiation

metal ion binding

 
203575_at -0.316 7.110 -3.109 7.083e-03 0.144 -2.406 CSNK2A2 casein kinase 2, alpha prime polypeptide 16 -56749312 NM_001896 16q21 Hs.82201 143

nucleotide binding

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

Wnt receptor signaling pathway

transferase activity

protein N-terminus binding

regulation of cell cycle

Wnt signaling pathway

Adherens junction

Tight junction

200836_s_at -0.407 8.420 -3.109 7.084e-03 0.144 -2.406 MAP4 microtubule-associated protein 4 3 -47989573, -47867183, -47867183 NM_002375 3p21 Hs.517949 40

structural molecule activity

protein binding

microtubule

microtubule associated complex

negative regulation of microtubule depolymerization

 
209485_s_at -0.314 9.487 -3.109 7.090e-03 0.144 -2.407 OSBPL1A oxysterol binding protein-like 1A 18 -19996008, -19996008 W19983 18q11.1 Hs.370725 12

phospholipid binding

intracellular

lipid transport

steroid metabolic process

cholesterol metabolic process

vesicle-mediated transport

 
225793_at -0.425 7.860 -3.108 7.098e-03 0.144 -2.408 LIX1L Lix1 homolog (mouse)-like 1 144188441 AW500180 1q21.1 Hs.632435 2    
1552899_at 0.474 4.863 3.108 7.102e-03 0.144 -2.408 RP4-662A9.2 hypothetical protein MGC34034 6 134183977 NM_153224 6q23.2 Hs.126165 1    
223567_at 0.265 3.275 3.108 7.102e-03 0.144 -2.408 SEMA6B sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B 19 -4493599 AB022433 19p13.3 Hs.465642 4

receptor activity

multicellular organismal development

nervous system development

membrane

integral to membrane

cell differentiation

Axon guidance

212041_at -0.421 8.805 -3.108 7.107e-03 0.144 -2.409 ATP6V0D1 ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1 16 -66029417 AL566172 16q22 Hs.106876 21

protein binding

ion transport

hydrogen-exporting ATPase activity, phosphorylative mechanism

ATP synthesis coupled proton transport

proton transport

membrane

vacuolar proton-transporting V-type ATPase complex

vacuolar proton-transporting V-type ATPase complex

proton-transporting V-type ATPase, V0 domain

Oxidative phosphorylation

Metabolic pathways

Lysosome

Vibrio cholerae infection

Epithelial cell signaling in Helicobacter pylori infection

219355_at 0.561 5.146 3.107 7.113e-03 0.144 -2.410 CXorf57 chromosome X open reading frame 57 X 105741815 NM_018015 Xq22.3 Hs.274267 5    
209234_at -1.102 7.572 -3.107 7.116e-03 0.144 -2.410 KIF1B kinesin family member 1B 1 10193350, 10193350 BF939474 1p36.2 Hs.97858 33

nucleotide binding

microtubule motor activity

protein binding

ATP binding

cytoplasm

mitochondrion

cytoskeleton

microtubule

microtubule associated complex

microtubule-based movement

nerve-nerve synaptic transmission

neuromuscular synaptic transmission

anterograde axon cargo transport

ATPase activity

kinesin binding

cytoplasmic vesicle membrane

cytoskeleton-dependent intracellular transport

cytoplasmic vesicle

 
224478_s_at 0.495 7.075 3.107 7.116e-03 0.144 -2.410 C7orf50 chromosome 7 open reading frame 50 7 -1003148 BC006224 7p22.3 Hs.653258 5    
217745_s_at -0.451 10.216 -3.107 7.120e-03 0.144 -2.411 NAT13 N-acetyltransferase 13 (GCN5-related) 3 -114920530 NM_025146 3q13.2 Hs.596074 5

protein binding

cytoplasm

N-terminal protein amino acid acetylation

N-acetyltransferase activity

metabolic process

acyltransferase activity

transferase activity

 
224514_x_at 0.391 5.304 3.106 7.124e-03 0.144 -2.411 IL17RC interleukin 17 receptor C 3 9933763 BC006411 3p25.3 3p25.3-p24.1 Hs.129959 14

receptor activity

plasma membrane

integral to membrane

 
218120_s_at 0.399 6.908 3.106 7.125e-03 0.144 -2.411 HMOX2 heme oxygenase (decycling) 2 16 4464719, 4466341, 4485859 D21243 16p13.3 Hs.284279 32

response to hypoxia

heme oxygenase (decyclizing) activity

iron ion binding

protein binding

endoplasmic reticulum

microsome

plasma membrane

heme oxidation

electron carrier activity

oxidoreductase activity

metal ion binding

oxidation reduction

Porphyrin and chlorophyll metabolism

225030_at -0.436 8.420 -3.106 7.128e-03 0.144 -2.412 BOD1 biorientation of chromosomes in cell division 1 5 -172966753 AA824341 5q35.2 Hs.425091 4    
223016_x_at -0.465 7.617 -3.106 7.132e-03 0.144 -2.412 ZRANB2 zinc finger, RAN-binding domain containing 2 1 -71301561 AF065392 1p31 Hs.194718 18

transcription factor activity

RNA binding

protein binding

intracellular

nucleus

mRNA processing

zinc ion binding

RNA splicing

metal ion binding

 
212910_at -0.462 7.578 -3.105 7.142e-03 0.144 -2.413 THAP11 THAP domain containing 11 16 66433713 W19873 16q22.1 Hs.632200 7

DNA binding

nucleus

cytoplasm

zinc ion binding

identical protein binding

regulation of transcription

metal ion binding

 
231522_at 0.237 3.777 3.105 7.146e-03 0.144 -2.414 C20orf144 chromosome 20 open reading frame 144 20 31713780 AA776747 20q11.22 Hs.324104 3    
231114_at 0.578 2.627 3.105 7.146e-03 0.144 -2.414 SPATA22 spermatogenesis associated 22 17 -3290063 BF438413 17p13.3 Hs.351068 3    
206981_at -0.468 7.705 -3.104 7.154e-03 0.144 -2.415 SCN4A sodium channel, voltage-gated, type IV, alpha subunit 17 -59369645 NM_000334 17q23-q25.3 Hs.46038 65

voltage-gated sodium channel complex

voltage-gated ion channel activity

voltage-gated sodium channel activity

ion transport

sodium ion transport

muscle contraction

membrane

sodium ion binding

 
221189_s_at 0.276 6.993 3.104 7.158e-03 0.144 -2.416 TARS2 threonyl-tRNA synthetase 2, mitochondrial (putative) 1 148726543 NM_025150 1q21.3 Hs.288974 8

nucleotide binding

threonine-tRNA ligase activity

ATP binding

cytoplasm

mitochondrion

mitochondrial matrix

threonyl-tRNA aminoacylation

ligase activity

Aminoacyl-tRNA biosynthesis

212229_s_at -0.503 8.773 -3.104 7.161e-03 0.144 -2.416 FBXO21 F-box protein 21 12 -116065967 AK001699 12q24.22 Hs.719089 7

ubiquitin ligase complex

ubiquitin-protein ligase activity

ubiquitin-dependent protein catabolic process

 
1555864_s_at 0.288 10.969 3.104 7.161e-03 0.144 -2.416 PDHA1 pyruvate dehydrogenase (lipoamide) alpha 1 X 19271931 AW057819 Xp22.2-p22.1 Hs.530331 54

pyruvate dehydrogenase (acetyl-transferring) activity

protein binding

mitochondrion

mitochondrial matrix

glycolysis

oxidoreductase activity

oxidation reduction

Glycolysis / Gluconeogenesis

Citrate cycle (TCA cycle)

Valine, leucine and isoleucine biosynthesis

Pyruvate metabolism

Butanoate metabolism

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

204631_at -0.830 13.478 -3.104 7.164e-03 0.144 -2.416 MYH2 myosin, heavy chain 2, skeletal muscle, adult 17 -10365189, -10365189 NM_017534 17p13.1 Hs.699445 22

microfilament motor activity

nucleotide binding

actin binding

calmodulin binding

ATP binding

nucleolus

cytoplasm

striated muscle thick filament

focal adhesion

striated muscle contraction

structural constituent of muscle

myosin complex

muscle filament sliding

Tight junction

1557820_at -0.352 10.500 -3.102 7.188e-03 0.145 -2.419 AFG3L2 AFG3 ATPase family gene 3-like 2 (yeast) 18 -12319107 AA905788 18p11 Hs.528996 5

nucleotide binding

metalloendopeptidase activity

ATP binding

mitochondrion

mitochondrial inner membrane

proteolysis

axonogenesis

neuromuscular junction development

peptidase activity

zinc ion binding

membrane

integral to membrane

death

nucleoside-triphosphatase activity

nerve development

regulation of multicellular organism growth

myelination

metal ion binding

muscle fiber development

unfolded protein binding

righting reflex

 
242463_x_at 0.426 3.891 3.102 7.188e-03 0.145 -2.419 ZNF600 zinc finger protein 600 19 -57960559 AI620827 19q13.41 Hs.696848 2

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
235025_at -0.348 2.571 -3.102 7.189e-03 0.145 -2.419 WDR89 WD repeat domain 89 14 -63133509, -63133509 AW196959 14q23.2 Hs.655666 6    
224574_at 0.442 7.094 3.102 7.190e-03 0.145 -2.420 C17orf49 chromosome 17 open reading frame 49 17 6858796 AV759602 17p13.1 Hs.511801 7

DNA binding

nucleus

 
238332_at 0.508 4.681 3.102 7.191e-03 0.145 -2.420 ANKRD29 ankyrin repeat domain 29 18 -19433975 AI307802 18q11.2 Hs.374774 4    
209027_s_at -0.465 5.959 -3.102 7.191e-03 0.145 -2.420 ABI1 abl-interactor 1 10 -27075530 BF673013 10p11.2 Hs.508148 39

intracellular

soluble fraction

nucleus

cytoplasm

endoplasmic reticulum

cytosol

cytoskeleton

transmembrane receptor protein tyrosine kinase signaling pathway

cytoskeletal protein binding

negative regulation of cell proliferation

peptidyl-tyrosine phosphorylation

synaptosome

lamellipodium

cell junction

filopodium

growth cone

synapse

 
205422_s_at 0.587 4.355 3.102 7.193e-03 0.145 -2.420 ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) 13 100902966 NM_004791 13q33 Hs.696554 5

receptor activity

binding

extracellular region

cell adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

integrin complex

 
235049_at 0.412 5.891 3.101 7.199e-03 0.145 -2.421 ADCY1 adenylate cyclase 1 (brain) 7 45580649 AA021120 7p13-p12 Hs.192215 24

nucleotide binding

magnesium ion binding

calmodulin binding

ATP binding

cAMP biosynthetic process

long-term memory

calcium- and calmodulin-responsive adenylate cyclase activity

hormone-mediated signaling

membrane

integral to membrane

Purine metabolism

Calcium signaling pathway

Chemokine signaling pathway

Vascular smooth muscle contraction

Gap junction

Long-term potentiation

GnRH signaling pathway

Melanogenesis

1555906_s_at -0.669 6.472 -3.100 7.212e-03 0.145 -2.422 C3orf23 chromosome 3 open reading frame 23 3 44354614, 44354947, 44354947 AI147556 3p21.31 Hs.55131 8

mitochondrion

 
214266_s_at -0.522 7.183 -3.100 7.214e-03 0.145 -2.423 PDLIM7 PDZ and LIM domain 7 (enigma) 5 -176849852, -176843000 AW206786 5q35.3 Hs.533040 22

ossification

protein binding

cytoplasm

cytoskeleton

receptor-mediated endocytosis

multicellular organismal development

zinc ion binding

cell differentiation

metal ion binding

 
227530_at 0.498 5.881 3.100 7.215e-03 0.145 -2.423 AKAP12 A kinase (PRKA) anchor protein 12 6 151602826, 151688358 BF511276 6q24-q25 Hs.371240 33

nucleus

cytoplasm

cytoskeleton

plasma membrane

cell cortex

protein targeting

signal transduction

G-protein coupled receptor protein signaling pathway

protein kinase A binding

 
223334_at 0.453 10.036 3.100 7.215e-03 0.145 -2.423 TMEM126A transmembrane protein 126A 11 85036692 AL136941 11q14.1 Hs.533725 8

molecular_function

mitochondrion

biological_process

membrane

integral to membrane

 
221606_s_at -0.498 5.373 -3.100 7.217e-03 0.145 -2.423 NSBP1 nucleosomal binding protein 1 X -80255855 BC005342 Xq13.3 Hs.282204 7

chromatin

DNA binding

chromatin binding

nucleus

nucleoplasm

nucleolus

regulation of transcription from RNA polymerase I promoter

transcription activator activity

 
230384_at -0.762 7.912 -3.100 7.221e-03 0.145 -2.424 ANKRD23 ankyrin repeat domain 23 2 -96867377 AI866797 2q11.2 Hs.643430 8

nucleus

 
204350_s_at -0.330 7.296 -3.099 7.231e-03 0.145 -2.425 MED7 mediator complex subunit 7 5 -156498028, -156498028 NM_004270 5q33.3 Hs.279902 Hs.719330 15

transcription coactivator activity

protein binding

nucleus

transcription factor complex

regulation of transcription from RNA polymerase II promoter

transcription initiation from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

transcription regulator activity

regulation of transcription

 
234533_at 0.306 4.735 3.099 7.234e-03 0.145 -2.425 BCL2L14 BCL2-like 14 (apoptosis facilitator) 12 12115144, 12115668 AK026440 12p13-p12 Hs.210343 13

protein binding

cytoplasm

cytosol

membrane

regulation of apoptosis

intracellular organelle

 
212681_at 0.976 4.830 3.099 7.234e-03 0.145 -2.425 EPB41L3 erythrocyte membrane protein band 4.1-like 3 18 -5382387 AI770004 18p11.32 Hs.213394 39

actin binding

structural molecule activity

cytoplasm

cytoskeleton

plasma membrane

cell-cell junction

biological_process

extrinsic to membrane

cortical actin cytoskeleton organization

Tight junction

203054_s_at 0.333 6.651 3.099 7.235e-03 0.145 -2.425 TCTA T-cell leukemia translocation altered gene 3 49424642 NM_022171 3p21 Hs.517962 6    
226545_at 0.479 5.543 3.099 7.238e-03 0.145 -2.426 CD109 CD109 molecule 6 74462228, 74462234 AL110152 6q13 Hs.399891 24

serine-type endopeptidase inhibitor activity

protein binding

extracellular region

extracellular space

plasma membrane

anchored to membrane

 
230804_at -0.446 2.494 -3.099 7.238e-03 0.145 -2.426 NKAPL NFKB activating protein-like 6 28335076 AA902654 6p22.1 Hs.239181 3    
217714_x_at 0.338 6.308 3.099 7.239e-03 0.145 -2.426 STMN1 stathmin 1 1 -26099193, -26099193, -26099193, -26083264 AV756729 1p36.1-p35 Hs.209983 80

signal transducer activity

protein binding

intracellular

cytoplasm

microtubule

microtubule depolymerization

mitotic spindle organization

intracellular signaling cascade

multicellular organismal development

nervous system development

tubulin binding

membrane

integral to membrane

cell differentiation

MAPK signaling pathway

226843_s_at -0.310 6.773 -3.099 7.241e-03 0.145 -2.426 PAPD5 PAP associated domain containing 5 16 48745568 AU146704 16q12.1 Hs.514342 5

molecular_function

DNA binding

DNA-directed DNA polymerase activity

cellular_component

nucleus

DNA replication

cell cycle

mitosis

biological_process

transferase activity

nucleotidyltransferase activity

cell division

 
1552739_s_at -0.262 5.334 -3.098 7.247e-03 0.145 -2.427 ST7L suppression of tumorigenicity 7 like 1 -112885935, -112867663 NM_138729 1p13.2 Hs.201921 6

membrane

integral to membrane

 
226615_at -0.405 6.555 -3.098 7.250e-03 0.145 -2.427 XPR1 xenotropic and polytropic retrovirus receptor 1 178867768 BE439489 1q25.1 Hs.227656 6

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

G-protein coupled receptor protein signaling pathway

 
232298_at -0.849 7.873 -3.097 7.258e-03 0.145 -2.428 hCG_1806964 hypothetical LOC401093 3 -153463102 AK026494 3q25.1 Hs.201858 Hs.558914 Hs.719379 3    
235260_s_at -0.665 5.641 -3.097 7.265e-03 0.145 -2.429 PACRGL PARK2 co-regulated-like 4 20311133 AA398590 4p15.31 Hs.479298 5

binding

 
206351_s_at 0.338 5.011 3.097 7.266e-03 0.145 -2.429 PEX10 peroxisomal biogenesis factor 10 1 -2326100 NM_002617 1p36.32 Hs.591454 16

protein binding

peroxisome

peroxisomal membrane

peroxisome organization

zinc ion binding

membrane

protein import into peroxisome matrix

metal ion binding

 
204123_at 0.286 5.467 3.096 7.278e-03 0.145 -2.431 LIG3 ligase III, DNA, ATP-dependent 17 30331650, 30331650 NM_013975 17q11.2-q12 Hs.100299 45

nucleotide binding

magnesium ion binding

DNA binding

DNA ligase (ATP) activity

protein binding

ATP binding

intracellular

nucleus

nucleoplasm

DNA replication

DNA repair

response to DNA damage stimulus

cell cycle

reciprocal meiotic recombination

spermatogenesis

zinc ion binding

ligase activity

V(D)J recombination

cell division

Base excision repair

203016_s_at -0.568 5.926 -3.096 7.279e-03 0.145 -2.431 SSX2IP synovial sarcoma, X breakpoint 2 interacting protein 1 -84882184 AK001710 1p22.3 Hs.22587 14

protein binding

nucleus

adherens junction

cell adhesion

cell junction

protein complex

Adherens junction

212465_at -0.423 9.209 -3.096 7.280e-03 0.145 -2.431 SETD3 SET domain containing 3 14 -98945893, -98933835 AA524500 14q32.2 Hs.510407 6    
204496_at -0.452 8.897 -3.096 7.283e-03 0.145 -2.431 STRN3 striatin, calmodulin binding protein 3 14 -30432755 NM_014574 14q13-q21 Hs.21016 Hs.401843 13

calmodulin binding

membrane fraction

nucleus

cytoplasm

cytosol

cell cycle

membrane

 
225063_at 0.362 7.547 3.096 7.284e-03 0.145 -2.432 UBL7 ubiquitin-like 7 (bone marrow stromal cell-derived) 15 -72525370, -72525370 BF568780 15q24.1 Hs.334713 7

protein binding

modification-dependent protein catabolic process

 
204352_at 0.446 4.857 3.095 7.290e-03 0.145 -2.432 TRAF5 TNF receptor-associated factor 5 1 209566579, 209566770, 209586328 NM_004619 1q32 Hs.523930 52

signal transducer activity

protein binding

cytoplasm

centrosome

signal transduction

zinc ion binding

positive regulation of cell proliferation

regulation of apoptosis

positive regulation of I-kappaB kinase/NF-kappaB cascade

metal ion binding

Pathways in cancer

Small cell lung cancer

1553113_s_at -0.666 5.357 -3.094 7.301e-03 0.145 -2.434 CDK8 cyclin-dependent kinase 8 13 25726755 BF700678 13q12 Hs.382306 38

nucleotide binding

cyclin-dependent protein kinase activity

protein binding

ATP binding

nucleus

protein amino acid phosphorylation

RNA polymerase II carboxy-terminal domain kinase activity

transferase activity

regulation of transcription

 
55872_at 0.506 6.330 3.094 7.301e-03 0.145 -2.434 ZNF512B zinc finger protein 512B 20 -62058498 AI493119 20q13.33 Hs.551552 5

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
200999_s_at 0.484 7.516 3.094 7.310e-03 0.145 -2.435 CKAP4 cytoskeleton-associated protein 4 12 -105155789 NM_006825 12q23.3 Hs.714862 Hs.74368 22

membrane fraction

endoplasmic reticulum

membrane

integral to membrane

 
203071_at 0.307 5.086 3.094 7.310e-03 0.145 -2.435 SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B 3 50280043 NM_004636 3p21.3 Hs.82222 22

receptor activity

extracellular region

endoplasmic reticulum

cell-cell signaling

multicellular organismal development

axon guidance

membrane

Axon guidance

222826_at -0.518 6.780 -3.093 7.325e-03 0.145 -2.437 PLDN pallidin homolog (mouse) 15 43666708 BC004819 15q21.1 Hs.719102 17

cellular_component

cytoplasm

endosome

membrane fusion

blood coagulation

membrane

synaptic vesicle docking during exocytosis

melanocyte differentiation

syntaxin-13 binding

positive regulation of natural killer cell activation

secretion of lysosomal enzymes

identical protein binding

pigmentation

 
210203_at -0.666 5.704 -3.093 7.325e-03 0.145 -2.437 CNOT4 CCR4-NOT transcription complex, subunit 4 7 -134723303, -134697088 R64001 7q22-qter Hs.490224 7

nucleotide binding

RNA binding

protein binding

nucleus

cytoplasm

zinc ion binding

ligase activity

modification-dependent protein catabolic process

regulation of transcription

metal ion binding

RNA degradation

45526_g_at -0.483 8.498 -3.092 7.346e-03 0.146 -2.439 NAT15 N-acetyltransferase 15 (GCN5-related, putative) 16 3433668, 3447992 AI246641 16p13.3 Hs.513296 6

N-acetyltransferase activity

metabolic process

acyltransferase activity

transferase activity

 
225878_at -0.481 11.479 -3.091 7.351e-03 0.146 -2.440 KIF1B kinesin family member 1B 1 10193350, 10193350 AL135264 1p36.2 Hs.97858 33

nucleotide binding

microtubule motor activity

protein binding

ATP binding

cytoplasm

mitochondrion

cytoskeleton

microtubule

microtubule associated complex

microtubule-based movement

nerve-nerve synaptic transmission

neuromuscular synaptic transmission

anterograde axon cargo transport

ATPase activity

kinesin binding

cytoplasmic vesicle membrane

cytoskeleton-dependent intracellular transport

cytoplasmic vesicle

 
207543_s_at -0.570 8.070 -3.091 7.353e-03 0.146 -2.440 P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 10 -74436987 NM_000917 10q21.3-q23.1 Hs.500047 Hs.593005 19

procollagen-proline 4-dioxygenase activity

binding

iron ion binding

mitochondrion

endoplasmic reticulum

endoplasmic reticulum lumen

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

L-ascorbic acid binding

metal ion binding

oxidation reduction

Arginine and proline metabolism

Metabolic pathways

221227_x_at 0.309 8.085 3.091 7.355e-03 0.146 -2.440 COQ3 coenzyme Q3 homolog, methyltransferase (S. cerevisiae) 6 -99924068 NM_017421 6q16.2 Hs.713623 6

hexaprenyldihydroxybenzoate methyltransferase activity

mitochondrion

mitochondrial matrix

glycerol metabolic process

ubiquinone biosynthetic process

metabolic process

O-methyltransferase activity

2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity

transferase activity

Ubiquinone and other terpenoid-quinone biosynthesis

Metabolic pathways

1553387_at -0.301 3.118 -3.091 7.359e-03 0.146 -2.441 ATM ataxia telangiectasia mutated 11 107598768, 107663328 NM_138293 11q22-q23 Hs.367437 504

nucleotide binding

DNA binding

protein serine/threonine kinase activity

ATP binding

nucleus

nucleoplasm

DNA repair

response to DNA damage stimulus

cell cycle

mitotic cell cycle spindle assembly checkpoint

reciprocal meiotic recombination

signal transduction

cell death

response to ionizing radiation

1-phosphatidylinositol-3-kinase activity

transferase activity

cytoplasmic vesicle

protein N-terminus binding

Cell cycle

p53 signaling pathway

Apoptosis

1567458_s_at -0.712 7.595 -3.090 7.363e-03 0.146 -2.441 RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 7 6380650 AJ012502 7p22 Hs.413812 406

nucleotide binding

GTPase activity

GTP binding

intracellular

cytosol

plasma membrane

cell motion

inflammatory response

cell adhesion

small GTPase mediated signal transduction

anatomical structure morphogenesis

regulation of hydrogen peroxide metabolic process

positive regulation of lamellipodium assembly

enzyme binding

actin filament polymerization

GTP-dependent protein binding

ruffle organization

positive regulation of Rho protein signal transduction

melanosome

negative regulation of receptor-mediated endocytosis

localization within membrane

regulation of respiratory burst

MAPK signaling pathway

Chemokine signaling pathway

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Focal adhesion

Adherens junction

Toll-like receptor signaling pathway

Natural killer cell mediated cytotoxicity

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Amyotrophic lateral sclerosis (ALS)

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

218611_at -0.887 7.569 -3.090 7.368e-03 0.146 -2.442 IER5 immediate early response 5 1 179324260 NM_016545 1q25.3 Hs.716489 8    
241208_at -1.053 6.986 -3.090 7.368e-03 0.146 -2.442 PDLIM5 PDZ and LIM domain 5 4 95592060, 95592060 AI808578 4q22 Hs.480311 34

actin binding

protein kinase C binding

protein binding

membrane fraction

cytosol

zinc ion binding

actin cytoskeleton

Z disc

actinin binding

metal ion binding

 
226776_at -0.896 6.247 -3.090 7.371e-03 0.146 -2.442 ENY2 enhancer of yellow 2 homolog (Drosophila) 8 110415811 BF433516 8q23.1 Hs.492555 5

SAGA complex

nucleus

transport

chromatin modification

histone deubiquitination

ligand-dependent nuclear receptor transcription coactivator activity

regulation of transcription

positive regulation of transcription, DNA-dependent

mRNA transport

 
204512_at -0.364 4.667 -3.090 7.373e-03 0.146 -2.443 HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 6 12120709 NM_002114 6p24-p22.3 Hs.567284 16

DNA binding

protein binding

intracellular

nucleus

cytoplasm

zinc ion binding

regulation of transcription

metal ion binding

 
202449_s_at -0.458 8.557 -3.090 7.374e-03 0.146 -2.443 RXRA retinoid X receptor, alpha 9 136358136 NM_002957 9q34.3 Hs.590886 190

transcription factor activity

ligand-regulated transcription factor activity

steroid hormone receptor activity

transcription coactivator activity

retinoid-X receptor activity

steroid binding

protein binding

nucleus

regulation of transcription, DNA-dependent

vitamin metabolic process

cholesterol metabolic process

zinc ion binding

response to retinoic acid

vitamin D receptor binding

sequence-specific DNA binding

interspecies interaction between organisms

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

retinoic acid receptor signaling pathway

ventricular cardiac muscle morphogenesis

ventricular cardiac muscle cell differentiation

cardiac muscle cell proliferation

vitamin D response element binding

PPAR signaling pathway

Adipocytokine signaling pathway

Pathways in cancer

Thyroid cancer

Small cell lung cancer

Non-small cell lung cancer

207618_s_at 0.335 7.659 3.090 7.375e-03 0.146 -2.443 BCS1L BCS1-like (yeast) 2 219232622 NM_004328 2q33 Hs.471401 20

nucleotide binding

protein binding

ATP binding

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex III

mitochondrion organization

membrane

integral to membrane

nucleoside-triphosphatase activity

mitochondrial respiratory chain complex I assembly

mitochondrial respiratory chain complex IV assembly

mitochondrial respiratory chain complex III assembly

 
220938_s_at -0.233 6.164 -3.089 7.377e-03 0.146 -2.443 GMEB1 glucocorticoid modulatory element binding protein 1 1 28867830, 28867830 NM_006582 1p35.3 Hs.632373 18

DNA binding

transcription coactivator activity

binding

nucleus

cytoplasm

zinc ion binding

regulation of transcription

metal ion binding

 
1556325_at -0.575 8.240 -3.089 7.382e-03 0.146 -2.444 FILIP1 filamin A interacting protein 1 6 -76074519 AL832009 6q14.1 Hs.696158 9    
234851_at 0.250 4.052 3.089 7.387e-03 0.146 -2.444 IGL@ immunoglobulin lambda locus 22   AJ275399 22q11.1-q11.2 Hs.449585 Hs.561078 20    
230327_at 0.353 5.981 3.089 7.387e-03 0.146 -2.444 LOC730098 similar to chemokine (C-C motif) ligand 27 9   AI203673 9p13.3 Hs.459590      
211352_s_at -0.649 5.796 -3.089 7.387e-03 0.146 -2.444 NCOA3 nuclear receptor coactivator 3 20 45564063 U80737 20q12 Hs.592142 140

transcription coactivator activity

histone acetyltransferase activity

signal transducer activity

nucleus

cytoplasm

signal transduction

acyltransferase activity

transferase activity

androgen receptor signaling pathway

transcription regulator activity

positive regulation of transcription, DNA-dependent

thyroid hormone receptor binding

protein N-terminus binding

androgen receptor binding

 
225348_at -0.839 5.340 -3.089 7.389e-03 0.146 -2.445 FUSIP1 FUS interacting protein (serine/arginine-rich) 1 1 -24168159, -24165525, -1503240, -1500603 AI954700 1p36.11 Hs.3530 Hs.652334 22

nucleotide binding

assembly of spliceosomal tri-snRNP

RNA binding

nucleus

nucleoplasm

cytoplasm

mRNA splice site selection

mRNA splice site selection

mRNA export from nucleus

RNA splicing

cytoplasmic transport

nuclear speck

RNA splicing factor activity, transesterification mechanism

regulation of transcription

negative regulation of nuclear mRNA splicing, via spliceosome

RS domain binding

unfolded protein binding

 
224774_s_at 0.321 4.996 3.088 7.395e-03 0.146 -2.445 NAV1 neuron navigator 1 1 199884072 AK022622 1q32.3 Hs.585374 10

nucleotide binding

cytoplasm

cytoskeleton

microtubule

multicellular organismal development

nervous system development

nucleoside-triphosphatase activity

cell differentiation

 
225550_at -0.721 7.294 -3.088 7.401e-03 0.146 -2.446 C1orf71 chromosome 1 open reading frame 71 1 244796261, 244796261 AV700816 1q44 Hs.368353 9

membrane

integral to membrane

protein complex

 
1562903_at -0.441 4.554 -3.088 7.403e-03 0.146 -2.446 hCG_1990547 family with sequence similarity 86, member A pseudogene 8 8123501, 8123501, 8123501 BC035792 8p23.1 Hs.656318 2    
200916_at 0.534 7.431 3.088 7.405e-03 0.146 -2.447 TAGLN2 transgelin 2 1 -158154526 NM_003564 1q21-q25 Hs.517168 12

protein binding

plasma membrane

muscle organ development

nuclear membrane

 
223368_s_at 0.327 8.628 3.088 7.405e-03 0.146 -2.447 METTL11A methyltransferase like 11A 9 131428255 BC001396 9q34.11 Hs.522433 5

protein binding

methyltransferase activity

transferase activity

 
240172_at -0.628 5.537 -3.087 7.420e-03 0.146 -2.449 ERGIC2 ERGIC and golgi 2 12 -29384845 AA102332 12p11.22 Hs.339453 11

nucleus

cytoplasm

endoplasmic reticulum

Golgi apparatus

membrane

integral to membrane

vesicle-mediated transport

 
235489_at 0.590 5.051 3.086 7.424e-03 0.146 -2.449 RHOJ ras homolog gene family, member J 14 62740897 AI583530 14q23.2 Hs.656339 8

nucleotide binding

GTPase activity

protein binding

GTP binding

cellular_component

intracellular

plasma membrane

small GTPase mediated signal transduction

Rho protein signal transduction

regulation of cell shape

actin cytoskeleton organization

 
225516_at -0.770 9.310 -3.086 7.430e-03 0.146 -2.450 SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 8 17440664, 17445205 AA876372 8p22-p21.3 Hs.448520 10

membrane fraction

integral to plasma membrane

cellular amino acid metabolic process

transport

amino acid transport

basic amino acid transmembrane transporter activity

membrane

 
1552417_a_at -0.948 4.978 -3.085 7.437e-03 0.146 -2.451 NEDD1 neural precursor cell expressed, developmentally down-regulated 1 12 95825131, 95825374 NM_152905 12q23.1 Hs.270084 10

pericentriolar material

spindle pole

cytoplasm

centriole

microtubule basal body

cell cycle

mitosis

apical part of cell

cell division

 
206955_at 0.504 6.920 3.085 7.443e-03 0.146 -2.451 AQP7 aquaporin 7 9 -33374947 NM_001170 9p13 Hs.455323 15

transporter activity

integral to plasma membrane

generation of precursor metabolites and energy

transport

water transport

excretion

water channel activity

glycerol channel activity

glycerol transport

membrane

PPAR signaling pathway

200821_at -0.433 9.961 -3.085 7.451e-03 0.146 -2.452 LAMP2 lysosomal-associated membrane protein 2 X -119454376, -119444030 NM_013995 Xq24 Hs.496684 52

membrane fraction

lysosomal membrane

late endosome

plasma membrane

plasma membrane

integral to membrane

platelet dense granule membrane

platelet dense granule membrane

Lysosome

1555278_a_at -0.397 6.539 -3.084 7.454e-03 0.146 -2.453 CKAP5 cytoskeleton associated protein 5 11 -46721659 BC035554 11p11.2 Hs.201253 16

gamma-tubulin complex

protein binding

centrosome

cell cycle

mitosis

microtubule cytoskeleton

establishment or maintenance of microtubule cytoskeleton polarity

RNA transport

centrosome organization

spindle pole body organization

cell division

 
207773_x_at -0.349 3.682 -3.084 7.458e-03 0.146 -2.453 CYP3A43 cytochrome P450, family 3, subfamily A, polypeptide 43 7 99263571 NM_022820 7q21.1 Hs.306220 Hs.654391 Hs.695915 17

endoplasmic reticulum

microsome

electron carrier activity

membrane

heme binding

metal ion binding

oxidation reduction

aromatase activity

gamma-Hexachlorocyclohexane degradation

Linoleic acid metabolism

Retinol metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

Drug metabolism - other enzymes

Metabolic pathways

233558_s_at -0.546 5.746 -3.084 7.461e-03 0.146 -2.454 C4orf41 chromosome 4 open reading frame 41 4 184817439 AK023390 4q35.1 Hs.443240 6    
218440_at 0.355 7.233 3.084 7.466e-03 0.146 -2.454 MCCC1 methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) 3 -184215699 NM_020166 3q27 Hs.47649 13

nucleotide binding

methylcrotonoyl-CoA carboxylase activity

ATP binding

mitochondrion

mitochondrial matrix

Golgi apparatus

leucine catabolic process

biotin metabolic process

metabolic process

biotin binding

ligase activity

Valine, leucine and isoleucine degradation

Metabolic pathways

221272_s_at -0.741 7.422 -3.083 7.471e-03 0.146 -2.455 C1orf21 chromosome 1 open reading frame 21 1 182622772 NM_030806 1q25 Hs.497159 Hs.719188 8    
239623_at 0.435 5.536 3.083 7.471e-03 0.146 -2.455 FLJ44606 glutaredoxin-like protein YDR286C homolog 5   N93197 5q23.2 Hs.49573 1

transport

electron transport chain

 
239250_at 0.652 6.194 3.083 7.475e-03 0.146 -2.455 ZNF542 zinc finger protein 542 19 61571279, 61571476 BE966038 19q13.43 Hs.467326 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
239189_at 0.259 4.943 3.083 7.480e-03 0.146 -2.456 CASKIN1 CASK interacting protein 1 16 -2167184 BF090347 16p13.3 Hs.643537 3

protein binding

cytoplasm

signal transduction

 
201573_s_at -0.389 8.422 -3.082 7.484e-03 0.146 -2.456 ETF1 eukaryotic translation termination factor 1 5 -137869682 M75715 5q31.1 Hs.483494 32

RNA binding

protein binding

cytoplasm

regulation of translational termination

protein amino acid methylation

translation release factor activity, codon specific

ribosome binding

 
223380_s_at -0.498 7.621 -3.082 7.487e-03 0.146 -2.457 LATS2 LATS, large tumor suppressor, homolog 2 (Drosophila) 13 -20445175 AF207547 13q11-q12 Hs.78960 17

G1/S transition of mitotic cell cycle

nucleotide binding

magnesium ion binding

spindle pole

protein serine/threonine kinase activity

ATP binding

nucleus

cytoplasm

centrosome

protein amino acid phosphorylation

cell cycle

mitosis

protein kinase cascade

hormone-mediated signaling

transferase activity

negative regulation of cyclin-dependent protein kinase activity

cell division

 
203908_at -0.581 5.255 -3.082 7.494e-03 0.146 -2.458 SLC4A4 solute carrier family 4, sodium bicarbonate cotransporter, member 4 4 72271866, 72423633 NM_003759 4q21 Hs.5462 45

transporter activity

inorganic anion exchanger activity

plasma membrane

integral to plasma membrane

sodium ion transport

anion transport

anion transmembrane transporter activity

sodium:bicarbonate symporter activity

symporter activity

sodium ion binding

 
206853_s_at -0.294 6.486 -3.081 7.504e-03 0.146 -2.459 MAP3K7 mitogen-activated protein kinase kinase kinase 7 6 -91282073, -91282073 AL121964 6q16.1-q16.3 Hs.719192 114

nucleotide binding

magnesium ion binding

positive regulation of T cell cytokine production

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

cytosol

protein amino acid phosphorylation

signal transduction

transforming growth factor beta receptor signaling pathway

activation of NF-kappaB-inducing kinase activity

transferase activity

positive regulation of interleukin-2 production

T cell receptor signaling pathway

positive regulation of T cell activation

MAPK signaling pathway

Wnt signaling pathway

Adherens junction

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

T cell receptor signaling pathway

219279_at 0.274 3.358 3.080 7.518e-03 0.147 -2.461 DOCK10 dedicator of cytokinesis 10 2 -225338050 NM_017718 2q36.2 Hs.46578 12

guanyl-nucleotide exchange factor activity

GTP binding

GTPase binding

 
201241_at -0.429 9.959 -3.080 7.520e-03 0.147 -2.461 DDX1 DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 2 15649220 NM_004939 2p24 Hs.440599 24

nucleotide binding

spliceosome assembly

RNA binding

RNA helicase activity

protein binding

ATP binding

cellular_component

regulation of translational initiation

multicellular organismal development

ATP-dependent helicase activity

hydrolase activity

ribonucleoprotein complex

 
235415_at -0.458 5.761 -3.079 7.540e-03 0.147 -2.463 RPRD2 regulation of nuclear pre-mRNA domain containing 2 1 148603613 BE781857 1q21.3 Hs.213666 9

protein binding

 
206782_s_at 0.302 7.138 3.079 7.541e-03 0.147 -2.463 DNAJC4 DnaJ (Hsp40) homolog, subfamily C, member 4 11 63754328 NM_005528 11q13 Hs.172847 4

membrane fraction

protein folding

response to unfolded protein

membrane

integral to membrane

heat shock protein binding

unfolded protein binding

 
201588_at -0.238 10.440 -3.078 7.546e-03 0.147 -2.464 TXNL1 thioredoxin-like 1 18 -52421050 NM_004786 18q21.31 Hs.114412 15

cytoplasm

transport

disulfide oxidoreductase activity

electron transport chain

cell redox homeostasis

 
1554479_a_at -0.442 7.175 -3.078 7.549e-03 0.147 -2.464 CARD8 caspase recruitment domain family, member 8 19 -53403154 AF511652 19q13.33 Hs.446146 Hs.655940 23

protein binding

intracellular

nucleus

cytoplasm

caspase activator activity

NACHT domain binding

protein homodimerization activity

regulation of apoptosis

negative regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of caspase activity

positive regulation of interleukin-1 beta secretion

 
202335_s_at -0.366 2.872 -3.078 7.550e-03 0.147 -2.465 UBE2B ubiquitin-conjugating enzyme E2B (RAD6 homolog) 5 133734768 NM_003337 5q23-q31 Hs.615284 Hs.644421 23

nucleotide binding

protein polyubiquitination

chromatin

ubiquitin-protein ligase activity

ubiquitin-protein ligase activity

protein binding

ATP binding

nucleus

replication fork

cytoplasm

plasma membrane

postreplication repair

postreplication repair

ubiquitin-dependent protein catabolic process

ubiquitin-dependent protein catabolic process

protein monoubiquitination

response to DNA damage stimulus

spermatogenesis

sperm axoneme assembly

response to UV

ligase activity

ubiquitin protein ligase binding

histone H2A ubiquitination

response to drug

protein stabilization

regulation of protein metabolic process

protein autoubiquitination

Wnt receptor signaling pathway through beta-catenin

Ubiquitin mediated proteolysis

227834_at -0.613 9.571 -3.078 7.552e-03 0.147 -2.465 TXLNB taxilin beta 6 -139602893 AL589605 6q24.1 Hs.535820 12

cytoplasm

 
1552315_at 0.345 5.820 3.078 7.560e-03 0.147 -2.466 GIMAP1 GTPase, IMAP family member 1 7 150044630 NM_130759 7q36.1 Hs.647087 7

GTP binding

endoplasmic reticulum

membrane

integral to membrane

 
230475_at 0.409 5.722 3.078 7.560e-03 0.147 -2.466 C15orf59 chromosome 15 open reading frame 59 15 -71819193 AI368415 15q24.1 Hs.40794 1    
230221_at 0.350 5.927 3.077 7.564e-03 0.147 -2.466 BAT5 HLA-B associated transcript 5 6 -31762714, -3100861, -2902325 AI139010 6p21.3 Hs.388188 14

protein binding

cytosol

defense response

response to unfolded protein

response to nutrient

membrane

integral to membrane

protein complex

NF-kappaB binding

 
1559388_a_at -0.295 5.583 -3.077 7.575e-03 0.147 -2.467 LYNX1 Ly6/neurotoxin 1 8 -143849616, -143849616, -143849616, -143842759, -143842757 BG701653 8q24.3 Hs.158665 Hs.604828 9

extracellular region

plasma membrane

anchored to membrane

 
217348_x_at 0.292 6.547 3.076 7.580e-03 0.147 -2.468 ARHGEF15 Rho guanine nucleotide exchange factor (GEF) 15 17 8154314 AK023853 17p13.1 Hs.443109 7

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

GTPase activator activity

intracellular

regulation of Rho protein signal transduction

 
243179_at 0.660 4.889 3.076 7.587e-03 0.147 -2.469 LOC100130360 hypothetical LOC100130360 6   BG231554 6p22.3        
1552664_at -0.478 6.210 -3.076 7.591e-03 0.147 -2.469 FLCN folliculin 17 -17065209, -17056251 NM_144997 17p11.2 Hs.513975 32

protein binding

cytoplasm

Renal cell carcinoma

219854_at 0.451 5.260 3.075 7.606e-03 0.147 -2.471 ZNF14 zinc finger protein 14 19 -19682280 NM_021030 19p13.3-p13.2 Hs.659932 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1565651_at 0.264 5.516 3.074 7.609e-03 0.147 -2.472 ARF1 ADP-ribosylation factor 1 1 226336983, 226337473 BI868311 1q42 Hs.286221 97

Golgi membrane

nucleotide binding

GTPase activity

receptor signaling protein activity

protein binding

GTP binding

intracellular

Golgi apparatus

cytosol

cytosol

plasma membrane

retrograde vesicle-mediated transport, Golgi to ER

small GTPase mediated signal transduction

protein transport

membrane organization

vesicle-mediated transport

sarcomere

COPI coating of Golgi vesicle

Vibrio cholerae infection

227186_s_at 0.550 11.233 3.074 7.610e-03 0.147 -2.472 MRPL41 mitochondrial ribosomal protein L41 9 139566129 AI090841 9q34.3 Hs.44017 10

structural constituent of ribosome

mitochondrion

mitochondrial large ribosomal subunit

ribosome

translation

apoptosis

cell cycle

 
212918_at -0.382 6.481 -3.074 7.612e-03 0.147 -2.472 RECQL RecQ protein-like (DNA helicase Q1-like) 12 -21513111 AI962943 12p12 Hs.235069 29

nucleotide binding

DNA strand renaturation

DNA strand annealing activity

DNA binding

ATP-dependent DNA helicase activity

protein binding

ATP binding

nucleus

DNA repair

DNA recombination

hydrolase activity

 
223915_at 0.539 5.052 3.074 7.613e-03 0.147 -2.472 BCOR BCL6 co-repressor X -39795442, -39795442 AF317392 Xp21.2-p11.4 Hs.659681 19

transcription corepressor activity

transcription corepressor activity

ubiquitin-protein ligase activity

nucleus

heart development

transcription factor binding

chromatin modification

heat shock protein binding

PcG protein complex

odontogenesis

histone deacetylase binding

negative regulation of transcription, DNA-dependent

palate development

specification of axis polarity

 
213638_at 0.243 2.696 3.074 7.614e-03 0.147 -2.472 PHACTR1 phosphatase and actin regulator 1 6 12825818 AW054711 6p24.1 Hs.436996 8

actin binding

phosphoprotein phosphatase inhibitor activity

cytoplasm

cell junction

synapse

 
219504_s_at -0.292 5.810 -3.074 7.617e-03 0.147 -2.473 RPAP2 RNA polymerase II associated protein 2 1 92537109 NM_024813 1p22.1 Hs.444421 7

membrane

integral to membrane

 
1552785_at 0.327 2.742 3.074 7.619e-03 0.147 -2.473 ZNF781 zinc finger protein 781 19 -42850489 NM_152605 19q13.12 Hs.116622 1

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
1555799_at -0.365 3.456 -3.074 7.622e-03 0.147 -2.473 FCRL5 Fc receptor-like 5 1 -155749790 AL834187 1q21 Hs.415950 15

receptor activity

plasma membrane

integral to membrane

 
221821_s_at -0.633 7.843 -3.072 7.647e-03 0.148 -2.476 C12orf41 chromosome 12 open reading frame 41 12 -47333261 AK022732 12q13.11 Hs.505412 8    
230143_at 0.558 5.047 3.072 7.650e-03 0.148 -2.477 RNF165 ring finger protein 165 18 42168184 BF433220 18q21.1 Hs.501114 4

protein binding

zinc ion binding

metal ion binding

 
235978_at 1.140 6.208 3.072 7.651e-03 0.148 -2.477 FABP4 fatty acid binding protein 4, adipocyte 8 -82553286 AI766029 8q21 Hs.391561 44

cytokine production

transporter activity

fatty acid binding

protein binding

soluble fraction

nucleus

cytoplasm

cytosol

negative regulation of protein kinase activity

fatty acid metabolic process

transport

positive regulation of cell proliferation

negative regulation of transcription

transcription repressor activity

response to drug

cholesterol homeostasis

positive regulation of inflammatory response

white fat cell differentiation

brown fat cell differentiation

response to glucocorticoid stimulus

PPAR signaling pathway

243042_at -0.481 5.596 -3.070 7.679e-03 0.148 -2.480 FAM73A family with sequence similarity 73, member A 1 78017896 BE645144 1p31.1 Hs.632419 1

membrane

integral to membrane

 
239412_at 0.379 4.870 3.070 7.684e-03 0.148 -2.481 IRF5 interferon regulatory factor 5 7 128365229, 128365506, 128368007 BF223643 7q32 Hs.521181 63

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

Toll-like receptor signaling pathway

205607_s_at -0.356 6.109 -3.069 7.692e-03 0.148 -2.482 SCYL3 SCY1-like 3 (S. cerevisiae) 1 -168088427 NM_020423 1q24.2 Hs.435560 11

protein kinase activity

protein binding

ATP binding

cytoplasm

Golgi apparatus

protein amino acid phosphorylation

cell migration

lamellipodium

 
202811_at -0.342 8.074 -3.069 7.693e-03 0.148 -2.482 STAMBP STAM binding protein 2 73909593, 73909634, 73909654 NM_006463 2p13.1 Hs.469018 Hs.657598 28

ubiquitin thiolesterase activity

protein binding

nucleus

cytoplasm

early endosome

anti-apoptosis

JAK-STAT cascade

peptidase activity

metallopeptidase activity

zinc ion binding

positive regulation of cell proliferation

membrane

modification-dependent protein catabolic process

metal ion binding

Endocytosis

212651_at -1.435 8.536 -3.069 7.694e-03 0.148 -2.482 RHOBTB1 Rho-related BTB domain containing 1 10 -62299205, -62299205, -62299205 AB018283 10q21.2 Hs.148670 10

nucleotide binding

protein binding

GTP binding

intracellular

small GTPase mediated signal transduction

 
205222_at 1.049 4.020 3.069 7.698e-03 0.148 -2.482 EHHADH enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase 3 -186391105 NM_001966 3q26.3-q28 Hs.429879 9

3-hydroxyacyl-CoA dehydrogenase activity

dodecenoyl-CoA delta-isomerase activity

enoyl-CoA hydratase activity

binding

mitochondrion

peroxisome

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

oxidoreductase activity

lyase activity

isomerase activity

coenzyme binding

oxidation reduction

Fatty acid metabolism

Valine, leucine and isoleucine degradation

Lysine degradation

Tryptophan metabolism

beta-Alanine metabolism

Benzoate degradation via CoA ligation

Propanoate metabolism

Butanoate metabolism

Limonene and pinene degradation

Caprolactam degradation

Metabolic pathways

PPAR signaling pathway

238929_at -0.347 5.174 -3.068 7.705e-03 0.148 -2.483 SFRS2B splicing factor, arginine/serine-rich 2B 11 94439703 N30132 11q22 Hs.476680 Hs.713908 6

nucleotide binding

RNA binding

nucleus

mRNA processing

RNA splicing

 
235867_at -0.550 6.134 -3.068 7.713e-03 0.148 -2.484 GSTM3 glutathione S-transferase mu 3 (brain) 1 -110078076 AI459140 1p13.3 Hs.2006 96

glutathione transferase activity

cytoplasm

establishment of blood-nerve barrier

metabolic process

transferase activity

identical protein binding

response to estrogen stimulus

Glutathione metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

214805_at 0.347 5.588 3.067 7.718e-03 0.148 -2.485 EIF4A1 eukaryotic translation initiation factor 4A, isoform 1 17 7416780 U79273 17p13 Hs.129673 28

nucleotide binding

RNA cap binding

mRNA binding

translation initiation factor activity

helicase activity

protein binding

ATP binding

cytosol

translation

ATP-dependent helicase activity

eukaryotic translation initiation factor 4F complex

hydrolase activity

 
219233_s_at 0.231 5.366 3.067 7.720e-03 0.148 -2.485 GSDMB gasdermin B 17 -35314373, -35314373 NM_018530 17q12 Hs.306777 12

cytoplasm

 
218829_s_at -0.344 6.856 -3.067 7.724e-03 0.148 -2.485 CHD7 chromodomain helicase DNA binding protein 7 8 61753892 NM_017780 8q12.1-q12.2 Hs.20395 36

nucleotide binding

chromatin

skeletal system development

blood vessel development

in utero embryonic development

heart morphogenesis

DNA binding

chromatin binding

helicase activity

ATP binding

nucleus

chromatin assembly or disassembly

central nervous system development

adult heart development

sensory perception of sound

locomotory behavior

adult walking behavior

blood circulation

chromatin modification

hydrolase activity

cranial nerve development

T cell differentiation

female genitalia development

embryonic hindlimb morphogenesis

positive regulation of multicellular organism growth

inner ear morphogenesis

nose development

regulation of transcription

cognition

palate development

retina development in camera-type eye

regulation of growth hormone secretion

limb development

face development

 
241800_x_at 0.248 6.368 3.067 7.730e-03 0.148 -2.486 ZMYM2 zinc finger, MYM-type 2 13 19430809 AA812691 13q11-q12 Hs.644041 29

protein binding

cellular_component

nucleus

biological_process

zinc ion binding

PML body

ubiquitin conjugating enzyme binding

regulation of transcription

metal ion binding

 
224597_at -0.343 10.927 -3.066 7.736e-03 0.148 -2.487 LOC647979 hypothetical LOC647979 20 -34096955 AV729406 20q11.23 Hs.649310 Hs.718413 2    
201455_s_at -0.470 8.739 -3.066 7.743e-03 0.149 -2.488 NPEPPS aminopeptidase puromycin sensitive 17 42963442 AJ132583 17q21 Hs.443837 14

aminopeptidase activity

protein binding

nucleus

cytoplasm

cytosol

proteolysis

peptidase activity

metallopeptidase activity

zinc ion binding

metal ion binding

 
238012_at 0.433 5.615 3.066 7.747e-03 0.149 -2.488 DPP7 dipeptidyl-peptidase 7 9 -139124812 AI620209 9q34.3 Hs.37916 15

aminopeptidase activity

protein binding

lysosome

proteolysis

peptidase activity

serine-type peptidase activity

cytoplasmic vesicle

 
214755_at 0.439 3.884 3.065 7.749e-03 0.149 -2.488 UAP1L1 UDP-N-acteylglucosamine pyrophosphorylase 1-like 1 9 139091773 AK022632 9q34.3 Hs.142076 2

metabolic process

transferase activity

nucleotidyltransferase activity

 
229173_at -0.678 5.966 -3.065 7.756e-03 0.149 -2.489 KIAA1715 KIAA1715 2 -176498655 N29672 2q31 Hs.209561 7

protein binding

multicellular organismal development

membrane

integral to membrane

limb development

 
1555380_at -0.285 5.536 -3.064 7.776e-03 0.149 -2.492 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif, 4 1 -159426161 BC030812 1q21-q23 Hs.211604 56

skeletal system development

protease binding

metalloendopeptidase activity

extracellular region

proteinaceous extracellular matrix

extracellular space

proteolysis

peptidase activity

zinc ion binding

metal ion binding

 
235292_at 0.392 2.774 3.064 7.780e-03 0.149 -2.492 FLJ32255 hypothetical protein LOC643977 5   BE875232 5p12 Hs.535791 1    
209264_s_at 0.346 6.099 3.063 7.785e-03 0.149 -2.493 TSPAN4 tetraspanin 4 11 832823, 832940, 834080, 834445 AF054841 11p15.5 Hs.654836 12

protein binding

plasma membrane

integral to plasma membrane

protein complex assembly

 
221269_s_at 0.394 6.278 3.063 7.788e-03 0.149 -2.493 SH3BGRL3 SH3 domain binding glutamic acid-rich protein like 3 1 26478799 NM_031286 1p35-p34.3 Hs.109051 8

nucleus

cytoplasm

electron carrier activity

protein disulfide oxidoreductase activity

cell redox homeostasis

 
209297_at -0.543 7.756 -3.063 7.790e-03 0.149 -2.493 ITSN1 intersectin 1 (SH3 domain protein) 21 33936653, 33936653 AF114488 21q22.1-q22.2 Hs.160324 39

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

calcium ion binding

protein binding

intracellular

intracellular signaling cascade

membrane

synaptosome

lamellipodium

cell junction

regulation of Rho protein signal transduction

synapse

synaptic vesicle endocytosis

 
202536_at -0.530 7.541 -3.063 7.793e-03 0.149 -2.494 CHMP2B chromatin modifying protein 2B 3 87359102 AK002165 3p11.2 Hs.476930 36

intracellular

cytoplasm

endosome

cytosol

protein transport

membrane

protein domain specific binding

Endocytosis

202583_s_at -0.580 6.875 -3.062 7.808e-03 0.149 -2.495 RANBP9 RAN binding protein 9 6 -13729708 NM_005493 6p23 Hs.708182 37

nucleus

cytoplasm

microtubule associated complex

protein complex assembly

microtubule nucleation

Ran GTPase binding

enzyme binding

 
240310_at -0.480 5.372 -3.061 7.813e-03 0.149 -2.496 TOR1AIP1 torsin A interacting protein 1 1 178118042 AI807835 1q24.2 Hs.496459 9

nucleus

membrane

integral to membrane

 
207121_s_at -0.593 9.189 -3.061 7.824e-03 0.149 -2.497 MAPK6 mitogen-activated protein kinase 6 15 50098702 NM_002748 15q21 Hs.411847 16

nucleotide binding

protein serine/threonine kinase activity

MAP kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

cell cycle

signal transduction

transferase activity

 
226871_s_at -0.432 6.652 -3.058 7.864e-03 0.150 -2.502 ATG4D ATG4 autophagy related 4 homolog D (S. cerevisiae) 19 10515646 BF791801 19p13.2 Hs.512799 6

cysteine-type endopeptidase activity

cytoplasm

microtubule associated complex

protein targeting to vacuole

autophagy

microtubule binding

peptidase activity

protein transport

modification-dependent protein catabolic process

Regulation of autophagy

209586_s_at -0.367 7.584 -3.058 7.865e-03 0.150 -2.502 PRUNE prune homolog (Drosophila) 1 149247596 AF123539 1q21 Hs.78524 8

inorganic diphosphatase activity

protein binding

nucleus

cytoplasm

focal adhesion

hydrolase activity

cell junction

manganese ion binding

metal ion binding

Purine metabolism

1559957_a_at 0.343 2.809 3.058 7.868e-03 0.150 -2.502 LOC642852 hypothetical LOC642852 21 45532394 BG396868 21q22.3 Hs.11637 Hs.676029 Hs.710382 2    
226008_at -0.333 7.262 -3.057 7.890e-03 0.150 -2.505 NDNL2 necdin-like 2 15 -27347649 AA627644 15q13.1 Hs.719283 8

protein binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

regulation of growth

 
201595_s_at -0.371 8.667 -3.057 7.892e-03 0.150 -2.505 ZC3H15 zinc finger CCCH-type containing 15 2 187059129 NM_018471 2q32.1 Hs.368598 3

nucleic acid binding

nucleus

cytoplasm

zinc ion binding

cytokine-mediated signaling pathway

metal ion binding

 
243010_at -0.381 4.275 -3.057 7.893e-03 0.150 -2.505 MSI2 musashi homolog 2 (Drosophila) 17 52688929, 52689372 BE000929 17q22 Hs.658922 7

nucleotide binding

RNA binding

cytoplasm

 
212003_at -0.269 6.891 -3.056 7.900e-03 0.150 -2.506 C1orf144 chromosome 1 open reading frame 144 1 16566169 BG171020 1p36.13 Hs.252967 2    
229487_at 0.576 5.906 3.056 7.907e-03 0.150 -2.507 EBF1 early B-cell factor 1 5 -158055500 W73890 5q34 Hs.573143 21

DNA binding

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

transcription regulator activity

metal ion binding

 
241370_at -0.509 7.686 -3.055 7.916e-03 0.150 -2.508 LOC286052 hypothetical protein LOC286052 8   AA278233 8q24.13 Hs.100691 1    
223050_s_at -0.331 7.869 -3.055 7.923e-03 0.151 -2.509 FBXW5 F-box and WD repeat domain containing 5 9 -138954707 BC000850 9q34.3 Hs.522507 12

protein binding

modification-dependent protein catabolic process

 
222859_s_at 0.490 4.120 3.054 7.926e-03 0.151 -2.509 DAPP1 dual adaptor of phosphotyrosine and 3-phosphoinositides 4 100957003 AA150186 4q25-q27 Hs.436271 Hs.708484 15

protein tyrosine phosphatase activity

protein binding

phospholipid binding

cellular_component

cytoplasm

protein amino acid dephosphorylation

signal transduction

membrane

B cell receptor signaling pathway

223049_at -0.352 7.509 -3.054 7.935e-03 0.151 -2.510 GRB2 growth factor receptor-bound protein 2 17 -70825751, -70825751 AF246238 17q24-q25 Hs.444356 Hs.708119 438

SH3/SH2 adaptor activity

epidermal growth factor receptor binding

Golgi apparatus

cytosol

cytosol

epidermal growth factor receptor signaling pathway

Ras protein signal transduction

Ras protein signal transduction

cell-cell signaling

insulin receptor signaling pathway

insulin receptor substrate binding

interspecies interaction between organisms

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

Dorso-ventral axis formation

Focal adhesion

Gap junction

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Neurotrophin signaling pathway

Insulin signaling pathway

GnRH signaling pathway

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Endometrial cancer

Glioma

Prostate cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Non-small cell lung cancer

233986_s_at 0.371 4.238 3.053 7.944e-03 0.151 -2.511 PLEKHG2 pleckstrin homology domain containing, family G (with RhoGef domain) member 2 19 44595589 AK026111 19q13.2 Hs.631574 4

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

intracellular

regulation of Rho protein signal transduction

 
237289_at -0.310 5.206 -3.053 7.955e-03 0.151 -2.513 CREB1 cAMP responsive element binding protein 1 2 208102860 AW593801 2q34 Hs.516646 215

transcription factor activity

transcription cofactor activity

nucleus

nucleoplasm

regulation of transcription, DNA-dependent

protein amino acid phosphorylation

signal transduction

response to organic substance

sequence-specific DNA binding

interspecies interaction between organisms

positive regulation of transcription from RNA polymerase II promoter

protein dimerization activity

Antigen processing and presentation

Melanogenesis

Huntington's disease

Prostate cancer

217751_at 0.374 9.204 3.053 7.957e-03 0.151 -2.513 GSTK1 glutathione S-transferase kappa 1 7 142670643 NM_015917 7q35 Hs.390667 19

glutathione transferase activity

intracellular

peroxisome

protein disulfide oxidoreductase activity

transferase activity

outer membrane-bounded periplasmic space

identical protein binding

Glutathione metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

208788_at 0.501 6.150 3.052 7.963e-03 0.151 -2.513 ELOVL5 ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast) 6 -53240154 AL136939 6p21.1-p12.1 Hs.713560 11

endoplasmic reticulum

fatty acid biosynthetic process

membrane

integral to membrane

Biosynthesis of unsaturated fatty acids

226726_at 0.308 4.980 3.052 7.968e-03 0.151 -2.514 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 -8914151 W63676 2p25.1 Hs.467634 Hs.593538 7

1-acylglycerol-3-phosphate O-acyltransferase activity

acyltransferase activity

phospholipid biosynthetic process

membrane

integral to membrane

transferase activity

 
208981_at 0.467 7.209 3.052 7.969e-03 0.151 -2.514 PECAM1 platelet/endothelial cell adhesion molecule 17 -59753594 AA702701 17q23 Hs.514412 Hs.718947 147

protein binding

extracellular space

plasma membrane

plasma membrane

cell adhesion

signal transduction

cell recognition

integral to membrane

platelet alpha granule membrane

Cell adhesion molecules (CAMs)

Leukocyte transendothelial migration

202417_at -0.478 8.783 -3.051 7.982e-03 0.151 -2.516 KEAP1 kelch-like ECH-associated protein 1 19 -10457795, -10457795 NM_012289 19p13.2 Hs.465870 51

in utero embryonic development

protein binding

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

centrosome

transcription regulator activity

regulation of transcription

regulation of epidermal cell differentiation

Ubiquitin mediated proteolysis

204789_at 0.280 5.713 3.051 7.984e-03 0.151 -2.516 FMNL1 formin-like 1 17 40655074 NM_005892 17q21 Hs.100217 11

molecular_function

actin binding

cellular_component

cytoplasm

cellular component organization

Rho GTPase binding

actin cytoskeleton organization

 
207808_s_at 0.395 5.468 3.050 7.992e-03 0.151 -2.517 PROS1 protein S (alpha) 3 -95074571 NM_000313 3q11.2 Hs.64016 111

endopeptidase inhibitor activity

calcium ion binding

extracellular region

blood coagulation

Complement and coagulation cascades

225325_at 0.282 6.026 3.050 8.000e-03 0.151 -2.518 MFSD6 major facilitator superfamily domain containing 6 2 190981325 AA133311 2q32.2 Hs.418581 Hs.715029 5

membrane

integral to membrane

 
222136_x_at 0.455 5.307 3.050 8.003e-03 0.151 -2.518 ZNF43 zinc finger protein 43 19 -21779591 AK022905 19p13.1-p12 Hs.534365 13

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
207180_s_at -0.312 7.429 -3.049 8.012e-03 0.151 -2.519 HTATIP2 HIV-1 Tat interactive protein 2, 30kDa 11 20341806, 20341822, 20341864, 20341978, 20342262 NM_006410 11p15.1 Hs.90753 31

RNA polymerase II transcription factor activity

transcription coactivator activity

protein binding

nucleus

nuclear envelope

cytoplasm

regulation of transcription from RNA polymerase II promoter

anti-apoptosis

induction of apoptosis

multicellular organismal development

oxidoreductase activity

cell differentiation

regulation of apoptosis

interspecies interaction between organisms

regulation of angiogenesis

nuclear import

oxidation reduction

 
235163_at 0.341 6.615 3.049 8.019e-03 0.151 -2.520 MOBKL2A MOB1, Mps One Binder kinase activator-like 2A (yeast) 19 -2022034 BE311936 19p13.3 Hs.86912 9

protein binding

intracellular

zinc ion binding

metal ion binding

 
208969_at 0.489 10.334 3.048 8.031e-03 0.151 -2.521 NDUFA9 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa 12 4628543 AF050641 12p13.3 Hs.75227 14

catalytic activity

NADH dehydrogenase activity

NADH dehydrogenase activity

protein binding

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial matrix

mitochondrial electron transport, NADH to ubiquinone

transport

sodium ion transport

NADH dehydrogenase (ubiquinone) activity

electron transport chain

cellular metabolic process

coenzyme binding

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

211717_at -0.477 6.045 -3.048 8.035e-03 0.151 -2.522 ANKRD40 ankyrin repeat domain 40 17 -46125550 BC005853 17q21.33 Hs.463426 2    
232175_at 0.281 6.270 3.048 8.035e-03 0.151 -2.522 ARF1 ADP-ribosylation factor 1 1 226336983, 226337473 AI972094 1q42 Hs.286221 97

Golgi membrane

nucleotide binding

GTPase activity

receptor signaling protein activity

protein binding

GTP binding

intracellular

Golgi apparatus

cytosol

cytosol

plasma membrane

retrograde vesicle-mediated transport, Golgi to ER

small GTPase mediated signal transduction

protein transport

membrane organization

vesicle-mediated transport

sarcomere

COPI coating of Golgi vesicle

Vibrio cholerae infection

226195_at 0.367 6.195 3.048 8.039e-03 0.151 -2.522 C14orf179 chromosome 14 open reading frame 179 14 75521848 AW827281 14q24.3 Hs.532626 5    
227899_at 0.405 5.975 3.047 8.043e-03 0.151 -2.523 VIT vitrin 2 36777417 AI817458 2p22-p21 Hs.137415 7

extracellular region

proteinaceous extracellular matrix

 
34031_i_at -0.708 6.513 -3.047 8.048e-03 0.151 -2.523 KRIT1 KRIT1, ankyrin repeat containing 7 -91666218, -91666218, -91666218 U90269 7q21-q22 Hs.531987 48

small GTPase regulator activity

protein binding

cytoskeleton

small GTPase mediated signal transduction

membrane

 
214274_s_at 0.473 8.188 3.047 8.048e-03 0.151 -2.523 ACAA1 acetyl-Coenzyme A acyltransferase 1 3 -38139204 AI860341 3p23-p22 Hs.643487 17

acetyl-CoA C-acyltransferase activity

protein binding

cytoplasm

peroxisome

generation of precursor metabolites and energy

lipid metabolic process

fatty acid metabolic process

metabolic process

acyltransferase activity

transferase activity

intracellular membrane-bounded organelle

Fatty acid metabolism

Valine, leucine and isoleucine degradation

Biosynthesis of unsaturated fatty acids

Metabolic pathways

PPAR signaling pathway

218304_s_at -0.506 9.339 -3.046 8.062e-03 0.152 -2.525 OSBPL11 oxysterol binding protein-like 11 3 -126730397 NM_022776 3q21 Hs.477440 12

lipid transport

steroid metabolic process

 
1552536_at -0.265 3.354 -3.046 8.064e-03 0.152 -2.525 VTI1A vesicle transport through interaction with t-SNAREs homolog 1A (yeast) 10 114196745 NM_145206 10q25.2 Hs.194554 10

SNAP receptor activity

intracellular protein transport

protein transporter activity

membrane

vesicle-mediated transport

SNARE complex

retrograde transport, endosome to Golgi

SNARE interactions in vesicular transport

1559079_at 0.238 3.359 3.046 8.069e-03 0.152 -2.526 LOC283486 hypothetical protein LOC283486 13   BC035264 13q34 Hs.447504 1    
221559_s_at -0.488 7.202 -3.046 8.070e-03 0.152 -2.526 MIS12 MIS12, MIND kinetochore complex component, homolog (S. pombe) 17 5330970 BC000229 17p13.2 Hs.267194 11

MIS12/MIND type complex

chromosome, centromeric region

protein binding

nucleus

cell cycle

chromosome segregation

mitosis

cell division

kinetochore assembly

 
225153_at -0.294 9.852 -3.045 8.078e-03 0.152 -2.527 GFM1 G elongation factor, mitochondrial 1 3 159845010 AI814295 3q25.1-q26.2 Hs.518355 11

nucleotide binding

translation elongation factor activity

GTPase activity

GTP binding

intracellular

mitochondrion

translational elongation

 
227463_at 0.406 5.434 3.045 8.086e-03 0.152 -2.528 ACE angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 17 58908165, 58915908 AW057540 17q23.3 Hs.654434 1473

kidney development

angiotensin catabolic process in blood

regulation of systemic arterial blood pressure by renin-angiotensin

carboxypeptidase activity

extracellular region

extracellular space

membrane fraction

endosome

plasma membrane

proteolysis

drug binding

regulation of blood pressure

peptidase activity

metallopeptidase activity

metallopeptidase activity

peptidyl-dipeptidase activity

peptidyl-dipeptidase activity

zinc ion binding

external side of plasma membrane

regulation of smooth muscle cell migration

integral to membrane

regulation of vasoconstriction

chloride ion binding

bradykinin receptor binding

mononuclear cell proliferation

regulation of vasodilation

hormone catabolic process

hormone catabolic process

peptide catabolic process

metal ion binding

arachidonic acid secretion

hemopoietic stem cell differentiation

Renin-angiotensin system

Hypertrophic cardiomyopathy (HCM)

214987_at -0.271 5.482 -3.045 8.087e-03 0.152 -2.528 GAB1 GRB2-associated binding protein 1 4 144477432 AL049449 4q31.21 Hs.618456 Hs.80720 69

SH3/SH2 adaptor activity

protein binding

cytosol

epidermal growth factor receptor signaling pathway

cell proliferation

insulin receptor signaling pathway

ErbB signaling pathway

Neurotrophin signaling pathway

Renal cell carcinoma

215177_s_at 0.521 6.121 3.044 8.090e-03 0.152 -2.528 ITGA6 integrin, alpha 6 2 173000559 AV733308 2q31.1 Hs.133397 114

receptor activity

calcium ion binding

protein binding

cell-substrate junction assembly

cell adhesion

integrin-mediated signaling pathway

integrin complex

membrane

integral to membrane

Focal adhesion

ECM-receptor interaction

Cell adhesion molecules (CAMs)

Hematopoietic cell lineage

Regulation of actin cytoskeleton

Pathways in cancer

Small cell lung cancer

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

203088_at 0.389 5.925 3.044 8.094e-03 0.152 -2.528 FBLN5 fibulin 5 14 -91405507 NM_006329 14q32.1 Hs.332708 38

integrin binding

calcium ion binding

protein binding

extracellular region

proteinaceous extracellular matrix

soluble fraction

cell adhesion

cell-matrix adhesion

 
200045_at -0.378 8.182 -3.044 8.094e-03 0.152 -2.528 ABCF1 ATP-binding cassette, sub-family F (GCN20), member 1 6 30647148, 1987727, 1786022 NM_001090 6p21.33 Hs.655285 15

nucleotide binding

ATP binding

translation

inflammatory response

translation factor activity, nucleic acid binding

ATPase activity

ATPase activity, coupled to transmembrane movement of substances

 
202165_at -0.820 7.556 -3.044 8.104e-03 0.152 -2.530 PPP1R2 protein phosphatase 1, regulatory (inhibitor) subunit 2 3 -196722511 BF966540 3q29 Hs.535731 Hs.706920 22

protein serine/threonine phosphatase inhibitor activity

protein binding

carbohydrate metabolic process

glycogen metabolic process

generation of precursor metabolites and energy

regulation of signal transduction

regulation of phosphoprotein phosphatase activity

 
226627_at 0.348 5.483 3.043 8.117e-03 0.152 -2.531 SEPT8 septin 8 5 -132119595, -132119595, -132114407 AI912094 5q31 Hs.522057 17

nucleotide binding

protein binding

GTP binding

cell cycle

septin complex

 
221213_s_at -0.616 6.533 -3.041 8.143e-03 0.152 -2.534 ZNF280D zinc finger protein 280D 15 -54778849, -54709665 NM_017661 15q21.3 Hs.511477 8

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
1557950_at -0.404 6.619 -3.041 8.145e-03 0.152 -2.534 SDCCAG1 serologically defined colon cancer antigen 1 14 -49320281 BF984340 14q22 Hs.655964 8

nucleus

cytoplasm

 
221350_at 0.278 5.133 3.041 8.152e-03 0.152 -2.535 HOXC8 homeobox C8 12 52689156 NM_022658 12q13.3 Hs.664500 25

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anterior/posterior pattern formation

transcription repressor activity

neuron differentiation

sequence-specific DNA binding

skeletal system morphogenesis

 
201258_at -0.454 11.844 -3.041 8.152e-03 0.152 -2.535 RPS16 ribosomal protein S16 19 -44615686 NM_001020 19q13.1 Hs.397609 24

RNA binding

structural constituent of ribosome

protein binding

intracellular

cytosol

ribosome

rRNA processing

translational elongation

cytosolic small ribosomal subunit

cytosolic small ribosomal subunit

ribosomal small subunit biogenesis

Ribosome

204616_at 0.577 9.304 3.041 8.154e-03 0.152 -2.535 UCHL3 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) 13 75021927 NM_006002 13q22.2 Hs.162241 17

ubiquitin thiolesterase activity

intracellular

cytoplasm

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
209083_at 0.311 5.443 3.041 8.156e-03 0.152 -2.535 CORO1A coronin, actin binding protein, 1A 16 30102426 U34690 16p11.2 Hs.415067 23

immunological synapse

phagolysosome formation

phagocytic cup

nucleus

cytoplasm

plasma membrane

cell cortex

calcium ion transport

cell motion

actin filament organization

protein C-terminus binding

regulation of cell shape

lamellipodium

positive regulation of cell migration

leukocyte chemotaxis

phagocytic vesicle membrane

regulation of actin filament polymerization

cortical actin cytoskeleton

cytoplasmic vesicle

cell-substrate adhesion

filamentous actin

uropod organization

response to cytokine stimulus

positive regulation of T cell proliferation

protein homodimerization activity

T cell homeostasis

phosphoinositide 3-kinase binding

innate immune response

homeostasis of number of cells within a tissue

positive chemotaxis

actin filament binding

negative regulation of actin nucleation

 
213915_at 0.540 4.501 3.040 8.171e-03 0.152 -2.537 NKG7 natural killer cell group 7 sequence 19 -56566685 NM_005601 19q13.41 Hs.10306 4

integral to plasma membrane

membrane

 
219368_at 0.680 4.447 3.039 8.178e-03 0.152 -2.538 NAP1L2 nucleosome assembly protein 1-like 2 X -72348878 NM_021963 Xq13 Hs.66180 Hs.719281 4

nucleus

chromatin assembly complex

nucleosome assembly

 
222442_s_at -0.406 7.601 -3.039 8.178e-03 0.152 -2.538 ARL8B ADP-ribosylation factor-like 8B 3 5138929 AW055237 3p26.1 Hs.250009 Hs.719100 10

nucleotide binding

GTPase activity

GTP binding

intracellular

cytoplasm

lysosomal membrane

endosome

chromosome segregation

small GTPase mediated signal transduction

membrane

GDP binding

midbody

late endosome membrane

alpha-tubulin binding

beta-tubulin binding

spindle midzone

 
239772_x_at 0.290 6.303 3.039 8.182e-03 0.152 -2.538 DHX30 DEAH (Asp-Glu-Ala-His) box polypeptide 30 3 47819402 AI368527 3p21.31 Hs.517948 7

nucleotide binding

RNA binding

helicase activity

ATP binding

cytoplasm

mitochondrion

ATP-dependent helicase activity

hydrolase activity

mitochondrial nucleoid

 
224865_at -0.278 6.929 -3.039 8.185e-03 0.152 -2.539 FAR1 fatty acyl CoA reductase 1 11 13646781 N63551 11p15.2 Hs.501991 10

protein binding

peroxisome

lipid biosynthetic process

membrane

integral to membrane

oxidoreductase activity

oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor

oxidation reduction

 
225484_at 0.324 4.076 3.038 8.191e-03 0.152 -2.539 TSGA14 testis specific, 14 7 -129823610 AW157525 7q32 Hs.368315 6

centrosome

 
222407_s_at -0.552 10.913 -3.038 8.195e-03 0.152 -2.540 ZFP106 zinc finger protein 106 homolog (mouse) 15 -40492312 AI493587 15q15.1 Hs.511143 9

opioid peptide activity

intracellular

membrane fraction

nucleus

nucleolus

cytosol

zinc ion binding

insulin receptor signaling pathway

SH3 domain binding

metal ion binding

 
225191_at 0.375 7.279 3.038 8.198e-03 0.152 -2.540 CIRBP cold inducible RNA binding protein 19 1220266, 1220266 AL565767 19p13.3 Hs.634522 Hs.664127 17

nucleotide binding

RNA binding

protein binding

nucleus

nucleoplasm

response to cold

 
224664_at -0.275 10.834 -3.038 8.199e-03 0.152 -2.540 C10orf104 chromosome 10 open reading frame 104 10 73645811 BE962336 10q22.1 Hs.426296 5    
201733_at -0.571 3.731 -3.038 8.199e-03 0.152 -2.540 CLCN3 chloride channel 3 4 170778296 AA902971 4q33 Hs.481186 28

nucleotide binding

ion channel activity

voltage-gated chloride channel activity

protein binding

ATP binding

early endosome

early endosome

late endosome

late endosome

Golgi apparatus

Golgi apparatus

ion transport

chloride transport

regulation of pH

cell surface

vesicle membrane

vesicle membrane

antiporter activity

membrane

integral to membrane

PDZ domain binding

PDZ domain binding

chloride ion binding

cytoplasmic vesicle

protein homodimerization activity

protein heterodimerization activity

protein heterodimerization activity

endosomal lumen acidification

 
202661_at 0.276 3.582 3.038 8.200e-03 0.152 -2.540 ITPR2 inositol 1,4,5-triphosphate receptor, type 2 12 -26379551 AI963873 12p11 Hs.512235 22

response to hypoxia

plasma membrane enriched fraction

ion channel activity

inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity

calcium channel activity

calcium ion binding

cytoplasm

microsome

cell cortex

ion transport

calcium ion transport

signal transduction

calcium ion transmembrane transporter activity

membrane

integral to membrane

sarcoplasmic reticulum membrane

phosphoinositide binding

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Gap junction

Long-term potentiation

Long-term depression

GnRH signaling pathway

Alzheimer's disease

227551_at -0.498 7.428 -3.038 8.202e-03 0.152 -2.541 FAM108B1 family with sequence similarity 108, member B1 9 -73669887, -73667187 BE856596 9q21.13 Hs.380389 4

extracellular region

hydrolase activity

 
1555759_a_at 0.328 5.788 3.038 8.206e-03 0.152 -2.541 CCL5 chemokine (C-C motif) ligand 5 17 -31222608 AF043341 17q11.2-q12 Hs.514821 312

signal transducer activity

extracellular region

extracellular space

cytoplasm

cellular calcium ion homeostasis

exocytosis

cell motion

chemotaxis

inflammatory response

immune response

cellular defense response

response to oxidative stress

cell adhesion

signal transduction

cell-cell signaling

chemokine activity

response to virus

response to tumor necrosis factor

chemoattractant activity

negative regulation of viral genome replication

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

Toll-like receptor signaling pathway

Prion diseases

Epithelial cell signaling in Helicobacter pylori infection

202381_at -0.388 7.704 -3.037 8.210e-03 0.152 -2.542 ADAM9 ADAM metallopeptidase domain 9 (meltrin gamma) 8 38973661, 38973661 NM_003816 8p11.22 Hs.591852 36

activation of MAPKK activity

metalloendopeptidase activity

protein kinase C binding

integrin binding

integrin binding

integrin binding

collagen binding

extracellular region

extracellular space

cytoplasm

plasma membrane

proteolysis

response to oxidative stress

cell-matrix adhesion

transforming growth factor beta receptor signaling pathway

integrin-mediated signaling pathway

peptidase activity

zinc ion binding

cell surface

response to manganese ion

integral to membrane

SH3 domain binding

SH3 domain binding

keratinocyte differentiation

intrinsic to external side of plasma membrane

positive regulation of cell adhesion mediated by integrin

cell-cell adhesion mediated by integrin

positive regulation of macrophage fusion

response to tumor necrosis factor

monocyte activation

response to hydrogen peroxide

laminin binding

metal ion binding

positive regulation of protein secretion

positive regulation of membrane protein ectodomain proteolysis

PMA-inducible membrane protein ectodomain proteolysis

response to glucocorticoid stimulus

positive regulation of keratinocyte migration

response to calcium ion

 
209187_at -0.417 8.295 -3.037 8.211e-03 0.152 -2.542 DR1 down-regulator of transcription 1, TBP-binding (negative cofactor 2) 1 93584065 AW516932 1p22.1 Hs.348418 23

negative regulation of transcription from RNA polymerase II promoter

transcription corepressor activity

intracellular

nucleus

transcription factor binding

sequence-specific DNA binding

regulation of transcription

 
219821_s_at -0.386 7.453 -3.037 8.220e-03 0.152 -2.543 GFOD1 glucose-fructose oxidoreductase domain containing 1 6 -13471797 NM_018988 6pter-p22.1 Hs.484686 5

binding

extracellular region

electron carrier activity

oxidoreductase activity

oxidation reduction

 
201941_at 0.321 6.954 3.037 8.221e-03 0.152 -2.543 CPD carboxypeptidase D 17 25730109 BE349147 17q11.2 Hs.446079 16

metallocarboxypeptidase activity

serine-type carboxypeptidase activity

membrane fraction

nucleus

proteolysis

peptidase activity

metallopeptidase activity

zinc ion binding

membrane

integral to membrane

metal ion binding

 
201151_s_at -0.860 7.994 -3.036 8.225e-03 0.152 -2.543 MBNL1 muscleblind-like (Drosophila) 3 153468518, 153499883 BF512200 3q25 Hs.478000 Hs.558914 21

in utero embryonic development

double-stranded RNA binding

nucleus

cytoplasm

nervous system development

muscle organ development

zinc ion binding

embryonic limb morphogenesis

myoblast differentiation

metal ion binding

 
220637_at 0.307 3.950 3.036 8.229e-03 0.152 -2.544 FAM124B family with sequence similarity 124B 2 -224951658 NM_024785 2q36.2 Hs.147585 3

protein binding

 
216082_at 0.304 4.629 3.036 8.234e-03 0.152 -2.544 NEU3 sialidase 3 (membrane sialidase) 11 74377597 AK022450 11q13.5 Hs.191074 25

exo-alpha-sialidase activity

plasma membrane

integral to plasma membrane

carbohydrate metabolic process

ganglioside catabolic process

metabolic process

hydrolase activity, acting on glycosyl bonds

Other glycan degradation

Sphingolipid metabolism

241869_at 0.321 4.724 3.035 8.247e-03 0.153 -2.546 APOL6 apolipoprotein L, 6 22 34374369 AW026509 22q12.3 Hs.257352 12

lipid transporter activity

extracellular region

cytoplasm

lipid transport

lipid binding

lipoprotein metabolic process

 
1556300_s_at -1.421 6.008 -3.035 8.255e-03 0.153 -2.546 SIM1 single-minded homolog 1 (Drosophila) 6 -100943470 BF476109 6q16.3-q21 Hs.520293 17

transcription factor activity

signal transducer activity

protein binding

nucleus

Golgi apparatus

regulation of transcription, DNA-dependent

signal transduction

multicellular organismal development

nervous system development

cell differentiation

protein heterodimerization activity

 
228029_at -0.351 5.875 -3.034 8.259e-03 0.153 -2.547 ZNF721 zinc finger protein 721 4 -423778 AW513477 4p16.3 Hs.428360 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
218401_s_at -0.561 6.409 -3.034 8.269e-03 0.153 -2.548 ZNF281 zinc finger protein 281 1 -198642042 NM_012482 1q32.1 Hs.59757 5

negative regulation of transcription from RNA polymerase II promoter

DNA binding

specific RNA polymerase II transcription factor activity

intracellular

nucleus

DNA-directed RNA polymerase II, core complex

zinc ion binding

regulation of transcription

metal ion binding

 
210164_at 0.410 4.117 3.033 8.276e-03 0.153 -2.549 GZMB granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1) 14 -24170003 J03189 14q11.2 Hs.1051 142

immunological synapse

serine-type endopeptidase activity

protein binding

nucleus

cytoplasm

cytosol

proteolysis

apoptosis

cleavage of lamin

peptidase activity

cytolysis

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

201440_at -0.319 6.812 -3.033 8.278e-03 0.153 -2.549 DDX23 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 12 -47509805 NM_004818 12q13.12 Hs.130098 13

nucleotide binding

cis assembly of pre-catalytic spliceosome

nuclear mRNA splicing, via spliceosome

nucleic acid binding

ATP-dependent RNA helicase activity

helicase activity

protein binding

ATP binding

nucleus

spliceosomal complex

U5 snRNP

RNA splicing

hydrolase activity

RNA splicing factor activity, transesterification mechanism

 
208405_s_at -0.400 8.931 -3.033 8.281e-03 0.153 -2.549 CD164 CD164 molecule, sialomucin 6 -109794411 NM_006016 6q21 Hs.520313 Hs.644693 17

extracellular region

plasma membrane

integral to plasma membrane

immune response

cell adhesion

heterophilic cell adhesion

signal transduction

multicellular organismal development

negative regulation of cell proliferation

Lysosome

210033_s_at 0.327 3.035 3.033 8.285e-03 0.153 -2.550 SPAG6 sperm associated antigen 6 10 22674404 AF079363 10p12.2 Hs.655170 14

binding

cytoplasm

microtubule

cilium

axoneme

spermatid development

flagellum

cell projection organization

 
225875_s_at 0.567 5.897 3.033 8.286e-03 0.153 -2.550 NIPAL3 NIPA-like domain containing 3 1 24614831 T84558 1p36.12-p35.1 Hs.523442 6

membrane

integral to membrane

 
220392_at 0.369 4.711 3.033 8.290e-03 0.153 -2.550 EBF2 early B-cell factor 2 8 -25757489 NM_022659 8p21.2 Hs.710674 8

DNA binding

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

transcription regulator activity

positive regulation of transcription

metal ion binding

 
1554661_s_at -0.386 4.772 -3.032 8.293e-03 0.153 -2.551 C1orf71 chromosome 1 open reading frame 71 1 244796261, 244796261 BC036200 1q44 Hs.368353 9

membrane

integral to membrane

protein complex

 
217148_x_at 0.569 5.646 3.032 8.294e-03 0.153 -2.551 IGL@ immunoglobulin lambda locus 22   AJ249377 22q11.1-q11.2 Hs.449585 Hs.561078 20    
204118_at 0.389 4.535 3.031 8.310e-03 0.153 -2.553 CD48 CD48 molecule 1 -158915159 NM_001778 1q21.3-q22 Hs.243564 35

protein binding

plasma membrane

integral to plasma membrane

defense response

anchored to membrane

membrane raft

Natural killer cell mediated cytotoxicity

219402_s_at -0.558 7.489 -3.031 8.312e-03 0.153 -2.553 DERL1 Der1-like domain family, member 1 8 -124094748 NM_024295 8q24.13 Hs.241576 28

receptor activity

protein binding

endoplasmic reticulum

endoplasmic reticulum

response to unfolded protein

protein transport

membrane

integral to membrane

intracellular transport of viral proteins in host cell

integral to endoplasmic reticulum membrane

ER-associated protein catabolic process

endoplasmic reticulum unfolded protein response

retrograde protein transport, ER to cytosol

MHC class I protein binding

interspecies interaction between organisms

Amyotrophic lateral sclerosis (ALS)

228339_at 0.385 7.373 3.031 8.316e-03 0.153 -2.553 ECSCR endothelial cell-specific chemotaxis regulator 5 -138812143 AA181256 5q31.2 Hs.483538 Hs.570903 5

angiogenesis

plasma membrane

chemotaxis

multicellular organismal development

integral to membrane

cell differentiation

 
238320_at -0.333 5.661 -3.031 8.320e-03 0.153 -2.554 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 11 64946844, 64946844 AV659198 11q13.1 Hs.523789 Hs.648467 6    
1558281_a_at 0.356 4.278 3.031 8.321e-03 0.153 -2.554 TMEM184A transmembrane protein 184A 7 -1548396 BQ277407 7p22.3 Hs.592174 Hs.707784 5

membrane

integral to membrane

 
1552889_a_at 0.320 7.034 3.031 8.324e-03 0.153 -2.554 EXOC3L2 exocyst complex component 3-like 2 19 -50407718 NM_138568 19q13.32 Hs.337557 5    
201529_s_at -0.460 7.072 -3.030 8.337e-03 0.153 -2.556 RPA1 replication protein A1, 70kDa 17 1680022 NM_002945 17p13.3 Hs.461925 Hs.595562 106

nucleotide-excision repair, DNA damage removal

double-strand break repair via homologous recombination

condensed nuclear chromosome

male germ cell nucleus

in utero embryonic development

DNA binding

chromatin binding

single-stranded DNA binding

protein binding

nucleus

nucleoplasm

DNA replication factor A complex

cytoplasm

cytoskeleton

DNA-dependent DNA replication

DNA repair

nucleotide-excision repair, DNA gap filling

DNA recombination

meiosis

zinc ion binding

positive regulation of cell proliferation

PML body

hemopoiesis

metal ion binding

homeostasis of number of cells within a tissue

chromosome organization

DNA replication

Nucleotide excision repair

Mismatch repair

Homologous recombination

1553186_x_at -0.518 8.728 -3.030 8.338e-03 0.153 -2.556 RASEF RAS and EF-hand domain containing 9 -84787136 NM_152573 9q21.32 Hs.657750 3

nucleotide binding

calcium ion binding

GTP binding

cytoplasm

small GTPase mediated signal transduction

protein transport

perinuclear region of cytoplasm

 
212505_s_at -0.341 7.764 -3.030 8.339e-03 0.153 -2.556 KIAA0892 KIAA0892 19 19292629 AL110250 19p13.11 Hs.654939 Hs.713004 8

chromatin

protein binding

extracellular region

nucleus

nucleoplasm

cohesin loading complex

maintenance of mitotic sister chromatid cohesion

 
243452_at 0.424 3.711 3.030 8.341e-03 0.153 -2.556 LOC646778 hypothetical LOC646778 18   BE895304 18q12.1 Hs.631680 1    
225315_at 0.385 8.929 3.029 8.345e-03 0.153 -2.556 MRPL21 mitochondrial ribosomal protein L21 11 -68415321 BF344406 11q13.3 Hs.503047 6

RNA binding

structural constituent of ribosome

intracellular

mitochondrion

ribosome

translation

 
1554637_a_at 0.257 5.437 3.028 8.370e-03 0.153 -2.559 CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 20 31541588, 31613831 BC015066 20q11 Hs.153934 19

transcription factor activity

transcription corepressor activity

protein binding

nucleus

zinc ion binding

epithelial cell differentiation

negative regulation of transcription, DNA-dependent

metal ion binding

 
223092_at -0.486 10.131 -3.027 8.377e-03 0.154 -2.560 ANKH ankylosis, progressive homolog (mouse) 5 -14757908 AA854943 5p15.1 Hs.156727 36

skeletal system development

inorganic phosphate transmembrane transporter activity

integral to plasma membrane

transport

phosphate transport

locomotory behavior

outer membrane

outer membrane

regulation of bone mineralization

regulation of bone mineralization

inorganic diphosphate transmembrane transporter activity

 
203077_s_at -0.512 6.729 -3.027 8.387e-03 0.154 -2.561 SMAD2 SMAD family member 2 18 -43613464, -43613463, -43613463 NM_005901 18q21.1 Hs.12253 Hs.705764 206

mesoderm formation

double-stranded DNA binding

transcription factor activity

intracellular

nucleus

nucleoplasm

cytoplasm

cytosol

SMAD protein complex assembly

intracellular signaling cascade

zygotic determination of dorsal/ventral axis

gastrulation

transcription factor binding

anterior/posterior pattern formation

positive regulation of epithelial to mesenchymal transition

promoter binding

transcription activator activity

regulation of transforming growth factor beta receptor signaling pathway

transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity

primary microRNA processing

ubiquitin protein ligase binding

activin responsive factor complex

type I transforming growth factor beta receptor binding

positive regulation of gene-specific transcription

cell fate commitment

negative regulation of transcription, DNA-dependent

positive regulation of transcription from RNA polymerase II promoter

paraxial mesoderm morphogenesis

regulation of binding

palate development

co-SMAD binding

R-SMAD binding

response to cholesterol

Cell cycle

Wnt signaling pathway

TGF-beta signaling pathway

Adherens junction

Pathways in cancer

Colorectal cancer

Pancreatic cancer

201518_at -0.387 8.556 -3.026 8.396e-03 0.154 -2.562 CBX1 chromobox homolog 1 (HP1 beta homolog Drosophila ) 17 -43502412, -43502412 NM_006807 17q21.32 Hs.77254 44

chromosome, centromeric region

chromatin

chromatin binding

nucleus

nucleoplasm

nuclear heterochromatin

spindle

chromatin assembly or disassembly

enzyme binding

 
202233_s_at 0.312 11.913 3.026 8.399e-03 0.154 -2.562 UQCRH ubiquinol-cytochrome c reductase hinge protein 1 46541966 NM_006004 1p34.1 Hs.481571 9

mitochondrion

mitochondrial respiratory chain

oxidative phosphorylation

mitochondrial electron transport, ubiquinol to cytochrome c

transport

ubiquinol-cytochrome-c reductase activity

aerobic respiration

membrane

electron transport chain

Oxidative phosphorylation

Metabolic pathways

Cardiac muscle contraction

Alzheimer's disease

Parkinson's disease

Huntington's disease

1559746_a_at 0.338 4.826 3.026 8.402e-03 0.154 -2.563 ZNF718 zinc finger protein 718 4 43276 AK096662 4p16.3 Hs.428579 Hs.636638 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
226430_at 0.565 8.163 3.026 8.407e-03 0.154 -2.563 RELL1 RELT-like 1 4 -37288650, -37268816 AI394438 4p14 Hs.283378 Hs.708605 4

plasma membrane

integral to membrane

 
209712_at -0.475 6.465 -3.026 8.409e-03 0.154 -2.564 SLC35D1 solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1 1 -67237603 AI769637 1p32-p31 Hs.213642 8

UDP-N-acetylgalactosamine transmembrane transporter activity

endoplasmic reticulum

carbohydrate transport

UDP-N-acetylgalactosamine transport

membrane

integral to membrane

integral to endoplasmic reticulum membrane

chondroitin sulfate biosynthetic process

 
208454_s_at 0.256 6.233 3.025 8.421e-03 0.154 -2.565 PGCP plasma glutamate carboxypeptidase 8 97726674 NM_016134 8q22.2 Hs.156178 4

metallocarboxypeptidase activity

extracellular region

extracellular space

cytoplasm

proteolysis

peptide metabolic process

peptidase activity

metallopeptidase activity

zinc ion binding

metal ion binding

 
229073_at 0.351 3.389 3.025 8.423e-03 0.154 -2.565 PRTG protogenin homolog (Gallus gallus) 15 -53691041 AA912476 15q21.3 Hs.130957 4

multicellular organismal development

membrane

integral to membrane

 
204134_at 0.447 6.596 3.025 8.425e-03 0.154 -2.565 PDE2A phosphodiesterase 2A, cGMP-stimulated 11 -71964833, -71964833, -71964833, -71964833 NM_002599 11q13.4 Hs.503163 11

cGMP-stimulated cyclic-nucleotide phosphodiesterase activity

protein binding

signal transduction

membrane

hydrolase activity

Purine metabolism

219523_s_at 0.289 4.537 3.024 8.428e-03 0.154 -2.566 ODZ3 odz, odd Oz/ten-m homolog 3 (Drosophila) 4 183482130 NM_018104 4q35.1 Hs.130438 7

signal transduction

membrane

integral to membrane

 
208653_s_at -0.533 4.221 -3.024 8.429e-03 0.154 -2.566 CD164 CD164 molecule, sialomucin 6 -109794411 AF263279 6q21 Hs.520313 Hs.644693 17

extracellular region

plasma membrane

integral to plasma membrane

immune response

cell adhesion

heterophilic cell adhesion

signal transduction

multicellular organismal development

negative regulation of cell proliferation

Lysosome

205551_at 0.490 5.273 3.024 8.438e-03 0.154 -2.567 SV2B synaptic vesicle glycoprotein 2B 15 89570106 NM_014848 15q26.1 Hs.21754 12

acrosomal vesicle

transporter activity

protein binding

neurotransmitter transport

synaptic vesicle

membrane

integral to membrane

cell junction

cytoplasmic vesicle

synapse

regulation of protein metabolic process

ECM-receptor interaction

231913_s_at -0.377 5.710 -3.024 8.442e-03 0.154 -2.567 BRCC3 BRCA1/BRCA2-containing complex, subunit 3 X 153952903 X64643 Xq28 Hs.558537 19

nuclear ubiquitin ligase complex

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

protein binding

nucleus

double-strand break repair

response to DNA damage stimulus

peptidase activity

metallopeptidase activity

zinc ion binding

response to X-ray

chromatin modification

modification-dependent protein catabolic process

enzyme regulator activity

G2/M transition DNA damage checkpoint

polyubiquitin binding

positive regulation of DNA repair

metal ion binding

BRCA1-A complex

histone H2A K63-linked deubiquitination

histone H2A K63-linked deubiquitination

BRISC complex

 
214118_x_at -0.281 8.593 -3.023 8.453e-03 0.154 -2.568 PCM1 pericentriolar material 1 8 17824645 AI205598 8p22-p21.3 Hs.491148 36

pericentriolar material

protein binding

cytoplasm

cytoskeleton

nonmotile primary cilium

centriolar satellite

cilium assembly

cilium assembly

centrosome organization

 
209316_s_at -0.433 8.606 -3.023 8.460e-03 0.154 -2.569 HBS1L HBS1-like (S. cerevisiae) 6 -135398687, -135323215, -135323213 BC001465 6q23-q24 Hs.378532 12

nucleotide binding

translation elongation factor activity

GTPase activity

GTP binding

translation

signal transduction

 
202521_at -0.517 7.560 -3.023 8.460e-03 0.154 -2.569 CTCF CCCTC-binding factor (zinc finger protein) 16 66153964 NM_006565 16q21-q22.3 Hs.368367 79

chromosome, centromeric region

condensed chromosome

transcription factor activity

transcription corepressor activity

protein binding

intracellular

nucleus

nucleoplasm

nucleolus

DNA methylation

genetic imprinting

zinc ion binding

maintenance of DNA methylation

positive regulation of gene expression

promoter binding

transcription activator activity

nucleosome positioning

regulation of molecular function, epigenetic

chromatin insulator sequence binding

negative regulation of transcription, DNA-dependent

positive regulation of transcription, DNA-dependent

metal ion binding

regulation of centromeric sister chromatid cohesion

 
212311_at 0.364 4.444 3.022 8.463e-03 0.154 -2.569 KIAA0746 KIAA0746 protein 4 -25358146 AA522514 4p15.2 Hs.479384 5

binding

membrane

integral to membrane

 
225849_s_at -0.286 7.591 -3.022 8.472e-03 0.154 -2.570 SFT2D1 SFT2 domain containing 1 6 -166653505 BF975327 6q27 Hs.487143 3

protein transport

membrane

integral to membrane

 
206710_s_at 0.973 4.228 3.022 8.480e-03 0.154 -2.571 EPB41L3 erythrocyte membrane protein band 4.1-like 3 18 -5382387 NM_012307 18p11.32 Hs.213394 39

actin binding

structural molecule activity

cytoplasm

cytoskeleton

plasma membrane

cell-cell junction

biological_process

extrinsic to membrane

cortical actin cytoskeleton organization

Tight junction

222426_at -0.236 6.176 -3.021 8.481e-03 0.154 -2.571 MAPKAP1 mitogen-activated protein kinase associated protein 1 9 -127323569, -127239493 BG499947 9q33.3 Hs.495138 19

cellular_component

nucleus

cytosol

plasma membrane

biological_process

Ras GTPase binding

cytoplasmic vesicle

 
226106_at -0.445 8.884 -3.021 8.485e-03 0.154 -2.572 RNF141 ring finger protein 141 11 -10489800 AI307808 11p15.4 Hs.44685 7

DNA binding

protein binding

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
212235_at 0.323 6.490 3.021 8.494e-03 0.154 -2.573 PLXND1 plexin D1 3 -130756745 AL575403 3q22.1 Hs.301685 10

receptor activity

intracellular

plasma membrane

signal transduction

multicellular organismal development

integral to membrane

 
210847_x_at 0.352 3.575 3.021 8.495e-03 0.154 -2.573 TNFRSF25 tumor necrosis factor receptor superfamily, member 25 1 -6446757, -6443800 AF026071 1p36.2 Hs.462529 30

receptor activity

tumor necrosis factor receptor activity

protein binding

extracellular region

cytosol

plasma membrane

integral to plasma membrane

cell surface receptor linked signal transduction

induction of apoptosis by extracellular signals

regulation of apoptosis

Cytokine-cytokine receptor interaction

215546_at 0.359 4.404 3.020 8.501e-03 0.154 -2.573 PSMD5 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 9 -122618152 AK001065 9q33.2 Hs.193725 39

proteasome complex

binding

cytosol

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

 
221486_at -0.490 9.846 -3.020 8.504e-03 0.154 -2.574 ENSA endosulfine alpha 1 -148866145, -148862377, -148862377, -148861222, -148861222 AF067170 1q21.3 Hs.632456 15

receptor binding

cytoplasm

transport

response to nutrient

ion channel inhibitor activity

 
201828_x_at 0.446 9.276 3.020 8.508e-03 0.154 -2.574 FAM127A family with sequence similarity 127, member A X 133993998 NM_003928 Xq26 Hs.522789 9    
200990_at -0.278 7.023 -3.020 8.512e-03 0.154 -2.575 TRIM28 tripartite motif-containing 28 19 63747647 NM_005762 19q13.4 Hs.467408 54

epithelial to mesenchymal transition

transcription factor activity

transcription corepressor activity

protein binding

intracellular

nucleus

regulation of transcription from RNA polymerase II promoter

zinc ion binding

positive regulation of gene-specific transcription

sequence-specific DNA binding

regulation of transcription

metal ion binding

 
235958_at 0.297 6.224 3.019 8.519e-03 0.154 -2.575 PLA2G4F phospholipase A2, group IVF 15 -40220688 AW299828 15q15.1 Hs.231873 6

phospholipase A2 activity

calcium ion binding

cytoplasm

lysosome

cytosol

metabolic process

phospholipid catabolic process

membrane

lipid catabolic process

hydrolase activity

Fc gamma R-mediated phagocytosis

242271_at 1.945 6.742 3.019 8.519e-03 0.154 -2.575 SLC26A9 solute carrier family 26, member 9 1 -204148801, -204148801 AI932662 1q31-q32 Hs.164073 8

transporter activity

transport

chloride transport

regulation of pH

secondary active sulfate transmembrane transporter activity

sulfate transport

bicarbonate transmembrane transporter activity

anion:anion antiporter activity

bicarbonate transport

membrane

integral to membrane

apical plasma membrane

 
229331_at 0.348 2.702 3.019 8.525e-03 0.154 -2.576 SPATA18 spermatogenesis associated 18 homolog (rat) 4 52612349 AI559300 4q12 Hs.527090 4

cytoplasm

multicellular organismal development

spermatogenesis

cell differentiation

 
215501_s_at -0.673 6.548 -3.019 8.527e-03 0.154 -2.576 DUSP10 dual specificity phosphatase 10 1 -219941388, -219941388 AK022513 1q41 Hs.497822 15

protein tyrosine phosphatase activity

nucleus

cytoplasm

protein amino acid dephosphorylation

response to stress

JNK cascade

hydrolase activity

MAP kinase tyrosine/serine/threonine phosphatase activity

MAPK signaling pathway

203203_s_at -0.420 6.792 -3.019 8.527e-03 0.154 -2.576 KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) 12 -74177685 NM_007043 12q21.2 Hs.645517 16

RNA binding

nucleus

nucleolus

small nucleolar ribonucleoprotein complex

rRNA processing

 
201792_at 0.241 5.774 3.018 8.533e-03 0.154 -2.577 AEBP1 AE binding protein 1 7 44110484 NM_001129 7p13 Hs.439463 9

skeletal system development

transcription factor activity

metallocarboxypeptidase activity

extracellular region

nucleus

cytoplasm

proteolysis

cell adhesion

muscle organ development

zinc ion binding

regulation of transcription

 
210346_s_at -0.574 7.606 -3.017 8.557e-03 0.155 -2.579 CLK4 CDC-like kinase 4 5 -177962270 AF212224 5q35 Hs.406557 7

nucleotide binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

ATP binding

nucleus

transferase activity

peptidyl-tyrosine phosphorylation

protein amino acid autophosphorylation

 
202587_s_at -0.603 10.851 -3.016 8.583e-03 0.155 -2.582 AK1 adenylate kinase 1 9 -129668579 BC001116 9q34.1 Hs.175473 24

nucleotide binding

adenylate kinase activity

protein binding

ATP binding

nucleus

cytoplasm

mitochondrion

cytosol

plasma membrane

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

cell cycle arrest

transferase activity

nucleoside kinase activity

ATP metabolic process

Purine metabolism

Metabolic pathways

201735_s_at -0.519 6.971 -3.015 8.588e-03 0.155 -2.583 CLCN3 chloride channel 3 4 170778296 NM_001829 4q33 Hs.481186 28

nucleotide binding

ion channel activity

voltage-gated chloride channel activity

protein binding

ATP binding

early endosome

early endosome

late endosome

late endosome

Golgi apparatus

Golgi apparatus

ion transport

chloride transport

regulation of pH

cell surface

vesicle membrane

vesicle membrane

antiporter activity

membrane

integral to membrane

PDZ domain binding

PDZ domain binding

chloride ion binding

cytoplasmic vesicle

protein homodimerization activity

protein heterodimerization activity

protein heterodimerization activity

endosomal lumen acidification

 
235408_x_at 0.576 3.536 3.015 8.594e-03 0.155 -2.583 ZNF117 zinc finger protein 117 7 -64072264 AW058673 7q11.21 Hs.250693 5

molecular_function

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

biological_process

zinc ion binding

metal ion binding

 
217867_x_at 0.275 6.060 3.015 8.597e-03 0.155 -2.584 BACE2 beta-site APP-cleaving enzyme 2 21 41461597 NM_012105 21q22.3 Hs.529408 42

aspartic-type endopeptidase activity

membrane fraction

protein modification process

proteolysis

membrane protein ectodomain proteolysis

peptidase activity

protein secretion

membrane

integral to membrane

peptide hormone processing

negative regulation of amyloid precursor protein biosynthetic process

Alzheimer's disease

203854_at 0.437 4.755 3.015 8.601e-03 0.155 -2.584 CFI complement factor I 4 -110881296 NM_000204 4q25 Hs.312485 44

serine-type endopeptidase activity

scavenger receptor activity

extracellular region

extracellular space

proteolysis

complement activation, classical pathway

peptidase activity

membrane

innate immune response

Complement and coagulation cascades

222058_at 0.227 4.403 3.014 8.612e-03 0.155 -2.585 RNF130 ring finger protein 130 5 -179315079 AW194818 5q35.3 Hs.484363 7

molecular_function

protein binding

apoptosis

zinc ion binding

membrane

integral to membrane

metal ion binding

 
208812_x_at 0.574 10.189 3.013 8.629e-03 0.156 -2.587 HLA-C major histocompatibility complex, class I, C 6 -31344507, -2686290, -2483726 BC004489 6p21.3 Hs.654404 Hs.656020 Hs.77961 521

antigen processing and presentation of peptide antigen via MHC class I

extracellular region

plasma membrane

integral to plasma membrane

immune response

immune response

membrane

integral to membrane

antigen processing and presentation

MHC class I receptor activity

MHC class I protein complex

interspecies interaction between organisms

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

207164_s_at -0.456 3.944 -3.013 8.634e-03 0.156 -2.588 ZNF238 zinc finger protein 238 1 242281183, 242283204 NM_006352 1q44-qter Hs.69997 11

negative regulation of transcription from RNA polymerase II promoter

nuclear chromosome

transcription factor activity

protein binding

intracellular

nucleus

transport

zinc ion binding

regulation of transcription

metal ion binding

 
215543_s_at -0.537 7.717 -3.012 8.645e-03 0.156 -2.589 LARGE like-glycosyltransferase 22 -31999061 AB011181 22q12.3 Hs.474667 18

Golgi apparatus

N-acetylglucosamine metabolic process

protein amino acid glycosylation

glycosphingolipid biosynthetic process

acetylglucosaminyltransferase activity

membrane

integral to membrane

transferase activity, transferring glycosyl groups

integral to Golgi membrane

muscle maintenance

 
203338_at -0.634 8.562 -3.012 8.648e-03 0.156 -2.589 PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform 14 -62911107 NM_006246 14q23.1 Hs.334868 20

protein phosphatase type 2A complex

protein binding

cytoplasm

signal transduction

protein phosphatase type 2A regulator activity

intracellular membrane-bounded organelle

Wnt signaling pathway

233813_at 0.513 4.567 3.012 8.648e-03 0.156 -2.589 PPP1R16B protein phosphatase 1, regulatory (inhibitor) subunit 16B 20 36867761 AK026900 20q11.23 Hs.45719 7

plasma membrane

signal transduction

protein phosphatase binding

 
231866_at -0.486 7.479 -3.012 8.651e-03 0.156 -2.589 LNPEP leucyl/cystinyl aminopeptidase 5 96297101, 96319911 AA767440 5q15 Hs.527199 Hs.656905 44

aminopeptidase activity

extracellular region

intracellular

plasma membrane

integral to plasma membrane

proteolysis

cell-cell signaling

female pregnancy

peptidase activity

metallopeptidase activity

zinc ion binding

metal ion binding

Renin-angiotensin system

224636_at -0.421 8.964 -3.012 8.653e-03 0.156 -2.590 ZFP91 zinc finger protein 91 homolog (mouse) 11 58103162 AL045405 11q12 Hs.524920 10

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
221503_s_at -0.770 9.038 -3.011 8.656e-03 0.156 -2.590 KPNA3 karyopherin alpha 3 (importin alpha 4) 13 -49171444 AF034756 13q14.3 Hs.527919 61

protein binding

nucleus

nuclear pore

cytoplasm

protein complex assembly

NLS-bearing substrate import into nucleus

intracellular protein transport

nuclear localization sequence binding

protein transporter activity

 
207614_s_at -0.409 7.395 -3.011 8.656e-03 0.156 -2.590 CUL1 cullin 1 7 148026865 NM_003592 7q36.1 Hs.146806 72

G1/S transition of mitotic cell cycle

protein binding

nucleoplasm

cytosol

ubiquitin-dependent protein catabolic process

apoptosis

cell cycle arrest

negative regulation of cell proliferation

induction of apoptosis by intracellular signals

organ morphogenesis

SCF ubiquitin ligase complex

ubiquitin protein ligase binding

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

Wnt signaling pathway

TGF-beta signaling pathway

236909_at 0.307 3.093 3.011 8.661e-03 0.156 -2.591 C2orf77 chromosome 2 open reading frame 77 2 -170210180 AW339899 2q31.1 Hs.370111 2    
209028_s_at -0.400 6.373 -3.011 8.661e-03 0.156 -2.591 ABI1 abl-interactor 1 10 -27075530 AF006516 10p11.2 Hs.508148 39

intracellular

soluble fraction

nucleus

cytoplasm

endoplasmic reticulum

cytosol

cytoskeleton

transmembrane receptor protein tyrosine kinase signaling pathway

cytoskeletal protein binding

negative regulation of cell proliferation

peptidyl-tyrosine phosphorylation

synaptosome

lamellipodium

cell junction

filopodium

growth cone

synapse

 
200958_s_at -0.310 9.015 -3.011 8.666e-03 0.156 -2.591 SDCBP syndecan binding protein (syntenin) 8 59628281 NM_005625 8q12 Hs.200804 39

interleukin-5 receptor binding

nucleus

cytoplasm

endoplasmic reticulum

cytosol

cytoskeleton

plasma membrane

interleukin-5 receptor complex

adherens junction

focal adhesion

protein targeting to membrane

substrate-bound cell migration, cell extension

intracellular signaling cascade

Ras protein signal transduction

synaptic transmission

cytoskeletal adaptor activity

actin cytoskeleton organization

cell junction

melanosome

syndecan binding

protein heterodimerization activity

protein N-terminus binding

 
235967_at 0.369 5.836 3.011 8.671e-03 0.156 -2.592 LOC100127891 similar to hCG2042508 7   AV761120 7q32.2        
1553072_at 0.276 3.949 3.010 8.686e-03 0.156 -2.593 BNIPL BCL2/adenovirus E1B 19kD interacting protein like 1 149275652 NM_138279 1q21.3 Hs.591473 12

nucleus

cytosol

apoptosis

negative regulation of cell proliferation

regulation of growth rate

identical protein binding

 
200660_at 0.684 6.824 3.009 8.700e-03 0.156 -2.595 S100A11 S100 calcium binding protein A11 1 -150271605 NM_005620 1q21 Hs.417004 41

ruffle

calcium ion binding

nucleus

cytoplasm

cytoplasm

signal transduction

negative regulation of DNA replication

negative regulation of cell proliferation

protein homodimerization activity

S100 beta binding

calcium-dependent protein binding

 
238890_at -0.442 5.500 -3.009 8.705e-03 0.156 -2.595 PSMG1 proteasome (prosome, macropain) assembly chaperone 1 21 -39469253 AI791303 21q22.3 Hs.473838 12

protein binding

cytoplasm

endoplasmic reticulum

proteasome assembly

 
222916_s_at -0.366 5.661 -3.008 8.714e-03 0.156 -2.596 HDLBP high density lipoprotein binding protein 2 -241815351, -241815351 AF116718 2q37.3 Hs.471851 25

RNA binding

protein binding

nucleus

cytoplasm

plasma membrane

lipid metabolic process

lipid transport

steroid metabolic process

cholesterol metabolic process

lipid binding

high-density lipoprotein particle

 
208972_s_at 0.350 11.130 3.008 8.720e-03 0.156 -2.597 ATP5G1 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9) 17 44325146 AL080089 17q21.32 Hs.80986 16

transporter activity

mitochondrion

mitochondrial proton-transporting ATP synthase complex

ion transport

lipid binding

hydrogen ion transmembrane transporter activity

ATP synthesis coupled proton transport

proton transport

membrane

integral to membrane

proton-transporting ATP synthase complex, coupling factor F(o)

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

219667_s_at 0.232 2.368 3.008 8.723e-03 0.156 -2.597 BANK1 B-cell scaffold protein with ankyrin repeats 1 4 102930786, 102954005 NM_017935 4q24 Hs.480400 11

B cell activation

 
201148_s_at 0.303 7.204 3.007 8.728e-03 0.156 -2.598 TIMP3 TIMP metallopeptidase inhibitor 3 22 31526801 AW338933 22q12.1-q13.2 22q12.3 Hs.644633 Hs.714168 117

enzyme inhibitor activity

protein binding

extracellular region

basement membrane

visual perception

metalloendopeptidase inhibitor activity

response to organic cyclic substance

tissue regeneration

response to estrogen stimulus

response to stimulus

negative regulation of membrane protein ectodomain proteolysis

 
216304_x_at -0.314 9.276 -3.007 8.729e-03 0.156 -2.598 YME1L1 YME1-like 1 (S. cerevisiae) 10 -27439388 AJ295618 10p14 Hs.499145 Hs.74647 9

nucleotide binding

metalloendopeptidase activity

ATP binding

mitochondrion

proteolysis

peptidase activity

zinc ion binding

membrane

nucleoside-triphosphatase activity

metal ion binding

 
235549_at -0.678 4.321 -3.006 8.752e-03 0.156 -2.600 RNF144B ring finger protein 144B 6 18495572 AL575512 6p22.3 Hs.148741 6

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

apoptosis

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

protein ubiquitination during ubiquitin-dependent protein catabolic process

metal ion binding

 
221536_s_at -0.481 6.968 -3.006 8.753e-03 0.156 -2.600 LSG1 large subunit GTPase 1 homolog (S. cerevisiae) 3 -195842806 AL136897 3q29 Hs.518505 12

nucleotide binding

GTP binding

intracellular

nucleus

cytoplasm

endoplasmic reticulum

Cajal body

protein transport

hydrolase activity

nuclear export

 
214523_at 0.335 5.034 3.004 8.785e-03 0.157 -2.604 CEBPE CCAAT/enhancer binding protein (C/EBP), epsilon 14 -22656354 NM_001805 14q11.2 Hs.558308 32

transcription factor activity

nucleus

nucleolus

regulation of transcription, DNA-dependent

phagocytosis

macrophage differentiation

cytokine biosynthetic process

defense response to bacterium

sequence-specific DNA binding

protein dimerization activity

 
222771_s_at 0.282 2.820 3.004 8.790e-03 0.157 -2.604 MYEF2 myelin expression factor 2 15 -46218920 BF224052 15q21.1 Hs.6638 5

nucleotide binding

DNA binding

RNA binding

nucleus

nucleolus

Golgi apparatus

transcription

 
205414_s_at 0.459 4.890 3.003 8.802e-03 0.157 -2.605 RICH2 Rho-type GTPase-activating protein RICH2 17 12633553 NM_014859 17p12 Hs.499758 7

GTPase activator activity

protein binding

intracellular

cytoplasm

signal transduction

 
226671_at -0.592 7.116 -3.003 8.804e-03 0.157 -2.606 LAMP2 lysosomal-associated membrane protein 2 X -119454376, -119444030 AI150000 Xq24 Hs.496684 52

membrane fraction

lysosomal membrane

late endosome

plasma membrane

plasma membrane

integral to membrane

platelet dense granule membrane

platelet dense granule membrane

Lysosome

205161_s_at 0.516 5.494 3.003 8.805e-03 0.157 -2.606 PEX11A peroxisomal biogenesis factor 11 alpha 15 -88027290 NM_003847 15q26.1 Hs.31034 9

peroxisome

peroxisomal membrane

integral to peroxisomal membrane

signal transduction

membrane

integral to membrane

peroxisome fission

 
222389_s_at -0.272 7.428 -3.003 8.809e-03 0.157 -2.606 WAC WW domain containing adaptor with coiled-coil 10 28861432, 28862429 BE879807   Hs.714700 15

protein binding

nucleus

nuclear speck

 
214663_at -0.272 6.017 -3.003 8.809e-03 0.157 -2.606 DSTYK dual serine/threonine and tyrosine protein kinase 1 -203378254 AB007941 1q32.1 Hs.6874 9

nucleotide binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

transferase activity

 
220929_at 0.252 5.086 3.003 8.809e-03 0.157 -2.606 GALNT8 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8) 12 4700012 NM_017417 12p13.3 Hs.511985 2

polypeptide N-acetylgalactosaminyltransferase activity

calcium ion binding

sugar binding

Golgi apparatus

membrane

integral to membrane

transferase activity, transferring glycosyl groups

manganese ion binding

O-Glycan biosynthesis

Metabolic pathways

213758_at 0.581 6.198 3.003 8.811e-03 0.157 -2.606 COX4I1 cytochrome c oxidase subunit IV isoform 1 16 84390696 AW337510 16q22-qter Hs.433419 17

cytochrome-c oxidase activity

protein binding

nucleus

mitochondrion

mitochondrial inner membrane

generation of precursor metabolites and energy

membrane

Oxidative phosphorylation

Metabolic pathways

Cardiac muscle contraction

Alzheimer's disease

Parkinson's disease

Huntington's disease

239877_at 0.220 2.935 3.003 8.813e-03 0.157 -2.607 LOC157740 hypothetical protein C8orf9 8   AI499833 8p23.1 Hs.603618      
1570432_at -0.252 4.168 -3.002 8.825e-03 0.157 -2.608 LOC100133287 hypothetical protein LOC100133287 21   AF289552 21q22.3 Hs.684477      
219414_at 0.522 3.711 3.002 8.825e-03 0.157 -2.608 CLSTN2 calsyntenin 2 3 141136716 NM_022131 3q23-q24 Hs.158529 11

Golgi membrane

calcium ion binding

protein binding

endoplasmic reticulum

endoplasmic reticulum membrane

Golgi apparatus

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

postsynaptic membrane

 
223208_at 0.290 6.543 3.002 8.828e-03 0.157 -2.608 KCTD10 potassium channel tetramerisation domain containing 10 12 -108370842 AF113208 12q24.11 Hs.524731 Hs.708437 10

voltage-gated potassium channel activity

protein binding

nucleus

nucleolus

cytoplasm

potassium ion transport

voltage-gated potassium channel complex

membrane

 
203270_at 0.279 5.587 3.001 8.851e-03 0.157 -2.610 DTYMK deoxythymidylate kinase (thymidylate kinase) 2 -242263829, -92952 NM_012145 2q37.3 Hs.471873 12

nucleotide binding

thymidylate kinase activity

ATP binding

cytosol

dTDP biosynthetic process

cell cycle

cell proliferation

nucleotide biosynthetic process

kinase activity

transferase activity

nucleoside kinase activity

Pyrimidine metabolism

Metabolic pathways

216926_s_at 0.264 3.891 3.000 8.865e-03 0.157 -2.612 KIAA0892 KIAA0892 19 19292629 AC003030 19p13.11 Hs.654939 Hs.713004 8

chromatin

protein binding

extracellular region

nucleus

nucleoplasm

cohesin loading complex

maintenance of mitotic sister chromatid cohesion

 
229043_at -0.546 6.264 -3.000 8.865e-03 0.157 -2.612 PAPD5 PAP associated domain containing 5 16 48745568 AI492902 16q12.1 Hs.514342 5

molecular_function

DNA binding

DNA-directed DNA polymerase activity

cellular_component

nucleus

DNA replication

cell cycle

mitosis

biological_process

transferase activity

nucleotidyltransferase activity

cell division

 
229763_at 0.348 5.288 2.999 8.872e-03 0.157 -2.613 FOXP4 forkhead box P4 6 41622141 BE504097 6p21.1 Hs.131436 12

transcription factor activity

intracellular

nucleus

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

zinc ion binding

sequence-specific DNA binding

metal ion binding

 
211621_at -0.603 6.031 -2.999 8.880e-03 0.157 -2.614 AR androgen receptor X 66680598, 66705407 M73069 Xq11.2-q12 Hs.496240 1010

in utero embryonic development

transcription factor activity

receptor activity

androgen receptor activity

androgen receptor activity

receptor binding

androgen binding

nucleus

cytoplasm

transport

signal transduction

cell-cell signaling

sex differentiation

cell death

zinc ion binding

cell proliferation

male gonad development

cell growth

male somatic sex determination

androgen receptor signaling pathway

prostate gland development

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

protein dimerization activity

regulation of catalytic activity

Pathways in cancer

Prostate cancer

225546_at -0.670 7.510 -2.998 8.893e-03 0.158 -2.615 EEF2K eukaryotic elongation factor-2 kinase 16 22125092 W68180 16p12.2 Hs.498892 22

nucleotide binding

protein serine/threonine kinase activity

elongation factor-2 kinase activity

calcium ion binding

calmodulin binding

ATP binding

cytoplasm

cytosol

translational elongation

protein amino acid phosphorylation

translation factor activity, nucleic acid binding

transferase activity

 
1567030_at 0.346 5.004 2.998 8.894e-03 0.158 -2.615 SH3GLP2 SH3-domain GRB2-like pseudogene 2 17   X99660 17q11.2 Hs.684860 Hs.684861 2    
225138_at -0.513 7.678 -2.998 8.897e-03 0.158 -2.615 ZRANB1 zinc finger, RAN-binding domain containing 1 10 126620681 N52625 10q26.13 Hs.595158 3

ubiquitin-protein ligase activity

protein binding

intracellular

nucleus

cytoplasm

peptidase activity

cysteine-type peptidase activity

zinc ion binding

modification-dependent protein catabolic process

positive regulation of Wnt receptor signaling pathway

metal ion binding

 
226424_at 0.363 5.998 2.997 8.912e-03 0.158 -2.617 CAPS calcyphosine 19 5865192 AI683754 19p13.3 Hs.584744 13

calcium ion binding

cytoplasm

intracellular signaling cascade

 
209928_s_at 0.409 4.859 2.997 8.920e-03 0.158 -2.618 MSC musculin (activated B-cell factor-1) 8 -72916330 AF060154 8q21 Hs.442619 11

transcription factor activity

transcription corepressor activity

nucleus

transcription from RNA polymerase II promoter

regulation of transcription

 
210978_s_at 0.399 6.835 2.997 8.921e-03 0.158 -2.618 TAGLN2 transgelin 2 1 -158154526 BC002616 1q21-q25 Hs.517168 12

protein binding

plasma membrane

muscle organ development

nuclear membrane

 
207616_s_at -0.496 8.047 -2.997 8.923e-03 0.158 -2.618 TANK TRAF family member-associated NFKB activator 2 161701711, 161701711 NM_004180 2q24-q31 Hs.132257 22

protein binding

cytoplasm

signal transduction

zinc ion binding

metal ion binding

RIG-I-like receptor signaling pathway

210987_x_at 0.468 8.130 2.996 8.940e-03 0.158 -2.620 TPM1 tropomyosin 1 (alpha) 15 61121890, 61121890, 61127688 M19267 15q22.1 Hs.133892 76

stress fiber

positive regulation of heart rate by epinephrine

actin binding

structural constituent of cytoskeleton

cytoplasm

cytoskeleton

muscle thin filament tropomyosin

cell motion

regulation of muscle contraction

cytoskeleton organization

regulation of heart contraction

structural constituent of muscle

sarcomere

muscle filament sliding

negative regulation of cell migration

ruffle organization

bleb

ruffle membrane

positive regulation of ATPase activity

cellular response to reactive oxygen species

wound healing

sarcomere organization

positive regulation of cell adhesion

positive regulation of stress fiber formation

ventricular cardiac muscle morphogenesis

cardiac muscle contraction

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

209711_at -0.543 6.362 -2.996 8.940e-03 0.158 -2.620 SLC35D1 solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1 1 -67237603 N80922 1p32-p31 Hs.213642 8

UDP-N-acetylgalactosamine transmembrane transporter activity

endoplasmic reticulum

carbohydrate transport

UDP-N-acetylgalactosamine transport

membrane

integral to membrane

integral to endoplasmic reticulum membrane

chondroitin sulfate biosynthetic process

 
230938_x_at 0.319 7.105 2.995 8.944e-03 0.158 -2.620 ATF5 activating transcription factor 5 19 55123785 H48515 19q13.3 Hs.9754 25

transcription factor activity

RNA polymerase II transcription factor activity

transcription corepressor activity

nucleus

transcription factor complex

cytoplasm

regulation of transcription from RNA polymerase II promoter

anti-apoptosis

sequence-specific DNA binding

protein dimerization activity

 
212259_s_at -0.398 7.591 -2.995 8.946e-03 0.158 -2.620 PBXIP1 pre-B-cell leukemia homeobox interacting protein 1 1 -153183179 BF344265 1q21.3 Hs.505806 8

transcription corepressor activity

protein binding

nucleus

cytoplasm

cytosol

cytoskeleton

microtubule

multicellular organismal development

negative regulation of transcription

cell differentiation

 
205417_s_at -0.287 9.122 -2.995 8.947e-03 0.158 -2.620 DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1) 3 49482568 NM_004393 3p21 Hs.707131 Hs.76111 56

morphogenesis of an epithelial sheet

calcium ion binding

protein binding

extracellular region

basement membrane

extracellular space

membrane fraction

cytoplasm

integral to plasma membrane

protein complex assembly

muscle contraction

actin cytoskeleton

dystroglycan complex

sarcolemma

membrane raft

ECM-receptor interaction

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

227310_at 0.245 3.014 2.995 8.949e-03 0.158 -2.621 ADSS adenylosuccinate synthase 1 -242638418 AI346678 1cen-q12 Hs.498313 11

nucleotide binding

magnesium ion binding

immune system process

adenylosuccinate synthase activity

adenylosuccinate synthase activity

GTP binding

cellular_component

cytoplasm

purine nucleotide biosynthetic process

AMP biosynthetic process

AMP biosynthetic process

ligase activity

phosphate binding

Purine metabolism

Alanine, aspartate and glutamate metabolism

Biosynthesis of alkaloids derived from histidine and purine

Metabolic pathways

228837_at 0.299 5.702 2.995 8.954e-03 0.158 -2.621 TCF4 transcription factor 4 18 -51040559 BE857360 18q21.1 Hs.605153 55

transcription factor activity

protein binding

nucleus

regulation of transcription

positive regulation of transcription, DNA-dependent

protein heterodimerization activity

 
208680_at -0.397 10.706 -2.995 8.954e-03 0.158 -2.621 PRDX1 peroxiredoxin 1 1 -45749293 L19184 1p34.1 Hs.180909 62

skeletal system development

protein binding

nucleus

cytoplasm

mitochondrion

cell proliferation

oxidoreductase activity

melanosome

hydrogen peroxide catabolic process

cell redox homeostasis

peroxiredoxin activity

oxidation reduction

 
244121_at -0.529 3.663 -2.995 8.957e-03 0.158 -2.621 UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 2 170392263 BE835502 2q31.1 Hs.379548 7

suckling behavior

ubiquitin-protein ligase activity

ubiquitin-dependent protein catabolic process

sensory perception of smell

zinc ion binding

embryonic development

membrane

integral to membrane

ligase activity

metal ion binding

 
240349_at -0.423 5.553 -2.995 8.961e-03 0.158 -2.622 PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit 1 56883577 AV693202 1p31 Hs.437039 67

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

nucleoplasm

cytosol

protein amino acid phosphorylation

fatty acid biosynthetic process

cholesterol biosynthetic process

signal transduction

transferase activity

regulation of fatty acid oxidation

Regulation of autophagy

mTOR signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

Hypertrophic cardiomyopathy (HCM)

222750_s_at 0.588 5.174 2.994 8.975e-03 0.158 -2.623 SRD5A3 steroid 5 alpha-reductase 3 4 55907165 BC002480 4q12 Hs.39311 3

3-oxo-5-alpha-steroid 4-dehydrogenase activity

cytoplasm

endoplasmic reticulum

microsome

lipid metabolic process

membrane

integral to membrane

oxidoreductase activity, acting on the CH-CH group of donors

oxidation reduction

Androgen and estrogen metabolism

224771_at 0.337 4.972 2.993 8.981e-03 0.158 -2.624 NAV1 neuron navigator 1 1 199884072 AI937060 1q32.3 Hs.585374 10

nucleotide binding

cytoplasm

cytoskeleton

microtubule

multicellular organismal development

nervous system development

nucleoside-triphosphatase activity

cell differentiation

 
213155_at 0.493 5.945 2.993 8.984e-03 0.158 -2.624 WSCD1 WSC domain containing 1 17 5914657 AB011095 17p13.2 Hs.370166 2

membrane

integral to membrane

 
201197_at -0.666 7.144 -2.992 9.008e-03 0.158 -2.627 AMD1 adenosylmethionine decarboxylase 1 6 111302679, 111302680 NM_001634 6q21-q22 Hs.159118 27

adenosylmethionine decarboxylase activity

cellular_component

spermine biosynthetic process

spermidine biosynthetic process

lyase activity

Cysteine and methionine metabolism

Arginine and proline metabolism

Metabolic pathways

211086_x_at 0.218 3.870 2.992 9.008e-03 0.158 -2.627 NEK1 NIMA (never in mitosis gene a)-related kinase 1 4 -170551003 Z25431 4q33 Hs.481181 11

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

cell cycle

mitosis

transferase activity

cell division

 
210466_s_at -0.274 10.033 -2.992 9.013e-03 0.158 -2.627 SERBP1 SERPINE1 mRNA binding protein 1 1 -67646080 BC002488 1p31 Hs.719078 22

RNA binding

mRNA 3'-UTR binding

protein binding

nucleus

cytoplasm

regulation of mRNA stability

perinuclear region of cytoplasm

 
1560834_a_at 0.233 4.971 2.992 9.017e-03 0.158 -2.628 RMST rhabdomyosarcoma 2 associated transcript (non-protein coding) 12 96382929 AF429305 12q21 12q23.1 Hs.652568 2    
223314_at 0.341 5.831 2.990 9.037e-03 0.159 -2.630 TSPAN14 tetraspanin 14 10 82204017 BF025955 10q23.1 Hs.310453 5

membrane

integral to membrane

 
204688_at 0.528 6.545 2.990 9.041e-03 0.159 -2.630 SGCE sarcoglycan, epsilon 7 -94052471 NM_003919 7q21-q22 Hs.371199 46

calcium ion binding

protein binding

cytoplasm

cytoskeleton

plasma membrane

integral to plasma membrane

cell-matrix adhesion

muscle organ development

sarcoglycan complex

 
210855_at 0.238 4.501 2.990 9.048e-03 0.159 -2.631 GREB1 GREB1 protein 2 11591692, 11597530, 11600301 AF245390 2p25.1 Hs.467733 11

membrane

integral to membrane

 
214154_s_at 0.321 4.576 2.990 9.051e-03 0.159 -2.631 PKP2 plakophilin 2 12 -32834946 AA888057 12p11 Hs.164384 29

protein binding

nucleus

cytoskeleton

plasma membrane

integral to membrane

cell-cell adhesion

desmosome

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

200848_at -0.451 8.701 -2.989 9.054e-03 0.159 -2.631 AHCYL1 adenosylhomocysteinase-like 1 1 110328830 AA479488 1p13.2 Hs.705418 15

adenosylhomocysteinase activity

binding

endoplasmic reticulum

one-carbon metabolic process

metabolic process

hydrolase activity

Cysteine and methionine metabolism

Selenoamino acid metabolism

Metabolic pathways

242331_x_at -0.255 2.415 -2.989 9.071e-03 0.159 -2.633 LOC642236 similar to FRG1 protein (FSHD region gene 1 protein) 9   AV729462 9q13 Hs.203772 Hs.529357 Hs.709700 1    
209314_s_at -0.575 7.257 -2.988 9.080e-03 0.159 -2.634 HBS1L HBS1-like (S. cerevisiae) 6 -135398687, -135323215, -135323213 AK024258 6q23-q24 Hs.378532 12

nucleotide binding

translation elongation factor activity

GTPase activity

GTP binding

translation

signal transduction

 
202898_at 0.311 5.374 2.988 9.083e-03 0.159 -2.634 SDC3 syndecan 3 1 -31114899 NM_014654 1pter-p22.3 Hs.158287 35

cytoskeletal protein binding

membrane

integral to membrane

ECM-receptor interaction

Cell adhesion molecules (CAMs)

228087_at -0.309 7.124 -2.987 9.104e-03 0.159 -2.636 CCDC126 coiled-coil domain containing 126 7 23603522 AK026684 7p15.3 Hs.232296 4

extracellular region

 
229565_x_at 0.280 4.057 2.986 9.123e-03 0.160 -2.638 TBX3 T-box 3 12 -113592441 N29712 12q24.1 Hs.714737 28

skeletal system development

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

nucleolus

cytoplasm

regulation of transcription from RNA polymerase II promoter

anti-apoptosis

multicellular organismal development

cell aging

positive regulation of cell proliferation

determination of anterior/posterior axis, embryo

organ morphogenesis

general transcriptional repressor activity

male genitalia development

female genitalia development

mammary gland development

luteinizing hormone secretion

embryonic arm morphogenesis

forelimb morphogenesis

embryonic digit morphogenesis

sequence-specific DNA binding

negative regulation of myoblast differentiation

positive regulation of cell cycle

negative regulation of transcription, DNA-dependent

follicle-stimulating hormone secretion

mesoderm morphogenesis

 
228454_at -0.376 7.571 -2.986 9.125e-03 0.160 -2.638 LCOR ligand dependent nuclear receptor corepressor 10 98582726 AW663968 10q24 Hs.500695 9

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

transcription factor binding

regulation of transcription

 
234302_s_at -0.355 9.689 -2.986 9.125e-03 0.160 -2.638 ALKBH5 alkB, alkylation repair homolog 5 (E. coli) 17 18027591 AL137263 17p11.2 Hs.462392 5

membrane

integral to membrane

 
209524_at 0.498 5.690 2.985 9.134e-03 0.160 -2.639 HDGFRP3 hepatoma-derived growth factor, related protein 3 15 -81597819 AK001280 15q25.2 Hs.513954 9

nucleus

cytoplasm

growth factor activity

cell proliferation

 
208383_s_at 0.531 2.944 2.985 9.143e-03 0.160 -2.640 PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) 20 55569542 NM_002591 20q13.31 Hs.1872 40

magnesium ion binding

phosphoenolpyruvate carboxykinase (GTP) activity

phosphoenolpyruvate carboxykinase (GTP) activity

GTP binding

nucleus

nucleolus

cytoplasm

centrosome

cytosol

gluconeogenesis

lipid metabolic process

lyase activity

purine nucleotide binding

manganese ion binding

carboxylic acid binding

response to insulin stimulus

glucose homeostasis

glycerol biosynthetic process from pyruvate

Glycolysis / Gluconeogenesis

Citrate cycle (TCA cycle)

Pyruvate metabolism

Metabolic pathways

PPAR signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

208416_s_at -0.336 6.444 -2.984 9.153e-03 0.160 -2.641 SPTB spectrin, beta, erythrocytic 14 -64302901, -64282753 NM_000347 14q23-q24.2 Hs.417303 62

structural constituent of cytoskeleton

protein binding

cytoplasm

cell cortex

spectrin

spectrin-associated cytoskeleton

actin cytoskeleton

intrinsic to internal side of plasma membrane

protein complex

actin filament binding

actin filament capping

 
209298_s_at -0.691 6.219 -2.984 9.160e-03 0.160 -2.642 ITSN1 intersectin 1 (SH3 domain protein) 21 33936653, 33936653 AF114488 21q22.1-q22.2 Hs.160324 39

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

calcium ion binding

protein binding

intracellular

intracellular signaling cascade

membrane

synaptosome

lamellipodium

cell junction

regulation of Rho protein signal transduction

synapse

synaptic vesicle endocytosis

 
233632_s_at -0.564 7.190 -2.983 9.167e-03 0.160 -2.643 XRN1 5'-3' exoribonuclease 1 3 -143508138 AL117516 3q23 Hs.435103 12

DNA binding

RNA binding

protein binding

intracellular

cytoplasm

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

5'-3' exonuclease activity

hydrolase activity

RNA degradation

1569617_at 0.277 4.959 2.983 9.170e-03 0.160 -2.643 OSBP2 oxysterol binding protein 2 22 29420792 BC018025 22q12.2 Hs.517546 11

lipid transport

steroid metabolic process

membrane

 
204716_at -0.396 3.852 -2.983 9.184e-03 0.160 -2.644 CCDC6 coiled-coil domain containing 6 10 -61218526 NM_005436 10q21 Hs.591360 20

structural constituent of cytoskeleton

protein binding

cellular_component

cytoplasm

cytoskeleton

biological_process

SH3 domain binding

Pathways in cancer

Thyroid cancer

213474_at 0.276 5.735 2.981 9.207e-03 0.161 -2.647 KCTD7 potassium channel tetramerisation domain containing 7 7 65731324 AI890903 7q11.21 Hs.546627 6

voltage-gated potassium channel activity

protein binding

potassium ion transport

voltage-gated potassium channel complex

membrane

 
211686_s_at -0.388 6.971 -2.981 9.216e-03 0.161 -2.648 MAK16 MAK16 homolog (S. cerevisiae) 8 33462226 AF251062 8p12 Hs.583805 10

nucleus

nucleolus

 
226202_at -0.458 4.773 -2.980 9.239e-03 0.161 -2.650 ZNF398 zinc finger protein 398 7 148454440, 148475492 AI761824 7q36.1 Hs.654721 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

transcription activator activity

metal ion binding

 
205008_s_at 0.660 6.424 2.979 9.242e-03 0.161 -2.650 CIB2 calcium and integrin binding family member 2 15 -76184045 NM_006383 15q24 Hs.129867 6

calcium ion binding

protein binding

 
229653_at -0.300 5.565 -2.979 9.254e-03 0.161 -2.651 VPS53 vacuolar protein sorting 53 homolog (S. cerevisiae) 17 -382282, -361479 AA514634 17p13.3 Hs.461819 11

endosome

Golgi apparatus

protein transport

membrane

 
218307_at 0.330 7.716 2.978 9.267e-03 0.161 -2.653 RSAD1 radical S-adenosyl methionine domain containing 1 17 45911188 NM_018346 17q21.33 Hs.8033 3

coproporphyrinogen oxidase activity

iron ion binding

cytoplasm

mitochondrion

porphyrin biosynthetic process

oxidoreductase activity

metal ion binding

4 iron, 4 sulfur cluster binding

oxidation reduction

 
227298_at 0.286 5.515 2.978 9.268e-03 0.161 -2.653 FLJ37798 hypothetical gene supported by AK095117 6   AI806330 6p12.3 Hs.544586 1    
217978_s_at -0.268 7.870 -2.978 9.275e-03 0.161 -2.653 UBE2Q1 ubiquitin-conjugating enzyme E2Q family member 1 1 -152787674 NM_017582 1q21.3 Hs.607928 7

nucleotide binding

ubiquitin-protein ligase activity

protein binding

ATP binding

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

228568_at 1.116 6.963 2.978 9.276e-03 0.161 -2.653 GCOM1 GRINL1A complex locus 15 55671405, 55671405 AI926697 15q21.3 Hs.437256 7    
209896_s_at -0.944 6.546 -2.978 9.279e-03 0.161 -2.654 PTPN11 protein tyrosine phosphatase, non-receptor type 11 12 111340918 AF119855 12q24 Hs.506852 Hs.646231 326

non-membrane spanning protein tyrosine phosphatase activity

non-membrane spanning protein tyrosine phosphatase activity

protein binding

cytoplasm

cytosol

protein amino acid dephosphorylation

signal transduction

hydrolase activity

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Adipocytokine signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

Renal cell carcinoma

Chronic myeloid leukemia

1554761_a_at -0.421 5.634 -2.977 9.284e-03 0.161 -2.654 HEATR2 HEAT repeat containing 2 7 732863 BC010850 7p22.3 Hs.535896 8

protein binding

 
209326_at -0.433 5.845 -2.977 9.284e-03 0.161 -2.654 SLC35A2 solute carrier family 35 (UDP-galactose transporter), member A2 X -48645833, -48645832, -48645402 D84454 Xp11.23-p11.22 Hs.21899 12

Golgi membrane

nucleotide-sugar transmembrane transporter activity

sugar:hydrogen symporter activity

UDP-galactose transmembrane transporter activity

Golgi apparatus

galactose metabolic process

nucleotide-sugar transport

UDP-galactose transport

membrane

integral to membrane

 
238148_s_at 0.452 4.736 2.977 9.285e-03 0.161 -2.654 ZNF818P zinc finger protein 818 pseudogene 19   AI651641 19q13.42 Hs.444446  

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
208329_at 0.280 2.993 2.977 9.293e-03 0.161 -2.655 PBOV1 prostate and breast cancer overexpressed 1 6 -138578819 NM_021635 6q23-q24 Hs.302016 6

nucleus

cytoplasm

 
1558668_s_at 0.424 2.445 2.976 9.317e-03 0.162 -2.658 SPATA22 spermatogenesis associated 22 17 -3290063 AW072392 17p13.3 Hs.351068 3    
202460_s_at 0.401 4.845 2.975 9.318e-03 0.162 -2.658 LPIN2 lipin 2 18 -2906991 NM_014646 18p11.31 Hs.132342 10

nucleus

phosphatidate phosphatase activity

 
236050_at 0.262 5.484 2.975 9.322e-03 0.162 -2.658 C11orf35 chromosome 11 open reading frame 35 11 -544856 AI656897 11p15.5 Hs.669395 2    
212131_at -0.524 8.418 -2.975 9.325e-03 0.162 -2.658 LSM14A LSM14A, SCD6 homolog A (S. cerevisiae) 19 39355191 BG054966 19q13.11 Hs.718430 6    
227994_x_at 0.531 8.313 2.975 9.330e-03 0.162 -2.659 PPDPF pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish) 20 61622576 AA548838 20q13.33 Hs.79625 3

multicellular organismal development

cell differentiation

 
235426_at 0.266 4.629 2.975 9.335e-03 0.162 -2.659 GATM glycine amidinotransferase (L-arginine:glycine amidinotransferase) 15 -43440613 AW293951 15q21.1 Hs.75335 23

cytoplasm

mitochondrion

mitochondrial inner membrane

mitochondrial intermembrane space

creatine biosynthetic process

response to oxidative stress

response to nutrient

embryonic development

response to organic substance

glycine amidinotransferase activity

membrane

transferase activity

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines

tissue regeneration

response to peptide hormone stimulus

response to mercury ion

Glycine, serine and threonine metabolism

Arginine and proline metabolism

Metabolic pathways

209320_at 0.266 6.168 2.974 9.343e-03 0.162 -2.660 ADCY3 adenylate cyclase 3 2 -24895541 AF033861 2p23.3 Hs.467898 28

nucleotide binding

magnesium ion binding

calmodulin binding

ATP binding

plasma membrane

integral to plasma membrane

cAMP biosynthetic process

female meiosis

intracellular signaling cascade

sensory perception of smell

calcium- and calmodulin-responsive adenylate cyclase activity

membrane raft

response to stimulus

Purine metabolism

Calcium signaling pathway

Chemokine signaling pathway

Vascular smooth muscle contraction

Gap junction

Olfactory transduction

GnRH signaling pathway

Melanogenesis

Vibrio cholerae infection

212871_at -0.515 5.925 -2.974 9.354e-03 0.162 -2.661 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 12 110764661 NM_003668 12q24.12-q24.13 Hs.413901 16

nucleotide binding

protein serine/threonine kinase activity

MAP kinase kinase activity

protein binding

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

signal transduction

transferase activity

MAPK signaling pathway

203921_at 0.275 4.537 2.973 9.368e-03 0.162 -2.662 CHST2 carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2 3 144321357 NM_004267 3q24 Hs.8786 19

N-acetylglucosamine 6-O-sulfotransferase activity

Golgi apparatus

trans-Golgi network

carbohydrate metabolic process

N-acetylglucosamine metabolic process

sulfur metabolic process

inflammatory response

multicellular organismal development

membrane

integral to membrane

transferase activity

intrinsic to Golgi membrane

Keratan sulfate biosynthesis

Metabolic pathways

215429_s_at 0.321 6.481 2.973 9.368e-03 0.162 -2.663 ZNF428 zinc finger protein 428 19 -48803216 BE045982 19q13.31 Hs.719387 Hs.99093 2

intracellular

zinc ion binding

metal ion binding

 
213165_at -0.511 8.183 -2.973 9.368e-03 0.162 -2.663 CEP350 centrosomal protein 350kDa 1 178190530 AI041204 1p36.13-q41 Hs.413045 17

nucleus

centrosome

spindle

 
223279_s_at -0.391 9.371 -2.973 9.373e-03 0.162 -2.663 UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 15 -68733946, -68733946 AF322916 15q22-q24 Hs.108049 12

molecular_function

protein binding

extracellular region

membrane fraction

soluble fraction

nucleus

nuclear envelope

cytoplasm

cytosol

cytoskeleton

DNA damage response, signal transduction resulting in induction of apoptosis

induction of apoptosis by oxidative stress

response to UV

viral reproduction

positive regulation of protein import into nucleus

negative regulation of NF-kappaB import into nucleus

positive regulation of apoptosis

positive regulation of caspase activity

apoptosome

perinuclear region of cytoplasm

negative regulation of inflammatory response

 
201721_s_at 0.608 5.930 2.973 9.373e-03 0.162 -2.663 LAPTM5 lysosomal protein transmembrane 5 1 -30977901 NM_006762 1p34 Hs.371021 8

lysosomal membrane

integral to plasma membrane

transport

membrane

Lysosome

230683_at 0.299 3.848 2.973 9.374e-03 0.162 -2.663 ANKRD60 ankyrin repeat domain 60 20   W56760 20q13.32   1    
217853_at 0.657 8.284 2.972 9.377e-03 0.162 -2.663 TNS3 tensin 3 7 -47281276 NM_022748 7p12.3 Hs.520814 12

protein binding

nucleus

nucleolus

cytoplasm

plasma membrane

focal adhesion

positive regulation of cell proliferation

cell migration

cell junction

lung alveolus development

 
225551_at -0.717 7.161 -2.972 9.386e-03 0.162 -2.664 C1orf71 chromosome 1 open reading frame 71 1 244796261, 244796261 AW291187 1q44 Hs.368353 9

membrane

integral to membrane

protein complex

 
238125_at 0.342 4.682 2.971 9.399e-03 0.162 -2.666 ADAMTS16 ADAM metallopeptidase with thrombospondin type 1 motif, 16 5 5193442 AI740544 5p15 Hs.661915 4

metalloendopeptidase activity

extracellular region

proteinaceous extracellular matrix

proteolysis

peptidase activity

zinc ion binding

metal ion binding

 
225447_at -0.692 7.547 -2.971 9.401e-03 0.162 -2.666 GPD2 glycerol-3-phosphate dehydrogenase 2 (mitochondrial) 2 157000210, 157001145 AA613031 2q24.1 Hs.512382 20

glycerol-3-phosphate dehydrogenase activity

calcium ion binding

mitochondrion

mitochondrial inner membrane

glycerol-3-phosphate metabolic process

gluconeogenesis

glycerol-3-phosphate dehydrogenase complex

oxidoreductase activity

oxidation reduction

Glycerophospholipid metabolism

225897_at 0.519 6.577 2.971 9.406e-03 0.162 -2.666 MARCKS myristoylated alanine-rich protein kinase C substrate 6 114285219 AI709406 6q22.2 Hs.519909 Hs.712721 41

protein kinase C binding

calmodulin binding

cytoplasm

centrosome

cell cortex

actin cytoskeleton

membrane

germinal vesicle

actin filament binding

Fc gamma R-mediated phagocytosis

1558044_s_at 0.501 7.195 2.971 9.409e-03 0.162 -2.667 EXOSC6 exosome component 6 16 -68841634 BF692729 16q22.1 Hs.660633 Hs.719211 9

3'-5'-exoribonuclease activity

exosome (RNase complex)

RNA binding

exonuclease activity

nucleus

nucleolus

cytoplasm

rRNA processing

RNA processing

hydrolase activity

RNA degradation

223176_at -0.496 5.931 -2.971 9.411e-03 0.162 -2.667 KCTD20 potassium channel tetramerisation domain containing 20 6 36518521 BC003697 6p21.31 Hs.188757 4

voltage-gated potassium channel activity

potassium ion transport

voltage-gated potassium channel complex

membrane

identical protein binding

 
215590_x_at -0.421 6.356 -2.971 9.412e-03 0.162 -2.667 LOC100128640 hypothetical protein LOC100128640 3   AK025619 3p22.2        
224718_at -0.347 6.823 -2.969 9.441e-03 0.163 -2.670 YY1 YY1 transcription factor 14 99774854 AK025731 14q Hs.388927 97

transcription factor activity

transcription coactivator activity

transcription corepressor activity

protein binding

intracellular

nucleus

transcription factor complex

plasma membrane

regulation of transcription from RNA polymerase II promoter

zinc ion binding

anterior/posterior pattern formation

nuclear matrix

PcG protein complex

metal ion binding

camera-type eye morphogenesis

 
201670_s_at 0.465 6.420 2.969 9.445e-03 0.163 -2.670 MARCKS myristoylated alanine-rich protein kinase C substrate 6 114285219 M68956 6q22.2 Hs.519909 Hs.712721 41

protein kinase C binding

calmodulin binding

cytoplasm

centrosome

cell cortex

actin cytoskeleton

membrane

germinal vesicle

actin filament binding

Fc gamma R-mediated phagocytosis

200934_at -0.718 9.031 -2.969 9.449e-03 0.163 -2.670 DEK DEK oncogene 6 -18332380, -18332378 NM_003472 6p22.3 Hs.484813 55

DNA binding

specific RNA polymerase II transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

signal transduction

viral genome replication

histone binding

 
202305_s_at -0.628 8.832 -2.968 9.452e-03 0.163 -2.671 FEZ2 fasciculation and elongation protein zeta 2 (zygin II) 2 -36632904 AI685892 2p21 Hs.258563 9

protein binding

signal transduction

nervous system development

axon guidance

 
225663_at -0.420 8.809 -2.968 9.453e-03 0.163 -2.671 ACBD5 acyl-Coenzyme A binding domain containing 5 10 -27524149, -27524149 AL047650 10p12.1 Hs.530597 4

acyl-CoA binding

transport

lipid binding

membrane

integral to membrane

 
229500_at -0.434 4.475 -2.968 9.464e-03 0.163 -2.672 SLC30A9 solute carrier family 30 (zinc transporter), member 9 4 41687279 AI609256 4p13-p12 Hs.479634 6

nucleotide binding

transcription factor activity

nucleus

cytoskeleton

cation transport

zinc ion transport

biological_process

zinc ion binding

cation transmembrane transporter activity

membrane

integral to membrane

regulation of transcription

 
211185_s_at -0.320 9.862 -2.967 9.473e-03 0.163 -2.673 SF3B1 splicing factor 3b, subunit 1, 155kDa 2 -197991765, -197964942 AF130099 2q33.1 Hs.632554 34

nuclear mRNA splicing, via spliceosome

nuclear mRNA splicing, via spliceosome

protein binding

nucleus

spliceosomal complex

RNA splicing

nuclear speck

RNA splicing factor activity, transesterification mechanism

 
232874_at 0.527 4.632 2.967 9.487e-03 0.163 -2.674 DOCK9 dedicator of cytokinesis 9 13 -98310435, -98310435, -98243741, -98243741 AU146550 13q32.3 Hs.596105 15

guanyl-nucleotide exchange factor activity

GTP binding

cellular_component

biological_process

membrane

GTPase binding

 
205485_at -0.411 10.664 -2.967 9.489e-03 0.163 -2.674 RYR1 ryanodine receptor 1 (skeletal) 19 43616179 NM_000540 19q13.1 Hs.466664 130

response to hypoxia

receptor activity

ion channel activity

ryanodine-sensitive calcium-release channel activity

calcium ion binding

calmodulin binding

cytoplasm

smooth endoplasmic reticulum

plasma membrane

integral to plasma membrane

cell cortex

ion transport

calcium ion transport

muscle contraction

junctional sarcoplasmic reticulum membrane

terminal cisterna

calcium-release channel activity

response to caffeine

I band

release of sequestered calcium ion into cytosol

cytosolic calcium ion homeostasis

Calcium signaling pathway

Long-term depression

204742_s_at -0.438 6.154 -2.966 9.499e-03 0.163 -2.675 PDS5B PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae) 13 32058591 NM_015032 13q12.3 Hs.716441 15

chromatin

DNA binding

ATP binding

nucleus

cell cycle

mitotic sister chromatid cohesion

mitosis

negative regulation of cell proliferation

identical protein binding

cell division

 
226735_at -0.455 7.036 -2.965 9.518e-03 0.163 -2.677 TAPT1 transmembrane anterior posterior transformation 1 4 -15771225 AI239899 4p15.32 Hs.479223 5

receptor activity

multicellular organismal development

membrane

integral to membrane

 
209823_x_at 0.442 6.289 2.965 9.522e-03 0.163 -2.678 HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 6 -32735634 M17955 6p21.3 Hs.409934 Hs.534322 Hs.713773 998

antigen processing and presentation of peptide or polysaccharide antigen via MHC class II

plasma membrane

immune response

immune response

membrane

membrane

integral to membrane

MHC class II receptor activity

MHC class II protein complex

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

235167_at -0.579 5.360 -2.965 9.523e-03 0.163 -2.678 LOC100190986 hypothetical LOC100190986 16 -21783123, -21350846, 22423270 BE972419 16p12.2 Hs.611072 Hs.648439 2    
1554462_a_at -0.696 7.075 -2.965 9.524e-03 0.163 -2.678 DNAJB9 DnaJ (Hsp40) homolog, subfamily B, member 9 7 107997591 AF115512 14q24.2-q24.3 7q31 Hs.6790 16

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

protein folding

heat shock protein binding

unfolded protein binding

 
1553528_a_at -0.420 4.113 -2.965 9.528e-03 0.163 -2.678 TAF5 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa 10 105117713 NM_139052 10q24-q25.2 Hs.96103 37

transcription factor activity

transcription factor activity

histone acetyltransferase activity

nucleus

nucleoplasm

transcription factor TFIID complex

nucleolus

cytoplasm

cytoskeleton

transcription initiation from RNA polymerase II promoter

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

promoter binding

chromatin modification

transcription initiation factor activity

transcription factor TFTC complex

interspecies interaction between organisms

regulation of transcription

protein dimerization activity

Basal transcription factors

213373_s_at 0.474 4.414 2.964 9.530e-03 0.163 -2.678 CASP8 caspase 8, apoptosis-related cysteine peptidase 2 201806410, 201806410, 201830998, 201833467 BF439983 2q33-q34 Hs.599762 362

cysteine-type endopeptidase activity

nucleus

cytoplasm

mitochondrion

cytosol

cytoskeleton

peptidase activity

induction of apoptosis by extracellular signals

induction of apoptosis by extracellular signals

activation of pro-apoptotic gene products

death-inducing signaling complex

response to tumor necrosis factor

identical protein binding

regulation of apoptosis

positive regulation of I-kappaB kinase/NF-kappaB cascade

proteolysis involved in cellular protein catabolic process

p53 signaling pathway

Apoptosis

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

Alzheimer's disease

Huntington's disease

Pathways in cancer

223412_at -0.707 5.430 -2.963 9.552e-03 0.163 -2.680 KBTBD7 kelch repeat and BTB (POZ) domain containing 7 13 -40663710 AL136782 13q14.11 Hs.63841 9

molecular_function

protein binding

cellular_component

biological_process

 
209147_s_at -0.395 9.090 -2.963 9.562e-03 0.164 -2.681 PPAP2A phosphatidic acid phosphatase type 2A 5 -54756439 AB000888 5q11 Hs.696231 20

membrane fraction

cytosol

plasma membrane

integral to plasma membrane

activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway

phosphatidate phosphatase activity

phosphatidate phosphatase activity

phosphatidate phosphatase activity

negative regulation of cell proliferation

germ cell migration

hydrolase activity

regulation of lipid metabolic process

androgen receptor signaling pathway

phospholipid dephosphorylation

Glycerolipid metabolism

Glycerophospholipid metabolism

Ether lipid metabolism

Sphingolipid metabolism

Metabolic pathways

Fc gamma R-mediated phagocytosis

1558166_at 0.275 3.666 2.962 9.568e-03 0.164 -2.682 MGC16275 hypothetical protein MGC16275 17 -69717735 BM824870 17q25.1 Hs.706954 1    
223022_s_at -0.448 7.699 -2.962 9.569e-03 0.164 -2.682 VTA1 Vps20-associated 1 homolog (S. cerevisiae) 6 142510102 AL136684 6q24.1 Hs.431367 12

cytoplasm

endosome

protein transport

membrane

Endocytosis

232024_at 0.737 5.023 2.962 9.571e-03 0.164 -2.682 GIMAP2 GTPase, IMAP family member 2 7 150013726 AI431931 7q36.1 Hs.647071 5

nucleotide binding

GTP binding

membrane

integral to membrane

 
1561281_a_at 0.267 3.189 2.962 9.581e-03 0.164 -2.683 LOC284576 hypothetical protein LOC284576 1   AK090497 1q32.1 Hs.585440 1    
226758_at 0.370 7.640 2.962 9.585e-03 0.164 -2.684 LUC7L2 LUC7-like 2 (S. cerevisiae) 7 138695173 AA043552 7q34 Hs.718441 16

zinc ion binding

enzyme binding

metal ion binding

 
1564166_s_at 0.345 4.847 2.961 9.602e-03 0.164 -2.685 PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 7 101823808 AK098276 7q22.1 Hs.406395 6

double-stranded RNA binding

protein kinase inhibitor activity

protein binding

nucleus

nucleolus

negative regulation of protein kinase activity

protein kinase binding

negative regulation of phosphorylation

 
236217_at 0.272 2.847 2.961 9.604e-03 0.164 -2.685 SLC31A1 solute carrier family 31 (copper transporters), member 1 9 115023628 AI885320 9q31-q32 Hs.532315 24

copper ion transmembrane transporter activity

copper ion binding

integral to plasma membrane

ion transport

copper ion transport

membrane

 
1558841_at -0.275 4.430 -2.961 9.607e-03 0.164 -2.686 SDCCAG10 serologically defined colon cancer antigen 10 5 64100510 AL833769 5q12.3 Hs.371372 6

peptidyl-prolyl cis-trans isomerase activity

nucleus

protein folding

isomerase activity

 
218744_s_at -0.482 8.410 -2.960 9.621e-03 0.164 -2.687 PACSIN3 protein kinase C and casein kinase substrate in neurons 3 11 -47155656 NM_016223 11p12-p11.12 Hs.334639 14

cytoplasm

plasma membrane

cytoskeletal protein binding

negative regulation of endocytosis

positive regulation of membrane protein ectodomain proteolysis

 
213789_at 0.249 5.459 2.959 9.631e-03 0.164 -2.688 EBP emopamil binding protein (sterol isomerase) X 48265107 N58493 Xp11.23-p11.22 Hs.30619 19

C-8 sterol isomerase activity

skeletal system development

steroid delta-isomerase activity

transmembrane receptor activity

endoplasmic reticulum

microsome

integral to plasma membrane

cholesterol biosynthetic process

drug transporter activity

membrane

isomerase activity

hemopoiesis

cholestenol delta-isomerase activity

Steroid biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

227327_at 0.295 6.709 2.959 9.637e-03 0.164 -2.689 MEGF8 multiple EGF-like-domains 8 19 47521600 BF062538 19q12 Hs.132483 6

structural molecule activity

calcium ion binding

cellular_component

biological_process

membrane

integral to membrane

 
212538_at 0.409 7.318 2.959 9.641e-03 0.164 -2.689 DOCK9 dedicator of cytokinesis 9 13 -98310435, -98310435, -98243741, -98243741 AL576253 13q32.3 Hs.596105 15

guanyl-nucleotide exchange factor activity

GTP binding

cellular_component

biological_process

membrane

GTPase binding

 
218584_at 0.306 6.253 2.959 9.642e-03 0.164 -2.689 TCTN1 tectonic family member 1 12 109536262 NM_024549 12q24.11 Hs.211511 Hs.694390 5

extracellular region

multicellular organismal development

 
203664_s_at -0.412 5.923 -2.958 9.650e-03 0.164 -2.690 POLR2D polymerase (RNA) II (DNA directed) polypeptide D 2 -128320310 NM_004805 2q21 Hs.554831 80

nucleotide binding

nuclear mRNA splicing, via spliceosome

catalytic activity

DNA-directed RNA polymerase activity

nucleus

nucleoplasm

DNA-directed RNA polymerase II, core complex

transcription

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

cellular metabolic process

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

Huntington's disease

202500_at -0.272 8.154 -2.958 9.650e-03 0.164 -2.690 DNAJB2 DnaJ (Hsp40) homolog, subfamily B, member 2 2 219852283 NM_006736 2q32-q34 Hs.77768 17

protein folding

response to unfolded protein

heat shock protein binding

unfolded protein binding

 
216598_s_at 0.694 5.232 2.958 9.656e-03 0.164 -2.690 CCL2 chemokine (C-C motif) ligand 2 17 29606408 S69738 17q11.2-q12 Hs.303649 505

G-protein-coupled receptor binding

positive regulation of endothelial cell proliferation

monocyte chemotaxis

protein kinase activity

signal transducer activity

extracellular region

extracellular space

cytoplasm

protein amino acid phosphorylation

cellular calcium ion homeostasis

anti-apoptosis

chemotaxis

inflammatory response

humoral immune response

cell adhesion

transforming growth factor beta receptor signaling pathway

G-protein signaling, coupled to cyclic nucleotide second messenger

JAK-STAT cascade

chemokine activity

response to bacterium

organ morphogenesis

viral genome replication

cytokine-mediated signaling pathway

CCR2 chemokine receptor binding

cell soma

vascular endothelial growth factor receptor signaling pathway

macrophage chemotaxis

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

221426_s_at 0.260 5.519 2.957 9.672e-03 0.164 -2.692 OR3A3 olfactory receptor, family 3, subfamily A, member 3 17 3270611 NM_012373 17p13.3 Hs.532689 8

receptor activity

olfactory receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

sensory perception of smell

integral to membrane

response to stimulus

Olfactory transduction

207177_at 0.271 2.924 2.957 9.674e-03 0.164 -2.692 PTGFR prostaglandin F receptor (FP) 1 78729315 NM_000959 1p31.1 Hs.654365 38

receptor activity

G-protein coupled receptor activity

prostaglandin F receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

parturition

Calcium signaling pathway

Neuroactive ligand-receptor interaction

205413_at -1.529 6.229 -2.957 9.686e-03 0.164 -2.693 MPPED2 metallophosphoesterase domain containing 2 11 -30388194, -30362615 NM_001584 11p13 Hs.289795 8

nervous system development

hydrolase activity

 
200870_at -0.371 10.211 -2.956 9.688e-03 0.164 -2.693 STRAP serine/threonine kinase receptor associated protein 12 15926554 NM_007178 12p12.3 Hs.719087 23

nucleus

spliceosomal complex

cytoplasm

mRNA processing

RNA splicing

identical protein binding

 
209661_at 0.349 5.987 2.956 9.692e-03 0.165 -2.694 KIFC3 kinesin family member C3 16 -56349629, -56349629 BC001211 16q13-q21 Hs.23131 10

nucleotide binding

microtubule motor activity

ATP binding

Golgi apparatus

kinesin complex

microtubule

microtubule-based movement

Golgi organization

visual perception

 
223019_at 0.289 6.214 2.956 9.701e-03 0.165 -2.695 FAM129B family with sequence similarity 129, member B 9 -129307438, -129307438 BC001979 9q33.3-q34.11 Hs.522401 8    
202625_at 0.333 3.374 2.955 9.707e-03 0.165 -2.695 LYN v-yes-1 Yamaguchi sarcoma viral related oncogene homolog 8 56954939 AI356412 8q13 Hs.699154 216

nucleotide binding

non-membrane spanning protein tyrosine kinase activity

receptor signaling protein tyrosine kinase activity

protein binding

protein binding

ATP binding

nucleus

cytoplasm

Golgi apparatus

plasma membrane

plasma membrane

protein amino acid phosphorylation

signal transduction

positive regulation of cell proliferation

response to hormone stimulus

transferase activity

erythrocyte differentiation

positive regulation of tyrosine phosphorylation of STAT protein

interspecies interaction between organisms

membrane raft

Chemokine signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Long-term depression

Epithelial cell signaling in Helicobacter pylori infection

230179_at -0.575 7.684 -2.955 9.717e-03 0.165 -2.696 LOC285812 hypothetical protein LOC285812 6   N52572 6p23 Hs.593631      
201660_at -0.448 8.855 -2.955 9.717e-03 0.165 -2.696 ACSL3 acyl-CoA synthetase long-chain family member 3 2 223433975 AL525798 2q34-q35 Hs.655772 20

nucleotide binding

magnesium ion binding

fatty-acyl-CoA synthase activity

long-chain-fatty-acid-CoA ligase activity

protein binding

ATP binding

mitochondrion

mitochondrial outer membrane

peroxisome

endoplasmic reticulum

microsome

lipid metabolic process

fatty acid metabolic process

metabolic process

membrane

integral to membrane

ligase activity

Fatty acid metabolism

Metabolic pathways

PPAR signaling pathway

Adipocytokine signaling pathway

36612_at -0.445 6.374 -2.955 9.722e-03 0.165 -2.696 FAM168A family with sequence similarity 168, member A 11 -72794675 D87470 11q13.4 Hs.475334 3    
212192_at 0.615 7.766 2.954 9.729e-03 0.165 -2.697 KCTD12 potassium channel tetramerisation domain containing 12 13 -76352304 AI718937 13q22.3 Hs.644125 14

voltage-gated potassium channel activity

protein binding

potassium ion transport

voltage-gated potassium channel complex

membrane

 
202980_s_at -0.475 5.526 -2.954 9.733e-03 0.165 -2.698 SIAH1 seven in absentia homolog 1 (Drosophila) 16 -46951954, -46951946 AI953523 16q12 Hs.295923 64

ubiquitin-protein ligase activity

nucleus

cytoplasm

proteolysis

ubiquitin-dependent protein catabolic process

apoptosis

cell cycle

multicellular organismal development

spermatogenesis

nervous system development

axon guidance

protein C-terminus binding

zinc ion binding

anatomical structure morphogenesis

protein ubiquitination

ligase activity

cell differentiation

metal ion binding

p53 signaling pathway

Ubiquitin mediated proteolysis

Wnt signaling pathway

224881_at -0.434 7.082 -2.954 9.736e-03 0.165 -2.698 VKORC1L1 vitamin K epoxide reductase complex, subunit 1-like 1 7 64975691 AV724827 7q11.21 Hs.427232 5

membrane

integral to membrane

 
225130_at -0.275 5.923 -2.954 9.737e-03 0.165 -2.698 ZRANB1 zinc finger, RAN-binding domain containing 1 10 126620681 AW003734 10q26.13 Hs.595158 3

ubiquitin-protein ligase activity

protein binding

intracellular

nucleus

cytoplasm

peptidase activity

cysteine-type peptidase activity

zinc ion binding

modification-dependent protein catabolic process

positive regulation of Wnt receptor signaling pathway

metal ion binding

 
217886_at -0.525 7.908 -2.953 9.749e-03 0.165 -2.699 EPS15 epidermal growth factor receptor pathway substrate 15 1 -51592523, -51592522 BF213575 1p32 Hs.83722 63

calcium ion binding

protein binding

cytoplasm

endosome

cytosol

plasma membrane

coated pit

epidermal growth factor receptor signaling pathway

cell proliferation

protein transport

vesicle organization

SH3 domain binding

Endocytosis

214505_s_at -0.801 12.494 -2.953 9.762e-03 0.165 -2.700 FHL1 four and a half LIM domains 1 X 135056526, 135057224, 135058402, 135079120, 135079731, 135106578, 135106720 AF220153 Xq26 Hs.435369 38

molecular_function

cellular_component

nucleus

cytoplasm

cytosol

multicellular organismal development

muscle organ development

zinc ion binding

organ morphogenesis

cell growth

cell differentiation

metal ion binding

 
220663_at 0.301 4.602 2.952 9.772e-03 0.165 -2.701 IL1RAPL1 interleukin 1 receptor accessory protein-like 1 X 28515601 NM_014271 Xp22.1-p21.3 Hs.658912 18

transmembrane receptor activity

signal transduction

learning or memory

membrane

integral to membrane

innate immune response

 
209502_s_at 0.385 4.050 2.952 9.781e-03 0.165 -2.702 BAIAP2 BAI1-associated protein 2 17 76623541, 76623541 BC002495 17q25 Hs.128316 37

ruffle

cytoplasm

plasma membrane

signal transduction

axonogenesis

protein C-terminus binding

cytoskeletal adaptor activity

insulin receptor signaling pathway

SH3 domain binding

filopodium

filopodium assembly

Adherens junction

Regulation of actin cytoskeleton

232204_at 0.444 4.408 2.951 9.786e-03 0.165 -2.703 EBF1 early B-cell factor 1 5 -158055500 AF208502 5q34 Hs.573143 21

DNA binding

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

transcription regulator activity

metal ion binding

 
1555905_a_at -0.979 4.532 -2.951 9.788e-03 0.165 -2.703 C3orf23 chromosome 3 open reading frame 23 3 44354614, 44354947, 44354947 AI147556 3p21.31 Hs.55131 8

mitochondrion

 
223014_at -0.337 9.545 -2.951 9.792e-03 0.165 -2.703 UBE2R2 ubiquitin-conjugating enzyme E2R 2 9 33807181 BC004862 9p13.3 Hs.718444 9

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

229368_s_at -0.331 5.140 -2.951 9.801e-03 0.165 -2.704 ZFAND5 zinc finger, AN1-type domain 5 9 -74156160 AI658995 9q13-q21 Hs.406096 6

in utero embryonic development

vasculature development

respiratory system process

molecular_function

DNA binding

cellular_component

biological_process

zinc ion binding

fibroblast migration

metal ion binding

platelet-derived growth factor receptor signaling pathway

skeletal system morphogenesis

smooth muscle tissue development

face development

 
204897_at 0.530 6.772 2.951 9.803e-03 0.165 -2.704 PTGER4 prostaglandin E receptor 4 (subtype EP4) 5 40715788 AA897516 5p13.1 Hs.199248 63

receptor activity

G-protein coupled receptor activity

prostaglandin E receptor activity

plasma membrane

immune response

signal transduction

G-protein coupled receptor protein signaling pathway

G-protein signaling, coupled to cAMP nucleotide second messenger

integral to membrane

regulation of ossification

Neuroactive ligand-receptor interaction

228135_at -0.402 7.598 -2.951 9.805e-03 0.165 -2.704 C1orf52 chromosome 1 open reading frame 52 1 -85488226 AA738437 1p22.3 Hs.26226 7    
201807_at -0.287 8.724 -2.950 9.821e-03 0.165 -2.706 VPS26A vacuolar protein sorting 26 homolog A (S. pombe) 10 70553913 NM_004896 10q21.1 Hs.499925 17

protein binding

cytoplasm

endosome

cytosol

vacuolar transport

protein transporter activity

protein transport

membrane

retromer complex

retrograde transport, endosome to Golgi

 
220495_s_at -0.316 7.451 -2.950 9.821e-03 0.165 -2.706 TXNDC15 thioredoxin domain containing 15 5 134237358 NM_024715 5q31.1 Hs.696335 7

membrane

integral to membrane

cell redox homeostasis

 
1556854_at 0.510 2.878 2.950 9.821e-03 0.165 -2.706 LOC283501 hypothetical protein LOC283501 13   AA921835 13q34 Hs.666761 1    
201071_x_at -0.305 9.823 -2.950 9.824e-03 0.165 -2.706 SF3B1 splicing factor 3b, subunit 1, 155kDa 2 -197991765, -197964942 NM_012433 2q33.1 Hs.632554 34

nuclear mRNA splicing, via spliceosome

nuclear mRNA splicing, via spliceosome

protein binding

nucleus

spliceosomal complex

RNA splicing

nuclear speck

RNA splicing factor activity, transesterification mechanism

 
212206_s_at -0.552 7.769 -2.949 9.832e-03 0.165 -2.707 H2AFV H2A histone family, member V 7 -44839737, -44833012 BF343852 7p13 Hs.488189 12

nucleosome

DNA binding

nucleus

chromosome

nucleosome assembly

Systemic lupus erythematosus

231810_at 0.375 6.077 2.949 9.834e-03 0.165 -2.707 BRI3BP BRI3 binding protein 12 124044146 BG106919 12q24.31 Hs.596464 5

membrane

integral to membrane

 
214252_s_at 0.406 5.333 2.948 9.848e-03 0.166 -2.708 CLN5 ceroid-lipofuscinosis, neuronal 5 13 76464059 AV700514 13q21.1-q32 Hs.30213 19

protein binding

lysosomal membrane

vacuolar lumen

endoplasmic reticulum

Golgi apparatus

lysosomal lumen acidification

brain development

visual perception

integral to membrane

integral to membrane

neurogenesis

protein catabolic process

neuron maturation

perinuclear region of cytoplasm

Lysosome

218025_s_at 0.375 10.491 2.948 9.848e-03 0.166 -2.708 PECI peroxisomal D3,D2-enoyl-CoA isomerase 6 -4060925 NM_006117 6p24.3 Hs.15250 15

acyl-CoA binding

dodecenoyl-CoA delta-isomerase activity

binding

peroxisome

peroxisomal matrix

fatty acid metabolic process

metabolic process

isomerase activity

Fatty acid metabolism

210105_s_at 0.375 6.759 2.948 9.856e-03 0.166 -2.709 FYN FYN oncogene related to SRC, FGR, YES 6 -112089177, -112089177, -112089177 M14333 6q21 Hs.390567 326

nucleotide binding

glycoprotein binding

non-membrane spanning protein tyrosine kinase activity

ATP binding

endosome

cytosol

plasma membrane

protein amino acid phosphorylation

calcium ion transport

protein kinase cascade

multicellular organismal development

learning

feeding behavior

transferase activity

manganese ion binding

identical protein binding

interspecies interaction between organisms

metal ion binding

T cell receptor signaling pathway

Axon guidance

Focal adhesion

Adherens junction

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

Fc epsilon RI signaling pathway

Prion diseases

Pathogenic Escherichia coli infection - EHEC

226212_s_at -0.487 6.099 -2.947 9.876e-03 0.166 -2.711 INSR insulin receptor 19 -7063265 AV726689 19p13.3-p13.2 Hs.465744 351

nucleotide binding

activation of MAPK activity

positive regulation of protein amino acid phosphorylation

heart morphogenesis

receptor signaling protein tyrosine kinase activity

receptor activity

insulin receptor activity

insulin-like growth factor receptor binding

ATP binding

GTP binding

endosome

microsome

cytosol

plasma membrane

plasma membrane

insulin receptor complex

caveola

carbohydrate metabolic process

G-protein coupled receptor protein signaling pathway

positive regulation of cell proliferation

positive regulation of cell proliferation

insulin receptor signaling pathway

endosome membrane

transferase activity

peptidyl-tyrosine phosphorylation

transformation of host cell by virus

protein phosphatase binding

male sex determination

positive regulation of cell migration

insulin-like growth factor I binding

insulin-like growth factor II binding

activation of protein kinase B activity

regulation of gene-specific transcription

SH2 domain binding

glucose homeostasis

positive regulation of MAPKKK cascade

3-phosphoinositide-dependent protein kinase binding

phosphoinositide 3-kinase binding

insulin binding

insulin receptor substrate binding

positive regulation of nitric oxide biosynthetic process

positive regulation of glycogen biosynthetic process

positive regulation of DNA replication

positive regulation of glycolysis

positive regulation of mitosis

regulation of embryonic development

positive regulation of glucose import

positive regulation of glucose import

protein amino acid autophosphorylation

positive regulation of developmental growth

protein heterotetramerization

PTB domain binding

positive regulation of protein kinase B signaling cascade

positive regulation of respiratory burst

Adherens junction

Insulin signaling pathway

Type II diabetes mellitus

206388_at 0.286 5.122 2.947 9.880e-03 0.166 -2.711 PDE3A phosphodiesterase 3A, cGMP-inhibited 12 20413463 U36798 12p12 Hs.591150 24

oocyte maturation

3',5'-cyclic-AMP phosphodiesterase activity

cGMP-inhibited cyclic-nucleotide phosphodiesterase activity

soluble fraction

insoluble fraction

lipid metabolic process

signal transduction

membrane

hydrolase activity

regulation of meiosis

response to drug

Purine metabolism

Insulin signaling pathway

232553_at 0.247 2.880 2.947 9.886e-03 0.166 -2.712 PCYT1B phosphate cytidylyltransferase 1, choline, beta X -24486125, -24486125 AI857508 Xp22.11 Hs.660708 9

choline-phosphate cytidylyltransferase activity

cytoplasm

endoplasmic reticulum

phosphatidylcholine biosynthetic process

phospholipid biosynthetic process

biosynthetic process

transferase activity

nucleotidyltransferase activity

Aminophosphonate metabolism

Glycerophospholipid metabolism

Metabolic pathways

224160_s_at -0.416 6.763 -2.946 9.891e-03 0.166 -2.712 ACAD9 acyl-Coenzyme A dehydrogenase family, member 9 3 130081022 BC001817 3q21.3 Hs.567482 12

acyl-CoA dehydrogenase activity

mitochondrion

electron carrier activity

FAD binding

oxidation reduction

Geraniol degradation

1- and 2-Methylnaphthalene degradation

225155_at -0.879 11.077 -2.946 9.894e-03 0.166 -2.713 SNHG5 small nucleolar RNA host gene 5 (non-protein coding) 6 -86443443 BG339050 6q14.3 Hs.292457 2    
241705_at -0.566 4.263 -2.946 9.896e-03 0.166 -2.713 ABCA5 ATP-binding cassette, sub-family A (ABC1), member 5 17 -64752170, -64752170 AI568925 17q24.3 Hs.421474 11

nucleotide binding

ATP binding

lysosome

endosome

Golgi apparatus

transport

membrane

integral to membrane

ATPase activity

ABC transporters

201437_s_at -0.375 7.349 -2.946 9.902e-03 0.166 -2.713 EIF4E eukaryotic translation initiation factor 4E 4 -100018629, -100018629 NM_001968 4q21-q25 Hs.249718 143

RNA cap binding

translation initiation factor activity

protein binding

cytoplasm

cytosol

translational initiation

regulation of translation

eukaryotic translation initiation factor 4F complex

interspecies interaction between organisms

mTOR signaling pathway

Insulin signaling pathway

218129_s_at -0.540 6.516 -2.946 9.903e-03 0.166 -2.713 NFYB nuclear transcription factor Y, beta 12 -103034987 NM_006166 12q22-q23 Hs.84928 38

transcription factor activity

protein binding

intracellular

nucleus

CCAAT-binding factor complex

sequence-specific DNA binding

positive regulation of transcription, DNA-dependent

Antigen processing and presentation

211742_s_at 0.280 4.255 2.945 9.923e-03 0.166 -2.715 EVI2B ecotropic viral integration site 2B 17 -26654913 BC005926 17q11.2 Hs.5509 10

cytoplasm

integral to plasma membrane

membrane

 
218231_at 0.310 7.639 2.944 9.931e-03 0.166 -2.716 NAGK N-acetylglucosamine kinase 2 71148915 NM_017567 2p13.3 Hs.7036 17

nucleotide binding

protein binding

ATP binding

soluble fraction

N-acetylglucosamine metabolic process

N-acetylmannosamine metabolic process

N-acylmannosamine kinase activity

kinase activity

transferase activity

N-acetylglucosamine kinase activity

Amino sugar and nucleotide sugar metabolism

1555688_s_at 0.308 5.021 2.944 9.941e-03 0.166 -2.717 SLA2 Src-like-adaptor 2 20 -34674335 AF290986 20q11.23 Hs.713578 8

negative regulation of transcription from RNA polymerase II promoter

SH3/SH2 adaptor activity

cytoplasm

plasma membrane

endosome membrane

B cell mediated immunity

intracellular receptor-mediated signaling pathway

cytoplasmic vesicle

T cell activation

protein N-terminus binding

regulation of immune response

negative regulation of calcium-mediated signaling

antigen receptor-mediated signaling pathway

negative regulation of B cell activation

 
1560648_s_at -0.706 5.408 -2.943 9.950e-03 0.166 -2.718 TSPYL1 TSPY-like 1 6 -116704438 AI625538 6q22-q23 Hs.458358 Hs.486292 11

molecular_function

cellular_component

intracellular

nucleus

nucleolus

nucleosome assembly

biological_process

 
206197_at 0.402 4.221 2.943 9.952e-03 0.166 -2.718 NME5 non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase) 5 -137478759 NM_003551 5q31 Hs.715767 7

nucleoside diphosphate kinase activity

protein binding

ATP binding

cellular_component

GTP biosynthetic process

UTP biosynthetic process

CTP biosynthetic process

anti-apoptosis

multicellular organismal development

spermatid development

nucleoside metabolic process

 
231954_at 0.262 4.190 2.943 9.953e-03 0.166 -2.718 DKFZP434I0714 hypothetical protein DKFZP434I0714 4   AL137273 4q31.23 Hs.142307 1    
1556351_at -0.737 3.388 -2.942 9.971e-03 0.166 -2.720 HCN1 hyperpolarization activated cyclic nucleotide-gated potassium channel 1 5 -45295108 BM682352 5p12 Hs.650434 17

nucleotide binding

voltage-gated ion channel activity

voltage-gated potassium channel activity

sodium channel activity

protein binding

ion transport

potassium ion transport

sodium ion transport

membrane

integral to membrane

axon

dendrite

cAMP binding

potassium ion binding

sodium ion binding

apical protein localization

 
211665_s_at -0.774 5.476 -2.942 9.971e-03 0.166 -2.720 SOS2 son of sevenless homolog 2 (Drosophila) 14 -49653595 L20686 14q21 Hs.291533 20

DNA binding

Rho guanyl-nucleotide exchange factor activity

protein binding

cellular_component

intracellular

regulation of Rho protein signal transduction

regulation of small GTPase mediated signal transduction

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

Dorso-ventral axis formation

Focal adhesion

Gap junction

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Insulin signaling pathway

GnRH signaling pathway

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Endometrial cancer

Glioma

Prostate cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Non-small cell lung cancer

226170_at -0.214 7.317 -2.942 9.975e-03 0.166 -2.720 EYA3 eyes absent homolog 3 (Drosophila) 1 -28173405 AA151838 1p36 Hs.185774 9

magnesium ion binding

protein tyrosine phosphatase activity

protein binding

nucleus

cytoplasm

double-strand break repair

response to DNA damage stimulus

multicellular organismal development

visual perception

metabolic process

anatomical structure morphogenesis

response to ionizing radiation

chromatin modification

histone dephosphorylation

hydrolase activity

regulation of transcription

positive regulation of DNA repair

 
211367_s_at 0.337 3.300 2.942 9.975e-03 0.166 -2.720 CASP1 caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase) 11 -104401446 U13699 11q23 Hs.2490 134

cysteine-type endopeptidase activity

protein binding

intracellular

cytoplasm

proteolysis

signal transduction

peptidase activity

caspase activator activity

regulation of apoptosis

positive regulation of I-kappaB kinase/NF-kappaB cascade

Amyotrophic lateral sclerosis (ALS)

225477_s_at -0.369 7.335 -2.942 9.976e-03 0.166 -2.720 NR2C2 nuclear receptor subfamily 2, group C, member 2 3 14964239 AL138444 3p25 Hs.555973 22

transcription factor activity

steroid hormone receptor activity

transcription coactivator activity

nucleus

nucleolus

regulation of transcription, DNA-dependent

nervous system development

zinc ion binding

sequence-specific DNA binding

metal ion binding

spermatocyte division

 
212382_at 0.704 7.361 2.942 9.979e-03 0.166 -2.720 TCF4 transcription factor 4 18 -51040559 BF433429 18q21.1 Hs.605153 55

transcription factor activity

protein binding

nucleus

regulation of transcription

positive regulation of transcription, DNA-dependent

protein heterodimerization activity

 
223544_at 0.310 4.705 2.942 9.981e-03 0.166 -2.721 TMEM79 transmembrane protein 79 1 154519327, 154520693 BC005094 1q22 Hs.347408 6

membrane

integral to membrane

 
230025_at 0.323 5.927 2.942 9.982e-03 0.166 -2.721 GJD3 gap junction protein, delta 3, 31.9kDa 17 -35770430 BF508941 17q21.2 Hs.444663 8

protein binding

plasma membrane

integral to plasma membrane

connexon complex

cell communication

cell surface

gap junction assembly

cell junction

 
213231_at 0.231 4.142 2.942 9.982e-03 0.166 -2.721 DMWD dystrophia myotonica, WD repeat containing 19 -50978103 L19267 19q13.3 Hs.515474 13

molecular_function

cellular_component

meiosis

 
202202_s_at 0.704 6.238 2.942 9.982e-03 0.166 -2.721 LAMA4 laminin, alpha 4 6 -112681678, -112535826 NM_002290 6q21 Hs.654572 32

receptor binding

extracellular matrix structural constituent

extracellular region

basal lamina

laminin-1 complex

regulation of cell adhesion

regulation of cell migration

regulation of embryonic development

Focal adhesion

ECM-receptor interaction

Pathways in cancer

Small cell lung cancer

223257_at -0.476 4.248 -2.942 9.983e-03 0.166 -2.721 G2E3 G2/M-phase specific E3 ubiquitin ligase 14 30098079 AI823905 14q12 Hs.509008 Hs.605081 13

protein polyubiquitination

blastocyst development

ubiquitin-protein ligase activity

protein binding

intracellular

nucleus

nucleolus

cytoplasm

Golgi apparatus

protein modification process

multicellular organismal development

zinc ion binding

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

negative regulation of apoptosis

metal ion binding

 
1554892_a_at 0.267 3.218 2.941 9.992e-03 0.166 -2.722 MS4A3 membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific) 11 59580676 AY095480 11q12.1 Hs.99960 7

receptor activity

protein binding

cytoplasm

signal transduction

membrane

integral to membrane

perinuclear region of cytoplasm

 
215992_s_at -0.305 4.153 -2.941 9.992e-03 0.166 -2.722 RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 4 160408447 AL117397 4q32.1 Hs.113912 14

MAPKKK cascade

signal transducer activity

guanyl-nucleotide exchange factor activity

calcium ion binding

protein binding

intracellular

plasma membrane

integral to plasma membrane

Rap guanyl-nucleotide exchange factor activity

cAMP-mediated signaling

diacylglycerol binding

Rap GTPase activator activity

regulation of small GTPase mediated signal transduction

MAPK signaling pathway

221845_s_at 0.463 5.878 2.941 9.994e-03 0.166 -2.722 CLPB ClpB caseinolytic peptidase B homolog (E. coli) 11 -71681117 AI655698 11q13.4 Hs.523877 9

nucleotide binding

molecular_function

ATP binding

cellular_component

nucleoside-triphosphatase activity

cellular response to heat

 
211597_s_at 0.416 7.451 2.941 1.001e-02 0.166 -2.723 HOPX HOP homeobox 4 -57208910, -57208910 AB059408 4q11-q12 Hs.654864 25

negative regulation of transcription from RNA polymerase II promoter

trophectodermal cell differentiation

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

heart development

regulation of heart contraction

transcription repressor activity

histone deacetylation

positive regulation of skeletal muscle regeneration

sequence-specific DNA binding

negative regulation of cell differentiation

lung alveolus development

positive regulation of striated muscle cell differentiation

 
219924_s_at 0.400 5.930 2.940 1.001e-02 0.166 -2.723 ZMYM6 zinc finger, MYM-type 6 1 -35224353 NM_007167 1p34.2 Hs.533986 Hs.623978 Hs.675613 8

DNA binding

nucleus

nucleolus

multicellular organismal development

zinc ion binding

metal ion binding

 
227291_s_at 0.492 10.617 2.940 1.001e-02 0.166 -2.723 BOLA3 bolA homolog 3 (E. coli) 2 -74216035 AI380704 2p13.1 Hs.61472 4

molecular_function

cellular_component

biological_process

 
231780_at 0.232 5.241 2.940 1.002e-02 0.166 -2.724 GBGT1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 9 -135018160 AI627912 9q34.13-q34.3 Hs.495419 8

Golgi apparatus

carbohydrate metabolic process

glycolipid biosynthetic process

membrane

integral to membrane

transferase activity, transferring hexosyl groups

manganese ion binding

metal ion binding

Glycosphingolipid biosynthesis - globo series

Metabolic pathways

209677_at -0.487 3.387 -2.940 1.002e-02 0.166 -2.724 PRKCI protein kinase C, iota 3 171422913 L18964 3q26.3 Hs.478199 91

polarisome

nucleotide binding

protein kinase C activity

protein binding

ATP binding

phospholipid binding

nucleus

cytoplasm

endosome

cytosol

protein amino acid phosphorylation

protein targeting to membrane

cytoskeleton organization

actin filament organization

intracellular signaling cascade

zinc ion binding

membrane

membrane organization

vesicle-mediated transport

apical plasma membrane

transferase activity

diacylglycerol binding

cellular response to insulin stimulus

establishment of apical/basal cell polarity

eye photoreceptor cell development

establishment or maintenance of epithelial cell apical/basal polarity

cell-cell junction organization

positive regulation of glucose import

metal ion binding

secretion

Golgi vesicle budding

regulation of establishment of protein localization

Endocytosis

Tight junction

Insulin signaling pathway

224252_s_at 0.289 5.741 2.940 1.002e-02 0.166 -2.724 FXYD5 FXYD domain containing ion transport regulator 5 19 40337466 AF177940 19q12-q13.1 Hs.333418 20

actin binding

ion channel activity

ion transport

membrane

integral to membrane

microvillus assembly

cadherin binding

negative regulation of calcium-dependent cell-cell adhesion

 
207925_at 0.284 4.562 2.940 1.002e-02 0.166 -2.724 CST5 cystatin D 20 -23804571 NM_001900 20p11.21 Hs.121489 16

cysteine-type endopeptidase inhibitor activity

protein binding

extracellular region

peptidase inhibitor activity

 
202763_at -0.424 5.490 -2.940 1.002e-02 0.166 -2.725 CASP3 caspase 3, apoptosis-related cysteine peptidase 4 -185785843 NM_004346 4q34 Hs.141125 552

B cell homeostasis

release of cytochrome c from mitochondria

cysteine-type endopeptidase activity

cyclin-dependent protein kinase inhibitor activity

protein binding

nucleus

nucleoplasm

nucleolus

cytoplasm

mitochondrion

cytosol

cytosol

plasma membrane

DNA fragmentation involved in apoptosis

proteolysis

response to DNA damage stimulus

heart development

sensory perception of sound

peptidase activity

induction of apoptosis via death domain receptors

induction of apoptosis by oxidative stress

response to UV

response to wounding

keratinocyte differentiation

nuclear fragmentation during apoptosis

negative regulation of B cell proliferation

response to tumor necrosis factor

T cell homeostasis

negative regulation of apoptosis

cell fate commitment

negative regulation of cyclin-dependent protein kinase activity

negative regulation of activated T cell proliferation

neuron apoptosis

MAPK signaling pathway

p53 signaling pathway

Apoptosis

Natural killer cell mediated cytotoxicity

Alzheimer's disease

Parkinson's disease

Amyotrophic lateral sclerosis (ALS)

Huntington's disease

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Colorectal cancer

210113_s_at 0.287 5.246 2.939 1.003e-02 0.166 -2.725 NLRP1 NLR family, pyrin domain containing 1 17 -5358161, -5345442 AF310105 17p13.2 Hs.652273 31

nucleotide binding

ATP binding

intracellular

nucleus

cytoplasm

induction of apoptosis

activation of caspase activity

defense response

caspase activator activity

enzyme binding

protein domain specific binding

regulation of apoptosis

neuron apoptosis

 
202443_x_at 0.374 7.230 2.939 1.003e-02 0.166 -2.725 NOTCH2 Notch homolog 2 (Drosophila) 1 -120255698 AA291203 1p13-p11 Hs.487360 73

cell fate determination

ligand-regulated transcription factor activity

receptor activity

calcium ion binding

protein binding

protein binding

nucleus

plasma membrane

integral to plasma membrane

regulation of transcription, DNA-dependent

anti-apoptosis

induction of apoptosis

cell cycle arrest

Notch signaling pathway

multicellular organismal development

nervous system development

negative regulation of cell proliferation

organ morphogenesis

cell surface

cell growth

stem cell maintenance

hemopoiesis

cell differentiation

positive regulation of Ras protein signal transduction

protein heterodimerization activity

regulation of developmental process

Dorso-ventral axis formation

Notch signaling pathway

222291_at 0.423 4.141 2.939 1.003e-02 0.166 -2.725 FAM149A family with sequence similarity 149, member A 4 187302988, 187307320 AI478795 4q35.1 Hs.357025 3    
209452_s_at 0.334 8.936 2.939 1.004e-02 0.166 -2.726 VTI1B vesicle transport through interaction with t-SNAREs homolog 1B (yeast) 14 -67187618 AF035824 14q24.1 Hs.226007 18

protein binding

Golgi apparatus

intracellular protein transport

vesicle docking during exocytosis

membrane fusion

cell proliferation

membrane

integral to membrane

vesicle-mediated transport

SNARE interactions in vesicular transport

223195_s_at 0.787 6.402 2.939 1.004e-02 0.166 -2.726 SESN2 sestrin 2 1 28458592 BF131886 1p35.3 Hs.469543 8

nucleus

cytoplasm

cell cycle arrest

p53 signaling pathway

208430_s_at -0.831 6.117 -2.939 1.004e-02 0.166 -2.726 DTNA dystrobrevin, alpha 18 30327251, 30327251, 30327251, 30427279, 30544193, 30589937, 30589937, 30652299, 30652299 NM_001390 18q12 Hs.643454 38

calcium ion binding

protein binding

cytoplasm

striated muscle contraction

signal transduction

neuromuscular synaptic transmission

zinc ion binding

cell junction

synapse

 
203632_s_at -0.303 7.897 -2.938 1.006e-02 0.166 -2.727 GPRC5B G protein-coupled receptor, family C, group 5, member B 16 -19777793 NM_016235 16p12 Hs.148685 8

receptor activity

G-protein coupled receptor activity

nucleus

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

integral to membrane

cytoplasmic vesicle

 
204971_at 1.035 3.603 2.938 1.006e-02 0.166 -2.728 CSTA cystatin A (stefin A) 3 123526700 NM_005213 3q21 Hs.518198 45

cornified envelope

protease binding

cysteine-type endopeptidase inhibitor activity

structural molecule activity

intracellular

nucleus

cytoplasm

negative regulation of peptidase activity

peptide cross-linking

keratinocyte differentiation

protein binding, bridging

 
239937_at -0.407 5.690 -2.935 1.012e-02 0.167 -2.734 ZNF207 zinc finger protein 207 17 27701269 AI860558 17q11.2 Hs.500775 7

transcription factor activity

intracellular

nucleus

nucleolus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
201709_s_at 0.300 5.956 2.935 1.013e-02 0.167 -2.734 NIPSNAP1 nipsnap homolog 1 (C. elegans) 22 -28280797 NM_003634 22q12.2 Hs.173878 9

mitochondrion

mitochondrial inner membrane

 
222156_x_at -0.447 6.792 -2.935 1.013e-02 0.167 -2.734 CCPG1 cell cycle progression 1 15 -53434729, -53434729 AK022459 15q21.1 Hs.285051 5

cell cycle

membrane

integral to membrane

 
223421_at 0.249 6.727 2.935 1.013e-02 0.167 -2.734 CYHR1 cysteine/histidine-rich 1 8 -145660007, -145660007, -145646122 BC005073 8q24.3 Hs.459379 Hs.598583 5

protein binding

nuclear envelope

cytoplasm

zinc ion binding

metal ion binding

perinuclear region of cytoplasm

 
211330_s_at 0.267 4.123 2.934 1.013e-02 0.167 -2.735 HFE hemochromatosis 6 26195487 AF144242 6p21.3 Hs.233325 592

antigen processing and presentation of peptide antigen via MHC class I

iron ion binding

protein binding

cytoplasm

early endosome

plasma membrane

integral to plasma membrane

protein complex assembly

ion transport

iron ion transport

cellular iron ion homeostasis

receptor-mediated endocytosis

immune response

antigen processing and presentation

cytoplasmic vesicle

MHC class I protein complex

apical part of cell

basal part of cell

perinuclear region of cytoplasm

recycling endosome

 
222984_at -0.258 10.826 -2.934 1.014e-02 0.167 -2.735 PAIP2 poly(A) binding protein interacting protein 2 5 138705417, 138706032 AF151052 5q31.2 Hs.396644 16

protein binding

cytoplasm

regulation of translation

translation repressor activity

negative regulation of translational initiation

 
215082_at 0.310 5.535 2.934 1.014e-02 0.167 -2.735 ELOVL5 ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast) 6 -53240154 BF973387 6p21.1-p12.1 Hs.713560 11

endoplasmic reticulum

fatty acid biosynthetic process

membrane

integral to membrane

Biosynthesis of unsaturated fatty acids

226154_at 0.368 9.790 2.934 1.015e-02 0.167 -2.736 DNM1L dynamin 1-like 12 32723403 AL043631 12p11.21 Hs.556296 34

nucleotide binding

GTPase activity

protein binding

GTP binding

cytoplasm

endoplasmic reticulum

cis-Golgi network

cytosol

mitochondrial membrane organization

cell communication

multicellular organismal development

membrane

hydrolase activity

mitochondrial fragmentation during apoptosis

Endocytosis

Fc gamma R-mediated phagocytosis

203836_s_at 0.499 6.368 2.934 1.015e-02 0.167 -2.736 MAP3K5 mitogen-activated protein kinase kinase kinase 5 6 -136919879 D84476 6q22.33 Hs.186486 108

MAPKKK cascade

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

ATP binding

protein amino acid phosphorylation

apoptosis

activation of JUN kinase activity

induction of apoptosis by extracellular signals

caspase activator activity

transferase activity

protein homodimerization activity

interspecies interaction between organisms

MAPK signaling pathway

Neurotrophin signaling pathway

Amyotrophic lateral sclerosis (ALS)

219971_at 0.241 4.230 2.933 1.016e-02 0.167 -2.737 IL21R interleukin 21 receptor 16 27321223, 27321923, 27346079 NM_021798 16p11 Hs.210546 21

interleukin-21 receptor activity

receptor activity

membrane

integral to membrane

natural killer cell activation

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

63009_at 0.237 6.412 2.933 1.016e-02 0.167 -2.737 SHQ1 SHQ1 homolog (S. cerevisiae) 3 -72881117 AI188402 3p13 Hs.606584 2    
229603_at 0.522 3.196 2.933 1.016e-02 0.167 -2.737 BBS12 Bardet-Biedl syndrome 12 4 123873306 AA971753 4q27 Hs.400698 4

protein binding

ATP binding

cellular protein metabolic process

 
226552_at 0.300 5.733 2.933 1.016e-02 0.167 -2.737 IER5L immediate early response 5-like 9 -130977651 BF110608 9q34.11 Hs.529857 4    
228384_s_at 0.742 5.810 2.933 1.016e-02 0.167 -2.737 PYROXD2 pyridine nucleotide-disulphide oxidoreductase domain 2 10 -100133312 AI690274 10q24.2 Hs.238303 Hs.676105 6

oxidoreductase activity

oxidation reduction

 
217071_s_at 0.255 5.981 2.933 1.017e-02 0.167 -2.738 MTHFR 5,10-methylenetetrahydrofolate reductase (NADPH) 1 -11768373 AJ249275 1p36.3 Hs.214142 1776

methylenetetrahydrofolate reductase (NADPH) activity

methylenetetrahydrofolate reductase (NADPH) activity

protein binding

cytosol

cellular amino acid metabolic process

methionine metabolic process

blood circulation

oxidoreductase activity

oxidation reduction

One carbon pool by folate

Methane metabolism

Metabolic pathways

213151_s_at -0.321 9.516 -2.933 1.017e-02 0.167 -2.738 SEPT7 septin 7 7 35807151 AU157515 7p14.3-p14.1 Hs.191346 Hs.642540 23

nucleotide binding

condensed chromosome kinetochore

cytokinesis

stress fiber

structural molecule activity

protein binding

GTP binding

nucleus

cytoplasm

spindle

cell cycle

mitosis

septin complex

protein heterooligomerization

 
211250_s_at 0.252 5.775 2.933 1.017e-02 0.167 -2.738 SH3BP2 SH3-domain binding protein 2 4 2764547, 2783743, 2789709, 2790338 AB000463 4p16.3 Hs.167679 34

SH3/SH2 adaptor activity

protein binding

signal transduction

SH3 domain binding

Natural killer cell mediated cytotoxicity

222484_s_at 0.723 8.550 2.932 1.019e-02 0.167 -2.739 CXCL14 chemokine (C-X-C motif) ligand 14 5 -134934267 AF144103 5q31 Hs.483444 32

extracellular region

extracellular space

Golgi apparatus

chemotaxis

immune response

signal transduction

cell-cell signaling

chemokine activity

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

1555266_a_at 0.258 4.036 2.932 1.019e-02 0.167 -2.739 ASXL2 additional sex combs like 2 (Drosophila) 2 -25815756 BC042999 2p24.1 Hs.594386 6

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
221787_at -0.479 6.883 -2.931 1.019e-02 0.167 -2.740 C6orf120 chromosome 6 open reading frame 120 6 169844181 BF431618 6q27 Hs.591375 Hs.694601 4

extracellular region

 
229594_at -0.361 6.287 -2.931 1.020e-02 0.167 -2.740 SPTY2D1 SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) 11 -18584523 AI890299 11p15.1 Hs.268668 Hs.719399 2    
218124_at 0.491 7.112 2.931 1.020e-02 0.167 -2.741 RETSAT retinol saturase (all-trans-retinol 13,14-reductase) 2 -85422589 NM_017750 2p11.2 Hs.440401 11

nuclear outer membrane

endoplasmic reticulum

endoplasmic reticulum membrane

electron carrier activity

membrane

oxidoreductase activity

retinol metabolic process

all-trans-retinol 13,14-reductase activity

oxidation reduction

Retinol metabolism

201489_at 0.481 9.307 2.931 1.020e-02 0.167 -2.741 PPIF peptidylprolyl isomerase F 10 80777225 BC005020 10q22-q23 Hs.381072 13

peptidyl-prolyl cis-trans isomerase activity

membrane fraction

mitochondrion

mitochondrial matrix

protein folding

isomerase activity

peptide binding

 
217810_x_at -0.324 8.383 -2.931 1.021e-02 0.167 -2.742 LARS leucyl-tRNA synthetase 5 -145472781 NM_020117 5q32 Hs.432674 20

nucleotide binding

leucine-tRNA ligase activity

ATP binding

cytoplasm

leucyl-tRNA aminoacylation

ligase activity

Valine, leucine and isoleucine biosynthesis

Aminoacyl-tRNA biosynthesis

217595_at -0.263 2.713 -2.930 1.023e-02 0.168 -2.743 GSPT1 G1 to S phase transition 1 16 -11869485, -11869485 AV701723 16p13.1 Hs.528780 27

G1/S transition of mitotic cell cycle

nucleotide binding

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

translation release factor activity

GTPase activity

protein binding

GTP binding

intracellular

translation

protein amino acid methylation

 
209340_at -0.558 8.112 -2.929 1.025e-02 0.168 -2.745 UAP1 UDP-N-acteylglucosamine pyrophosphorylase 1 1 160797919 S73498 1q23.3 Hs.492859 10

UDP-N-acetylglucosamine diphosphorylase activity

nucleus

nucleolus

cytoplasm

UDP-N-acetylglucosamine biosynthetic process

metabolic process

transferase activity

nucleotidyltransferase activity

Amino sugar and nucleotide sugar metabolism

Metabolic pathways

230612_at 0.294 4.758 2.929 1.025e-02 0.168 -2.745 WDR73 WD repeat domain 73 15 -82987014 AI264119 15q25.2 Hs.719288 3    
217594_at -0.404 3.949 -2.928 1.027e-02 0.168 -2.747 ZCCHC11 zinc finger, CCHC domain containing 11 1 -52661535 R25849 1p32.3 Hs.655407 7

nucleic acid binding

protein binding

intracellular

nucleus

cytoplasm

zinc ion binding

nucleotidyltransferase activity

metal ion binding

 
211767_at 0.250 4.446 2.927 1.028e-02 0.168 -2.748 GINS4 GINS complex subunit 4 (Sld5 homolog) 8 41505881 BC005995 8p11.21 Hs.656996 4

protein binding

nucleus

cytoplasm

DNA replication

 
217548_at 0.274 4.497 2.927 1.029e-02 0.168 -2.749 LOC100129502 hypothetical protein LOC100129502 15   AA491625 15q26.1 Hs.709285 1    
219017_at 0.448 4.987 2.927 1.030e-02 0.168 -2.749 ETNK1 ethanolamine kinase 1 12 22669342, 22669342 NM_018638 12p12.1 Hs.29464 4

nucleotide binding

ethanolamine kinase activity

ATP binding

cytoplasm

phosphatidylethanolamine biosynthetic process

transferase activity

Glycerophospholipid metabolism

Metabolic pathways

1561985_at -0.590 4.564 -2.927 1.030e-02 0.168 -2.749 C14orf39 chromosome 14 open reading frame 39 14 -59972426 AL832219 14q23.1 Hs.335754 3

molecular_function

cellular_component

multicellular organismal development

regulation of transcription factor activity

 
224823_at 1.003 7.388 2.926 1.031e-02 0.168 -2.750 MYLK myosin light chain kinase 3 -124813832, -124813832 AA526844 3q21 Hs.477375 56

nucleotide binding

magnesium ion binding

actin binding

myosin light chain kinase activity

calcium ion binding

calmodulin binding

ATP binding

protein amino acid phosphorylation

transferase activity

Calcium signaling pathway

Vascular smooth muscle contraction

Focal adhesion

Regulation of actin cytoskeleton

1565716_at 0.408 5.339 2.926 1.031e-02 0.168 -2.750 FUS fusion (involved in t(12;16) in malignant liposarcoma) 16 31098953 BE930017 16p11.2 Hs.513522 55

nuclear mRNA splicing, via spliceosome

DNA binding

RNA binding

protein binding

intracellular

nucleus

nucleolus

cell death

zinc ion binding

metal ion binding

 
212622_at -0.418 7.450 -2.926 1.031e-02 0.168 -2.751 TMEM41B transmembrane protein 41B 11 -9258777 N64760 11p15.4 Hs.594563 4

membrane

integral to membrane

 
227396_at 0.579 5.515 2.926 1.032e-02 0.168 -2.751 PTPRJ protein tyrosine phosphatase, receptor type, J 11 47958685, 47958685 AI631833 11p11.2 Hs.318547 36

transmembrane receptor protein tyrosine phosphatase activity

protein binding

nucleus

plasma membrane

integral to plasma membrane

protein amino acid dephosphorylation

transmembrane receptor protein tyrosine kinase signaling pathway

cell-cell signaling

hydrolase activity

cell junction

Adherens junction

225057_at -0.436 7.770 -2.925 1.033e-02 0.169 -2.752 SLC15A4 solute carrier family 15, member 4 12 -127843692 AI636759 12q24.32-q24.33 Hs.507260 Hs.699387 6

transporter activity

oligopeptide transport

protein transport

symporter activity

membrane

integral to membrane

 
203332_s_at 0.261 5.726 2.924 1.035e-02 0.169 -2.754 INPP5D inositol polyphosphate-5-phosphatase, 145kDa 2 233633279 NM_005541 2q37.1 Hs.262886 Hs.601911 57

inositol or phosphatidylinositol phosphatase activity

inositol-polyphosphate 5-phosphatase activity

protein binding

cytoplasm

cytosol

phosphate metabolic process

apoptosis

immune response

signal transduction

membrane

hydrolase activity

SH3 domain binding

Phosphatidylinositol signaling system

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Insulin signaling pathway

1556573_s_at -0.229 4.715 -2.924 1.036e-02 0.169 -2.755 LOC286178 hypothetical protein LOC286178 8   AK090741 8q12.1 Hs.255156 1    
207243_s_at -0.475 11.436 -2.924 1.036e-02 0.169 -2.755 CALM2 calmodulin 2 (phosphorylase kinase, delta) 2 -47240725 NM_001743 2p21 Hs.468442 52  

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Glioma

1553371_at 0.281 4.020 2.924 1.036e-02 0.169 -2.755 EPHA10 EPH receptor A10 1 -37998531, -37954232 NM_173641 1p34.3 Hs.129435 5

nucleotide binding

receptor activity

ephrin receptor activity

ATP binding

extracellular region

plasma membrane

protein amino acid phosphorylation

transmembrane receptor protein tyrosine kinase signaling pathway

integral to membrane

transferase activity

 
204927_at 0.186 6.532 2.923 1.037e-02 0.169 -2.755 RASSF7 Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 11 550970, 551449 NM_003475 11p15.5 Hs.72925 9

DNA binding

protein binding

nucleus

regulation of transcription, DNA-dependent

signal transduction

 
210878_s_at -0.380 8.178 -2.923 1.037e-02 0.169 -2.756 KDM3B lysine (K)-specific demethylase 3B 5 137716183 BC001202 5q31 Hs.714832 14

iron ion binding

nucleus

nucleolus

zinc ion binding

oxidoreductase activity

chromatin modification

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

regulation of transcription

metal ion binding

oxidation reduction

 
230925_at 0.488 4.932 2.922 1.039e-02 0.169 -2.757 APBB1IP amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein 10 26767271 AI093231 10p12.1 Hs.310421 9

cytoplasm

cytoskeleton

plasma membrane

focal adhesion

signal transduction

lamellipodium

cell junction

 
224483_s_at 0.244 3.129 2.922 1.039e-02 0.169 -2.758 MFSD9 major facilitator superfamily domain containing 9 2 -102700097 BC006242 2q12.1 Hs.590898 3

transport

tetracycline:hydrogen antiporter activity

tetracycline transport

membrane

integral to membrane

response to antibiotic

 
224827_at -0.480 6.243 -2.922 1.040e-02 0.169 -2.759 UBTD2 ubiquitin domain containing 2 5 -171569254 AK022894 5q35.1 Hs.131570 Hs.716824 7

cytoplasm

 
204974_at 0.374 5.940 2.921 1.041e-02 0.169 -2.759 RAB3A RAB3A, member RAS oncogene family 19 -18168610 AA988241 19p13.2 Hs.27744 46

nucleotide binding

respiratory system process

GTPase activity

protein binding

protein binding

GTP binding

plasma membrane

mitochondrion organization

small GTPase mediated signal transduction

neuromuscular synaptic transmission

axonogenesis

synaptic vesicle

post-embryonic development

protein transport

synaptic vesicle exocytosis

synaptic vesicle maturation

lung development

regulation of synaptic vesicle fusion to presynaptic membrane

maintenance of presynaptic active zone structure

sensory perception of touch

response to electrical stimulus

 
227622_at 0.517 8.053 2.921 1.041e-02 0.169 -2.759 PCF11 PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae) 11 82545784 AW118175 11q13 Hs.128959 10

nuclear mRNA splicing, via spliceosome

nucleus

mRNA cleavage factor complex

mRNA cleavage

 
214711_at -0.549 4.818 -2.921 1.041e-02 0.169 -2.759 GATC glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial) 12 119368666 BE568184 12q24.31 Hs.369624 4

molecular_function

cellular_component

regulation of translational fidelity

biological_process

 
229877_at 0.224 2.554 2.921 1.042e-02 0.169 -2.760 NEO1 neogenin homolog 1 (chicken) 15 71131927 BF058828 15q22.3-q23 Hs.388613 17

protein binding

plasma membrane

integral to plasma membrane

cell adhesion

Cell adhesion molecules (CAMs)

210705_s_at 0.354 4.298 2.920 1.043e-02 0.169 -2.761 TRIM5 tripartite motif-containing 5 11 -5642928, -5641368, -5641363 AF220028 11p15 Hs.370515 55

cytoplasmic mRNA processing body

protein binding

intracellular

cytoplasm

zinc ion binding

response to virus

ligase activity

modification-dependent protein catabolic process

protein homodimerization activity

interspecies interaction between organisms

metal ion binding

 
226493_at -0.555 6.780 -2.919 1.045e-02 0.169 -2.763 KCTD18 potassium channel tetramerisation domain containing 18 2 -201061928 AI627249 2q33.1 Hs.605775 4

voltage-gated potassium channel activity

protein binding

potassium ion transport

voltage-gated potassium channel complex

membrane

 
209379_s_at -0.461 8.617 -2.919 1.045e-02 0.169 -2.763 FAM190B family with sequence similarity 190, member B 10 86078389 AF241785 10q23.1 Hs.461988 5    
210154_at 0.548 6.228 2.919 1.045e-02 0.169 -2.763 ME2 malic enzyme 2, NAD(+)-dependent, mitochondrial 18 46659432 M55905 18q21 6p25-p24 Hs.233119 24

malate dehydrogenase (decarboxylating) activity

binding

mitochondrion

mitochondrial matrix

malate metabolic process

electron carrier activity

oxidoreductase activity

malate dehydrogenase (oxaloacetate-decarboxylating) activity

metal ion binding

NAD or NADH binding

oxidation reduction

Pyruvate metabolism

Biosynthesis of phenylpropanoids

Biosynthesis of alkaloids derived from terpenoid and polyketide

1561504_s_at -2.326 7.634 -2.919 1.046e-02 0.169 -2.763 MYLK4 myosin light chain kinase family, member 4 6 -2608861 AK096893 6p25.2 Hs.127830 4

nucleotide binding

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

transferase activity

 
235114_x_at -0.402 3.985 -2.919 1.047e-02 0.169 -2.764 HOOK3 hook homolog 3 (Drosophila) 8 42871189 N67300 8p11.21 Hs.162852 13

cytoplasm

Golgi apparatus

cis-Golgi network

cytoskeleton

microtubule

endosome organization

lysosome organization

microtubule binding

endosome to lysosome transport

protein transport

HOPS complex

cytoplasmic microtubule organization

identical protein binding

early endosome to late endosome transport

Golgi localization

FHF complex

 
202588_at -0.324 8.800 -2.918 1.047e-02 0.169 -2.764 AK1 adenylate kinase 1 9 -129668579 NM_000476 9q34.1 Hs.175473 24

nucleotide binding

adenylate kinase activity

protein binding

ATP binding

nucleus

cytoplasm

mitochondrion

cytosol

plasma membrane

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

cell cycle arrest

transferase activity

nucleoside kinase activity

ATP metabolic process

Purine metabolism

Metabolic pathways

224195_at -0.366 3.202 -2.918 1.048e-02 0.170 -2.765 TTTY12 testis-specific transcript, Y-linked 12 (non-protein coding) Y 7732964 AF332241 Yp11.2 Hs.667616 1    
37145_at 0.444 4.501 2.918 1.048e-02 0.170 -2.765 GNLY granulysin 2 85774924 M85276 2p11.2 Hs.105806 36

extracellular region

extracellular space

xenobiotic metabolic process

cellular defense response

defense response to bacterium

defense response to fungus

 
230493_at -1.197 6.598 -2.918 1.049e-02 0.170 -2.766 SHISA2 shisa homolog 2 (Xenopus laevis) 13 -25516734 AW664964 13q12.13 Hs.433791 4

endoplasmic reticulum

multicellular organismal development

membrane

integral to membrane

 
227569_at -0.413 6.493 -2.918 1.049e-02 0.170 -2.766 LNX2 ligand of numb-protein X 2 13 -27018049 AU151331 13q12.2 Hs.132359 6

protein binding

zinc ion binding

PDZ domain binding

metal ion binding

protein homooligomerization

 
225070_at -0.331 5.704 -2.917 1.049e-02 0.170 -2.766 NUS1 nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) 6 118103309 BF112132 6q22.1 Hs.289008 6

angiogenesis

molecular_function

receptor activity

cellular_component

multicellular organismal development

biological_process

membrane

integral to membrane

transferase activity, transferring alkyl or aryl (other than methyl) groups

cell differentiation

 
219778_at -0.703 7.658 -2.917 1.051e-02 0.170 -2.767 ZFPM2 zinc finger protein, multitype 2 8 106400322 NM_012082 8q23 Hs.431009 16

negative regulation of transcription from RNA polymerase II promoter

vasculogenesis

in utero embryonic development

DNA binding

RNA polymerase II transcription factor activity

transcription corepressor activity

intracellular

nucleus

cytoplasm

transcription factor binding

zinc ion binding

lung development

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

embryonic organ development

cardiac muscle tissue development

 
227649_s_at 0.225 5.412 2.917 1.051e-02 0.170 -2.768 SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 1 204582822, 204582822 AU144000 1q32.1 Hs.497575 7

GTPase activator activity

intracellular

signal transduction

Axon guidance

203412_at 0.279 6.218 2.917 1.051e-02 0.170 -2.768 LZTR1 leucine-zipper-like transcription regulator 1 22 19666557 NM_006767 22q11.1-q11.2 22q11.21 Hs.78788 10

transcription factor activity

protein binding

anatomical structure morphogenesis

 
218970_s_at -0.443 10.917 -2.916 1.052e-02 0.170 -2.769 CUTC cutC copper transporter homolog (E. coli) 10 101481947 NM_015960 10q24.2 Hs.16606 10

copper ion binding

nucleus

cytoplasm

copper ion transport

copper ion homeostasis

 
220952_s_at 0.542 4.968 2.916 1.053e-02 0.170 -2.770 PLEKHA5 pleckstrin homology domain containing, family A member 5 12 19173914, 19173914, 19249525 NM_019012 12p12 Hs.188614 13

protein binding

phosphatidylinositol binding

cellular_component

biological_process

 
244115_at -0.339 3.724 -2.915 1.053e-02 0.170 -2.770 FAM126A family with sequence similarity 126, member A 7 -22947402 AA608855 7p15.3 Hs.85603 9

signal transducer activity

cellular_component

cytoplasm

biological_process

membrane

 
206685_at 0.246 3.409 2.915 1.054e-02 0.170 -2.770 HCG4 HLA complex group 4 6 -29866787, -1211427, -1013559 NM_018985 6p21.3 Hs.660431 2    
213071_at 0.698 7.195 2.915 1.054e-02 0.170 -2.770 DPT dermatopontin 1 -166931329 AL049798 1q12-q23 Hs.80552 13

protein binding

extracellular region

proteinaceous extracellular matrix

cell adhesion

negative regulation of cell proliferation

collagen fibril organization

 
229121_at 0.248 5.331 2.915 1.054e-02 0.170 -2.771 CMKLR1 chemokine-like receptor 1 12 -107205951, -107205951 BE857553 12q24.1 Hs.197143 14

skeletal system development

receptor activity

G-protein coupled receptor activity

chemokine receptor activity

plasma membrane

integral to plasma membrane

chemotaxis

immune response

signal transduction

G-protein coupled receptor protein signaling pathway

 
203137_at -0.395 8.932 -2.915 1.054e-02 0.170 -2.771 WTAP Wilms tumor 1 associated protein 6 160068141, 160068141, 160068609 NM_004906 6q25-q27 Hs.446091 Hs.710715 16

nucleus

nucleolus

mRNA processing

cell cycle

RNA splicing

nuclear membrane

 
209488_s_at 0.477 4.861 2.915 1.055e-02 0.170 -2.771 RBPMS RNA binding protein with multiple splicing 8 30361485, 30361485 D84109 8p12-p11 Hs.334587 8

nucleotide binding

RNA binding

protein binding

RNA processing

 
213574_s_at -0.409 8.607 -2.914 1.056e-02 0.170 -2.772 KPNB1 karyopherin (importin) beta 1 17 43082273 AA861608 17q21.32 Hs.532793 Hs.706168 113

protein import into nucleus, docking

protein import into nucleus, translocation

nucleus

nuclear pore

nucleoplasm

cytoplasm

cytosol

NLS-bearing substrate import into nucleus

ribosomal protein import into nucleus

nuclear localization sequence binding

zinc ion binding

protein transporter activity

protein domain specific binding

interspecies interaction between organisms

 
208623_s_at 0.898 6.073 2.914 1.056e-02 0.170 -2.773 EZR ezrin 6 -159106760, -159106760 J05021 6q25.2-q26 Hs.487027 158

ruffle

cytoplasm

cytosol

actin filament

plasma membrane

microvillus

cell cortex

cytoskeletal anchoring at plasma membrane

leukocyte adhesion

cytoskeletal protein binding

regulation of cell shape

extrinsic to membrane

membrane to membrane docking

filopodium

cortical cytoskeleton

apical part of cell

cell adhesion molecule binding

actin filament binding

actin filament bundle formation

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Pathogenic Escherichia coli infection - EHEC

204856_at 0.245 5.748 2.913 1.058e-02 0.170 -2.774 B3GNT3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 19 17766918 NM_014256 19p13.1 Hs.657825 Hs.69009 13

Golgi apparatus

integral to plasma membrane

protein amino acid glycosylation

galactosyltransferase activity

membrane

transferase activity, transferring glycosyl groups

Glycosphingolipid biosynthesis - lacto and neolacto series

Metabolic pathways

200966_x_at -0.322 13.385 -2.913 1.059e-02 0.170 -2.774 ALDOA aldolase A, fructose-bisphosphate 16 29971991, 29983100, 29983473, 29984544 NM_000034 16p11.2 Hs.513490 55

actin binding

fructose-bisphosphate aldolase activity

glycolysis

ATP biosynthetic process

striated muscle contraction

actin filament organization

metabolic process

regulation of cell shape

actin cytoskeleton

tubulin binding

lyase activity

fructose 1,6-bisphosphate metabolic process

I band

identical protein binding

muscle maintenance

fructose binding

extracellular vesicular exosome

Glycolysis / Gluconeogenesis

Pentose phosphate pathway

Fructose and mannose metabolism

Carbon fixation in photosynthetic organisms

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

209900_s_at -0.527 8.169 -2.912 1.060e-02 0.170 -2.776 SLC16A1 solute carrier family 16, member 1 (monocarboxylic acid transporter 1) 1 -113255992 AL162079 1p12 Hs.75231 43

protein binding

membrane fraction

plasma membrane

transport

mevalonate transmembrane transporter activity

symporter activity

secondary active monocarboxylate transmembrane transporter activity

organic anion transport

mevalonate transport

integral to membrane

 
216958_s_at 0.414 6.588 2.912 1.060e-02 0.170 -2.776 IVD isovaleryl Coenzyme A dehydrogenase 15 38484977 AK022777 15q14-q15 Hs.513646 21

mitochondrion

mitochondrial matrix

isovaleryl-CoA dehydrogenase activity

electron carrier activity

FAD binding

oxidation reduction

Valine, leucine and isoleucine degradation

Metabolic pathways

216713_at -0.350 6.987 -2.912 1.061e-02 0.170 -2.777 KRIT1 KRIT1, ankyrin repeat containing 7 -91666218, -91666218, -91666218 AL049325 7q21-q22 Hs.531987 48

small GTPase regulator activity

protein binding

cytoskeleton

small GTPase mediated signal transduction

membrane

 
239527_at 0.279 2.997 2.911 1.063e-02 0.170 -2.778 RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 2 135526322 BF103605 2q21.3 Hs.306327 17

GTPase activator activity

Rab GTPase activator activity

soluble fraction

cytoplasm

Rab GTPase binding

regulation of GTPase activity

 
202799_at 0.309 8.734 2.911 1.064e-02 0.171 -2.779 CLPP ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli) 19 6312462 NM_006012 19p13.3 Hs.515092 9

nucleotide binding

serine-type endopeptidase activity

protein binding

ATP binding

mitochondrion

proteolysis

peptidase activity

 
212060_at -0.634 5.202 -2.911 1.064e-02 0.171 -2.779 SR140 U2-associated SR140 protein 3 144203061 AU152088 3q23 Hs.596572 4

nucleotide binding

RNA binding

RNA processing

 
228559_at -0.356 3.871 -2.910 1.065e-02 0.171 -2.780 CENPN centromere protein N 16 79597603, 79597603, 79597603 BF111626 16q23.2 Hs.55028 9

chromosome, centromeric region

condensed chromosome kinetochore

nucleus

chromosome

 
225845_at -0.485 10.007 -2.910 1.066e-02 0.171 -2.781 ZBTB44 zinc finger and BTB domain containing 44 11 -129601783 BG253884 11q24.3 Hs.719099 7

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
205932_s_at 0.280 5.757 2.909 1.066e-02 0.171 -2.781 MSX1 msh homeobox 1 4 4912292 NM_002448 4p16.3-p16.1 Hs.424414 53

negative regulation of transcription from RNA polymerase II promoter

in utero embryonic development

heart morphogenesis

transcription factor activity

protein binding

nucleus

multicellular organismal development

muscle organ development

negative regulation of cell proliferation

transcription repressor activity

embryonic limb morphogenesis

BMP signaling pathway

forebrain development

midbrain development

negative regulation of apoptosis

sequence-specific DNA binding

cartilage development

 
225154_at -0.240 8.403 -2.909 1.067e-02 0.171 -2.782 SYAP1 synapse associated protein 1, SAP47 homolog (Drosophila) X 16647675 BG029566 Xp22.2 Hs.605178 11

nucleus

 
229726_at 0.232 5.785 2.909 1.067e-02 0.171 -2.782 GRAP GRB2-related adaptor protein 17 -18864714 AW007479 17p11.2 Hs.567416 13

SH3/SH2 adaptor activity

protein binding

cytoplasm

Ras protein signal transduction

cell-cell signaling

 
204699_s_at 0.274 4.663 2.909 1.067e-02 0.171 -2.782 C1orf107 chromosome 1 open reading frame 107 1 208067955 N30910 1q32.2 Hs.194754 6

nucleus

multicellular organismal development

 
201534_s_at -0.436 7.049 -2.909 1.068e-02 0.171 -2.782 UBL3 ubiquitin-like 3 13 -29236545 AF044221 13q12-q13 Hs.145575 12

intracellular

plasma membrane

 
210458_s_at -0.713 4.705 -2.909 1.068e-02 0.171 -2.782 TANK TRAF family member-associated NFKB activator 2 161701711, 161701711 BC003388 2q24-q31 Hs.132257 22

protein binding

cytoplasm

signal transduction

zinc ion binding

metal ion binding

RIG-I-like receptor signaling pathway

233498_at -0.754 5.080 -2.909 1.068e-02 0.171 -2.783 ERBB4 v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian) 2 -211948686 AK024204 2q33.3-q34 Hs.390729 112

nucleotide binding

transmembrane receptor protein tyrosine kinase activity

receptor activity

protein binding

ATP binding

protein amino acid phosphorylation

signal transduction

transmembrane receptor protein tyrosine kinase signaling pathway

nervous system development

heart development

cell proliferation

membrane

integral to membrane

basolateral plasma membrane

transferase activity

cell fate commitment

ErbB signaling pathway

Calcium signaling pathway

Endocytosis

230430_at 0.201 5.452 2.908 1.069e-02 0.171 -2.783 ENTPD2 ectonucleoside triphosphate diphosphohydrolase 2 9 -139062373 AW134837 9q34 Hs.123036 14

magnesium ion binding

calcium ion binding

membrane

integral to membrane

hydrolase activity

Purine metabolism

224314_s_at -0.501 5.655 -2.908 1.070e-02 0.171 -2.784 EGLN1 egl nine homolog 1 (C. elegans) 1 -229566120 AF277174 1q42.1 Hs.444450 Hs.710300 42

response to hypoxia

embryonic placenta development

iron ion binding

protein binding

cytosol

heart development

zinc ion binding

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

L-ascorbic acid binding

peptidyl-proline dioxygenase activity

oxygen homeostasis

negative regulation of transcription factor activity

metal ion binding

oxidation reduction

Pathways in cancer

Renal cell carcinoma

218179_s_at -0.388 5.932 -2.907 1.071e-02 0.171 -2.785 C4orf41 chromosome 4 open reading frame 41 4 184817439 NM_021942 4q35.1 Hs.443240 6    
203533_s_at -0.434 7.873 -2.907 1.071e-02 0.171 -2.785 CUL5 cullin 5 11 107384617 NM_003478 11q22-q23 Hs.440320 Hs.701122 38

G1/S transition of mitotic cell cycle

receptor activity

calcium channel activity

protein binding

cytosol

ubiquitin-dependent protein catabolic process

cell cycle arrest

negative regulation of cell proliferation

induction of apoptosis by intracellular signals

cullin-RING ubiquitin ligase complex

ubiquitin protein ligase binding

interspecies interaction between organisms

Ubiquitin mediated proteolysis

1553364_at 0.235 2.841 2.907 1.071e-02 0.171 -2.785 PNPLA1 patatin-like phospholipase domain containing 1 6 36318922, 36318957, 36346214 NM_173676 6p21.31 Hs.407002 5

metabolic process

lipid catabolic process

hydrolase activity

 
208570_at 0.301 3.165 2.907 1.072e-02 0.171 -2.786 WNT1 wingless-type MMTV integration site family, member 1 12 47658502 NM_005430 12q13 Hs.248164 72

cell fate specification

signal transducer activity

receptor binding

extracellular region

proteinaceous extracellular matrix

establishment or maintenance of cell polarity

Wnt receptor signaling pathway, calcium modulating pathway

multicellular organismal development

central nervous system development

cell migration

diencephalon development

forebrain anterior/posterior pattern formation

midbrain-hindbrain boundary maturation during brain development

cell differentiation

inner ear morphogenesis

positive regulation of transcription, DNA-dependent

neuron fate determination

Wnt signaling pathway

Hedgehog signaling pathway

Melanogenesis

Pathways in cancer

Basal cell carcinoma

228198_s_at 0.338 6.122 2.906 1.073e-02 0.171 -2.787 LOC729234 fumarylacetoacetate hydrolase domain containing 2 pseudogene 2 96040025 AI271418 2q11.1 Hs.348629 2    
213840_s_at 0.225 6.241 2.906 1.073e-02 0.171 -2.787 MRPS12 mitochondrial ribosomal protein S12 19 44113187, 44113433 R68573 19q13.1-q13.2 Hs.411125 15

structural constituent of ribosome

protein binding

intracellular

mitochondrion

mitochondrial ribosome

ribosome

translation

small ribosomal subunit

 
228077_at 0.464 7.456 2.906 1.073e-02 0.171 -2.787 MRI1 methylthioribose-1-phosphate isomerase homolog (S. cerevisiae) 19 13736336 AK026666 19p13.2 Hs.439370 11

cellular amino acid biosynthetic process

methionine biosynthetic process

isomerase activity

identical protein binding

cellular biosynthetic process

S-methyl-5-thioribose-1-phosphate isomerase activity

 
223382_s_at -0.415 8.410 -2.906 1.073e-02 0.171 -2.787 ZNRF1 zinc and ring finger 1 16 73590415 AL136903 16q23.1 Hs.427284 11

protein binding

lysosome

endosome

zinc ion binding

membrane

ligase activity

modification-dependent protein catabolic process

cell junction

cytoplasmic vesicle

synapse

metal ion binding

 
209077_at 0.269 9.175 2.906 1.074e-02 0.171 -2.788 TXN2 thioredoxin 2 22 -35193038 AL022313 22q13.1 Hs.211929 19

nucleolus

cytoplasm

mitochondrion

glycerol ether metabolic process

transport

electron carrier activity

protein disulfide oxidoreductase activity

electron transport chain

cell redox homeostasis

 
212515_s_at -0.679 8.010 -2.906 1.074e-02 0.171 -2.788 DDX3X DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked X 41077594 BG492602 Xp11.3-p11.23 Hs.719127 34

nucleotide binding

DNA binding

RNA binding

ATP-dependent RNA helicase activity

helicase activity

protein binding

ATP binding

nucleus

cytoplasm

plasma membrane

nuclear speck

hydrolase activity

interspecies interaction between organisms

RIG-I-like receptor signaling pathway

215418_at 0.297 5.060 2.906 1.074e-02 0.171 -2.788 PARVA parvin, alpha 11 12355721 AK022316 11p15.3 Hs.607144 17

actin binding

protein binding

nucleus

cytoplasm

cytoskeleton

plasma membrane

focal adhesion

cell adhesion

lamellipodium

cell junction

Focal adhesion

1554468_s_at 0.246 6.161 2.906 1.074e-02 0.171 -2.788 FBF1 Fas (TNFRSF6) binding factor 1 17 -71418212 AU143610 17q25.1 Hs.442609 7

cytoplasm

 
215498_s_at -0.676 8.537 -2.905 1.076e-02 0.171 -2.790 MAP2K3 mitogen-activated protein kinase kinase 3 17 21128560, 21135373 AA780381 17q11.2 Hs.514012 45

nucleotide binding

activation of MAPK activity

protein serine/threonine kinase activity

MAP kinase kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

inflammatory response

signal transduction

transferase activity

regulation of cytokine biosynthetic process

positive regulation of protein kinase activity

positive regulation of transcription, DNA-dependent

cardiac muscle contraction

MAPK signaling pathway

Toll-like receptor signaling pathway

Fc epsilon RI signaling pathway

GnRH signaling pathway

Amyotrophic lateral sclerosis (ALS)

233939_at 0.353 6.084 2.905 1.076e-02 0.171 -2.790 REXO1 REX1, RNA exonuclease 1 homolog (S. cerevisiae) 19 -1766244 AL117522 19p13.3 Hs.192477 6

nucleic acid binding

exonuclease activity

intracellular

nucleus

hydrolase activity

 
222629_at 0.597 5.370 2.905 1.077e-02 0.171 -2.790 REV1 REV1 homolog (S. cerevisiae) 2 -99383369 N51427 2q11.1-q11.2 Hs.443077 27

magnesium ion binding

damaged DNA binding

DNA-directed DNA polymerase activity

protein binding

intracellular

nucleus

DNA replication

DNA repair

response to DNA damage stimulus

response to UV

transferase activity

deoxycytidyl transferase activity

error-prone postreplication DNA repair

 
202007_at 0.454 5.639 2.905 1.077e-02 0.171 -2.790 NID1 nidogen 1 1 -234205754 BF940043 1q43 Hs.356624 39

calcium ion binding

protein binding

extracellular region

basement membrane

cell adhesion

cell-matrix adhesion

bioluminescence

membrane

protein-chromophore linkage

 
208629_s_at 0.533 8.764 2.904 1.079e-02 0.171 -2.792 HADHA hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), alpha subunit 2 -26267007 BG472176 2p23 Hs.516032 36

acyl-CoA binding

3-hydroxyacyl-CoA dehydrogenase activity

acetyl-CoA C-acetyltransferase activity

acetyl-CoA C-acyltransferase activity

enoyl-CoA hydratase activity

binding

mitochondrion

mitochondrial inner membrane

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

oxidoreductase activity

fatty acid beta-oxidation multienzyme complex

long-chain-enoyl-CoA hydratase activity

long-chain-3-hydroxyacyl-CoA dehydrogenase activity

lyase activity

response to drug

mitochondrial nucleoid

NAD or NADH binding

oxidation reduction

Fatty acid elongation in mitochondria

Fatty acid metabolism

Valine, leucine and isoleucine degradation

Lysine degradation

Tryptophan metabolism

beta-Alanine metabolism

Benzoate degradation via CoA ligation

Propanoate metabolism

Butanoate metabolism

Limonene and pinene degradation

Caprolactam degradation

Biosynthesis of unsaturated fatty acids

Metabolic pathways

206584_at 0.604 3.717 2.904 1.079e-02 0.171 -2.792 LY96 lymphocyte antigen 96 8 75066140 NM_015364 8q21.11 Hs.660766 65

lipopolysaccharide receptor activity

protein binding

extracellular region

extracellular space

plasma membrane

plasma membrane

inflammatory response

immune response

cellular defense response

cell surface receptor linked signal transduction

I-kappaB kinase/NF-kappaB cascade

coreceptor activity

detection of lipopolysaccharide

lipopolysaccharide receptor complex

Toll-like receptor signaling pathway

Pathogenic Escherichia coli infection - EHEC

203978_at -0.276 7.047 -2.903 1.079e-02 0.171 -2.792 NUBP1 nucleotide binding protein 1 (MinD homolog, E. coli) 16 10745198 NM_002484 16p13.13 Hs.81469 9

nucleotide binding

protein binding

ATP binding

cytosol

cellular iron ion homeostasis

cell growth

iron-sulfur cluster assembly

nucleoside-triphosphatase activity

iron-sulfur cluster binding

 
212306_at -0.624 7.919 -2.903 1.080e-02 0.171 -2.793 CLASP2 cytoplasmic linker associated protein 2 3 -33512741 AI741784 3p22.3 Hs.108614 17

condensed chromosome kinetochore

protein binding

cytoplasm

Golgi apparatus

centrosome

spindle

kinetochore microtubule

cytoskeleton

cytoplasmic microtubule

cell cortex

negative regulation of microtubule depolymerization

cell cycle

mitosis

establishment or maintenance of cell polarity

galactoside 2-alpha-L-fucosyltransferase activity

regulation of microtubule polymerization or depolymerization

microtubule plus-end binding

cell division

 
220544_at 0.270 4.192 2.903 1.080e-02 0.171 -2.793 TSKS testis-specific serine kinase substrate 19 -54934822 NM_021733 19q13.3 Hs.515858 6

protein binding

 
1552919_at 0.265 2.365 2.903 1.081e-02 0.171 -2.794 C4orf36 chromosome 4 open reading frame 36 4 -88016381 NM_144645 4q21.3 Hs.339646 4    
215280_s_at 0.316 5.532 2.902 1.082e-02 0.171 -2.794 PPFIA3 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 19 54314474 AK023850 19q13.33 Hs.413748 8

protein binding

cytoplasm

cell surface

 
200832_s_at 2.124 5.195 2.902 1.082e-02 0.171 -2.794 SCD stearoyl-CoA desaturase (delta-9-desaturase) 10 102096761 AB032261 10q24.31 Hs.558396 Hs.597496 43

stearoyl-CoA 9-desaturase activity

iron ion binding

endoplasmic reticulum

fatty acid biosynthetic process

membrane

integral to membrane

oxidoreductase activity

nuclear membrane

oxidation reduction

Biosynthesis of unsaturated fatty acids

PPAR signaling pathway

210298_x_at -0.644 11.878 -2.902 1.083e-02 0.171 -2.795 FHL1 four and a half LIM domains 1 X 135056526, 135057224, 135058402, 135079120, 135079731, 135106578, 135106720 AF098518 Xq26 Hs.435369 38

molecular_function

cellular_component

nucleus

cytoplasm

cytosol

multicellular organismal development

muscle organ development

zinc ion binding

organ morphogenesis

cell growth

cell differentiation

metal ion binding

 
212253_x_at -0.289 7.883 -2.902 1.083e-02 0.171 -2.795 DST dystonin 6 -56587338, -56576527, -56430743, -56430743, -56430743, -56430743, -56430743 BG253119 6p12.1 Hs.631992 Hs.669931 48

actin binding

integrin binding

calcium ion binding

protein binding

protein binding

basement membrane

cytoplasm

cytoplasm

cytoskeleton

cell cycle arrest

cell adhesion

integrin-mediated signaling pathway

protein C-terminus binding

cytoplasmic membrane-bounded vesicle

actin cytoskeleton organization

hemidesmosome

intermediate filament cytoskeleton organization

intermediate filament cytoskeleton organization

intermediate filament cytoskeleton organization

actin filament binding

 
242274_x_at 0.414 4.133 2.902 1.083e-02 0.171 -2.796 SLC25A42 solute carrier family 25, member 42 19 19035807 AI057363 19p13.11 Hs.303669 3

binding

mitochondrion

mitochondrial inner membrane

transport

membrane

integral to membrane

 
224878_at -0.365 8.142 -2.902 1.084e-02 0.171 -2.796 UBFD1 ubiquitin family domain containing 1 16 23476362 N63936 16p12 Hs.3459 3    
223167_s_at -0.895 8.359 -2.901 1.085e-02 0.172 -2.797 USP25 ubiquitin specific peptidase 25 21 16024366 AF170562 21q11.2 Hs.473370 11

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

protein modification process

proteolysis

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
35776_at -0.278 7.459 -2.901 1.085e-02 0.172 -2.797 ITSN1 intersectin 1 (SH3 domain protein) 21 33936653, 33936653 AF064243 21q22.1-q22.2 Hs.160324 39

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

calcium ion binding

protein binding

intracellular

intracellular signaling cascade

membrane

synaptosome

lamellipodium

cell junction

regulation of Rho protein signal transduction

synapse

synaptic vesicle endocytosis

 
208842_s_at -0.279 7.657 -2.900 1.087e-02 0.172 -2.799 GORASP2 golgi reassembly stacking protein 2, 55kDa 2 171493956 W93787 2q31.1-q31.2 Hs.431317 16

protein binding

Golgi apparatus

Golgi medial cisterna

Golgi organization

membrane

 
225167_at 0.358 4.415 2.900 1.087e-02 0.172 -2.799 FRMD4A FERM domain containing 4A 10 -13725711 AW515645 10p13 Hs.330463 Hs.656573 3

binding

cytoplasm

cytoskeleton

 
213128_s_at -0.536 8.400 -2.900 1.088e-02 0.172 -2.799 UBE3A ubiquitin protein ligase E3A 15 -23133488, -23133488, -23133488 AA527499 15q11-q13 Hs.598862 76

ubiquitin-protein ligase activity

protein binding

intracellular

nucleus

cytosol

protein modification process

proteolysis

ubiquitin-dependent protein catabolic process

brain development

protein ubiquitination

ligase activity

acid-amino acid ligase activity

protein complex

interspecies interaction between organisms

Ubiquitin mediated proteolysis

203588_s_at -0.423 6.335 -2.900 1.088e-02 0.172 -2.800 TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) 3 -143154017 BG034328 3q23 Hs.379018 14

transcription factor activity

transcription cofactor activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

cell cycle

protein domain specific binding

Cell cycle

203322_at 0.315 6.327 2.899 1.088e-02 0.172 -2.800 ADNP2 ADNP homeobox 2 18 75967902 AU145934 18q23 Hs.131915 5

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

sequence-specific DNA binding

metal ion binding

 
201749_at 0.228 7.762 2.899 1.088e-02 0.172 -2.800 ECE1 endothelin converting enzyme 1 1 -21416326, -21416326, -21416326, -21416326 BF969352 1p36.1 Hs.195080 63

response to hypoxia

positive regulation of receptor recycling

regulation of systemic arterial blood pressure by endothelin

metalloendopeptidase activity

membrane fraction

endosome

Golgi apparatus

plasma membrane

proteolysis

apoptosis

heart development

peptidase activity

zinc ion binding

external side of plasma membrane

substance P catabolic process

bradykinin catabolic process

calcitonin catabolic process

integral to membrane

peptide hormone binding

regulation of vasoconstriction

intrinsic to endosome membrane

vesicle

Weibel-Palade body

endothelin maturation

embryonic digit morphogenesis

protein homodimerization activity

ear development

positive regulation of G-protein coupled receptor protein signaling pathway

metal ion binding

perinuclear region of cytoplasm

 
226559_at 0.236 4.875 2.899 1.089e-02 0.172 -2.800 IER5L immediate early response 5-like 9 -130977651 AL555612 9q34.11 Hs.529857 4    
223370_at -0.403 6.898 -2.899 1.090e-02 0.172 -2.801 PLEKHA3 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3 2 179053444 AF286162 2q31.2 Hs.41086 7

phospholipid binding

phosphatidylinositol binding

cellular_component

cytoplasm

biological_process

membrane

 
230152_at -0.393 4.208 -2.899 1.090e-02 0.172 -2.801 WDR52 WD repeat domain 52 3 -114564401 AI346359 3q13.2 Hs.584936 2    
226184_at -0.475 6.725 -2.898 1.091e-02 0.172 -2.802 FMNL2 formin-like 2 2 152899996 AI123567 2q23.3 Hs.654630 9

actin binding

cytoplasm

cellular component organization

Rho GTPase binding

actin cytoskeleton organization

 
204822_at 0.194 2.579 2.898 1.093e-02 0.172 -2.803 TTK TTK protein kinase 6 80771077 NM_003318 6q13-q21 Hs.169840 33

nucleotide binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

spindle

protein amino acid phosphorylation

mitotic spindle organization

mitotic cell cycle spindle assembly checkpoint

positive regulation of cell proliferation

positive regulation of pathway-restricted SMAD protein phosphorylation

transferase activity

Cell cycle

231271_x_at 0.362 4.905 2.896 1.095e-02 0.172 -2.805 NMRAL1 NmrA-like family domain containing 1 16 -4451695 AI080701 16p13.3 Hs.288969 8

binding

regulation of nitrogen utilization

oxidoreductase activity

transcription repressor activity

oxidation reduction

 
213579_s_at -0.473 6.819 -2.896 1.096e-02 0.173 -2.806 EP300 E1A binding protein p300 22 39818559 AI459462 22q13.2 Hs.517517 338

histone acetyltransferase complex

response to hypoxia

somitogenesis

transcription factor activity

transcription coactivator activity

histone acetyltransferase activity

nucleus

transcription factor complex

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

apoptosis

cell cycle

signal transduction

nervous system development

heart development

skeletal muscle tissue development

protein C-terminus binding

zinc ion binding

organ morphogenesis

acetyltransferase activity

histone acetylation

transferase activity

N-terminal peptidyl-lysine acetylation

lung development

homeostatic process

peroxisome proliferator activated receptor binding

interspecies interaction between organisms

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

positive regulation of transcription factor activity

Cell cycle

Wnt signaling pathway

Notch signaling pathway

TGF-beta signaling pathway

Adherens junction

Jak-STAT signaling pathway

Long-term potentiation

Melanogenesis

Huntington's disease

Pathways in cancer

Renal cell carcinoma

Prostate cancer

238057_at -0.334 5.319 -2.896 1.097e-02 0.173 -2.807 USP45 ubiquitin specific peptidase 45 6 -99986905 AW195800 6q16.2 Hs.143410 6

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

zinc ion binding

metal ion binding

 
228274_at 0.617 4.594 2.895 1.098e-02 0.173 -2.808 SDSL serine dehydratase-like 12 112344598 BE963955 12q24.13 Hs.337594 4

cellular amino acid metabolic process

metabolic process

lyase activity

pyridoxal phosphate binding

 
235457_at 0.524 5.597 2.895 1.099e-02 0.173 -2.808 MAML2 mastermind-like 2 (Drosophila) 11 -95351087 AI769569 11q21 Hs.428214 17

transcription coactivator activity

nucleus

Notch signaling pathway

nuclear speck

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

Notch signaling pathway

202519_at -0.402 9.261 -2.895 1.099e-02 0.173 -2.808 MLXIP MLX interacting protein 12 121001142 NM_014938 12q24.31 Hs.437153 7

DNA binding

nucleus

cytoplasm

mitochondrion

mitochondrial outer membrane

membrane

transcription regulator activity

regulation of transcription

 
205155_s_at 0.300 5.574 2.894 1.100e-02 0.173 -2.809 SPTBN2 spectrin, beta, non-erythrocytic 2 11 -66209296 NM_006946 11q13 Hs.26915 18

actin binding

structural constituent of cytoskeleton

cytoplasm

cytoskeleton

cell cortex

spectrin

cell death

vesicle-mediated transport

actin filament capping

 
204473_s_at -0.468 6.889 -2.894 1.101e-02 0.173 -2.810 ZNF592 zinc finger protein 592 15 83092821 NM_014630 15q25.3 Hs.79347 7

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
224015_s_at 0.276 5.549 2.893 1.102e-02 0.173 -2.811 MRPS25 mitochondrial ribosomal protein S25 3 -15065022 BC003590 3p25 Hs.715617 9

structural constituent of ribosome

protein binding

mitochondrion

mitochondrial small ribosomal subunit

ribosome

translation

 
226580_at -0.360 7.477 -2.893 1.102e-02 0.173 -2.811 BRMS1L breast cancer metastasis-suppressor 1-like 14 35365347 AA779684 14q13.2 Hs.525299 3

nucleus

regulation of growth

regulation of transcription

 
235698_at 0.384 5.197 2.893 1.103e-02 0.173 -2.812 ZFP90 zinc finger protein 90 homolog (mouse) 16 67131161 AA771779 16q22.1 Hs.461074 Hs.709017 7

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
203442_x_at 0.310 5.518 2.893 1.103e-02 0.173 -2.812 EML3 echinoderm microtubule associated protein like 3 11 -62126266 AA478965 11q12.3 Hs.379785 8

protein binding

cytoplasm

microtubule

 
203406_at -0.395 7.774 -2.893 1.104e-02 0.173 -2.813 MFAP1 microfibrillar-associated protein 1 15 -41884024 NM_005926 15q15-q21 Hs.61418 9

microfibril

molecular_function

extracellular region

proteinaceous extracellular matrix

biological_process

 
233533_at -0.249 4.415 -2.893 1.104e-02 0.173 -2.813 KRTAP1-5 keratin associated protein 1-5 17 -36435804, 326122 AJ406928 17q12-q21 Hs.534499 4

molecular_function

cellular_component

biological_process

keratin filament

 
233974_s_at 0.441 6.381 2.892 1.104e-02 0.173 -2.813 FAM129B family with sequence similarity 129, member B 9 -129307438, -129307438 AK023580 9q33.3-q34.11 Hs.522401 8    
223121_s_at 0.222 5.079 2.892 1.105e-02 0.173 -2.814 SFRP2 secreted frizzled-related protein 2 4 -154921191 AW003584 4q31.3 Hs.481022 37

somitogenesis

protein binding

extracellular region

multicellular organismal development

Wnt receptor signaling pathway

cell differentiation

cellular response to extracellular stimulus

Wnt signaling pathway

224991_at 0.331 4.888 2.891 1.106e-02 0.173 -2.815 CMIP c-Maf-inducing protein 16 80036275, 80086454 AI819630 16q23 Hs.709248 7

nucleus

cytoplasm

 
202131_s_at -0.488 7.927 -2.890 1.109e-02 0.173 -2.817 RIOK3 RIO kinase 3 (yeast) 18 19286784 NM_003831 18q11.2 Hs.445511 Hs.719109 9

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

chromosome segregation

kinase activity

transferase activity

 
203478_at 0.181 11.672 2.890 1.109e-02 0.173 -2.817 NDUFC1 NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa 4 -140430540 NM_002494 4q28.2-q31.1 Hs.84549 8

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

transport

NADH dehydrogenase (ubiquinone) activity

membrane

integral to membrane

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

227282_at 0.335 4.869 2.890 1.109e-02 0.173 -2.817 PCDH19 protocadherin 19 X -99433297 AB037734 Xq13.3 Hs.4993 12

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

 
232704_s_at -0.384 6.347 -2.890 1.110e-02 0.173 -2.818 LRRFIP2 leucine rich repeat (in FLII) interacting protein 2 3 -37069120 AK025207 3p22.2 Hs.719246 7

protein binding

cellular_component

biological_process

Wnt receptor signaling pathway

LRR domain binding

 
236004_at -0.614 6.871 -2.890 1.110e-02 0.173 -2.818 MUDENG MU-2/AP1M2 domain containing, death-inducing 14 56805358 AW195610 14q22.3 Hs.597349 9

protein binding

intracellular protein transport

vesicle-mediated transport

clathrin adaptor complex

 
229435_at 0.397 3.363 2.890 1.110e-02 0.173 -2.818 GLIS3 GLIS family zinc finger 3 9 -3814127, -3814127 AW025602 9p24.2 Hs.162125 Hs.644570 8

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

specific RNA polymerase II transcription factor activity

intracellular

zinc ion binding

nuclear part

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

 
228316_at 0.385 4.186 2.889 1.111e-02 0.173 -2.818 C2orf63 chromosome 2 open reading frame 63 2 -55253187, -55253187 AA905470 2p16.1 Hs.347014 4

binding

 
236361_at 0.456 5.836 2.889 1.111e-02 0.173 -2.819 GALNTL2 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2 3 16191187 BF432376 3p25.1 Hs.411308 10

polypeptide N-acetylgalactosaminyltransferase activity

calcium ion binding

sugar binding

Golgi apparatus

membrane

integral to membrane

transferase activity, transferring glycosyl groups

transport vesicle

manganese ion binding

O-Glycan biosynthesis

Metabolic pathways

208288_at 0.262 2.346 2.888 1.113e-02 0.174 -2.820 ABCB11 ATP-binding cassette, sub-family B (MDR/TAP), member 11 2 -169487694 NM_003742 2q24 Hs.658439 40

nucleotide binding

transporter activity

ATP binding

membrane fraction

integral to plasma membrane

transport

sodium-exporting ATPase activity, phosphorylative mechanism

bile acid-exporting ATPase activity

membrane

ATPase activity

apical part of cell

intercellular canaliculus

ABC transporters

225293_at 0.509 7.295 2.888 1.113e-02 0.174 -2.821 COL27A1 collagen, type XXVII, alpha 1 9 115958051 AK021957 9q32 Hs.494892 8

extracellular matrix structural constituent

extracellular region

collagen

cell adhesion

 
221530_s_at -0.707 9.452 -2.888 1.115e-02 0.174 -2.822 BHLHE41 basic helix-loop-helix family, member e41 12 -26164227 BE857425 12p11.23-p12.1 Hs.177841 15

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

cell proliferation

organ morphogenesis

cell differentiation

Circadian rhythm - mammal

219000_s_at 0.397 5.478 2.888 1.115e-02 0.174 -2.822 DSCC1 defective in sister chromatid cohesion 1 homolog (S. cerevisiae) 8 -120915362 NM_024094 8q24.12 Hs.315167 8

chromosome, centromeric region

chromatin

DNA binding

protein binding

nucleus

nucleoplasm

DNA replication

cell cycle

maintenance of mitotic sister chromatid cohesion

 
201560_at 0.677 7.923 2.887 1.115e-02 0.174 -2.822 CLIC4 chloride intracellular channel 4 1 24944346 NM_013943 1p36.11 Hs.440544 Hs.595507 25

voltage-gated ion channel activity

voltage-gated chloride channel activity

protein binding

intracellular

soluble fraction

nucleus

cytoplasm

mitochondrion

plasma membrane

microvillus

ion transport

chloride transport

actin cytoskeleton

integral to membrane

cell differentiation

negative regulation of cell migration

chloride ion binding

cytoplasmic vesicle

chloride channel complex

 
218806_s_at 0.266 3.654 2.887 1.115e-02 0.174 -2.822 VAV3 vav 3 guanine nucleotide exchange factor 1 -107915304, -107915304 AF118887 1p13.3 Hs.267659 21

SH3/SH2 adaptor activity

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

GTPase activator activity

protein binding

intracellular

small GTPase mediated signal transduction

zinc ion binding

diacylglycerol binding

regulation of Rho protein signal transduction

metal ion binding

Chemokine signaling pathway

Focal adhesion

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

244761_at 0.298 4.278 2.887 1.117e-02 0.174 -2.823 FLJ44606 glutaredoxin-like protein YDR286C homolog 5   BE674694 5q23.2 Hs.49573 1

transport

electron transport chain

 
225021_at -0.419 7.421 -2.887 1.117e-02 0.174 -2.824 ZNF532 zinc finger protein 532 18 54681040 AA861416 18q21.32 Hs.529023 Hs.607676 4

DNA binding

intracellular

nucleus

nucleolus

Golgi apparatus

zinc ion binding

regulation of transcription

metal ion binding

 
200884_at 1.121 8.378 2.885 1.120e-02 0.174 -2.826 CKB creatine kinase, brain 14 -103055748 NM_001823 14q32 Hs.173724 40

nucleotide binding

creatine kinase activity

protein binding

ATP binding

cytoplasm

mitochondrion

cytosol

creatine metabolic process

brain development

cellular chloride ion homeostasis

Arginine and proline metabolism

Metabolic pathways

218387_s_at 0.340 6.166 2.885 1.121e-02 0.174 -2.827 PGLS 6-phosphogluconolactonase 19 17483431 NM_012088 19p13.2 Hs.466165 5

carbohydrate metabolic process

pentose-phosphate shunt

hydrolase activity

6-phosphogluconolactonase activity

Pentose phosphate pathway

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of plant hormones

Metabolic pathways

221363_x_at 0.242 2.910 2.885 1.121e-02 0.174 -2.827 GPR25 G protein-coupled receptor 25 1 199108788 NM_005298 1q32.1 Hs.534316 4

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

 
226019_at -0.477 7.391 -2.885 1.121e-02 0.174 -2.827 OMA1 OMA1 homolog, zinc metallopeptidase (S. cerevisiae) 1 -58718978 AI927931 1p32.2-p32.1 Hs.425769 4

metalloendopeptidase activity

mitochondrion

proteolysis

peptidase activity

zinc ion binding

membrane

integral to membrane

metal ion binding

 
205120_s_at -0.387 8.075 -2.884 1.122e-02 0.174 -2.828 SGCB sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) 4 -52581617 U29586 4q12 Hs.438953 28

cytoplasm

cytoskeleton

plasma membrane

integral to plasma membrane

cytoskeleton organization

muscle organ development

sarcoglycan complex

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

238798_at -0.454 4.930 -2.884 1.122e-02 0.174 -2.828 TAPT1 transmembrane anterior posterior transformation 1 4 -15771225 AA811306 4p15.32 Hs.479223 5

receptor activity

multicellular organismal development

membrane

integral to membrane

 
201371_s_at -0.400 9.427 -2.884 1.123e-02 0.174 -2.828 CUL3 cullin 3 2 -225043112 AF062537 2q36.2 Hs.372286 39

G1/S transition of mitotic cell cycle

protein binding

nucleus

Golgi apparatus

ubiquitin-dependent protein catabolic process

cell cycle arrest

cyclin catabolic process

positive regulation of cell proliferation

induction of apoptosis by intracellular signals

cullin-RING ubiquitin ligase complex

ubiquitin protein ligase binding

Ubiquitin mediated proteolysis

65635_at 0.266 7.621 2.884 1.124e-02 0.174 -2.829 ENGASE endo-beta-N-acetylglucosaminidase 17 74582613 AL044097 17q25.3 Hs.29288 5

intracellular

cytoplasm

cytosol

metabolic process

hydrolase activity, acting on glycosyl bonds

mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity

Other glycan degradation

201854_s_at -0.448 7.057 -2.884 1.124e-02 0.174 -2.829 ATMIN ATM interactor 16 79626958 AI744148 16q23.2 Hs.16349 Hs.589959 9

intracellular

nucleus

response to DNA damage stimulus

zinc ion binding

metal ion binding

 
205345_at -0.617 5.725 -2.884 1.124e-02 0.174 -2.829 BARD1 BRCA1 associated RING domain 1 2 -215301519 NM_000465 2q34-q35 Hs.591642 100

ubiquitin ligase complex

tissue homeostasis

RNA binding

ubiquitin-protein ligase activity

protein binding

intracellular

nucleus

nucleus

cytoplasm

DNA repair

response to DNA damage stimulus

cell cycle arrest

zinc ion binding

protein ubiquitination

ligase activity

kinase binding

modification-dependent protein catabolic process

BRCA1-BARD1 complex

negative regulation of mRNA 3'-end processing

regulation of phosphorylation

protein homodimerization activity

positive regulation of apoptosis

negative regulation of apoptosis

positive regulation of protein catabolic process

negative regulation of protein export from nucleus

metal ion binding

protein heterodimerization activity

BRCA1-A complex

 
206405_x_at -0.908 8.049 -2.883 1.125e-02 0.174 -2.830 USP6 ubiquitin specific peptidase 6 (Tre-2 oncogene) 17 4972410 NM_004505 17p13 Hs.448851 21

nucleic acid binding

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

Rab GTPase activator activity

protein binding

intracellular

lysosome

protein modification process

ubiquitin-dependent protein catabolic process

peptidase activity

regulation of Rab GTPase activity

 
38671_at 0.291 7.151 2.883 1.126e-02 0.174 -2.831 PLXND1 plexin D1 3 -130756745 AB014520 3q22.1 Hs.301685 10

receptor activity

intracellular

plasma membrane

signal transduction

multicellular organismal development

integral to membrane

 
202850_at -0.420 9.111 -2.883 1.126e-02 0.174 -2.831 ABCD3 ATP-binding cassette, sub-family D (ALD), member 3 1 94656520, 94656520 NM_002858 1p22-p21 Hs.700576 25

nucleotide binding

protein binding

ATP binding

peroxisome

peroxisomal membrane

integral to peroxisomal membrane

transport

peroxisome organization

peroxisomal long-chain fatty acid import

membrane

integral to membrane

ATPase activity

ATPase activity, coupled to transmembrane movement of substances

ABC transporters

224956_at -0.515 6.367 -2.883 1.126e-02 0.174 -2.831 NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 17 -24606979 AI743689 17q11.2 Hs.462598 13

RNA binding

protein binding

nucleus

cytoplasm

Golgi apparatus

polysomal ribosome

 
226129_at 0.311 4.278 2.882 1.127e-02 0.174 -2.831 FAM83H family with sequence similarity 83, member H 8 -144878090 AI949095 8q24.3 Hs.67776 Hs.713170 7

biomineral formation

 
230813_at 0.249 6.161 2.882 1.127e-02 0.174 -2.832 LEPREL1 leprecan-like 1 3 -191157211, -191157211 BF434223 3q28 Hs.374191 11

iron ion binding

endoplasmic reticulum

Golgi apparatus

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

procollagen-proline 3-dioxygenase activity

L-ascorbic acid binding

metal ion binding

oxidation reduction

 
AFFX-HUMGAPDH/M33197_5_at -0.219 13.603 -2.882 1.127e-02 0.174 -2.832 GAPDH glyceraldehyde-3-phosphate dehydrogenase 12 6513917 AFFX-HUMGAPDH/M33197_5 12p13 Hs.544577 Hs.592355 Hs.598320 130

glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity

protein binding

cytoplasm

glucose metabolic process

glycolysis

membrane

oxidoreductase activity

perinuclear region of cytoplasm

NAD or NADH binding

oxidation reduction

Glycolysis / Gluconeogenesis

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

Alzheimer's disease

212657_s_at 0.292 4.343 2.882 1.127e-02 0.174 -2.832 IL1RN interleukin 1 receptor antagonist 2 113591940, 113601608 U65590 2q14.2 Hs.81134 610

cytokine activity

interleukin-1 receptor antagonist activity

protein binding

extracellular region

extracellular space

intracellular

cytoplasm

inflammatory response

immune response

response to glucocorticoid stimulus

 
204660_at 0.241 4.927 2.882 1.128e-02 0.174 -2.833 GFER growth factor, augmenter of liver regeneration 16 1974150 NM_005262 16p13.3-p13.12 Hs.27184 30

protein binding

cellular_component

mitochondrion

spermatogenesis

cell proliferation

oxidoreductase activity

thiol oxidase activity

oxidation reduction

 
228463_at 0.262 3.830 2.882 1.129e-02 0.174 -2.833 FOXA3 forkhead box A3 19 51059357 R99562 19q13.2-q13.4 Hs.36137 14

cellular glucose homeostasis

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

cellular response to starvation

sequence-specific DNA binding

Maturity onset diabetes of the young

222553_x_at -0.355 9.006 -2.881 1.129e-02 0.174 -2.833 OXR1 oxidation resistance 1 8 107351648, 107739211 AL541048 8q23 Hs.148778 11

molecular_function

cellular_component

nucleolus

mitochondrion

response to oxidative stress

cell wall macromolecule catabolic process

 
207521_s_at -0.246 4.248 -2.881 1.129e-02 0.174 -2.833 ATP2A3 ATPase, Ca++ transporting, ubiquitous 17 -3773917 AF068220 17p13.3 Hs.513870 27

nucleotide binding

magnesium ion binding

calcium-transporting ATPase activity

calcium ion binding

protein binding

ATP binding

nucleus

ATP biosynthetic process

cation transport

calcium ion transport

metabolic process

membrane

integral to membrane

sarcoplasmic reticulum

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

Calcium signaling pathway

Alzheimer's disease

209303_at 0.351 10.252 2.881 1.130e-02 0.175 -2.834 NDUFS4 NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase) 5 52892221 BC005270 5q11.1 Hs.528222 28

regulation of protein amino acid phosphorylation

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

oxygen and reactive oxygen species metabolic process

transport

brain development

NADH dehydrogenase (ubiquinone) activity

membrane

oxidoreductase activity, acting on NADH or NADPH

cAMP-mediated signaling

electron transport chain

mitochondrial respiratory chain complex I assembly

cellular respiration

positive regulation of fibroblast proliferation

response to cAMP

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

209759_s_at 0.374 9.160 2.881 1.131e-02 0.175 -2.835 DCI dodecenoyl-Coenzyme A delta isomerase (3,2 trans-enoyl-Coenzyme A isomerase) 16 -2229898 BC002746 16p13.3 Hs.403436 6

dodecenoyl-CoA delta-isomerase activity

mitochondrion

mitochondrial inner membrane

mitochondrial matrix

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

metabolic process

isomerase activity

Fatty acid metabolism

232207_at -0.362 5.575 -2.880 1.133e-02 0.175 -2.836 GUSBL2 glucuronidase, beta-like 2 6 -58354117 AK026691 6p11.2 Hs.561539 Hs.711053 5    
214687_x_at -0.339 13.496 -2.880 1.133e-02 0.175 -2.837 ALDOA aldolase A, fructose-bisphosphate 16 29971991, 29983100, 29983473, 29984544 AK026577 16p11.2 Hs.513490 55

actin binding

fructose-bisphosphate aldolase activity

glycolysis

ATP biosynthetic process

striated muscle contraction

actin filament organization

metabolic process

regulation of cell shape

actin cytoskeleton

tubulin binding

lyase activity

fructose 1,6-bisphosphate metabolic process

I band

identical protein binding

muscle maintenance

fructose binding

extracellular vesicular exosome

Glycolysis / Gluconeogenesis

Pentose phosphate pathway

Fructose and mannose metabolism

Carbon fixation in photosynthetic organisms

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

200760_s_at -0.443 10.202 -2.879 1.134e-02 0.175 -2.837 ARL6IP5 ADP-ribosylation-like factor 6 interacting protein 5 3 69216779 N92494 3p14 Hs.518060 Hs.716493 30

protein binding

cytoplasm

endoplasmic reticulum

L-glutamate transport

membrane

integral to membrane

 
210862_s_at 0.259 3.986 2.879 1.134e-02 0.175 -2.838 SARDH sarcosine dehydrogenase 9 -135518506, -135518506 AF047190 9q33-q34 Hs.198003 11

aminomethyltransferase activity

cytoplasm

mitochondrion

mitochondrial matrix

glycine catabolic process

sarcosine dehydrogenase activity

oxidoreductase activity

oxidation reduction

Glycine, serine and threonine metabolism

Metabolic pathways

224016_at 0.373 4.903 2.879 1.135e-02 0.175 -2.838 HIPK2 homeodomain interacting protein kinase 2 7 -138896855 AF111850 7q32-q34 Hs.397465 Hs.632033 66

nucleotide binding

transcription corepressor activity

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

cytoplasm

centrosome

protein amino acid phosphorylation

apoptosis

DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator

induction of apoptosis by intracellular signals

PML body

transferase activity

virus-host interaction

positive regulation of transforming growth factor beta receptor signaling pathway

nuclear membrane

regulation of transcription

positive regulation of transcription, DNA-dependent

positive regulation of JNK cascade

virion binding

 
223343_at 0.779 4.146 2.879 1.136e-02 0.175 -2.839 MS4A7 membrane-spanning 4-domains, subfamily A, member 7 11 59902533 AI301935 11q12 Hs.530735 10

receptor activity

signal transduction

membrane

integral to membrane

 
217874_at 0.282 10.903 2.878 1.136e-02 0.175 -2.839 SUCLG1 succinate-CoA ligase, alpha subunit 2 -84504162 NM_003849 2p11.2 Hs.270428 10

nucleotide binding

ATP citrate synthase activity

succinate-CoA ligase (ADP-forming) activity

succinate-CoA ligase (GDP-forming) activity

GTP binding

mitochondrion

mitochondrial inner membrane

mitochondrial matrix

tricarboxylic acid cycle

metabolic process

ligase activity

Citrate cycle (TCA cycle)

Propanoate metabolism

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

205799_s_at 0.366 2.425 2.878 1.138e-02 0.175 -2.840 SLC3A1 solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1 2 44356100 M95548 2p16.3 Hs.112916 44

catalytic activity

membrane fraction

integral to plasma membrane

carbohydrate metabolic process

cellular amino acid metabolic process

transport

basic amino acid transmembrane transporter activity

L-cystine transmembrane transporter activity

basic amino acid transport

L-cystine transport

membrane

cation binding

 
205945_at -1.029 5.699 -2.878 1.138e-02 0.175 -2.841 IL6R interleukin 6 receptor 1 152644292 NM_000565 1q21 Hs.709210 132

hepatic immune response

monocyte chemotaxis

positive regulation of leukocyte chemotaxis

receptor activity

ciliary neurotrophic factor receptor activity

interleukin-6 receptor activity

receptor binding

extracellular region

plasma membrane

interleukin-6 receptor complex

acute-phase response

integral to membrane

apical plasma membrane

enzyme binding

endocrine pancreas development

endocrine pancreas development

positive regulation of chemokine production

positive regulation of interleukin-6 production

response to cytokine stimulus

positive regulation of tyrosine phosphorylation of Stat3 protein

protein homodimerization activity

regulation of apoptosis

positive regulation of osteoblast differentiation

positive regulation of anti-apoptosis

positive regulation of smooth muscle cell proliferation

positive regulation of peptidyl-tyrosine phosphorylation

defense response to Gram-negative bacterium

interleukin-6-mediated signaling pathway

ciliary neurotrophic factor binding

ciliary neurotrophic factor-mediated signaling pathway

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

Hematopoietic cell lineage

212350_at -0.680 7.557 -2.877 1.138e-02 0.175 -2.841 TBC1D1 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 4 37569114 AB029031 4p14 Hs.176503 15

GTPase activator activity

Rab GTPase activator activity

intracellular

nucleus

regulation of Rab GTPase activity

 
226280_at -0.295 8.481 -2.877 1.138e-02 0.175 -2.841 BNIP2 BCL2/adenovirus E1B 19kDa interacting protein 2 15 -57742353 AA133277 15q22.2 Hs.646490 15

GTPase activator activity

calcium ion binding

protein binding

nuclear envelope

cytoplasm

apoptosis

anti-apoptosis

intracellular membrane-bounded organelle

perinuclear region of cytoplasm

 
235499_at 0.385 5.932 2.877 1.139e-02 0.175 -2.842 tcag7.1196 similar to GLI-Kruppel family member HKR1 7 149733772 AI660326 7q36.1 Hs.655734 2    
225497_at -0.404 7.747 -2.876 1.140e-02 0.175 -2.842 ATE1 arginyltransferase 1 10 -123492614 AL589591 10q26.13 Hs.632080 6

arginyltransferase activity

nucleus

cytoplasm

acyltransferase activity

protein arginylation

transferase activity

modification-dependent protein catabolic process

 
233520_s_at -0.344 12.478 -2.876 1.141e-02 0.175 -2.843 CMYA5 cardiomyopathy associated 5 5 79021414 AL359338 5q14.1 Hs.482625 7

cytoplasm

identical protein binding

perinuclear region of cytoplasm

 
209526_s_at 0.433 5.543 2.876 1.141e-02 0.175 -2.843 HDGFRP3 hepatoma-derived growth factor, related protein 3 15 -81597819 AB029156 15q25.2 Hs.513954 9

nucleus

cytoplasm

growth factor activity

cell proliferation

 
213645_at -0.808 6.686 -2.876 1.141e-02 0.175 -2.843 ENOSF1 enolase superfamily member 1 18 -663860, -663860, -662543 AF305057 18p11.32 Hs.369762 Hs.658550 12

magnesium ion binding

cellular_component

mitochondrion

metabolic process

cellular amino acid catabolic process

isomerase activity

 
218786_at -0.357 6.181 -2.876 1.142e-02 0.175 -2.844 NT5DC3 5'-nucleotidase domain containing 3 12 -102690210 NM_016575 12q22-q23.1 Hs.48428 4

magnesium ion binding

hydrolase activity

 
228588_s_at -0.511 9.960 -2.876 1.142e-02 0.175 -2.844 UBE2B ubiquitin-conjugating enzyme E2B (RAD6 homolog) 5 133734768 AI499236 5q23-q31 Hs.615284 Hs.644421 23

nucleotide binding

protein polyubiquitination

chromatin

ubiquitin-protein ligase activity

ubiquitin-protein ligase activity

protein binding

ATP binding

nucleus

replication fork

cytoplasm

plasma membrane

postreplication repair

postreplication repair

ubiquitin-dependent protein catabolic process

ubiquitin-dependent protein catabolic process

protein monoubiquitination

response to DNA damage stimulus

spermatogenesis

sperm axoneme assembly

response to UV

ligase activity

ubiquitin protein ligase binding

histone H2A ubiquitination

response to drug

protein stabilization

regulation of protein metabolic process

protein autoubiquitination

Wnt receptor signaling pathway through beta-catenin

Ubiquitin mediated proteolysis

224374_s_at 0.358 4.648 2.876 1.143e-02 0.175 -2.844 EMILIN2 elastin microfibril interfacer 2 18 2837027 AF270513 18p11.3 Hs.532815 5

protein binding

extracellular region

proteinaceous extracellular matrix

cell adhesion

biological_process

extracellular matrix constituent conferring elasticity

 
222465_at -0.336 9.339 -2.875 1.144e-02 0.176 -2.845 RSL24D1 ribosomal L24 domain containing 1 15 -53260803 AF165521 15q21 Hs.274772 Hs.593056 10

structural constituent of ribosome

intracellular

nucleus

nucleolus

ribosome

translation

ribosome biogenesis

Ribosome

202213_s_at -0.470 5.706 -2.874 1.146e-02 0.176 -2.847 CUL4B cullin 4B X -119542473, -119542473 AI650819 Xq23 Hs.102914 28

molecular_function

protein binding

cellular_component

DNA repair

ubiquitin-dependent protein catabolic process

response to DNA damage stimulus

cell cycle

cullin-RING ubiquitin ligase complex

ubiquitin protein ligase binding

Nucleotide excision repair

Ubiquitin mediated proteolysis

218679_s_at 0.382 8.927 2.874 1.147e-02 0.176 -2.847 VPS28 vacuolar protein sorting 28 homolog (S. cerevisiae) 8 -145619807 NM_016208 8q24.3 Hs.418175 18

protein binding

cytoplasm

endosome

cytosol

plasma membrane

protein transport

negative regulation of protein ubiquitination

Endocytosis

217115_at 0.239 5.152 2.873 1.148e-02 0.176 -2.848 LOC100240726 makorin ring finger protein 1 pseudogene 20 -44525707 AL031686 20q13.12   1    
212434_at 0.271 8.602 2.873 1.148e-02 0.176 -2.849 GRPEL1 GrpE-like 1, mitochondrial (E. coli) 4 -7112680 AI984421 4p16 Hs.443723 6

adenyl-nucleotide exchange factor activity

mitochondrion

mitochondrial matrix

protein folding

protein import into mitochondrial matrix

protein homodimerization activity

unfolded protein binding

chaperone binding

 
226635_at -0.500 7.121 -2.873 1.149e-02 0.176 -2.850 LOC401504 hypothetical gene supported by AK091718 9   BG170478 9p13.2 Hs.446271 2    
200980_s_at 0.289 11.084 2.872 1.150e-02 0.176 -2.850 PDHA1 pyruvate dehydrogenase (lipoamide) alpha 1 X 19271931 NM_000284 Xp22.2-p22.1 Hs.530331 54

pyruvate dehydrogenase (acetyl-transferring) activity

protein binding

mitochondrion

mitochondrial matrix

glycolysis

oxidoreductase activity

oxidation reduction

Glycolysis / Gluconeogenesis

Citrate cycle (TCA cycle)

Valine, leucine and isoleucine biosynthesis

Pyruvate metabolism

Butanoate metabolism

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

229986_at 0.214 5.812 2.872 1.151e-02 0.176 -2.851 ZNF717 zinc finger protein 717 3 -75868718 AW205616 3p12.3 Hs.556877 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
213597_s_at 0.205 2.947 2.872 1.152e-02 0.176 -2.851 CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like 3 37878672 BF002474 3p21.3 Hs.475963 18

molecular_function

phosphoprotein phosphatase activity

cellular_component

nucleus

biological_process

hydrolase activity

 
209440_at -0.324 8.355 -2.871 1.153e-02 0.176 -2.852 PRPS1 phosphoribosyl pyrophosphate synthetase 1 X 106758309 BC001605 Xq21.32-q24 Hs.56 26

nucleotide binding

magnesium ion binding

ribose phosphate diphosphokinase activity

ribose phosphate diphosphokinase activity

ribose phosphate diphosphokinase activity

ATP binding

cytosol

purine base metabolic process

purine nucleotide biosynthetic process

pyrimidine nucleotide biosynthetic process

nervous system development

nucleoside metabolic process

ribonucleoside monophosphate biosynthetic process

kinase activity

transferase activity

urate biosynthetic process

protein homodimerization activity

hypoxanthine biosynthetic process

Pentose phosphate pathway

Purine metabolism

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of plant hormones

Metabolic pathways

225346_at 0.440 6.759 2.871 1.153e-02 0.176 -2.853 MTERFD3 MTERF domain containing 3 12 -105895198 NM_025198 12q24.1 Hs.5009 6

mitochondrion

transcription termination

regulation of transcription

 
1569909_at 0.315 4.352 2.871 1.153e-02 0.176 -2.853 KRT79 keratin 79 12 -51501497 BC039148 12q13.13 Hs.711471 3

structural molecule activity

keratin filament

 
211716_x_at 0.256 6.781 2.870 1.154e-02 0.176 -2.854 ARHGDIA Rho GDP dissociation inhibitor (GDI) alpha 17 -77418885 BC005851 17q25.3 Hs.159161 38

Rho GDP-dissociation inhibitor activity

GTPase activator activity

cytoplasm

cytoskeleton

anti-apoptosis

cell motion

negative regulation of cell adhesion

Rho protein signal transduction

identical protein binding

Neurotrophin signaling pathway

227685_at -0.588 6.210 -2.870 1.155e-02 0.176 -2.854 TMF1 TATA element modulatory factor 1 3 -69151667 AI767750 3p21-p12 Hs.267632 15

Golgi membrane

DNA binding

RNA polymerase II transcription factor activity

transcription cofactor activity

protein binding

nucleus

cytoplasm

Golgi apparatus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

membrane

 
227859_at -0.381 6.463 -2.870 1.156e-02 0.177 -2.855 DNAJC27 DnaJ (Hsp40) homolog, subfamily C, member 27 2 -25020008 AV706343 2p23.3 Hs.434993 4

nucleotide binding

GTP binding

small GTPase mediated signal transduction

heat shock protein binding

 
201722_s_at -0.520 8.042 -2.870 1.156e-02 0.177 -2.855 GALNT1 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) 18 31488530 AV692127 18q12.1 Hs.514806 26

polypeptide N-acetylgalactosaminyltransferase activity

calcium ion binding

sugar binding

extracellular region

Golgi apparatus

membrane

integral to membrane

transferase activity, transferring glycosyl groups

protein amino acid O-linked glycosylation via serine

protein amino acid O-linked glycosylation via threonine

manganese ion binding

perinuclear region of cytoplasm

O-Glycan biosynthesis

Metabolic pathways

227307_at 0.396 6.044 2.870 1.156e-02 0.177 -2.855 TSPAN18 tetraspanin 18 11 44838454, 44884532 AL565381 11p11.2 Hs.385634 Hs.638940 6

membrane

integral to membrane

 
1570183_at -0.218 2.139 -2.869 1.158e-02 0.177 -2.857 FBXO34 F-box protein 34 14 54807773, 54808624 BC020583 14q22.3 Hs.525348 Hs.654725 9

protein transport

modification-dependent protein catabolic process

 
203352_at -0.451 5.587 -2.869 1.158e-02 0.177 -2.857 ORC4L origin recognition complex, subunit 4-like (yeast) 2 -148408201, -148408201 NM_002552 2q22-q23 Hs.558364 29

nucleotide binding

DNA binding

DNA replication origin binding

protein binding

ATP binding

nucleus

nucleoplasm

DNA replication

DNA replication

DNA replication initiation

nucleoside-triphosphatase activity

Cell cycle

1554026_a_at 0.271 4.354 2.869 1.159e-02 0.177 -2.857 MYO10 myosin X 5 -16715015 BC041694 5p15.1-p14.3 Hs.481720 19

nucleotide binding

motor activity

actin binding

ATP binding

cytoskeleton

signal transduction

myosin complex

Fc gamma R-mediated phagocytosis

225643_at -0.364 7.374 -2.868 1.159e-02 0.177 -2.857 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1-like 14 54588114 AI261542 14q22.3 Hs.594338 Hs.619374 8    
234405_s_at -0.490 6.798 -2.868 1.160e-02 0.177 -2.858 PHAX phosphorylated adaptor for RNA export 5 125964531 AK024065 5q23.2 Hs.555731 Hs.719165 10

spliceosomal snRNP biogenesis

RNA binding

protein binding

nucleus

nucleoplasm

nucleoplasm

cytoplasm

cytosol

snRNA export from nucleus

Cajal body

protein transport

 
201315_x_at 0.459 8.833 2.868 1.161e-02 0.177 -2.859 IFITM2 interferon induced transmembrane protein 2 (1-8D) 11 298106 NM_006435 11p15.5 Hs.709321 6

protein binding

immune response

response to biotic stimulus

membrane

integral to membrane

 
212696_s_at -0.260 7.542 -2.867 1.162e-02 0.177 -2.859 RNF4 ring finger protein 4 4 2440604 BF968633 4p16.3 Hs.66394 19

transcription factor activity

transcription coactivator activity

protein binding

nucleus

cytoplasm

regulation of transcription from RNA polymerase II promoter

zinc ion binding

androgen receptor signaling pathway

regulation of transcription

positive regulation of transcription, DNA-dependent

metal ion binding

androgen receptor binding

 
221666_s_at 0.369 5.140 2.867 1.162e-02 0.177 -2.860 PYCARD PYD and CARD domain containing 16 -31120307 BC004470 16p12-p11.2 Hs.499094 56

cysteine-type endopeptidase activity

protein binding

intracellular

cytoplasm

proteolysis

induction of apoptosis

activation of caspase activity

signal transduction

IkappaB kinase complex

caspase activator activity

Pyrin domain binding

tumor necrosis factor-mediated signaling pathway

protein homodimerization activity

regulation of apoptosis

positive regulation of interleukin-1 beta secretion

positive regulation of NF-kappaB transcription factor activity

 
232003_at 0.197 5.310 2.867 1.162e-02 0.177 -2.860 PNMAL2 PNMA-like 2 19 -51686287 AW299761 19q13.32 Hs.7193 3    
243_g_at -0.470 9.788 -2.866 1.165e-02 0.177 -2.862 MAP4 microtubule-associated protein 4 3 -47989573, -47867183, -47867183 M64571 3p21 Hs.517949 40

structural molecule activity

protein binding

microtubule

microtubule associated complex

negative regulation of microtubule depolymerization

 
200037_s_at -0.317 9.593 -2.866 1.166e-02 0.177 -2.862 CBX3 chromobox homolog 3 (HP1 gamma homolog, Drosophila) 7 26207623, 26207848 NM_016587 7p15.2 Hs.381189 Hs.706294 45

condensed chromosome, centromeric region

chromatin

chromatin binding

nucleus

nuclear inner membrane

polytene chromosome chromocenter

nuclear euchromatin

spindle

chromatin assembly or disassembly

chromatin remodeling

negative regulation of transcription

general transcriptional repressor activity

enzyme binding

protein domain specific binding

nuclear centromeric heterochromatin

 
221873_at -0.383 6.635 -2.866 1.166e-02 0.177 -2.863 ZNF143 zinc finger protein 143 11 9439088 AW162015 11p15.4 Hs.523471 14

DNA binding

specific RNA polymerase II transcription factor activity

RNA polymerase III transcription factor activity

intracellular

nucleus

regulation of transcription from RNA polymerase II promoter

regulation of transcription from RNA polymerase III promoter

zinc ion binding

regulation of transcription

metal ion binding

 
211908_x_at 0.286 5.897 2.865 1.167e-02 0.177 -2.863 IGHG1 immunoglobulin heavy constant gamma 1 (G1m marker) 14   M87268 14q32.33 Hs.510635 29

antigen binding

protein binding

extracellular region

membrane fraction

immune response

 
219689_at 0.666 6.378 2.865 1.167e-02 0.177 -2.864 SEMA3G sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G 3 -52442307 NM_020163 3p21.1 Hs.59729 6

receptor activity

extracellular region

multicellular organismal development

membrane

Axon guidance

236930_at -0.335 3.244 -2.864 1.169e-02 0.177 -2.865 NUMB numb homolog (Drosophila) 14 -72811670 AW167424 14q24.3 Hs.654609 Hs.714879 40

protein binding

integral to plasma membrane

multicellular organismal development

membrane

Notch signaling pathway

213974_at 0.407 5.344 2.864 1.169e-02 0.177 -2.865 ADAMTSL3 ADAMTS-like 3 15 82113841 AB033059 15q25.2 Hs.459162 11

extracellular region

proteinaceous extracellular matrix

peptidase activity

metallopeptidase activity

zinc ion binding

 
227961_at -0.373 7.808 -2.864 1.169e-02 0.177 -2.865 CTSB cathepsin B 8 -11737442 AA130998 8p22 Hs.520898 140

cysteine-type endopeptidase activity

extracellular region

intracellular

soluble fraction

mitochondrion

lysosome

proteolysis

peptidase activity

response to wounding

external side of plasma membrane

apical plasma membrane

kininogen binding

peptide binding

melanosome

regulation of apoptosis

regulation of catalytic activity

Lysosome

Antigen processing and presentation

226157_at -0.434 7.296 -2.864 1.171e-02 0.177 -2.866 TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) 3 -143154017 AI569747 3q23 Hs.379018 14

transcription factor activity

transcription cofactor activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

cell cycle

protein domain specific binding

Cell cycle

226851_at 0.458 7.981 2.864 1.171e-02 0.177 -2.866 LYPLAL1 lysophospholipase-like 1 1 217413814 AW612657 1q41 Hs.657617 6

lysophospholipase activity

cellular_component

cytoplasm

biological_process

hydrolase activity

 
1552364_s_at -0.353 5.143 -2.863 1.171e-02 0.177 -2.867 MSI2 musashi homolog 2 (Drosophila) 17 52688929, 52689372 BC001526 17q22 Hs.658922 7

nucleotide binding

RNA binding

cytoplasm

 
203810_at -0.600 8.517 -2.863 1.173e-02 0.178 -2.868 DNAJB4 DnaJ (Hsp40) homolog, subfamily B, member 4 1 78243223 BG252490 1p31.1 Hs.13852 11

protein folding

response to unfolded protein

response to heat

heat shock protein binding

unfolded protein binding

 
209704_at -0.440 4.355 -2.863 1.173e-02 0.178 -2.868 MTF2 metal response element binding transcription factor 2 1 93317379 AL523380 1p22.1 Hs.31016 5

DNA binding

protein binding

nucleus

zinc ion binding

metal ion binding

 
204304_s_at 0.758 4.200 2.863 1.173e-02 0.178 -2.868 PROM1 prominin 1 4 -15578946, -15578946, -15578946 NM_006017 4p15.32 Hs.614734 81

extracellular space

plasma membrane

integral to plasma membrane

brush border

visual perception

cell surface

apical plasma membrane

stereocilium

response to stimulus

 
201816_s_at -0.367 11.867 -2.863 1.173e-02 0.178 -2.868 GBAS glioblastoma amplified sequence 7 55999789 NM_001483 7p12 Hs.591069 9

membrane fraction

mitochondrion

integral to plasma membrane

 
214835_s_at -0.390 9.573 -2.862 1.175e-02 0.178 -2.870 SUCLG2 succinate-CoA ligase, GDP-forming, beta subunit 3 -67507832 AF131748 3p14.1 Hs.655250 8

nucleotide binding

succinate-CoA ligase (GDP-forming) activity

ATP binding

GTP binding

mitochondrion

mitochondrial matrix

tricarboxylic acid cycle

succinyl-CoA metabolic process

metabolic process

ligase activity

Citrate cycle (TCA cycle)

Propanoate metabolism

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

212328_at -0.373 9.315 -2.861 1.176e-02 0.178 -2.870 LIMCH1 LIM and calponin homology domains 1 4 41057560, 41309675 AB029025 4p13 Hs.335163 10

actin binding

zinc ion binding

actomyosin structure organization

metal ion binding

 
206363_at -0.590 7.545 -2.861 1.176e-02 0.178 -2.870 MAF v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) 16 -78185246 NM_005360 16q22-q23 Hs.134859 37

chromatin

cytokine production

transcription factor activity

RNA polymerase II transcription factor activity

protein binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

regulation of chondrocyte differentiation

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

cell development

lens fiber cell differentiation

 
201636_at -0.415 11.014 -2.861 1.176e-02 0.178 -2.871 FXR1 fragile X mental retardation, autosomal homolog 1 3 182113145 BG025078 3q28 Hs.478407 30

RNA binding

nucleolus

cytoplasm

polysome

apoptosis

multicellular organismal development

muscle organ development

cell differentiation

 
204723_at 0.812 5.615 2.861 1.176e-02 0.178 -2.871 SCN3B sodium channel, voltage-gated, type III, beta 11 -123005104 AB032984 11q23.3 Hs.4865 19

voltage-gated ion channel activity

voltage-gated sodium channel activity

plasma membrane

ion transport

sodium ion transport

integral to membrane

sodium ion binding

 
1558706_a_at 1.002 5.204 2.861 1.178e-02 0.178 -2.872 ATOH8 atonal homolog 8 (Drosophila) 2 85834419 AL831857 2p11.2 Hs.135569 Hs.436464 5

DNA binding

nucleus

multicellular organismal development

nervous system development

cell differentiation

transcription regulator activity

regulation of transcription

 
240098_at 0.318 5.517 2.861 1.178e-02 0.178 -2.872 RIF1 RAP1 interacting factor homolog (yeast) 2 151974673 AI168689 2q23.3 Hs.655671 10

chromosome, telomeric region

female pronucleus

male pronucleus

binding

nucleus

chromosome

response to DNA damage stimulus

cell cycle

stem cell maintenance

 
1562625_at -0.318 3.701 -2.859 1.181e-02 0.178 -2.874 FRYL FRY-like 4 -48194136 BC040987 4p11 Hs.631525 8

protein binding

regulation of transcription

 
238911_at 0.284 5.103 2.859 1.181e-02 0.178 -2.875 STARD10 StAR-related lipid transfer (START) domain containing 10 11 -72143421 AW328672 11q13 Hs.188606 8    
225566_at 0.380 4.850 2.859 1.182e-02 0.178 -2.875 NRP2 neuropilin 2 2 206255468, 206255468, 206255468 AI819729 2q33.3 Hs.471200 44

receptor activity

vascular endothelial growth factor receptor activity

membrane fraction

plasma membrane

cell adhesion

multicellular organismal development

nervous system development

axon guidance

integral to membrane

cell differentiation

 
220741_s_at 0.253 9.050 2.858 1.184e-02 0.178 -2.876 PPA2 pyrophosphatase (inorganic) 2 4 -106509682 NM_006903 4q25 Hs.654957 13

magnesium ion binding

inorganic diphosphatase activity

cytoplasm

mitochondrion

phosphate metabolic process

hydrolase activity

Oxidative phosphorylation

215203_at -0.677 7.692 -2.858 1.184e-02 0.178 -2.877 GOLGA4 golgi autoantigen, golgin subfamily a, 4 3 37259741 AW438464 3p22-p21.3 Hs.344151 21

cytoplasm

Golgi apparatus

trans-Golgi network

membrane

vesicle-mediated transport

 
202465_at 0.536 6.353 2.858 1.184e-02 0.178 -2.877 PCOLCE procollagen C-endopeptidase enhancer 7 100037817 NM_002593 7q22 Hs.202097 18

protein binding

extracellular region

multicellular organismal development

 
233880_at 0.263 4.869 2.858 1.184e-02 0.178 -2.877 RNF213 ring finger protein 213 17 75928320 AL161961 17q25.3 Hs.195642 Hs.657519 6

nucleotide binding

protein binding

zinc ion binding

nucleoside-triphosphatase activity

metal ion binding

 
210720_s_at 0.354 7.677 2.857 1.186e-02 0.179 -2.878 NECAB3 N-terminal EF-hand calcium binding protein 3 20 -31708553 AB039947 20q11.22 Hs.516986 11

Golgi cis cisterna

Golgi cis cisterna

calcium ion binding

protein binding

protein binding

protein binding

nucleus

cytoplasm

cytoplasm

endoplasmic reticulum membrane

endoplasmic reticulum membrane

Golgi apparatus

protein secretion

oxidoreductase activity

antibiotic biosynthetic process

protein metabolic process

protein metabolic process

regulation of amyloid precursor protein biosynthetic process

 
211744_s_at -0.432 5.471 -2.857 1.187e-02 0.179 -2.879 CD58 CD58 molecule 1 -116862845, -116858679 BC005930 1p13 Hs.34341 38

protein binding

plasma membrane

integral to plasma membrane

cell-cell adhesion

anchored to membrane

Cell adhesion molecules (CAMs)

205862_at 0.724 4.545 2.857 1.187e-02 0.179 -2.879 GREB1 GREB1 protein 2 11591692, 11597530, 11600301 NM_014668 2p25.1 Hs.467733 11

membrane

integral to membrane

 
218890_x_at 0.710 8.628 2.857 1.188e-02 0.179 -2.879 MRPL35 mitochondrial ribosomal protein L35 2 86280066 NM_016622 2p11.2 Hs.433439 8

structural constituent of ribosome

mitochondrion

mitochondrial ribosome

ribosome

translation

translation regulator activity

 
205333_s_at 0.241 5.335 2.856 1.190e-02 0.179 -2.881 RCE1 RCE1 homolog, prenyl protein peptidase (S. cerevisiae) 11 66367458 NM_005133 11q13 Hs.654972 9

metalloendopeptidase activity

endoplasmic reticulum

integral to plasma membrane

proteolysis

membrane

hydrolase activity

 
242287_at -0.546 6.343 -2.856 1.190e-02 0.179 -2.881 CLIP1 CAP-GLY domain containing linker protein 1 12 -121321933 AI090487 12q24.3 Hs.524809 37

kinetochore

nucleic acid binding

protein binding

cytoplasm

endosome

microtubule

intermediate filament

mitosis

microtubule binding

zinc ion binding

protein homodimerization activity

metal ion binding

 
206876_at -1.105 5.968 -2.855 1.191e-02 0.179 -2.882 SIM1 single-minded homolog 1 (Drosophila) 6 -100943470 AL121948 6q16.3-q21 Hs.520293 17

transcription factor activity

signal transducer activity

protein binding

nucleus

Golgi apparatus

regulation of transcription, DNA-dependent

signal transduction

multicellular organismal development

nervous system development

cell differentiation

protein heterodimerization activity

 
221749_at -0.327 9.188 -2.855 1.192e-02 0.179 -2.883 YTHDF3 YTH domain family, member 3 8 64243674 AU157915 8q12.3 Hs.491861 9

cytoplasm

 
225838_at -0.563 6.667 -2.855 1.193e-02 0.179 -2.883 EPC2 enhancer of polycomb homolog 2 (Drosophila) 2 149119029 AK002010 2q23.1 Hs.23270 7

nucleus

DNA repair

response to DNA damage stimulus

chromatin modification

regulation of transcription

 
209019_s_at -0.340 10.140 -2.854 1.193e-02 0.179 -2.883 PINK1 PTEN induced putative kinase 1 1 20832534 AF316873 1p36 Hs.389171 105

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

ATP binding

mitochondrion

mitochondrial outer membrane

protein amino acid phosphorylation

response to stress

protein kinase cascade

membrane

integral to membrane

transferase activity

positive regulation of synaptic transmission, dopaminergic

positive regulation of dopamine secretion

Parkinson's disease

235272_at 0.288 4.572 2.854 1.193e-02 0.179 -2.883 SBSN suprabasin 19 -40706110 AI814274 19q13.13 Hs.433484 5

extracellular region

cytoplasm

 
227438_at 0.340 5.751 2.854 1.194e-02 0.179 -2.884 ALPK1 alpha-kinase 1 4 113437947 AI760166 4q25 Hs.652825 10

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

kinase activity

transferase activity

 
204369_at -0.548 5.570 -2.854 1.195e-02 0.179 -2.885 PIK3CA phosphoinositide-3-kinase, catalytic, alpha polypeptide 3 180349004 NM_006218 3q26.3 Hs.553498 Hs.85701 259

nucleotide binding

inositol or phosphatidylinositol kinase activity

ATP binding

cytosol

phosphoinositide 3-kinase complex

glucose metabolic process

protein amino acid phosphorylation

anti-apoptosis

signal transduction

1-phosphatidylinositol-3-kinase activity

transferase activity

phosphotransferase activity, alcohol group as acceptor

lamellipodium

regulation of multicellular organism growth

protein kinase B signaling cascade

insulin receptor substrate binding

phosphoinositide phosphorylation

phosphatidylinositol-4,5-bisphosphate 3-kinase activity

phosphatidylinositol-4,5-bisphosphate 3-kinase activity

phosphoinositide-mediated signaling

Inositol phosphate metabolism

ErbB signaling pathway

Chemokine signaling pathway

Phosphatidylinositol signaling system

mTOR signaling pathway

Apoptosis

VEGF signaling pathway

Focal adhesion

Toll-like receptor signaling pathway

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Insulin signaling pathway

Type II diabetes mellitus

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Chronic myeloid leukemia

Acute myeloid leukemia

Small cell lung cancer

Non-small cell lung cancer

228521_s_at 0.370 6.411 2.854 1.195e-02 0.179 -2.885 RAB4B RAB4B, member RAS oncogene family 19 45976010 AW242973 19q13.2 Hs.631539 5

nucleotide binding

GTPase activity

GTP binding

intracellular

plasma membrane

small GTPase mediated signal transduction

protein transport

vesicle-mediated transport

 
1558486_at 0.430 5.671 2.853 1.196e-02 0.179 -2.886 ZNF493 zinc finger protein 493 19 21371760, 21371760 BC022394 19p12 Hs.656558 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
221408_x_at 0.341 4.787 2.853 1.196e-02 0.179 -2.886 PCDHB12 protocadherin beta 12 5 140568474 NM_018932 5q31 Hs.429820 Hs.719589 8

calcium ion binding

protein binding

plasma membrane

integral to plasma membrane

cell adhesion

homophilic cell adhesion

nervous system development

 
1563455_at -0.428 4.903 -2.852 1.198e-02 0.179 -2.888 QSK serine/threonine-protein kinase QSK 11 -116219327 AL832068 11q23.3 Hs.167451 14

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

transferase activity

 
212232_at -0.549 8.111 -2.852 1.199e-02 0.179 -2.888 FNBP4 formin binding protein 4 11 -47694644 AB023231 11p11.2 Hs.6834 11

protein binding

 
226612_at -0.638 8.605 -2.852 1.199e-02 0.179 -2.888 FLJ25076 probable ubiquitin-conjugating enzyme E2 FLJ25076 5 6501735 H17038 5p15.31 Hs.126856 3

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

 
223981_at -0.417 4.197 -2.851 1.202e-02 0.180 -2.891 NIN ninein (GSK3B interacting protein) 14 -50263700, -50262296, -50262296, -50256230 AF223937 14q22.1 Hs.310429 23

nucleotide binding

protein binding

GTP binding

centrosome

microtubule

centrosome localization

 
238356_at 0.251 2.791 2.850 1.202e-02 0.180 -2.891 DOCK11 dedicator of cytokinesis 11 X 117513899 AW968823 Xq24 Hs.368203 4

guanyl-nucleotide exchange factor activity

GTP binding

GTPase binding

 
209106_at -0.372 7.862 -2.850 1.203e-02 0.180 -2.891 NCOA1 nuclear receptor coactivator 1 2 24660849 BF576458 2p23 Hs.596314 123

DNA binding

chromatin binding

transcription coactivator activity

histone acetyltransferase activity

signal transducer activity

nucleus

signal transduction

acyltransferase activity

transferase activity

androgen receptor signaling pathway

transcription regulator activity

nuclear hormone receptor binding

positive regulation of transcription from RNA polymerase II promoter

protein N-terminus binding

androgen receptor binding

 
227780_s_at 0.336 6.601 2.850 1.203e-02 0.180 -2.891 ECSCR endothelial cell-specific chemotaxis regulator 5 -138812143 AI422211 5q31.2 Hs.483538 Hs.570903 5

angiogenesis

plasma membrane

chemotaxis

multicellular organismal development

integral to membrane

cell differentiation

 
218857_s_at 0.413 6.547 2.850 1.203e-02 0.180 -2.891 ASRGL1 asparaginase like 1 11 61861349 NM_025080 11q12.3 Hs.535326 9

N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity

cytoplasm

hydrolase activity

asparagine catabolic process via L-aspartate

Alanine, aspartate and glutamate metabolism

Cyanoamino acid metabolism

Nitrogen metabolism

Metabolic pathways

223879_s_at -0.599 7.518 -2.850 1.204e-02 0.180 -2.892 OXR1 oxidation resistance 1 8 107351648, 107739211 AF309387 8q23 Hs.148778 11

molecular_function

cellular_component

nucleolus

mitochondrion

response to oxidative stress

cell wall macromolecule catabolic process

 
229573_at -0.516 6.310 -2.849 1.206e-02 0.180 -2.893 USP9X ubiquitin specific peptidase 9, X-linked X 40829831 AI659456 Xp11.4 Hs.77578 24

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

protein binding

cytoplasm

ubiquitin-dependent protein catabolic process

transforming growth factor beta receptor signaling pathway

female gamete generation

peptidase activity

protein deubiquitination

BMP signaling pathway

co-SMAD binding

 
210305_at -0.882 11.233 -2.849 1.207e-02 0.180 -2.894 PDE4DIP phosphodiesterase 4D interacting protein 1 -143663117, -143663117, -143601947, -143601947, -143562783 AB042557 1q12 Hs.584841 Hs.613082 Hs.657186 Hs.657490 Hs.719077 10

nucleus

cytoplasm

Golgi apparatus

centrosome

 
227029_at -0.612 7.302 -2.849 1.207e-02 0.180 -2.894 FAM177A1 family with sequence similarity 177, member A1 14 34583863, 34585360 AI949662 14q13.2 Hs.446357 3    
213225_at -0.490 9.042 -2.848 1.208e-02 0.180 -2.895 PPM1B protein phosphatase 1B (formerly 2C), magnesium-dependent, beta isoform 2 44249503, 44249503, 44249503 AJ271832 2p21 Hs.416769 17

magnesium ion binding

protein serine/threonine phosphatase activity

protein binding

protein amino acid dephosphorylation

protein serine/threonine phosphatase complex

hydrolase activity

manganese ion binding

MAPK signaling pathway

226082_s_at -0.382 6.250 -2.848 1.208e-02 0.180 -2.895 SFRS15 splicing factor, arginine/serine-rich 15 21 -31965183 AW513629 21q22.1 Hs.17255 12

nucleotide binding

RNA binding

nucleus

nucleolus

mRNA processing

protein C-terminus binding

 
218066_at 0.338 6.789 2.848 1.209e-02 0.180 -2.896 SLC12A7 solute carrier family 12 (potassium/chloride transporters), member 7 5 -1103488 NM_006598 5p15 Hs.172613 13

transporter activity

integral to plasma membrane

ion transport

potassium ion transport

sodium ion transport

chloride transport

symporter activity

potassium:chloride symporter activity

membrane

potassium ion binding

 
216513_at -0.309 2.907 -2.847 1.210e-02 0.180 -2.897 DCT dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2) 13 -93889841 AL139318 13q32 Hs.301865 41

dopachrome isomerase activity

copper ion binding

microsome

cytosol

melanin biosynthetic process from tyrosine

metabolic process

zinc ion binding

epidermis development

membrane

integral to membrane

oxidoreductase activity

isomerase activity

melanosome

metal ion binding

pigmentation during development

cell development

Tyrosine metabolism

Metabolic pathways

Melanogenesis

225913_at 0.284 7.846 2.847 1.211e-02 0.180 -2.897 SGK269 NKF3 kinase family member 15 -75187525 AK025943 15q24.3 Hs.9587 7

nucleotide binding

non-membrane spanning protein tyrosine kinase activity

ATP binding

protein amino acid phosphorylation

transferase activity

 
225726_s_at 0.693 5.398 2.846 1.213e-02 0.180 -2.899 PLEKHH1 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 14 67069760 AB033026 14q24.1 Hs.594236 4

binding

cytoskeleton

 
213426_s_at 0.255 4.351 2.846 1.214e-02 0.180 -2.899 CAV2 caveolin 2 7 115926679 AA150110 7q31.1 Hs.212332 Hs.603096 50

negative regulation of endothelial cell proliferation

protein binding

intracellular

Golgi apparatus

plasma membrane

integral to plasma membrane

caveola

vesicle fusion

mitochondrion organization

endoplasmic reticulum organization

transport vesicle

protein homodimerization activity

vesicle docking

perinuclear region of cytoplasm

skeletal muscle fiber development

protein oligomerization

Focal adhesion

203748_x_at 0.288 7.716 2.846 1.214e-02 0.180 -2.900 RBMS1 RNA binding motif, single stranded interacting protein 1 2 -160836908 NM_016839 2q24.2 Hs.470412 12

DNA binding

double-stranded DNA binding

single-stranded DNA binding

RNA binding

cellular_component

nucleus

DNA replication

RNA processing

 
235981_at -1.937 10.437 -2.846 1.214e-02 0.180 -2.900 C8orf22 chromosome 8 open reading frame 22 8 50147455 N70563 8q11 Hs.49890 2    
214265_at 0.322 5.193 2.845 1.216e-02 0.180 -2.901 ITGA8 integrin, alpha 8 10 -15599093 AI193623 10p13 Hs.171311 15

metanephros development

receptor activity

calcium ion binding

protein binding

cell-matrix adhesion

integrin-mediated signaling pathway

multicellular organismal development

nervous system development

memory

integrin complex

membrane

integral to membrane

cell-cell adhesion

cell projection organization

cell differentiation

extracellular matrix organization

positive regulation of transforming growth factor beta receptor signaling pathway

inner ear morphogenesis

apical part of cell

Focal adhesion

ECM-receptor interaction

Cell adhesion molecules (CAMs)

Regulation of actin cytoskeleton

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

242734_x_at 0.310 4.583 2.845 1.216e-02 0.180 -2.901 GALT galactose-1-phosphate uridylyltransferase 9 34636634 BF002568 9p13 Hs.522090 72

iron ion binding

cytosol

carbohydrate metabolic process

galactose metabolic process

UDP-glucose:hexose-1-phosphate uridylyltransferase activity

UDP-glucose:hexose-1-phosphate uridylyltransferase activity

zinc ion binding

transferase activity

nucleotidyltransferase activity

metal ion binding

Galactose metabolism

Amino sugar and nucleotide sugar metabolism

Metabolic pathways

226992_at 0.519 5.455 2.845 1.217e-02 0.180 -2.902 NOSTRIN nitric oxide synthase trafficker 2 169367352, 169367398 AK002203 2q24.3-q31.1 Hs.189780 9

protein binding

cytoplasm

cytoskeleton

plasma membrane

plasma membrane

endocytosis

cytoplasmic vesicle

 
223535_at -0.387 6.031 -2.845 1.217e-02 0.180 -2.902 NUDT12 nudix (nucleoside diphosphate linked moiety X)-type motif 12 5 -102912454 AL136592 5q21.2 Hs.434289 9

NAD+ diphosphatase activity

magnesium ion binding

nucleus

peroxisome

hydrolase activity

manganese ion binding

Nicotinate and nicotinamide metabolism

231112_at -0.257 4.803 -2.844 1.217e-02 0.180 -2.902 SNRPE small nuclear ribonucleoprotein polypeptide E 1 202097362 AU144102 1q32 Hs.334612 Hs.654418 43

spliceosome assembly

spliceosomal snRNP biogenesis

RNA binding

protein binding

nucleus

nucleoplasm

spliceosomal complex

cytosol

RNA splicing

small nuclear ribonucleoprotein complex

 
242944_at 0.190 6.214 2.844 1.217e-02 0.180 -2.902 FAM83A family with sequence similarity 83, member A 8 124263932, 124263932 BG438092 8q24.13 Hs.379821 4    
204265_s_at 0.330 5.870 2.844 1.217e-02 0.180 -2.902 GPSM3 G-protein signaling modulator 3 (AGS3-like, C. elegans) 6 -32266520, -3565727, -3373507 NM_022107 6p21.3 Hs.520046 7

molecular_function

GTPase activator activity

protein binding

cellular_component

cytoplasm

signal transduction

biological_process

 
203446_s_at -0.302 5.961 -2.844 1.218e-02 0.180 -2.902 OCRL oculocerebrorenal syndrome of Lowe X 128501932 NM_000276 Xq25-q26.1 Hs.126357 36

inositol or phosphatidylinositol phosphatase activity

phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity

intracellular

Golgi stack

Golgi-associated vesicle

lipid metabolic process

signal transduction

hydrolase activity

Inositol phosphate metabolism

Metabolic pathways

Phosphatidylinositol signaling system

213112_s_at -0.375 6.377 -2.844 1.218e-02 0.180 -2.902 SQSTM1 sequestosome 1 5 179165993, 179166608, 179180447 N30649 5q35 Hs.437277 100

protein kinase C binding

protein binding

nucleus

cytoplasm

late endosome

cytosol

cytosol

ubiquitin-dependent protein catabolic process

apoptosis

response to stress

immune response

intracellular signaling cascade

protein localization

zinc ion binding

endosome transport

cell differentiation

receptor tyrosine kinase binding

SH2 domain binding

SH2 domain binding

regulation of I-kappaB kinase/NF-kappaB cascade

regulation of I-kappaB kinase/NF-kappaB cascade

ubiquitin binding

ubiquitin binding

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

 
223269_at -0.281 8.630 -2.844 1.219e-02 0.180 -2.903 POLR3GL polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like 1 -144167592 BC004355 1q21.1 Hs.591456 2  

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

238975_at 0.341 4.701 2.844 1.219e-02 0.180 -2.903 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 12 -108475903 AI671390 12q24 Hs.12106 16

nucleotide binding

ATP binding

mitochondrion

cob(I)yrinic acid a,c-diamide adenosyltransferase activity

cobalamin biosynthetic process

transferase activity

Porphyrin and chlorophyll metabolism

Metabolic pathways

209573_s_at 0.270 5.840 2.843 1.220e-02 0.180 -2.904 C18orf1 chromosome 18 open reading frame 1 18 13208785, 13601664, 13610866 AW008505 18p11.2 Hs.149363 9

molecular_function

plasma membrane

biological_process

integral to membrane

 
223070_at -0.455 10.146 -2.843 1.220e-02 0.180 -2.904 SELK selenoprotein K 3 -53894265 AF085359 3p21.31 Hs.58471 Hs.640242 7

endoplasmic reticulum

response to oxidative stress

selenium binding

 
205757_at 0.229 4.339 2.843 1.221e-02 0.181 -2.904 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 14 -73502935 NM_001249 14q24 Hs.131555 14

magnesium ion binding

calcium ion binding

endoplasmic reticulum

endoplasmic reticulum lumen

hydrolase activity

nucleoside-diphosphatase activity

Purine metabolism

Pyrimidine metabolism

206061_s_at -0.522 5.748 -2.843 1.221e-02 0.181 -2.904 DICER1 dicer 1, ribonuclease type III 14 -94622317, -94622317 NM_030621 14q32.13 Hs.87889 63

nucleotide binding

magnesium ion binding

angiogenesis

double-stranded RNA binding

helicase activity

endonuclease activity

ribonuclease III activity

protein binding

ATP binding

intracellular

cytoplasm

RNA processing

ATP-dependent helicase activity

RNA-induced silencing complex

hydrolase activity

stem cell maintenance

manganese ion binding

lung development

RNA interference, production of siRNA

RNA interference, targeting of mRNA for destruction

gene silencing by RNA

pre-microRNA processing

embryonic hindlimb morphogenesis

branching morphogenesis of a tube

 
240110_at 0.506 4.433 2.843 1.222e-02 0.181 -2.905 HMGCS2 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 (mitochondrial) 1 -120092525 AI090874 1p13-p12 Hs.59889 13

hydroxymethylglutaryl-CoA synthase activity

hydroxymethylglutaryl-CoA synthase activity

mitochondrion

mitochondrial inner membrane

mitochondrial matrix

cholesterol biosynthetic process

response to nutrient

metabolic process

isoprenoid biosynthetic process

transferase activity

response to drug

response to peptide hormone stimulus

Synthesis and degradation of ketone bodies

Valine, leucine and isoleucine degradation

Butanoate metabolism

Terpenoid backbone biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

PPAR signaling pathway

200850_s_at -0.468 8.902 -2.843 1.222e-02 0.181 -2.906 AHCYL1 adenosylhomocysteinase-like 1 1 110328830 NM_006621 1p13.2 Hs.705418 15

adenosylhomocysteinase activity

binding

endoplasmic reticulum

one-carbon metabolic process

metabolic process

hydrolase activity

Cysteine and methionine metabolism

Selenoamino acid metabolism

Metabolic pathways

213453_x_at -0.235 13.645 -2.842 1.222e-02 0.181 -2.906 GAPDH glyceraldehyde-3-phosphate dehydrogenase 12 6513917 BF689355 12p13 Hs.544577 Hs.592355 Hs.598320 130

glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity

protein binding

cytoplasm

glucose metabolic process

glycolysis

membrane

oxidoreductase activity

perinuclear region of cytoplasm

NAD or NADH binding

oxidation reduction

Glycolysis / Gluconeogenesis

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

Alzheimer's disease

235003_at -0.446 4.461 -2.842 1.223e-02 0.181 -2.906 UHMK1 U2AF homology motif (UHM) kinase 1 1 160734278 AI249980 1q23.3 Hs.127310 13

nucleotide binding

RNA binding

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

cytoplasm

cell cycle arrest

transferase activity

peptidyl-serine phosphorylation

protein amino acid autophosphorylation

regulation of protein export from nucleus

 
209377_s_at -0.355 10.558 -2.842 1.223e-02 0.181 -2.906 HMGN3 high mobility group nucleosomal binding domain 3 6 -79967680 AF274949 6q14.1 Hs.77558 9

chromatin

DNA binding

protein binding

nucleus

biological_process

thyroid hormone receptor binding

 
212067_s_at 0.678 6.938 2.842 1.224e-02 0.181 -2.907 C1R complement component 1, r subcomponent 12 -7057769 AL573058 12p13 Hs.524224 37

serine-type endopeptidase activity

calcium ion binding

extracellular region

extracellular region

proteolysis

complement activation, classical pathway

peptidase activity

innate immune response

Complement and coagulation cascades

Systemic lupus erythematosus

205398_s_at 0.262 6.763 2.841 1.225e-02 0.181 -2.908 SMAD3 SMAD family member 3 15 65145248, 65205107, 65217412, 65245546 NM_005902 15q22.33 Hs.714621 Hs.718953 271

negative regulation of transcription from RNA polymerase II promoter

response to hypoxia

mesoderm formation

osteoblast development

double-stranded DNA binding

transcription factor activity

transforming growth factor beta receptor binding

collagen binding

intracellular

nucleus

nucleoplasm

transcription factor complex

cytoplasm

cytosol

plasma membrane

induction of apoptosis

activation of caspase activity

cell cycle arrest

SMAD protein complex assembly

transcription factor binding

positive regulation of epithelial to mesenchymal transition

promoter binding

transport accessory protein activity

regulation of striated muscle tissue development

transcription activator activity

regulation of transforming growth factor beta receptor signaling pathway

evasion of host defenses by virus

negative regulation of cell growth

transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity

primary microRNA processing

ubiquitin protein ligase binding

regulation of transforming growth factor-beta2 production

wound healing

T cell activation

protein homodimerization activity

positive regulation of transcription factor import into nucleus

receptor complex

cell-cell junction organization

negative regulation of osteoblast differentiation

negative regulation of mitotic cell cycle

positive regulation of transcription from RNA polymerase II promoter

paraxial mesoderm morphogenesis

regulation of epithelial cell proliferation

regulation of immune response

regulation of binding

co-SMAD binding

R-SMAD binding

Cell cycle

Wnt signaling pathway

TGF-beta signaling pathway

Adherens junction

Pathways in cancer

Colorectal cancer

Pancreatic cancer

Chronic myeloid leukemia

1555962_at 0.279 3.339 2.841 1.225e-02 0.181 -2.908 B3GNT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 2 231968578 CA503291 2q37.1 Hs.299329 4

Golgi apparatus

protein amino acid glycosylation

galactosyltransferase activity

membrane

integral to membrane

transferase activity, transferring glycosyl groups

Keratan sulfate biosynthesis

Metabolic pathways

219804_at -0.512 10.192 -2.841 1.226e-02 0.181 -2.909 SYNPO2L synaptopodin 2-like 10 -75074649, -75074649 NM_024875 10q22.2 Hs.645273 4

actin binding

protein binding

cytoplasm

cytoskeleton

 
223880_x_at -0.463 10.902 -2.841 1.227e-02 0.181 -2.909 C20orf24 chromosome 20 open reading frame 24 20 34667580, 34667605 BC004446 20q11.23 Hs.584985 7

molecular_function

protein binding

cellular_component

biological_process

 
218872_at 0.280 5.610 2.840 1.227e-02 0.181 -2.909 TESC tescalcin 12 -115961110 NM_017899 12q24.22 Hs.525709 8

magnesium ion binding

ruffle

calcium ion binding

protein binding

nucleus

cytoplasm

phosphatase inhibitor activity

lamellipodium

 
221029_s_at 0.239 4.037 2.840 1.227e-02 0.181 -2.909 WNT5B wingless-type MMTV integration site family, member 5B 12 1596482, 1608672 NM_030775 12p13.3 Hs.306051 11

signal transducer activity

extracellular region

proteinaceous extracellular matrix

Wnt receptor signaling pathway, calcium modulating pathway

multicellular organismal development

Wnt signaling pathway

Hedgehog signaling pathway

Melanogenesis

Pathways in cancer

Basal cell carcinoma

1561414_at -0.233 2.143 -2.840 1.228e-02 0.181 -2.910 LOC401497 similar to PRO2738 9   BC022036 9p21.1 Hs.680131 1    
238117_at 0.432 3.644 2.840 1.228e-02 0.181 -2.910 PPOX protoporphyrinogen oxidase 1 159402804 AW615133 1q22 Hs.517373 32

oxygen-dependent protoporphyrinogen oxidase activity

oxygen-dependent protoporphyrinogen oxidase activity

mitochondrion

mitochondrial intermembrane space

heme biosynthetic process

electron carrier activity

membrane

oxidoreductase activity

intrinsic to mitochondrial inner membrane

FAD binding

oxidation reduction

Porphyrin and chlorophyll metabolism

Metabolic pathways

208911_s_at 0.280 10.061 2.840 1.228e-02 0.181 -2.910 PDHB pyruvate dehydrogenase (lipoamide) beta 3 -58388393 M34055 3p21.1-p14.2 Hs.161357 27

pyruvate dehydrogenase (acetyl-transferring) activity

mitochondrion

mitochondrial matrix

glycolysis

tricarboxylic acid cycle

oxidoreductase activity

oxidation reduction

Glycolysis / Gluconeogenesis

Citrate cycle (TCA cycle)

Valine, leucine and isoleucine biosynthesis

Pyruvate metabolism

Butanoate metabolism

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

1553351_at 0.329 3.749 2.840 1.228e-02 0.181 -2.910 OTUD7A OTU domain containing 7A 15 -29562620 NM_130901 15q13.3 Hs.355236 2

DNA binding

nucleus

cytoplasm

peptidase activity

cysteine-type peptidase activity

zinc ion binding

modification-dependent protein catabolic process

metal ion binding

 
229322_at -0.593 8.239 -2.840 1.229e-02 0.181 -2.911 PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform 14 -62911107 BF529715 14q23.1 Hs.334868 20

protein phosphatase type 2A complex

protein binding

cytoplasm

signal transduction

protein phosphatase type 2A regulator activity

intracellular membrane-bounded organelle

Wnt signaling pathway

218871_x_at -0.451 7.672 -2.840 1.229e-02 0.181 -2.911 CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 10 42953939 NM_018590 10q11.21 Hs.657569 6

protein binding

Golgi apparatus

membrane

integral to membrane

transferase activity

integral to Golgi membrane

Golgi cisterna membrane

metal ion binding

glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity

dermatan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process

chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process

Chondroitin sulfate biosynthesis

Metabolic pathways

213531_s_at -0.284 9.506 -2.839 1.232e-02 0.181 -2.913 RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 2 135526322 AI040009 2q21.3 Hs.306327 17

GTPase activator activity

Rab GTPase activator activity

soluble fraction

cytoplasm

Rab GTPase binding

regulation of GTPase activity

 
229570_at 0.271 5.497 2.838 1.232e-02 0.181 -2.913 LAMA5 laminin, alpha 5 20 -60317515 BE219071 20q13.2-q13.3 Hs.473256 61

receptor binding

structural molecule activity

extracellular region

basement membrane

laminin-1 complex

regulation of cell adhesion

regulation of cell migration

substrate adhesion-dependent cell spreading

laminin-10 complex

laminin-11 complex

regulation of embryonic development

Focal adhesion

ECM-receptor interaction

Pathways in cancer

Small cell lung cancer

202242_at -0.477 9.102 -2.838 1.232e-02 0.181 -2.913 TSPAN7 tetraspanin 7 X 38305674 NM_004615 Xp11.4 Hs.441664 18

plasma membrane

integral to plasma membrane

protein amino acid N-linked glycosylation

 
211960_s_at -0.394 8.054 -2.838 1.233e-02 0.181 -2.914 RAB7A RAB7A, member RAS oncogene family 3 129927668 BG261416 3q21.3 Hs.15738 Hs.716392 64

nucleotide binding

GTPase activity

protein binding

GTP binding

cytoplasm

lysosome

late endosome

Golgi apparatus

endocytosis

small GTPase mediated signal transduction

protein transport

cytoplasmic vesicle

melanosome

phagocytic vesicle

 
204367_at -0.389 6.088 -2.838 1.233e-02 0.181 -2.914 SP2 Sp2 transcription factor 17 43328514 D28588 17q21.32 Hs.514276 18

DNA binding

RNA polymerase II transcription factor activity

intracellular

nucleus

regulation of transcription from RNA polymerase II promoter

immune response

zinc ion binding

histone deacetylase binding

regulation of transcription

metal ion binding

 
217478_s_at 1.138 5.897 2.838 1.233e-02 0.181 -2.914 HLA-DMA major histocompatibility complex, class II, DM alpha 6 -33024368, -4297243, -4102463 X76775 6p21.3 Hs.351279 72

nucleotide binding

antigen processing and presentation of peptide or polysaccharide antigen via MHC class II

protein binding

ATP binding

intracellular

lysosomal membrane

multivesicular body

plasma membrane

protein complex assembly

endosome membrane

protein transport

integral to membrane

immunoglobulin mediated immune response

antigen processing and presentation of exogenous peptide antigen via MHC class II

peptide binding

MHC class I protein binding

MHC class II protein complex

TAP complex

positive thymic T cell selection

positive regulation of T cell differentiation

positive regulation of immune response

chaperone mediated protein folding requiring cofactor

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

209335_at 0.620 8.939 2.838 1.234e-02 0.181 -2.914 DCN decorin 12 -90063165, -90063165, -90063165 AI281593 12q21.33 Hs.718429 104

protein binding

glycosaminoglycan binding

extracellular region

proteinaceous extracellular matrix

organ morphogenesis

peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan

extracellular matrix binding

TGF-beta signaling pathway

202372_at -0.275 6.772 -2.837 1.235e-02 0.181 -2.915 RAB3GAP2 RAB3 GTPase activating protein subunit 2 (non-catalytic) 1 -218388232 BF240652 1q41 Hs.654849 Hs.708165 14

GTPase activator activity

protein binding

soluble fraction

cytoplasm

intracellular protein transport

regulation of GTPase activity

protein heterodimerization activity

 
207688_s_at -0.534 4.831 -2.837 1.235e-02 0.181 -2.916 INHBC inhibin, beta C 12 56114809 NM_005538 12q13.1 Hs.632722 12

transforming growth factor beta receptor binding

hormone activity

extracellular region

growth factor activity

Cytokine-cytokine receptor interaction

TGF-beta signaling pathway

218300_at 0.259 7.164 2.837 1.235e-02 0.181 -2.916 C16orf53 chromosome 16 open reading frame 53 16 29735028 NM_024516 16p11.2 Hs.702841 7    
212205_at -0.432 9.711 -2.837 1.236e-02 0.181 -2.916 H2AFV H2A histone family, member V 7 -44839737, -44833012 AA534860 7p13 Hs.488189 12

nucleosome

DNA binding

nucleus

chromosome

nucleosome assembly

Systemic lupus erythematosus

204499_at -0.486 5.895 -2.837 1.237e-02 0.181 -2.916 AGTPBP1 ATP/GTP binding protein 1 9 -87351273 AB028958 9q21.33 Hs.494321 7

metallocarboxypeptidase activity

binding

nucleus

cytoplasm

proteolysis

peptidase activity

metallopeptidase activity

zinc ion binding

cerebellar Purkinje cell differentiation

neurotransmitter metabolic process

metal ion binding

neuromuscular process

 
226214_at -0.371 8.802 -2.836 1.237e-02 0.181 -2.917 GDE1 glycerophosphodiester phosphodiesterase 1 16 -19420515 BE677894 16p12-p11.2 Hs.512607 8

magnesium ion binding

cytoplasm

glycerol metabolic process

lipid metabolic process

glycerophosphodiester phosphodiesterase activity

membrane

integral to membrane

hydrolase activity

glycerophosphoinositol glycerophosphodiesterase activity

Glycerophospholipid metabolism

217655_at 0.250 3.262 2.836 1.237e-02 0.181 -2.917 LOC100127972 hypothetical LOC100127972 19   BE552409 19q13.12 Hs.710764 Hs.716895 1    
203865_s_at 0.404 6.535 2.836 1.238e-02 0.181 -2.917 ADARB1 adenosine deaminase, RNA-specific, B1 (RED1 homolog rat) 21 45318920 NM_015833 21q22.3 Hs.474018 35

double-stranded RNA binding

adenosine deaminase activity

intracellular

mRNA processing

zinc ion binding

hydrolase activity

metal ion binding

 
235798_at -0.578 6.282 -2.836 1.238e-02 0.181 -2.917 TMEM170B transmembrane protein 170B 6 11646496 BE671123 6p24.2 Hs.146317 1

membrane

integral to membrane

 
204578_at 0.286 6.207 2.836 1.239e-02 0.181 -2.918 HISPPD2A histidine acid phosphatase domain containing 2A 15 -41612952 NM_014659 15q15.3 Hs.156814 8

nucleotide binding

inositol 1,3,4,5,6-pentakisphosphate kinase activity

inositol hexakisphosphate 5-kinase activity

acid phosphatase activity

ATP binding

cytoplasm

cytosol

inositol metabolic process

kinase activity

transferase activity

diphosphoinositol-pentakisphosphate kinase activity

 
202173_s_at -0.511 7.642 -2.835 1.240e-02 0.181 -2.919 VEZF1 vascular endothelial zinc finger 1 17 -53403908 NM_007146 17q22 Hs.463569 3

angiogenesis

endothelial cell development

DNA binding

specific RNA polymerase II transcription factor activity

intracellular

nucleus

regulation of transcription from RNA polymerase II promoter

cellular defense response

zinc ion binding

regulation of transcription

metal ion binding

 
231853_at -0.454 4.832 -2.835 1.241e-02 0.181 -2.920 TUBD1 tubulin, delta 1 17 -55291632 AK022771 17q23.1 Hs.463638 7

nucleotide binding

GTPase activity

structural molecule activity

GTP binding

nucleus

cytoplasm

centriole

microtubule

microtubule-based movement

multicellular organismal development

spermatogenesis

cell differentiation

protein complex

protein polymerization

 
218604_at -0.316 7.313 -2.835 1.241e-02 0.181 -2.920 LEMD3 LEM domain containing 3 12 63849637 NM_014319 12q14 Hs.718513 13

nucleotide binding

DNA binding

membrane fraction

nucleus

nuclear envelope

integral to nuclear inner membrane

membrane

integral to membrane

 
209659_s_at -0.331 8.563 -2.835 1.242e-02 0.181 -2.920 CDC16 cell division cycle 16 homolog (S. cerevisiae) 13 114018463 AF164598 13q34 Hs.374127 32

binding

nucleoplasm

cytoplasm

centrosome

cytosol

spindle microtubule

cell cycle

regulation of mitosis

cell proliferation

modification-dependent protein catabolic process

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

cell division

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

219631_at -0.412 5.780 -2.834 1.242e-02 0.181 -2.921 LRP12 low density lipoprotein-related protein 12 8 -105570642 NM_024937 8q22.2-q23.1 Hs.600630 8

receptor activity

low-density lipoprotein receptor activity

protein binding

nucleolus

cytoplasm

plasma membrane

integral to plasma membrane

coated pit

endocytosis

signal transduction

regulation of growth

 
203864_s_at -0.642 10.963 -2.834 1.243e-02 0.181 -2.921 ACTN2 actinin, alpha 2 1 234916392 NM_001103 1q42-q43 Hs.498178 57

actin binding

integrin binding

calcium ion binding

nucleolus

cytoplasm

cytoskeleton

actin filament

focal adhesion

muscle contraction

cell adhesion

structural constituent of muscle

Z disc

microspike assembly

filopodium

thyroid hormone receptor coactivator activity

pseudopodium

titin binding

identical protein binding

regulation of apoptosis

dendritic spine

protein dimerization activity

focal adhesion formation

protein homotetramerization

ZASP binding

FATZ 1 binding

titin Z domain binding

Focal adhesion

Adherens junction

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Systemic lupus erythematosus

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

204813_at 0.380 5.818 2.834 1.243e-02 0.181 -2.921 MAPK10 mitogen-activated protein kinase 10 4 -87156655, -87156655, -87156655, -87156655 NM_002753 4q22.1-q23 Hs.125503 54

nucleotide binding

protein serine/threonine kinase activity

JUN kinase activity

MAP kinase activity

MAP kinase kinase activity

ATP binding

cytoplasm

protein amino acid phosphorylation

signal transduction

JNK cascade

transferase activity

MAPK signaling pathway

ErbB signaling pathway

Wnt signaling pathway

Focal adhesion

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

Fc epsilon RI signaling pathway

Neurotrophin signaling pathway

Insulin signaling pathway

GnRH signaling pathway

Adipocytokine signaling pathway

Type II diabetes mellitus

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Colorectal cancer

Pancreatic cancer

214365_at 0.322 13.128 2.833 1.246e-02 0.182 -2.923 TPM3 tropomyosin 3 1 -152400913, -152394403 X04201 1q21.2 Hs.535581 Hs.644306 Hs.654421 66

molecular_function

actin binding

protein binding

cytoplasm

cytoskeleton

cytoskeleton

muscle thin filament tropomyosin

cell motion

regulation of muscle contraction

Cardiac muscle contraction

Pathways in cancer

Thyroid cancer

Hypertrophic cardiomyopathy (HCM)

225594_at -0.519 6.589 -2.832 1.247e-02 0.182 -2.924 CREBZF CREB/ATF bZIP transcription factor 11 -85046257 AL038866 11q14 Hs.535319 Hs.595940 Hs.714910 12

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

response to virus

negative regulation of transcription

specific transcriptional repressor activity

sequence-specific DNA binding

negative regulation of gene expression, epigenetic

regulation of transcription factor activity

 
201052_s_at 0.395 7.913 2.832 1.248e-02 0.182 -2.925 PSMF1 proteasome (prosome, macropain) inhibitor subunit 1 (PI31) 20 1041905, 1047239 BG029917 20p13 Hs.471917 45

protein binding

cytosol

proteasome core complex

ubiquitin-dependent protein catabolic process

proteasome inhibitor activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

239533_at -0.414 6.111 -2.832 1.249e-02 0.182 -2.925 GPR155 G protein-coupled receptor 155 2 -175004620 AI970061 2q31.1 Hs.516604 9

intracellular signaling cascade

membrane

integral to membrane

 
219827_at -0.922 8.156 -2.832 1.249e-02 0.182 -2.926 UCP3 uncoupling protein 3 (mitochondrial, proton carrier) 11 -73391459, -73388975 NM_003356 11q13 Hs.101337 Hs.621879 108

response to superoxide

response to hypoxia

transporter activity

binding

mitochondrion

mitochondrial inner membrane

lipid metabolic process

fatty acid metabolic process

transport

mitochondrial transport

respiratory gaseous exchange

proton transport

membrane

integral to membrane

oxidative phosphorylation uncoupler activity

 
211529_x_at 0.434 8.598 2.831 1.251e-02 0.182 -2.927 HLA-G major histocompatibility complex, class I, G 6 29902734, 1247153, 1049287 M90684 6p21.3 Hs.512152 316

antigen processing and presentation of peptide antigen via MHC class I

immune response

cellular defense response

membrane

integral to membrane

antigen processing and presentation

MHC class I receptor activity

MHC class I protein complex

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

224452_s_at -0.630 9.919 -2.831 1.252e-02 0.182 -2.928 C7orf70 chromosome 7 open reading frame 70 7 -6335564 BC006110 7p22.1 Hs.696146 4

nucleus

 
229405_at 0.308 5.161 2.830 1.253e-02 0.182 -2.928 KIF7 kinesin family member 7 15 -87972204 BF515033 15q26.1 Hs.513134 5

nucleotide binding

microtubule motor activity

ATP binding

microtubule-based movement

 
226335_at -0.478 9.065 -2.830 1.254e-02 0.182 -2.929 RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 X -20077949 BG498334 Xp22.2-p22.1 Hs.445387 89

nucleotide binding

magnesium ion binding

skeletal system development

protein serine/threonine kinase activity

protein serine/threonine kinase activity

ATP binding

nucleus

nucleoplasm

cytoplasm

protein amino acid phosphorylation

signal transduction

protein kinase cascade

central nervous system development

transferase activity

MAPK signaling pathway

mTOR signaling pathway

Long-term potentiation

Neurotrophin signaling pathway

200639_s_at 0.276 8.079 2.830 1.254e-02 0.182 -2.929 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide 8 -101999980, -101999980, -101999980, -101999980, -101999980 NM_003406 8q23.1 Hs.492407 Hs.594673 169

nucleus

cytoplasm

mitochondrion

protein targeting

anti-apoptosis

signal transduction

transcription factor binding

protein domain specific binding

melanosome

Cell cycle

Neurotrophin signaling pathway

Pathogenic Escherichia coli infection - EHEC

222896_at -0.535 9.914 -2.829 1.255e-02 0.182 -2.930 TMEM38A transmembrane protein 38A 19 16632937 AA196034 19p13.11 Hs.436068 4

potassium channel activity

nucleus

ion transport

potassium ion transport

membrane

integral to membrane

potassium ion binding

nuclear membrane

sarcoplasmic reticulum membrane

 
243582_at -0.952 6.632 -2.829 1.257e-02 0.183 -2.931 SH3RF2 SH3 domain containing ring finger 2 5 145296318 AW082633 5q32 Hs.443728 4

protein binding

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
200676_s_at -0.438 6.244 -2.829 1.257e-02 0.183 -2.931 UBE2L3 ubiquitin-conjugating enzyme E2L 3 22 20251956 NM_003347 22q11.21 Hs.108104 Hs.603229 Hs.715088 38

ubiquitin ligase complex

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

cytoplasm

ubiquitin-dependent protein catabolic process

protein ubiquitination

ligase activity

enzyme binding

regulation of protein metabolic process

Ubiquitin mediated proteolysis

Parkinson's disease

1558662_s_at 0.212 2.853 2.828 1.259e-02 0.183 -2.933 BANK1 B-cell scaffold protein with ankyrin repeats 1 4 102930786, 102954005 BG200452 4q24 Hs.480400 11

B cell activation

 
203906_at 0.297 7.755 2.828 1.259e-02 0.183 -2.933 IQSEC1 IQ motif and Sec7 domain 1 3 -12913718, -12913718 AI652645 3p25.2 Hs.475506 10

ARF guanyl-nucleotide exchange factor activity

intracellular

nucleus

cytoplasm

regulation of ARF protein signal transduction

Endocytosis

206416_at 0.320 6.929 2.828 1.259e-02 0.183 -2.933 ZNF205 zinc finger protein 205 16 3102563 NM_003456 16p13.3 Hs.592088 5

DNA binding

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
231812_x_at -0.268 7.365 -2.828 1.259e-02 0.183 -2.933 PHAX phosphorylated adaptor for RNA export 5 125964531 AK023255 5q23.2 Hs.555731 Hs.719165 10

spliceosomal snRNP biogenesis

RNA binding

protein binding

nucleus

nucleoplasm

nucleoplasm

cytoplasm

cytosol

snRNA export from nucleus

Cajal body

protein transport

 
238601_at -0.805 8.441 -2.827 1.260e-02 0.183 -2.934 PHKB phosphorylase kinase, beta 16 46052710 AI798207 16q12-q13 Hs.78060 13

catalytic activity

calmodulin binding

plasma membrane

carbohydrate metabolic process

glycogen metabolic process

generation of precursor metabolites and energy

Calcium signaling pathway

Insulin signaling pathway

244477_at 0.310 5.739 2.827 1.260e-02 0.183 -2.934 SLC12A3 solute carrier family 12 (sodium/chloride transporters), member 3 16 55456619 AW292635 16q13 Hs.669115 52

transporter activity

membrane fraction

integral to plasma membrane

ion transport

sodium ion transport

chloride transport

symporter activity

sodium:chloride symporter activity

membrane

apical plasma membrane

sodium ion binding

 
201170_s_at -1.718 8.515 -2.827 1.261e-02 0.183 -2.935 BHLHE40 basic helix-loop-helix family, member e40 3 4996096 NM_003670 3p26 Hs.719093 26

transcription factor activity

protein binding

nucleus

entrainment of circadian clock

transcription repressor activity

negative regulation of transcription, DNA-dependent

regulation of neuronal synaptic plasticity

Circadian rhythm - mammal

238176_at -0.518 4.006 -2.826 1.263e-02 0.183 -2.935 RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 4 160408447 T86196 4q32.1 Hs.113912 14

MAPKKK cascade

signal transducer activity

guanyl-nucleotide exchange factor activity

calcium ion binding

protein binding

intracellular

plasma membrane

integral to plasma membrane

Rap guanyl-nucleotide exchange factor activity

cAMP-mediated signaling

diacylglycerol binding

Rap GTPase activator activity

regulation of small GTPase mediated signal transduction

MAPK signaling pathway

211023_at 0.234 11.771 2.826 1.263e-02 0.183 -2.936 PDHB pyruvate dehydrogenase (lipoamide) beta 3 -58388393 AL117618 3p21.1-p14.2 Hs.161357 27

pyruvate dehydrogenase (acetyl-transferring) activity

mitochondrion

mitochondrial matrix

glycolysis

tricarboxylic acid cycle

oxidoreductase activity

oxidation reduction

Glycolysis / Gluconeogenesis

Citrate cycle (TCA cycle)

Valine, leucine and isoleucine biosynthesis

Pyruvate metabolism

Butanoate metabolism

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

202512_s_at -0.423 6.611 -2.826 1.264e-02 0.183 -2.936 ATG5 ATG5 autophagy related 5 homolog (S. cerevisiae) 6 -106739044 NM_004849 6q21 Hs.486063 30

autophagic vacuole formation

protein binding

cytoplasm

autophagic vacuole

autophagy

apoptosis

pre-autophagosomal structure membrane

post-translational protein modification

Regulation of autophagy

RIG-I-like receptor signaling pathway

234984_at -0.771 8.407 -2.826 1.265e-02 0.183 -2.937 NEDD1 neural precursor cell expressed, developmentally down-regulated 1 12 95825131, 95825374 AA236927 12q23.1 Hs.270084 10

pericentriolar material

spindle pole

cytoplasm

centriole

microtubule basal body

cell cycle

mitosis

apical part of cell

cell division

 
212623_at -0.423 6.618 -2.825 1.266e-02 0.183 -2.938 TMEM41B transmembrane protein 41B 11 -9258777 AU153138 11p15.4 Hs.594563 4

membrane

integral to membrane

 
226909_at -0.306 7.200 -2.825 1.266e-02 0.183 -2.938 ZNF518B zinc finger protein 518B 4 -10050601 AW270138 4p16.1 Hs.455089 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
1552344_s_at -0.634 6.052 -2.825 1.267e-02 0.183 -2.938 CNOT7 CCR4-NOT transcription complex, subunit 7 8 -17133392, -17131110 NM_054026 8p22-p21.3 Hs.645009 Hs.719129 19

nucleic acid binding

transcription factor activity

signal transducer activity

protein binding

nucleus

carbohydrate metabolic process

signal transduction

transcription activator activity

CCR4-NOT complex

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

RNA degradation

217897_at 0.270 6.983 2.825 1.267e-02 0.183 -2.938 FXYD6 FXYD domain containing ion transport regulator 6 11 -117212902 NM_022003 11q23.3 Hs.713034 14

molecular_function

ion channel activity

extracellular space

plasma membrane

ion transport

biological_process

integral to membrane

 
212342_at -0.518 5.669 -2.825 1.267e-02 0.183 -2.939 YIPF6 Yip1 domain family, member 6 X 67635610 BG500611 Xq12 Hs.700646 Hs.82719 10

endoplasmic reticulum

membrane

integral to membrane

 
220926_s_at -0.599 5.557 -2.824 1.269e-02 0.183 -2.940 EDEM3 ER degradation enhancer, mannosidase alpha-like 3 1 -182926247 NM_025191 1q24-q25 Hs.523811 10

mannosyl-oligosaccharide 1,2-alpha-mannosidase activity

calcium ion binding

endoplasmic reticulum

endoplasmic reticulum lumen

response to unfolded protein

membrane

 
223985_at -0.410 3.084 -2.824 1.269e-02 0.183 -2.940 FSD1L fibronectin type III and SPRY domain containing 1-like 9 107250135, 107250135, 107250145 AF316830 9q31 Hs.136901 4

molecular_function

cellular_component

biological_process

 
213776_at -0.388 6.448 -2.824 1.270e-02 0.183 -2.941 LOC157562 hypothetical protein LOC157562 8   AA583336 8q22.3 Hs.27371      
239426_at -0.585 4.922 -2.823 1.270e-02 0.183 -2.941 SLC2A8 solute carrier family 2 (facilitated glucose transporter), member 8 9 129199285 AA812746 9q33.3 Hs.179522 7

response to hypoxia

transporter activity

glucose transmembrane transporter activity

glucose binding

plasma membrane

integral to plasma membrane

carbohydrate metabolic process

insulin receptor signaling pathway

carbohydrate transport

glucose transport

substrate-specific transmembrane transporter activity

cytoplasmic vesicle

intracellular membrane-bounded organelle

transmembrane transport

 
228381_at 0.735 4.616 2.823 1.270e-02 0.183 -2.941 ATF7IP2 activating transcription factor 7 interacting protein 2 16 10430225 AV716964 16p13.13 Hs.513343 6

nucleus

regulation of transcription

 
225921_at -0.702 7.246 -2.823 1.271e-02 0.183 -2.942 NIN ninein (GSK3B interacting protein) 14 -50263700, -50262296, -50262296, -50256230 AL359571 14q22.1 Hs.310429 23

nucleotide binding

protein binding

GTP binding

centrosome

microtubule

centrosome localization

 
226043_at 0.233 6.571 2.823 1.272e-02 0.183 -2.942 GPSM1 G-protein signaling modulator 1 (AGS3-like, C. elegans) 9 138341752, 138341752, 138367329 AI242661 9q34.3 Hs.239370 14

GTPase activator activity

binding

cytoplasm

endoplasmic reticulum

Golgi apparatus

cytosol

plasma membrane

signal transduction

multicellular organismal development

nervous system development

cell differentiation

 
225804_at 0.462 6.474 2.823 1.272e-02 0.183 -2.942 CYB5D2 cytochrome b5 domain containing 2 17 3993210 BE044480 17p13.2 Hs.513871 2

membrane

integral to membrane

heme binding

 
207795_s_at 0.260 4.010 2.822 1.273e-02 0.183 -2.943 KLRD1 killer cell lectin-like receptor subfamily D, member 1 12 10348316, 10351683 AB009597 12p13 Hs.562457 46

transmembrane receptor activity

binding

sugar binding

plasma membrane

plasma membrane

cell surface receptor linked signal transduction

integral to membrane

Antigen processing and presentation

Natural killer cell mediated cytotoxicity

Graft-versus-host disease

225827_at -0.369 6.689 -2.822 1.273e-02 0.183 -2.943 EIF2C2 eukaryotic translation initiation factor 2C, 2 8 -141610445 AI832074 8q24 Hs.449415 47

RNA 7-methylguanosine cap binding

cytoplasmic mRNA processing body

translation initiation factor activity

endonuclease activity

protein binding

nucleus

cytoplasm

mRNA cap binding complex

regulation of translation

RNA-induced silencing complex

hydrolase activity

gene silencing by RNA

pre-microRNA processing

micro-ribonucleoprotein complex

siRNA binding

gene silencing by miRNA, negative regulation of translation

gene silencing by miRNA, negative regulation of translation

gene silencing by miRNA, mRNA cleavage

gene silencing by miRNA, mRNA cleavage

regulation of transcription

negative regulation of translational initiation

metal ion binding

endoribonuclease activity, cleaving siRNA-paired mRNA

 
219603_s_at 0.353 4.885 2.822 1.274e-02 0.183 -2.944 ZNF226 zinc finger protein 226 19 49361088, 49361088, 49361096, 49361156 NM_015919 19q13.2 Hs.145956 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
201528_at -0.476 8.704 -2.822 1.275e-02 0.183 -2.944 RPA1 replication protein A1, 70kDa 17 1680022 BG398414 17p13.3 Hs.461925 Hs.595562 106

nucleotide-excision repair, DNA damage removal

double-strand break repair via homologous recombination

condensed nuclear chromosome

male germ cell nucleus

in utero embryonic development

DNA binding

chromatin binding

single-stranded DNA binding

protein binding

nucleus

nucleoplasm

DNA replication factor A complex

cytoplasm

cytoskeleton

DNA-dependent DNA replication

DNA repair

nucleotide-excision repair, DNA gap filling

DNA recombination

meiosis

zinc ion binding

positive regulation of cell proliferation

PML body

hemopoiesis

metal ion binding

homeostasis of number of cells within a tissue

chromosome organization

DNA replication

Nucleotide excision repair

Mismatch repair

Homologous recombination

210875_s_at -0.709 6.856 -2.822 1.275e-02 0.183 -2.944 ZEB1 zinc finger E-box binding homeobox 1 10 31647429, 31647717, 31647752, 31648106, 31650069 U12170 10p11.2 Hs.124503 52

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

transcription coactivator activity

transcription corepressor activity

intracellular

nucleus

immune response

zinc ion binding

cell proliferation

sequence-specific DNA binding

metal ion binding

 
201058_s_at 0.648 5.795 2.821 1.276e-02 0.183 -2.945 MYL9 myosin, light chain 9, regulatory 20 34603310 NM_006097 20q11.23 Hs.504687 8

motor activity

calcium ion binding

muscle myosin complex

regulation of muscle contraction

structural constituent of muscle

myosin complex

Vascular smooth muscle contraction

Focal adhesion

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

1554258_a_at -0.316 5.286 -2.821 1.276e-02 0.184 -2.945 DNAJC5B DnaJ (Hsp40) homolog, subfamily C, member 5 beta 8 67096344 AF368276 8q13.1 Hs.491885 3

protein folding

membrane

heat shock protein binding

unfolded protein binding

 
1554868_s_at -0.715 7.913 -2.820 1.278e-02 0.184 -2.947 PCNP PEST proteolytic signal containing nuclear protein 3 102775731 BC013916 3q12.3 Hs.545311 Hs.654949 6

protein binding

nucleus

cell cycle

protein ubiquitination

proteasomal ubiquitin-dependent protein catabolic process

 
223743_s_at 0.518 7.087 2.819 1.281e-02 0.184 -2.948 MRPL4 mitochondrial ribosomal protein L4 19 10223639, 10223639 BC000756 19p13.2 Hs.279652 10

structural constituent of ribosome

intracellular

mitochondrion

ribosome

translation

 
212288_at -0.350 7.949 -2.819 1.281e-02 0.184 -2.949 FNBP1 formin binding protein 1 9 -131689286 AB011126 9q34 Hs.189409 25

cytoplasm

lysosome

cytoskeleton

plasma membrane

cell cortex

endocytosis

lipid binding

cytoplasmic vesicle

identical protein binding

 
225136_at 0.562 6.160 2.819 1.281e-02 0.184 -2.949 PLEKHA2 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 8 38877909 BF968578 8p11.22 Hs.369123 4

phospholipid binding

phosphatidylinositol binding

cellular_component

nucleus

cytoplasm

plasma membrane

biological_process

 
224558_s_at -0.527 9.293 -2.818 1.283e-02 0.184 -2.950 MALAT1 metastasis associated lung adenocarcinoma transcript 1 (non-protein coding) 11 65021808 AI446756 11q13.1 Hs.642877 Hs.714394 8    
206682_at 0.412 4.632 2.818 1.283e-02 0.184 -2.950 CLEC10A C-type lectin domain family 10, member A 17 -6918579 NM_006344 17p13.1 Hs.54403 4

binding

sugar binding

plasma membrane

endocytosis

immune response

integral to membrane

 
208744_x_at -0.300 6.312 -2.818 1.284e-02 0.184 -2.951 HSPH1 heat shock 105kDa/110kDa protein 1 13 -30608762 BG403660 13q12.3 Hs.36927 25

nucleotide binding

ATP binding

cytoplasm

response to unfolded protein

 
201461_s_at -0.271 2.922 -2.818 1.284e-02 0.184 -2.951 MAPKAPK2 mitogen-activated protein kinase-activated protein kinase 2 1 204924911 NM_004759 1q32 Hs.643566 Hs.713747 61

MAPKKK cascade

nucleotide binding

protein serine/threonine kinase activity

signal transducer activity

protein binding

ATP binding

nucleus

cytosol

protein amino acid phosphorylation

intracellular signaling cascade

Ras protein signal transduction

transferase activity

MAPK signaling pathway

VEGF signaling pathway

Neurotrophin signaling pathway

200968_s_at 0.452 6.890 2.818 1.285e-02 0.184 -2.951 PPIB peptidylprolyl isomerase B (cyclophilin B) 15 -62235066 NM_000942 15q21-q22 Hs.434937 41

peptidyl-prolyl cis-trans isomerase activity

endoplasmic reticulum

endoplasmic reticulum lumen

protein folding

isomerase activity

peptide binding

melanosome

unfolded protein binding

 
200059_s_at -0.353 10.457 -2.818 1.285e-02 0.184 -2.951 RHOA ras homolog gene family, member A 3 -49371582 BC001360 3p21.3 Hs.247077 Hs.709788 348

nucleotide binding

magnesium ion binding

cell morphogenesis

GTPase activity

protein binding

GTP binding

intracellular

nucleus

cytoplasm

cytoskeleton

plasma membrane

regulation of transcription from RNA polymerase II promoter

cell adhesion

cell-matrix adhesion

small GTPase mediated signal transduction

Rho protein signal transduction

skeletal muscle tissue development

myosin binding

actin cytoskeleton organization

cell differentiation

positive regulation of NF-kappaB import into nucleus

positive regulation of I-kappaB kinase/NF-kappaB cascade

negative regulation of neuron apoptosis

interspecies interaction between organisms

negative regulation of neuron differentiation

positive regulation of neuron differentiation

positive regulation of stress fiber formation

Chemokine signaling pathway

Vascular smooth muscle contraction

Wnt signaling pathway

TGF-beta signaling pathway

Axon guidance

Focal adhesion

Adherens junction

Tight junction

T cell receptor signaling pathway

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Pathogenic Escherichia coli infection - EHEC

Pathways in cancer

208907_s_at 0.358 9.821 2.818 1.285e-02 0.184 -2.952 MRPS18B mitochondrial ribosomal protein S18B 6 30693464, 2034045, 1832339 BC005373 6p21.3 Hs.655329 11

structural constituent of ribosome

intracellular

mitochondrion

mitochondrial small ribosomal subunit

ribosome

translation

 
217811_at -0.290 8.433 -2.817 1.286e-02 0.184 -2.952 SELT selenoprotein T 3 151803755 NM_016275 3q25.1 Hs.369052 9

selenocysteine incorporation

selenium binding

cell redox homeostasis

 
232604_at 0.314 5.571 2.817 1.286e-02 0.184 -2.952 ZNF541 zinc finger protein 541 19 -52715759 AL136846 19q13.33 Hs.14161 3

DNA binding

intracellular

nucleus

multicellular organismal development

spermatogenesis

zinc ion binding

cell differentiation

regulation of transcription

metal ion binding

 
216100_s_at -0.796 4.756 -2.817 1.286e-02 0.184 -2.952 TOR1AIP1 torsin A interacting protein 1 1 178118042 BG289527 1q24.2 Hs.496459 9

nucleus

membrane

integral to membrane

 
221808_at -0.352 7.489 -2.817 1.287e-02 0.184 -2.953 RAB9A RAB9A, member RAS oncogene family X 13617261 NM_004251 Xp22.2 Hs.495704 24

Golgi membrane

nucleotide binding

GTPase activity

protein binding

GTP binding

lysosome

late endosome

endoplasmic reticulum

endoplasmic reticulum membrane

Golgi apparatus

plasma membrane

small GTPase mediated signal transduction

protein transport

 
214263_x_at -0.417 7.718 -2.817 1.288e-02 0.184 -2.953 POLR2C polymerase (RNA) II (DNA directed) polypeptide C, 33kDa 16 56054051 AI192781 16q13-q21 Hs.79402 89

nuclear mRNA splicing, via spliceosome

DNA binding

DNA-directed RNA polymerase activity

nucleus

nucleoplasm

cytoplasm

transcription

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

protein dimerization activity

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

Huntington's disease

202843_at -0.528 6.201 -2.816 1.288e-02 0.184 -2.954 DNAJB9 DnaJ (Hsp40) homolog, subfamily B, member 9 7 107997591 NM_012328 14q24.2-q24.3 7q31 Hs.6790 16

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

protein folding

heat shock protein binding

unfolded protein binding

 
235634_at 0.283 5.179 2.816 1.289e-02 0.184 -2.954 PURG purine-rich element binding protein G 8 -31007898, -30972862 BE503391 8p11 Hs.373778 3

DNA binding

nucleus

 
221374_at -0.279 4.109 -2.816 1.290e-02 0.184 -2.955 FGF16 fibroblast growth factor 16 X 76596302 NM_003868 Xq13 Hs.666364 9

extracellular region

extracellular region

extracellular space

signal transduction

cell-cell signaling

growth factor activity

metabolic process

fibroblast growth factor receptor signaling pathway

response to temperature stimulus

organ morphogenesis

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

223342_at -0.569 7.996 -2.815 1.293e-02 0.184 -2.957 RRM2B ribonucleotide reductase M2 B (TP53 inducible) 8 -103285906 AB036063 8q23.1 Hs.512592 29

kidney development

renal system process

ribonucleoside-diphosphate reductase activity

iron ion binding

nucleus

cytoplasm

DNA replication

mitochondrial DNA replication

DNA repair

induction of apoptosis

response to DNA damage stimulus

response to oxidative stress

deoxyribonucleoside diphosphate metabolic process

deoxyribonucleoside triphosphate metabolic process

deoxyribonucleotide biosynthetic process

oxidoreductase activity

oxidation reduction

Purine metabolism

Pyrimidine metabolism

Glutathione metabolism

Metabolic pathways

p53 signaling pathway

208870_x_at 0.364 11.900 2.814 1.294e-02 0.185 -2.958 ATP5C1 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 10 7870098 BC000931 10p15.1 Hs.271135 18

mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)

mitochondrion

mitochondrion

mitochondrial matrix

ion transport

ATP synthesis coupled proton transport

proton transport

membrane

ATPase activity

ATPase activity

hydrogen ion transporting ATP synthase activity, rotational mechanism

proton-transporting ATPase activity, rotational mechanism

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

231437_at 0.240 4.973 2.814 1.295e-02 0.185 -2.958 SLC35D2 solute carrier family 35, member D2 9 -98122809 AA693722 9q22.32 Hs.494556 6

nucleotide-sugar transmembrane transporter activity

cellular_component

Golgi apparatus

biological_process

carbohydrate transport

membrane

integral to membrane

 
235233_s_at -0.442 6.172 -2.813 1.296e-02 0.185 -2.959 GMEB1 glucocorticoid modulatory element binding protein 1 1 28867830, 28867830 AI061377 1p35.3 Hs.632373 18

DNA binding

transcription coactivator activity

binding

nucleus

cytoplasm

zinc ion binding

regulation of transcription

metal ion binding

 
206090_s_at 0.352 4.538 2.813 1.297e-02 0.185 -2.960 DISC1 disrupted in schizophrenia 1 1 229829183, 229829183, 229829183 NM_018662 1q42.1 Hs.13318 91

protein binding

cellular_component

cytoplasm

centrosome

cytoskeleton

microtubule

biological_process

 
216988_s_at -0.708 9.541 -2.813 1.297e-02 0.185 -2.960 PTP4A2 protein tyrosine phosphatase type IVA, member 2 1 -32146379 L48722 1p35 Hs.470477 Hs.712749 Hs.713025 21

prenylated protein tyrosine phosphatase activity

protein binding

cytoplasm

early endosome

plasma membrane

protein amino acid dephosphorylation

hydrolase activity

 
200601_at 0.335 6.904 2.813 1.298e-02 0.185 -2.960 ACTN4 actinin, alpha 4 19 43830166 U48734 19q13 Hs.270291 64

response to hypoxia

stress fiber

nucleoside binding

integrin binding

calcium ion binding

nucleus

nucleolus

cytoplasm

protein transport

cortical cytoskeleton

pseudopodium

positive regulation of sodium:hydrogen antiporter activity

protein homodimerization activity

regulation of apoptosis

protein complex

protein N-terminus binding

perinuclear region of cytoplasm

positive regulation of pinocytosis

actin filament binding

actin filament bundle formation

negative regulation of cell motion

positive regulation of cell motion

positive regulation of cell motion

Focal adhesion

Adherens junction

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Systemic lupus erythematosus

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

37425_g_at 0.293 5.564 2.813 1.299e-02 0.185 -2.961 CCHCR1 coiled-coil alpha-helical rod protein 1 6 -31218194, -31218194, -2561482, -2561482, -2359996, -2359996 AB029343 6p21.3 Hs.485075 23

protein binding

nucleus

cytoplasm

protein export from nucleus

multicellular organismal development

cell differentiation

 
229666_s_at 0.399 5.679 2.812 1.299e-02 0.185 -2.961 CSTF3 cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa 11 -33119552, -33062705 AI653037 11p13 Hs.44402 15

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

intracellular

nucleus

mRNA polyadenylation

mRNA cleavage

 
221193_s_at -0.430 6.599 -2.812 1.300e-02 0.185 -2.962 ZCCHC10 zinc finger, CCHC domain containing 10 5 -132360575 NM_017665 5q31.1 Hs.29700 5

nucleic acid binding

zinc ion binding

metal ion binding

 
229963_at 0.357 3.927 2.812 1.300e-02 0.185 -2.962 BEX5 brain expressed, X-linked 5 X -101295335, -101295335 AV726956 Xq22.1 Hs.47209 5

cytoplasm

 
209295_at 0.601 6.131 2.812 1.301e-02 0.185 -2.962 TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 8 -22933592 AF016266 8p22-p21 Hs.521456 133

receptor activity

plasma membrane

activation of caspase activity

cell surface receptor linked signal transduction

activation of NF-kappaB-inducing kinase activity

induction of apoptosis via death domain receptors

activation of pro-apoptotic gene products

caspase activator activity

integral to membrane

regulation of apoptosis

positive regulation of I-kappaB kinase/NF-kappaB cascade

TRAIL binding

Cytokine-cytokine receptor interaction

p53 signaling pathway

Apoptosis

Natural killer cell mediated cytotoxicity

212579_at -0.657 6.023 -2.812 1.301e-02 0.185 -2.962 SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 18 2645885 AB014550 18p11.32 Hs.8118 6

protein binding

ATP binding

chromosome

chromosome organization

 
219284_at -0.507 7.040 -2.812 1.301e-02 0.185 -2.963 HSPBAP1 HSPB (heat shock 27kDa) associated protein 1 3 -123941535 NM_024610 3q21.1 Hs.29169 5

cytoplasm

 
203740_at 0.410 7.753 2.811 1.301e-02 0.185 -2.963 MPHOSPH6 M-phase phosphoprotein 6 16 -80739267 NM_005792 16q23.3 Hs.344400 11

M phase of mitotic cell cycle

protein binding

nucleus

nucleolus

cytoplasm

RNA degradation

222436_s_at -0.233 8.492 -2.811 1.303e-02 0.185 -2.964 VPS24 vacuolar protein sorting 24 homolog (S. cerevisiae) 2 -86584063 AF219226 2p24.3-p24.1 Hs.591582 25

protein binding

cytoplasm

endosome

cytosol

cell cycle

protein transport

membrane

late endosome membrane

cell division

Endocytosis

202804_at -0.456 7.373 -2.811 1.303e-02 0.185 -2.964 ABCC1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 16 15950934 AI539710 16p13.1 Hs.709181 163

nucleotide binding

transporter activity

ATP binding

membrane fraction

plasma membrane

integral to plasma membrane

transport

hydrolase activity

ATPase activity

response to drug

ATPase activity, coupled to transmembrane movement of substances

ABC transporters

221425_s_at -0.352 8.656 -2.811 1.303e-02 0.185 -2.964 ISCA1 iron-sulfur cluster assembly 1 homolog (S. cerevisiae) 9 -88069282 NM_030940 9q21.33 Hs.449291 9

structural molecule activity

iron ion binding

mitochondrion

iron-sulfur cluster assembly

metal ion binding

iron-sulfur cluster binding

 
214014_at 0.296 4.754 2.811 1.304e-02 0.185 -2.965 CDC42EP2 CDC42 effector protein (Rho GTPase binding) 2 11 64838906 W81196 11q13 Hs.343380 9

opioid peptide activity

Rho GTPase activator activity

protein binding

cytoplasm

cytoskeleton

plasma membrane

actin filament organization

regulation of cell shape

GTP-Rho binding

positive regulation of actin filament polymerization

positive regulation of pseudopodium assembly

positive regulation of protein complex assembly

 
201095_at 0.353 5.010 2.810 1.304e-02 0.185 -2.965 DAP death-associated protein 5 -10732341 NM_004394 5p15.2 Hs.75189 9

apoptosis

induction of apoptosis by extracellular signals

 
226209_at -0.485 7.066 -2.810 1.304e-02 0.185 -2.965 NDUFV3 NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa 21 43186446 AI129346 21q22.3 Hs.473937 16

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

transport

NADH dehydrogenase (ubiquinone) activity

membrane

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

217830_s_at -0.328 8.316 -2.810 1.305e-02 0.185 -2.965 NSFL1C NSFL1 (p97) cofactor (p47) 20 -1370810 AL109658 20p13 Hs.12865 20

protein binding

nucleus

Golgi apparatus

Golgi stack

lipid binding

 
207478_at -0.281 3.009 -2.810 1.305e-02 0.185 -2.965 PRO2958 hypothetical LOC100128329 2   NM_018546 2p24.3        
226022_at 0.507 8.084 2.810 1.305e-02 0.185 -2.965 SASH1 SAM and SH3 domain containing 1 6 148705421 AU144882 6q24.3 Hs.193133 12

protein binding

 
220968_s_at 0.287 7.434 2.810 1.305e-02 0.185 -2.965 TSPAN9 tetraspanin 9 12 3056817 NM_031285 12p13.33-p13.32 Hs.504517 8

membrane fraction

integral to plasma membrane

membrane

 
201635_s_at -0.500 9.811 -2.810 1.306e-02 0.185 -2.966 FXR1 fragile X mental retardation, autosomal homolog 1 3 182113145 AI990766 3q28 Hs.478407 30

RNA binding

nucleolus

cytoplasm

polysome

apoptosis

multicellular organismal development

muscle organ development

cell differentiation

 
202518_at -0.333 7.330 -2.809 1.307e-02 0.185 -2.967 BCL7B B-cell CLL/lymphoma 7B 7 -72588621 NM_001707 7q11.23 Hs.647051 8

actin binding

cellular_component

biological_process

 
213625_at 0.245 4.722 2.809 1.307e-02 0.185 -2.967 ZKSCAN4 zinc finger with KRAB and SCAN domains 4 6 -28320468 AW190088 6p21.33-p21.31 Hs.44720 6

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
233977_at 0.341 5.994 2.809 1.308e-02 0.185 -2.967 KIAA1772 KIAA1772 18 17076200 AB051559 18q11.1-q11.2 Hs.149020 4

membrane

integral to membrane

 
225681_at 0.810 5.907 2.809 1.309e-02 0.185 -2.968 CTHRC1 collagen triple helix repeat containing 1 8 104452961 AA584310 8q22.3 Hs.405614 7

extracellular region

proteinaceous extracellular matrix

 
1556864_at 0.243 6.183 2.809 1.309e-02 0.185 -2.968 TCTN1 tectonic family member 1 12 109536262 BC030993 12q24.11 Hs.211511 Hs.694390 5

extracellular region

multicellular organismal development

 
200020_at -0.429 8.553 -2.808 1.310e-02 0.185 -2.969 TARDBP TAR DNA binding protein 1 10995265 NM_007375 1p36.22 Hs.300624 Hs.635053 Hs.716809 92

nucleotide binding

transcription factor activity

RNA binding

protein binding

nucleus

nucleolus

transcription from RNA polymerase II promoter

mRNA processing

mitosis

microtubule binding

cell death

RNA splicing

regulation of transcription

 
228427_at 0.591 4.468 2.808 1.310e-02 0.185 -2.969 FBXO16 F-box protein 16 8 -28341847 BF196856 8p21.1 Hs.659190 5

modification-dependent protein catabolic process

 
210988_s_at -0.422 5.587 -2.808 1.310e-02 0.185 -2.969 PRUNE prune homolog (Drosophila) 1 149247596 AF123538 1q21 Hs.78524 8

inorganic diphosphatase activity

protein binding

nucleus

cytoplasm

focal adhesion

hydrolase activity

cell junction

manganese ion binding

metal ion binding

Purine metabolism

222853_at -1.227 5.561 -2.808 1.310e-02 0.185 -2.969 FLRT3 fibronectin leucine rich transmembrane protein 3 20 -14252642, -14252642 N71923 20p11 Hs.41296 9

receptor signaling protein activity

proteinaceous extracellular matrix

integral to plasma membrane

cell adhesion

biological_process

membrane

protein binding, bridging

 
212805_at 2.209 6.490 2.808 1.310e-02 0.185 -2.969 PRUNE2 prune homolog 2 (Drosophila) 9 -78416111 AB002365 9q21.2 Hs.262857 14

cytoplasm

apoptosis

induction of apoptosis

oxidoreductase activity

manganese ion binding

metal ion binding

transition metal ion binding

G1 phase

 
207977_s_at 0.647 7.245 2.808 1.311e-02 0.185 -2.969 DPT dermatopontin 1 -166931329 NM_001937 1q12-q23 Hs.80552 13

protein binding

extracellular region

proteinaceous extracellular matrix

cell adhesion

negative regulation of cell proliferation

collagen fibril organization

 
1558705_at 0.317 5.991 2.808 1.312e-02 0.185 -2.970 ATOH8 atonal homolog 8 (Drosophila) 2 85834419 AL831857 2p11.2 Hs.135569 Hs.436464 5

DNA binding

nucleus

multicellular organismal development

nervous system development

cell differentiation

transcription regulator activity

regulation of transcription

 
238066_at 0.721 5.873 2.807 1.314e-02 0.185 -2.972 RBP7 retinol binding protein 7, cellular 1 9979841 AI733027 1p36.22 Hs.422688 4

transporter activity

cytoplasm

transport

lipid binding

retinal binding

retinol binding

 
204431_at -0.279 6.607 -2.806 1.316e-02 0.186 -2.973 TLE2 transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila) 19 -2948636, -2948636, -2948636 NM_003260 19p13.3 Hs.332173 15

protein binding

nucleus

signal transduction

organ morphogenesis

Wnt receptor signaling pathway

regulation of transcription

 
225730_s_at 0.368 7.536 2.805 1.317e-02 0.186 -2.974 THUMPD3 THUMP domain containing 3 3 9379716 AI921788 3p25.3 Hs.443081 5

RNA binding

protein binding

methyltransferase activity

transferase activity

 
214873_at 0.254 3.851 2.805 1.318e-02 0.186 -2.974 LRP5L low density lipoprotein receptor-related protein 5-like 22 -24077385, -24077385 AL137651 22q11.23 Hs.634058 3

membrane

 
235312_s_at -1.165 6.808 -2.805 1.318e-02 0.186 -2.974 NRAP nebulin-related anchoring protein 10 -115338572 AA195854 10q24-q26 Hs.268788 14

actin binding

actin binding

protein binding

fascia adherens

muscle tendon junction

biological_process

zinc ion binding

metal ion binding

muscle alpha-actinin binding

 
204370_at -0.305 6.557 -2.805 1.319e-02 0.186 -2.975 CLP1 CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae) 11 57181791 NM_006831 11q12 Hs.523687 9

nucleotide binding

tRNA-intron endonuclease complex

magnesium ion binding

nuclear mRNA splicing, via spliceosome

ATP binding

ATP binding

GTP binding

nucleus

tRNA splicing, via endonucleolytic cleavage and ligation

nickel ion binding

kinase activity

transferase activity

manganese ion binding

RNA interference, targeting of mRNA for destruction

mRNA 3'-end processing

RNA interference, siRNA loading onto RISC

ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity

ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity

 
226277_at -0.366 7.980 -2.805 1.319e-02 0.186 -2.975 COL4A3BP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein 5 -74702683, -74702683 AA889952 5q13.3 Hs.270437 26

protein kinase activity

protein binding

cellular_component

cytoplasm

endoplasmic reticulum

Golgi apparatus

protein amino acid phosphorylation

lipid transport

immune response

 
218488_at 0.195 9.280 2.805 1.319e-02 0.186 -2.975 EIF2B3 eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa 1 -45089036 NM_020365 1p34.1 Hs.533549 25

translation initiation factor activity

guanyl-nucleotide exchange factor activity

guanyl-nucleotide exchange factor activity

protein binding

cytoplasm

eukaryotic translation initiation factor 2B complex

translational initiation

biosynthetic process

response to heat

response to heat

response to glucose stimulus

oligodendrocyte development

transferase activity

nucleotidyltransferase activity

negative regulation of translational initiation in response to stress

response to peptide hormone stimulus

cellular response to stimulus

 
213131_at -0.673 6.098 -2.805 1.319e-02 0.186 -2.976 OLFM1 olfactomedin 1 9 137106909, 137106923 R38389 9q34.3 Hs.522484 9

protein binding

endoplasmic reticulum

endoplasmic reticulum lumen

multicellular organismal development

nervous system development

membrane

 
1558168_at 0.205 4.033 2.804 1.320e-02 0.186 -2.976 C3orf47 chromosome 3 open reading frame 47 3 130517803 AL040547 3q21.3 Hs.450096 Hs.75307 5    
201454_s_at -0.436 9.084 -2.804 1.320e-02 0.186 -2.976 NPEPPS aminopeptidase puromycin sensitive 17 42963442 AW055008 17q21 Hs.443837 14

aminopeptidase activity

protein binding

nucleus

cytoplasm

cytosol

proteolysis

peptidase activity

metallopeptidase activity

zinc ion binding

metal ion binding

 
223993_s_at 0.338 9.370 2.804 1.321e-02 0.186 -2.976 CNIH4 cornichon homolog 4 (Drosophila) 1 222611217 AL136930 1q42.11 Hs.195403 Hs.445890 11

protein binding

endoplasmic reticulum

intracellular signaling cascade

membrane

integral to membrane

 
225682_s_at 0.200 6.785 2.804 1.322e-02 0.186 -2.977 POLR3H polymerase (RNA) III (DNA directed) polypeptide H (22.9kD) 22 -40251752, -40251751 AI587069 22q13.2 Hs.712617 10

DNA-directed RNA polymerase activity

nucleus

nucleoplasm

DNA-directed RNA polymerase III complex

transcription

transcription from RNA polymerase III promoter

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

226939_at -0.591 6.972 -2.804 1.322e-02 0.186 -2.977 CPEB2 cytoplasmic polyadenylation element binding protein 2 4 14614619 AI202327 4p15.33 Hs.656937 4

nucleotide binding

RNA binding

cytoplasm

regulation of translation

 
228058_at 0.221 4.060 2.804 1.323e-02 0.186 -2.978 ZG16B zymogen granule protein 16 homolog B (rat) 16 2820173 AI559190 16p13.3 Hs.105887 10

sugar binding

extracellular region

 
1558251_a_at 0.274 3.079 2.803 1.323e-02 0.186 -2.978 ZNF587 zinc finger protein 587 19 63053080 AK055448 19q13.43 Hs.642598 Hs.715493 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
210344_at 0.231 5.993 2.803 1.324e-02 0.186 -2.979 OSBPL7 oxysterol binding protein-like 7 17 -43239731 AF323729 17q21 Hs.463320 6

lipid transport

steroid metabolic process

 
220273_at 0.251 3.885 2.803 1.324e-02 0.186 -2.979 IL17B interleukin 17B 5 -148734022 NM_014443 5q32-q34 Hs.156979 9

signal transducer activity

cytokine activity

extracellular region

extracellular space

inflammatory response

immune response

cell-cell signaling

Cytokine-cytokine receptor interaction

233197_at 0.383 4.984 2.802 1.326e-02 0.186 -2.980 KLHL9 kelch-like 9 (Drosophila) 9 -21321017 AK022805 9p22 Hs.522029 Hs.701778 Hs.710126 4

protein binding

modification-dependent protein catabolic process

Ubiquitin mediated proteolysis

226961_at 0.303 3.995 2.802 1.326e-02 0.186 -2.980 PRR15 proline rich 15 7 29569951 AI347918 7p14.3 Hs.91109 3

multicellular organismal development

 
221870_at 0.357 7.153 2.802 1.326e-02 0.186 -2.980 EHD2 EH-domain containing 2 19 52908412 AI417917 19q13.3 Hs.719225 10

nucleotide binding

nucleic acid binding

GTPase activity

calcium ion binding

ATP binding

GTP binding

membrane fraction

nucleus

endosome

plasma membrane

endocytosis

hydrolase activity

protein domain specific binding

cortical actin cytoskeleton organization

Endocytosis

221925_s_at -0.387 5.022 -2.802 1.326e-02 0.186 -2.980 CSPP1 centrosome and spindle pole associated protein 1 8 68139156 BE044503 8q13.1-q13.2 Hs.370147 6

centrosome

microtubule

 
222838_at 0.425 2.920 2.802 1.327e-02 0.186 -2.981 SLAMF7 SLAM family member 7 1 158975700 AL121985 1q23.1-q24.1 Hs.517265 21

receptor activity

cell adhesion

membrane

integral to membrane

natural killer cell activation

natural killer cell mediated cytotoxicity

 
225803_at -0.962 10.166 -2.802 1.328e-02 0.186 -2.981 FBXO32 F-box protein 32 8 -124584538, -124584538 AW006123 8q24.13 Hs.403933 17

protein binding

modification-dependent protein catabolic process

 
244317_at 0.454 4.230 2.802 1.328e-02 0.186 -2.981 KIAA1324L KIAA1324-like 7 -86347173, -86347173 BF035563 7q21.12 Hs.208093 3

G-protein coupled receptor activity

protein binding

G-protein coupled receptor protein signaling pathway

membrane

integral to membrane

 
210075_at 0.428 7.352 2.801 1.328e-02 0.186 -2.982 MARCH2 membrane-associated ring finger (C3HC4) 2 19 8384186 AF151074 19p13.2 Hs.631861 10

lysosome

endosome

endoplasmic reticulum

endocytosis

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
201520_s_at -0.462 9.375 -2.801 1.328e-02 0.186 -2.982 GRSF1 G-rich RNA sequence binding factor 1 4 -71900362, -71900362 BF034561 4q13 Hs.309763 6

mRNA binding

cytoplasm

mRNA polyadenylation

 
219515_at -0.645 6.229 -2.801 1.329e-02 0.186 -2.982 PRDM10 PR domain containing 10 11 -129274810, -129274810 NM_020228 11q25 Hs.275086 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
244431_at 0.324 4.779 2.801 1.329e-02 0.186 -2.982 KILLIN killin protein 10 -89608897 AA057423 10q23 Hs.559820 2

DNA binding

nucleus

apoptosis

cell cycle

 
232346_at 0.318 4.903 2.800 1.331e-02 0.186 -2.984 LOC388692 hypothetical LOC388692 1 147546099 AW515373 1q21.2 Hs.271249 Hs.454790 Hs.719421 2    
213371_at -0.322 12.651 -2.800 1.332e-02 0.186 -2.984 LDB3 LIM domain binding 3 10 88418300, 88418405, 88418405 AI803302 10q22.3-q23.2 Hs.657271 15

protein binding

cytoplasm

cytoskeleton

zinc ion binding

Z disc

pseudopodium

metal ion binding

perinuclear region of cytoplasm

 
235836_at -0.407 4.401 -2.800 1.333e-02 0.186 -2.985 MXRA7 matrix-remodelling associated 7 17 -72187245, -72183403 N51413 17q25.1 Hs.250723 Hs.597019 Hs.707692 4

membrane

integral to membrane

 
222725_s_at -0.529 7.474 -2.799 1.334e-02 0.186 -2.985 PALMD palmdelphin 1 99884018 AI082747 1p22-p21 Hs.483993 7

cytoplasm

regulation of cell shape

membrane

 
235153_at -0.276 4.633 -2.799 1.335e-02 0.186 -2.986 RNF183 ring finger protein 183 9 -115099193 BE796148 9q32 Hs.211374 4

protein binding

zinc ion binding

membrane

integral to membrane

metal ion binding

 
213940_s_at 0.276 6.598 2.799 1.335e-02 0.186 -2.986 FNBP1 formin binding protein 1 9 -131689286 AU145053 9q34 Hs.189409 25

cytoplasm

lysosome

cytoskeleton

plasma membrane

cell cortex

endocytosis

lipid binding

cytoplasmic vesicle

identical protein binding

 
206271_at 0.258 3.162 2.799 1.335e-02 0.186 -2.986 TLR3 toll-like receptor 3 4 187227302 NM_003265 4q35 Hs.657724 158

double-stranded RNA binding

double-stranded RNA binding

transmembrane receptor activity

protein binding

endosome

endoplasmic reticulum

integral to plasma membrane

inflammatory response

hyperosmotic response

signal transduction

activation of NF-kappaB-inducing kinase activity

detection of virus

endosome membrane

endosome membrane

membrane

positive regulation of interleukin-6 production

positive regulation of tumor necrosis factor production

defense response to bacterium

positive regulation of I-kappaB kinase/NF-kappaB cascade

response to exogenous dsRNA

positive regulation of interferon-gamma biosynthetic process

positive regulation of chemokine biosynthetic process

innate immune response

positive regulation of interferon-alpha biosynthetic process

positive regulation of interferon-beta biosynthetic process

positive regulation of interferon-beta biosynthetic process

negative regulation of osteoclast differentiation

positive regulation of JNK cascade

positive regulation of NF-kappaB transcription factor activity

Toll-like receptor signaling pathway

222642_s_at -0.420 5.374 -2.799 1.336e-02 0.186 -2.987 TMEM33 transmembrane protein 33 4 41631893 BC000948 4p13 Hs.31082 5

protein binding

biological_process

membrane

integral to membrane

melanosome

 
213418_at 0.386 5.019 2.799 1.336e-02 0.186 -2.987 HSPA6 heat shock 70kDa protein 6 (HSP70B') 1 159760659 NM_002155 1q23 Hs.654614 24

nucleotide binding

ATP binding

response to unfolded protein

MAPK signaling pathway

Endocytosis

Antigen processing and presentation

1564537_a_at 0.348 6.672 2.798 1.336e-02 0.186 -2.987 ASB10 ankyrin repeat and SOCS box-containing 10 7 -150503717, -150503717 AK055536 7q36.1 Hs.647081 6

intracellular signaling cascade

modification-dependent protein catabolic process

 
212409_s_at -0.577 5.992 -2.798 1.336e-02 0.186 -2.987 TOR1AIP1 torsin A interacting protein 1 1 178118042 AK021613 1q24.2 Hs.496459 9

nucleus

membrane

integral to membrane

 
219981_x_at 0.263 7.115 2.798 1.337e-02 0.186 -2.987 ZNF587 zinc finger protein 587 19 63053080 NM_017961 19q13.43 Hs.642598 Hs.715493 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
224796_at 0.319 6.708 2.798 1.337e-02 0.186 -2.987 ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 8 -131133534 W03103 8q24.1-q24.2 Hs.655552 19

protein binding

cytoplasm

ARF GTPase activator activity

zinc ion binding

membrane

regulation of ARF GTPase activity

metal ion binding

Endocytosis

Fc gamma R-mediated phagocytosis

222623_s_at -0.459 7.764 -2.798 1.337e-02 0.186 -2.988 ZNF639 zinc finger protein 639 3 180524244 BF001614 3q26.33 Hs.632578 5

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
208148_at -0.366 5.119 -2.797 1.339e-02 0.186 -2.989 MYH4 myosin, heavy chain 4, skeletal muscle 17 -10287332 NM_017533 17p13.1 Hs.711141 9

microfilament motor activity

nucleotide binding

actin binding

calmodulin binding

ATP binding

cytoplasm

striated muscle thick filament

striated muscle contraction

structural constituent of muscle

response to activity

myosin complex

actin filament-based movement

muscle filament sliding

Tight junction

232662_x_at 0.338 7.435 2.797 1.340e-02 0.187 -2.990 C10orf58 chromosome 10 open reading frame 58 10 82158221, 82163570 AK022598 10q23.1 Hs.500333 Hs.718589 10

extracellular region

 
230015_at 0.252 4.649 2.797 1.340e-02 0.187 -2.990 PRCD progressive rod-cone degeneration 17 72047715 AV729651 17q25.1 Hs.634380 3

cytoplasm

visual perception

membrane

integral to membrane

response to stimulus

 
226951_at -0.581 6.202 -2.797 1.341e-02 0.187 -2.990 C2orf49 chromosome 2 open reading frame 49 2 105320444 AI741415 2q12.1 Hs.549577 4

molecular_function

cellular_component

biological_process

 
1564679_at -0.750 6.700 -2.796 1.342e-02 0.187 -2.991 ASB15 ankyrin repeat and SOCS box-containing 15 7 123036347 AF403033 7q31.31 Hs.83916 6

intracellular signaling cascade

modification-dependent protein catabolic process

 
216468_s_at 0.468 2.068 2.796 1.344e-02 0.187 -2.992 ZNF682 zinc finger protein 682 19 -19976226, -19976226 AC006539 19p12 Hs.306298 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
209034_at -0.421 10.368 -2.794 1.347e-02 0.187 -2.994 PNRC1 proline-rich nuclear receptor coactivator 1 6 89847147 AF279899 6q15 Hs.703798 Hs.75969 11

protein binding

nucleus

regulation of transcription

 
200697_at -0.325 9.866 -2.794 1.347e-02 0.187 -2.995 HK1 hexokinase 1 10 70699761, 70745615, 70748608 NM_000188 10q22 Hs.370365 40

nucleotide binding

hexokinase activity

hexokinase activity

ATP binding

mitochondrion

mitochondrial outer membrane

cytosol

cytosol

carbohydrate metabolic process

glycolysis

membrane

kinase activity

transferase activity

Glycolysis / Gluconeogenesis

Fructose and mannose metabolism

Galactose metabolism

Starch and sucrose metabolism

Amino sugar and nucleotide sugar metabolism

Streptomycin biosynthesis

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

Insulin signaling pathway

Type II diabetes mellitus

214883_at -0.218 5.062 -2.794 1.348e-02 0.187 -2.995 THRA thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian) 17 35472588, 35472685 X55005 17q11.2 Hs.724 95

transcription factor activity

steroid hormone receptor activity

thyroid hormone receptor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

zinc ion binding

hormone-mediated signaling

regulation of specific transcription from RNA polymerase II promoter

promoter binding

metal ion binding

Neuroactive ligand-receptor interaction

200030_s_at 0.232 12.848 2.794 1.348e-02 0.187 -2.995 SLC25A3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 12 97511533 NM_002635 12q23 Hs.290404 16

binding

mitochondrion

mitochondrial inner membrane

integral to plasma membrane

generation of precursor metabolites and energy

transport

symporter activity

phosphate carrier activity

membrane

 
208205_at 0.261 4.128 2.794 1.349e-02 0.187 -2.996 PCDHA9 protocadherin alpha 9 5 140207540, 140207540 NM_014005 5q31 Hs.199343 11

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

 
222515_x_at 0.298 5.025 2.793 1.350e-02 0.187 -2.996 TMEM165 transmembrane protein 165 4 55956846 AI671397 4q12 Hs.479766 6

membrane

integral to membrane

 
228357_at -0.419 5.296 -2.792 1.353e-02 0.187 -2.998 UNK unkempt homolog (Drosophila) 17 71292275 BE966979 17q25.1 Hs.584768 5

nucleic acid binding

protein binding

zinc ion binding

metal ion binding

 
1569291_at -0.201 6.063 -2.792 1.353e-02 0.187 -2.999 CROCCL1 ciliary rootlet coiled-coil, rootletin-like 1 1 -16817339 BC015342 1p36.13 Hs.631865 2    
210300_at 0.232 6.099 2.792 1.355e-02 0.188 -3.000 REM1 RAS (RAD and GEM)-like GTP-binding 1 20 29526765 AF152863 20q11.21 Hs.247729 8

nucleotide binding

calmodulin binding

GTP binding

small GTPase mediated signal transduction

 
201788_at -0.303 8.244 -2.791 1.356e-02 0.188 -3.000 DDX42 DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 17 59205298 NM_007372 17q23.3 Hs.702010 10

nucleotide binding

RNA binding

helicase activity

ATP binding

nucleus

ATP-dependent helicase activity

Cajal body

nuclear speck

hydrolase activity

 
241809_at 0.436 5.959 2.791 1.356e-02 0.188 -3.001 C1orf183 chromosome 1 open reading frame 183 1 -112069892, -112069892 BE906233 1p13.2 Hs.193406 Hs.657857 3    
218027_at 0.302 10.581 2.791 1.357e-02 0.188 -3.001 MRPL15 mitochondrial ribosomal protein L15 8 55210333 NM_014175 8q11.2-q13 Hs.18349 12

structural constituent of ribosome

intracellular

mitochondrion

ribosome

translation

large ribosomal subunit

 
34858_at -0.325 6.911 -2.790 1.358e-02 0.188 -3.002 KCTD2 potassium channel tetramerisation domain containing 2 17 70554873 D79998 17q25.1 Hs.514468 5

voltage-gated potassium channel activity

protein binding

potassium ion transport

voltage-gated potassium channel complex

membrane

 
203683_s_at 0.387 6.853 2.790 1.359e-02 0.188 -3.002 VEGFB vascular endothelial growth factor B 11 63758841 NM_003377 11q13 Hs.78781 23

regulation of cell growth

vascular endothelial growth factor receptor binding

protein binding

extracellular region

extracellular region

signal transduction

growth factor activity

heparin binding

positive regulation of cell proliferation

membrane

platelet alpha granule lumen

Cytokine-cytokine receptor interaction

mTOR signaling pathway

Focal adhesion

Pathways in cancer

Renal cell carcinoma

Pancreatic cancer

Bladder cancer

219645_at -0.301 12.238 -2.790 1.360e-02 0.188 -3.003 CASQ1 calsequestrin 1 (fast-twitch, skeletal muscle) 1 158426908 NM_001231 1q21 Hs.632476 12

calcium ion binding

mitochondrion

mitochondrial matrix

smooth endoplasmic reticulum

sarcoplasmic reticulum lumen

 
238140_at 0.369 3.468 2.790 1.360e-02 0.188 -3.003 ARV1 ARV1 homolog (S. cerevisiae) 1 229181445 AI346356 1q42.2 Hs.275736 6

lipid metabolic process

sphingolipid metabolic process

membrane

integral to membrane

 
210401_at 0.571 6.348 2.790 1.361e-02 0.188 -3.004 P2RX1 purinergic receptor P2X, ligand-gated ion channel, 1 17 -3746633 U45448 17p13.3 Hs.41735 42

purinergic nucleotide receptor activity

serotonin secretion by platelet

regulation of vascular smooth muscle contraction

receptor activity

ATP-gated cation channel activity

calcium channel activity

protein binding

ATP binding

plasma membrane

plasma membrane

integral to plasma membrane

activation of caspase activity

signal transduction

insemination

regulation of blood pressure

death

synaptosome

platelet activation

external side of cell outer membrane

response to ATP

synaptic transmission, glutamatergic

vasoconstriction

protein homodimerization activity

positive regulation of ion transport

membrane raft

postsynaptic membrane

ceramide biosynthetic process

protein heterodimerization activity

response to stimulus

regulation of calcium ion transport

Calcium signaling pathway

Neuroactive ligand-receptor interaction

221601_s_at 1.021 4.906 2.789 1.361e-02 0.188 -3.004 FAIM3 Fas apoptotic inhibitory molecule 3 1 -205143252, -205143252 AI084226 1q32.1 Hs.58831 Hs.719320 10

nucleus

cytoplasm

plasma membrane

focal adhesion

anti-apoptosis

immune response

cellular defense response

integral to membrane

 
AFFX-HUMGAPDH/M33197_M_at -0.225 13.668 -2.788 1.365e-02 0.188 -3.006 GAPDH glyceraldehyde-3-phosphate dehydrogenase 12 6513917 AFFX-HUMGAPDH/M33197_M 12p13 Hs.544577 Hs.592355 Hs.598320 130

glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity

protein binding

cytoplasm

glucose metabolic process

glycolysis

membrane

oxidoreductase activity

perinuclear region of cytoplasm

NAD or NADH binding

oxidation reduction

Glycolysis / Gluconeogenesis

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

Alzheimer's disease

1555229_a_at 0.388 3.109 2.788 1.365e-02 0.188 -3.006 C1S complement component 1, s subcomponent 12 7038240 BC007010 12p13 Hs.458355 42

serine-type endopeptidase activity

calcium ion binding

extracellular region

proteolysis

complement activation, classical pathway

peptidase activity

innate immune response

Complement and coagulation cascades

Systemic lupus erythematosus

238853_at 0.467 5.489 2.788 1.365e-02 0.188 -3.006 RAB3IP RAB3A interacting protein (rabin3) 12 68418897, 68419446, 68459020 AI436813 12q14.3 Hs.258209 11

guanyl-nucleotide exchange factor activity

protein binding

protein binding

nucleus

cytoplasm

cytosol

protein transport

 
200959_at 0.317 8.375 2.788 1.366e-02 0.188 -3.007 FUS fusion (involved in t(12;16) in malignant liposarcoma) 16 31098953 NM_004960 16p11.2 Hs.513522 55

nuclear mRNA splicing, via spliceosome

DNA binding

RNA binding

protein binding

intracellular

nucleus

nucleolus

cell death

zinc ion binding

metal ion binding

 
239482_x_at 0.288 5.646 2.788 1.366e-02 0.188 -3.007 ZNF708 zinc finger protein 708 19 -21265802 BF223715 19p12 Hs.466296 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
222640_at -0.374 6.993 -2.787 1.366e-02 0.188 -3.007 DNMT3A DNA (cytosine-5-)-methyltransferase 3 alpha 2 -25357824, -25309348, -25309348, -25309348 N26002 2p23 Hs.515840 54

euchromatin

DNA binding

DNA (cytosine-5-)-methyltransferase activity

protein binding

nucleus

cytoplasm

DNA methylation

genetic imprinting

methyltransferase activity

zinc ion binding

nuclear matrix

transferase activity

metal ion binding

Cysteine and methionine metabolism

Metabolic pathways

229578_at -0.448 9.090 -2.787 1.367e-02 0.188 -3.008 JPH2 junctophilin 2 20 -42238870, -42173750 AA716165 20q13.12 Hs.441737 11

protein binding

membrane fraction

microsome

plasma membrane

junctional sarcoplasmic reticulum membrane

integral to membrane

sarcoplasmic reticulum

Z disc

regulation of ryanodine-sensitive calcium-release channel activity

calcium ion transport into cytosol

 
236253_at 0.253 4.419 2.787 1.367e-02 0.188 -3.008 ZNF546 zinc finger protein 546 19 45194782 BE548749 19q13.2 Hs.709400 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
201262_s_at 0.238 4.882 2.787 1.367e-02 0.188 -3.008 BGN biglycan X 152413604 NM_001711 Xq28 Hs.821 63

extracellular matrix structural constituent

protein binding

extracellular region

proteinaceous extracellular matrix

biological_process

transport vesicle

 
217628_at -0.727 6.155 -2.787 1.367e-02 0.188 -3.008 CLIC5 chloride intracellular channel 5 6 -45974165, -45974165 BF032808 6p21.1-p12.1 Hs.485489 15

voltage-gated ion channel activity

voltage-gated chloride channel activity

protein binding

insoluble fraction

cytoplasm

Golgi apparatus

centrosome

cell cortex

ion transport

chloride transport

female pregnancy

actin cytoskeleton

membrane

integral to membrane

chloride ion binding

chloride channel complex

 
200967_at 0.519 7.624 2.787 1.368e-02 0.188 -3.008 PPIB peptidylprolyl isomerase B (cyclophilin B) 15 -62235066 NM_000942 15q21-q22 Hs.434937 41

peptidyl-prolyl cis-trans isomerase activity

endoplasmic reticulum

endoplasmic reticulum lumen

protein folding

isomerase activity

peptide binding

melanosome

unfolded protein binding

 
229468_at 0.298 5.973 2.786 1.370e-02 0.188 -3.009 CDK3 cyclin-dependent kinase 3 17 71508581 AI885421 17q22-qter Hs.706766 21

nucleotide binding

cyclin-dependent protein kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

cell cycle

mitosis

cell proliferation

transferase activity

cell division

 
227058_at 0.275 6.071 2.786 1.371e-02 0.189 -3.011 C13orf33 chromosome 13 open reading frame 33 13 30378311 AW084730 13q12.3 Hs.646647 Hs.708377 4    
206082_at 0.489 5.129 2.786 1.372e-02 0.189 -3.011 HCP5 HLA complex P5 6 31538935, 2877117 NM_006674 6p21.3 Hs.654480 12

defense response

 
225087_at -0.516 8.708 -2.785 1.373e-02 0.189 -3.012 C16orf63 chromosome 16 open reading frame 63 16 -15867077 AA524072 16p13.11 Hs.514179 3    
231808_at -0.354 6.965 -2.785 1.373e-02 0.189 -3.012 LOC729082 hypothetical protein LOC729082 15 39363492 AY007106 15q15.1 Hs.380164 2    
213762_x_at -0.372 8.528 -2.785 1.373e-02 0.189 -3.012 RBMX RNA binding motif protein, X-linked X -135783284 AI452524 Xq26.3 Hs.380118 Hs.710162 32

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

spliceosomal complex

biological_process

RNA splicing

heterogeneous nuclear ribonucleoprotein complex

 
241405_at -0.417 5.644 -2.785 1.374e-02 0.189 -3.012 LOC400604 hypothetical gene supported by BC039664 17   AI085535 17q21.33 Hs.641441 1    
220664_at 0.216 3.974 2.785 1.374e-02 0.189 -3.012 SPRR2C small proline-rich protein 2C (pseudogene) 1 -151379217 NM_006518 1q21-q22 Hs.2421 5    
223749_at 0.413 4.696 2.785 1.374e-02 0.189 -3.013 C1QTNF2 C1q and tumor necrosis factor related protein 2 5 -159707352 AF329836 5q33.3 Hs.110062 3

activation of MAPK activity

receptor binding

extracellular region

extracellular space

positive regulation of glycogen biosynthetic process

positive regulation of fatty acid oxidation

positive regulation of glucose import

protein homooligomerization

 
227946_at -0.538 6.896 -2.785 1.374e-02 0.189 -3.013 OSBPL7 oxysterol binding protein-like 7 17 -43239731 AI955239 17q21 Hs.463320 6

lipid transport

steroid metabolic process

 
215313_x_at 0.659 10.617 2.784 1.375e-02 0.189 -3.013 HLA-A major histocompatibility complex, class I, A 6 30018309, 1358588, 1157055 AA573862 6p21.3 Hs.181244 Hs.713441 857

Golgi membrane

antigen processing and presentation of peptide antigen via MHC class I

protein binding

integral to plasma membrane

immune response

immune response

membrane

integral to membrane

antigen processing and presentation

early endosome membrane

MHC class I receptor activity

MHC class I protein complex

interspecies interaction between organisms

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

225158_at -0.461 8.088 -2.784 1.375e-02 0.189 -3.013 GFM1 G elongation factor, mitochondrial 1 3 159845010 BF978647 3q25.1-q26.2 Hs.518355 11

nucleotide binding

translation elongation factor activity

GTPase activity

GTP binding

intracellular

mitochondrion

translational elongation

 
212432_at 0.321 8.426 2.784 1.375e-02 0.189 -3.013 GRPEL1 GrpE-like 1, mitochondrial (E. coli) 4 -7112680 AL542571 4p16 Hs.443723 6

adenyl-nucleotide exchange factor activity

mitochondrion

mitochondrial matrix

protein folding

protein import into mitochondrial matrix

protein homodimerization activity

unfolded protein binding

chaperone binding

 
241926_s_at 0.468 4.334 2.784 1.375e-02 0.189 -3.013 ERG v-ets erythroblastosis virus E26 oncogene homolog (avian) 21 -38673821, -38673821 AA296657 21q22.3 Hs.473819 66

transcription factor activity

signal transducer activity

protein binding

nucleus

regulation of transcription, DNA-dependent

protein amino acid phosphorylation

signal transduction

multicellular organismal development

cell proliferation

sequence-specific DNA binding

 
231767_at 0.260 6.338 2.784 1.377e-02 0.189 -3.014 HOXB4 homeobox B4 17 -44007867 AL137449 17q21-q22 Hs.664706 28

negative regulation of transcription from RNA polymerase II promoter

morphogenesis of an epithelial sheet

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

cell proliferation

anterior/posterior pattern formation

transcription repressor activity

sequence-specific DNA binding

somatic stem cell division

spleen development

bone marrow development

embryonic skeletal system morphogenesis

definitive hemopoiesis

 
203232_s_at -0.513 7.933 -2.783 1.377e-02 0.189 -3.015 ATXN1 ataxin 1 6 -16407321 NM_000332 6p23 Hs.434961 Hs.712106 65

RNA binding

nucleus

nucleoplasm

nucleolus

cytoplasm

RNA processing

protein C-terminus binding

cell death

poly(U) RNA binding

adult locomotory behavior

visual learning

nuclear matrix

negative regulation of transcription

transcription repressor activity

poly(G) RNA binding

nuclear RNA export factor complex

negative regulation of phosphorylation

nuclear inclusion body

identical protein binding

negative regulation of insulin-like growth factor receptor signaling pathway

protein self-association

positive regulation of transcription from RNA polymerase II promoter

nuclear export

regulation of excitatory postsynaptic membrane potential

 
232154_at 0.278 4.985 2.783 1.378e-02 0.189 -3.015 LOC199800 hypothetical protein LOC199800 19 54883753 AL359598 19q13.33 Hs.311193 Hs.607562 1    
48531_at -0.392 7.471 -2.783 1.378e-02 0.189 -3.015 TNIP2 TNFAIP3 interacting protein 2 4 -2713184, -2713184 AA522816 4p16.3 Hs.719161 20

protein binding

cytoplasm

I-kappaB kinase/NF-kappaB cascade

 
1556736_at 0.225 4.380 2.783 1.380e-02 0.189 -3.016 LOC100129858 hypothetical protein LOC100129858 4   AK095554 4q31.1 Hs.660477 1    
204725_s_at -0.381 7.380 -2.782 1.380e-02 0.189 -3.017 NCK1 NCK adaptor protein 1 3 138063762 NM_006153 3q21 Hs.477693 110

receptor binding

cytoplasm

endoplasmic reticulum

regulation of translation

actin filament organization

signal complex assembly

cytoskeletal adaptor activity

vesicle membrane

cell migration

protein domain specific binding

lamellipodium assembly

receptor signaling complex scaffold activity

positive regulation of actin filament polymerization

positive regulation of T cell proliferation

T cell activation

ErbB signaling pathway

Axon guidance

T cell receptor signaling pathway

Pathogenic Escherichia coli infection - EHEC

201152_s_at -0.490 10.284 -2.782 1.382e-02 0.189 -3.017 MBNL1 muscleblind-like (Drosophila) 3 153468518, 153499883 N31913 3q25 Hs.478000 Hs.558914 21

in utero embryonic development

double-stranded RNA binding

nucleus

cytoplasm

nervous system development

muscle organ development

zinc ion binding

embryonic limb morphogenesis

myoblast differentiation

metal ion binding

 
207700_s_at -0.700 7.525 -2.782 1.382e-02 0.189 -3.018 NCOA3 nuclear receptor coactivator 3 20 45564063 NM_006534 20q12 Hs.592142 140

transcription coactivator activity

histone acetyltransferase activity

signal transducer activity

nucleus

cytoplasm

signal transduction

acyltransferase activity

transferase activity

androgen receptor signaling pathway

transcription regulator activity

positive regulation of transcription, DNA-dependent

thyroid hormone receptor binding

protein N-terminus binding

androgen receptor binding

 
242608_x_at -0.297 8.275 -2.781 1.384e-02 0.189 -3.019 FAM161B family with sequence similarity 161, member B 14 -73470457 AW517479 14q24.3 Hs.660789 4    
213982_s_at 0.585 4.676 2.781 1.385e-02 0.189 -3.019 RABGAP1L RAB GTPase activating protein 1-like 1 172395256, 173111306 BG107203 1q24 Hs.585378 9

GTPase activator activity

Rab GTPase activator activity

intracellular

regulation of Rab GTPase activity

 
240456_at 0.319 4.199 2.781 1.385e-02 0.189 -3.019 ANKRD55 ankyrin repeat domain 55 5 -55431263, -55431263 AA459699 5q11.2 Hs.436214 5    
207318_s_at -0.285 7.100 -2.781 1.385e-02 0.189 -3.020 CDC2L5 cell division cycle 2-like 5 (cholinesterase-related cell division controller) 7 39956483 AJ297710 7p13 Hs.233552 18

nucleotide binding

cyclin-dependent protein kinase activity

ATP binding

protein amino acid phosphorylation

regulation of mitosis

multicellular organismal development

positive regulation of cell proliferation

transferase activity

 
209438_at 0.428 5.146 2.781 1.385e-02 0.189 -3.020 PHKA2 phosphorylase kinase, alpha 2 (liver) X -18820336 AL096700 Xp22.2-p22.1 Hs.54941 Hs.607628 Hs.622882 29

catalytic activity

phosphorylase kinase activity

calmodulin binding

plasma membrane

phosphorylase kinase complex

carbohydrate metabolic process

glycogen metabolic process

generation of precursor metabolites and energy

protein modification process

Calcium signaling pathway

Insulin signaling pathway

65133_i_at 0.517 4.339 2.781 1.386e-02 0.189 -3.020 INO80B INO80 complex subunit B 2 74535706 AI862454 2p13.1 Hs.410786 7

nucleus

nucleolus

zinc ion binding

metal ion binding

 
213578_at -0.328 6.972 -2.780 1.386e-02 0.189 -3.020 BMPR1A bone morphogenetic protein receptor, type IA 10 88506375 AI678679 10q22.3 Hs.524477 70

nucleotide binding

magnesium ion binding

mesoderm formation

Mullerian duct regression

positive regulation of mesenchymal cell proliferation

protein serine/threonine kinase activity

receptor activity

transforming growth factor beta receptor activity

ATP binding

plasma membrane

plasma membrane

caveola

protein amino acid phosphorylation

immune response

transforming growth factor beta receptor signaling pathway

pattern specification process

ectoderm development

heart development

dorsal/ventral axis specification

anterior/posterior pattern formation

positive regulation of pathway-restricted SMAD protein phosphorylation

integral to membrane

transferase activity

stem cell maintenance

manganese ion binding

cell differentiation

lung development

positive regulation of bone mineralization

BMP signaling pathway

BMP signaling pathway

hindlimb morphogenesis

odontogenesis of dentine-containing tooth

protein homodimerization activity

positive regulation of osteoblast differentiation

SMAD binding

mesendoderm development

embryonic morphogenesis

positive regulation of epithelial cell proliferation

negative regulation of neurogenesis

cartilage development

palate development

positive regulation of SMAD protein nuclear translocation

Cytokine-cytokine receptor interaction

TGF-beta signaling pathway

207188_at 0.272 5.404 2.780 1.386e-02 0.189 -3.021 CDK3 cyclin-dependent kinase 3 17 71508581 NM_001258 17q22-qter Hs.706766 21

nucleotide binding

cyclin-dependent protein kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

cell cycle

mitosis

cell proliferation

transferase activity

cell division

 
223072_s_at 0.252 7.061 2.780 1.386e-02 0.189 -3.021 WBP1 WW domain binding protein 1 2 74539084 U79457 2p12 Hs.516114 9

protein binding

protein binding

biological_process

integral to membrane

WW domain binding

WW domain binding

 
1557633_at -0.297 4.525 -2.780 1.387e-02 0.189 -3.021 POM121L8P POM121 membrane glycoprotein-like 8 (rat) pseudogene 22 19966713 BC035394 22q11.2 Hs.318898 Hs.645245 Hs.648261 Hs.648270 4    
227420_at 0.326 5.645 2.780 1.387e-02 0.189 -3.021 TNFAIP8L1 tumor necrosis factor, alpha-induced protein 8-like 1 19 4590529 BF338045 19p13.3 Hs.465643 3    
204879_at -0.338 5.889 -2.779 1.389e-02 0.189 -3.022 PDPN podoplanin 1 13782838, 13784553 NM_006474 1p36.21 Hs.468675 48

cell morphogenesis

ruffle

lymphangiogenesis

plasma membrane

integral to plasma membrane

prostaglandin metabolic process

water transport

cell cycle

signal transduction

multicellular organismal development

cell proliferation

regulation of cell shape

folic acid transporter activity

amino acid transmembrane transporter activity

water channel activity

folic acid transport

cell-cell adhesion

lamellipodium

filopodium

positive regulation of cell migration

tube morphogenesis

lung alveolus development

 
1557545_s_at 0.414 2.649 2.779 1.390e-02 0.189 -3.023 RNF165 ring finger protein 165 18 42168184 BF529886 18q21.1 Hs.501114 4

protein binding

zinc ion binding

metal ion binding

 
207067_s_at 0.215 4.696 2.779 1.390e-02 0.189 -3.023 HDC histidine decarboxylase 15 -48321437 NM_002112 15q21-q22 Hs.1481 37

histidine decarboxylase activity

cellular amino acid and derivative metabolic process

histidine metabolic process

lyase activity

carboxylic acid metabolic process

pyridoxal phosphate binding

catecholamine biosynthetic process

Histidine metabolism

Biosynthesis of alkaloids derived from histidine and purine

Metabolic pathways

205292_s_at -0.297 10.479 -2.779 1.391e-02 0.189 -3.024 HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 7 -26196080 NM_002137 7p15 Hs.487774 54

nucleotide binding

nuclear mRNA splicing, via spliceosome

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

nucleoplasm

spliceosomal complex

nucleolus

cytoplasm

RNA splicing

heterogeneous nuclear ribonucleoprotein complex

single-stranded telomeric DNA binding

RNA transport

 
209929_s_at 0.305 6.944 2.778 1.393e-02 0.189 -3.025 IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma X 153423652, 153428755, 153428755, 153429255 AF091453 Xq28 Hs.43505 122

signal transducer activity

protein binding

nucleus

cytosol

induction of apoptosis

immune response

I-kappaB kinase/NF-kappaB cascade

zinc ion binding

IkappaB kinase complex

interspecies interaction between organisms

regulation of transcription

metal ion binding

T cell receptor signaling pathway

T cell receptor signaling pathway

MAPK signaling pathway

Chemokine signaling pathway

Apoptosis

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

T cell receptor signaling pathway

B cell receptor signaling pathway

Adipocytokine signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Pancreatic cancer

Prostate cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Small cell lung cancer

Primary immunodeficiency

203320_at 1.060 6.515 2.778 1.393e-02 0.189 -3.025 SH2B3 SH2B adaptor protein 3 12 110328134 NM_005475 12q24 Hs.506784 22

signal transducer activity

protein binding

intracellular signaling cascade

Neurotrophin signaling pathway

221522_at -0.530 6.708 -2.778 1.393e-02 0.189 -3.025 ANKRD27 ankyrin repeat domain 27 (VPS9 domain) 19 -37779746 AL136784 19q13.11 Hs.59236 12

guanyl-nucleotide exchange factor activity

GTPase activator activity

protein binding

cytoplasm

lysosome

early endosome

early endosome to late endosome transport

 
204392_at 0.267 4.782 2.778 1.393e-02 0.189 -3.025 CAMK1 calcium/calmodulin-dependent protein kinase I 3 -9774030 NM_003656 3p25.3 Hs.434875 31

nucleotide binding

calmodulin-dependent protein kinase activity

calmodulin binding

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

nucleocytoplasmic transport

signal transduction

multicellular organismal development

nervous system development

transferase activity

cell differentiation

 
226797_at -0.435 6.989 -2.778 1.394e-02 0.189 -3.025 MBTD1 mbt domain containing 1 17 -46609784 AL133577 17q21.33 Hs.656803 2

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
231798_at 0.614 5.036 2.777 1.395e-02 0.189 -3.026 NOG noggin 17 52026058 AL575177 17q21-q22 Hs.248201 48

osteoblast differentiation

ureteric bud development

epithelial to mesenchymal transition

extracellular region

extracellular region

extracellular space

pattern specification process

brain development

dorsal/ventral pattern formation

cytokine binding

negative regulation of BMP signaling pathway

prostate gland development

somatic stem cell maintenance

wound healing

middle ear morphogenesis

embryonic digit morphogenesis

protein homodimerization activity

negative regulation of cell differentiation

notochord morphogenesis

anatomical structure formation involved in morphogenesis

embryonic skeletal system development

negative regulation of astrocyte differentiation

mesenchymal cell differentiation

positive regulation of epithelial cell proliferation

cartilage development

negative regulation of cardiac muscle cell proliferation

limb development

embryonic skeletal joint morphogenesis

negative regulation of cytokine activity

TGF-beta signaling pathway

1570344_at 0.270 4.362 2.777 1.395e-02 0.189 -3.026 LRPPRC leucine-rich PPR-motif containing 2 -43966866 BG772870 2p21 Hs.368084 15

condensed nuclear chromosome

DNA binding

single-stranded DNA binding

RNA binding

protein binding

nucleus

nuclear inner membrane

nuclear outer membrane

nucleoplasm

cytoplasm

mitochondrion

cytoskeleton

transport

microtubule binding

membrane

mitochondrial nucleoid

regulation of transcription

mitochondrion transport along microtubule

perinuclear region of cytoplasm

beta-tubulin binding

actin filament binding

mRNA transport

 
202239_at 0.463 6.553 2.777 1.395e-02 0.189 -3.027 PARP4 poly (ADP-ribose) polymerase family, member 4 13 -23893068 NM_006437 13q11 Hs.718412 22

DNA binding

NAD+ ADP-ribosyltransferase activity

intracellular

nucleus

cytoplasm

DNA repair

protein modification process

protein amino acid ADP-ribosylation

transport

inflammatory response

response to DNA damage stimulus

cell death

transferase activity, transferring glycosyl groups

enzyme binding

ribonucleoprotein complex

response to drug

Base excision repair

214475_x_at -0.528 9.392 -2.777 1.397e-02 0.190 -3.027 CAPN3 calpain 3, (p94) 15 40427592, 40438989, 40481879, 40484268 AF127764 15q15.1-q21.1 Hs.143261 66

calcium-dependent cysteine-type endopeptidase activity

signal transducer activity

calcium ion binding

intracellular

cytoplasm

proteolysis

muscle organ development

peptidase activity

 
218175_at 0.300 8.233 2.777 1.397e-02 0.190 -3.027 CCDC92 coiled-coil domain containing 92 12 -122986907 NM_025140 12q24.31 Hs.114111 5    
201567_s_at -0.411 10.036 -2.777 1.397e-02 0.190 -3.028 GOLGA4 golgi autoantigen, golgin subfamily a, 4 3 37259741 NM_002078 3p22-p21.3 Hs.344151 21

cytoplasm

Golgi apparatus

trans-Golgi network

membrane

vesicle-mediated transport

 
208620_at -0.402 9.978 -2.776 1.398e-02 0.190 -3.028 PCBP1 poly(rC) binding protein 1 2 70168088 U24223 2p13-p12 Hs.2853 42

nuclear mRNA splicing, via spliceosome

DNA binding

single-stranded DNA binding

RNA binding

protein binding

nucleus

cytoplasm

mRNA metabolic process

ribonucleoprotein complex

 
231908_at 0.277 4.401 2.775 1.400e-02 0.190 -3.030 ZDHHC18 zinc finger, DHHC-type containing 18 1 27025787 AL034380 1p36.11 Hs.523710 4

zinc ion binding

acyltransferase activity

membrane

integral to membrane

transferase activity

metal ion binding

 
216081_at 0.421 4.533 2.775 1.401e-02 0.190 -3.030 LAMA4 laminin, alpha 4 6 -112681678, -112535826 AK027151 6q21 Hs.654572 32

receptor binding

extracellular matrix structural constituent

extracellular region

basal lamina

laminin-1 complex

regulation of cell adhesion

regulation of cell migration

regulation of embryonic development

Focal adhesion

ECM-receptor interaction

Pathways in cancer

Small cell lung cancer

234702_x_at -0.275 2.142 -2.775 1.401e-02 0.190 -3.030 CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) 7 116907252 S64699 7q31.2 Hs.489786 Hs.621460 Hs.661104 750

nucleotide binding

ion channel activity

ATP-binding and phosphorylation-dependent chloride channel activity

channel-conductance-controlling ATPase activity

protein binding

ATP binding

cholesterol biosynthetic process

ion transport

respiratory gaseous exchange

membrane

integral to membrane

basolateral plasma membrane

apical plasma membrane

hydrolase activity

ATPase activity

PDZ domain binding

cholesterol transport

transepithelial chloride transport

lung development

cytoplasmic vesicle membrane

chloride ion binding

chloride channel complex

vasodilation

response to drug

response to peptide hormone stimulus

response to estrogen stimulus

ABC transporters

Vibrio cholerae infection

202118_s_at -0.432 4.715 -2.775 1.403e-02 0.190 -3.031 CPNE3 copine III 8 87595771 AA541758 8q21.3 Hs.191219 10

protein serine/threonine kinase activity

transporter activity

calcium-dependent phospholipid binding

cytoplasm

cytosol

lipid metabolic process

vesicle-mediated transport

 
203323_at 0.539 7.788 2.774 1.403e-02 0.190 -3.031 CAV2 caveolin 2 7 115926679 BF197655 7q31.1 Hs.212332 Hs.603096 50

negative regulation of endothelial cell proliferation

protein binding

intracellular

Golgi apparatus

plasma membrane

integral to plasma membrane

caveola

vesicle fusion

mitochondrion organization

endoplasmic reticulum organization

transport vesicle

protein homodimerization activity

vesicle docking

perinuclear region of cytoplasm

skeletal muscle fiber development

protein oligomerization

Focal adhesion

202273_at 0.312 6.809 2.774 1.403e-02 0.190 -3.031 PDGFRB platelet-derived growth factor receptor, beta polypeptide 5 -149473594 NM_002609 5q31-q32 Hs.509067 183

nucleotide binding

in utero embryonic development

kidney development

tissue homeostasis

receptor activity

platelet activating factor receptor activity

platelet-derived growth factor beta-receptor activity

vascular endothelial growth factor receptor activity

platelet-derived growth factor receptor binding

ATP binding

nitrogen compound metabolic process

signal transduction

positive regulation of cell proliferation

membrane

integral to membrane

transferase activity

positive regulation of cell migration

protein amino acid autophosphorylation

platelet-derived growth factor receptor signaling pathway

platelet-derived growth factor binding

skeletal system morphogenesis

smooth muscle tissue development

regulation of peptidyl-tyrosine phosphorylation

cell chemotaxis

MAPK signaling pathway

Calcium signaling pathway

Cytokine-cytokine receptor interaction

Focal adhesion

Gap junction

Regulation of actin cytoskeleton

Pathways in cancer

Colorectal cancer

Glioma

Prostate cancer

Melanoma

217856_at -0.504 5.399 -2.774 1.404e-02 0.190 -3.032 RBM8A RNA binding motif protein 8A 1 144218994 AF182415 1q12 Hs.356873 43

nucleotide binding

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

nuclear mRNA splicing, via spliceosome

mRNA binding

protein binding

nucleus

spliceosomal complex

cytoplasm

transport

biological_process

RNA splicing

nuclear speck

exon-exon junction complex

mRNA transport

 
1557399_at 0.293 4.098 2.774 1.405e-02 0.190 -3.033 LOC284009 hypothetical protein LOC284009 17 -2257024 AI678065 17p13.3 Hs.632244 2    
218010_x_at 0.484 5.704 2.774 1.405e-02 0.190 -3.033 PPDPF pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish) 20 61622576 NM_024299 20q13.33 Hs.79625 3

multicellular organismal development

cell differentiation

 
217835_x_at -0.433 11.038 -2.773 1.406e-02 0.190 -3.033 C20orf24 chromosome 20 open reading frame 24 20 34667580, 34667605 NM_018840 20q11.23 Hs.584985 7

molecular_function

protein binding

cellular_component

biological_process

 
217820_s_at -0.515 8.103 -2.773 1.406e-02 0.190 -3.034 ENAH enabled homolog (Drosophila) 1 -223741156 NM_018212 1q42.12 Hs.497893 37

actin binding

cytoplasm

cytoskeleton

focal adhesion

SH3 domain binding

lamellipodium

cell junction

filopodium

synapse

intracellular transport

WW domain binding

Regulation of actin cytoskeleton

201050_at 0.310 5.904 2.773 1.408e-02 0.190 -3.034 PLD3 phospholipase D family, member 3 19 45546171 NM_012268 19q13.2 Hs.257008 11

phospholipase D activity

endoplasmic reticulum

metabolic process

membrane

integral to membrane

lipid catabolic process

hydrolase activity

NAPE-specific phospholipase D activity

 
226092_at -0.444 8.160 -2.772 1.409e-02 0.190 -3.036 MPP5 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) 14 66777773 BF115203 14q23.3 Hs.652312 23

protein binding

nucleus

cytoplasm

plasma membrane

tight junction

cell junction

Tight junction

221376_at 0.289 5.608 2.772 1.409e-02 0.190 -3.036 FGF17 fibroblast growth factor 17 8 21956373 NM_003867 8p21 Hs.248192 17

extracellular region

extracellular region

extracellular space

signal transduction

cell-cell signaling

nervous system development

growth factor activity

positive regulation of cell proliferation

fibroblast growth factor receptor signaling pathway

fibroblast growth factor receptor signaling pathway

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

206322_at 0.247 3.628 2.772 1.410e-02 0.190 -3.036 SYN3 synapsin III 22 -31238539, -31238539 NM_003490 22q12.3 Hs.608750 18

nucleotide binding

catalytic activity

calcium ion binding

protein binding

ATP binding

neurotransmitter secretion

membrane

cell junction

synaptic vesicle membrane

cytoplasmic vesicle

synapse

 
202806_at 0.656 6.324 2.771 1.411e-02 0.190 -3.037 DBN1 drebrin 1 5 -176816219, -176816219 NM_004395 5q35.3 Hs.130316 32

actin binding

profilin binding

intracellular

cytoplasm

actin filament organization

multicellular organismal development

nervous system development

cell differentiation

dendrite

actomyosin

regulation of neuronal synaptic plasticity

regulation of dendrite development

 
226065_at 0.372 6.761 2.771 1.411e-02 0.190 -3.037 PRICKLE1 prickle homolog 1 (Drosophila) 12 -41138407, -41138407, -41138407 N98595 12q12 Hs.524348 Hs.639400 14

nucleus

cytoplasm

cytosol

zinc ion binding

membrane

nuclear membrane

metal ion binding

Wnt signaling pathway

206295_at -1.266 4.533 -2.771 1.412e-02 0.190 -3.037 IL18 interleukin 18 (interferon-gamma-inducing factor) 11 -111519185 NM_001562 11q22.2-q22.3 Hs.83077 389

angiogenesis

response to hypoxia

signal transducer activity

cytokine activity

interleukin-1 receptor binding

extracellular region

extracellular space

immune response

cell-cell signaling

response to cold

regulation of cell adhesion

sleep

chemokine biosynthetic process

T-helper 1 type immune response

T-helper 2 type immune response

interleukin-2 biosynthetic process

interferon-gamma biosynthetic process

positive regulation of activated T cell proliferation

interleukin-13 biosynthetic process

granulocyte macrophage colony-stimulating factor biosynthetic process

Cytokine-cytokine receptor interaction

223908_at -0.481 4.374 -2.771 1.412e-02 0.190 -3.037 HDAC8 histone deacetylase 8 X -71466090 AF212246 Xq13 Hs.310536 23

histone deacetylase complex

negative regulation of transcription from RNA polymerase II promoter

nuclear chromosome

histone deacetylase activity

nucleus

cytoplasm

chromatin assembly or disassembly

transcription factor binding

chromatin modification

histone deacetylation

hydrolase activity

regulation of transcription

 
222529_at -0.557 6.820 -2.771 1.412e-02 0.190 -3.037 SLC25A37 solute carrier family 25, member 37 8 23442307 BG251467 8p21.2 Hs.596025 Hs.658208 Hs.716436 11

binding

iron ion binding

mitochondrion

mitochondrial inner membrane

ion transport

iron ion transport

membrane

integral to membrane

 
1562074_a_at -0.278 3.995 -2.771 1.413e-02 0.190 -3.038 UNC13C unc-13 homolog C (C. elegans) 15 52092392 BC039494 15q21.3 Hs.657273 4

cytoplasm

plasma membrane

exocytosis

intracellular signaling cascade

synaptic transmission

zinc ion binding

diacylglycerol binding

cell junction

synapse

metal ion binding

 
244747_at 0.243 3.078 2.771 1.413e-02 0.190 -3.038 NPNT nephronectin 4 107036053 BF844056 4q24 Hs.518921 5

calcium ion binding

protein binding

extracellular region

proteinaceous extracellular matrix

cell adhesion

multicellular organismal development

membrane

cell differentiation

 
219929_s_at 0.329 6.247 2.771 1.414e-02 0.190 -3.038 ZFYVE21 zinc finger, FYVE domain containing 21 14 103251897 NM_024071 14q32.33 Hs.592322 4

zinc ion binding

metal ion binding

 
201898_s_at -0.270 8.762 -2.771 1.414e-02 0.190 -3.038 UBE2A ubiquitin-conjugating enzyme E2A (RAD6 homolog) X 118592526, 118598325 AI126625 Xq24-q25 Hs.379466 16

nucleotide binding

chromatin

ubiquitin-protein ligase activity

ATP binding

postreplication repair

ubiquitin-dependent protein catabolic process

response to DNA damage stimulus

positive regulation of cell proliferation

response to UV

ligase activity

ubiquitin protein ligase binding

histone H2A ubiquitination

post-translational protein modification

regulation of protein metabolic process

protein autoubiquitination

Ubiquitin mediated proteolysis

225959_s_at -0.591 8.177 -2.771 1.414e-02 0.190 -3.038 ZNRF1 zinc and ring finger 1 16 73590415 BF432625 16q23.1 Hs.427284 11

protein binding

lysosome

endosome

zinc ion binding

membrane

ligase activity

modification-dependent protein catabolic process

cell junction

cytoplasmic vesicle

synapse

metal ion binding

 
203879_at 0.285 5.436 2.771 1.414e-02 0.190 -3.039 PIK3CD phosphoinositide-3-kinase, catalytic, delta polypeptide 1 9634376 U86453 1p36.2 Hs.518451 40

nucleotide binding

inositol or phosphatidylinositol kinase activity

protein binding

ATP binding

phosphoinositide 3-kinase complex

protein amino acid phosphorylation

signal transduction

1-phosphatidylinositol-3-kinase activity

transferase activity

phosphotransferase activity, alcohol group as acceptor

phosphoinositide phosphorylation

phosphatidylinositol-4,5-bisphosphate 3-kinase activity

phosphoinositide-mediated signaling

Inositol phosphate metabolism

ErbB signaling pathway

Chemokine signaling pathway

Phosphatidylinositol signaling system

mTOR signaling pathway

Apoptosis

VEGF signaling pathway

Focal adhesion

Toll-like receptor signaling pathway

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Insulin signaling pathway

Type II diabetes mellitus

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Chronic myeloid leukemia

Acute myeloid leukemia

Small cell lung cancer

Non-small cell lung cancer

200597_at -0.384 7.237 -2.770 1.415e-02 0.190 -3.039 EIF3A eukaryotic translation initiation factor 3, subunit A 10 -120784530 AI123320 10q26 Hs.523299 38

formation of translation initiation complex

translation initiation factor activity

translation initiation factor activity

structural molecule activity

protein binding

nucleus

cytoplasm

cytosol

eukaryotic translation initiation factor 3 complex

 
205569_at 0.549 4.122 2.770 1.415e-02 0.190 -3.039 LAMP3 lysosomal-associated membrane protein 3 3 -184322696 NM_014398 3q26.3-q27 Hs.518448 13

lysosomal membrane

cell proliferation

membrane

integral to membrane

Lysosome

221776_s_at -0.460 6.451 -2.770 1.416e-02 0.190 -3.040 BRD7 bromodomain containing 7 16 -48910441 AI885109 16q12 Hs.437894 22

nucleus

cytoplasm

regulation of transcription from RNA polymerase II promoter

transcription factor binding

Wnt receptor signaling pathway

histone binding

 
223400_s_at -0.552 3.704 -2.770 1.416e-02 0.190 -3.040 PBRM1 polybromo 1 3 -52554407, -52554407 AF197569 3p21 Hs.189920 19

nuclear chromosome

DNA binding

chromatin binding

protein binding

nucleus

chromatin remodeling

mitosis

regulation of transcription

 
201628_s_at -0.294 9.819 -2.768 1.421e-02 0.191 -3.043 RRAGA Ras-related GTP binding A 9 19039371 NM_006570 9p22.1 Hs.432330 10

nucleotide binding

GTP binding

nucleus

cytoplasm

Golgi apparatus

apoptosis

cell death

virus-host interaction

protein homodimerization activity

interspecies interaction between organisms

positive regulation of cytolysis

protein heterodimerization activity

phosphoprotein binding

 
221020_s_at -0.334 6.232 -2.768 1.422e-02 0.191 -3.043 SLC25A32 solute carrier family 25, member 32 8 -104480042 NM_030780 8q22.3 Hs.607819 6

transporter activity

binding

mitochondrion

mitochondrial inner membrane

transport

folic acid transporter activity

folic acid transport

membrane

integral to membrane

 
224445_s_at 0.262 7.772 2.767 1.423e-02 0.191 -3.044 ZFYVE21 zinc finger, FYVE domain containing 21 14 103251897 BC005999 14q32.33 Hs.592322 4

zinc ion binding

metal ion binding

 
210189_at -0.311 6.276 -2.767 1.424e-02 0.191 -3.045 HSPA1L heat shock 70kDa protein 1-like 6 -31885374, -3223483, -3024990 D85730 6p21.3 Hs.690634 62

nucleotide binding

ATP binding

response to unfolded protein

MAPK signaling pathway

Endocytosis

Antigen processing and presentation

244499_at 0.232 5.446 2.767 1.425e-02 0.191 -3.045 ZFC3H1 zinc finger, C3H1-type containing 12 -70289648 AI015547 12q21.1 Hs.527874 4

binding

intracellular

RNA processing

zinc ion binding

metal ion binding

 
227127_at -0.285 6.114 -2.767 1.425e-02 0.191 -3.046 TMEM110 transmembrane protein 110 3 -52848937 BF222855 3p21.1 Hs.705605 2

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
218569_s_at -0.407 5.940 -2.766 1.426e-02 0.191 -3.046 KBTBD4 kelch repeat and BTB (POZ) domain containing 4 11 -47550325, -47550325 NM_018095 11p11.2 Hs.656205 Hs.718483 6

protein binding

 
207125_at 0.229 2.535 2.766 1.427e-02 0.191 -3.047 ZNF225 zinc finger protein 225 19 49309387 NM_013362 19q13.2 Hs.279567 8

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
204247_s_at 0.298 6.258 2.766 1.427e-02 0.191 -3.047 CDK5 cyclin-dependent kinase 5 7 -150381831 NM_004935 7q36 Hs.647078 132

nucleotide binding

neuron migration

synaptic transmission, dopaminergic

p53 binding

cyclin-dependent protein kinase activity

ErbB-2 class receptor binding

ATP binding

nucleus

cytoplasm

cytosol

protein amino acid phosphorylation

intracellular protein transport

cell-matrix adhesion

axonogenesis

skeletal muscle tissue development

motor axon guidance

cell proliferation

associative learning

visual learning

embryonic development

Schwann cell development

membrane

transferase activity

sensory perception of pain

cerebellar cortex development

cerebellar cortex formation

hippocampus development

layer formation in the cerebral cortex

central nervous system neuron development

cerebral cortex development

corpus callosum development

lamellipodium

filopodium

neuron differentiation

regulation of cell migration

axon

dendrite

growth cone

acetylcholine receptor activator activity

neuron projection development

negative regulation of protein ubiquitination

neuromuscular junction

negative regulation of synaptic plasticity

receptor catabolic process

serine phosphorylation of STAT3 protein

synaptic transmission, glutamatergic

cell soma

receptor clustering

ErbB-3 class receptor binding

positive regulation of neuron apoptosis

negative regulation of cell cycle

positive regulation of protein kinase activity

positive regulation of calcium ion-dependent exocytosis

negative regulation of protein export from nucleus

behavioral response to cocaine

dendrite morphogenesis

tau-protein kinase activity

cell division

regulation of excitatory postsynaptic membrane potential

Axon guidance

Alzheimer's disease

1559114_a_at 0.194 3.878 2.766 1.427e-02 0.191 -3.047 CXCR7 chemokine (C-X-C motif) receptor 7 2 237143118 BC038720 2q37.3 Hs.471751 21

receptor activity

G-protein coupled receptor activity

protein binding

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

biological_process

integral to membrane

interspecies interaction between organisms

 
227075_at -0.494 7.325 -2.765 1.429e-02 0.191 -3.048 ELP3 elongation protein 3 homolog (S. cerevisiae) 8 28006502 AI949204 8p21.1 Hs.491336 22

DNA binding

histone acetyltransferase activity

iron ion binding

protein binding

nucleus

nucleolus

cytoplasm

regulation of transcription from RNA polymerase II promoter

transcription elongation factor complex

N-acetyltransferase activity

metabolic process

acyltransferase activity

phosphorylase kinase regulator activity

DNA-directed RNA polymerase II, holoenzyme

transferase activity

RNA polymerase II transcription elongation factor activity

regulation of transcription

metal ion binding

iron-sulfur cluster binding

 
208030_s_at -0.287 9.705 -2.765 1.430e-02 0.191 -3.049 ADD1 adducin 1 (alpha) 4 2815381 NM_001119 4p16.3 Hs.183706 Hs.701490 139

calmodulin binding

nucleus

cytoplasm

cytosol

cytoskeleton

plasma membrane

transcription factor binding

F-actin capping protein complex

actin cytoskeleton organization

spectrin binding

positive regulation of protein binding

protein homodimerization activity

metal ion binding

protein heterodimerization activity

actin filament binding

barbed-end actin filament capping

actin filament bundle formation

 
216197_at 0.280 4.660 2.764 1.432e-02 0.191 -3.050 ATF7IP activating transcription factor 7 interacting protein 12 14409877 AK021569 12p13.1 Hs.714407 17

negative regulation of transcription from RNA polymerase II promoter

transcription corepressor activity

protein binding

nucleus

transcription factor complex

cytoplasm

DNA methylation

ATPase activity

interspecies interaction between organisms

regulation of transcription

positive regulation of transcription, DNA-dependent

regulation of transcriptional preinitiation complex assembly

 
216189_at 0.441 3.041 2.763 1.435e-02 0.192 -3.052 LOC100289109 hypothetical protein LOC100289109 5   BC002465 5q14.1 Hs.406869      
223200_s_at -0.510 6.350 -2.763 1.436e-02 0.192 -3.052 LSG1 large subunit GTPase 1 homolog (S. cerevisiae) 3 -195842806 AI219740 3q29 Hs.518505 12

nucleotide binding

GTP binding

intracellular

nucleus

cytoplasm

endoplasmic reticulum

Cajal body

protein transport

hydrolase activity

nuclear export

 
234284_at 0.218 3.864 2.763 1.436e-02 0.192 -3.052 GNG8 guanine nucleotide binding protein (G protein), gamma 8 19 -51829172 AF188179 19q13.2-q13.3 Hs.283961 5

GTPase activity

signal transducer activity

extracellular region

heterotrimeric G-protein complex

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

hormone-mediated signaling

Chemokine signaling pathway

213361_at 0.325 5.305 2.763 1.436e-02 0.192 -3.052 TDRD7 tudor domain containing 7 9 99214122 AW129593 9q22.33 Hs.193842 8

nucleic acid binding

cytoplasm

mitochondrial matrix

germ cell development

ribonucleoprotein complex

P granule

protein N-terminus binding

 
209141_at -0.623 9.966 -2.763 1.436e-02 0.192 -3.053 UBE2G1 ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast) 17 -4119260 AW299555 17p13.2 1q42 Hs.714345 12

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ubiquitin-dependent protein catabolic process

ligase activity

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

Parkinson's disease

216892_at 0.233 5.147 2.762 1.438e-02 0.192 -3.054 IGHG1 immunoglobulin heavy constant gamma 1 (G1m marker) 14   S65761 14q32.33 Hs.510635 29

antigen binding

protein binding

extracellular region

membrane fraction

immune response

 
218239_s_at -0.535 7.457 -2.762 1.438e-02 0.192 -3.054 GTPBP4 GTP binding protein 4 10 1024348 NM_012341 10p15-p14 Hs.215766 10

regulation of cyclin-dependent protein kinase activity

nucleotide binding

GTPase activity

protein binding

GTP binding

nucleus

nucleolus

cytoplasm

negative regulation of DNA replication

negative regulation of cell proliferation

negative regulation of cell-cell adhesion

negative regulation of cell migration

negative regulation of protein ubiquitination

negative regulation of collagen binding

ribosome biogenesis

perinuclear region of cytoplasm

protein stabilization

 
213198_at -0.242 8.138 -2.762 1.439e-02 0.192 -3.054 ACVR1B activin A receptor, type IB 12 50631752, 50631752, 50631752 AL117643 12q13 Hs.438918 39

G1/S transition of mitotic cell cycle

nucleotide binding

magnesium ion binding

in utero embryonic development

hair follicle development

protein serine/threonine kinase activity

receptor activity

ATP binding

integral to plasma membrane

induction of apoptosis

signal transduction

transmembrane receptor protein serine/threonine kinase signaling pathway

embryonic development

cell surface

membrane

activin receptor activity, type I

transferase activity

peptidyl-threonine phosphorylation

growth factor binding

manganese ion binding

negative regulation of cell growth

ubiquitin protein ligase binding

positive regulation of activin receptor signaling pathway

regulation of transcription

positive regulation of erythrocyte differentiation

SMAD binding

protein amino acid autophosphorylation

activin binding

MAPK signaling pathway

Cytokine-cytokine receptor interaction

Endocytosis

TGF-beta signaling pathway

Adherens junction

Pathways in cancer

Colorectal cancer

Pancreatic cancer

Chronic myeloid leukemia

221516_s_at 0.230 7.080 2.762 1.439e-02 0.192 -3.054 SMCR7L Smith-Magenis syndrome chromosome region, candidate 7-like 22 38228229 BC002587 22q13 Hs.718449 11

mitochondrion

membrane

integral to membrane

 
219171_s_at -0.348 4.011 -2.762 1.439e-02 0.192 -3.055 ZNF236 zinc finger protein 236 18 72665103 NM_007345 18q22-q23 Hs.719137 5

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
225835_at -1.061 7.477 -2.762 1.440e-02 0.192 -3.055 SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporters), member 2 5 127447381 AK025062 5q23.3 Hs.162585 Hs.712970 29

transporter activity

membrane fraction

integral to plasma membrane

ion transport

potassium ion transport

sodium ion transport

sodium:potassium:chloride symporter activity

symporter activity

membrane

transepithelial chloride transport

potassium ion binding

sodium ion binding

ammonia transporter activity

transepithelial ammonium transport

Vibrio cholerae infection

215040_at 0.330 6.661 2.762 1.440e-02 0.192 -3.055 RNASEH2B ribonuclease H2, subunit B 13 50381892, 50381892 AL049218 13q14.3 Hs.306291 13

nucleus

DNA replication

208735_s_at -0.489 7.072 -2.761 1.441e-02 0.192 -3.056 CTDSP2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 12 -56499976 AF022231 12q13-q15 Hs.524530 11

phosphoprotein phosphatase activity

soluble fraction

nucleus

hydrolase activity

 
201514_s_at -0.613 6.900 -2.761 1.442e-02 0.192 -3.056 G3BP1 GTPase activating protein (SH3 domain) binding protein 1 5 151131668 NM_005754 5q33.1 Hs.587054 27

nucleotide binding

DNA binding

RNA binding

ATP-dependent DNA helicase activity

ATP-dependent RNA helicase activity

helicase activity

endonuclease activity

protein binding

ATP binding

intracellular

nucleus

cytoplasm

cytosol

plasma membrane

transport

Ras protein signal transduction

hydrolase activity

 
211984_at -0.373 10.402 -2.760 1.443e-02 0.192 -3.057 CALM1 calmodulin 1 (phosphorylase kinase, delta) 14 89933125 AI653730 14q24-q31 Hs.282410 Hs.708270 181  

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Glioma

219299_at -0.369 6.364 -2.760 1.444e-02 0.192 -3.057 TRMT12 tRNA methyltransferase 12 homolog (S. cerevisiae) 8 125532228 NM_017956 8q24.13 Hs.9925 9

tRNA processing

methyltransferase activity

transferase activity

 
222576_s_at 0.210 5.392 2.760 1.444e-02 0.192 -3.057 EIF2C1 eukaryotic translation initiation factor 2C, 1 1 36121396 AW071829 1p35-p34 Hs.22867 26

cytoplasmic mRNA processing body

nuclear-transcribed mRNA catabolic process

RNA binding

protein binding

cytoplasm

regulation of translation

gene silencing by RNA

gene silencing by miRNA, negative regulation of translation

regulation of transcription

 
204219_s_at -0.269 10.248 -2.760 1.445e-02 0.192 -3.058 PSMC1 proteasome (prosome, macropain) 26S subunit, ATPase, 1 14 89792646 NM_002802 14q32.11 Hs.356654 51

nucleotide binding

proteasome complex

protein binding

ATP binding

nucleus

nucleolus

cytoplasm

cytosol

hydrolase activity

ATPase activity

protein catabolic process

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

209651_at 0.480 6.944 2.759 1.446e-02 0.192 -3.059 TGFB1I1 transforming growth factor beta 1 induced transcript 1 16 31390984, 31392026 BC001830 16p11.2 Hs.513530 51

transcription coactivator activity

transcription coactivator activity

protein binding

intracellular

nucleus

cytoplasm

cytoskeleton

focal adhesion

transcription from RNA polymerase II promoter

cell adhesion

zinc ion binding

negative regulation of cell proliferation

positive regulation of epithelial to mesenchymal transition

Wnt receptor signaling pathway

nuclear matrix

cell junction

cell differentiation

positive regulation of transforming growth factor beta receptor signaling pathway

negative regulation of transforming growth factor beta receptor signaling pathway

androgen receptor signaling pathway

ubiquitin-dependent SMAD protein catabolic process

positive regulation of transcription, DNA-dependent

metal ion binding

androgen receptor binding

androgen receptor binding

I-SMAD binding

 
225644_at -0.693 7.384 -2.759 1.447e-02 0.192 -3.059 CCDC117 coiled-coil domain containing 117 22 27498661 BF060776 22q12.1 Hs.406460 6    
218583_s_at -0.315 8.112 -2.759 1.447e-02 0.192 -3.060 DCUN1D1 DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) 3 -184143252 NM_020640 3q26.3 Hs.715661 16

molecular_function

cellular_component

biological_process

modification-dependent protein catabolic process

 
218195_at -0.454 7.133 -2.759 1.447e-02 0.192 -3.060 C6orf211 chromosome 6 open reading frame 211 6 151815114 NM_024573 6q25.1 Hs.15929 7

protein binding

 
225258_at 0.363 6.066 2.759 1.447e-02 0.192 -3.060 FBLIM1 filamin binding LIM protein 1 1 15957841, 15963580, 15964045 AL133035 1p36.21 Hs.530101 16

protein binding

cytoplasm

cytoskeleton

focal adhesion

cell cortex

cell adhesion

zinc ion binding

regulation of cell shape

cell junction

metal ion binding

 
217904_s_at 0.282 5.796 2.759 1.448e-02 0.192 -3.060 BACE1 beta-site APP-cleaving enzyme 1 11 -116661624 NM_012104 11q23.2-q23.3 Hs.504003 160

aspartic-type endopeptidase activity

endosome

Golgi apparatus

integral to plasma membrane

proteolysis

membrane protein ectodomain proteolysis

peptidase activity

beta-aspartyl-peptidase activity

membrane

beta-amyloid metabolic process

Alzheimer's disease

200816_s_at -0.237 9.168 -2.759 1.448e-02 0.192 -3.060 PAFAH1B1 platelet-activating factor acetylhydrolase, isoform Ib, subunit 1 (45kDa) 17 2443672 NM_000430 17p13.3 Hs.77318 75

establishment of mitotic spindle orientation

astral microtubule

kinetochore

acrosome assembly

neuron migration

nucleus

cytoplasm

centrosome

spindle

cytosol

microtubule

microtubule associated complex

cell cortex

transport

cell cycle

mitosis

synaptic transmission

multicellular organismal development

nervous system development

neuroblast proliferation

learning or memory

microtubule binding

retrograde axon cargo transport

heparin binding

adult locomotory behavior

membrane

lipid catabolic process

corpus callosum morphogenesis

hippocampus development

layer formation in the cerebral cortex

cerebral cortex development

actin cytoskeleton organization

cell differentiation

microtubule organizing center organization

cell leading edge

motile primary cilium

nonmotile primary cilium

nuclear membrane

regulation of Rho GTPase activity

dynactin binding

protein homodimerization activity

phospholipase binding

dynein binding

platelet activating factor metabolic process

vesicle transport along microtubule

perinuclear region of cytoplasm

brain morphogenesis

neuromuscular process controlling balance

phosphoprotein binding

cell division

Ether lipid metabolism

Metabolic pathways

228435_at -0.862 7.657 -2.758 1.450e-02 0.192 -3.061 FEM1A fem-1 homolog a (C. elegans) 19 4742727 AL530854 19p13.3 Hs.515082 9

ubiquitin-protein ligase activity

cytoplasm

modification-dependent protein catabolic process

regulation of ubiquitin-protein ligase activity

 
225684_at 0.423 7.020 2.758 1.450e-02 0.192 -3.061 SKA2 spindle and kinetochore associated complex subunit 2 17 -54542089 BG496998 17q22 Hs.463607 7

mitotic anaphase

outer kinetochore of condensed chromosome

protein binding

spindle microtubule

cell cycle

chromosome segregation

microtubule binding

regulation of microtubule polymerization or depolymerization

cell division

 
243643_x_at -0.240 5.274 -2.758 1.451e-02 0.192 -3.062 SLC30A6 solute carrier family 30 (zinc transporter), member 6 2 32244436 AI623693 2p22.3 Hs.23248 7

Golgi apparatus

cation transport

zinc ion transport

zinc ion binding

cation transmembrane transporter activity

membrane

integral to membrane

 
224843_at -0.304 4.779 -2.757 1.452e-02 0.192 -3.063 SLAIN2 SLAIN motif family, member 2 4 48038369 AB040891 4p11 Hs.479677 5    
201177_s_at -0.334 9.547 -2.757 1.452e-02 0.192 -3.063 UBA2 ubiquitin-like modifier activating enzyme 2 19 39611107 NM_005499 19q12 Hs.631580 23

nucleotide binding

ATP binding

nucleus

protein modification process

enzyme activator activity

transcription factor binding

small protein activating enzyme activity

ligase activity

modification-dependent protein catabolic process

Ubiquitin mediated proteolysis

1554274_a_at -0.377 5.394 -2.757 1.452e-02 0.192 -3.063 SSH1 slingshot homolog 1 (Drosophila) 12 -107709824, -107709824, -107700595 AB072356 12q24.11 Hs.199763 23

cell morphogenesis

actin binding

protein tyrosine phosphatase activity

protein binding

cytoplasm

cytoskeleton

plasma membrane

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

lamellipodium

actin cytoskeleton organization

Regulation of actin cytoskeleton

208777_s_at -0.282 8.974 -2.757 1.452e-02 0.192 -3.063 PSMD11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 17 27795614 AF001212 17q11.2 Hs.655396 41

proteasome complex

protein binding

cytosol

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

226860_at -0.434 7.564 -2.757 1.453e-02 0.192 -3.063 TMEM19 transmembrane protein 19 12 70366144 AW572609 12q21.1 Hs.688627 4

membrane

integral to membrane

 
220185_at 0.301 5.760 2.757 1.454e-02 0.192 -3.064 SPTBN4 spectrin, beta, non-erythrocytic 4 19 45664965, 45728234 NM_025213 19q13.13 Hs.32706 11

actin binding

structural constituent of cytoskeleton

protein binding

cytoplasm

cytoskeleton

cell cortex

cytoskeletal anchoring at plasma membrane

axonogenesis

sensory perception of sound

adult walking behavior

spectrin

fertilization

vesicle-mediated transport

nuclear matrix

PML body

transmission of nerve impulse

axon

ankyrin binding

adult behavior

positive regulation of multicellular organism growth

axon hillock

actin filament capping

 
223404_s_at -0.401 7.473 -2.757 1.455e-02 0.192 -3.064 C1orf25 chromosome 1 open reading frame 25 1 -183353840 AW512122 1q25.2 Hs.107149 6

RNA binding

tRNA (guanine-N2-)-methyltransferase activity

intracellular

behavior

tRNA processing

zinc ion binding

metal ion binding

 
214321_at 1.237 5.360 2.756 1.456e-02 0.192 -3.065 NOV nephroblastoma overexpressed gene 8 120497732 BF440025 8q24.1 Hs.235935 40

regulation of cell growth

insulin-like growth factor binding

extracellular region

growth factor activity

 
230121_at 0.253 3.377 2.756 1.457e-02 0.193 -3.066 C1orf133 chromosome 1 open reading frame 133 1 -208471426 BF508679 1q32.2 Hs.446946 2    
218998_at -0.340 7.265 -2.756 1.457e-02 0.193 -3.066 C9orf6 chromosome 9 open reading frame 6 9 110736493 NM_017832 9q31.3 Hs.29276 2    
215121_x_at 0.591 5.938 2.756 1.458e-02 0.193 -3.066 IGL@ immunoglobulin lambda locus 22   AA680302 22q11.1-q11.2 Hs.449585 Hs.561078 20    
203605_at -0.343 7.496 -2.755 1.459e-02 0.193 -3.067 SRP54 signal recognition particle 54kDa 14 34521854 NM_003136 14q13.2 Hs.167535 15

nucleotide binding

GTPase activity

protein binding

GTP binding

nucleus

nucleolus

cytoplasm

signal recognition particle, endoplasmic reticulum targeting

SRP-dependent cotranslational protein targeting to membrane, translocation

SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition

drug binding

7S RNA binding

nuclear speck

GDP binding

endoplasmic reticulum signal peptide binding

response to drug

ribonucleoprotein binding

Protein export

202696_at -0.298 8.252 -2.755 1.459e-02 0.193 -3.067 OXSR1 oxidative-stress responsive 1 3 38182029 NM_005109 3p22-p21.3 Hs.475970 21

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

response to oxidative stress

protein kinase cascade

transferase activity

identical protein binding

 
209252_at -0.298 7.765 -2.755 1.459e-02 0.193 -3.067 HARS2 histidyl-tRNA synthetase 2, mitochondrial (putative) 5 140051201 U18937 5q31.3 Hs.432560 8

nucleotide binding

histidine-tRNA ligase activity

ATP binding

cytoplasm

mitochondrion

mitochondrial matrix

histidyl-tRNA aminoacylation

ligase activity

Aminoacyl-tRNA biosynthesis

221854_at 0.362 5.846 2.755 1.460e-02 0.193 -3.067 PKP1 plakophilin 1 (ectodermal dysplasia/skin fragility syndrome) 1 199519202 AI378979 1q32 Hs.497350 26

signal transducer activity

protein binding

nucleus

intermediate filament

cell adhesion

signal transduction

multicellular organismal development

intermediate filament binding

cell junction

desmosome

structural constituent of epidermis

 
226099_at -0.430 4.569 -2.755 1.460e-02 0.193 -3.068 ELL2 elongation factor, RNA polymerase II, 2 5 -95246557 AI924426 5q15 Hs.192221 Hs.708710 6

RNA polymerase II transcription factor activity

nucleus

RNA elongation from RNA polymerase II promoter

transcription elongation factor complex

RNA polymerase II transcription elongation factor activity

regulation of transcription

 
236845_at 0.311 6.102 2.755 1.460e-02 0.193 -3.068 TRIM62 tripartite motif-containing 62 1 -33383590 AI479391 1p35.1 Hs.656006 8

protein binding

intracellular

zinc ion binding

metal ion binding

 
212930_at -0.516 6.527 -2.754 1.461e-02 0.193 -3.068 ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 12 -88505956 AW576457 12q21.3 Hs.506276 38

nucleotide binding

magnesium ion binding

calcium-transporting ATPase activity

calcium ion binding

calmodulin binding

ATP binding

plasma membrane

integral to plasma membrane

ATP biosynthetic process

cation transport

calcium ion transport

metabolic process

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

Calcium signaling pathway

212012_at 0.451 7.015 2.754 1.462e-02 0.193 -3.069 PXDN peroxidasin homolog (Drosophila) 2 -1614665 BF342851 2p25 Hs.332197 9

peroxidase activity

interleukin-1 receptor antagonist activity

calcium ion binding

protein binding

extracellular region

immune response

response to oxidative stress

oxidoreductase activity

heme binding

hydrogen peroxide catabolic process

oxidation reduction

 
223371_s_at 0.272 5.362 2.754 1.462e-02 0.193 -3.069 DNAJC4 DnaJ (Hsp40) homolog, subfamily C, member 4 11 63754328 BF116164 11q13 Hs.172847 4

membrane fraction

protein folding

response to unfolded protein

membrane

integral to membrane

heat shock protein binding

unfolded protein binding

 
230661_at 0.209 3.557 2.754 1.463e-02 0.193 -3.069 C8orf84 chromosome 8 open reading frame 84 8 -74139333 AW451999 8q21.11 Hs.439040 3

scavenger receptor activity

extracellular region

immune response

polysaccharide binding

 
208361_s_at -0.251 6.380 -2.754 1.463e-02 0.193 -3.069 POLR3D polymerase (RNA) III (DNA directed) polypeptide D, 44kDa 8 22158563 NM_001722 8q21 Hs.148342 10

DNA binding

DNA-directed RNA polymerase activity

nucleus

DNA-directed RNA polymerase III complex

transcription

transcription from RNA polymerase III promoter

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

238489_at -0.536 8.692 -2.754 1.463e-02 0.193 -3.070 PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit 1 56883577 BF575153 1p31 Hs.437039 67

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

nucleoplasm

cytosol

protein amino acid phosphorylation

fatty acid biosynthetic process

cholesterol biosynthetic process

signal transduction

transferase activity

regulation of fatty acid oxidation

Regulation of autophagy

mTOR signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

Hypertrophic cardiomyopathy (HCM)

222523_at -0.382 6.924 -2.753 1.465e-02 0.193 -3.071 SENP2 SUMO1/sentrin/SMT3 specific peptidase 2 3 186786724 BE622841 3q27.2 Hs.401388 14

protein binding

nucleus

nuclear pore

cytoplasm

proteolysis

peptidase activity

cysteine-type peptidase activity

protein transport

membrane

protein desumoylation

SUMO-specific protease activity

modification-dependent protein catabolic process

regulation of Wnt receptor signaling pathway

mRNA transport

intracellular protein transmembrane transport

Wnt signaling pathway

204605_at -0.359 7.241 -2.753 1.466e-02 0.193 -3.071 CGRRF1 cell growth regulator with ring finger domain 1 14 54046336 NM_006568 14q22.2 Hs.59106 5

protein binding

response to stress

cell cycle

cell cycle arrest

zinc ion binding

negative regulation of cell proliferation

negative regulation of cell growth

metal ion binding

 
209078_s_at 0.301 9.081 2.752 1.467e-02 0.193 -3.072 TXN2 thioredoxin 2 22 -35193038 AF276920 22q13.1 Hs.211929 19

nucleolus

cytoplasm

mitochondrion

glycerol ether metabolic process

transport

electron carrier activity

protein disulfide oxidoreductase activity

electron transport chain

cell redox homeostasis

 
219220_x_at 0.319 9.069 2.752 1.467e-02 0.193 -3.072 MRPS22 mitochondrial ribosomal protein S22 3 140545550 NM_020191 3q23 Hs.75724 13

molecular_function

structural constituent of ribosome

protein binding

mitochondrion

mitochondrial small ribosomal subunit

ribosome

biological_process

 
229298_at -0.490 5.791 -2.752 1.468e-02 0.193 -3.072 KBTBD7 kelch repeat and BTB (POZ) domain containing 7 13 -40663710 BF436101 13q14.11 Hs.63841 9

molecular_function

protein binding

cellular_component

biological_process

 
204143_s_at -0.761 6.074 -2.752 1.468e-02 0.193 -3.072 ENOSF1 enolase superfamily member 1 18 -663860, -663860, -662543 NM_017512 18p11.32 Hs.369762 Hs.658550 12

magnesium ion binding

cellular_component

mitochondrion

metabolic process

cellular amino acid catabolic process

isomerase activity

 
206742_at -0.752 6.835 -2.752 1.468e-02 0.193 -3.073 FIGF c-fos induced growth factor (vascular endothelial growth factor D) X -15273638 NM_004469 Xp22.31 Hs.11392 50

angiogenesis

platelet-derived growth factor receptor binding

extracellular region

extracellular region

extracellular space

multicellular organismal development

growth factor activity

positive regulation of cell proliferation

membrane

cell differentiation

platelet alpha granule lumen

protein homodimerization activity

vascular endothelial growth factor receptor 3 binding

vascular endothelial growth factor receptor signaling pathway

Cytokine-cytokine receptor interaction

mTOR signaling pathway

Focal adhesion

Pathways in cancer

Renal cell carcinoma

Pancreatic cancer

Bladder cancer

201664_at -0.700 6.309 -2.752 1.468e-02 0.193 -3.073 SMC4 structural maintenance of chromosomes 4 3 161600123, 161601040 AL136877 3q26.1 Hs.58992 14

nucleotide binding

condensin complex

condensin complex

protein binding

ATP binding

nucleus

chromosome

cytoplasm

cell cycle

mitotic chromosome condensation

protein heterodimerization activity

cell division

 
201516_at 0.368 8.265 2.752 1.469e-02 0.193 -3.073 SRM spermidine synthase 1 -11037235 NM_003132 1p36-p22 Hs.76244 12

spermidine synthase activity

spermidine biosynthetic process

transferase activity

Cysteine and methionine metabolism

Arginine and proline metabolism

beta-Alanine metabolism

Glutathione metabolism

Metabolic pathways

228020_at 0.237 7.485 2.751 1.470e-02 0.193 -3.074 PTCD3 Pentatricopeptide repeat domain 3 2 86186815 BG055431 2p11.2 Hs.323489 Hs.623885 9

protein binding

mitochondrion

 
221923_s_at 0.588 6.823 2.751 1.470e-02 0.193 -3.074 NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 5 170747402, 170747402 AA191576 5q35 Hs.557550 223

transcription coactivator activity

RNA binding

nucleus

nucleoplasm

nucleolus

cytoplasm

nucleosome assembly

intracellular protein transport

nucleocytoplasmic transport

nucleocytoplasmic transport

anti-apoptosis

response to stress

centrosome cycle

signal transduction

cell aging

protein localization

negative regulation of cell proliferation

negative regulation of centrosome duplication

ribonucleoprotein complex

Tat protein binding

spindle pole centrosome

ribosome assembly

histone binding

protein homodimerization activity

ribosomal large subunit binding

ribosomal small subunit binding

interspecies interaction between organisms

protein heterodimerization activity

NF-kappaB binding

unfolded protein binding

positive regulation of NF-kappaB transcription factor activity

protein oligomerization

 
239042_at -0.335 6.899 -2.751 1.471e-02 0.193 -3.075 TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) 17 -2172731 AI282511 17p13.3 Hs.388170 5

protein binding

nucleus

nucleolus

ribosome assembly

 
242864_at 0.269 5.524 2.751 1.472e-02 0.193 -3.075 ZNF554 zinc finger protein 554 19 2770871 AI924872 19p13.3 Hs.307043 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1553727_at 0.281 6.414 2.750 1.474e-02 0.193 -3.076 B4GALNT3 beta-1,4-N-acetyl-galactosaminyl transferase 3 12 439803 NM_173593 12p13.33 Hs.504416 6

Golgi apparatus

membrane

integral to membrane

transferase activity

Golgi cisterna membrane

N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase activity

 
210932_s_at -0.398 4.046 -2.749 1.477e-02 0.194 -3.078 RNF6 ring finger protein (C3H2C3 type) 6 13 -25684904, -25684904, -25684904 AF293342 13q12.2 Hs.136885 7

protein binding

cellular_component

biological_process

zinc ion binding

metal ion binding

 
222936_s_at -0.255 2.867 -2.749 1.478e-02 0.194 -3.079 PPPDE1 PPPDE peptidase domain containing 1 1 242882974 AF151904 1q44 Hs.498317 5    
200802_at 0.610 8.876 2.749 1.478e-02 0.194 -3.079 SARS seryl-tRNA synthetase 1 109558062 NM_006513 1p13.3-p13.1 Hs.531176 14

nucleotide binding

RNA binding

serine-tRNA ligase activity

protein binding

ATP binding

cytoplasm

seryl-tRNA aminoacylation

tRNA processing

ligase activity

Aminoacyl-tRNA biosynthesis

212231_at -0.348 7.872 -2.748 1.478e-02 0.194 -3.079 FBXO21 F-box protein 21 12 -116065967 AB020682 12q24.22 Hs.719089 7

ubiquitin ligase complex

ubiquitin-protein ligase activity

ubiquitin-dependent protein catabolic process

 
219829_at 0.405 8.831 2.748 1.479e-02 0.194 -3.079 ITGB1BP2 integrin beta 1 binding protein (melusin) 2 X 70438352 NM_012278 Xq12-q13.1 Hs.109999 5

calcium ion binding

protein binding

signal transduction

muscle organ development

zinc ion binding

SH3 domain binding

Z disc

 
222619_at -0.443 6.840 -2.748 1.481e-02 0.194 -3.081 ZNF281 zinc finger protein 281 1 -198642042 AU150752 1q32.1 Hs.59757 5

negative regulation of transcription from RNA polymerase II promoter

DNA binding

specific RNA polymerase II transcription factor activity

intracellular

nucleus

DNA-directed RNA polymerase II, core complex

zinc ion binding

regulation of transcription

metal ion binding

 
222731_at -0.502 8.411 -2.747 1.482e-02 0.194 -3.081 ZDHHC2 zinc finger, DHHC-type containing 2 8 17058206 AK001608 8p21.3-p22 Hs.443852 8

zinc ion binding

membrane

integral to membrane

palmitoyltransferase activity

transferase activity

protein palmitoylation

metal ion binding

 
239025_at 0.360 4.658 2.747 1.482e-02 0.194 -3.081 MGC21881 hypothetical locus MGC21881 9 -41942398, 66293050 N71863 9q21.11 Hs.380240 Hs.459704 3    
221539_at 0.542 7.538 2.747 1.483e-02 0.194 -3.082 EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 8 38007176 AB044548 8p12 Hs.411641 107

protein binding

cytosol

eukaryotic initiation factor 4E binding

insulin receptor signaling pathway

negative regulation of translational initiation

ErbB signaling pathway

mTOR signaling pathway

Insulin signaling pathway

Acute myeloid leukemia

230893_at -0.690 6.116 -2.747 1.483e-02 0.194 -3.082 DNAJC21 DnaJ (Hsp40) homolog, subfamily C, member 21 5 34965454 AI223870 5p13.2 Hs.131887 5

nucleic acid binding

intracellular

zinc ion binding

heat shock protein binding

metal ion binding

 
205512_s_at -0.364 8.186 -2.747 1.484e-02 0.194 -3.083 AIFM1 apoptosis-inducing factor, mitochondrion-associated, 1 X -129091019, -129091019, -129091018 NM_004208 Xq25-q26 Hs.424932 58

DNA binding

protein binding

nucleus

cytoplasm

mitochondrion

mitochondrial intermembrane space

DNA fragmentation involved in apoptosis

apoptosis

DNA damage response, signal transduction resulting in induction of apoptosis

electron carrier activity

oxidoreductase activity

cell redox homeostasis

FAD binding

oxidation reduction

Apoptosis

212989_at -0.456 5.201 -2.746 1.486e-02 0.194 -3.084 SGMS1 sphingomyelin synthase 1 10 -51735350 AI377497 10q11.2 Hs.654698 18

Golgi trans cisterna

protein binding

nucleus

endoplasmic reticulum

Golgi apparatus

plasma membrane

lipid metabolic process

sphingolipid metabolic process

sphingomyelin biosynthetic process

inflammatory response

integral to membrane

cell growth

kinase activity

transferase activity

integral to Golgi membrane

sphingomyelin synthase activity

negative regulation of apoptosis

ceramide cholinephosphotransferase activity

Sphingolipid metabolism

Metabolic pathways

212779_at -0.887 9.309 -2.746 1.486e-02 0.194 -3.084 KIAA1109 KIAA1109 4 123311207 AB029032 4q27 Hs.408142 12

membrane

integral to membrane

 
205349_at 0.219 4.682 2.746 1.487e-02 0.194 -3.084 GNA15 guanine nucleotide binding protein (G protein), alpha 15 (Gq class) 19 3087190 NM_002068 19p13.3 Hs.73797 28

nucleotide binding

GTPase activity

signal transducer activity

GTP binding

heterotrimeric G-protein complex

plasma membrane

protein amino acid ADP-ribosylation

signal transduction

elevation of cytosolic calcium ion concentration

activation of phospholipase C activity by muscarinic acetylcholine receptor signaling pathway

guanyl nucleotide binding

Calcium signaling pathway

218825_at 0.347 6.594 2.746 1.487e-02 0.194 -3.084 EGFL7 EGF-like-domain, multiple 7 9 138677197, 138677202 NM_016215 9q34.3 Hs.91481 12

angiogenesis

blood vessel development

vasculogenesis

calcium ion binding

extracellular region

extracellular space

multicellular organismal development

negative regulation of cell migration

 
218145_at 1.154 5.963 2.745 1.489e-02 0.194 -3.085 TRIB3 tribbles homolog 3 (Drosophila) 20 309307 NM_021158 20p13-p12.2 Hs.516826 36

transcription corepressor activity

protein kinase activity

protein kinase inhibitor activity

protein binding

protein binding

ATP binding

nucleus

nucleolus

protein amino acid phosphorylation

negative regulation of protein kinase activity

apoptosis

response to stress

protein kinase binding

protein kinase binding

regulation of MAP kinase activity

regulation of transcription

 
222892_s_at 0.291 5.275 2.745 1.490e-02 0.194 -3.086 TMEM40 transmembrane protein 40 3 -12750391 AI087937 3p25.2 Hs.475502 4

membrane

integral to membrane

 
244581_at -0.377 5.760 -2.745 1.490e-02 0.194 -3.086 ZBTB20 zinc finger and BTB domain containing 20 3 -115540212 AI828036 3q13.2 Hs.655108 13

DNA binding

protein binding

intracellular

nucleus

nucleolus

zinc ion binding

regulation of transcription

metal ion binding

 
227582_at 0.364 6.611 2.744 1.491e-02 0.194 -3.087 KLHDC9 kelch domain containing 9 1 159334777 AW079843 1q23.3 Hs.507290 3    
217113_at 0.309 4.835 2.744 1.492e-02 0.194 -3.087 AMACR alpha-methylacyl-CoA racemase 5 -34023656 AK022765 5p13 Hs.508343 53

mitochondrion

peroxisome

alpha-methylacyl-CoA racemase activity

metabolic process

isomerase activity

Primary bile acid biosynthesis

Metabolic pathways

221911_at 0.477 2.782 2.744 1.492e-02 0.195 -3.087 ETV1 ets variant 1 7 -13897382, -13897382, -13897382, -13897382 BE881590 7p21.3 Hs.22634 33

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

sequence-specific DNA binding

 
AFFX-HSAC07/X00351_5_at -0.264 11.188 -2.743 1.494e-02 0.195 -3.089 ACTB actin, beta 7 -5533304 AFFX-HSAC07/X00351_5 7p15-p12 Hs.520640 Hs.708120 206

nucleotide binding

structural constituent of cytoskeleton

protein binding

ATP binding

soluble fraction

cytoplasm

cytosol

cell motion

cortical cytoskeleton

NuA4 histone acetyltransferase complex

nitric-oxide synthase binding

MLL5-L complex

Focal adhesion

Adherens junction

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Vibrio cholerae infection

Pathogenic Escherichia coli infection - EHEC

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

215102_at 0.268 4.330 2.743 1.495e-02 0.195 -3.089 DPY19L1P1 dpy-19-like 1 pseudogene 1 (C. elegans) 7   AK026768 7p14.3 Hs.633705      
206332_s_at 0.500 6.052 2.743 1.495e-02 0.195 -3.089 IFI16 interferon, gamma-inducible protein 16 1 157246305 NM_005531 1q22 Hs.380250 42

DNA binding

double-stranded DNA binding

protein binding

nucleus

nucleoplasm

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

cell proliferation

response to virus

transcription repressor activity

myeloid cell differentiation

monocyte differentiation

DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis

 
227085_at 0.272 7.224 2.743 1.495e-02 0.195 -3.089 H2AFV H2A histone family, member V 7 -44839737, -44833012 AI823792 7p13 Hs.488189 12

nucleosome

DNA binding

nucleus

chromosome

nucleosome assembly

Systemic lupus erythematosus

202467_s_at -0.432 9.905 -2.743 1.496e-02 0.195 -3.090 COPS2 COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis) 15 -47204762 NM_004236 15q21.2 Hs.369614 37

signal transducer activity

protein binding

protein binding

nucleus

nucleolus

cytoplasm

transcription from RNA polymerase II promoter

signal transduction

signalosome

 
223821_s_at 0.336 3.157 2.742 1.497e-02 0.195 -3.090 SUSD4 sushi domain containing 4 1 -221474874, -221460783 BC004888 1q41 Hs.497841 4

membrane

integral to membrane

 
219581_at -0.416 5.782 -2.742 1.498e-02 0.195 -3.091 TSEN2 tRNA splicing endonuclease 2 homolog (S. cerevisiae) 3 12500930, 12501009, 12501009 NM_025265 3p25.2 Hs.335550 12

tRNA-intron endonuclease activity

tRNA-intron endonuclease complex

nucleic acid binding

endonuclease activity

nucleus

nucleolus

tRNA splicing, via endonucleolytic cleavage and ligation

mRNA processing

hydrolase activity

 
226483_at -0.400 4.358 -2.742 1.499e-02 0.195 -3.091 TMEM68 transmembrane protein 68 8 -56813873 AI890761 8q12.1 Hs.420076 3

metabolic process

acyltransferase activity

membrane

integral to membrane

 
202846_s_at -0.331 6.658 -2.741 1.500e-02 0.195 -3.092 PIGC phosphatidylinositol glycan anchor biosynthesis, class C 1 -170677219 NM_002642 1q23-q25 Hs.188456 12

endoplasmic reticulum

endoplasmic reticulum membrane

membrane

integral to membrane

preassembly of GPI anchor in ER membrane

transferase activity, transferring glycosyl groups

phosphatidylinositol N-acetylglucosaminyltransferase activity

Glycosylphosphatidylinositol(GPI)-anchor biosynthesis

Metabolic pathways

225619_at -0.435 3.022 -2.741 1.500e-02 0.195 -3.092 SLAIN1 SLAIN motif family, member 1 13 77170470, 77213295 AV730849 13q22.3 Hs.349955 4    
223344_s_at 0.281 5.574 2.741 1.501e-02 0.195 -3.093 MS4A7 membrane-spanning 4-domains, subfamily A, member 7 11 59902533 AB026043 11q12 Hs.530735 10

receptor activity

signal transduction

membrane

integral to membrane

 
207667_s_at -0.325 7.771 -2.741 1.502e-02 0.195 -3.094 MAP2K3 mitogen-activated protein kinase kinase 3 17 21128560, 21135373 NM_002756 17q11.2 Hs.514012 45

nucleotide binding

activation of MAPK activity

protein serine/threonine kinase activity

MAP kinase kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

inflammatory response

signal transduction

transferase activity

regulation of cytokine biosynthetic process

positive regulation of protein kinase activity

positive regulation of transcription, DNA-dependent

cardiac muscle contraction

MAPK signaling pathway

Toll-like receptor signaling pathway

Fc epsilon RI signaling pathway

GnRH signaling pathway

Amyotrophic lateral sclerosis (ALS)

232696_at 0.374 3.719 2.741 1.502e-02 0.195 -3.094 LOC648556 uncharacterized gastric protein ZA43P 16   AI394334   Hs.203594      
227525_at -0.511 5.871 -2.740 1.503e-02 0.195 -3.094 GLCCI1 glucocorticoid induced transcript 1 7 7974947 AA058770 7p21.3 Hs.131673 9    
226338_at -0.507 6.736 -2.740 1.503e-02 0.195 -3.094 TMEM55A transmembrane protein 55A 8 -92075674 AA604382 8q21.3 Hs.202517 4

lysosome

endosome

membrane

integral to membrane

hydrolase activity

 
213556_at 0.331 5.438 2.739 1.506e-02 0.195 -3.096 LOC390940 similar to R28379_1 19   BE673445 19q13.31 Hs.22049 1

phospholipase inhibitor activity

extracellular region

 
200927_s_at -0.495 7.252 -2.739 1.507e-02 0.195 -3.096 RAB14 RAB14, member RAS oncogene family 9 -122980236 AA919115 9q32-q34.11 Hs.371563 Hs.713585 19

nucleotide binding

GTPase activity

protein binding

GTP binding

intracellular

membrane fraction

lysosome

early endosome

late endosome

rough endoplasmic reticulum

Golgi stack

cytosol

plasma membrane

Golgi to endosome transport

small GTPase mediated signal transduction

neurotransmitter secretion

protein transport

vesicle-mediated transport

trans-Golgi network transport vesicle

nuclear envelope-endoplasmic reticulum network

intracellular transport

perinuclear region of cytoplasm

 
205169_at -0.495 5.198 -2.739 1.507e-02 0.195 -3.096 RBBP5 retinoblastoma binding protein 5 1 -203322601 NM_005057 1q32 Hs.519230 11

protein binding

nucleus

histone methyltransferase complex

 
215233_at -0.552 7.204 -2.738 1.509e-02 0.196 -3.097 JMJD6 jumonji domain containing 6 17 -72226119, -72220508 AA351360 17q25 Hs.514505 21

blood vessel development

kidney development

receptor activity

nucleus

plasma membrane

apoptosis

cell surface receptor linked signal transduction

multicellular organismal development

heart development

oxidoreductase activity

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine

cell differentiation

lung development

T cell differentiation in the thymus

histone demethylase activity (H3-R2 specific)

histone demethylase activity (H4-R3 specific)

macrophage activation

identical protein binding

recognition of apoptotic cell

regulation of nuclear mRNA splicing, via spliceosome

erythrocyte development

oxidation reduction

retina development in camera-type eye

histone H3-R2 demethylation

histone H4-R3 demethylation

peptidyl-lysine 5-dioxygenase activity

 
1562239_at 0.310 4.648 2.738 1.510e-02 0.196 -3.098 SGSM1 small G protein signaling modulator 1 22 23532135 AB075821 22q11.23 Hs.474397 Hs.620906 5

Rab GTPase activator activity

intracellular

Golgi apparatus

regulation of Rab GTPase activity

 
214339_s_at 0.304 5.609 2.738 1.511e-02 0.196 -3.099 MAP4K1 mitogen-activated protein kinase kinase kinase kinase 1 19 -43770120 AA744529 19q13.1-q13.4 Hs.95424 29

nucleotide binding

activation of MAPKKK activity

protein serine/threonine kinase activity

small GTPase regulator activity

protein binding

ATP binding

response to stress

protein kinase cascade

activation of JUN kinase activity

MAP kinase kinase kinase kinase activity

transferase activity

peptidyl-serine phosphorylation

MAPK signaling pathway

226894_at -0.527 5.769 -2.738 1.511e-02 0.196 -3.099 SLC35A3 solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 1 100208127 BE501976 1p21 Hs.448979 8

Golgi membrane

nucleotide-sugar transmembrane transporter activity

sugar:hydrogen symporter activity

UDP-N-acetylglucosamine transmembrane transporter activity

Golgi apparatus

UDP-N-acetylglucosamine metabolic process

nucleotide-sugar transport

UDP-N-acetylglucosamine transport

membrane

integral to membrane

 
1552878_at 0.201 2.230 2.738 1.512e-02 0.196 -3.099 ATOH7 atonal homolog 7 (Drosophila) 10 -69660387 BC032621 10q21.3 10q21.3-q22.1 Hs.175396 4

DNA binding

nucleus

multicellular organismal development

nervous system development

circadian rhythm

entrainment of circadian clock

cell differentiation

transcription regulator activity

regulation of transcription

 
238802_at 0.314 4.363 2.737 1.513e-02 0.196 -3.100 TYSND1 trypsin domain containing 1 10 -71567738 AA470128 10q22.1 Hs.533655 3

serine-type endopeptidase activity

peroxisome

proteolysis

peptidase activity

 
227037_at -0.365 5.565 -2.737 1.513e-02 0.196 -3.100 PLD6 phospholipase D family, member 6 17 -17045033 AA029500 17p11.2 Hs.31652 2

phospholipase D activity

metabolic process

membrane

integral to membrane

lipid catabolic process

hydrolase activity

NAPE-specific phospholipase D activity

 
208640_at -0.299 10.558 -2.737 1.513e-02 0.196 -3.100 RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 7 6380650 BG292367 7p22 Hs.413812 406

nucleotide binding

GTPase activity

GTP binding

intracellular

cytosol

plasma membrane

cell motion

inflammatory response

cell adhesion

small GTPase mediated signal transduction

anatomical structure morphogenesis

regulation of hydrogen peroxide metabolic process

positive regulation of lamellipodium assembly

enzyme binding

actin filament polymerization

GTP-dependent protein binding

ruffle organization

positive regulation of Rho protein signal transduction

melanosome

negative regulation of receptor-mediated endocytosis

localization within membrane

regulation of respiratory burst

MAPK signaling pathway

Chemokine signaling pathway

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Focal adhesion

Adherens junction

Toll-like receptor signaling pathway

Natural killer cell mediated cytotoxicity

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Amyotrophic lateral sclerosis (ALS)

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

229622_at 0.518 5.148 2.737 1.514e-02 0.196 -3.100 FAM132B family with sequence similarity 132, member B 2   H16258 2q37.3 Hs.24951 2

extracellular region

 
208983_s_at 0.476 6.004 2.737 1.514e-02 0.196 -3.101 PECAM1 platelet/endothelial cell adhesion molecule 17 -59753594 M37780 17q23 Hs.514412 Hs.718947 147

protein binding

extracellular space

plasma membrane

plasma membrane

cell adhesion

signal transduction

cell recognition

integral to membrane

platelet alpha granule membrane

Cell adhesion molecules (CAMs)

Leukocyte transendothelial migration

217525_at 0.383 5.631 2.736 1.516e-02 0.196 -3.102 OLFML1 olfactomedin-like 1 11 7463330 AW305097 11p15.4 Hs.503500 5

extracellular region

 
228963_at -0.366 6.202 -2.736 1.517e-02 0.196 -3.102 RSBN1L round spermatid basic protein 1-like 7 77163678 BE856028 7q11.23 Hs.592289 Hs.72451 4

nucleus

 
231781_s_at -0.687 9.640 -2.735 1.519e-02 0.196 -3.103 LRRC2 leucine rich repeat containing 2 3 -46531881, -46531881 AK021919 3p21.31 Hs.657345 7

protein binding

 
238406_x_at 0.300 6.238 2.735 1.519e-02 0.196 -3.104 SEZ6L2 seizure related 6 homolog (mouse)-like 2 16 -29789980 AI734001 16p11.2 Hs.6314 10

endoplasmic reticulum

plasma membrane

integral to membrane

 
217645_at -0.334 6.272 -2.735 1.521e-02 0.196 -3.105 COX16 COX16 cytochrome c oxidase assembly homolog (S. cerevisiae) 14 -69861551 AW088547 14q24.2 Hs.709581 5

mitochondrion

membrane

integral to membrane

mitochondrial membrane

 
231185_at 0.277 5.098 2.734 1.522e-02 0.196 -3.105 KIAA1161 KIAA1161 9 -34358906 AI479773 9p13.3 Hs.522083 3

hydrolase activity, hydrolyzing O-glycosyl compounds

carbohydrate metabolic process

metabolic process

membrane

integral to membrane

 
206553_at 0.262 4.702 2.734 1.522e-02 0.196 -3.105 OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa 12 111900656, 111900656, 111900656 NM_002535 12q24.2 Hs.414332 17

nucleotide binding

RNA binding

ATP binding

nucleus

mitochondrion

endoplasmic reticulum

microsome

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

immune response

membrane

transferase activity

nucleotidyltransferase activity

 
225710_at 0.477 5.845 2.734 1.522e-02 0.196 -3.106 GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4 3 -180596569 H99792 3q26.33 Hs.173030 18

signal transducer activity

signal transduction

hormone-mediated signaling

Chemokine signaling pathway

202900_s_at -0.397 7.026 -2.734 1.522e-02 0.196 -3.106 NUP88 nucleoporin 88kDa 17 -5230143 NM_002532 17p13.2 Hs.584784 24

transporter activity

nucleus

nuclear pore

cytosol

protein transport

mRNA transport

intracellular protein transmembrane transport

 
214185_at 0.271 4.817 2.733 1.524e-02 0.197 -3.107 KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 1 32252077 AW592227 1p32 Hs.709204 86

G2/M transition of mitotic cell cycle

DNA binding

RNA binding

SH3/SH2 adaptor activity

protein binding

nucleus

mRNA processing

cell cycle

cell cycle arrest

cell surface receptor linked signal transduction

cell proliferation

membrane

negative regulation of transcription

transcription repressor activity

SH3 domain binding

regulation of RNA export from nucleus

 
220349_s_at 0.344 7.377 2.733 1.525e-02 0.197 -3.107 ENGASE endo-beta-N-acetylglucosaminidase 17 74582613 NM_022759 17q25.3 Hs.29288 5

intracellular

cytoplasm

cytosol

metabolic process

hydrolase activity, acting on glycosyl bonds

mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity

Other glycan degradation

209800_at 0.243 4.933 2.733 1.525e-02 0.197 -3.107 KRT16 keratin 16 17 -37019556 AF061812 17q12-q21 Hs.655160 29

structural constituent of cytoskeleton

protein binding

intermediate filament

cell proliferation

epidermis development

intermediate filament cytoskeleton organization

 
201069_at 0.477 6.784 2.733 1.526e-02 0.197 -3.108 MMP2 matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase) 16 54070581, 54072974 NM_004530 16q13-q21 Hs.513617 587

response to hypoxia

blood vessel maturation

intramembranous ossification

metalloendopeptidase activity

calcium ion binding

protein binding

extracellular region

proteinaceous extracellular matrix

extracellular space

plasma membrane

proteolysis

metabolic process

peptidase activity

zinc ion binding

sarcomere

collagen catabolic process

intracellular membrane-bounded organelle

face morphogenesis

bone trabecula formation

Leukocyte transendothelial migration

GnRH signaling pathway

Pathways in cancer

Bladder cancer

1554380_at -0.204 4.998 -2.733 1.527e-02 0.197 -3.108 NEK11 NIMA (never in mitosis gene a)- related kinase 11 3 132228383, 132228383 AB071997 3q22.1 Hs.657336 8

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

ATP binding

nucleus

nucleolus

protein amino acid phosphorylation

cell cycle

protein kinase cascade

transferase activity

manganese ion binding

intra-S DNA damage checkpoint

identical protein binding

 
91816_f_at 0.316 3.547 2.733 1.527e-02 0.197 -3.108 MEX3D mex-3 homolog D (C. elegans) 19 -1505667 C18318 19p13.3 Hs.436495 4

RNA binding

protein binding

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
1568248_x_at 0.234 5.515 2.732 1.527e-02 0.197 -3.109 SNORA71B small nucleolar RNA, H/ACA box 71B 20 -36487256 Y11166 20q11.23 Hs.400876 2    
220626_at 0.245 5.919 2.732 1.529e-02 0.197 -3.110 SERPINA10 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10 14 -93819402, -93819402 NM_016186 14q32.13 Hs.118620 15

serine-type endopeptidase inhibitor activity

extracellular region

peptidase inhibitor activity

 
39549_at 0.383 4.601 2.732 1.529e-02 0.197 -3.110 NPAS2 neuronal PAS domain protein 2 2 100803044 AI743090 2q11.2 Hs.156832 Hs.705895 23

transcription factor activity

signal transducer activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

signal transduction

central nervous system development

circadian sleep/wake cycle

locomotor rhythm

positive regulation of transcription from RNA polymerase II promoter

rhythmic process

Hsp90 protein binding

Circadian rhythm - mammal

32541_at -0.334 7.208 -2.732 1.530e-02 0.197 -3.110 PPP3CC protein phosphatase 3 (formerly 2B), catalytic subunit, gamma isoform 8 22354540 S46622 8p21.3 Hs.655661 21

phosphoprotein phosphatase activity

iron ion binding

calmodulin binding

cytosol

zinc ion binding

activation of pro-apoptotic gene products

hydrolase activity

metal ion binding

MAPK signaling pathway

Calcium signaling pathway

Apoptosis

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Long-term potentiation

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

241741_at -0.605 5.885 -2.731 1.531e-02 0.197 -3.111 CRLS1 cardiolipin synthase 1 20 5934738, 5935897 AI339837 20p13-p12.3 Hs.224764 14

mitochondrion

mitochondrial inner membrane

phospholipid biosynthetic process

membrane

integral to membrane

transferase activity

phosphotransferase activity, for other substituted phosphate groups

Glycerophospholipid metabolism

Metabolic pathways

218520_at -0.361 6.533 -2.731 1.532e-02 0.197 -3.111 TBK1 TANK-binding kinase 1 12 63132203 NM_013254 12q14.1 Hs.505874 Hs.607889 51

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

cytosol

protein amino acid phosphorylation

response to virus

transferase activity

positive regulation of I-kappaB kinase/NF-kappaB cascade

interspecies interaction between organisms

innate immune response

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

203860_at 0.521 6.662 2.731 1.532e-02 0.197 -3.111 PCCA propionyl Coenzyme A carboxylase, alpha polypeptide 13 99539337 NM_000282 13q32 Hs.80741 29

nucleotide binding

propionyl-CoA carboxylase activity

ATP binding

mitochondrion

mitochondrial matrix

metabolic process

biotin binding

ligase activity

Valine, leucine and isoleucine degradation

Propanoate metabolism

Metabolic pathways

201007_at 0.368 12.162 2.731 1.532e-02 0.197 -3.112 HADHB hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), beta subunit 2 26321119 NM_000183 2p23 Hs.515848 23

3-hydroxyacyl-CoA dehydrogenase activity

acetyl-CoA C-acyltransferase activity

enoyl-CoA hydratase activity

mitochondrion

mitochondrial envelope

mitochondrial inner membrane

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

metabolic process

acyltransferase activity

transferase activity

mitochondrial nucleoid

Fatty acid elongation in mitochondria

Fatty acid metabolism

Valine, leucine and isoleucine degradation

Metabolic pathways

202979_s_at -0.585 5.176 -2.730 1.534e-02 0.197 -3.113 CREBZF CREB/ATF bZIP transcription factor 11 -85046257 NM_021212 11q14 Hs.535319 Hs.595940 Hs.714910 12

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

response to virus

negative regulation of transcription

specific transcriptional repressor activity

sequence-specific DNA binding

negative regulation of gene expression, epigenetic

regulation of transcription factor activity

 
228601_at 0.291 4.627 2.730 1.536e-02 0.197 -3.113 LOC401022 hypothetical LOC401022 2   AW340112 2q31.2 Hs.98661 1    
1560136_at -0.267 5.425 -2.729 1.537e-02 0.197 -3.114 ARL5C ADP-ribosylation factor-like 5C 17 -34566673 BQ027290 17q12 Hs.568007 2

nucleotide binding

GTP binding

 
239835_at -1.183 3.756 -2.729 1.537e-02 0.197 -3.114 KBTBD8 kelch repeat and BTB (POZ) domain containing 8 3 67131416 AA669114 3p14 Hs.116665 5

protein binding

 
226224_at -0.265 7.032 -2.729 1.537e-02 0.197 -3.114 FOXK2 forkhead box K2 17 78070882 AI798846 17q25 Hs.591140 11

magnesium ion binding

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

sequence-specific DNA binding

 
204034_at -0.302 7.331 -2.729 1.538e-02 0.197 -3.115 ETHE1 ethylmalonic encephalopathy 1 19 -48702710 NM_014297 19q13.31 Hs.7486 14

nucleus

cytoplasm

mitochondrion

mitochondrial matrix

zinc ion binding

hydrolase activity

metal ion binding

 
226263_at -0.414 6.316 -2.729 1.538e-02 0.197 -3.115 SNRNP48 small nuclear ribonucleoprotein 48kDa (U11/U12) 6 7535430 AA630674 6p24.3 Hs.13366 6

nucleus

U12-type spliceosomal complex

mRNA processing

zinc ion binding

RNA splicing

metal ion binding

 
244771_at -0.385 8.801 -2.728 1.539e-02 0.197 -3.116 KLHDC6 kelch domain containing 6 3 129124591 AI038623 3q21.3 Hs.132087 4

protein binding

 
205389_s_at 0.437 9.476 2.728 1.541e-02 0.198 -3.117 ANK1 ankyrin 1, erythrocytic 8 -41629901, -41629901, -41629900 AI659683 8p11.1 Hs.654438 Hs.667377 49

structural constituent of cytoskeleton

cytoplasm

plasma membrane

exocytosis

cytoskeleton organization

signal transduction

cytoskeletal adaptor activity

spectrin-associated cytoskeleton

basolateral plasma membrane

sarcoplasmic reticulum

enzyme binding

spectrin binding

M band

maintenance of epithelial cell apical/basal polarity

 
230196_x_at 0.259 5.909 2.727 1.543e-02 0.198 -3.118 ARHGAP23 Rho GTPase activating protein 23 17 33867169 AI123323 17q12 Hs.374446 4

GTPase activator activity

protein binding

intracellular

signal transduction

 
1554080_at -0.417 7.003 -2.727 1.543e-02 0.198 -3.118 RQCD1 RCD1 required for cell differentiation1 homolog (S. pombe) 2 219141921 BC007102 2q35 Hs.148767 6

protein binding

nucleus

sex differentiation

cytokine-mediated signaling pathway

regulation of transcription

RNA degradation

202787_s_at -0.359 7.130 -2.727 1.543e-02 0.198 -3.118 MAPKAPK3 mitogen-activated protein kinase-activated protein kinase 3 3 50629604 U43784 3p21.3 Hs.234521 20

nucleotide binding

protein serine/threonine kinase activity

MAP kinase kinase activity

ATP binding

nucleus

cytoplasm

cytosol

protein amino acid phosphorylation

response to stress

intracellular signaling cascade

Ras protein signal transduction

transferase activity

MAPK signaling pathway

VEGF signaling pathway

1559163_at -0.205 2.220 -2.727 1.544e-02 0.198 -3.119 LOC285954 hypothetical LOC285954 7 41700038, 41700070 AK096266 7p14.1 Hs.656869 2    
218442_at -0.404 7.266 -2.727 1.545e-02 0.198 -3.119 TTC4 tetratricopeptide repeat domain 4 1 54954116 NM_004623 1p32.3 Hs.412482 10

binding

 
203283_s_at -0.310 3.089 -2.726 1.546e-02 0.198 -3.119 HS2ST1 heparan sulfate 2-O-sulfotransferase 1 1 87152922, 87152922 AK023260 1p31.1-p22.1 Hs.719144 9

Golgi apparatus

membrane

integral to membrane

transferase activity

Heparan sulfate biosynthesis

226505_x_at -0.472 8.085 -2.726 1.547e-02 0.198 -3.120 USP32 ubiquitin specific peptidase 32 17 -55609472 AI148567 17q23.1-q23.2 Hs.132868 6

ubiquitin thiolesterase activity

calcium ion binding

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

membrane

 
227430_at -0.243 5.288 -2.726 1.548e-02 0.198 -3.121 ZC3H10 zinc finger CCCH-type containing 10 12 54798296 AI969773 12q13.2 Hs.632706 7

nucleic acid binding

zinc ion binding

metal ion binding

 
204992_s_at -0.473 10.321 -2.725 1.549e-02 0.198 -3.121 PFN2 profilin 2 3 -151165380 NM_002628 3q25.1-q25.2 Hs.91747 24

actin binding

protein binding

phosphatidylinositol-4,5-bisphosphate binding

cytoplasm

regulation of actin polymerization or depolymerization

actin cytoskeleton

actin cytoskeleton organization

Regulation of actin cytoskeleton

205279_s_at 0.539 4.227 2.725 1.549e-02 0.198 -3.121 GLRB glycine receptor, beta 4 158216726 AF094754 4q31.3 Hs.32973 14

startle response

ion channel activity

extracellular ligand-gated ion channel activity

protein binding

membrane fraction

plasma membrane

integral to plasma membrane

ion transport

chloride transport

neuropeptide signaling pathway

synaptic transmission

acrosome reaction

nervous system development

visual perception

adult walking behavior

glycine binding

extracellular-glycine-gated chloride channel activity

cell junction

neurotransmitter receptor activity

chloride ion binding

chloride channel complex

regulation of membrane potential

synapse

postsynaptic membrane

synaptic transmission, glycinergic

righting reflex

Neuroactive ligand-receptor interaction

202955_s_at -0.320 5.915 -2.725 1.549e-02 0.198 -3.121 ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited) 8 -68272450 AF084520 8q13 Hs.656902 22

ARF guanyl-nucleotide exchange factor activity

binding

intracellular

exocytosis

ARF GTPase activator activity

myosin binding

regulation of ARF protein signal transduction

 
206961_s_at 0.240 4.034 2.725 1.551e-02 0.198 -3.122 MED20 mediator complex subunit 20 6 -41981069 NM_004275 6p21.1 Hs.278434 11

DNA-directed RNA polymerase activity

protein binding

nucleus

regulation of transcription from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

mediator complex

regulation of transcription

 
201020_at -0.487 7.768 -2.725 1.551e-02 0.198 -3.123 YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide 22 30670478 NM_003405 22q12.3 Hs.226755 76

actin binding

insulin-like growth factor receptor binding

cytoplasm

glucocorticoid catabolic process

intracellular protein transport

transcription activator activity

enzyme binding

protein domain specific binding

glucocorticoid receptor binding

glucocorticoid receptor signaling pathway

regulation of neuron differentiation

positive regulation of transcription

regulation of synaptic plasticity

negative regulation of dendrite morphogenesis

Cell cycle

Neurotrophin signaling pathway

214678_x_at -0.510 6.519 -2.725 1.551e-02 0.198 -3.123 ZFX zinc finger protein, X-linked X 24079728 R51161 Xp21.3 Hs.336681 13

DNA binding

transcription coactivator activity

intracellular

nucleus

nucleolus

zinc ion binding

transcription regulator activity

regulation of transcription

metal ion binding

 
209904_at 0.337 13.411 2.724 1.552e-02 0.198 -3.123 TNNC1 troponin C type 1 (slow) 3 -52460147 AF020769 3p21.3-p14.3 Hs.118845 48

calcium ion binding

troponin complex

regulation of muscle contraction

troponin I binding

troponin T binding

regulation of muscle filament sliding speed

protein homodimerization activity

regulation of ATPase activity

calcium-dependent protein binding

actin filament binding

ventricular cardiac muscle morphogenesis

cardiac muscle contraction

Calcium signaling pathway

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

218710_at -0.269 6.208 -2.724 1.552e-02 0.198 -3.123 TTC27 tetratricopeptide repeat domain 27 2 32706632 NM_017735 2p22.3 Hs.468125 6

protein binding

cellular_component

biological_process

 
222408_s_at -0.348 8.246 -2.724 1.553e-02 0.198 -3.124 YPEL5 yippee-like 5 (Drosophila) 2 30223253 BC000836 2p23.1 Hs.515890 6    
211440_x_at -0.235 3.071 -2.724 1.553e-02 0.198 -3.124 CYP3A43 cytochrome P450, family 3, subfamily A, polypeptide 43 7 99263571 AF280110 7q21.1 Hs.306220 Hs.654391 Hs.695915 17

endoplasmic reticulum

microsome

electron carrier activity

membrane

heme binding

metal ion binding

oxidation reduction

aromatase activity

gamma-Hexachlorocyclohexane degradation

Linoleic acid metabolism

Retinol metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

Drug metabolism - other enzymes

Metabolic pathways

202501_at -0.504 7.499 -2.724 1.554e-02 0.198 -3.124 MAPRE2 microtubule-associated protein, RP/EB family, member 2 18 30810889, 30812205, 30875321 NM_014268 18q12.1-q12.2 Hs.532824 27

cytoplasm

microtubule

cell cycle

mitosis

signal transduction

microtubule binding

cell proliferation

cell division

 
205147_x_at 0.313 4.177 2.723 1.556e-02 0.198 -3.125 NCF4 neutrophil cytosolic factor 4, 40kDa 22 35586975 NM_000631 22q13.1 Hs.474781 51

cytoplasm

cytosol

immune response

cell communication

membrane

phosphoinositide binding

NADPH oxidase complex

protein dimerization activity

oxidation reduction

Leukocyte transendothelial migration

205657_at 0.219 6.751 2.723 1.557e-02 0.198 -3.126 HAAO 3-hydroxyanthranilate 3,4-dioxygenase 2 -42847732 NM_012205 2p21 Hs.368805 12

3-hydroxyanthranilate 3,4-dioxygenase activity

3-hydroxyanthranilate 3,4-dioxygenase activity

soluble fraction

cytoplasm

cytosol

cytosol

ferrous iron binding

electron carrier activity

response to zinc ion

oxidoreductase activity

pyridine nucleotide biosynthetic process

NAD metabolic process

quinolinate biosynthetic process

response to cadmium ion

metal ion binding

oxidation reduction

neuron maintenance

Tryptophan metabolism

Metabolic pathways

223023_at 0.260 5.774 2.723 1.557e-02 0.198 -3.126 BET1L blocked early in transport 1 homolog (S. cerevisiae)-like 11 -192923 BC000688 11p15.5 Hs.414418 14

SNAP receptor activity

endosome

Golgi apparatus

protein transport

membrane

integral to membrane

SNARE complex

retrograde transport, endosome to Golgi

SNARE interactions in vesicular transport

227190_at 0.427 5.569 2.723 1.558e-02 0.198 -3.126 TMEM37 transmembrane protein 37 2 119905915 N93191 2q14.2 Hs.26216 3

voltage-gated ion channel activity

calcium channel activity

calcium ion binding

ion transport

calcium ion transport

membrane

integral to membrane

 
201652_at -0.226 9.954 -2.722 1.558e-02 0.198 -3.127 COPS5 COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis) 8 -68117868 NM_006837 8q13.1 Hs.491912 79

protein deneddylation

transcription coactivator activity

translation initiation factor activity

protein binding

nucleus

nucleolus

cytoplasm

eukaryotic translation initiation factor 3 complex

transcription from RNA polymerase II promoter

translation

signalosome

peptidase activity

metallopeptidase activity

metal ion binding

regulation of cell cycle

 
219008_at 0.315 2.769 2.722 1.559e-02 0.198 -3.127 C2orf43 chromosome 2 open reading frame 43 2 -20748298 NM_021925 2p24.1 Hs.187823 1    
204159_at -0.581 7.084 -2.722 1.559e-02 0.198 -3.127 CDKN2C cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) 1 51206954, 51208229 NM_001262 1p32 Hs.525324 Hs.716664 45

regulation of cyclin-dependent protein kinase activity

G1/S transition of mitotic cell cycle

cyclin-dependent protein kinase inhibitor activity

protein binding

nucleus

cytoplasm

induction of apoptosis

cell cycle

cell cycle arrest

negative regulation of cell proliferation

protein kinase binding

negative regulation of cell growth

negative regulation of phosphorylation

oligodendrocyte differentiation

Cell cycle

204771_s_at -0.377 6.755 -2.722 1.561e-02 0.199 -3.128 TTF1 transcription termination factor, RNA polymerase I 9 -134240757 AI632304 9q34.13 Hs.54780 18

DNA binding

transcription termination factor activity

nucleus

nucleoplasm

nucleolus

transcription termination

negative regulation of DNA replication

regulation of transcription

 
201993_x_at -0.256 8.794 -2.722 1.561e-02 0.199 -3.129 HNRPDL heterogeneous nuclear ribonucleoprotein D-like 4 -83563370 NM_005463 4q13-q21 Hs.527105 14

nucleotide binding

DNA binding

double-stranded DNA binding

single-stranded DNA binding

RNA binding

protein binding

nucleus

cytoplasm

RNA processing

poly(A) RNA binding

heterogeneous nuclear ribonucleoprotein complex

regulation of transcription

 
215898_at -0.273 3.670 -2.721 1.562e-02 0.199 -3.129 TTLL5 tubulin tyrosine ligase-like family, member 5 14 75197373 AK021879 14q24.3 Hs.709609 7

tubulin-tyrosine ligase activity

nucleus

cytoplasm

cilium

microtubule basal body

transcription

protein modification process

ligase activity

 
221970_s_at -0.294 7.785 -2.721 1.564e-02 0.199 -3.130 NOL11 nucleolar protein 11 17 63144522 AU158148 17q24.2 Hs.463936 5

nucleus

nucleolus

 
1554579_a_at -0.505 8.489 -2.720 1.566e-02 0.199 -3.131 MYO18B myosin XVIIIB 22 24468119 AB042648 22q11.2-q12.1 Hs.417959 11

nucleotide binding

motor activity

actin binding

protein binding

ATP binding

nucleus

cytoplasm

unconventional myosin complex

sarcomere

 
1555314_at 0.258 3.178 2.720 1.566e-02 0.199 -3.132 WDR19 WD repeat domain 19 4 38860418 BC032578 4p14 Hs.438482 8

protein binding

intracellular protein transport

vesicle-mediated transport

 
208614_s_at 0.406 7.005 2.720 1.567e-02 0.199 -3.132 FLNB filamin B, beta 3 57969166 M62994 3p14.3 Hs.476448 38

actin binding

protein binding

cytoplasm

cell cortex

cytoskeletal anchoring at plasma membrane

signal transduction

multicellular organismal development

muscle organ development

actin cytoskeleton

integral to membrane

Z disc

actin cytoskeleton organization

cell differentiation

MAPK signaling pathway

Focal adhesion

65630_at 0.327 6.360 2.720 1.567e-02 0.199 -3.132 TMEM80 transmembrane protein 80 11 685615 AI742455 11p15.5 Hs.448664 2

membrane

integral to membrane

 
207664_at 0.251 3.052 2.719 1.568e-02 0.199 -3.132 ADAM2 ADAM metallopeptidase domain 2 8 -39720411 NM_001464 8p11.2 Hs.177959 12

metalloendopeptidase activity

integrin binding

protein binding

integral to plasma membrane

proteolysis

cell adhesion

fusion of sperm to egg plasma membrane

zinc ion binding

visual learning

membrane

adult behavior

 
229674_at 0.292 4.617 2.719 1.570e-02 0.199 -3.133 SERTAD4 SERTA domain containing 4 1 208472817 AL035414 1q32.1-q41 Hs.600545 2    
223418_x_at -0.463 5.921 -2.718 1.572e-02 0.199 -3.135 ANKRD13C ankyrin repeat domain 13C 1 -70497272 AL136717 1p32.3-p31.3 Hs.105016 10

endoplasmic reticulum

 
224832_at -0.318 7.087 -2.718 1.572e-02 0.199 -3.135 DUSP16 dual specificity phosphatase 16 12 -12520097 AB051487 12p13 Hs.536535 12

inactivation of MAPK activity

protein tyrosine phosphatase activity

protein binding

nucleus

cytoplasm

protein amino acid dephosphorylation

hydrolase activity

MAP kinase tyrosine/serine/threonine phosphatase activity

MAPK export from nucleus

MAPK phosphatase export from nucleus, leptomycin B sensitive

MAPK signaling pathway

209277_at 0.646 3.367 2.718 1.573e-02 0.199 -3.135 TFPI2 tissue factor pathway inhibitor 2 7 -93353680 AL574096 7q22 Hs.438231 63

serine-type endopeptidase inhibitor activity

extracellular matrix structural constituent

extracellular region

proteinaceous extracellular matrix

blood coagulation

peptidase inhibitor activity

 
241389_at 0.187 6.607 2.718 1.574e-02 0.200 -3.136 CHRNB2 cholinergic receptor, nicotinic, beta 2 (neuronal) 1 152806880 BE261002 1q21.3 Hs.2306 59

conditioned taste aversion

response to hypoxia

nicotinic acetylcholine-activated cation-selective channel activity

ion channel activity

extracellular ligand-gated ion channel activity

protein binding

plasma membrane

nicotinic acetylcholine-gated receptor-channel complex

ion transport

calcium ion transport

smooth muscle contraction

signal transduction

synaptic transmission, cholinergic

visual perception

sensory perception of sound

memory

locomotory behavior

visual learning

external side of plasma membrane

acetylcholine receptor activity

integral to membrane

sensory perception of pain

vestibulocochlear nerve development

optic nerve morphogenesis

lateral geniculate nucleus development

central nervous system projection neuron axonogenesis

cell junction

positive regulation of B cell proliferation

positive regulation of synaptic transmission, dopaminergic

positive regulation of dopamine secretion

behavioral response to nicotine

social behavior

regulation of dopamine metabolic process

B cell activation

response to cocaine

regulation of circadian sleep/wake cycle, REM sleep

regulation of circadian sleep/wake cycle, non-REM sleep

synapse

postsynaptic membrane

response to ethanol

negative regulation of action potential

regulation of dendrite morphogenesis

cognition

membrane depolarization

regulation of synaptogenesis

synaptic transmission involved in micturition

 
205051_s_at 0.533 4.706 2.717 1.575e-02 0.200 -3.137 KIT v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog 4 55218851 NM_000222 4q11-q12 Hs.479754 381

nucleotide binding

myeloid progenitor cell differentiation

lymphoid progenitor cell differentiation

myeloid leukocyte differentiation

receptor signaling protein tyrosine kinase activity

receptor activity

stem cell factor receptor activity

protein binding

ATP binding

extracellular space

nucleus

nucleolus

cytoplasm

plasma membrane

glycosphingolipid metabolic process

signal transduction

transmembrane receptor protein tyrosine kinase signaling pathway

protein kinase cascade

spermatogenesis

spermatid development

positive regulation of cell proliferation

response to radiation

external side of plasma membrane

positive regulation of gene expression

integral to membrane

transferase activity

peptidyl-tyrosine phosphorylation

cytokine-mediated signaling pathway

hemopoiesis

germ cell programmed cell death

negative regulation of programmed cell death

positive regulation of MAP kinase activity

regulation of pigmentation during development

epithelial cell proliferation

Cytokine-cytokine receptor interaction

Endocytosis

Hematopoietic cell lineage

Melanogenesis

Pathways in cancer

Acute myeloid leukemia

212992_at 0.298 3.712 2.717 1.576e-02 0.200 -3.137 AHNAK2 AHNAK nucleoprotein 2 14 -104474635 AI935123 14q32.33 Hs.441783 3

protein binding

nucleus

cytoplasm

keratinization

 
218221_at -0.379 6.744 -2.717 1.576e-02 0.200 -3.137 ARNT aryl hydrocarbon receptor nuclear translocator 1 -149048809 AL042842 1q21 Hs.632446 88

response to hypoxia

positive regulation of endothelial cell proliferation

RNA polymerase II transcription factor activity, enhancer binding

transcription coactivator activity

signal transducer activity

nucleus

regulation of transcription, DNA-dependent

signal transduction

positive regulation vascular endothelial growth factor production

aryl hydrocarbon receptor binding

positive regulation of vascular endothelial growth factor receptor signaling pathway

mRNA transcription from RNA polymerase II promoter

positive regulation of gene-specific transcription

sequence-specific DNA binding

regulation of transcription from RNA polymerase II promoter in response to oxidative stress

positive regulation of erythrocyte differentiation

positive regulation of glycolysis

positive regulation of hormone biosynthetic process

protein heterodimerization activity

Pathways in cancer

Renal cell carcinoma

224692_at -0.549 6.812 -2.716 1.577e-02 0.200 -3.138 PPP1R15B protein phosphatase 1, regulatory (inhibitor) subunit 15B 1 -202639114 BF796046 1q32.1 Hs.304376 6

protein phosphatase type 1 complex

protein serine/threonine phosphatase activity

regulation of translation

response to oxidative stress

ER overload response

response to hydrogen peroxide

 
210632_s_at -0.430 9.118 -2.716 1.578e-02 0.200 -3.138 SGCA sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein) 17 45598364 L35853 17q21 Hs.463412 23

calcium ion binding

protein binding

cytoplasm

cytoskeleton

muscle contraction

muscle organ development

dystrophin-associated glycoprotein complex

sarcoglycan complex

integral to membrane

sarcolemma

membrane raft

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

1557480_a_at -0.552 9.889 -2.716 1.579e-02 0.200 -3.139 DYSFIP1 dysferlin interacting protein 1 17 -77384656 AI972007 17q25.3 Hs.454720 5    
218558_s_at 0.313 8.800 2.716 1.579e-02 0.200 -3.139 MRPL39 mitochondrial ribosomal protein L39 21 -25879838 NM_017446 21q21.3 Hs.420696 10

nucleotide binding

molecular_function

mitochondrion

mitochondrial ribosome

ribosome

biological_process

 
212337_at -0.277 6.380 -2.715 1.581e-02 0.200 -3.140 TUG1 taurine upregulated 1 (non-protein coding) 22 29695633 AI687738 22q12.2 Hs.554829 7    
217675_at 0.252 3.419 2.715 1.581e-02 0.200 -3.140 ZBTB7C zinc finger and BTB domain containing 7C 18 -43807742 BE734331 18q21.1 Hs.515388 4

nucleic acid binding

protein binding

intracellular

zinc ion binding

metal ion binding

 
206306_at 1.215 8.987 2.715 1.581e-02 0.200 -3.140 RYR3 ryanodine receptor 3 15 31390468 NM_001036 15q14-q15 Hs.709373 21

receptor activity

ion channel activity

ryanodine-sensitive calcium-release channel activity

calcium ion binding

ion transport

calcium ion transport

cellular calcium ion homeostasis

striated muscle contraction

calcium-release channel activity

membrane

integral to membrane

junctional membrane complex

sarcoplasmic reticulum membrane

Calcium signaling pathway

Alzheimer's disease

1552678_a_at -0.578 6.183 -2.715 1.582e-02 0.200 -3.140 USP28 ubiquitin specific peptidase 28 11 -113173806 NM_020886 11q23 Hs.503891 9

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
202981_x_at -0.311 8.135 -2.715 1.583e-02 0.200 -3.141 SIAH1 seven in absentia homolog 1 (Drosophila) 16 -46951954, -46951946 NM_003031 16q12 Hs.295923 64

ubiquitin-protein ligase activity

nucleus

cytoplasm

proteolysis

ubiquitin-dependent protein catabolic process

apoptosis

cell cycle

multicellular organismal development

spermatogenesis

nervous system development

axon guidance

protein C-terminus binding

zinc ion binding

anatomical structure morphogenesis

protein ubiquitination

ligase activity

cell differentiation

metal ion binding

p53 signaling pathway

Ubiquitin mediated proteolysis

Wnt signaling pathway

202565_s_at -0.370 11.809 -2.715 1.583e-02 0.200 -3.141 SVIL supervillin 10 -29786282, -29786282 NM_003174 10p11.2 Hs.499209 23

podosome

calcium ion binding

nucleus

cytoplasm

plasma membrane

cytoskeleton organization

skeletal muscle tissue development

cell projection

costamere

actin filament binding

 
203695_s_at 1.081 7.145 2.714 1.585e-02 0.200 -3.142 DFNA5 deafness, autosomal dominant 5 7 -24704498, -24704498 NM_004403 7p15 Hs.520708 23

sensory perception of sound

inner ear receptor cell differentiation

 
243225_at 0.275 4.023 2.714 1.585e-02 0.200 -3.142 LOC283481 hypothetical protein LOC283481 13   AI042341 13q33.1 Hs.646604 2    
1566832_at 0.190 2.437 2.714 1.586e-02 0.200 -3.143 TOP1P2 topoisomerase (DNA) I pseudogene 2 22 23490467 M55630 22q11.2-q13.1 22q11.23 Hs.381281 1    
204903_x_at 0.238 7.200 2.714 1.586e-02 0.200 -3.143 ATG4B ATG4 autophagy related 4 homolog B (S. cerevisiae) 2 242225699, 54821 AL080168 2q37.3 Hs.283610 19

protein binding

cytoplasm

microtubule associated complex

proteolysis

autophagy

peptidase activity

cysteine-type peptidase activity

protein transport

modification-dependent protein catabolic process

Regulation of autophagy

203259_s_at 0.399 10.094 2.713 1.589e-02 0.200 -3.144 HDDC2 HD domain containing 2 6 -125638194 BC001671 6q13-q24.3 Hs.32826 3

catalytic activity

 
231950_at 0.356 4.964 2.713 1.589e-02 0.200 -3.145 ZNF658 zinc finger protein 658 9 -40761401 AW874634 9p13.1 Hs.522147 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
202371_at 0.406 9.462 2.713 1.590e-02 0.201 -3.145 TCEAL4 transcription elongation factor A (SII)-like 4 X 102727074 NM_024863 Xq22.2 Hs.194329 10

nucleus

regulation of transcription

 
201046_s_at -0.398 10.580 -2.712 1.590e-02 0.201 -3.145 RAD23A RAD23 homolog A (S. cerevisiae) 19 12917653 NM_005053 19p13.2 Hs.643267 40

damaged DNA binding

single-stranded DNA binding

protein binding

nucleus

nucleotide-excision repair

response to DNA damage stimulus

proteasomal ubiquitin-dependent protein catabolic process

interspecies interaction between organisms

Nucleotide excision repair

222542_x_at -0.681 6.701 -2.712 1.591e-02 0.201 -3.146 CABC1 chaperone, ABC1 activity of bc1 complex homolog (S. pombe) 1 225194560 BF724826 1q42.13 Hs.118241 10

nucleotide binding

ATP binding

mitochondrion

cell death

kinase activity

transferase activity

 
236154_at -0.573 7.955 -2.712 1.593e-02 0.201 -3.147 QKI quaking homolog, KH domain RNA binding (mouse) 6 163755664, 163755664 R41907 6q26 6q26-q27 Hs.510324 Hs.593520 23

RNA binding

protein binding

nucleus

nucleolus

cytoplasm

plasma membrane

mRNA processing

regulation of translation

transport

multicellular organismal development

RNA splicing

SH3 domain binding

cell differentiation

mRNA transport

 
206407_s_at 0.457 4.935 2.712 1.593e-02 0.201 -3.147 CCL13 chemokine (C-C motif) ligand 13 17 29707583 NM_005408 17q11.2 Hs.414629 30

signal transducer activity

extracellular region

extracellular space

cellular calcium ion homeostasis

chemotaxis

inflammatory response

immune response

signal transduction

cell-cell signaling

chemokine activity

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

209652_s_at 0.301 5.062 2.711 1.594e-02 0.201 -3.147 PGF placental growth factor 14 -74478290 BC001422 14q24-q31 Hs.252820 79

angiogenesis

extracellular region

signal transduction

cell-cell signaling

multicellular organismal development

growth factor activity

heparin binding

positive regulation of cell proliferation

membrane

cell differentiation

mTOR signaling pathway

Focal adhesion

Pathways in cancer

Renal cell carcinoma

Pancreatic cancer

Bladder cancer

220547_s_at -0.315 7.160 -2.711 1.594e-02 0.201 -3.148 FAM35A family with sequence similarity 35, member A 10 88844932 NM_019054 10q23.2 Hs.500419 6    
239917_at -0.601 5.620 -2.711 1.595e-02 0.201 -3.148 VPS8 vacuolar protein sorting 8 homolog (S. cerevisiae) 3 186012624 R07848 3q27.2 Hs.269263 6

protein binding

zinc ion binding

metal ion binding

 
212454_x_at -0.380 9.544 -2.711 1.595e-02 0.201 -3.148 HNRPDL heterogeneous nuclear ribonucleoprotein D-like 4 -83563370 AI762552 4q13-q21 Hs.527105 14

nucleotide binding

DNA binding

double-stranded DNA binding

single-stranded DNA binding

RNA binding

protein binding

nucleus

cytoplasm

RNA processing

poly(A) RNA binding

heterogeneous nuclear ribonucleoprotein complex

regulation of transcription

 
206055_s_at -0.467 7.515 -2.711 1.596e-02 0.201 -3.148 SNRPA1 small nuclear ribonucleoprotein polypeptide A' 15 -99639237 NM_003090 15q26.3 Hs.528763 22

nuclear mRNA splicing, via spliceosome

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

spliceosomal complex

U2 snRNP

RNA splicing

 
238105_x_at 0.240 6.363 2.710 1.598e-02 0.201 -3.150 WNT7B wingless-type MMTV integration site family, member 7B 22 -44694913 AW294903 22q13 Hs.512714 10

signal transducer activity

extracellular matrix structural constituent

extracellular region

proteinaceous extracellular matrix

Wnt receptor signaling pathway, calcium modulating pathway

cell-cell signaling

multicellular organismal development

organ morphogenesis

positive regulation of osteoblast differentiation

synapse organization

Wnt signaling pathway

Hedgehog signaling pathway

Melanogenesis

Pathways in cancer

Basal cell carcinoma

224824_at 0.529 7.843 2.709 1.600e-02 0.201 -3.151 FAM36A family with sequence similarity 36, member A 1 243065261 AV694386 1q44 Hs.715571 5

membrane

integral to membrane

 
205996_s_at -0.503 5.718 -2.709 1.601e-02 0.201 -3.151 AK2 adenylate kinase 2 1 -33251169, -33246172 NM_013411 1p34 Hs.470907 16

nucleotide binding

adenylate kinase activity

ATP binding

mitochondrion

mitochondrial intermembrane space

mitochondrial intermembrane space

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

transferase activity

nucleoside kinase activity

Purine metabolism

Metabolic pathways

1570279_at -0.244 3.296 -2.709 1.601e-02 0.201 -3.151 ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 9 -106583104 BC034824 9q31.1 Hs.719214 321

nucleotide binding

ATP binding

phospholipid binding

phospholipid transporter activity

membrane fraction

integral to plasma membrane

lipid metabolic process

transport

lysosome organization

G-protein coupled receptor protein signaling pathway

steroid metabolic process

cholesterol metabolic process

anion transmembrane transporter activity

negative regulation of foam cell differentiation

negative regulation of cholesterol storage

cholesterol binding

membrane

endosome transport

ATPase activity

cholesterol transporter activity

syntaxin-13 binding

positive regulation of cAMP biosynthetic process

small GTPase binding

intracellular cholesterol transport

Cdc42 protein signal transduction

cholesterol efflux

cholesterol efflux

phospholipid efflux

phospholipid efflux

apolipoprotein A-I receptor activity

high-density lipoprotein particle assembly

cholesterol homeostasis

reverse cholesterol transport

membrane raft

phagocytic vesicle

interleukin-1 beta secretion

phospholipid homeostasis

platelet dense granule organization

ABC transporters

227339_at -0.248 5.458 -2.709 1.602e-02 0.201 -3.152 RGMB RGM domain family, member B 5 98132898 BE206621 5q15 Hs.526902 5

ER-Golgi intermediate compartment

plasma membrane

cell adhesion

signal transduction

BMP signaling pathway

identical protein binding

positive regulation of transcription

anchored to plasma membrane

 
226233_at -0.474 8.307 -2.708 1.604e-02 0.201 -3.153 B3GALNT2 beta-1,3-N-acetylgalactosaminyltransferase 2 1 -233677155 BG112197 1q42.3 Hs.716571 5

Golgi apparatus

protein amino acid glycosylation

galactosyltransferase activity

membrane

integral to membrane

transferase activity, transferring glycosyl groups

 
227871_at -0.376 6.962 -2.708 1.605e-02 0.201 -3.154 CHM choroideremia (Rab escort protein 1) X -85110756, -85002840 AA878377 Xq21.2 Hs.496449 44

blood vessel development

Rab geranylgeranyltransferase activity

GTPase activator activity

protein binding

Rab-protein geranylgeranyltransferase complex

intracellular protein transport

visual perception

protein amino acid geranylgeranylation

regulation of GTPase activity

response to stimulus

 
203000_at 0.269 3.968 2.708 1.606e-02 0.201 -3.154 STMN2 stathmin-like 2 8 80685934 BF967657 8q21.13 Hs.521651 23

protein binding

membrane fraction

soluble fraction

cytoplasm

intracellular signaling cascade

membrane

neuron differentiation

axon

growth cone

cell projection

perinuclear region of cytoplasm

 
205298_s_at 0.262 5.974 2.707 1.608e-02 0.202 -3.155 BTN2A2 butyrophilin, subfamily 2, member A2 6 26491332 W58757 6p22.1 Hs.373938 8

membrane

integral to membrane

 
222827_s_at -1.063 11.393 -2.707 1.608e-02 0.202 -3.155 KBTBD10 kelch repeat and BTB (POZ) domain containing 10 2 170074457 AI126808 2q31.1 Hs.50550 8

ruffle

protein binding

nucleus

cytoplasm

cytoskeleton

plasma membrane

focal adhesion

striated muscle contraction

modification-dependent protein catabolic process

pseudopodium

 
201637_s_at -0.300 10.494 -2.707 1.608e-02 0.202 -3.155 FXR1 fragile X mental retardation, autosomal homolog 1 3 182113145 NM_005087 3q28 Hs.478407 30

RNA binding

nucleolus

cytoplasm

polysome

apoptosis

multicellular organismal development

muscle organ development

cell differentiation

 
226775_at -0.487 6.845 -2.706 1.610e-02 0.202 -3.157 ENY2 enhancer of yellow 2 homolog (Drosophila) 8 110415811 N30904 8q23.1 Hs.492555 5

SAGA complex

nucleus

transport

chromatin modification

histone deubiquitination

ligand-dependent nuclear receptor transcription coactivator activity

regulation of transcription

positive regulation of transcription, DNA-dependent

mRNA transport

 
226330_s_at -0.370 6.292 -2.705 1.613e-02 0.202 -3.158 FAM48A family with sequence similarity 48, member A 13 -36481450 BF739930 13q13.3 Hs.435815 14

protein binding

multicellular organismal development

gastrulation

 
41329_at -0.333 5.639 -2.705 1.613e-02 0.202 -3.158 SCYL3 SCY1-like 3 (S. cerevisiae) 1 -168088427 AI458463 1q24.2 Hs.435560 11

protein kinase activity

protein binding

ATP binding

cytoplasm

Golgi apparatus

protein amino acid phosphorylation

cell migration

lamellipodium

 
212632_at -0.343 6.683 -2.705 1.614e-02 0.202 -3.159 STX7 syntaxin 7 6 -132820355 N32035 6q23.1 Hs.593148 Hs.605992 31

SNAP receptor activity

endosome

Golgi apparatus

intracellular protein transport

post-Golgi vesicle-mediated transport

membrane

integral to membrane

vesicle-mediated transport

SNARE interactions in vesicular transport

227272_at -0.292 7.763 -2.705 1.614e-02 0.202 -3.159 C15orf52 chromosome 15 open reading frame 52 15 -38410944 BE673226 15q15.1 Hs.32433 3    
213701_at -0.400 6.912 -2.705 1.614e-02 0.202 -3.159 C12orf29 chromosome 12 open reading frame 29 12 86953398 AW299245 12q21.32 Hs.591009 6    
223263_s_at -1.002 3.932 -2.705 1.615e-02 0.202 -3.159 FGFR1OP2 FGFR1 oncogene partner 2 12 26982582 AF161472 12p11.23 Hs.591162 5

cytoplasm

 
213628_at -0.448 6.920 -2.705 1.615e-02 0.202 -3.159 CLCC1 chloride channel CLIC-like 1 1 -109273652 AA883493 1p13.3 Hs.658489 6

nucleus

endoplasmic reticulum

Golgi apparatus

membrane

integral to membrane

 
209868_s_at 0.330 7.283 2.705 1.615e-02 0.202 -3.159 RBMS1 RNA binding motif, single stranded interacting protein 1 2 -160836908 D28482 2q24.2 Hs.470412 12

DNA binding

double-stranded DNA binding

single-stranded DNA binding

RNA binding

cellular_component

nucleus

DNA replication

RNA processing

 
240754_at 0.207 3.334 2.704 1.617e-02 0.202 -3.160 LOC284933 hypothetical protein LOC284933 22   AI382197 22q13.32 Hs.159057 1    
226103_at -0.298 11.454 -2.704 1.617e-02 0.202 -3.160 NEXN nexilin (F actin binding protein) 1 78126787 AF114264 1p31.1 Hs.612385 6

cytoplasm

cytoskeleton

cell-substrate adherens junction

cell junction

regulation of cell migration

actin filament binding

regulation of cytoskeleton organization

 
1553185_at -0.482 9.804 -2.704 1.618e-02 0.202 -3.161 RASEF RAS and EF-hand domain containing 9 -84787136 NM_152573 9q21.32 Hs.657750 3

nucleotide binding

calcium ion binding

GTP binding

cytoplasm

small GTPase mediated signal transduction

protein transport

perinuclear region of cytoplasm

 
204566_at -0.403 5.770 -2.704 1.619e-02 0.202 -3.161 PPM1D protein phosphatase 1D magnesium-dependent, delta isoform 17 56032335 NM_003620 17q23.2 Hs.591184 37

magnesium ion binding

protein serine/threonine phosphatase activity

protein binding

nucleus

protein amino acid dephosphorylation

cell cycle

negative regulation of cell proliferation

protein serine/threonine phosphatase complex

response to radiation

hydrolase activity

manganese ion binding

p53 signaling pathway

210870_s_at -0.532 7.276 -2.703 1.620e-02 0.202 -3.162 EPM2A epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) 6 -145988132 BC005286 6q24 Hs.486696 37

protein serine/threonine phosphatase activity

protein serine/threonine phosphatase activity

protein tyrosine phosphatase activity

protein tyrosine phosphatase activity

protein binding

nucleus

cytoplasm

endoplasmic reticulum

cytosol

polysome

plasma membrane

carbohydrate metabolic process

glycogen metabolic process

protein amino acid dephosphorylation

protein tyrosine/serine/threonine phosphatase activity

hydrolase activity

carbohydrate binding

 
1568594_s_at 0.311 5.062 2.703 1.621e-02 0.202 -3.162 TRIM52 tripartite motif-containing 52 5 -180615991 AW965171 5q35.3 Hs.708154 3

protein binding

intracellular

zinc ion binding

metal ion binding

 
1552632_a_at 0.290 2.847 2.703 1.621e-02 0.202 -3.163 ARSG arylsulfatase G 17 63766917 BC012375 17q24.2 Hs.437249 8

arylsulfatase activity

arylsulfatase activity

dolichol kinase activity

calcium ion binding

endoplasmic reticulum

metabolic process

hydrolase activity

Lysosome

203328_x_at -0.296 6.198 -2.702 1.624e-02 0.203 -3.164 IDE insulin-degrading enzyme 10 -94203579 NM_004969 10q23-q25 Hs.500546 94

metalloendopeptidase activity

signal transducer activity

ATP binding

extracellular space

soluble fraction

cytoplasm

peroxisome

proteolysis

signal transduction

sex differentiation

peptidase activity

zinc ion binding

bradykinin catabolic process

protein homodimerization activity

metal ion binding

beta-amyloid metabolic process

Alzheimer's disease

210517_s_at 0.520 6.839 2.702 1.624e-02 0.203 -3.164 AKAP12 A kinase (PRKA) anchor protein 12 6 151602826, 151688358 AB003476 6q24-q25 Hs.371240 33

nucleus

cytoplasm

cytoskeleton

plasma membrane

cell cortex

protein targeting

signal transduction

G-protein coupled receptor protein signaling pathway

protein kinase A binding

 
216322_at -0.211 1.929 -2.702 1.624e-02 0.203 -3.164 CD58 CD58 molecule 1 -116862845, -116858679 D28586 1p13 Hs.34341 38

protein binding

plasma membrane

integral to plasma membrane

cell-cell adhesion

anchored to membrane

Cell adhesion molecules (CAMs)

1558249_s_at -0.450 5.476 -2.702 1.625e-02 0.203 -3.165 STX16 syntaxin 16 20 56659733, 56659733 BE878126 20q13.32 Hs.307913 14

SNAP receptor activity

cytoplasm

microsome

Golgi apparatus

intracellular protein transport

intra-Golgi vesicle-mediated transport

membrane

integral to membrane

vesicle-mediated transport

SNARE complex

retrograde transport, endosome to Golgi

SNARE interactions in vesicular transport

226969_at -0.257 8.004 -2.701 1.626e-02 0.203 -3.165 MTR 5-methyltetrahydrofolate-homocysteine methyltransferase 1 235025203 AV706396 1q43 Hs.498187 219

dihydropteroate synthase activity

protein binding

intracellular

cytoplasm

cytosol

nervous system development

methyltransferase activity

zinc ion binding

cellular amino acid biosynthetic process

methionine synthase activity

methionine synthase activity

homocysteine S-methyltransferase activity

methionine biosynthetic process

folic acid and derivative biosynthetic process

transferase activity

cobalamin binding

cellular metabolic process

metal ion binding

cobalt ion binding

Cysteine and methionine metabolism

One carbon pool by folate

Metabolic pathways

205614_x_at 0.241 6.119 2.701 1.628e-02 0.203 -3.166 MST1 macrophage stimulating 1 (hepatocyte growth factor-like) 3 -49696384 NM_020998 3p21 Hs.349110 Hs.512587 31

catalytic activity

serine-type endopeptidase activity

calcium ion binding

extracellular region

proteolysis

blood coagulation

biological_process

 
224591_at -0.309 9.480 -2.700 1.629e-02 0.203 -3.167 HP1BP3 heterochromatin protein 1, binding protein 3 1 -20941757 AK023129 1p36.12 Hs.142442 3

nucleosome

DNA binding

nucleus

chromosome

nucleosome assembly

 
212314_at 0.309 5.226 2.700 1.629e-02 0.203 -3.167 KIAA0746 KIAA0746 protein 4 -25358146 AB018289 4p15.2 Hs.479384 5

binding

membrane

integral to membrane

 
201744_s_at 1.053 8.136 2.700 1.630e-02 0.203 -3.168 LUM lumican 12 -90021362 NM_002345 12q21.3-q22 Hs.406475 41

extracellular matrix structural constituent

collagen binding

extracellular region

proteinaceous extracellular matrix

fibrillar collagen

visual perception

collagen fibril organization

 
227470_at 0.271 6.287 2.700 1.630e-02 0.203 -3.168 ZNF48 zinc finger protein 48 16 30314557 AI870369 16p11.2 Hs.513501 5

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
206145_at -0.226 2.310 -2.700 1.630e-02 0.203 -3.168 RHAG Rh-associated glycoprotein 6 -49680848 NM_000324 6p21.1-p11 Hs.120950 35

plasma membrane

plasma membrane

integral to plasma membrane

transport

cellular ion homeostasis

ammonium transmembrane transporter activity

ammonium transmembrane transporter activity

carbon dioxide transport

ammonium transport

ammonium transport

ankyrin binding

ammonia transporter activity

 
225050_at 0.335 6.934 2.700 1.631e-02 0.203 -3.168 ZNF512 zinc finger protein 512 2 27659396 N22677 2p23 Hs.529178 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
203089_s_at 0.249 6.857 2.700 1.631e-02 0.203 -3.168 HTRA2 HtrA serine peptidase 2 2 74610039 NM_013247 2p12 Hs.469045 Hs.716372 54

serine-type endopeptidase activity

nucleus

mitochondrion

mitochondrial intermembrane space

endoplasmic reticulum

endoplasmic reticulum membrane

proteolysis

apoptosis

response to stress

mitochondrion organization

adult walking behavior

peptidase activity

induction of apoptosis by intracellular signals

membrane

integral to membrane

forebrain development

regulation of multicellular organism growth

neuron development

unfolded protein binding

Parkinson's disease

200788_s_at 0.732 8.472 2.700 1.631e-02 0.203 -3.168 PEA15 phosphoprotein enriched in astrocytes 15 1 158441748 NM_003768 1q21.1 Hs.517216 37

protein binding

cytoplasm

microtubule associated complex

anti-apoptosis

carbohydrate transport

regulation of apoptosis

negative regulation of glucose import

 
214032_at 0.237 4.464 2.699 1.633e-02 0.203 -3.169 ZAP70 zeta-chain (TCR) associated protein kinase 70kDa 2 97696462, 97717300 AI817942 2q12 Hs.234569 168

nucleotide binding

non-membrane spanning protein tyrosine kinase activity

protein binding

ATP binding

cytoplasm

cytosol

protein amino acid phosphorylation

immune response

signal transduction

protein kinase cascade

transferase activity

T cell receptor complex

positive thymic T cell selection

positive regulation of T cell differentiation

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

Primary immunodeficiency

204055_s_at -0.832 6.349 -2.699 1.634e-02 0.203 -3.170 CTAGE5 CTAGE family, member 5 14 38804226, 38805252, 38806078 NM_005930 14q13.3 Hs.509200 Hs.540038 13

protein binding

enzyme activator activity

 
203356_at -0.534 6.737 -2.699 1.635e-02 0.203 -3.170 CAPN7 calpain 7 3 15222736 BE349584 3p24 Hs.631920 6

calcium-dependent cysteine-type endopeptidase activity

intracellular

nucleus

proteolysis

peptidase activity

cysteine-type peptidase activity

 
217367_s_at -0.254 5.554 -2.699 1.635e-02 0.203 -3.170 ZHX3 zinc fingers and homeoboxes 3 20 -39240502 AB007855 20q12 Hs.380133 13

transcription factor activity

protein binding

intracellular

nucleus

cytoplasm

zinc ion binding

sequence-specific DNA binding

negative regulation of transcription, DNA-dependent

metal ion binding

 
225365_at -0.323 5.561 -2.698 1.636e-02 0.203 -3.171 ZDHHC20 zinc finger, DHHC-type containing 20 13 -20848507 BG249221 13q12.11 Hs.564611 Hs.693749 4

zinc ion binding

acyltransferase activity

membrane

integral to membrane

transferase activity

metal ion binding

 
224857_s_at -0.287 7.320 -2.698 1.636e-02 0.203 -3.171 POLR1D polymerase (RNA) I polypeptide D, 16kDa 13 27094002, 27094028 BE378670 13q12.2 Hs.507584 15

DNA binding

DNA-directed RNA polymerase activity

nucleus

nucleoplasm

transcription

protein dimerization activity

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

230098_at -0.367 7.466 -2.698 1.637e-02 0.203 -3.171 PHF20L1 PHD finger protein 20-like 1 8 133856785, 133856785, 133856785 AW612407 8q24.22 Hs.304362 4

nucleic acid binding

protein binding

zinc ion binding

metal ion binding

 
225718_at -0.458 7.266 -2.698 1.637e-02 0.203 -3.171 KIAA1715 KIAA1715 2 -176498655 AL133768 2q31 Hs.209561 7

protein binding

multicellular organismal development

membrane

integral to membrane

limb development

 
213261_at 0.358 5.451 2.698 1.638e-02 0.203 -3.172 LBA1 lupus brain antigen 1 3 -36843314 AA035414 3p22.2 Hs.170999 3

binding

 
224731_at -0.314 9.773 -2.697 1.640e-02 0.203 -3.173 HMGB1 high-mobility group box 1 13 -29930878 BF673940 13q12 Hs.593339 Hs.596078 Hs.644368 157

condensed chromosome

nucleus

nucleolus

DNA unwinding during replication

DNA repair

base-excision repair, DNA ligation

DNA recombination

chromatin organization

regulation of transcription from RNA polymerase II promoter

anti-apoptosis

signal transduction

transcription factor binding

DNA bending activity

negative regulation of transcriptional preinitiation complex assembly

Base excision repair

229394_s_at -0.420 8.971 -2.697 1.640e-02 0.203 -3.173 GRLF1 glucocorticoid receptor DNA binding factor 1 19 52113772 AI275597 19q13.3 Hs.509447 26

DNA binding

transcription corepressor activity

GTPase activator activity

intracellular

nucleus

cytoplasm

signal transduction

negative regulation of transcription

Focal adhesion

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

227407_at -0.432 9.295 -2.697 1.640e-02 0.203 -3.173 TAPT1 transmembrane anterior posterior transformation 1 4 -15771225 AI341541 4p15.32 Hs.479223 5

receptor activity

multicellular organismal development

membrane

integral to membrane

 
239011_at 0.351 4.625 2.697 1.641e-02 0.203 -3.174 PRKCE protein kinase C, epsilon 2 45732546 AI247134 2p21 Hs.580351 178

nucleotide binding

protein kinase C activity

signal transducer activity

ATP binding

membrane fraction

protein amino acid phosphorylation

induction of apoptosis

intracellular signaling cascade

zinc ion binding

transferase activity

enzyme binding

diacylglycerol binding

metal ion binding

Vascular smooth muscle contraction

Tight junction

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Type II diabetes mellitus

244871_s_at -0.276 5.364 -2.697 1.641e-02 0.203 -3.174 USP32 ubiquitin specific peptidase 32 17 -55609472 AW268357 17q23.1-q23.2 Hs.132868 6

ubiquitin thiolesterase activity

calcium ion binding

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

membrane

 
201153_s_at -0.408 10.686 -2.697 1.642e-02 0.203 -3.174 MBNL1 muscleblind-like (Drosophila) 3 153468518, 153499883 NM_021038 3q25 Hs.478000 Hs.558914 21

in utero embryonic development

double-stranded RNA binding

nucleus

cytoplasm

nervous system development

muscle organ development

zinc ion binding

embryonic limb morphogenesis

myoblast differentiation

metal ion binding

 
1557430_at 0.373 3.019 2.696 1.642e-02 0.203 -3.174 LOC147670 hypothetical protein LOC147670 19   BG910569 19q13.43 Hs.336588 1    
225098_at 0.276 7.617 2.696 1.642e-02 0.203 -3.174 ABI2 abl-interactor 2 2 203901247 BF245400 2q33 Hs.471156 22

DNA binding

SH3/SH2 adaptor activity

cytoplasm

cytoplasm

cytosol

cytoskeleton

cell motion

cytoskeleton organization

cytoskeletal adaptor activity

actin polymerization or depolymerization

cell migration

SH3 domain binding

peptidyl-tyrosine phosphorylation

kinase binding

lamellipodium

filopodium

Regulation of actin cytoskeleton

203227_s_at -0.342 7.828 -2.696 1.643e-02 0.203 -3.175 TSPAN31 tetraspanin 31 12 56425050 NM_005981 12q13.3 Hs.632708 12

membrane fraction

integral to plasma membrane

positive regulation of cell proliferation

membrane

 
209259_s_at -0.455 7.092 -2.696 1.643e-02 0.203 -3.175 SMC3 structural maintenance of chromosomes 3 10 112317438 AF020043 10q25 Hs.24485 32

nucleotide binding

chromatin

lateral element

spindle pole

microtubule motor activity

ATP binding

basement membrane

nucleus

chromosome

cytoplasm

DNA repair

response to DNA damage stimulus

cell cycle

mitotic spindle organization

sister chromatid cohesion

mitosis

meiosis

signal transduction

cohesin complex

DNA mediated transformation

nuclear matrix

dynein binding

protein heterodimerization activity

cell division

Cell cycle

209895_at -0.845 5.951 -2.696 1.644e-02 0.203 -3.175 PTPN11 protein tyrosine phosphatase, non-receptor type 11 12 111340918 AF119855 12q24 Hs.506852 Hs.646231 326

non-membrane spanning protein tyrosine phosphatase activity

non-membrane spanning protein tyrosine phosphatase activity

protein binding

cytoplasm

cytosol

protein amino acid dephosphorylation

signal transduction

hydrolase activity

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Adipocytokine signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

Renal cell carcinoma

Chronic myeloid leukemia

212135_s_at 0.422 6.452 2.696 1.644e-02 0.203 -3.175 ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 1 201862550 AW517686 1q32.1 Hs.343522 49

nucleotide binding

magnesium ion binding

calcium-transporting ATPase activity

calcium ion binding

calmodulin binding

ATP binding

plasma membrane

integral to plasma membrane

ATP biosynthetic process

cation transport

calcium ion transport

metabolic process

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

Calcium signaling pathway

214102_at -0.420 5.927 -2.696 1.644e-02 0.203 -3.176 ARAP2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 4 -35744016 AK023737 4p14 Hs.479451 9

phosphatidylinositol-3,4,5-trisphosphate binding

intracellular

cytoplasm

signal transduction

ARF GTPase activator activity

zinc ion binding

regulation of ARF GTPase activity

metal ion binding

Endocytosis

218532_s_at -0.579 10.071 -2.696 1.645e-02 0.203 -3.176 FAM134B family with sequence similarity 134, member B 5 -16526146, -16526146 NM_019000 5p15.1 Hs.481704 4

membrane

integral to membrane

 
223196_s_at 0.527 5.855 2.696 1.645e-02 0.203 -3.176 SESN2 sestrin 2 1 28458592 AL136551 1p35.3 Hs.469543 8

nucleus

cytoplasm

cell cycle arrest

p53 signaling pathway

212887_at -0.403 8.919 -2.696 1.645e-02 0.203 -3.176 SEC23A Sec23 homolog A (S. cerevisiae) 14 -38570873 AI753659 14q21.1 Hs.272927 18

Golgi membrane

protein binding

endoplasmic reticulum

Golgi apparatus

cytosol

intracellular protein transport

ER to Golgi vesicle-mediated transport

ER to Golgi vesicle-mediated transport

zinc ion binding

membrane

membrane organization

vesicle-mediated transport

COPII vesicle coat

perinuclear region of cytoplasm

 
203622_s_at -0.449 7.314 -2.695 1.648e-02 0.203 -3.177 PNO1 partner of NOB1 homolog (S. cerevisiae) 2 68238508 NM_020143 2p14 Hs.262858 8

RNA binding

nucleus

nucleolus

 
218191_s_at -0.466 8.686 -2.695 1.649e-02 0.203 -3.178 LMBRD1 LMBR1 domain containing 1 6 -70442469 NM_018368 6q13 Hs.271643 9

lysosome

transport

membrane

integral to membrane

cobalamin binding

interspecies interaction between organisms

cobalt ion binding

 
218024_at 0.404 10.668 2.694 1.649e-02 0.203 -3.178 BRP44L brain protein 44-like 6 -166698399 NM_016098 6q27 Hs.172755 7

molecular_function

cellular_component

mitochondrion

biological_process

 
206174_s_at -0.392 7.891 -2.694 1.649e-02 0.203 -3.178 PPP6C protein phosphatase 6, catalytic subunit 9 -126948672 NM_002721 9q33.3 Hs.715605 16

G1/S transition of mitotic cell cycle

protein serine/threonine phosphatase activity

iron ion binding

protein binding

cytoplasm

cytosol

protein amino acid dephosphorylation

cell cycle

hydrolase activity

manganese ion binding

metal ion binding

 
1558118_at 0.342 4.994 2.694 1.652e-02 0.203 -3.180 DGCR5 DiGeorge syndrome critical region gene 5 (non-protein coding) 22 17338026 BU584635 22q11 Hs.646438 2    
1568865_at -0.363 4.725 -2.693 1.652e-02 0.203 -3.180 FNTB farnesyltransferase, CAAX box, beta 14 64523259 BC035148 14q23-q24 Hs.632345 26

farnesyltranstransferase activity

protein farnesyltransferase activity

protein binding

zinc ion binding

negative regulation of cell proliferation

transferase activity

protein amino acid farnesylation

wound healing

metal ion binding

positive regulation of fibroblast proliferation

 
202177_at 0.365 7.269 2.693 1.654e-02 0.204 -3.181 GAS6 growth arrest-specific 6 13 113546896, 113574925, 113577228 NM_000820 13q34 Hs.646346 45

receptor binding

calcium ion binding

extracellular region

signal transduction

cell proliferation

organ regeneration

regulation of growth

 
229476_s_at 0.759 6.260 2.692 1.656e-02 0.204 -3.182 THRSP thyroid hormone responsive (SPOT14 homolog, rat) 11 77452554 AW272342 11q13.5 Hs.591969 12

protein binding

nucleus

lipid metabolic process

 
212458_at 0.425 5.786 2.692 1.656e-02 0.204 -3.182 SPRED2 sprouty-related, EVH1 domain containing 2 2 -65391488, -65391488 H97931 2p14 Hs.59332 19

inactivation of MAPK activity

stem cell factor receptor binding

protein binding

cytoplasm

plasma membrane

multicellular organismal development

regulation of signal transduction

cytoplasmic vesicle

Jak-STAT signaling pathway

203281_s_at 0.237 5.558 2.692 1.659e-02 0.204 -3.183 UBA7 ubiquitin-like modifier activating enzyme 7 3 -49817641 NM_003335 3p21 Hs.16695 14

nucleotide binding

ATP binding

protein modification process

metabolic process

ligase activity

ISG15 activating enzyme activity

modification-dependent protein catabolic process

ISG15-protein conjugation

Ubiquitin mediated proteolysis

Parkinson's disease

204217_s_at -0.459 8.193 -2.691 1.662e-02 0.204 -3.185 RTN2 reticulon 2 19 -50680389, -50680389, -50680389 NM_005619 19q13.32 Hs.47517 10

signal transducer activity

endoplasmic reticulum

signal transduction

membrane

integral to membrane

integral to endoplasmic reticulum membrane

 
202396_at -0.403 8.091 -2.690 1.663e-02 0.204 -3.186 TCERG1 transcription elongation regulator 1 5 145807065 NM_006706 5q31 Hs.443465 23

RNA polymerase II transcription factor activity

transcription coactivator activity

protein binding

nucleus

transcription from RNA polymerase II promoter

regulation of transcription

 
223859_at 0.501 3.834 2.690 1.663e-02 0.204 -3.186 EPB41L4B erythrocyte membrane protein band 4.1 like 4B 9 -111041832, -110974074 AF153416 9q31-q32 Hs.591901 4

structural constituent of cytoskeleton

binding

cytoplasm

cytoskeleton

cytoskeletal protein binding

extrinsic to membrane

 
225044_at 0.304 7.299 2.690 1.663e-02 0.204 -3.186 NT5C3L 5'-nucleotidase, cytosolic III-like 17 -37234948 AL526783 17q21.2 Hs.237536 1

nucleotide binding

magnesium ion binding

cytoplasm

5'-nucleotidase activity

nucleotide metabolic process

transferase activity

hydrolase activity

 
208921_s_at 0.285 8.173 2.690 1.664e-02 0.204 -3.186 SRI sorcin 7 -87672367, -87672367 L12387 7q21.1 Hs.489040 28

regulation of action potential

receptor binding

calcium channel regulator activity

calcium ion binding

cytoplasm

transport

intracellular sequestering of iron ion

regulation of striated muscle contraction

signal transduction

heart development

muscle organ development

regulation of heart contraction

 
232180_at -0.868 6.639 -2.690 1.664e-02 0.204 -3.186 UGP2 UDP-glucose pyrophosphorylase 2 2 63921601, 63922517 U00954 2p14-p13 Hs.516217 9

UTP:glucose-1-phosphate uridylyltransferase activity

UTP:glucose-1-phosphate uridylyltransferase activity

protein binding

cytoplasm

cytosol

UDP-glucose metabolic process

metabolic process

phosphorylation

transferase activity

nucleotidyltransferase activity

Pentose and glucuronate interconversions

Galactose metabolism

Starch and sucrose metabolism

Amino sugar and nucleotide sugar metabolism

Metabolic pathways

225200_at -0.725 7.822 -2.690 1.664e-02 0.204 -3.186 DPH3 DPH3, KTI11 homolog (S. cerevisiae) 3 -16273572 AU151106 3p25.1 Hs.388087 8

protein binding

nucleus

cytoplasm

zinc ion binding

peptidyl-diphthamide biosynthetic process from peptidyl-histidine

metal ion binding

negative regulation of protein secretion

positive regulation of binding

 
209577_at 0.211 6.605 2.690 1.664e-02 0.204 -3.186 PCYT2 phosphate cytidylyltransferase 2, ethanolamine 17 -77455383, -2421678 BC000351 17q25.3 Hs.645248 8

ethanolamine-phosphate cytidylyltransferase activity

cellular_component

phospholipid biosynthetic process

biosynthetic process

transferase activity

nucleotidyltransferase activity

Aminophosphonate metabolism

Glycerophospholipid metabolism

Metabolic pathways

205656_at 0.277 5.810 2.690 1.665e-02 0.204 -3.187 PCDH17 protocadherin 17 13 57103789 NM_014459 13q21.1 Hs.106511 11

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

 
216760_at 0.359 4.730 2.689 1.666e-02 0.204 -3.188 HRASLS2 HRAS-like suppressor 2 11 -63076817 AK025029 11q12.3 Hs.272805 2    
231411_at 0.342 6.308 2.689 1.666e-02 0.204 -3.188 LHFP lipoma HMGIC fusion partner 13 -38815028 BE674089 13q12 Hs.507798 8

DNA binding

membrane

integral to membrane

 
212523_s_at 0.266 3.874 2.689 1.667e-02 0.204 -3.188 KIAA0146 KIAA0146 8 48336094 D63480 8q11.21 Hs.381058 6    
201829_at -0.346 6.941 -2.689 1.668e-02 0.204 -3.189 NET1 neuroepithelial cell transforming 1 10 5444517, 5478545 AW263232 10p15 Hs.25155 19

regulation of cell growth

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

cellular_component

intracellular

nucleus

cytoplasm

intracellular signaling cascade

regulation of Rho protein signal transduction

 
202218_s_at 0.325 6.107 2.688 1.669e-02 0.204 -3.189 FADS2 fatty acid desaturase 2 11 61352288 NM_004265 11q12-q13.1 Hs.502745 29

stearoyl-CoA 9-desaturase activity

membrane fraction

endoplasmic reticulum

integral to plasma membrane

unsaturated fatty acid biosynthetic process

transport

membrane

oxidoreductase activity

heme binding

electron transport chain

alpha-Linolenic acid metabolism

Biosynthesis of unsaturated fatty acids

PPAR signaling pathway

230427_s_at -0.521 4.173 -2.688 1.669e-02 0.204 -3.189 BAG5 BCL2-associated athanogene 5 14 -103092641, -103092641, -103092641 AW673909 14q32.33 Hs.5443 10

protein binding

protein folding

apoptosis

 
226506_at 0.254 6.669 2.688 1.670e-02 0.204 -3.190 THSD4 thrombospondin, type I, domain containing 4 15 69220841 AI742570 15q23 Hs.387057 6

metalloendopeptidase activity

extracellular region

proteinaceous extracellular matrix

peptidase activity

 
216137_s_at 0.215 5.817 2.688 1.670e-02 0.205 -3.190 MAPK8IP3 mitogen-activated protein kinase 8 interacting protein 3 16 1696221 AL031718 16p13.3 Hs.207763 23

Golgi membrane

MAP-kinase scaffold activity

cytoplasm

vesicle-mediated transport

kinesin binding

protein kinase binding

regulation of JNK cascade

MAPK signaling pathway

224883_at -0.508 6.155 -2.688 1.671e-02 0.205 -3.190 PLDN pallidin homolog (mouse) 15 43666708 AI344311 15q21.1 Hs.719102 17

cellular_component

cytoplasm

endosome

membrane fusion

blood coagulation

membrane

synaptic vesicle docking during exocytosis

melanocyte differentiation

syntaxin-13 binding

positive regulation of natural killer cell activation

secretion of lysosomal enzymes

identical protein binding

pigmentation

 
200814_at 0.566 9.031 2.687 1.672e-02 0.205 -3.191 PSME1 proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) 14 23675217 NM_006263 14q11.2 Hs.75348 56

proteasome complex

cytoplasm

cytosol

proteasome activator complex

proteasome activator activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

Antigen processing and presentation

203946_s_at 2.498 5.799 2.687 1.673e-02 0.205 -3.191 ARG2 arginase, type II 14 67156331 U75667 14q24.1-q24.3 Hs.708024 21

urea cycle

arginase activity

protein binding

mitochondrion

arginine metabolic process

striated muscle contraction

hydrolase activity

manganese ion binding

regulation of nitric oxide biosynthetic process

metal ion binding

nitric-oxide synthase binding

negative regulation of nitric-oxide synthase activity

Arginine and proline metabolism

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Metabolic pathways

1560609_at -0.286 3.329 -2.686 1.676e-02 0.205 -3.193 CRYZL1 crystallin, zeta (quinone reductase)-like 1 21 -33883517 BC022827 21q21.3 Hs.352671 9

NADPH:quinone reductase activity

binding

cytosol

zinc ion binding

oxidoreductase activity

quinone cofactor metabolic process

NADP or NADPH binding

oxidation reduction

 
209742_s_at 0.213 13.751 2.686 1.676e-02 0.205 -3.193 MYL2 myosin, light chain 2, regulatory, cardiac, slow 12 -109833006 AF020768 12q24.11 Hs.75535 34

motor activity

actin monomer binding

calcium ion binding

protein binding

regulation of striated muscle contraction

structural constituent of muscle

myosin complex

sarcomere

negative regulation of cell growth

myosin heavy chain binding

cardiac myofibril assembly

ventricular cardiac muscle morphogenesis

heart contraction

Focal adhesion

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Hypertrophic cardiomyopathy (HCM)

202878_s_at 0.489 8.426 2.686 1.676e-02 0.205 -3.193 CD93 CD93 molecule 20 -23007992 NM_012072 20p11.21 Hs.97199 35

complement component C1q binding

receptor activity

calcium ion binding

protein binding

sugar binding

plasma membrane

phagocytosis

cell surface

integral to membrane

cytoplasmic membrane-bounded vesicle

cell-cell adhesion

macrophage activation

interspecies interaction between organisms

 
211096_at 0.303 6.027 2.686 1.676e-02 0.205 -3.193 PBX2 pre-B-cell leukemia homeobox 2 6 -32260487, -3559697, -3367476 BC003111 6p21.3 Hs.509545 Hs.718462 18

chromatin binding

transcription factor activity

protein binding

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

proximal/distal pattern formation

embryonic limb morphogenesis

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

 
208832_at -0.254 6.761 -2.686 1.678e-02 0.205 -3.194 ATXN10 ataxin 10 22 44446350 AW241832 22q13.31 Hs.475125 25

protein binding

cytoplasm

nervous system development

cell death

dendrite

cell soma

perinuclear region of cytoplasm

 
1566916_at 0.224 2.978 2.685 1.680e-02 0.205 -3.195 HPYR1 Helicobacter pylori responsive 1 (non-protein coding) 8 -133641926 AF200341 8q24.22 Hs.545218 1    
230790_x_at -0.461 6.398 -2.685 1.681e-02 0.205 -3.196 FOXN3 forkhead box N3 14 -88692268, -88692268 AI589978 14q31.3 Hs.434286 Hs.621371 16

DNA damage checkpoint

G2 phase of mitotic cell cycle

transcription factor activity

nucleus

cell cycle

protein C-terminus binding

transcription repressor activity

sequence-specific DNA binding

negative regulation of transcription, DNA-dependent

 
218870_at 0.261 5.130 2.685 1.681e-02 0.205 -3.196 ARHGAP15 Rho GTPase activating protein 15 2 143603368 NM_018460 2q22.2-q22.3 Hs.171011 8

GTPase activator activity

intracellular

cytoplasm

signal transduction

membrane

 
222434_at -0.517 5.829 -2.684 1.682e-02 0.205 -3.196 ENAH enabled homolog (Drosophila) 1 -223741156 AI963713 1q42.12 Hs.497893 37

actin binding

cytoplasm

cytoskeleton

focal adhesion

SH3 domain binding

lamellipodium

cell junction

filopodium

synapse

intracellular transport

WW domain binding

Regulation of actin cytoskeleton

218298_s_at 0.322 8.438 2.684 1.683e-02 0.205 -3.196 C14orf159 chromosome 14 open reading frame 159 14 90650109, 90650731 NM_024952 14q32.11 Hs.309849 12

mitochondrion

 
231157_at -0.378 5.922 -2.684 1.684e-02 0.205 -3.197 TTLL11 tubulin tyrosine ligase-like family, member 11 9 -123791010, -123624025 BE856668 9q33.2 Hs.640663 Hs.644262 5

tubulin-tyrosine ligase activity

cilium

microtubule basal body

protein modification process

ligase activity

 
213419_at -1.140 5.224 -2.684 1.684e-02 0.205 -3.197 APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 4 -40506801 U62325 4p14-p13 Hs.479602 12

beta-amyloid binding

nucleus

cell cycle arrest

intracellular signaling cascade

transcription factor binding

membrane

lamellipodium

negative regulation of cell growth

growth cone

synapse

regulation of transcription

negative regulation of S phase of mitotic cell cycle

 
218471_s_at 0.253 6.786 2.684 1.685e-02 0.205 -3.198 BBS1 Bardet-Biedl syndrome 1 11 66034694 NM_024649 11q13.1 Hs.502915 22

microtubule cytoskeleton organization

retina homeostasis

protein binding

cytoplasm

plasma membrane

sensory perception of smell

photoreceptor cell morphogenesis

flagellum assembly

fertilization

dendrite development

striatum development

hippocampus development

cerebral cortex development

adult behavior

motile secondary cilium

BBSome

sensory cilium assembly

multicellular organism growth

olfactory behavior

hormone metabolic process

cellular lipid metabolic process

fat cell differentiation

photoreceptor cell maintenance

brain morphogenesis

response to stimulus

cilium membrane

cilium morphogenesis

regulation of cilium beat frequency involved in ciliary motility

 
225185_at -0.395 7.857 -2.684 1.686e-02 0.205 -3.198 MRAS muscle RAS oncogene homolog 3 139549314, 139550197 BF343625 3q22.3 Hs.527021 18

nucleotide binding

GTPase activity

GTP binding

intracellular

plasma membrane

Ras protein signal transduction

multicellular organismal development

muscle organ development

actin cytoskeleton organization

GTP-dependent protein binding

MAPK signaling pathway

Tight junction

Regulation of actin cytoskeleton

243894_at -0.208 2.730 -2.683 1.686e-02 0.205 -3.198 SLC41A2 solute carrier family 41, member 2 12 -103721404 BG169689 12q23.3 Hs.577463 6

magnesium ion binding

plasma membrane

cation transport

cation transmembrane transporter activity

integral to membrane

 
219607_s_at 0.961 3.226 2.683 1.686e-02 0.205 -3.198 MS4A4A membrane-spanning 4-domains, subfamily A, member 4 11 59804714, 59806661 NM_024021 11q12 Hs.325960 6

receptor activity

signal transduction

membrane

integral to membrane

 
221887_s_at 0.277 5.913 2.683 1.686e-02 0.205 -3.198 DFNB31 deafness, autosomal recessive 31 9 -116204180, -116204180 BE045998 9q32-q34 Hs.93836 13

retina homeostasis

protein binding

cytoplasm

visual perception

sensory perception of sound

growth cone

stereocilium

cell projection

response to stimulus

inner ear receptor stereocilium organization

 
222624_s_at -0.480 5.890 -2.683 1.687e-02 0.205 -3.199 ZNF639 zinc finger protein 639 3 180524244 AA224199 3q26.33 Hs.632578 5

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
203048_s_at -0.404 7.543 -2.683 1.688e-02 0.205 -3.199 TTC37 tetratricopeptide repeat domain 37 5 -94825877 BE566023 5q15 Hs.482868 4

binding

RNA degradation

202317_s_at -0.337 7.911 -2.682 1.690e-02 0.206 -3.200 UBE4B ubiquitination factor E4B (UFD2 homolog, yeast) 1 10015602 NM_006048 1p36.3 Hs.632370 17

ubiquitin ligase complex

cytoplasm

apoptosis

response to UV

enzyme binding

ubiquitin-ubiquitin ligase activity

protein ubiquitination during ubiquitin-dependent protein catabolic process

Ubiquitin mediated proteolysis

222661_at -0.314 7.006 -2.682 1.690e-02 0.206 -3.200 AGGF1 angiogenic factor with G patch and FHA domains 1 5 76361987 AA528017 5q13.3 Hs.634849 12

vasculogenesis

positive regulation of endothelial cell proliferation

nucleic acid binding

protein binding

extracellular region

intracellular

cytoplasm

RNA processing

cell adhesion

multicellular organismal development

eukaryotic cell surface binding

positive regulation of angiogenesis

perinuclear region of cytoplasm

 
1555421_at 0.215 2.075 2.682 1.690e-02 0.206 -3.200 AP1S3 adaptor-related protein complex 1, sigma 3 subunit 2 -224328290 BC009606 2q36.1 Hs.632555 13

protein binding

Golgi apparatus

cytosol

coated pit

intracellular protein transport

endocytosis

protein transporter activity

membrane

membrane coat

clathrin coat of trans-Golgi network vesicle

clathrin adaptor complex

cytoplasmic vesicle

Lysosome

211151_x_at 0.241 4.464 2.682 1.691e-02 0.206 -3.201 GH1 growth hormone 1 17 -59348294 AF185611 17q24.2 Hs.655229 227

positive regulation of receptor internalization

growth hormone receptor binding

prolactin receptor binding

protein binding

extracellular region

extracellular space

growth factor activity

positive regulation of activation of JAK2 kinase activity

positive regulation of phosphoinositide 3-kinase cascade

glucose transport

response to estradiol stimulus

positive regulation of multicellular organism growth

positive regulation of multicellular organism growth

positive regulation of tyrosine phosphorylation of Stat3 protein

positive regulation of tyrosine phosphorylation of Stat5 protein

positive regulation of MAP kinase activity

positive regulation of insulin-like growth factor receptor signaling pathway

positive regulation of JAK-STAT cascade

positive regulation of peptidyl-tyrosine phosphorylation

growth hormone receptor signaling pathway

growth hormone activity

Cytokine-cytokine receptor interaction

Neuroactive ligand-receptor interaction

Jak-STAT signaling pathway

201375_s_at -0.284 10.090 -2.682 1.691e-02 0.206 -3.201 PPP2CB protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform 8 -30762667 NM_004156 8p12 Hs.491440 40

protein phosphatase type 2A complex

chromosome, centromeric region

protein serine/threonine phosphatase activity

iron ion binding

protein binding

nucleus

cytoplasm

spindle

protein amino acid dephosphorylation

regulation of gene expression

hydrolase activity

manganese ion binding

response to hydrogen peroxide

negative regulation of apoptosis

proteasomal ubiquitin-dependent protein catabolic process

response to antibiotic

metal ion binding

Wnt signaling pathway

TGF-beta signaling pathway

Tight junction

Long-term depression

213068_at 0.766 7.169 2.682 1.692e-02 0.206 -3.201 DPT dermatopontin 1 -166931329 AI146848 1q12-q23 Hs.80552 13

protein binding

extracellular region

proteinaceous extracellular matrix

cell adhesion

negative regulation of cell proliferation

collagen fibril organization

 
203396_at -0.235 9.065 -2.681 1.693e-02 0.206 -3.202 PSMA4 proteasome (prosome, macropain) subunit, alpha type, 4 15 76619801 NM_002789 15q25.1 Hs.251531 47

threonine-type endopeptidase activity

nucleus

cytoplasm

cytosol

proteasome core complex

ubiquitin-dependent protein catabolic process

peptidase activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

identical protein binding

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

proteolysis involved in cellular protein catabolic process

Proteasome

201215_at 0.519 8.721 2.681 1.695e-02 0.206 -3.203 PLS3 plastin 3 (T isoform) X 114701461, 114734075 NM_005032 Xq23 Hs.496622 21

actin binding

calcium ion binding

protein binding

cytoplasm

actin filament organization

 
210740_s_at -0.261 7.516 -2.681 1.696e-02 0.206 -3.203 ITPK1 inositol 1,3,4-triphosphate 5/6 kinase 14 -92475821, -92473011 AF279372 14q31 Hs.308122 12

nucleotide binding

magnesium ion binding

ATP binding

intracellular

signal transduction

kinase activity

transferase activity

hydrolase activity

isomerase activity

inositol trisphosphate metabolic process

inositol-1,3,4-trisphosphate 5/6-kinase activity

inositol tetrakisphosphate 1-kinase activity

Inositol phosphate metabolism

Metabolic pathways

Phosphatidylinositol signaling system

232146_at 0.383 9.123 2.680 1.696e-02 0.206 -3.204 NDUFC1 NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa 4 -140430540 AK023115 4q28.2-q31.1 Hs.84549 8

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

transport

NADH dehydrogenase (ubiquinone) activity

membrane

integral to membrane

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

225216_at -0.326 7.241 -2.680 1.698e-02 0.206 -3.205 CXorf39 chromosome X open reading frame 39 X 103297956 AI590719 Xq22.2 Hs.496535 Hs.592223 5    
221383_at 0.287 5.422 2.680 1.699e-02 0.206 -3.205 NMUR1 neuromedin U receptor 1 2 -232096114 NM_006056 2q37.1 Hs.471619 10

neuromedin U receptor activity

neuromedin U receptor activity

receptor activity

G-protein coupled receptor activity

membrane fraction

plasma membrane

integral to plasma membrane

calcium ion transport

calcium ion transport

chloride transport

smooth muscle contraction

smooth muscle contraction

signal transduction

activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger

activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger

neuropeptide signaling pathway

transmission of nerve impulse

transmission of nerve impulse

calcium-mediated signaling

inositol phosphate-mediated signaling

Neuroactive ligand-receptor interaction

230404_at 0.243 4.668 2.679 1.700e-02 0.206 -3.206 FLJ44606 glutaredoxin-like protein YDR286C homolog 5   AI418538 5q23.2 Hs.49573 1

transport

electron transport chain

 
212056_at -0.337 6.990 -2.679 1.701e-02 0.206 -3.206 KIAA0182 KIAA0182 16 84202529, 84204424 D80004 16q24.1 Hs.461647 11

protein binding

 
228988_at 0.993 4.851 2.679 1.701e-02 0.206 -3.206 ZNF711 zinc finger protein 711 X 84385652 AU157017 Xq21.1-q21.2 Hs.326801 7

DNA binding

intracellular

nucleus

zinc ion binding

transcription regulator activity

regulation of transcription

metal ion binding

 
223037_at 0.402 7.586 2.679 1.702e-02 0.206 -3.207 PDZD11 PDZ domain containing 11 X -69422935 AF151061 Xq13.1 Hs.11042 12

protein binding

extracellular region

 
203526_s_at -0.577 4.157 -2.678 1.703e-02 0.206 -3.207 APC adenomatous polyposis coli 5 112071116, 112101454 M74088 5q21-q22 Hs.158932 386

cytokinesis after mitosis

kinetochore

kidney development

hair follicle development

nucleus

cytoplasm

centrosome

cytosol

cytoplasmic microtubule

protein complex assembly

response to DNA damage stimulus

negative regulation of microtubule depolymerization

cell cycle arrest

mitotic metaphase/anaphase transition

mitotic cell cycle spindle assembly checkpoint

axonogenesis

beta-catenin binding

microtubule binding

axis specification

anterior/posterior pattern formation

dorsal/ventral pattern formation

proximal/distal pattern formation

lateral plasma membrane

protein kinase regulator activity

protein kinase binding

negative regulation of Wnt receptor signaling pathway

positive regulation of cell migration

growth cone

positive regulation of epithelial cell differentiation

beta-catenin destruction complex

positive regulation of microtubule polymerization

cell projection membrane

positive regulation of pseudopodium assembly

T cell differentiation in the thymus

axon part

Axin-APC-beta-catenin-GSK3B complex

somatic stem cell maintenance

negative regulation of odontogenesis

cell projection

positive regulation of apoptosis

negative regulation of apoptosis

negative regulation of MAPKKK cascade

skin development

regulation of osteoblast differentiation

regulation of osteoclast differentiation

positive regulation of protein catabolic process

negative regulation of cyclin-dependent protein kinase activity

positive regulation of cell adhesion

muscle maintenance

thymus development

negative regulation of epithelial cell proliferation

regulation of nitrogen compound metabolic process

chromosome organization

regulation of cell cycle

positive regulation of cell division

regulation of attachment of spindle microtubules to kinetochore

retina development in camera-type eye

Wnt receptor signaling pathway through beta-catenin

Wnt receptor signaling pathway through beta-catenin

Wnt signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Colorectal cancer

Endometrial cancer

Basal cell carcinoma

227733_at 0.356 3.526 2.678 1.704e-02 0.206 -3.208 TMEM63C transmembrane protein 63C 14 76717854 AA928939 14q24.3 Hs.22452 3

membrane

integral to membrane

 
204986_s_at 0.294 5.359 2.677 1.708e-02 0.207 -3.210 TAOK2 TAO kinase 2 16 29892722, 29892722 NM_016151 16p11.2 Hs.291623 16

nucleotide binding

activation of MAPKK activity

magnesium ion binding

regulation of cell growth

protein serine/threonine kinase activity

ATP binding

protein targeting to membrane

apoptosis

response to stress

regulation of cell shape

membrane

integral to membrane

cytoplasmic membrane-bounded vesicle

cell migration

transferase activity

actin cytoskeleton organization

positive regulation of JNK cascade

focal adhesion formation

MAPK signaling pathway

218847_at -0.314 5.262 -2.677 1.709e-02 0.207 -3.211 IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 3 -186844220 NM_006548 3q27.2 Hs.35354 55

nucleotide binding

RNA binding

protein binding

nucleus

cytoplasm

biological_process

anatomical structure morphogenesis

negative regulation of translation

regulation of cytokine biosynthetic process

cytoskeletal part

translation regulator activity

mRNA 5'-UTR binding

 
230679_at -0.329 3.507 -2.676 1.710e-02 0.207 -3.211 DCAF10 DDB1 and CUL4 associated factor 10 9 37790789 AA976778 9p13.2 Hs.118394 2    
229030_at 0.297 3.947 2.676 1.710e-02 0.207 -3.211 CAPN8 calpain 8 1 -221781594 AW242997 1q41 Hs.291487 Hs.670199 9

calcium-dependent cysteine-type endopeptidase activity

calcium ion binding

intracellular

cytoplasm

Golgi apparatus

proteolysis

peptidase activity

 
237033_at -0.272 4.818 -2.676 1.712e-02 0.207 -3.212 FAM159A family with sequence similarity 159, member A 1 52871653 AI202832 1p32.3 Hs.424589 2

membrane

integral to membrane

 
203315_at -0.281 8.167 -2.676 1.712e-02 0.207 -3.212 NCK2 NCK adaptor protein 2 2 105727785, 105834736 BC000103 2q12 Hs.529244 Hs.707062 34

protein binding

cytoplasm

endoplasmic reticulum

regulation of translation

actin filament organization

signal transduction

signal complex assembly

epidermal growth factor receptor signaling pathway

regulation of epidermal growth factor receptor activity

cytoskeletal adaptor activity

negative regulation of cell proliferation

vesicle membrane

cell migration

lamellipodium assembly

receptor signaling complex scaffold activity

positive regulation of actin filament polymerization

positive regulation of T cell proliferation

T cell activation

ErbB signaling pathway

Axon guidance

T cell receptor signaling pathway

Pathogenic Escherichia coli infection - EHEC

202009_at -0.264 8.592 -2.676 1.713e-02 0.207 -3.212 TWF2 twinfilin, actin-binding protein, homolog 2 (Drosophila) 3 -52237665 NM_007284 3p21.1 Hs.436439 9

actin binding

protein binding

ATP binding

intracellular

cytoplasm

cytoskeleton

perinuclear region of cytoplasm

 
1563607_x_at -0.205 4.532 -2.675 1.713e-02 0.207 -3.213 hCG_2045089 hypothetical LOC286359 9 -99192941 AL833510 9q22.33 Hs.132262 2    
201539_s_at -0.834 11.817 -2.675 1.713e-02 0.207 -3.213 FHL1 four and a half LIM domains 1 X 135056526, 135057224, 135058402, 135079120, 135079731, 135106578, 135106720 U29538 Xq26 Hs.435369 38

molecular_function

cellular_component

nucleus

cytoplasm

cytosol

multicellular organismal development

muscle organ development

zinc ion binding

organ morphogenesis

cell growth

cell differentiation

metal ion binding

 
204396_s_at 0.237 6.649 2.675 1.714e-02 0.207 -3.213 GRK5 G protein-coupled receptor kinase 5 10 120957186 NM_005308 10q24-qter Hs.524625 38

nucleotide binding

G-protein coupled receptor kinase activity

signal transducer activity

protein kinase C binding

protein binding

ATP binding

phospholipid binding

soluble fraction

cytoplasm

plasma membrane

protein amino acid phosphorylation

signal transduction

G-protein signaling, coupled to cAMP nucleotide second messenger

tachykinin receptor signaling pathway

regulation of G-protein coupled receptor protein signaling pathway

transferase activity

Chemokine signaling pathway

Endocytosis

241646_s_at 0.240 5.219 2.675 1.715e-02 0.207 -3.213 BCAP29 B-cell receptor-associated protein 29 7 107007657, 107008439 AW470942 7q22-q31 Hs.303787 12

endoplasmic reticulum

intracellular protein transport

apoptosis

membrane

integral to membrane

vesicle-mediated transport

 
204336_s_at 0.319 5.732 2.675 1.715e-02 0.207 -3.214 RGS19 regulator of G-protein signaling 19 20 -62174978, -62174978 NM_005873 20q13.33 Hs.422336 25

signal transducer activity

protein binding

membrane fraction

Golgi apparatus

heterotrimeric G-protein complex

autophagy

G-protein coupled receptor protein signaling pathway

small GTPase mediated signal transduction

negative regulation of signal transduction

membrane

 
202309_at 0.286 8.723 2.675 1.715e-02 0.207 -3.214 MTHFD1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase 14 63924511 NM_005956 14q24 Hs.652308 68

histidine biosynthetic process

nucleotide binding

formate-tetrahydrofolate ligase activity

methenyltetrahydrofolate cyclohydrolase activity

methylenetetrahydrofolate dehydrogenase (NADP+) activity

protein binding

ATP binding

cytoplasm

mitochondrion

purine nucleotide biosynthetic process

histidine catabolic process

one-carbon metabolic process

cellular amino acid biosynthetic process

methionine biosynthetic process

folic acid and derivative biosynthetic process

formyltetrahydrofolate dehydrogenase activity

oxidoreductase activity

hydrolase activity

ligase activity

oxidation reduction

Glyoxylate and dicarboxylate metabolism

One carbon pool by folate

Metabolic pathways

202984_s_at -0.330 6.697 -2.675 1.716e-02 0.207 -3.214 BAG5 BCL2-associated athanogene 5 14 -103092641, -103092641, -103092641 AA457021 14q32.33 Hs.5443 10

protein binding

protein folding

apoptosis

 
205791_x_at 0.383 3.442 2.674 1.717e-02 0.207 -3.215 ZNF230 zinc finger protein 230 19 49198916 NM_006300 19q13.31 Hs.193583 10

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1552757_s_at 0.272 3.331 2.674 1.717e-02 0.207 -3.215 C9orf66 chromosome 9 open reading frame 66 9 -203107 AI478419 9p24.3 Hs.190877 3    
207814_at 0.205 5.797 2.674 1.718e-02 0.207 -3.215 DEFA6 defensin, alpha 6, Paneth cell-specific 8 -6769628 NM_001926 8pter-p21 Hs.711 10

extracellular region

extracellular space

xenobiotic metabolic process

defense response to bacterium

defense response to fungus

 
200060_s_at -0.254 9.425 -2.674 1.718e-02 0.207 -3.215 RNPS1 RNA binding protein S1, serine-rich domain 16 -2243122, -2243122 BC001659 16p13.3 Hs.355643 30

nucleotide binding

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

cytoplasm

transcription

RNA splicing

nuclear speck

 
210309_at -0.213 4.443 -2.674 1.718e-02 0.207 -3.216 RECQL5 RecQ protein-like 5 17 -71158037, -71156539, -71134544 AB042823 17q25.2-q25.3 Hs.632229 13

nucleotide binding

nucleic acid binding

DNA helicase activity

ATP binding

nucleus

nucleoplasm

cytoplasm

DNA repair

DNA recombination

ATP-dependent helicase activity

hydrolase activity

 
218543_s_at 0.313 5.664 2.674 1.719e-02 0.207 -3.216 PARP12 poly (ADP-ribose) polymerase family, member 12 7 -139370017 NM_022750 7q34 Hs.12646 8

nucleic acid binding

NAD+ ADP-ribosyltransferase activity

nucleus

zinc ion binding

transferase activity

metal ion binding

 
242157_at 0.483 4.464 2.674 1.719e-02 0.207 -3.216 CHD9 chromodomain helicase DNA binding protein 9 16 51646445 AW469037 16q12.2 Hs.59159 Hs.622347 10

nucleotide binding

chromatin

DNA binding

chromatin binding

helicase activity

protein binding

ATP binding

nucleus

cytoplasm

chromatin assembly or disassembly

chromatin modification

hydrolase activity

regulation of transcription

 
213174_at -0.327 6.200 -2.674 1.720e-02 0.207 -3.216 TTC9 tetratricopeptide repeat domain 9 14 70178256 BE675549 14q24.2 Hs.79170 5

binding

protein folding

 
1554958_at -0.299 4.625 -2.673 1.720e-02 0.207 -3.216 ZNF641 zinc finger protein 641 12 -47022178 BC018090 12q13.11 Hs.23492 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
201893_x_at 0.517 11.084 2.673 1.720e-02 0.207 -3.216 DCN decorin 12 -90063165, -90063165, -90063165 AF138300 12q21.33 Hs.718429 104

protein binding

glycosaminoglycan binding

extracellular region

proteinaceous extracellular matrix

organ morphogenesis

peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan

extracellular matrix binding

TGF-beta signaling pathway

228312_at 0.274 6.222 2.673 1.722e-02 0.207 -3.217 PI16 peptidase inhibitor 16 6 37030186 AI524085 6p21.2 Hs.25391 5

extracellular region

membrane

integral to membrane

peptidase inhibitor activity

 
227721_at 0.274 4.804 2.673 1.723e-02 0.207 -3.218 CPAMD8 C3 and PZP-like, alpha-2-macroglobulin domain containing 8 19 -16864761 AB033109 19p13.11 Hs.631644 8

serine-type endopeptidase inhibitor activity

protein binding

extracellular region

extracellular space

membrane

 
202607_at 0.260 6.590 2.672 1.723e-02 0.207 -3.218 NDST1 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 5 149867866 AL526632 5q33.1 Hs.222055 13

Golgi apparatus

inflammatory response

sulfotransferase activity

heparan sulfate proteoglycan biosynthetic process

[heparan sulfate]-glucosamine N-sulfotransferase activity

membrane

integral to membrane

transferase activity

hydrolase activity

Heparan sulfate biosynthesis

Metabolic pathways

210624_s_at 0.503 6.565 2.672 1.726e-02 0.207 -3.220 ILVBL ilvB (bacterial acetolactate synthase)-like 19 -15086784 BC000109 19p13.1 Hs.78880 3

magnesium ion binding

cellular_component

biological_process

membrane

integral to membrane

transferase activity

thiamin pyrophosphate binding

 
231725_at 0.275 3.474 2.671 1.729e-02 0.208 -3.221 PCDHB2 protocadherin beta 2 5 140454420 NM_018936 5q31 Hs.533023 10

calcium ion binding

protein binding

plasma membrane

integral to plasma membrane

cell adhesion

homophilic cell adhesion

synaptic transmission

synaptogenesis

calcium-dependent cell-cell adhesion

 
214399_s_at 0.233 4.617 2.671 1.730e-02 0.208 -3.222 KRT4 keratin 4 12 -51486599 BF588953 12q12-q13 Hs.654610 19

structural molecule activity

cytoskeleton organization

epithelial cell differentiation

keratin filament

negative regulation of epithelial cell proliferation

 
214279_s_at -1.037 9.481 -2.670 1.730e-02 0.208 -3.222 NDRG2 NDRG family member 2 14 -20554761, -20554761 W74452 14q11.2 Hs.525205 42

molecular_function

nucleus

cytoplasm

Golgi apparatus

centrosome

cytosol

multicellular organismal development

nervous system development

cell differentiation

perinuclear region of cytoplasm

 
244043_at -0.250 5.037 -2.670 1.732e-02 0.208 -3.222 TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) 3 -143154017 AI049624 3q23 Hs.379018 14

transcription factor activity

transcription cofactor activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

cell cycle

protein domain specific binding

Cell cycle

218664_at 0.362 7.982 2.670 1.732e-02 0.208 -3.223 MECR mitochondrial trans-2-enoyl-CoA reductase 1 -29391971 NM_016011 1p36.1-p35.1 Hs.183646 10

binding

mitochondrion

fatty acid biosynthetic process

zinc ion binding

oxidoreductase activity

trans-2-enoyl-CoA reductase (NADPH) activity

oxidation reduction

Fatty acid elongation in mitochondria

Metabolic pathways

232422_at 0.377 5.022 2.670 1.732e-02 0.208 -3.223 A2LD1 AIG2-like domain 1 13 -99981810 BC001077 13q32.3 Hs.350868 2    
224817_at 0.345 8.160 2.670 1.733e-02 0.208 -3.223 SH3PXD2A SH3 and PX domains 2A 10 -105343773 W93554 10q24.33 Hs.594708 10

podosome

protein binding

cytoplasm

cell communication

phosphoinositide binding

cell projection

 
224448_s_at 0.607 9.763 2.670 1.733e-02 0.208 -3.223 C6orf125 chromosome 6 open reading frame 125 6 -33773323 BC006007 6p21.31 Hs.93235 3    
224336_s_at -0.324 5.069 -2.669 1.734e-02 0.208 -3.224 DUSP16 dual specificity phosphatase 16 12 -12520097 AB052156 12p13 Hs.536535 12

inactivation of MAPK activity

protein tyrosine phosphatase activity

protein binding

nucleus

cytoplasm

protein amino acid dephosphorylation

hydrolase activity

MAP kinase tyrosine/serine/threonine phosphatase activity

MAPK export from nucleus

MAPK phosphatase export from nucleus, leptomycin B sensitive

MAPK signaling pathway

224869_s_at 0.226 8.640 2.669 1.735e-02 0.208 -3.224 MRPS25 mitochondrial ribosomal protein S25 3 -15065022 AW341440 3p25 Hs.715617 9

structural constituent of ribosome

protein binding

mitochondrion

mitochondrial small ribosomal subunit

ribosome

translation

 
213081_at 0.236 5.685 2.668 1.737e-02 0.208 -3.225 ZBTB22 zinc finger and BTB domain containing 22 6 -33390160, -33390160, -4662321, -4662321, -4468375, -4468375 AL523144 6p21.3 Hs.206770 9

DNA binding

retinoid-X receptor activity

protein binding

intracellular

nucleus

zinc ion binding

thyroid hormone receptor coactivator activity

vitamin D receptor binding

retinoic acid receptor binding

regulation of transcription

metal ion binding

thyroid hormone receptor binding

protein heterodimerization activity

 
217857_s_at -0.305 6.586 -2.668 1.738e-02 0.208 -3.226 RBM8A RNA binding motif protein 8A 1 144218994 NM_005105 1q12 Hs.356873 43

nucleotide binding

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

nuclear mRNA splicing, via spliceosome

mRNA binding

protein binding

nucleus

spliceosomal complex

cytoplasm

transport

biological_process

RNA splicing

nuclear speck

exon-exon junction complex

mRNA transport

 
1557120_at 0.562 5.319 2.668 1.738e-02 0.208 -3.226 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 6 -74282193 BE622780 6q14.1 Hs.520703 Hs.586423 Hs.644639 Hs.697944 Hs.708256 Hs.713109 86

nucleotide binding

translation elongation factor activity

GTPase activity

protein binding

GTP binding

cytoplasm

cytosol

eukaryotic translation elongation factor 1 complex

translational elongation

translational elongation

 
226943_at -0.291 8.425 -2.668 1.739e-02 0.208 -3.226 C12orf73 chromosome 12 open reading frame 73 12 -102868110 AA287457 12q23.3 Hs.42547 2

extracellular region

 
202291_s_at 0.833 8.394 2.668 1.739e-02 0.208 -3.226 MGP matrix Gla protein 12 -14926093 NM_000900 12p13.1-p12.3 Hs.365706 45

cartilage condensation

ossification

extracellular matrix structural constituent

calcium ion binding

extracellular region

proteinaceous extracellular matrix

extracellular space

endoplasmic reticulum

multicellular organismal development

response to nutrient

structural constituent of bone

response to mechanical stimulus

response to hormone stimulus

cell differentiation

lung development

regulation of bone mineralization

protein complex

calcium-dependent protein binding

response to calcium ion

 
209014_at 0.416 8.529 2.668 1.740e-02 0.208 -3.227 MAGED1 melanoma antigen family D, 1 X 51562894, 51653437 AF217963 Xp11.23 Hs.5258 29

transcription coactivator activity

cytoplasm

plasma membrane

regulation of transcription from RNA polymerase II promoter

identical protein binding

regulation of apoptosis

protein complex

negative regulation of epithelial cell proliferation

Neurotrophin signaling pathway

206828_at 0.217 2.635 2.668 1.740e-02 0.208 -3.227 TXK TXK tyrosine kinase 4 -47763166 NM_003328 4p12 Hs.479669 16

nucleotide binding

non-membrane spanning protein tyrosine kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

transferase activity

Leukocyte transendothelial migration

226561_at -0.454 5.722 -2.667 1.741e-02 0.208 -3.227 AGFG1 ArfGAP with FG repeats 1 2 228045131 BE551849 2q36.3 Hs.352962 29

DNA binding

RNA binding

protein binding

nucleus

nuclear pore

Golgi apparatus

mRNA export from nucleus

transport

multicellular organismal development

spermatogenesis

ARF GTPase activator activity

zinc ion binding

cell differentiation

cytoplasmic vesicle

regulation of ARF GTPase activity

metal ion binding

 
213890_x_at -0.343 12.550 -2.667 1.744e-02 0.208 -3.229 RPS16 ribosomal protein S16 19 -44615686 AI200589 19q13.1 Hs.397609 24

RNA binding

structural constituent of ribosome

protein binding

intracellular

cytosol

ribosome

rRNA processing

translational elongation

cytosolic small ribosomal subunit

cytosolic small ribosomal subunit

ribosomal small subunit biogenesis

Ribosome

202221_s_at -0.442 6.219 -2.667 1.744e-02 0.208 -3.229 EP300 E1A binding protein p300 22 39818559 AV727101 22q13.2 Hs.517517 338

histone acetyltransferase complex

response to hypoxia

somitogenesis

transcription factor activity

transcription coactivator activity

histone acetyltransferase activity

nucleus

transcription factor complex

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

apoptosis

cell cycle

signal transduction

nervous system development

heart development

skeletal muscle tissue development

protein C-terminus binding

zinc ion binding

organ morphogenesis

acetyltransferase activity

histone acetylation

transferase activity

N-terminal peptidyl-lysine acetylation

lung development

homeostatic process

peroxisome proliferator activated receptor binding

interspecies interaction between organisms

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

positive regulation of transcription factor activity

Cell cycle

Wnt signaling pathway

Notch signaling pathway

TGF-beta signaling pathway

Adherens junction

Jak-STAT signaling pathway

Long-term potentiation

Melanogenesis

Huntington's disease

Pathways in cancer

Renal cell carcinoma

Prostate cancer

208890_s_at 0.441 5.185 2.666 1.745e-02 0.208 -3.229 PLXNB2 plexin B2 22 -49055534 BC004542 22q13.33 Hs.3989 17

receptor activity

protein binding

intracellular

signal transduction

multicellular organismal development

membrane

integral to membrane

positive regulation of axonogenesis

Axon guidance

209094_at -0.808 9.209 -2.666 1.745e-02 0.208 -3.229 DDAH1 dimethylarginine dimethylaminohydrolase 1 1 -85556756, -85556756 AL078459 1p22 Hs.379858 22

cytoplasm

arginine catabolic process

nitric oxide mediated signal transduction

zinc ion binding

dimethylargininase activity

hydrolase activity

metal ion binding

 
216092_s_at -0.293 6.908 -2.666 1.747e-02 0.209 -3.230 SLC7A8 solute carrier family 7 (cationic amino acid transporter, y+ system), member 8 14 -22664343, -22664343 AL365347 14q11.2 Hs.632348 14

protein binding

cytoplasm

plasma membrane

integral to plasma membrane

cellular amino acid metabolic process

transport

response to toxin

organic cation transmembrane transporter activity

neutral amino acid transmembrane transporter activity

L-amino acid transmembrane transporter activity

neutral amino acid transport

L-amino acid transport

toxin transporter activity

peptide antigen binding

metal ion homeostasis

 
203885_at -0.426 8.739 -2.666 1.748e-02 0.209 -3.231 RAB21 RAB21, member RAS oncogene family 12 70434924 NM_014999 12q21.1 Hs.524590 12

Golgi membrane

nucleotide binding

protein binding

GTP binding

endosome

endoplasmic reticulum

Golgi apparatus

small GTPase mediated signal transduction

protein transport

membrane

cytoplasmic vesicle membrane

cytoplasmic vesicle

early endosome membrane

 
203376_at -0.232 7.567 -2.665 1.750e-02 0.209 -3.232 CDC40 cell division cycle 40 homolog (S. cerevisiae) 6 110608316 BG528818 6q21 Hs.428147 18

nuclear mRNA splicing, via spliceosome

nucleus

spliceosomal complex

RNA splicing

 
207615_s_at 0.226 4.221 2.665 1.751e-02 0.209 -3.232 C16orf3 chromosome 16 open reading frame 3 16 -88622816 NM_001214 16q24.3 Hs.633032 3

molecular_function

cellular_component

biological_process

 
223520_s_at 0.271 3.710 2.665 1.751e-02 0.209 -3.232 KIF13A kinesin family member 13A 6 -17871902, -17868563 AY014403 6p23 Hs.189915 14

nucleotide binding

microtubule motor activity

protein binding

ATP binding

microtubule

microtubule-based movement

protein transport

 
204345_at 0.440 5.771 2.664 1.751e-02 0.209 -3.233 COL16A1 collagen, type XVI, alpha 1 1 -31890434 NM_001856 1p35-p34 Hs.368921 11

integrin binding

structural molecule activity

protein binding

extracellular region

proteinaceous extracellular matrix

collagen type XVI

cell adhesion

integrin-mediated signaling pathway

female pregnancy

 
218517_at -0.274 7.224 -2.664 1.753e-02 0.209 -3.233 PHF17 PHD finger protein 17 4 129950228, 129950228 NM_024900 4q26-q27 Hs.12420 14

histone acetyltransferase complex

protein binding

nucleus

cytoplasm

apoptosis

response to stress

zinc ion binding

negative regulation of cell growth

histone H3 acetylation

histone H4-K5 acetylation

histone H4-K8 acetylation

histone H4-K12 acetylation

histone H4-K16 acetylation

regulation of transcription

metal ion binding

 
218905_at -0.397 7.489 -2.664 1.754e-02 0.209 -3.234 INTS8 integrator complex subunit 8 8 95904709 NM_017864 8q22.1 Hs.521693 8

protein binding

nucleus

snRNA processing

integrator complex

 
225783_at -0.354 8.452 -2.664 1.754e-02 0.209 -3.234 UBE2F ubiquitin-conjugating enzyme E2F (putative) 2 238540438 BF675985 2q37.3 Hs.471785 4

nucleotide binding

protein binding

ATP binding

ligase activity

NEDD8 ligase activity

modification-dependent protein catabolic process

protein neddylation

regulation of protein metabolic process

Ubiquitin mediated proteolysis

227443_at 0.335 5.686 2.663 1.755e-02 0.209 -3.235 C9orf150 chromosome 9 open reading frame 150 9 12765011 AI972386 9p23 Hs.445356 6    
214820_at -0.573 4.955 -2.663 1.756e-02 0.209 -3.235 BRWD1 bromodomain and WD repeat domain containing 1 21 -39590234, -39484017, -39479273 AJ002572 21q22.2 Hs.654740 8

protein binding

nucleus

cytoplasm

regulation of transcription from RNA polymerase II promoter

biological_process

transcription regulator activity

regulation of transcription

 
204779_s_at 0.375 4.610 2.663 1.756e-02 0.209 -3.235 HOXB7 homeobox B7 17 -44039593 NM_004502 17q21.3 Hs.436181 39

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anterior/posterior pattern formation

myeloid cell differentiation

sequence-specific DNA binding

embryonic skeletal system morphogenesis

 
226750_at -0.471 6.597 -2.663 1.757e-02 0.209 -3.235 LARP1B La ribonucleoprotein domain family, member 1B 4 129201952, 129201952, 129201952 AI767732 4q28.2 Hs.657067 3

RNA binding

 
218315_s_at -0.328 7.100 -2.661 1.762e-02 0.210 -3.238 CDK5RAP1 CDK5 regulatory subunit associated protein 1 20 -31410305 NM_016408 20pter-q11.23 Hs.435952 13

catalytic activity

iron ion binding

protein binding

cellular_component

brain development

neuronal Cdc2-like kinase binding

regulation of neuron differentiation

negative regulation of cyclin-dependent protein kinase activity

metal ion binding

4 iron, 4 sulfur cluster binding

 
222882_s_at 0.212 5.367 2.661 1.762e-02 0.210 -3.238 C17orf59 chromosome 17 open reading frame 59 17 -8032375 AI992271 17p13.1 Hs.129563 3

protein binding

 
209156_s_at 0.499 6.596 2.661 1.763e-02 0.210 -3.238 COL6A2 collagen, type VI, alpha 2 21 46342460, 46342460 AY029208 21q22.3 Hs.420269 37

extracellular matrix structural constituent

extracellular region

proteinaceous extracellular matrix

membrane

cell-cell adhesion

extracellular matrix organization

protein binding, bridging

sarcolemma

Focal adhesion

ECM-receptor interaction

213260_at 0.251 6.273 2.661 1.764e-02 0.210 -3.239 FOXC1 forkhead box C1 6 1555679 AU145890 6p25 Hs.348883 51

skeletal system development

ossification

ovarian follicle development

blood vessel development

ureteric bud development

in utero embryonic development

kidney development

lymph vessel development

blood vessel remodeling

heart morphogenesis

RNA polymerase II transcription factor activity, enhancer binding

nucleus

nucleus

nuclear heterochromatin

anti-apoptosis

Notch signaling pathway

brain development

transcription factor binding

DNA bending activity

germ cell migration

neural crest cell development

transcription activator activity

collagen fibril organization

glycosaminoglycan metabolic process

lacrimal gland development

embryonic heart tube development

odontogenesis of dentine-containing tooth

camera-type eye development

sequence-specific DNA binding

negative regulation of mitotic cell cycle

positive regulation of transcription from RNA polymerase II promoter

regulation of organ growth

vascular endothelial growth factor receptor signaling pathway

paraxial mesoderm formation

mesenchymal cell differentiation

artery morphogenesis

regulation of blood vessel size

ventricular cardiac muscle morphogenesis

cardiac muscle cell proliferation

 
204104_at 0.278 5.541 2.661 1.764e-02 0.210 -3.239 SNAPC2 small nuclear RNA activating complex, polypeptide 2, 45kDa 19 7891228 NM_003083 19p13.3-p13.2 Hs.631860 12

transcription factor activity

nucleus

transcription from RNA polymerase II promoter

transcription from RNA polymerase III promoter

snRNA transcription

regulation of transcription

 
214113_s_at -0.396 7.575 -2.661 1.765e-02 0.210 -3.239 RBM8A RNA binding motif protein 8A 1 144218994 AI738479 1q12 Hs.356873 43

nucleotide binding

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

nuclear mRNA splicing, via spliceosome

mRNA binding

protein binding

nucleus

spliceosomal complex

cytoplasm

transport

biological_process

RNA splicing

nuclear speck

exon-exon junction complex

mRNA transport

 
216294_s_at -0.334 4.775 -2.661 1.765e-02 0.210 -3.240 KIAA1109 KIAA1109 4 123311207 AL137254 4q27 Hs.408142 12

membrane

integral to membrane

 
209666_s_at -0.560 6.313 -2.660 1.768e-02 0.210 -3.241 CHUK conserved helix-loop-helix ubiquitous kinase 10 -101938113 AF080157 10q24-q25 Hs.198998 154

nucleotide binding

morphogenesis of an epithelial sheet

ATP binding

nucleus

cytoplasm

cytosol

immune response

I-kappaB phosphorylation

IkappaB kinase activity

anatomical structure morphogenesis

transferase activity

osteoclast differentiation

odontogenesis of dentine-containing tooth

identical protein binding

MAPK signaling pathway

Chemokine signaling pathway

Apoptosis

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

T cell receptor signaling pathway

B cell receptor signaling pathway

Adipocytokine signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Pancreatic cancer

Prostate cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Small cell lung cancer

1557100_s_at -0.591 6.355 -2.659 1.769e-02 0.210 -3.242 HECTD1 HECT domain containing 1 14 -30639074 AL038005 14q12 Hs.708017 7

ubiquitin-protein ligase activity

binding

intracellular

protein modification process

protein ubiquitination

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

metal ion binding

 
214172_x_at -0.292 5.901 -2.659 1.770e-02 0.210 -3.242 RYK RYK receptor-like tyrosine kinase 3 -135358667 BG032035 3q22 Hs.654562 13

nucleotide binding

transmembrane receptor protein tyrosine kinase activity

receptor activity

ATP binding

membrane fraction

plasma membrane

integral to plasma membrane

protein amino acid phosphorylation

signal transduction

axonogenesis

transferase activity

Wnt-protein binding

Wnt receptor activity

skeletal system morphogenesis

 
202958_at 0.263 5.968 2.659 1.770e-02 0.210 -3.242 PTPN9 protein tyrosine phosphatase, non-receptor type 9 15 -73546514 NM_002833 15q24.2 Hs.445775 13

non-membrane spanning protein tyrosine phosphatase activity

protein binding

cytoplasm

protein amino acid dephosphorylation

hydrolase activity

 
229204_at -0.426 5.855 -2.659 1.771e-02 0.210 -3.243 HP1BP3 heterochromatin protein 1, binding protein 3 1 -20941757 BE218428 1p36.12 Hs.142442 3

nucleosome

DNA binding

nucleus

chromosome

nucleosome assembly

 
214182_at -0.465 6.108 -2.659 1.771e-02 0.210 -3.243 ARF6 ADP-ribosylation factor 6 14 49429485 AA243143 14q21.3 Hs.525330 Hs.682124 86

nucleotide binding

ruffle

liver development

GTPase activity

protein binding

GTP binding

intracellular

membrane fraction

cytoplasm

endosome

Golgi apparatus

plasma membrane

cell cortex

apoptosis

cell motion

cell adhesion

small GTPase mediated signal transduction

protein transport

vesicle-mediated transport

positive regulation of actin filament polymerization

cortical actin cytoskeleton organization

ruffle organization

regulation of Rac protein signal transduction

negative regulation of receptor-mediated endocytosis

Endocytosis

Fc gamma R-mediated phagocytosis

230100_x_at -0.392 5.287 -2.659 1.772e-02 0.210 -3.243 PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 11 -76710707 AU147145 11q13-q14 Hs.435714 190

MAPKKK cascade

nucleotide binding

protein serine/threonine kinase activity

collagen binding

ATP binding

cytoplasm

Golgi apparatus

plasma membrane

focal adhesion

apoptosis

ER-nuclear signaling pathway

cytoskeleton organization

transferase activity

cell junction

positive regulation of JUN kinase activity

protein amino acid autophosphorylation

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

Axon guidance

Focal adhesion

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

Fc gamma R-mediated phagocytosis

Regulation of actin cytoskeleton

Epithelial cell signaling in Helicobacter pylori infection

Renal cell carcinoma

201513_at -0.459 6.391 -2.659 1.772e-02 0.210 -3.243 TSN translin 2 122229590 AI659180 2q21.1 Hs.75066 28

nucleus

cytoplasm

DNA recombination

sequence-specific DNA binding

 
201634_s_at -0.597 6.283 -2.658 1.773e-02 0.210 -3.244 CYB5B cytochrome b5 type B (outer mitochondrial membrane) 16 68015998 NM_030579 16q22.1 Hs.461131 7

mitochondrion

mitochondrial outer membrane

mitochondrial inner membrane

microsome

transport

enzyme activator activity

membrane

integral to membrane

heme binding

electron transport chain

metal ion binding

 
219223_at 0.246 6.888 2.658 1.773e-02 0.210 -3.244 C9orf7 chromosome 9 open reading frame 7 9 135314907 NM_017586 9q34 Hs.62003 7

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
218550_s_at -0.406 8.158 -2.658 1.774e-02 0.210 -3.244 LRRC20 leucine rich repeat containing 20 10 -71728734, -71728734 NM_018205 10q22.1 Hs.7778 5

protein binding

 
202425_x_at -0.381 8.582 -2.658 1.775e-02 0.210 -3.245 PPP3CA protein phosphatase 3 (formerly 2B), catalytic subunit, alpha isoform 4 -102163609 NM_000944 4q21-q24 Hs.435512 59

protein serine/threonine phosphatase activity

iron ion binding

calcium ion binding

calmodulin binding

nucleus

cytoplasm

calcineurin complex

protein amino acid dephosphorylation

zinc ion binding

hydrolase activity

MAPK signaling pathway

Calcium signaling pathway

Apoptosis

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Long-term potentiation

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

240459_at -0.240 3.787 -2.658 1.775e-02 0.210 -3.245 YTHDC1 YTH domain containing 1 4 -68858699 AW467048 4q13.2 Hs.175955 18

nucleus

mRNA processing

RNA splicing

 
1555763_x_at -0.285 4.166 -2.657 1.777e-02 0.210 -3.246 MKL1 megakaryoblastic leukemia (translocation) 1 22 -39136237 AF364036 22q13 Hs.654688 37

nucleic acid binding

transcription coactivator activity

actin monomer binding

protein binding

nucleus

cytoplasm

anti-apoptosis

positive regulation of transcription

 
216232_s_at -0.241 7.364 -2.657 1.779e-02 0.211 -3.247 GCN1L1 GCN1 general control of amino-acid synthesis 1-like 1 (yeast) 12 -119049396 AI697055 12q24.2 Hs.298716 11

protein binding

cytoplasm

ribosome

regulation of translation

translation factor activity, nucleic acid binding

 
202750_s_at -0.405 6.999 -2.657 1.779e-02 0.211 -3.247 TFIP11 tuftelin interacting protein 11 22 -25217894 AL080147 22q12.1 Hs.20225 19

nucleic acid binding

protein binding

proteinaceous extracellular matrix

intracellular

nucleus

spliceosomal complex

cytoplasm

mRNA processing

RNA splicing

nuclear speck

biomineral formation

 
208149_x_at 0.412 5.717 2.657 1.780e-02 0.211 -3.247 DDX11 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae) 12 31118045 NM_030653 12p11 Hs.443960 13

mitotic sister chromatid segregation

S phase of mitotic cell cycle

G2/M transition of mitotic cell cycle

nucleotide binding

DNA binding

RNA binding

ATP-dependent DNA helicase activity

ATP binding

nucleus

nucleolus

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

cell cycle

positive regulation of cell proliferation

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

 
203961_at 0.348 4.351 2.656 1.781e-02 0.211 -3.248 NEBL nebulette 10 -21108910, -21108910 AL157398 10p12 Hs.5025 15

actin binding

structural constituent of muscle

regulation of actin filament length

 
235076_at -0.400 7.223 -2.656 1.781e-02 0.211 -3.248 CALCOCO2 calcium binding and coiled-coil domain 2 17 44263370 AA149539 17q21.32 Hs.514920 11

protein binding

soluble fraction

nucleus

cytoplasm

Golgi apparatus

cytoskeleton

viral reproduction

response to interferon-gamma

protein homodimerization activity

perinuclear region of cytoplasm

 
224385_s_at 0.184 3.337 2.656 1.782e-02 0.211 -3.248 MOV10L1 Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse) 22 48870561, 48870811, 48927610 AF285604 22q13.33 Hs.62880 7

nucleotide binding

magnesium ion binding

RNA binding

ATP-dependent RNA helicase activity

helicase activity

ATP binding

intracellular

multicellular organismal development

germ cell development

spermatogenesis

muscle organ development

cell proliferation

hydrolase activity

negative regulation of cell cycle

 
229957_at 0.307 5.677 2.656 1.782e-02 0.211 -3.249 TMEM91 transmembrane protein 91 19 46561710, 46574277, 46575008 BF446281 19q13.2 Hs.709417 4

response to biotic stimulus

membrane

integral to membrane

 
201856_s_at -0.449 5.459 -2.656 1.783e-02 0.211 -3.249 ZFR zinc finger RNA binding protein 5 -32390212 BC000376 5p13.3 Hs.435231 6

DNA binding

RNA binding

intracellular

nucleus

nucleolus

cytoplasm

multicellular organismal development

zinc ion binding

 
211663_x_at 0.566 7.375 2.655 1.785e-02 0.211 -3.250 PTGDS prostaglandin D2 synthase 21kDa (brain) 9 138991776 M61900 9q34.2-q34.3 Hs.446429 63

prostaglandin biosynthetic process

prostaglandin-D synthase activity

transporter activity

binding

retinoid binding

extracellular region

nucleus

cytoplasm

rough endoplasmic reticulum

Golgi apparatus

fatty acid biosynthetic process

transport

membrane

isomerase activity

nuclear membrane

regulation of circadian sleep/wake cycle, sleep

perinuclear region of cytoplasm

Arachidonic acid metabolism

Metabolic pathways

201743_at 0.726 5.245 2.655 1.786e-02 0.211 -3.250 CD14 CD14 molecule 5 -139991500, -139991500 NM_000591 5q22-q32 5q31.1 Hs.163867 362

opsonin receptor activity

response to molecule of bacterial origin

protein binding

extracellular region

plasma membrane

plasma membrane

phagocytosis

apoptosis

inflammatory response

immune response

cell surface receptor linked signal transduction

peptidoglycan receptor activity

anchored to membrane

membrane raft

lipopolysaccharide receptor complex

MAPK signaling pathway

Toll-like receptor signaling pathway

Hematopoietic cell lineage

Regulation of actin cytoskeleton

Pathogenic Escherichia coli infection - EHEC

216220_s_at 0.245 6.332 2.655 1.786e-02 0.211 -3.251 ADORA1 adenosine A1 receptor 1 201363458 X68485 1q32.1 Hs.77867 58

adenosine receptor activity, G-protein coupled

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

phagocytosis

inflammatory response

signal transduction

G-protein coupled receptor protein signaling pathway

cell-cell signaling

nervous system development

induction of apoptosis by extracellular signals

Neuroactive ligand-receptor interaction

200685_at -0.272 7.117 -2.655 1.787e-02 0.211 -3.251 SFRS11 splicing factor, arginine/serine-rich 11 1 70443952 AU146237 1p31 Hs.479693 13

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

nucleolus

RNA splicing

 
200746_s_at 0.241 7.435 2.655 1.787e-02 0.211 -3.251 GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 1 -1706588 NM_002074 1p36.33 Hs.430425 Hs.709208 54

G-protein-coupled receptor binding

photoreceptor outer segment

GTPase activity

signal transducer activity

heterotrimeric G-protein complex

signal transduction

activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger

elevation of cytosolic calcium ion concentration

muscarinic acetylcholine receptor signaling pathway

Ras protein signal transduction

cell proliferation

hormone-mediated signaling

type 1 angiotensin receptor binding

sensory perception of taste

Chemokine signaling pathway

Taste transduction

208916_at 0.270 5.633 2.654 1.788e-02 0.211 -3.252 SLC1A5 solute carrier family 1 (neutral amino acid transporter), member 5 19 -51969981, -51969981, -51969981 AF105230 19q13.3 Hs.631582 27

receptor activity

protein binding

membrane fraction

integral to plasma membrane

transport

dicarboxylic acid transport

extracellular amino acid transport

neutral amino acid transmembrane transporter activity

symporter activity

neutral amino acid transport

membrane

sodium:dicarboxylate symporter activity

melanosome

 
225217_s_at -0.391 5.673 -2.653 1.791e-02 0.211 -3.253 BRPF3 bromodomain and PHD finger containing, 3 6 36272527 AB033112 6p21 Hs.520096 6

histone acetyltransferase complex

protein binding

zinc ion binding

histone H3 acetylation

metal ion binding

 
219456_s_at 0.211 3.966 2.653 1.792e-02 0.211 -3.253 RIN3 Ras and Rab interactor 3 14 92049877 AW027923 14q32.12 Hs.326822 8

GTPase activator activity

protein binding

cellular_component

cytoplasm

early endosome

endocytosis

signal transduction

Ras GTPase binding

cytoplasmic vesicle

 
218675_at 0.267 5.218 2.653 1.792e-02 0.211 -3.253 SLC22A17 solute carrier family 22, member 17 14 -22885378, -22885366 NM_020372 14q11.2 Hs.373498 6

transporter activity

ion transport

membrane

integral to membrane

 
240715_at 0.301 4.722 2.653 1.793e-02 0.211 -3.254 TBX5 T-box 5 12 -113288284, -113276117, -113276117 AW269421 12q24.1 Hs.381715 37

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

cytoplasm

induction of apoptosis

cell-cell signaling

multicellular organismal development

heart development

heart development

heart development

transcription factor binding

positive regulation of specific transcription from RNA polymerase II promoter

embryonic limb morphogenesis

negative regulation of cell migration

embryonic arm morphogenesis

forelimb morphogenesis

sequence-specific DNA binding

positive regulation of transcription, DNA-dependent

positive regulation of cardioblast differentiation

pericardium development

negative regulation of cardiac muscle cell proliferation

 
225310_at -0.290 7.261 -2.652 1.794e-02 0.211 -3.254 RBMX RNA binding motif protein, X-linked X -135783284 AI928344 Xq26.3 Hs.380118 Hs.710162 32

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

spliceosomal complex

biological_process

RNA splicing

heterogeneous nuclear ribonucleoprotein complex

 
227179_at -0.304 8.385 -2.652 1.794e-02 0.211 -3.255 STAU2 staufen, RNA binding protein, homolog 2 (Drosophila) 8 -74624394 AK002152 8q13-q21.1 Hs.561815 11

double-stranded RNA binding

intracellular

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

microtubule

transport

 
227792_at -0.289 7.361 -2.651 1.798e-02 0.212 -3.256 ITPRIPL2 inositol 1,4,5-triphosphate receptor interacting protein-like 2 16 19032754 AA490685 16p12.3 Hs.530899 Hs.648523 3

membrane

integral to membrane

 
203079_s_at -0.410 7.446 -2.651 1.799e-02 0.212 -3.257 CUL2 cullin 2 10 -35338811 NM_003591 10p11.21 Hs.82919 35

G1/S transition of mitotic cell cycle

protein binding

ubiquitin-dependent protein catabolic process

cell cycle arrest

negative regulation of cell proliferation

induction of apoptosis by intracellular signals

cullin-RING ubiquitin ligase complex

ubiquitin protein ligase binding

interspecies interaction between organisms

Ubiquitin mediated proteolysis

Pathways in cancer

Renal cell carcinoma

235070_at -0.303 8.267 -2.651 1.800e-02 0.212 -3.257 A2BP1 ataxin 2-binding protein 1 16 6009132, 6763810, 7322751 AL133898 16p13.3 Hs.459842 22

nucleotide binding

RNA binding

nucleus

cytoplasm

trans-Golgi network

mRNA processing

protein C-terminus binding

RNA splicing

RNA transport

 
232515_at 0.219 6.190 2.651 1.800e-02 0.212 -3.257 ASB3 ankyrin repeat and SOCS box-containing 3 2 -53750621 AU144567 2p16-p14 Hs.40763 10

intracellular signaling cascade

modification-dependent protein catabolic process

 
208786_s_at -0.439 9.127 -2.651 1.800e-02 0.212 -3.258 MAP1LC3B microtubule-associated protein 1 light chain 3 beta 16 85983301 AF183417 16q24.2 Hs.356061 22

protein binding

intracellular

cytoplasm

autophagic vacuole

microtubule

autophagy

modification-dependent protein catabolic process

organelle membrane

cytoplasmic vesicle

 
210277_at -0.527 6.521 -2.651 1.800e-02 0.212 -3.258 AP4S1 adaptor-related protein complex 4, sigma 1 subunit 14 30564433, 30564433 AF155159 14q12 Hs.293411 4

transporter activity

protein binding

Golgi apparatus

coated pit

intracellular protein transport

protein transporter activity

membrane

vesicle-mediated transport

membrane coat

Lysosome

224036_s_at -0.392 5.328 -2.651 1.800e-02 0.212 -3.258 LMBR1 limb region 1 homolog (mouse) 7 -156166330 AF063592 7q36 Hs.209989 24

receptor activity

membrane

integral to membrane

 
231779_at -0.441 6.289 -2.651 1.800e-02 0.212 -3.258 IRAK2 interleukin-1 receptor-associated kinase 2 3 10181562 AI246590 3p25.3 Hs.449207 15

regulation of cytokine-mediated signaling pathway

MyD88-dependent toll-like receptor signaling pathway

protein kinase activity

NF-kappaB-inducing kinase activity

ATP binding

protein amino acid phosphorylation

inflammatory response

signal transduction

I-kappaB kinase/NF-kappaB cascade

cell surface

lipopolysaccharide-mediated signaling pathway

negative regulation of NF-kappaB transcription factor activity

protein homodimerization activity

protein heterodimerization activity

positive regulation of NF-kappaB transcription factor activity

interleukin-1-mediated signaling pathway

response to interleukin-1

Apoptosis

Neurotrophin signaling pathway

201189_s_at 0.231 6.302 2.650 1.802e-02 0.212 -3.259 ITPR3 inositol 1,4,5-triphosphate receptor, type 3 6 33697138 NM_002224 6p21 Hs.65758 40

inositol hexakisphosphate binding

ion channel activity

inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity

calcium channel activity

calcium ion binding

protein binding

nucleus

nuclear outer membrane

nucleoplasm

nucleolus

cytoplasm

endoplasmic reticulum

microsome

integral to plasma membrane

brush border

ion transport

calcium ion transport

G-protein coupled receptor protein signaling pathway

elevation of cytosolic calcium ion concentration

membrane

phosphoinositide binding

cell soma

myelin sheath

inositol 1,3,4,5 tetrakisphosphate binding

apical part of cell

sensory perception of bitter taste

sensory perception of sweet taste

sensory perception of umami taste

protein homooligomerization

protein heterooligomerization

response to calcium ion

inositol 1,4,5 trisphosphate binding

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Gap junction

Long-term potentiation

Long-term depression

Taste transduction

GnRH signaling pathway

Alzheimer's disease

228424_at 0.291 5.898 2.650 1.803e-02 0.212 -3.259 NAALADL1 N-acetylated alpha-linked acidic dipeptidase-like 1 11 -64568870 AW170591 11q12 Hs.13967 3

carboxypeptidase activity

plasma membrane

proteolysis

peptidase activity

metallopeptidase activity

zinc ion binding

integral to membrane

dipeptidase activity

metal ion binding

 
212757_s_at -0.495 8.897 -2.650 1.803e-02 0.212 -3.259 CAMK2G calcium/calmodulin-dependent protein kinase II gamma 10 -75242264, -75242264 BF111268 10q22 Hs.523045 75

nucleotide binding

calmodulin-dependent protein kinase activity

calcium-dependent protein serine/threonine phosphatase activity

calmodulin binding

ATP binding

cellular_component

calcium- and calmodulin-dependent protein kinase complex

protein amino acid phosphorylation

transferase activity

insulin secretion

ErbB signaling pathway

Calcium signaling pathway

Wnt signaling pathway

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

GnRH signaling pathway

Melanogenesis

Glioma

213423_x_at 0.416 6.020 2.650 1.803e-02 0.212 -3.259 TUSC3 tumor suppressor candidate 3 8 15442100 AI884858 8p22 Hs.591845 13

dolichyl-diphosphooligosaccharide-protein glycotransferase activity

endoplasmic reticulum

oligosaccharyltransferase complex

membrane

integral to membrane

protein amino acid N-linked glycosylation via asparagine

 
234307_s_at 0.361 6.269 2.650 1.804e-02 0.212 -3.260 KIF26A kinesin family member 26A 14 103674812 AK026406 14q32.33 Hs.134970 3

nucleotide binding

microtubule motor activity

ATP binding

microtubule

microtubule-based movement

 
217898_at -0.294 8.557 -2.649 1.805e-02 0.212 -3.260 C15orf24 chromosome 15 open reading frame 24 15 -32163515 NM_020154 15q14 Hs.160565 6

cytoplasm

biological_process

membrane

integral to membrane

purine nucleotide binding

 
1554333_at -0.991 6.512 -2.649 1.806e-02 0.212 -3.261 DNAJA4 DnaJ (Hsp40) homolog, subfamily A, member 4 15 76343541, 76344043, 76345614 BC031044 15q25.1 Hs.513053 5

protein folding

zinc ion binding

membrane

heat shock protein binding

metal ion binding

unfolded protein binding

 
223547_at -0.442 5.665 -2.649 1.807e-02 0.212 -3.261 JKAMP JNK1/MAPK8-associated membrane protein 14 59020913 AL038769 14q23.1 Hs.446850 12

plasma membrane

integral to membrane

 
213000_at -0.405 6.932 -2.649 1.807e-02 0.212 -3.261 MORC3 MORC family CW-type zinc finger 3 21 36614356 AP000693 21q22.13 Hs.421150 11

ATP binding

cell aging

zinc ion binding

PML body

peptidyl-serine phosphorylation

metal ion binding

negative regulation of fibroblast proliferation

protein stabilization

maintenance of protein location in nucleus

 
227158_at 0.277 5.485 2.649 1.807e-02 0.212 -3.261 C14orf126 chromosome 14 open reading frame 126 14 -30984993 AU149257 14q12 Hs.116014 4

cytoplasm

hydrolase activity, acting on ester bonds

D-amino acid catabolic process

 
230847_at 0.260 3.855 2.649 1.808e-02 0.212 -3.261 WRNIP1 Werner helicase interacting protein 1 6 2710664 T79870 6p25.2 Hs.236828 14

nucleotide binding

DNA synthesis during DNA repair

DNA binding

protein binding

protein binding

ATP binding

nucleus

response to DNA damage stimulus

hydrolase activity

ATPase activity

regulation of DNA replication initiation

 
226257_x_at 0.308 8.986 2.649 1.808e-02 0.212 -3.262 MRPS22 mitochondrial ribosomal protein S22 3 140545550 AA631191 3q23 Hs.75724 13

molecular_function

structural constituent of ribosome

protein binding

mitochondrion

mitochondrial small ribosomal subunit

ribosome

biological_process

 
204313_s_at -0.292 6.396 -2.648 1.809e-02 0.212 -3.262 CREB1 cAMP responsive element binding protein 1 2 208102860 AA161486 2q34 Hs.516646 215

transcription factor activity

transcription cofactor activity

nucleus

nucleoplasm

regulation of transcription, DNA-dependent

protein amino acid phosphorylation

signal transduction

response to organic substance

sequence-specific DNA binding

interspecies interaction between organisms

positive regulation of transcription from RNA polymerase II promoter

protein dimerization activity

Antigen processing and presentation

Melanogenesis

Huntington's disease

Prostate cancer

1555250_a_at -0.527 6.887 -2.648 1.809e-02 0.212 -3.262 CPEB3 cytoplasmic polyadenylation element binding protein 3 10 -93798378 BC036444 10q23.32 Hs.131683 7

nucleotide binding

RNA binding

 
211441_x_at -0.223 3.690 -2.648 1.809e-02 0.212 -3.262 CYP3A43 cytochrome P450, family 3, subfamily A, polypeptide 43 7 99263571 AF280113 7q21.1 Hs.306220 Hs.654391 Hs.695915 17

endoplasmic reticulum

microsome

electron carrier activity

membrane

heme binding

metal ion binding

oxidation reduction

aromatase activity

gamma-Hexachlorocyclohexane degradation

Linoleic acid metabolism

Retinol metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

Drug metabolism - other enzymes

Metabolic pathways

200847_s_at -0.438 9.716 -2.648 1.810e-02 0.212 -3.263 TMEM66 transmembrane protein 66 8 -30040172 NM_016127 8p12 Hs.521487 10

membrane

integral to membrane

 
223276_at 0.540 6.329 2.648 1.810e-02 0.212 -3.263 MST150 MSTP150 5 150138059 AF313413 5q33.1 Hs.29444 4

membrane

integral to membrane

 
220184_at 0.433 4.792 2.647 1.814e-02 0.212 -3.265 NANOG Nanog homeobox 12 7833261 NM_024865 12p13.31 Hs.661360 42

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

cell proliferation

embryonic development

sequence-specific DNA binding

regulation of cell differentiation

 
222438_at -0.536 4.948 -2.647 1.815e-02 0.212 -3.265 MED4 mediator complex subunit 4 13 -47548092 AK001934 13q14.2 Hs.181112 21

transcription cofactor activity

receptor activity

protein binding

nucleus

nucleolus

cytoplasm

regulation of transcription from RNA polymerase II promoter

transcription initiation from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

transcription activator activity

ligand-dependent nuclear receptor transcription coactivator activity

androgen receptor signaling pathway

vitamin D receptor binding

regulation of transcription

thyroid hormone receptor binding

 
229084_at 0.359 4.052 2.646 1.816e-02 0.213 -3.265 CNTN4 contactin 4 3 2117246, 2908920, 3056307 R42166 3p26-p25 Hs.298705 16

protein binding

extracellular region

plasma membrane

cell adhesion

neuron adhesion

nervous system development

axon guidance

axonal fasciculation

brain development

axon

neuron projection development

anchored to membrane

negative regulation of neuron differentiation

regulation of synaptic plasticity

 
202271_at -0.270 7.657 -2.646 1.817e-02 0.213 -3.266 FBXO28 F-box protein 28 1 222368413 AB007952 1q42.11 Hs.64691 Hs.713992 10

modification-dependent protein catabolic process

 
217730_at -0.336 8.118 -2.646 1.819e-02 0.213 -3.267 TMBIM1 transmembrane BAX inhibitor motif containing 1 2 -218847160 NM_022152 2p24.3-p24.1 Hs.591605 9

membrane

integral to membrane

 
217555_at -0.273 5.076 -2.645 1.820e-02 0.213 -3.267 SMC1A structural maintenance of chromosomes 1A X -53417794 AI042030 Xp11.22-p11.21 Hs.211602 47

cell cycle checkpoint

nucleotide binding

nuclear mRNA splicing, via spliceosome

condensed chromosome kinetochore

condensed nuclear chromosome

chromatin binding

microtubule motor activity

protein binding

ATP binding

nucleus

chromosome

cytoplasm

DNA repair

response to DNA damage stimulus

cell cycle

mitotic spindle organization

mitotic sister chromatid cohesion

meiosis

cohesin core heterodimer

response to radiation

DNA damage response, signal transduction

protein heterodimerization activity

chromosome organization

cell division

Cell cycle

224631_at -0.402 6.839 -2.645 1.821e-02 0.213 -3.268 ZFP91 zinc finger protein 91 homolog (mouse) 11 58103162 AA758013 11q12 Hs.524920 10

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
33736_at 0.355 7.107 2.645 1.821e-02 0.213 -3.268 STOML1 stomatin (EPB72)-like 1 15 -72062612 Y16522 15q24-q25 Hs.194816 9

molecular_function

sterol carrier activity

cellular_component

biological_process

membrane

integral to membrane

 
209404_s_at -0.341 6.153 -2.644 1.823e-02 0.213 -3.269 TMED7 transmembrane emp24 protein transport domain containing 7 5 -114977101 AF151867 5q22.3 Hs.642817 Hs.710895 7

endoplasmic reticulum

transport

membrane

integral to membrane

 
1562761_at -0.195 2.729 -2.644 1.824e-02 0.213 -3.270 C9orf95 chromosome 9 open reading frame 95 9 -76865935 BC026243 9q21.13 Hs.494186 6

nucleotide binding

magnesium ion binding

ATP binding

transferase activity

pyridine nucleotide biosynthetic process

ribosylnicotinamide kinase activity

Nicotinate and nicotinamide metabolism

201989_s_at -0.256 6.877 -2.644 1.825e-02 0.213 -3.270 CREBL2 cAMP responsive element binding protein-like 2 12 12656097 AL529409 12p13 Hs.591156 5

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

cell cycle

signal transduction

sequence-specific DNA binding

protein dimerization activity

 
205595_at 0.230 5.158 2.644 1.827e-02 0.213 -3.271 DSG3 desmoglein 3 (pemphigus vulgaris antigen) 18 27281729 NM_001944 18q12.1-q12.2 Hs.1925 51

calcium ion binding

protein binding

cytosol

plasma membrane

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

cell junction

desmosome

 
204043_at 0.375 5.508 2.643 1.829e-02 0.213 -3.272 TCN2 transcobalamin II; macrocytic anemia 22 29333160 NM_000355 22q12.2 Hs.417948 60

extracellular region

extracellular space

ion transport

cobalt ion transport

cobalt ion transmembrane transporter activity

cobalamin transport

cobalamin binding

cobalt ion binding

 
209921_at 0.704 4.407 2.643 1.829e-02 0.213 -3.272 SLC7A11 solute carrier family 7, (cationic amino acid transporter, y+ system) member 11 4 -139304697 AB040875 4q28-q32 Hs.390594 23

transport

amino acid transport

amino acid transmembrane transporter activity

cystine:glutamate antiporter activity

membrane

integral to membrane

 
57163_at 0.271 5.760 2.643 1.829e-02 0.213 -3.272 ELOVL1 elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1 1 -43601658 H93026 1p34.2 Hs.25597 7

protein binding

endoplasmic reticulum

fatty acid biosynthetic process

membrane

integral to membrane

 
241742_at 0.254 4.624 2.643 1.830e-02 0.213 -3.272 PRAM1 PML-RARA regulated adaptor molecule 1 19 -8460939 AW027174 19p13.2 Hs.465812 12

integrin-mediated signaling pathway

lipid binding

regulation of neutrophil degranulation

 
224061_at 0.291 6.347 2.642 1.833e-02 0.214 -3.274 INMT indolethylamine N-methyltransferase 7 30758275 AF128846 7p15.3-p15.2 Hs.632629 6

cytoplasm

methyltransferase activity

transferase activity

amine N-methyltransferase activity

Tryptophan metabolism

214311_at 0.224 6.259 2.642 1.833e-02 0.214 -3.274 ZFPL1 zinc finger protein-like 1 11 64608269 AI767884 11q13 Hs.714995 Hs.98170 8

DNA binding

protein binding

nucleus

Golgi apparatus

zinc ion binding

membrane

integral to membrane

vesicle-mediated transport

regulation of transcription

metal ion binding

 
226477_at -0.299 5.647 -2.642 1.833e-02 0.214 -3.274 VPRBP Vpr (HIV-1) binding protein 3 -51408337 AK023239 3p21.2 Hs.716623 14

binding

cytoplasm

modification-dependent protein catabolic process

interspecies interaction between organisms

 
203614_at -0.270 7.574 -2.642 1.833e-02 0.214 -3.274 UTP14C UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast) 13 51496827 NM_021645 13q14.2 Hs.512963 7

nucleus

nucleolus

rRNA processing

meiosis

multicellular organismal development

spermatogenesis

cell differentiation

small-subunit processome

 
231919_at -0.340 6.052 -2.642 1.834e-02 0.214 -3.274 DBT dihydrolipoamide branched chain transacylase E2 1 -100425065 AK024946 1p31 Hs.709187 34

protein binding

mitochondrion

mitochondrial alpha-ketoglutarate dehydrogenase complex

metabolic process

acyltransferase activity

transferase activity

lipoic acid binding

mitochondrial nucleoid

dihydrolipoyllysine-residue (2-methylpropanoyl)transferase activity

acyl-CoA biosynthetic process

cofactor binding

Valine, leucine and isoleucine degradation

Metabolic pathways

216693_x_at 0.392 5.548 2.641 1.835e-02 0.214 -3.275 HDGFRP3 hepatoma-derived growth factor, related protein 3 15 -81597819 AL133102 15q25.2 Hs.513954 9

nucleus

cytoplasm

growth factor activity

cell proliferation

 
1558894_a_at -0.293 4.077 -2.641 1.837e-02 0.214 -3.276 CCDC67 coiled-coil domain containing 67 11 92703530 AK058122 11q21 Hs.436625 2    
207233_s_at -0.310 8.486 -2.641 1.837e-02 0.214 -3.276 MITF microphthalmia-associated transcription factor 3 69871322, 69895651, 69998131, 70010945, 70068442 NM_000248 3p14.2-p14.1 Hs.166017 Hs.618266 93

DNA binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

transcription activator activity

transcription activator activity

melanocyte differentiation

Melanogenesis

Pathways in cancer

Melanoma

223886_s_at -0.225 9.888 -2.641 1.837e-02 0.214 -3.276 RNF146 ring finger protein 146 6 127629712 AL136829 6q22.1-q22.33 Hs.267120 12

protein binding

zinc ion binding

metal ion binding

 
205930_at -0.392 6.681 -2.640 1.838e-02 0.214 -3.276 GTF2E1 general transcription factor IIE, polypeptide 1, alpha 56kDa 3 121944247 NM_005513 3q21-q24 Hs.445272 41

RNA polymerase II transcription factor activity

protein binding

nucleus

nucleoplasm

transcription factor TFIIE complex

transcription initiation from RNA polymerase II promoter

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

zinc ion binding

regulation of transcription

metal ion binding

Basal transcription factors

202329_at 0.369 5.408 2.640 1.838e-02 0.214 -3.276 CSK c-src tyrosine kinase 15 72861477 NM_004383 15q23-q25 Hs.77793 130

nucleotide binding

non-membrane spanning protein tyrosine kinase activity

ATP binding

cytoplasm

plasma membrane

plasma membrane

cell-cell junction

protein amino acid phosphorylation

protein C-terminus binding

negative regulation of cell proliferation

transferase activity

Chemokine signaling pathway

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Epithelial cell signaling in Helicobacter pylori infection

225501_at -0.308 6.691 -2.640 1.839e-02 0.214 -3.277 PHF6 PHD finger protein 6 X 133335007, 133335007 AK027039 Xq26.3 Hs.356501 16

protein binding

nucleus

nucleolus

zinc ion binding

regulation of transcription

metal ion binding

 
209983_s_at 0.231 4.224 2.640 1.839e-02 0.214 -3.277 NRXN2 neurexin 2 11 -64130221, -64130221 AB035266 11q13 Hs.372938 16

calcium ion binding

protein binding

cell adhesion

membrane

integral to membrane

Cell adhesion molecules (CAMs)

223924_at 0.442 4.119 2.639 1.842e-02 0.214 -3.278 TTC25 tetratricopeptide repeat domain 25 17 37340413 AL136760 17q21.2 Hs.201134 8

protein binding

cytoplasm

 
208783_s_at -0.335 8.333 -2.639 1.844e-02 0.214 -3.279 CD46 CD46 molecule, complement regulatory protein 1 205992024 AL570661 1q32 Hs.510402 112

receptor activity

plasma membrane

integral to plasma membrane

complement activation, classical pathway

single fertilization

interspecies interaction between organisms

innate immune response

Complement and coagulation cascades

209386_at 0.364 8.896 2.639 1.845e-02 0.214 -3.280 TM4SF1 transmembrane 4 L six family member 1 3 -150569494 AI346835 3q21-q25 Hs.715499 16

molecular_function

integral to plasma membrane

biological_process

membrane

 
229521_at 0.287 5.344 2.638 1.845e-02 0.214 -3.280 FLJ36031 hypothetical protein FLJ36031 7 -106086384 BE466274 7q22.3 Hs.29692 5    
207117_at 0.453 2.631 2.638 1.846e-02 0.214 -3.280 ZNF117 zinc finger protein 117 7 -64072264 NM_015852 7q11.21 Hs.250693 5

molecular_function

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

biological_process

zinc ion binding

metal ion binding

 
226916_x_at -0.235 6.304 -2.638 1.846e-02 0.214 -3.280 DPP9 dipeptidyl-peptidase 9 19 -4626243 AW190431 19p13.3 Hs.515081 14

aminopeptidase activity

cytoplasm

cytosol

proteolysis

peptidase activity

serine-type peptidase activity

membrane

 
204483_at -0.588 13.028 -2.638 1.847e-02 0.214 -3.281 ENO3 enolase 3 (beta, muscle) 17 4795130 NM_001976 17pter-p11 Hs.224171 11

phosphopyruvate hydratase complex

magnesium ion binding

phosphopyruvate hydratase activity

cytoplasm

glycolysis

lyase activity

Glycolysis / Gluconeogenesis

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

RNA degradation

210091_s_at -0.318 7.854 -2.638 1.847e-02 0.214 -3.281 DTNA dystrobrevin, alpha 18 30327251, 30327251, 30327251, 30427279, 30544193, 30589937, 30589937, 30652299, 30652299 U46745 18q12 Hs.643454 38

calcium ion binding

protein binding

cytoplasm

striated muscle contraction

signal transduction

neuromuscular synaptic transmission

zinc ion binding

cell junction

synapse

 
230620_at 0.234 5.409 2.637 1.850e-02 0.214 -3.282 USP27X ubiquitin specific peptidase 27, X-linked X 49531209 BE550967 Xp11.23 Hs.143587 3

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
202610_s_at -0.599 7.381 -2.637 1.851e-02 0.214 -3.283 MED14 mediator complex subunit 14 X -40393738 AF135802 Xp11.4-p11.2 Hs.407604 33

receptor activity

protein binding

nucleus

transcription initiation from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

ligand-dependent nuclear receptor transcription coactivator activity

androgen receptor signaling pathway

vitamin D receptor binding

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

thyroid hormone receptor binding

 
226548_at 0.293 7.623 2.637 1.851e-02 0.214 -3.283 SBK1 SH3-binding domain kinase 1 16 28211340 AI935915 16p11.2 Hs.97837 3

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

transferase activity

 
239356_at 0.229 4.258 2.637 1.852e-02 0.214 -3.283 LOC100129122 hypothetical LOC100129122 13   AA603474 13q32.3        
219175_s_at -0.342 6.998 -2.636 1.853e-02 0.214 -3.284 SLC41A3 solute carrier family 41, member 3 3 -127207889, -127207889 NM_017836 3q21.2-q21.3 Hs.573007 5

plasma membrane

cation transport

cation transmembrane transporter activity

integral to membrane

 
212375_at -0.236 6.623 -2.636 1.853e-02 0.214 -3.284 EP400 E1A binding protein p400 12 131000460 AL563727 12q24.33 Hs.699245 19

nucleotide binding

DNA binding

helicase activity

ATP binding

nucleus

nucleolus

chromatin modification

hydrolase activity

NuA4 histone acetyltransferase complex

histone H4 acetylation

histone H2A acetylation

 
226268_at -0.534 6.008 -2.636 1.855e-02 0.215 -3.285 RAB21 RAB21, member RAS oncogene family 12 70434924 AI309554 12q21.1 Hs.524590 12

Golgi membrane

nucleotide binding

protein binding

GTP binding

endosome

endoplasmic reticulum

Golgi apparatus

small GTPase mediated signal transduction

protein transport

membrane

cytoplasmic vesicle membrane

cytoplasmic vesicle

early endosome membrane

 
200795_at 0.344 10.572 2.635 1.860e-02 0.215 -3.287 SPARCL1 SPARC-like 1 (hevin) 4 -88613511 NM_004684 4q22.1 Hs.62886 14

calcium ion binding

extracellular region

proteinaceous extracellular matrix

signal transduction

synapse

 
219297_at -0.268 6.172 -2.634 1.861e-02 0.215 -3.287 WDR44 WD repeat domain 44 X 117364069 NM_019045 Xq24 Hs.98510 16

cytoplasm

endosome

Golgi apparatus

cytosol

endosome membrane

membrane

perinuclear region of cytoplasm

 
211538_s_at -1.111 9.831 -2.634 1.861e-02 0.215 -3.288 HSPA2 heat shock 70kDa protein 2 14 64076938 U56725 14q24.1 Hs.719230 42

nucleotide binding

ATP binding

mitochondrion

response to unfolded protein

male meiosis

spermatid development

cell surface

unfolded protein binding

MAPK signaling pathway

Endocytosis

Antigen processing and presentation

221888_at 0.244 5.934 2.634 1.862e-02 0.215 -3.288 CC2D1A coiled-coil and C2 domain containing 1A 19 13877955 AW183030 19p13.12 Hs.269592 18

DNA binding

signal transducer activity

nucleus

nucleolus

cytoplasm

positive regulation of I-kappaB kinase/NF-kappaB cascade

regulation of transcription

 
204819_at 0.296 5.282 2.634 1.862e-02 0.215 -3.288 FGD1 FYVE, RhoGEF and PH domain containing 1 X -54488611 NM_004463 Xp11.21 Hs.709201 23

ruffle

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

protein binding

intracellular

nucleus

cytoplasm

Golgi apparatus

cytoskeleton

plasma membrane

signal transduction

multicellular organismal development

zinc ion binding

regulation of cell shape

organ morphogenesis

lamellipodium

actin cytoskeleton organization

small GTPase binding

regulation of Rho protein signal transduction

regulation of Cdc42 GTPase activity

filopodium assembly

metal ion binding

Regulation of actin cytoskeleton

227687_at -0.406 5.901 -2.633 1.864e-02 0.215 -3.289 HYLS1 hydrolethalus syndrome 1 11 125258718, 125262164 AL523264 11q24.2 Hs.585071 7

cytoplasm

 
237759_at 0.279 5.367 2.633 1.865e-02 0.215 -3.289 CD48 CD48 molecule 1 -158915159 AI378026 1q21.3-q22 Hs.243564 35

protein binding

plasma membrane

integral to plasma membrane

defense response

anchored to membrane

membrane raft

Natural killer cell mediated cytotoxicity

201968_s_at -0.401 12.264 -2.633 1.865e-02 0.215 -3.290 PGM1 phosphoglucomutase 1 1 63831534 NM_002633 1p31 Hs.1869 22

magnesium ion binding

phosphoglucomutase activity

phosphoglucomutase activity

cytoplasm

cytosol

carbohydrate metabolic process

glucose metabolic process

isomerase activity

Glycolysis / Gluconeogenesis

Pentose phosphate pathway

Galactose metabolism

Starch and sucrose metabolism

Amino sugar and nucleotide sugar metabolism

Streptomycin biosynthesis

Metabolic pathways

204777_s_at 0.244 5.155 2.633 1.867e-02 0.215 -3.290 MAL mal, T-cell differentiation protein 2 95055205 NM_002371 2cen-q13 Hs.80395 28

membrane raft polarization

endosome

endoplasmic reticulum

integral to plasma membrane

induction of apoptosis

central nervous system development

lipid binding

channel activity

membrane

apical plasma membrane

apoptotic protease activator activity

structural constituent of myelin sheath

cell differentiation

myelination

myelination

membrane raft

apical protein localization

 
1564190_x_at 0.318 4.303 2.633 1.867e-02 0.215 -3.291 ZNF519 zinc finger protein 519 18 -14094723 AK096748 18p11.21 Hs.352635 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
203923_s_at 0.446 5.501 2.632 1.867e-02 0.215 -3.291 CYBB cytochrome b-245, beta polypeptide X 37524213 NM_000397 Xp21.1 Hs.292356 96

voltage-gated ion channel activity

protein binding

cytoplasm

mitochondrion

plasma membrane

ion transport

inflammatory response

electron carrier activity

superoxide-generating NADPH oxidase activity

superoxide-generating NADPH oxidase activity

oxidoreductase activity

heme binding

electron transport chain

superoxide anion generation

superoxide anion generation

NADPH oxidase complex

NADPH oxidase complex

innate immune response

innate immune response

respiratory burst

respiratory burst

metal ion binding

protein heterodimerization activity

FAD binding

Leukocyte transendothelial migration

1558675_s_at -0.362 6.888 -2.632 1.868e-02 0.215 -3.291 SDCCAG1 serologically defined colon cancer antigen 1 14 -49320281 AV724508 14q22 Hs.655964 8

nucleus

cytoplasm

 
212514_x_at -0.519 6.111 -2.632 1.869e-02 0.215 -3.291 DDX3X DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked X 41077594 R60068 Xp11.3-p11.23 Hs.719127 34

nucleotide binding

DNA binding

RNA binding

ATP-dependent RNA helicase activity

helicase activity

protein binding

ATP binding

nucleus

cytoplasm

plasma membrane

nuclear speck

hydrolase activity

interspecies interaction between organisms

RIG-I-like receptor signaling pathway

226995_at 0.392 4.592 2.632 1.869e-02 0.215 -3.291 LOC642852 hypothetical LOC642852 21 45532394 AV705934 21q22.3 Hs.11637 Hs.676029 Hs.710382 2    
202050_s_at -0.260 7.009 -2.632 1.869e-02 0.215 -3.291 ZMYM4 zinc finger, MYM-type 4 1 35507154 AI650586 1p32-p34 Hs.269211 7

DNA binding

nucleus

multicellular organismal development

zinc ion binding

metal ion binding

 
225994_at -0.646 6.347 -2.632 1.869e-02 0.215 -3.292 CPSF2 cleavage and polyadenylation specific factor 2, 100kDa 14 91658081 AK023583 14q31.1 Hs.657632 24

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

hydrolase activity

 
211672_s_at -0.395 6.332 -2.632 1.869e-02 0.215 -3.292 ARPC4 actin related protein 2/3 complex, subunit 4, 20kDa 3 9809226 AF019888 3p25.3 Hs.323342 16

cytoplasm

cytoskeleton

Arp2/3 protein complex

actin filament polymerization

protein binding, bridging

cell projection

actin nucleation

actin filament binding

Fc gamma R-mediated phagocytosis

Regulation of actin cytoskeleton

59625_at -0.209 7.889 -2.632 1.870e-02 0.215 -3.292 NOL3 nucleolar protein 3 (apoptosis repressor with CARD domain) 16 65765370 AI912351 16q21-q23 Hs.513667 22

RNA binding

intracellular

nucleus

nucleolus

cytoplasm

cytosol

mRNA processing

anti-apoptosis

RNA splicing

identical protein binding

regulation of apoptosis

 
205099_s_at 0.348 4.670 2.631 1.871e-02 0.215 -3.293 CCR1 chemokine (C-C motif) receptor 1 3 -46218203 NM_001295 3p21 Hs.301921 71

receptor activity

G-protein coupled receptor activity

protein binding

plasma membrane

plasma membrane

integral to plasma membrane

chemotaxis

inflammatory response

immune response

cell adhesion

G-protein signaling, coupled to cyclic nucleotide second messenger

elevation of cytosolic calcium ion concentration

cell-cell signaling

C-C chemokine receptor activity

cytokine-mediated signaling pathway

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

239640_at 0.201 4.960 2.631 1.871e-02 0.215 -3.293 LOC401320 hypothetical LOC401320 7   AI221073 7p15.1 Hs.561708 2    
224113_at 0.291 5.627 2.631 1.875e-02 0.216 -3.294 CARD14 caspase recruitment domain family, member 14 17 75766875, 75776193 BC001326 17q25 Hs.675480 Hs.696253 7

positive regulation of protein amino acid phosphorylation

protein binding

intracellular

cytoplasm

plasma membrane

activation of NF-kappaB-inducing kinase activity

regulation of apoptosis

CARD domain binding

 
202208_s_at 0.347 5.635 2.630 1.876e-02 0.216 -3.295 ARL4C ADP-ribosylation factor-like 4C 2 -235066424 BC001051 2q37.1 Hs.111554 Hs.719190 7

nucleotide binding

GTPase activity

GTP binding

intracellular

nucleus

small GTPase mediated signal transduction

 
204882_at 0.309 5.480 2.630 1.877e-02 0.216 -3.295 ARHGAP25 Rho GTPase activating protein 25 2 68815471, 68855436 NM_014882 2p13.3 Hs.531807 4

GTPase activator activity

intracellular

signal transduction

 
224804_s_at 0.242 7.498 2.629 1.879e-02 0.216 -3.296 C15orf17 chromosome 15 open reading frame 17 15 -72979380 AU152410 15q24.1 Hs.367690 4    
207342_at 0.249 3.480 2.629 1.882e-02 0.216 -3.298 CNGB1 cyclic nucleotide gated channel beta 1 16 -56546080, -56473744 NM_001297 16q13 Hs.147062 16

nucleotide binding

ion channel activity

intracellular cAMP activated cation channel activity

membrane fraction

ion transport

phototransduction

membrane

integral to membrane

intracellular cyclic nucleotide activated cation channel complex

cAMP binding

photoreceptor cell maintenance

Olfactory transduction

222021_x_at 0.269 10.254 2.629 1.882e-02 0.216 -3.298 SDHALP1 succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1 3 -197171189 AI348006 3q29 Hs.566872 Hs.596261 2    
221487_s_at -0.720 7.202 -2.628 1.885e-02 0.216 -3.299 ENSA endosulfine alpha 1 -148866145, -148862377, -148862377, -148861222, -148861222 AF157510 1q21.3 Hs.632456 15

receptor binding

cytoplasm

transport

response to nutrient

ion channel inhibitor activity

 
211658_at 0.261 8.155 2.628 1.886e-02 0.216 -3.299 PRDX2 peroxiredoxin 2 19 -12772426, -12768633 L19185 19p13.2 Hs.432121 52

cytoplasm

anti-apoptosis

response to oxidative stress

response to oxidative stress

thioredoxin peroxidase activity

oxidoreductase activity

regulation of apoptosis

cell redox homeostasis

oxidation reduction

 
227777_at -0.426 6.772 -2.628 1.886e-02 0.216 -3.300 C10orf18 chromosome 10 open reading frame 18 10 5766806 BF223040 10p15.1 Hs.699500 4    
1556095_at -1.235 3.986 -2.627 1.886e-02 0.216 -3.300 UNC13C unc-13 homolog C (C. elegans) 15 52092392 AL834407 15q21.3 Hs.657273 4

cytoplasm

plasma membrane

exocytosis

intracellular signaling cascade

synaptic transmission

zinc ion binding

diacylglycerol binding

cell junction

synapse

metal ion binding

 
219949_at -0.502 10.555 -2.627 1.887e-02 0.216 -3.300 LRRC2 leucine rich repeat containing 2 3 -46531881, -46531881 NM_024512 3p21.31 Hs.657345 7

protein binding

 
1558345_a_at 0.268 5.690 2.627 1.887e-02 0.216 -3.300 LOC439911 hypothetical gene supported by NM_194304 10   BI715235 10q11.21        
217383_at -0.445 5.805 -2.627 1.887e-02 0.216 -3.300 PGK1 phosphoglycerate kinase 1 X 77246321 S81916 Xq13 Hs.78771 52

nucleotide binding

phosphoglycerate kinase activity

ATP binding

cytoplasm

glycolysis

phosphorylation

transferase activity

Glycolysis / Gluconeogenesis

Carbon fixation in photosynthetic organisms

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

231106_at -0.276 6.610 -2.627 1.888e-02 0.216 -3.301 BMS1P5 BMS1 pseudogene 5 10 -46157620 AI684591 10q11.22 Hs.314437 Hs.711074 2    
209785_s_at -0.458 9.028 -2.627 1.889e-02 0.217 -3.301 PLA2G4C phospholipase A2, group IVC (cytosolic, calcium-independent) 19 -53242912 AF065214 19q13.3 Hs.631562 22

phospholipid binding

cytosol

inflammatory response

intracellular signaling cascade

parturition

metabolic process

membrane

lipid catabolic process

hydrolase activity

arachidonic acid metabolic process

glycerophospholipid catabolic process

calcium-independent phospholipase A2 activity

 
228789_at -0.267 3.020 -2.626 1.891e-02 0.217 -3.302 MTMR6 myotubularin related protein 6 13 -24718340 AI290971 13q12 Hs.643702 17

protein serine/threonine phosphatase activity

protein tyrosine phosphatase activity

cellular_component

nucleus

nuclear envelope

cytoplasm

protein amino acid dephosphorylation

calcium-activated potassium channel activity

hydrolase activity

phosphatase activity

Fructose and mannose metabolism

Thiamine metabolism

Riboflavin metabolism

Metabolic pathways

208495_at 0.184 2.803 2.626 1.892e-02 0.217 -3.303 TLX3 T-cell leukemia homeobox 3 5 170668892 NM_021025 5q35.1 Hs.249125 19

neuron migration

regulation of respiratory gaseous exchange by neurological system process

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

central nervous system development

respiratory gaseous exchange

sequence-specific DNA binding

negative regulation of neuron differentiation

neuron fate specification

 
233119_at 0.320 4.943 2.626 1.892e-02 0.217 -3.303 PRR5L proline rich 5 like 11 36274300, 36354110, 36379122 AV732741 11p13-p12 Hs.19987 4    
213983_s_at -0.358 4.235 -2.626 1.893e-02 0.217 -3.303 PDS5A PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) 4 -39575985, -39500877, -39500877 AW991219 4p14 Hs.331431 11

chromatin

nucleus

cell cycle

mitosis

identical protein binding

cell division

 
227105_at -0.597 5.842 -2.625 1.895e-02 0.217 -3.304 CSPP1 centrosome and spindle pole associated protein 1 8 68139156 AI400587 8q13.1-q13.2 Hs.370147 6

centrosome

microtubule

 
207718_x_at 0.281 4.390 2.625 1.896e-02 0.217 -3.304 CYP2A7 cytochrome P450, family 2, subfamily A, polypeptide 7 19 -46073183 NM_000764 19q13.2 Hs.250615 13

endoplasmic reticulum

microsome

electron carrier activity

membrane

oxygen binding

heme binding

metal ion binding

oxidation reduction

aromatase activity

Caffeine metabolism

Retinol metabolism

Drug metabolism - cytochrome P450

Drug metabolism - other enzymes

Metabolic pathways

201831_s_at -0.619 8.187 -2.625 1.897e-02 0.217 -3.305 USO1 USO1 homolog, vesicle docking protein (yeast) 4 76868852 BE875592 4q21.1 Hs.292689 34

Golgi membrane

protein binding

cytoplasm

microsome

Golgi apparatus

cytosol

intracellular protein transport

protein transporter activity

membrane

vesicle-mediated transport

vesicle fusion with Golgi apparatus

perinuclear region of cytoplasm

 
213014_at 0.260 4.667 2.625 1.897e-02 0.217 -3.305 MAPK8IP1 mitogen-activated protein kinase 8 interacting protein 1 11 45863777 BG222394 11p12-p11.2 Hs.234249 46

protein kinase inhibitor activity

MAP-kinase scaffold activity

protein binding

nucleus

cytoplasm

vesicle-mediated transport

kinesin binding

protein kinase binding

regulation of JNK cascade

perinuclear region of cytoplasm

MAPK signaling pathway

243428_at 0.316 4.494 2.625 1.898e-02 0.217 -3.305 KCNQ1OT1 KCNQ1 overlapping transcript 1 (non-protein coding) 11 -2618343 AW613101 11p15 Hs.647285 Hs.655148 25    
225814_at -0.351 8.189 -2.624 1.900e-02 0.217 -3.306 XRN1 5'-3' exoribonuclease 1 3 -143508138 BG534738 3q23 Hs.435103 12

DNA binding

RNA binding

protein binding

intracellular

cytoplasm

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

5'-3' exonuclease activity

hydrolase activity

RNA degradation

211875_x_at 0.208 4.556 2.624 1.900e-02 0.217 -3.306 PCDHGA10 protocadherin gamma subfamily A, 10 5 140772926, 140772926 AF152503 5q31 Hs.368160 6

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

 
1556180_at 0.349 6.282 2.623 1.903e-02 0.218 -3.308 LOC729678 hypothetical protein LOC729678 5 180189564 BE646146 5q35.3 Hs.348292 Hs.655606 3    
207209_at -0.249 4.464 -2.623 1.905e-02 0.218 -3.308 CETN1 centrin, EF-hand protein, 1 18 570368 NM_004066 18p11.32 Hs.122511 8

calcium ion binding

centrosome

spindle pole body

cytoskeleton

cell cycle

mitosis

mitotic centrosome separation

G-protein beta/gamma-subunit binding

photoreceptor connecting cilium

cellular response to heat

cell division

 
230061_at 0.542 5.489 2.623 1.905e-02 0.218 -3.309 TM4SF18 transmembrane 4 L six family member 18 3 -150521544 AW338625 3q25.1 Hs.22026 3

membrane

integral to membrane

 
210094_s_at -0.294 7.207 -2.622 1.906e-02 0.218 -3.309 PARD3 par-3 partitioning defective 3 homolog (C. elegans) 10 -34440102 AF196186 10p11.21 Hs.131489 40

protein binding

cytoplasm

plasma membrane

tight junction

tight junction

cell cortex

protein complex assembly

cell cycle

establishment or maintenance of cell polarity

activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway

axonogenesis

asymmetric cell division

cell junction

Chemokine signaling pathway

Neuroactive ligand-receptor interaction

Endocytosis

Adherens junction

Tight junction

1570035_at 0.327 3.708 2.622 1.908e-02 0.218 -3.310 TBC1D10A TBC1 domain family, member 10A 22 -29017978 BC007908 22q12.1-qter Hs.655273 13

Rab GTPase activator activity

protein binding

intracellular

microvillus

biological_process

PDZ domain binding

regulation of Rab GTPase activity

 
204765_at 0.260 4.799 2.622 1.909e-02 0.218 -3.311 ARHGEF5 Rho guanine nucleotide exchange factor (GEF) 5 7 143683421 NM_005435 7q33-q35 Hs.334 Hs.534621 12

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

protein binding

GTP binding

intracellular

intracellular signaling cascade

regulation of Rho protein signal transduction

 
216053_x_at 0.239 4.612 2.621 1.910e-02 0.218 -3.311 FAM182A family with sequence similarity 182, member A 20 25983249 AI143919 20p11.1 Hs.662381 3    
244730_x_at 0.299 6.783 2.621 1.911e-02 0.218 -3.312 LOC100129195 hypothetical protein LOC100129195 6   BF671528 6p22.1 Hs.659413      
202190_at 0.509 5.919 2.621 1.912e-02 0.218 -3.312 CSTF1 cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa 20 54400833, 54400980, 54401113 NM_001324 20q13.2 Hs.172865 19

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

mRNA polyadenylation

mRNA cleavage

 
218458_at -0.479 5.670 -2.620 1.914e-02 0.218 -3.313 GMCL1 germ cell-less homolog 1 (Drosophila) 2 69910321 NM_022471 2p13.3 Hs.293971 7

protein binding

nucleus

nuclear envelope

multicellular organismal development

spermatogenesis

nuclear matrix

cell differentiation

regulation of transcription

 
212688_at -0.370 7.969 -2.620 1.915e-02 0.218 -3.313 PIK3CB phosphoinositide-3-kinase, catalytic, beta polypeptide 3 -139856920 BC003393 3q22.3 Hs.239818 58

nucleotide binding

activation of MAPK activity

regulation of cell-matrix adhesion

inositol or phosphatidylinositol kinase activity

ATP binding

cytosol

phosphoinositide 3-kinase complex

cellular calcium ion homeostasis

chemotaxis

homophilic cell adhesion

signal transduction

G-protein coupled receptor protein signaling pathway

1-phosphatidylinositol-3-kinase activity

transferase activity

phosphotransferase activity, alcohol group as acceptor

platelet activation

embryonic cleavage

insulin receptor substrate binding

phosphoinositide phosphorylation

phosphatidylinositol-4,5-bisphosphate 3-kinase activity

phosphoinositide-mediated signaling

Inositol phosphate metabolism

ErbB signaling pathway

Chemokine signaling pathway

Phosphatidylinositol signaling system

mTOR signaling pathway

Apoptosis

VEGF signaling pathway

Focal adhesion

Toll-like receptor signaling pathway

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Insulin signaling pathway

Type II diabetes mellitus

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Chronic myeloid leukemia

Acute myeloid leukemia

Small cell lung cancer

Non-small cell lung cancer

212430_at -0.543 7.854 -2.619 1.918e-02 0.218 -3.315 RBM38 RNA binding motif protein 38 20 55399869 AL109955 20q13.31 Hs.236361 6

nucleotide binding

mRNA 3'-UTR binding

nucleus

cytoplasm

cytosol

mRNA processing

DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest

DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator

cell cycle

regulation of RNA splicing

protein stabilization

 
204740_at -0.322 6.533 -2.619 1.918e-02 0.218 -3.315 CNKSR1 connector enhancer of kinase suppressor of Ras 1 1 26376567, 26376568 NM_006314 1p36.11 Hs.16232 17

cytoplasm

plasma membrane

cell-cell junction

cell cortex

transmembrane receptor protein tyrosine kinase signaling pathway

Rho protein signal transduction

protein binding, bridging

 
209901_x_at 0.304 5.638 2.618 1.922e-02 0.219 -3.317 AIF1 allograft inflammatory factor 1 6 31690972, 31691011, 31691767, 3029118, 3029157, 3029913, 2830581, 2830620, 2831376 U19713 6p21.3 Hs.76364 38

calcium ion binding

nucleus

response to stress

inflammatory response

cell cycle arrest

negative regulation of cell proliferation

 
218031_s_at -0.432 8.265 -2.618 1.923e-02 0.219 -3.317 FOXN3 forkhead box N3 14 -88692268, -88692268 NM_018589 14q31.3 Hs.434286 Hs.621371 16

DNA damage checkpoint

G2 phase of mitotic cell cycle

transcription factor activity

nucleus

cell cycle

protein C-terminus binding

transcription repressor activity

sequence-specific DNA binding

negative regulation of transcription, DNA-dependent

 
200740_s_at -0.240 9.325 -2.618 1.924e-02 0.219 -3.318 SUMO3 SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae) 21 -45049959 NM_006936 21q22.3 Hs.474005 40

kinetochore

protein binding

cytoplasm

protein sumoylation

modification-dependent protein catabolic process

 
1555783_x_at 0.239 5.164 2.617 1.927e-02 0.219 -3.319 PQLC2 PQ loop repeat containing 2 1 19511326 BC015324 1p36.13 Hs.647620 5

membrane

integral to membrane

 
228845_at 0.205 6.076 2.617 1.928e-02 0.219 -3.320 PLBD2 phospholipase B domain containing 2 12 112280753 AW451356 12q24.13 Hs.115896 4

lipid catabolic process

hydrolase activity

lysosomal lumen

 
224964_s_at 0.481 5.830 2.616 1.932e-02 0.219 -3.321 GNG2 guanine nucleotide binding protein (G protein), gamma 2 14 51396799 AK026424 14q21 Hs.187772 Hs.709082 Hs.713545 31

signal transducer activity

Golgi apparatus

heterotrimeric G-protein complex

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

cell proliferation

hormone-mediated signaling

Chemokine signaling pathway

225208_s_at -0.250 7.809 -2.615 1.936e-02 0.220 -3.323 FAM103A1 family with sequence similarity 103, member A1 15 81445998 AW575350 15q25.2 Hs.80624 3    
212835_at -0.535 6.466 -2.614 1.937e-02 0.220 -3.324 FAM175B family with sequence similarity 175, member B 10 126480343 AA777641 10q26.13 Hs.280695 10

protein binding

polyubiquitin binding

BRISC complex

 
221766_s_at -0.358 6.569 -2.614 1.937e-02 0.220 -3.324 FAM46A family with sequence similarity 46, member A 6 -82512165 AW246673 6q14 Hs.10784 11    
200901_s_at -0.268 7.125 -2.614 1.937e-02 0.220 -3.324 M6PR mannose-6-phosphate receptor (cation dependent) 12 -8984230 NM_002355 12p13 Hs.134084 31

transmembrane receptor activity

protein binding

mannose binding

lysosome

late endosome

integral to plasma membrane

transport

receptor-mediated endocytosis

endosome to lysosome transport

cell surface

mannose transmembrane transporter activity

mannose transport

membrane

Lysosome

220253_s_at -0.694 5.164 -2.614 1.937e-02 0.220 -3.324 LRP12 low density lipoprotein-related protein 12 8 -105570642 NM_013437 8q22.2-q23.1 Hs.600630 8

receptor activity

low-density lipoprotein receptor activity

protein binding

nucleolus

cytoplasm

plasma membrane

integral to plasma membrane

coated pit

endocytosis

signal transduction

regulation of growth

 
219133_at 0.265 8.022 2.614 1.938e-02 0.220 -3.324 OXSM 3-oxoacyl-ACP synthase, mitochondrial 3 25806566 NM_017897 3p24.2 Hs.55781 Hs.719350 7

3-oxoacyl-[acyl-carrier-protein] synthase activity

mitochondrion

acyl-CoA metabolic process

acyltransferase activity

transferase activity

short-chain fatty acid biosynthetic process

medium-chain fatty acid biosynthetic process

Fatty acid biosynthesis

Metabolic pathways

223136_at 0.556 7.015 2.614 1.939e-02 0.220 -3.325 AIG1 androgen-induced 1 6 143423715 AF151861 6q24.2 Hs.567501 8

membrane

integral to membrane

 
200769_s_at -0.435 6.068 -2.613 1.940e-02 0.220 -3.325 MAT2A methionine adenosyltransferase II, alpha 2 85619798 NM_005911 2p11.2 Hs.516157 18

nucleotide binding

magnesium ion binding

methionine adenosyltransferase activity

protein binding

ATP binding

S-adenosylmethionine biosynthetic process

one-carbon metabolic process

circadian rhythm

response to light stimulus

response to hormone stimulus

transferase activity

potassium ion binding

response to drug

cobalt ion binding

response to cAMP

Cysteine and methionine metabolism

Selenoamino acid metabolism

Biosynthesis of plant hormones

Metabolic pathways

209879_at 0.325 5.698 2.613 1.942e-02 0.220 -3.326 SELPLG selectin P ligand 12 -107539808 AI741056 12q24 Hs.591014 100

receptor binding

membrane fraction

integral to plasma membrane

cell adhesion

bacterial binding

membrane

leukocyte tethering or rolling

Cell adhesion molecules (CAMs)

208860_s_at -0.397 7.456 -2.613 1.943e-02 0.220 -3.326 ATRX alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) X -76647011 U09820 Xq13.1-q21.1 Hs.533526 Hs.645562 Hs.653797 66

nucleotide binding

DNA binding

DNA helicase activity

protein binding

ATP binding

nucleus

nuclear heterochromatin

DNA repair

DNA methylation

DNA recombination

regulation of transcription, DNA-dependent

response to DNA damage stimulus

zinc ion binding

hydrolase activity

metal ion binding

 
213159_at 0.267 5.515 2.613 1.943e-02 0.220 -3.327 PCNX pecanex homolog (Drosophila) 14 70443874 AB018348 14q24.2 Hs.446559 10

membrane

integral to membrane

 
226017_at 0.320 6.648 2.612 1.944e-02 0.220 -3.327 CMTM7 CKLF-like MARVEL transmembrane domain containing 7 3 32408166 AI708432 3p22.3 Hs.440494 4

cytokine activity

extracellular space

chemotaxis

membrane

integral to membrane

 
236320_at 0.254 3.883 2.612 1.944e-02 0.220 -3.327 CCDC17 coiled-coil domain containing 17 1 -45858302 AA010540 1p34.1 Hs.18912 3    
232067_at 0.321 3.182 2.612 1.945e-02 0.220 -3.328 C6orf168 chromosome 6 open reading frame 168 6 -99827513 BC004869 6q16.2 Hs.573245 5

mitochondrial outer membrane

protein targeting to mitochondrion

 
227442_at 0.244 6.930 2.611 1.948e-02 0.220 -3.329 COX18 COX18 cytochrome c oxidase assembly homolog (S. cerevisiae) 4 -74139279 BG283902 4q13.3 Hs.356697 5

mitochondrion

mitochondrial inner membrane

respiratory chain complex IV assembly

protein transporter activity

membrane

integral to membrane

integral to mitochondrial inner membrane

protein insertion into mitochondrial membrane

 
235252_at -0.436 7.537 -2.611 1.949e-02 0.220 -3.329 KSR1 kinase suppressor of ras 1 17 22823162 AI090141 17q11.1-q11.2 Hs.133534 15

protein serine/threonine kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

intracellular

cytoplasm

protein amino acid phosphorylation

intracellular signaling cascade

Ras protein signal transduction

zinc ion binding

membrane

diacylglycerol binding

metal ion binding

 
226331_at -0.237 7.064 -2.611 1.949e-02 0.220 -3.329 BBX bobby sox homolog (Drosophila) 3 108724472 BF508813 3q13.1 Hs.124366 11

DNA binding

nucleus

regulation of transcription

 
219365_s_at 0.278 5.565 2.611 1.949e-02 0.220 -3.329 CAMKV CaM kinase-like vesicle-associated 3 -49870425 NM_024046 3p21.31 Hs.145156 10

protein serine/threonine kinase activity

ATP binding

plasma membrane

protein amino acid phosphorylation

cytoplasmic vesicle

 
203555_at 0.193 6.307 2.611 1.950e-02 0.220 -3.330 PTPN18 protein tyrosine phosphatase, non-receptor type 18 (brain-derived) 2 130830049 NM_014369 2q21.1 Hs.516390 Hs.591549 16

non-membrane spanning protein tyrosine phosphatase activity

nucleus

cytoplasm

protein amino acid dephosphorylation

hydrolase activity

 
213870_at 0.294 5.566 2.611 1.951e-02 0.220 -3.330 COL11A2 collagen, type XI, alpha 2 6 -33262201, -33238446, -4534386, -4510632, -4340391, -4316638 AL031228 6p21.3 Hs.390171 39

extracellular region

collagen

collagen type XI

cell adhesion

sensory perception of sound

extracellular matrix structural constituent conferring tensile strength

collagen fibril organization

protein binding, bridging

cartilage development

soft palate development

Focal adhesion

ECM-receptor interaction

34260_at 0.241 6.099 2.610 1.952e-02 0.220 -3.331 TELO2 TEL2, telomere maintenance 2, homolog (S. cerevisiae) 16 1483352 AB014583 16p13.3 Hs.271044 13

chromosome, telomeric region

protein binding

intracellular

nucleus

chromosome

cytoplasm

membrane

 
204075_s_at -0.400 6.299 -2.610 1.953e-02 0.220 -3.331 KIAA0562 KIAA0562 1 -3721203 NM_014704 1p36.32 Hs.133089 Hs.509017 6

binding

 
203804_s_at -0.265 8.942 -2.610 1.953e-02 0.220 -3.331 LUC7L3 LUC7-like 3 (S. cerevisiae) 17 46151975 NM_006107 17q21.33 Hs.130293 15

DNA binding

mRNA binding

protein binding

nucleus

mRNA processing

apoptosis

response to stress

RNA splicing

nuclear speck

 
216064_s_at -0.515 5.354 -2.610 1.953e-02 0.220 -3.331 AGA aspartylglucosaminidase 4 -178588917 W27131 4q32-q33 Hs.207776 36

N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity

lysosome

protein deglycosylation

hydrolase activity

protein maturation

Other glycan degradation

Lysosome

209109_s_at 0.320 5.904 2.610 1.954e-02 0.220 -3.332 TSPAN6 tetraspanin 6 X -99770450 U84895 Xq22 Hs.43233 10

signal transducer activity

membrane

integral to membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

 
201663_s_at -0.464 4.686 -2.610 1.954e-02 0.220 -3.332 SMC4 structural maintenance of chromosomes 4 3 161600123, 161601040 NM_005496 3q26.1 Hs.58992 14

nucleotide binding

condensin complex

condensin complex

protein binding

ATP binding

nucleus

chromosome

cytoplasm

cell cycle

mitotic chromosome condensation

protein heterodimerization activity

cell division

 
230122_at 0.305 3.275 2.610 1.955e-02 0.220 -3.332 MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 10 21863107, 21863579 BE219716 10p12 Hs.30385 19

transcription factor activity

protein binding

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
205795_at 0.272 3.553 2.610 1.955e-02 0.220 -3.332 NRXN3 neurexin 3 14 77939845, 78815406 NM_004796 14q31 Hs.368307 20

receptor activity

calcium ion binding

protein binding

integral to plasma membrane

cell adhesion

axon guidance

membrane

integral to membrane

Cell adhesion molecules (CAMs)

223436_s_at 0.638 8.773 2.610 1.955e-02 0.220 -3.332 TRPT1 tRNA phosphotransferase 1 11 -63747847, -63747847 BC005133 11q13.1 Hs.326586 6

tRNA 2'-phosphotransferase activity

tRNA splicing, via endonucleolytic cleavage and ligation

transferase activity, transferring phosphorus-containing groups

 
212343_at -0.386 6.766 -2.609 1.956e-02 0.220 -3.333 YIPF6 Yip1 domain family, member 6 X 67635610 AL117461 Xq12 Hs.700646 Hs.82719 10

endoplasmic reticulum

membrane

integral to membrane

 
202829_s_at -0.315 7.722 -2.609 1.959e-02 0.221 -3.334 VAMP7 vesicle-associated membrane protein 7 X, Y 154764140, 57623340 NM_005638 Xq28 Yq12 Hs.24167 38

protein binding

protein binding

lysosomal membrane

endosome

endoplasmic reticulum

endoplasmic reticulum membrane

Golgi apparatus

ER to Golgi vesicle-mediated transport

vesicle fusion

phagocytosis, engulfment

endosome to lysosome transport

protein transport

membrane

integral to membrane

calcium ion-dependent exocytosis

SNARE complex

cytoplasmic vesicle

late endosome membrane

eosinophil degranulation

neutrophil degranulation

apical part of cell

phagocytic vesicle

SNARE interactions in vesicular transport

213298_at -0.590 5.938 -2.608 1.959e-02 0.221 -3.334 NFIC nuclear factor I/C (CCAAT-binding transcription factor) 19 3310615, 3317572 X12492 19p13.3 Hs.170131 23

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

intracellular

nucleus

DNA replication

regulation of transcription, DNA-dependent

positive regulation of transcription from RNA polymerase II promoter

 
228059_x_at 0.273 8.686 2.608 1.960e-02 0.221 -3.334 MRPS22 mitochondrial ribosomal protein S22 3 140545550 BF594653 3q23 Hs.75724 13

molecular_function

structural constituent of ribosome

protein binding

mitochondrion

mitochondrial small ribosomal subunit

ribosome

biological_process

 
208606_s_at -0.322 4.531 -2.608 1.961e-02 0.221 -3.335 WNT4 wingless-type MMTV integration site family, member 4 1 -22316384 NM_030761 1p36.23-p35.1 Hs.25766 35

signal transducer activity

extracellular matrix structural constituent

extracellular region

proteinaceous extracellular matrix

Wnt receptor signaling pathway, calcium modulating pathway

cell-cell signaling

multicellular organismal development

Wnt signaling pathway

Hedgehog signaling pathway

Melanogenesis

Pathways in cancer

Basal cell carcinoma

210610_at 0.213 5.710 2.608 1.963e-02 0.221 -3.336 CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 19 -47703297 M69176 19q13.2 Hs.512682 97

angiogenesis

molecular_function

extracellular region

membrane fraction

plasma membrane

plasma membrane

integral to plasma membrane

homophilic cell adhesion

integrin-mediated signaling pathway

cell migration

 
223989_s_at 0.346 6.989 2.607 1.964e-02 0.221 -3.336 REXO2 REX2, RNA exonuclease 2 homolog (S. cerevisiae) 11 113815317 BC003502 11q23.1-q23.2 Hs.677190 Hs.7527 15

nucleic acid binding

intracellular

nucleus

mitochondrion

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

3'-5' exonuclease activity

nucleotide metabolic process

hydrolase activity

manganese ion binding

 
235035_at -0.253 5.453 -2.607 1.964e-02 0.221 -3.336 SLC35E1 solute carrier family 35, member E1 19 -16521647 BF342223 19p13.11 Hs.620596 5

transport

membrane

integral to membrane

 
211896_s_at 0.582 9.506 2.607 1.964e-02 0.221 -3.336 DCN decorin 12 -90063165, -90063165, -90063165 AF138302 12q21.33 Hs.718429 104

protein binding

glycosaminoglycan binding

extracellular region

proteinaceous extracellular matrix

organ morphogenesis

peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan

extracellular matrix binding

TGF-beta signaling pathway

207761_s_at -0.807 9.495 -2.607 1.964e-02 0.221 -3.336 METTL7A methyltransferase like 7A 12 49604800 NM_014033 12q13.12 Hs.711113 Hs.716437 6

metabolic process

methyltransferase activity

transferase activity

 
227406_at 0.368 6.757 2.607 1.965e-02 0.221 -3.337 LOC100129387 hypothetical LOC100129387 15 48433662 AI286203 15q21.2 Hs.659360 1    
201869_s_at 0.257 5.099 2.607 1.966e-02 0.221 -3.337 TBL1X transducin (beta)-like 1X-linked X 9391334, 9393200 BF593932 Xp22.3 Hs.495656 16

nucleus

signal transduction

visual perception

sensory perception of sound

modification-dependent protein catabolic process

regulation of transcription

Wnt signaling pathway

212097_at 0.535 9.848 2.607 1.967e-02 0.221 -3.338 CAV1 caveolin 1, caveolae protein, 22kDa 7 115952074 AU147399 7q31.1 Hs.74034 318

Golgi membrane

Golgi membrane

inactivation of MAPK activity

vasculogenesis

response to hypoxia

negative regulation of endothelial cell proliferation

intracellular

endoplasmic reticulum

Golgi apparatus

lipid particle

plasma membrane

caveola

triglyceride metabolic process

calcium ion transport

endocytosis

regulation of smooth muscle contraction

skeletal muscle tissue development

protein localization

positive regulation of calcium ion transport into cytosol

cholesterol binding

integral to membrane

vesicle organization

peptidase activator activity

regulation of fatty acid metabolic process

lipid storage

regulation of blood coagulation

cholesterol transport

negative regulation of epithelial cell differentiation

mammary gland development

maintenance of protein location in cell

response to progesterone stimulus

protein complex scaffold

nitric oxide homeostasis

cholesterol homeostasis

negative regulation of MAPKKK cascade

response to estrogen stimulus

interspecies interaction between organisms

negative regulation of nitric oxide biosynthetic process

positive regulation of vasoconstriction

negative regulation of vasodilation

negative regulation of JAK-STAT cascade

perinuclear region of cytoplasm

positive regulation of metalloenzyme activity

nitric-oxide synthase binding

protein homooligomerization

cytosolic calcium ion homeostasis

response to calcium ion

membrane depolarization

regulation of peptidase activity

mammary gland involution

Focal adhesion

222597_at -0.530 4.963 -2.605 1.971e-02 0.221 -3.340 SNAP29 synaptosomal-associated protein, 29kDa 22 19543291 AI346639 22q11.21 Hs.108002 Hs.701035 19

SNAP receptor activity

cytoplasm

plasma membrane

exocytosis

vesicle targeting

membrane fusion

protein transport

synaptosome

cell junction

synapse

SNARE interactions in vesicular transport

218097_s_at 0.226 9.332 2.605 1.971e-02 0.221 -3.340 CUEDC2 CUE domain containing 2 10 -104172991 NM_024040 10q24.32 Hs.500874 6

protein binding

nucleus

cytoplasm

modification-dependent protein catabolic process

 
222993_at 0.243 9.203 2.605 1.973e-02 0.222 -3.340 MRPL37 mitochondrial ribosomal protein L37 1 54438427 AF325707 1p32.1 Hs.584908 8

structural constituent of ribosome

mitochondrion

mitochondrial ribosome

ribosome

translation

translation regulator activity

 
201074_at -0.349 6.544 -2.605 1.973e-02 0.222 -3.341 SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 3 -47602381 AA593983 3p23-p21 Hs.476179 39

chromatin

DNA binding

chromatin binding

transcription coactivator activity

intracellular

nucleus

nucleoplasm

chromatin assembly or disassembly

chromatin remodeling

regulation of transcription from RNA polymerase II promoter

protein C-terminus binding

organ morphogenesis

SWI/SNF complex

regulation of transcription

positive regulation of transcription, DNA-dependent

protein N-terminus binding

 
229438_at 0.215 5.470 2.604 1.976e-02 0.222 -3.342 LOC100132244 hypothetical protein LOC100132244 7   AK026140 7p22.3 Hs.632006      
201763_s_at 0.171 6.600 2.604 1.976e-02 0.222 -3.342 DAXX death-domain associated protein 6 -33394312, -4666475, -4472530 NM_001350 6p21.3 Hs.336916 99

cytokinesis after mitosis

heterochromatin

receptor signaling protein activity

nucleus

cytoplasm

apoptosis

activation of JUN kinase activity

induction of apoptosis via death domain receptors

transcription repressor activity

PML body

androgen receptor signaling pathway

heat shock protein binding

identical protein binding

interspecies interaction between organisms

regulation of transcription

negative regulation of transcription, DNA-dependent

protein N-terminus binding

androgen receptor binding

MAPK signaling pathway

Amyotrophic lateral sclerosis (ALS)

214683_s_at -0.510 8.242 -2.604 1.977e-02 0.222 -3.342 CLK1 CDC-like kinase 1 2 -201425977, -201425977 AI251890 2q33 Hs.433732 25

nucleotide binding

protein serine/threonine kinase activity

non-membrane spanning protein tyrosine kinase activity

ATP binding

nucleus

protein amino acid phosphorylation

cell proliferation

transferase activity

 
210635_s_at -0.465 5.033 -2.604 1.979e-02 0.222 -3.343 KLHL20 kelch-like 20 (Drosophila) 1 171950702 BC005253 1q24.1-q24.3 Hs.495035 10

actin binding

protein binding

cytoskeleton organization

cell surface

actin cytoskeleton

modification-dependent protein catabolic process

 
221474_at 0.307 10.442 2.603 1.979e-02 0.222 -3.343 MYL12B myosin, light chain 12B, regulatory 18 3252110, 3252610, 3252716 U26162 18p11.31 Hs.190086 Hs.464472 7

motor activity

calcium ion binding

myosin complex

apical part of cell

Focal adhesion

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

235126_at 0.464 5.654 2.603 1.980e-02 0.222 -3.343 LQK1 hypothetical LOC642946 1 -211096569 N51468 1q32.3 Hs.552649 1    
223043_at -0.265 10.426 -2.603 1.980e-02 0.222 -3.343 TMEM85 transmembrane protein 85 15 32304536 AF151018 15q14 Hs.250905 6

apoptosis

membrane

integral to membrane

 
210942_s_at -1.251 4.696 -2.603 1.981e-02 0.222 -3.344 ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 3 99934261 AB022918 3q12.1 Hs.148716 5

Golgi apparatus

amino sugar metabolic process

protein amino acid glycosylation

glycolipid metabolic process

sialyltransferase activity

protein lipoylation

membrane

integral to membrane

integral to Golgi membrane

Glycosphingolipid biosynthesis - lacto and neolacto series

Metabolic pathways

203980_at 0.930 9.897 2.603 1.981e-02 0.222 -3.344 FABP4 fatty acid binding protein 4, adipocyte 8 -82553286 NM_001442 8q21 Hs.391561 44

cytokine production

transporter activity

fatty acid binding

protein binding

soluble fraction

nucleus

cytoplasm

cytosol

negative regulation of protein kinase activity

fatty acid metabolic process

transport

positive regulation of cell proliferation

negative regulation of transcription

transcription repressor activity

response to drug

cholesterol homeostasis

positive regulation of inflammatory response

white fat cell differentiation

brown fat cell differentiation

response to glucocorticoid stimulus

PPAR signaling pathway

224695_at -0.301 7.231 -2.603 1.982e-02 0.222 -3.345 C2orf29 chromosome 2 open reading frame 29 2 101235776 AK024221 2q11.2 Hs.715598 5

molecular_function

cellular_component

cell proliferation

 
225723_at 0.385 6.572 2.603 1.982e-02 0.222 -3.345 C6orf129 chromosome 6 open reading frame 129 6 -37558674 BE794699 6p21.2 Hs.284207 3

membrane

integral to membrane

 
212946_at -0.340 9.150 -2.602 1.983e-02 0.222 -3.345 KIAA0564 KIAA0564 13 -41191472, -41038960 AK025432 13q14.11 Hs.368282 4

nucleotide binding

ATP binding

extracellular region

ATPase activity

 
206101_at 0.591 7.260 2.602 1.984e-02 0.222 -3.345 ECM2 extracellular matrix protein 2, female organ and adipocyte specific 9 -94297419 NM_001393 9q22.3 Hs.117060 9

integrin binding

protein binding

extracellular region

proteinaceous extracellular matrix

cell-matrix adhesion

 
205421_at -1.530 5.330 -2.602 1.984e-02 0.222 -3.346 SLC22A3 solute carrier family 22 (extraneuronal monoamine transporter), member 3 6 160689414 NM_021977 6q26-q27 Hs.567337 33

transporter activity

protein binding

membrane fraction

integral to plasma membrane

ion transport

ion transmembrane transporter activity

quaternary ammonium group transmembrane transporter activity

quaternary ammonium group transport

monoamine transport

membrane

regulation of appetite

histamine uptake

 
238583_at -0.502 6.923 -2.602 1.985e-02 0.222 -3.346 MSRB3 methionine sulfoxide reductase B3 12 63958754 BG023974 12q14.3 Hs.339024 6

mitochondrion

endoplasmic reticulum

peptide-methionine-(S)-S-oxide reductase activity

zinc ion binding

oxidoreductase activity

metal ion binding

oxidation reduction

 
217729_s_at -0.336 8.376 -2.602 1.986e-02 0.222 -3.346 AES amino-terminal enhancer of split 19 -3003907, -3003907 NM_001130 19p13.3 Hs.515053 24

skeletal system development

transcription corepressor activity

protein binding

nucleus

regulation of transcription from RNA polymerase II promoter

multicellular organismal development

organ morphogenesis

negative regulation of specific transcription from RNA polymerase II promoter

Wnt receptor signaling pathway

negative regulation of transcription

transcription regulator activity

cellular response to extracellular stimulus

negative regulation of protein binding

regulation of growth

negative regulation of response to cytokine stimulus

response to interleukin-1

 
226333_at -0.687 7.149 -2.602 1.986e-02 0.222 -3.346 IL6R interleukin 6 receptor 1 152644292 AV700030 1q21 Hs.709210 132

hepatic immune response

monocyte chemotaxis

positive regulation of leukocyte chemotaxis

receptor activity

ciliary neurotrophic factor receptor activity

interleukin-6 receptor activity

receptor binding

extracellular region

plasma membrane

interleukin-6 receptor complex

acute-phase response

integral to membrane

apical plasma membrane

enzyme binding

endocrine pancreas development

endocrine pancreas development

positive regulation of chemokine production

positive regulation of interleukin-6 production

response to cytokine stimulus

positive regulation of tyrosine phosphorylation of Stat3 protein

protein homodimerization activity

regulation of apoptosis

positive regulation of osteoblast differentiation

positive regulation of anti-apoptosis

positive regulation of smooth muscle cell proliferation

positive regulation of peptidyl-tyrosine phosphorylation

defense response to Gram-negative bacterium

interleukin-6-mediated signaling pathway

ciliary neurotrophic factor binding

ciliary neurotrophic factor-mediated signaling pathway

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

Hematopoietic cell lineage

214520_at 0.366 3.767 2.602 1.986e-02 0.222 -3.346 FOXC2 forkhead box C2 (MFH-1, mesenchyme forkhead 1) 16 85158357 NM_005251 16q22-q24 Hs.436448 45

skeletal system development

ossification

blood vessel development

patterning of blood vessels

ureteric bud development

lymphangiogenesis

blood vessel remodeling

heart morphogenesis

RNA polymerase II transcription factor activity, enhancer binding

nucleus

nucleus

anti-apoptosis

Notch signaling pathway

multicellular organismal development

mesoderm development

cell proliferation

insulin receptor signaling pathway

response to hormone stimulus

neural crest cell development

transcription activator activity

collagen fibril organization

chromatin DNA binding

embryonic heart tube development

camera-type eye development

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

regulation of organ growth

vascular endothelial growth factor receptor signaling pathway

paraxial mesoderm formation

paraxial mesodermal cell fate commitment

cell development

embryonic viscerocranium morphogenesis

artery morphogenesis

regulation of blood vessel size

ventricular cardiac muscle morphogenesis

cardiac muscle cell proliferation

 
216344_at 0.230 4.282 2.601 1.988e-02 0.222 -3.347 NPHP4 nephronophthisis 4 1 -5845456 AL117405 1p36.22 Hs.462348 13

structural molecule activity

protein binding

centrosome

cilium

microtubule basal body

signal transduction

visual behavior

membrane

cell-cell adhesion

actin cytoskeleton organization

 
231658_x_at 0.176 2.897 2.601 1.989e-02 0.222 -3.348 RPL36 ribosomal protein L36 19 5641271, 5641345 BG151154 19p13.3 Hs.408018 19

structural constituent of ribosome

protein binding

intracellular

nucleolus

cytosol

ribosome

translational elongation

cytosolic large ribosomal subunit

Ribosome

212653_s_at 0.280 7.281 2.601 1.990e-02 0.222 -3.348 EHBP1 EH domain binding protein 1 2 62754516, 62786504, 62787535 AB020710 2p15 Hs.271667 13

cytoplasm

membrane

 
209518_at 0.231 7.331 2.601 1.991e-02 0.222 -3.348 SMARCD1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 12 48765249 AI869240 12q13-q14 Hs.79335 23

transcription coactivator activity

nucleus

nucleoplasm

nucleolus

regulation of transcription from RNA polymerase II promoter

SWI/SNF complex

chromatin remodeling complex

protein complex scaffold

chromatin-mediated maintenance of transcription

 
225238_at -0.704 6.014 -2.601 1.991e-02 0.222 -3.348 MSI2 musashi homolog 2 (Drosophila) 17 52688929, 52689372 BF435123 17q22 Hs.658922 7

nucleotide binding

RNA binding

cytoplasm

 
202569_s_at -0.328 7.347 -2.601 1.991e-02 0.222 -3.348 MARK3 MAP/microtubule affinity-regulating kinase 3 14 102921453 NM_002376 14q32.3 Hs.35828 24

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

transferase activity

 
235760_at 0.364 5.317 2.601 1.991e-02 0.222 -3.349 NSD1 nuclear receptor binding SET domain protein 1 5 176492685, 176493438 AI421972 5q35.2-q35.3 Hs.106861 36

negative regulation of transcription from RNA polymerase II promoter

chromatin binding

transcription corepressor activity

protein binding

nucleus

methyltransferase activity

zinc ion binding

chromatin modification

histone methylation

transferase activity

ligand-dependent nuclear receptor binding

estrogen receptor binding

histone methyltransferase activity (H4-K20 specific)

regulation of transcription

positive regulation of transcription, DNA-dependent

metal ion binding

retinoid X receptor binding

thyroid hormone receptor binding

histone methyltransferase activity (H3-K36 specific)

androgen receptor binding

Lysine degradation

209528_s_at 0.294 6.836 2.600 1.991e-02 0.222 -3.349 TELO2 TEL2, telomere maintenance 2, homolog (S. cerevisiae) 16 1483352 AL137394 16p13.3 Hs.271044 13

chromosome, telomeric region

protein binding

intracellular

nucleus

chromosome

cytoplasm

membrane

 
218815_s_at 0.207 5.326 2.600 1.992e-02 0.222 -3.349 TMEM51 transmembrane protein 51 1 15351614, 15352815 NM_018022 1p36.21 Hs.465305 5

membrane

integral to membrane

 
225468_at -0.336 6.753 -2.600 1.992e-02 0.222 -3.349 PATL1 protein associated with topoisomerase II homolog 1 (yeast) 11 -59160767 AI761804 11q12.1 Hs.591960 8

cytoplasmic mRNA processing body

cytoplasm

RNA degradation

1554171_at 0.330 4.407 2.600 1.993e-02 0.222 -3.350 ZMYM3 zinc finger, MYM-type 3 X -70376198, -70376198 BC013009 Xq13.1 Hs.522684 12

DNA binding

nucleus

nucleolus

cytoplasm

multicellular organismal development

zinc ion binding

metal ion binding

 
213334_x_at 0.233 5.869 2.600 1.993e-02 0.222 -3.350 HAUS7 HAUS augmin-like complex, subunit 7 X -152366317, -152366317 BE676218 Xq28 Hs.170835 16

protein binding

centrosome

spindle

microtubule

cell cycle

mitosis

thioesterase binding

cell division

HAUS complex

 
225048_at -0.452 8.776 -2.600 1.993e-02 0.222 -3.350 PHF10 PHD finger protein 10 6 -169845925 AI818048 6q27 Hs.435933 14

protein binding

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
228066_at 0.291 6.423 2.600 1.993e-02 0.222 -3.350 C17orf96 chromosome 17 open reading frame 96 17 -34081484 AI870951 17q12 Hs.445574 Hs.633923 1    
215242_at -0.314 4.111 -2.600 1.995e-02 0.222 -3.350 PIGC phosphatidylinositol glycan anchor biosynthesis, class C 1 -170677219 AL035301 1q23-q25 Hs.188456 12

endoplasmic reticulum

endoplasmic reticulum membrane

membrane

integral to membrane

preassembly of GPI anchor in ER membrane

transferase activity, transferring glycosyl groups

phosphatidylinositol N-acetylglucosaminyltransferase activity

Glycosylphosphatidylinositol(GPI)-anchor biosynthesis

Metabolic pathways

216061_x_at 0.301 6.802 2.599 1.995e-02 0.222 -3.350 PDGFB platelet-derived growth factor beta polypeptide (simian sarcoma viral (v-sis) oncogene homolog) 22 -37949632, -37949632 AU150748 22q12.3-q13.1 22q13.1 Hs.1976 140

response to hypoxia

positive regulation of endothelial cell proliferation

monocyte chemotaxis

platelet-derived growth factor receptor binding

collagen binding

extracellular region

extracellular region

cytoplasm

substrate-bound cell migration

transforming growth factor beta receptor signaling pathway

growth factor activity

response to wounding

cell surface

negative regulation of phosphatidylinositol biosynthetic process

negative regulation of platelet activation

positive regulation of smooth muscle cell migration

membrane

cell growth

cell projection assembly

actin cytoskeleton organization

negative regulation of cell migration

platelet dense granule lumen

protein homodimerization activity

positive regulation of MAP kinase activity

cell surface binding

positive regulation of blood vessel endothelial cell migration

positive regulation of DNA replication

protein heterodimerization activity

platelet-derived growth factor receptor signaling pathway

positive regulation of fibroblast proliferation

platelet-derived growth factor binding

regulation of peptidyl-tyrosine phosphorylation

positive regulation of chemotaxis

cell chemotaxis

MAPK signaling pathway

Cytokine-cytokine receptor interaction

Focal adhesion

Gap junction

Regulation of actin cytoskeleton

Pathways in cancer

Renal cell carcinoma

Glioma

Prostate cancer

Melanoma

204872_at -0.560 7.931 -2.599 1.995e-02 0.222 -3.351 TLE4 transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) 9 81376697 NM_007005 9q21.31 Hs.444213 12

molecular_function

nucleus

biological_process

Wnt receptor signaling pathway

regulation of transcription

 
217852_s_at -0.459 8.728 -2.599 1.996e-02 0.222 -3.351 ARL8B ADP-ribosylation factor-like 8B 3 5138929 NM_018184 3p26.1 Hs.250009 Hs.719100 10

nucleotide binding

GTPase activity

GTP binding

intracellular

cytoplasm

lysosomal membrane

endosome

chromosome segregation

small GTPase mediated signal transduction

membrane

GDP binding

midbody

late endosome membrane

alpha-tubulin binding

beta-tubulin binding

spindle midzone

 
242662_at 0.366 4.682 2.599 1.996e-02 0.222 -3.351 PCSK6 proprotein convertase subtilisin/kexin type 6 15 -99741475, -99722601, -99704469, -99670747, -99661655 AI056815 15q26.3 Hs.498494 Hs.665989 36

serine-type endopeptidase activity

calcium ion binding

extracellular region

extracellular space

soluble fraction

endoplasmic reticulum

Golgi lumen

proteolysis

heparin binding

peptidase activity

glycoprotein metabolic process

cell surface

membrane

regulation of BMP signaling pathway

extracellular matrix

nerve growth factor processing

nerve growth factor production

secretion by cell

eukaryotic cell surface binding

nerve growth factor binding

 
211505_s_at -0.306 7.395 -2.599 1.996e-02 0.222 -3.351 STAU1 staufen, RNA binding protein, homolog 1 (Drosophila) 20 -47163282 AL136601 20q13.1 Hs.596704 26

double-stranded RNA binding

protein binding

intracellular

rough endoplasmic reticulum

microtubule associated complex

intracellular mRNA localization

ribonucleoprotein complex

 
1552291_at -0.422 5.114 -2.599 1.997e-02 0.222 -3.351 PIGX phosphatidylinositol glycan anchor biosynthesis, class X 3 197923642 NM_017861 3q29 Hs.223296 6

endoplasmic reticulum

endoplasmic reticulum membrane

membrane

integral to membrane

preassembly of GPI anchor in ER membrane

Glycosylphosphatidylinositol(GPI)-anchor biosynthesis

Metabolic pathways

216309_x_at 0.191 6.609 2.599 1.997e-02 0.222 -3.352 JRK jerky homolog (mouse) 8 -143735875 AF072467 8q24.3 Hs.535903 Hs.683465 5

molecular_function

DNA binding

cellular_component

nucleus

biological_process

regulation of transcription

 
213651_at 0.248 6.539 2.598 2.000e-02 0.222 -3.353 INPP5J inositol polyphosphate-5-phosphatase J 22 29848960 AI935720 22q11.2-q13.2 Hs.517549 8

ruffle

inositol or phosphatidylinositol phosphatase activity

inositol-polyphosphate 5-phosphatase activity

cytoplasm

hydrolase activity

SH3 domain binding

Inositol phosphate metabolism

Metabolic pathways

Phosphatidylinositol signaling system

1557057_a_at 0.195 1.972 2.598 2.000e-02 0.222 -3.353 C5orf47 chromosome 5 open reading frame 47 5 173348767 AL039665 5q35.2 Hs.131469 1    
1557481_a_at -0.261 3.331 -2.598 2.001e-02 0.222 -3.353 C21orf131 chromosome 21 open reading frame 131 21 -21036784 BC042856 21q21.1 Hs.576551 Hs.639558 2    
222868_s_at 0.306 4.697 2.598 2.002e-02 0.222 -3.353 IL18BP interleukin 18 binding protein 11 71387605, 71387756, 71388310, 71388620 AI521549 11q13 Hs.591967 22

extracellular region

interleukin-18 binding

T-helper 1 type immune response

receptor antagonist activity

 
226588_at -0.328 5.799 -2.597 2.004e-02 0.222 -3.355 CWC22 CWC22 spliceosome-associated protein homolog (S. cerevisiae) 2 -180517848 AB046824 2q31.3 Hs.311363 6

RNA binding

protein binding

nucleus

spliceosomal complex

mRNA processing

RNA splicing

RNA metabolic process

regulation of nuclear mRNA splicing, via spliceosome

 
219793_at -0.475 4.376 -2.597 2.004e-02 0.222 -3.355 SNX16 sorting nexin 16 8 -82874372 NM_022133 8q21.13 Hs.492121 7

protein binding

cell communication

protein transport

phosphoinositide binding

 
208081_s_at 0.215 3.703 2.597 2.006e-02 0.222 -3.355 ZNF442 zinc finger protein 442 19 -12321184 NM_030824 19p13.2 Hs.253193 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
218378_s_at 0.273 7.029 2.597 2.006e-02 0.222 -3.355 PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 7 101823808 NM_024653 7q22.1 Hs.406395 6

double-stranded RNA binding

protein kinase inhibitor activity

protein binding

nucleus

nucleolus

negative regulation of protein kinase activity

protein kinase binding

negative regulation of phosphorylation

 
238569_at 0.257 5.076 2.597 2.006e-02 0.222 -3.356 GABBR1 gamma-aminobutyric acid (GABA) B receptor, 1 6 -29677983, -29677983, -1025320, -1025320, -827282, -827282 N45228 6p21.31 Hs.167017 66

receptor activity

G-protein coupled receptor activity

GABA-B receptor activity

protein binding

extracellular region

plasma membrane

integral to plasma membrane

signal transduction

negative regulation of adenylate cyclase activity

gamma-aminobutyric acid signaling pathway

cell junction

synapse

postsynaptic membrane

Neuroactive ligand-receptor interaction

200011_s_at 0.403 5.875 2.597 2.007e-02 0.222 -3.356 ARF3 ADP-ribosylation factor 3 12 -47616258 NM_001659 12q13 Hs.119177 Hs.715625 24

nucleotide binding

GTPase activity

GTP binding

intracellular

Golgi apparatus

small GTPase mediated signal transduction

protein transport

vesicle-mediated transport

 
210225_x_at 0.279 6.474 2.596 2.008e-02 0.222 -3.356 LILRB3 leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3 19 -59411958 AF009635 19q13.4 Hs.631592 Hs.688335 14

transmembrane receptor activity

integral to plasma membrane

defense response

immune response

cell surface receptor linked signal transduction

membrane

B cell receptor signaling pathway

203122_at 0.266 7.758 2.596 2.008e-02 0.222 -3.356 TTC15 tetratricopeptide repeat domain 15 2 3362452 NM_016030 2p25.3 Hs.252713 4

binding

 
201939_at 0.512 5.403 2.596 2.010e-02 0.223 -3.357 PLK2 polo-like kinase 2 (Drosophila) 5 -57785566 NM_006622 5q12.1-q13.2 Hs.398157 Hs.658132 20

nucleotide binding

mitotic cell cycle

protein serine/threonine kinase activity

signal transducer activity

protein binding

ATP binding

protein amino acid phosphorylation

transferase activity

polo kinase kinase activity

positive regulation of I-kappaB kinase/NF-kappaB cascade

 
1559634_at 0.245 3.410 2.596 2.011e-02 0.223 -3.357 CHRM3 cholinergic receptor, muscarinic 3 1 237858995 AK056349 1q43 Hs.7138 72

phosphoinositide phospholipase C activity

receptor activity

G-protein coupled receptor activity

muscarinic acetylcholine receptor activity

plasma membrane

integral to plasma membrane

protein modification process

signal transduction

G-protein coupled receptor protein signaling pathway

nervous system development

digestion

cell proliferation

cell junction

synapse

postsynaptic membrane

positive regulation of smooth muscle contraction

Calcium signaling pathway

Neuroactive ligand-receptor interaction

Regulation of actin cytoskeleton

230110_at 0.373 4.377 2.595 2.011e-02 0.223 -3.358 MCOLN2 mucolipin 2 1 -85163853 AV713773 1p22 Hs.591446 6

ion channel activity

ion transport

membrane

integral to membrane

 
1554686_at -0.230 2.361 -2.595 2.012e-02 0.223 -3.358 STAU2 staufen, RNA binding protein, homolog 2 (Drosophila) 8 -74624394 BC008370 8q13-q21.1 Hs.561815 11

double-stranded RNA binding

intracellular

nucleus

nucleolus

cytoplasm

endoplasmic reticulum

microtubule

transport

 
212896_at -0.340 7.316 -2.595 2.013e-02 0.223 -3.359 SKIV2L2 superkiller viralicidic activity 2-like 2 (S. cerevisiae) 5 54639332 D29641 5q11.2 Hs.274531 19

nucleotide binding

nucleic acid binding

helicase activity

protein binding

ATP binding

nucleus

spliceosomal complex

nucleolus

mRNA processing

ATP-dependent helicase activity

RNA splicing

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

RNA degradation

212599_at -0.564 6.733 -2.595 2.013e-02 0.223 -3.359 AUTS2 autism susceptibility candidate 2 7 68701840, 68701841, 68701841 AK025298 7q11.22 Hs.654801 Hs.712991 13

molecular_function

cellular_component

biological_process

 
205038_at 0.302 3.915 2.595 2.013e-02 0.223 -3.359 IKZF1 IKAROS family zinc finger 1 (Ikaros) 7 50314923 BG540504 7p13-p11.1 Hs.435949 Hs.488251 52

DNA binding

intracellular

nucleus

mesoderm development

zinc ion binding

regulation of transcription

metal ion binding

 
216044_x_at -0.633 6.107 -2.595 2.014e-02 0.223 -3.359 FAM69A family with sequence similarity 69, member A 1 -93080308 AK027146 1p22.1 Hs.180946 4

membrane

integral to membrane

 
228751_at -0.714 6.624 -2.595 2.014e-02 0.223 -3.359 CLK4 CDC-like kinase 4 5 -177962270 AW975057 5q35 Hs.406557 7

nucleotide binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

ATP binding

nucleus

transferase activity

peptidyl-tyrosine phosphorylation

protein amino acid autophosphorylation

 
228184_at -0.403 5.248 -2.594 2.015e-02 0.223 -3.360 DISP1 dispatched homolog 1 (Drosophila) 1 221168405 AK023679 1q41 Hs.528817 5

multicellular organismal development

hedgehog receptor activity

membrane

integral to membrane

 
218194_at 0.475 8.905 2.594 2.015e-02 0.223 -3.360 REXO2 REX2, RNA exonuclease 2 homolog (S. cerevisiae) 11 113815317 NM_015523 11q23.1-q23.2 Hs.677190 Hs.7527 15

nucleic acid binding

intracellular

nucleus

mitochondrion

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

3'-5' exonuclease activity

nucleotide metabolic process

hydrolase activity

manganese ion binding

 
237111_at -0.320 3.863 -2.594 2.016e-02 0.223 -3.360 FLJ44450 hypothetical gene supported by AK126414 2   AW118588 2p21 Hs.631883      
222994_at 0.322 9.429 2.594 2.018e-02 0.223 -3.361 PRDX5 peroxiredoxin 5 11 63842144 AF197952 11q13 Hs.502823 37

cytoplasm

mitochondrion

peroxisome

inflammatory response

response to oxidative stress

oxidoreductase activity

cellular response to reactive oxygen species

caspase inhibitor activity

negative regulation of apoptosis

cytosolic part

cell redox homeostasis

peroxiredoxin activity

oxidation reduction

 
231706_s_at 0.255 3.931 2.593 2.019e-02 0.223 -3.361 EVX1 even-skipped homeobox 1 7 27248688 AI820879 7p15-p14 Hs.369879 5

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

embryonic development ending in birth or egg hatching

regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

 
226973_at 0.305 5.207 2.593 2.020e-02 0.223 -3.361 VSTM2L V-set and transmembrane domain containing 2 like 20 35964912 AA206763 20q11.23 Hs.517029 5    
226866_at -0.262 7.587 -2.593 2.021e-02 0.223 -3.362 ESCO1 establishment of cohesion 1 homolog 1 (S. cerevisiae) 18 -17363259 BF211488 18q11.2 Hs.464733 8

damaged DNA binding

DNA-directed DNA polymerase activity

nucleus

DNA repair

cell cycle

zinc ion binding

acyltransferase activity

transferase activity

metal ion binding

 
228141_at 0.413 4.206 2.593 2.021e-02 0.223 -3.362 GPX8 glutathione peroxidase 8 (putative) 5 54491740 AA173223 5q11.2 Hs.289044 4

glutathione peroxidase activity

response to oxidative stress

membrane

integral to membrane

oxidoreductase activity

oxidation reduction

 
243520_x_at 0.188 1.871 2.593 2.021e-02 0.223 -3.362 ADAM30 ADAM metallopeptidase domain 30 1 -120237678 AI214466 1p13-p11 Hs.283011 6

metalloendopeptidase activity

proteolysis

peptidase activity

zinc ion binding

membrane

integral to membrane

metal ion binding

 
236905_at -0.311 4.776 -2.593 2.022e-02 0.223 -3.363 LOC731139 hypothetical LOC731139 1   AI276857 1q42.13        
226111_s_at 0.212 5.160 2.592 2.024e-02 0.223 -3.363 ZNF385A zinc finger protein 385A 12 -53049186, -53049186 BF525395 12q13.13 Hs.505653 8

DNA binding

protein binding

intracellular

nucleus

nucleolus

cytoplasm

zinc ion binding

regulation of transcription

metal ion binding

 
204004_at 0.395 4.845 2.592 2.024e-02 0.223 -3.363 PAWR PRKC, apoptosis, WT1, regulator 12 -78509875 AI336206 12q21 Hs.643130 53

negative regulation of transcription from RNA polymerase II promoter

transcription corepressor activity

nucleus

cytoplasm

plasma membrane

negative regulation of cell proliferation

enzyme binding

negative regulation of B cell proliferation

interleukin-2 biosynthetic process

negative regulation of T cell proliferation

positive regulation of amyloid precursor protein biosynthetic process

positive regulation of apoptosis

regulation of transcription

negative regulation of T cell receptor signaling pathway

 
205577_at -0.517 12.649 -2.592 2.024e-02 0.223 -3.364 PYGM phosphorylase, glycogen, muscle 11 -64270436 NM_005609 11q12-q13.2 Hs.154084 49

nucleotide binding

response to hypoxia

protein binding

carbohydrate metabolic process

glycogen catabolic process

cellular calcium ion homeostasis

glycogen phosphorylase activity

sarcoplasmic reticulum

transferase activity, transferring glycosyl groups

pyridoxal phosphate binding

response to cAMP

Starch and sucrose metabolism

Insulin signaling pathway

208173_at -0.295 4.247 -2.592 2.025e-02 0.223 -3.364 IFNB1 interferon, beta 1, fibroblast 9 -21067103 NM_002176 9p21 Hs.93177 127

transcription corepressor activity

cytokine activity

interferon-alpha/beta receptor binding

extracellular region

extracellular space

induction of apoptosis

activation of caspase activity

activation of caspase activity

cell surface receptor linked signal transduction

negative regulation of cell proliferation

response to virus

natural killer cell activation

negative regulation of viral transcription

B cell proliferation

defense response to bacterium

positive regulation of innate immune response

regulation of MHC class I biosynthetic process

negative regulation of virion penetration into host cell

Cytokine-cytokine receptor interaction

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

227830_at 0.217 3.524 2.592 2.025e-02 0.223 -3.364 GABRB3 gamma-aminobutyric acid (GABA) A receptor, beta 3 15 -24339786, -24339786 AI478781 15q11.2-q12 Hs.302352 Hs.657298 64

GABA-A receptor activity

ion channel activity

extracellular ligand-gated ion channel activity

chloride channel activity

plasma membrane

integral to plasma membrane

ion transport

signal transduction

cell junction

neurotransmitter receptor activity

chloride ion binding

chloride channel complex

synapse

postsynaptic membrane

Neuroactive ligand-receptor interaction

206829_x_at 0.309 5.282 2.592 2.026e-02 0.223 -3.364 ZNF430 zinc finger protein 430 19 20995336 NM_025189 19p12 Hs.466289 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
211424_x_at -0.216 5.596 -2.592 2.026e-02 0.223 -3.365 METTL7A methyltransferase like 7A 12 49604800 AF113007 12q13.12 Hs.711113 Hs.716437 6

metabolic process

methyltransferase activity

transferase activity

 
205471_s_at 0.426 4.605 2.591 2.028e-02 0.223 -3.365 DACH1 dachshund homolog 1 (Drosophila) 13 -70910098 AW772082 13q22 Hs.129452 24

nucleotide binding

transcription factor activity

protein binding

nucleus

transcription factor complex

cytoplasm

multicellular organismal development

regulation of transcription

 
203090_at -0.198 6.966 -2.591 2.029e-02 0.223 -3.365 SDF2 stromal cell-derived factor 2 17 -23999733 NM_006923 17q11.2 Hs.514036 5

dolichyl-phosphate-mannose-protein mannosyltransferase activity

extracellular region

extracellular space

protein amino acid glycosylation

membrane

 
228054_at 0.220 5.354 2.591 2.029e-02 0.223 -3.365 TMEM44 transmembrane protein 44 3 -195789690 BF593660 3q29 Hs.478729 1

membrane

integral to membrane

 
210552_s_at 0.255 4.523 2.591 2.030e-02 0.223 -3.366 RALGPS1 Ral GEF with PH domain and SH3 binding motif 1 9 128716873 AF221098 9q33.3 Hs.648175 4

guanyl-nucleotide exchange factor activity

cellular_component

intracellular

cytoplasm

plasma membrane

small GTPase mediated signal transduction

 
229289_at 0.403 5.567 2.590 2.031e-02 0.223 -3.367 FAM71E1 family with sequence similarity 71, member E1 19 -55661856 AL517395 19q13.33 Hs.448941 1    
211994_at -0.312 9.340 -2.590 2.032e-02 0.223 -3.367 WNK1 WNK lysine deficient protein kinase 1 12 732485 AI742553 12p13.3 Hs.709894 51

nucleotide binding

molecular_function

protein serine/threonine kinase activity

protein kinase inhibitor activity

protein binding

ATP binding

cytoplasm

cytoplasm

protein amino acid phosphorylation

ion transport

protein kinase cascade

biological_process

transferase activity

regulation of cellular process

 
227702_at -0.579 5.832 -2.590 2.033e-02 0.223 -3.367 CYP4X1 cytochrome P450, family 4, subfamily X, polypeptide 1 1 47261826 AA557324 1p33 Hs.439760 7

monooxygenase activity

endoplasmic reticulum

microsome

electron carrier activity

membrane

heme binding

metal ion binding

oxidation reduction

aromatase activity

 
1554027_a_at -0.268 3.297 -2.590 2.034e-02 0.223 -3.368 SLC4A4 solute carrier family 4, sodium bicarbonate cotransporter, member 4 4 72271866, 72423633 BC030977 4q21 Hs.5462 45

transporter activity

inorganic anion exchanger activity

plasma membrane

integral to plasma membrane

sodium ion transport

anion transport

anion transmembrane transporter activity

sodium:bicarbonate symporter activity

symporter activity

sodium ion binding

 
214076_at 0.247 6.166 2.590 2.035e-02 0.223 -3.368 GFOD2 glucose-fructose oxidoreductase domain containing 2 16 -66272119, -66265937 AI697803 16q22.1 Hs.461030 Hs.656247 7

binding

extracellular region

proteinaceous extracellular matrix

electron carrier activity

oxidoreductase activity

extracellular matrix organization

oxidation reduction

 
203441_s_at 0.260 4.898 2.590 2.035e-02 0.223 -3.368 CDH2 cadherin 2, type 1, N-cadherin (neuronal) 18 -23784927 NM_001792 18q11.2 Hs.464829 Hs.606106 102

calcium ion binding

plasma membrane

adherens junction

cell adhesion

homophilic cell adhesion

heterophilic cell adhesion

synaptogenesis

integral to membrane

calcium-dependent cell-cell adhesion

cell migration

protein phosphatase binding

lamellipodium

RPTP-like protein binding

synapse

blood vessel morphogenesis

Cell adhesion molecules (CAMs)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

220173_at 0.331 4.762 2.590 2.035e-02 0.223 -3.368 C14orf45 chromosome 14 open reading frame 45 14 73555811 NM_025057 14q24.3 Hs.644621 5    
207331_at 0.301 3.041 2.589 2.036e-02 0.223 -3.369 CENPF centromere protein F, 350/400ka (mitosin) 1 212843154 NM_016343 1q32-q41 Hs.497741 33

G2 phase of mitotic cell cycle

chromatin

spindle pole

outer kinetochore of condensed chromosome

outer kinetochore of condensed chromosome

chromatin binding

nucleus

nuclear envelope

chromosome

cytoplasm

DNA replication

mitosis

mitotic cell cycle spindle assembly checkpoint

multicellular organismal development

muscle organ development

protein C-terminus binding

transcription factor binding

cell proliferation

regulation of G2/M transition of mitotic cell cycle

protein transport

protein transport

regulation of striated muscle tissue development

nuclear matrix

negative regulation of transcription

cell differentiation

midbody

response to drug

protein homodimerization activity

dynein binding

perinuclear region of cytoplasm

cell division

metaphase plate congression

kinetochore assembly

 
230106_at -0.193 4.322 -2.589 2.036e-02 0.223 -3.369 ZXDC ZXD family zinc finger C 3 -127652648, -127639133 BF447897 3q21.3 Hs.440049 Hs.711046 8

nucleic acid binding

transcription factor activity

intracellular

nucleus

zinc ion binding

transcription activator activity

LRR domain binding

identical protein binding

positive regulation of transcription

metal ion binding

C2H2 zinc finger domain binding

 
228647_at -0.397 6.202 -2.589 2.036e-02 0.223 -3.369 LOC100049716 hypothetical protein LOC100049716 12   AI675844 12p13.33 Hs.655804 1    
234714_x_at 0.193 5.472 2.589 2.038e-02 0.224 -3.370 ATP2B2 ATPase, Ca++ transporting, plasma membrane 2 3 -10340706 U15688 3p25.3 Hs.268942 30

nucleotide binding

magnesium ion binding

calcium-transporting ATPase activity

calcium ion binding

calmodulin binding

ATP binding

cytoplasm

plasma membrane

ATP biosynthetic process

cation transport

calcium ion transport

sensory perception of sound

metabolic process

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

neuron differentiation

Calcium signaling pathway

205711_x_at 0.353 11.710 2.589 2.039e-02 0.224 -3.370 ATP5C1 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 10 7870098 NM_005174 10p15.1 Hs.271135 18

mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)

mitochondrion

mitochondrion

mitochondrial matrix

ion transport

ATP synthesis coupled proton transport

proton transport

membrane

ATPase activity

ATPase activity

hydrogen ion transporting ATP synthase activity, rotational mechanism

proton-transporting ATPase activity, rotational mechanism

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

1553743_at -0.495 6.666 -2.588 2.040e-02 0.224 -3.371 FAM119A family with sequence similarity 119, member A 2 -208182083, -208182083 NM_145280 2q33.3 Hs.664764 2

membrane

integral to membrane

 
1570447_at -0.203 4.417 -2.588 2.040e-02 0.224 -3.371 FLJ44054 hypothetical protein LOC643365 13 -113487457 BC034570 13q34 Hs.680435 1    
214180_at 0.267 5.544 2.588 2.041e-02 0.224 -3.371 MAN1C1 mannosidase, alpha, class 1C, member 1 1 25816545 AW340588 1p35 Hs.197043 26

mannosyl-oligosaccharide 1,2-alpha-mannosidase activity

calcium ion binding

Golgi apparatus

protein amino acid N-linked glycosylation

metabolic process

membrane

integral to membrane

hydrolase activity, acting on glycosyl bonds

integral to Golgi membrane

N-Glycan biosynthesis

Metabolic pathways

201424_s_at -0.269 9.520 -2.588 2.042e-02 0.224 -3.371 CUL4A cullin 4A 13 112911086, 112911931 NM_003589 13q34 Hs.339735 48

G1/S transition of mitotic cell cycle

protein binding

DNA repair

ubiquitin-dependent protein catabolic process

response to DNA damage stimulus

cell cycle arrest

negative regulation of cell proliferation

induction of apoptosis by intracellular signals

cullin-RING ubiquitin ligase complex

ubiquitin protein ligase binding

Nucleotide excision repair

Ubiquitin mediated proteolysis

213287_s_at -0.371 8.508 -2.588 2.043e-02 0.224 -3.372 KRT10 keratin 10 17 -36227895 X14487 17q21 Hs.99936 49

protein binding

intermediate filament

epidermis development

structural constituent of epidermis

 
207092_at 0.490 4.178 2.587 2.044e-02 0.224 -3.372 LEP leptin 7 127668566 NM_000230 7q31.3 Hs.194236 628

response to dietary excess

hormone activity

protein binding

extracellular region

extracellular space

glucose metabolic process

regulation of gluconeogenesis

energy reserve metabolic process

lipid metabolic process

signal transduction

growth factor activity

cholesterol metabolic process

bile acid metabolic process

adult feeding behavior

regulation of metabolic process

central nervous system neuron development

regulation of intestinal cholesterol absorption

negative regulation of appetite

response to insulin stimulus

hormone metabolic process

eating behavior

positive regulation of myeloid cell differentiation

regulation of insulin secretion

regulation of steroid biosynthetic process

Cytokine-cytokine receptor interaction

Neuroactive ligand-receptor interaction

Jak-STAT signaling pathway

Adipocytokine signaling pathway

1552770_s_at 0.244 4.807 2.587 2.045e-02 0.224 -3.373 ZNF563 zinc finger protein 563 19 -12289305 NM_145276 19p13.2 Hs.663510 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
231678_s_at 0.225 2.289 2.587 2.046e-02 0.224 -3.373 ADH4 alcohol dehydrogenase 4 (class II), pi polypeptide 4 -100263855 AV651117 4q21-q24 4q22 Hs.1219 30

NADPH:quinone reductase activity

alcohol dehydrogenase activity, zinc-dependent

aldehyde reductase activity

retinol dehydrogenase activity

binding

all-trans retinal binding

cellular_component

cytoplasm

ethanol oxidation

cellular aldehyde metabolic process

zinc ion binding

oxidoreductase activity

benzaldehyde dehydrogenase activity

retinol binding

quinone cofactor metabolic process

retinol metabolic process

alcohol catabolic process

metal ion binding

NAD or NADH binding

oxidation reduction

Glycolysis / Gluconeogenesis

Fatty acid metabolism

Tyrosine metabolism

1- and 2-Methylnaphthalene degradation

3-Chloroacrylic acid degradation

Retinol metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

Metabolic pathways

238706_at -0.378 4.146 -2.586 2.048e-02 0.224 -3.374 PAPD4 PAP associated domain containing 4 5 78943998 BG168850 5q14.1 Hs.418198 5

nucleotide binding

polynucleotide adenylyltransferase activity

ATP binding

nucleus

cytoplasm

mRNA processing

transferase activity

nuclear RNA-directed RNA polymerase complex

RNA polyadenylation

 
209685_s_at 0.367 4.286 2.586 2.048e-02 0.224 -3.374 PRKCB protein kinase C, beta 16 23754800 M13975 16p11.2 Hs.460355 235

nucleotide binding

protein kinase C activity

calcium channel regulator activity

calcium ion binding

protein binding

ATP binding

nucleus

cytoplasm

cytosol

plasma membrane

plasma membrane

protein amino acid phosphorylation

calcium ion transport

cellular calcium ion homeostasis

intracellular signaling cascade

zinc ion binding

transferase activity

diacylglycerol binding

lipoprotein transport

MAPK signaling pathway

ErbB signaling pathway

Calcium signaling pathway

Chemokine signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Wnt signaling pathway

VEGF signaling pathway

Focal adhesion

Tight junction

Gap junction

Natural killer cell mediated cytotoxicity

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Long-term potentiation

Long-term depression

GnRH signaling pathway

Melanogenesis

Vibrio cholerae infection

Pathways in cancer

Glioma

Non-small cell lung cancer

203547_at 0.246 6.362 2.586 2.048e-02 0.224 -3.374 CD4 CD4 molecule 12 6768911 U47924 12pter-p12 Hs.631659 992

conjugation with cellular fusion

cytokine production

glycoprotein binding

transmembrane receptor activity

extracellular matrix structural constituent

early endosome

endoplasmic reticulum lumen

endoplasmic reticulum membrane

endoplasmic reticulum membrane

plasma membrane

plasma membrane

protein amino acid N-linked glycosylation

immune response

cell adhesion

transmembrane receptor protein tyrosine kinase signaling pathway

zinc ion binding

external side of plasma membrane

coreceptor activity

integral to membrane

initiation of viral infection

protein kinase binding

T cell receptor complex

MHC class II protein binding

protein homodimerization activity

interspecies interaction between organisms

T cell selection

positive regulation of interleukin-2 biosynthetic process

membrane raft

positive regulation of protein kinase activity

positive regulation of peptidyl-tyrosine phosphorylation

positive regulation of calcium-mediated signaling

positive regulation of T cell activation

response to protein stimulus

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Hematopoietic cell lineage

T cell receptor signaling pathway

Primary immunodeficiency

204347_at 0.323 5.202 2.586 2.050e-02 0.224 -3.375 AK3L1 adenylate kinase 3-like 1 1 65385819, 65386100, 65386473 AI653169 1p31.3 Hs.10862 Hs.592601 10

nucleotide binding

adenylate kinase activity

ATP binding

GTP binding

mitochondrion

mitochondrial matrix

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

transferase activity

Purine metabolism

Metabolic pathways

210774_s_at -0.305 10.935 -2.586 2.051e-02 0.224 -3.375 NCOA4 nuclear receptor coactivator 4 10 51235113, 51242369, 51246290 AL162047 10q11.2 Hs.643658 Hs.709644 43

transcription coactivator activity

protein binding

nucleus

male gonad development

androgen receptor signaling pathway

regulation of transcription

positive regulation of transcription, DNA-dependent

androgen receptor binding

Pathways in cancer

Thyroid cancer

206993_at 0.583 7.515 2.586 2.051e-02 0.224 -3.375 ATP5S ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s (factor B) 14 49848796, 49848796 NM_015684 14q21.3 Hs.438489 12

mitochondrion

mitochondrial inner membrane

ATP biosynthetic process

ion transport

hydrogen ion transmembrane transporter activity

proton transport

membrane

proton-transporting ATP synthase complex, coupling factor F(o)

 
201966_at 0.258 11.400 2.585 2.053e-02 0.224 -3.376 NDUFS2 NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase) 1 159435728 NM_004550 1q23 Hs.173611 19

NADH dehydrogenase activity

iron ion binding

protein binding

mitochondrion

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial respiratory chain complex I

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

transport

response to oxidative stress

NADH dehydrogenase (ubiquinone) activity

electron carrier activity

membrane

electron transport chain

metal ion binding

quinone binding

NAD or NADH binding

4 iron, 4 sulfur cluster binding

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

212226_s_at 0.309 8.307 2.585 2.054e-02 0.224 -3.377 PPAP2B phosphatidic acid phosphatase type 2B 1 -56733020 AA628586 1pter-p22.1 Hs.405156 Hs.715848 16

blood vessel development

gastrulation with mouth forming second

phosphoprotein phosphatase activity

Golgi apparatus

cytosol

plasma membrane

lipid metabolic process

phospholipid metabolic process

phosphatidate phosphatase activity

phosphatidate phosphatase activity

germ cell migration

integral to membrane

hydrolase activity

regulation of Wnt receptor signaling pathway

lipid phosphatase activity

Glycerolipid metabolism

Glycerophospholipid metabolism

Ether lipid metabolism

Sphingolipid metabolism

Metabolic pathways

Fc gamma R-mediated phagocytosis

205950_s_at 0.336 6.433 2.585 2.054e-02 0.224 -3.377 CA1 carbonic anhydrase I 8 -86427709, -86427709 NM_001738 8q13-q22.1 Hs.23118 30

carbonate dehydratase activity

cytoplasm

one-carbon metabolic process

zinc ion binding

lyase activity

metal ion binding

Nitrogen metabolism

205027_s_at -0.300 3.152 -2.585 2.055e-02 0.224 -3.377 MAP3K8 mitogen-activated protein kinase kinase kinase 8 10 30762871 NM_005204 10p11.23 Hs.432453 46

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

protein binding

ATP binding

cytoplasm

cytosol

protein amino acid phosphorylation

cell cycle

signal transduction

transferase activity

MAPK signaling pathway

Toll-like receptor signaling pathway

T cell receptor signaling pathway

233298_at 0.229 3.210 2.585 2.055e-02 0.224 -3.377 C13orf38 chromosome 13 open reading frame 38 13 -35703215, -35699181 AL139377 13q13.3 Hs.124519 Hs.656745 3    
232011_s_at 0.323 6.301 2.584 2.056e-02 0.224 -3.378 MAP1LC3A microtubule-associated protein 1 light chain 3 alpha 20 32598352, 32610179 AL118520 20cen-q13 Hs.632273 29

autophagic vacuole formation

protein binding

cytoplasm

autophagic vacuole

cytosol

microtubule

autophagy

phosphatidylethanolamine binding

modification-dependent protein catabolic process

organelle membrane

cytoplasmic vesicle

 
212234_at -0.385 6.339 -2.583 2.060e-02 0.225 -3.379 ASXL1 additional sex combs like 1 (Drosophila) 20 30409813 AL034550 20q11.1 Hs.374043 13

protein binding

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
229577_at 0.251 5.122 2.583 2.061e-02 0.225 -3.380 AGPAT6 1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta) 8 41554863 AI742085 8p11.21 Hs.355753 7

glandular epithelial cell maturation

1-acylglycerol-3-phosphate O-acyltransferase activity

glycerol-3-phosphate O-acyltransferase activity

membrane fraction

endoplasmic reticulum

endoplasmic reticulum

acyl-CoA metabolic process

phosphatidylcholine biosynthetic process

lactation

metabolic process

acyltransferase activity

phospholipid biosynthetic process

membrane

integral to membrane

transferase activity

triglyceride biosynthetic process

triglyceride biosynthetic process

regulation of multicellular organism growth

diacylglycerol metabolic process

Glycerolipid metabolism

Glycerophospholipid metabolism

Ether lipid metabolism

Metabolic pathways

225198_at -0.392 8.089 -2.583 2.063e-02 0.225 -3.381 VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 18 9903954 AL571942 18p11.22 Hs.699980 18

signal transducer activity

structural molecule activity

protein binding

membrane fraction

endoplasmic reticulum

microtubule

plasma membrane

tight junction

membrane fusion

integral to membrane

vesicle

positive regulation of I-kappaB kinase/NF-kappaB cascade

protein heterodimerization activity

perinuclear region of cytoplasm

Tight junction

224318_s_at -0.392 8.751 -2.583 2.063e-02 0.225 -3.381 KIAA1310 KIAA1310 2 -96622633 AF311326 2p12-p11.2 Hs.516341 10    
225474_at 0.518 5.455 2.583 2.063e-02 0.225 -3.381 MAGI1 membrane associated guanylate kinase, WW and PDZ domain containing 1 3 -65319983, -65314945 AI141556 3p14.1 Hs.651939 24

nucleotide binding

ATP binding

plasma membrane

cell-cell junction

tight junction

protein complex assembly

cell adhesion

cell surface receptor linked signal transduction

protein C-terminus binding

Tight junction

1554126_at -0.356 8.070 -2.582 2.066e-02 0.225 -3.382 MSRB3 methionine sulfoxide reductase B3 12 63958754 BC040053 12q14.3 Hs.339024 6

mitochondrion

endoplasmic reticulum

peptide-methionine-(S)-S-oxide reductase activity

zinc ion binding

oxidoreductase activity

metal ion binding

oxidation reduction

 
213021_at -0.379 6.571 -2.582 2.067e-02 0.225 -3.382 GOSR1 golgi SNAP receptor complex member 1 17 25828551 AI741876 17q11 Hs.462680 18

Golgi membrane

SNAP receptor activity

Golgi apparatus

intracellular protein transport

ER to Golgi vesicle-mediated transport

intra-Golgi vesicle-mediated transport

membrane

integral to membrane

vesicle-mediated transport

SNARE complex

retrograde transport, endosome to Golgi

SNARE interactions in vesicular transport

201556_s_at -0.281 5.130 -2.581 2.070e-02 0.226 -3.384 VAMP2 vesicle-associated membrane protein 2 (synaptobrevin 2) 17 -8003189 BC002737 17p13.1 Hs.25348 66

protein binding

integral to plasma membrane

membrane

vesicle-mediated transport

synaptosome

cell junction

cytoplasmic vesicle

synapse

SNARE interactions in vesicular transport

224983_at -0.257 9.933 -2.581 2.071e-02 0.226 -3.384 SCARB2 scavenger receptor class B, member 2 4 -77298917 BF339821 4q21.1 Hs.349656 Hs.714206 24

receptor activity

protein binding

membrane fraction

lysosome

integral to plasma membrane

cell adhesion

membrane

Lysosome

231929_at -0.595 5.666 -2.580 2.073e-02 0.226 -3.385 IKZF2 IKAROS family zinc finger 2 (Helios) 2 -213572655, -213572655 AI458439 2q34 Hs.604950 15

molecular_function

DNA binding

intracellular

nucleus

biological_process

zinc ion binding

regulation of transcription

metal ion binding

 
201409_s_at -0.399 9.131 -2.580 2.074e-02 0.226 -3.385 PPP1CB protein phosphatase 1, catalytic subunit, beta isoform 2 28828117, 28828129 NM_002709 2p23 Hs.591571 Hs.702907 42

protein serine/threonine phosphatase activity

iron ion binding

protein binding

cytoplasm

carbohydrate metabolic process

glycogen metabolic process

protein amino acid dephosphorylation

cell cycle

hydrolase activity

manganese ion binding

metal ion binding

cell division

MLL5-L complex

Vascular smooth muscle contraction

Focal adhesion

Long-term potentiation

Regulation of actin cytoskeleton

Insulin signaling pathway

205976_at -0.322 3.645 -2.580 2.074e-02 0.226 -3.386 FASTKD2 FAST kinase domains 2 2 207338356 NM_014929 2q33.3 Hs.5930 8

protein kinase activity

ATP binding

apoptosis

 
236285_at 0.699 4.473 2.580 2.076e-02 0.226 -3.386 KLHDC7B kelch domain containing 7B 22 49333327 AI631846 22q13.33 Hs.137007 3    
213715_s_at 0.312 6.080 2.579 2.077e-02 0.226 -3.387 KANK3 KN motif and ankyrin repeat domains 3 19 -8293467 AF070591 19p13.2 Hs.322473 6    
239824_s_at 0.424 4.861 2.579 2.077e-02 0.226 -3.387 TMEM107 transmembrane protein 107 17 -8017020 BF971873 17p13.1 Hs.513933 4

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
215016_x_at -0.219 10.701 -2.579 2.077e-02 0.226 -3.387 DST dystonin 6 -56587338, -56576527, -56430743, -56430743, -56430743, -56430743, -56430743 BC004912 6p12.1 Hs.631992 Hs.669931 48

actin binding

integrin binding

calcium ion binding

protein binding

protein binding

basement membrane

cytoplasm

cytoplasm

cytoskeleton

cell cycle arrest

cell adhesion

integrin-mediated signaling pathway

protein C-terminus binding

cytoplasmic membrane-bounded vesicle

actin cytoskeleton organization

hemidesmosome

intermediate filament cytoskeleton organization

intermediate filament cytoskeleton organization

intermediate filament cytoskeleton organization

actin filament binding

 
231959_at -0.326 5.897 -2.579 2.079e-02 0.226 -3.387 LIN52 lin-52 homolog (C. elegans) 14 73621408 AK023979 14q24.3 Hs.612866 6    
230591_at 0.432 6.152 2.579 2.079e-02 0.226 -3.388 LOC729887 hypothetical protein LOC729887 16   AI792242 16q23.3 Hs.568369 1    
221935_s_at -0.472 5.848 -2.579 2.080e-02 0.226 -3.388 C3orf64 chromosome 3 open reading frame 64 3 -69107057 AK023140 3p14.1 Hs.518059 2

extracellular region

endoplasmic reticulum

transferase activity, transferring glycosyl groups

 
227557_at 0.278 4.267 2.578 2.081e-02 0.226 -3.388 SCARF2 scavenger receptor class F, member 2 22 -19108874 AI127800 22q11.21 Hs.474251 4

receptor activity

scavenger receptor activity

protein binding

cell adhesion

heterophilic cell adhesion

membrane

integral to membrane

 
208642_s_at -0.299 8.198 -2.578 2.082e-02 0.226 -3.389 XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 2 216682264 AA205834 2q35 Hs.388739 148

nucleotide binding

telomere maintenance

nuclear telomere cap complex

DNA binding

double-stranded telomeric DNA binding

ATP-dependent DNA helicase activity

helicase activity

ATP binding

nucleus

nucleoplasm

chromosome

double-strand break repair via nonhomologous end joining

response to DNA damage stimulus

protein C-terminus binding

promoter binding

hydrolase activity

provirus integration

initiation of viral infection

Non-homologous end-joining

222986_s_at 0.254 6.243 2.578 2.083e-02 0.226 -3.389 SHISA5 shisa homolog 5 (Xenopus laevis) 3 -48484200 BC001463 3p21.31 Hs.414579 7

signal transducer activity

nucleus

endoplasmic reticulum

apoptosis

membrane

integral to membrane

nuclear membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

p53 signaling pathway

210736_x_at -0.378 6.136 -2.578 2.084e-02 0.226 -3.390 DTNA dystrobrevin, alpha 18 30327251, 30327251, 30327251, 30427279, 30544193, 30589937, 30589937, 30652299, 30652299 U46746 18q12 Hs.643454 38

calcium ion binding

protein binding

cytoplasm

striated muscle contraction

signal transduction

neuromuscular synaptic transmission

zinc ion binding

cell junction

synapse

 
224321_at -0.987 5.079 -2.578 2.084e-02 0.226 -3.390 TMEFF2 transmembrane protein with EGF-like and two follistatin-like domains 2 2 -192522991 AB004064 2q32.3 Hs.144513 31

molecular_function

extracellular region

membrane

integral to membrane

 
228489_at 0.502 5.183 2.578 2.084e-02 0.226 -3.390 TM4SF18 transmembrane 4 L six family member 18 3 -150521544 AI721164 3q25.1 Hs.22026 3

membrane

integral to membrane

 
207622_s_at -0.342 6.421 -2.577 2.085e-02 0.226 -3.390 ABCF2 ATP-binding cassette, sub-family F (GCN20), member 2 7 -150540508, -150535855 NM_005692 7q36 Hs.654958 15

nucleotide binding

transporter activity

ATP binding

mitochondrial envelope

transport

ATPase activity

ATP-binding cassette (ABC) transporter complex

 
223249_at -0.352 7.598 -2.577 2.085e-02 0.226 -3.390 CLDN12 claudin 12 7 89870731 AL136770 7q21 Hs.258576 21

structural molecule activity

plasma membrane

tight junction

integral to membrane

calcium-independent cell-cell adhesion

cell junction

identical protein binding

 
210104_at -0.286 6.849 -2.577 2.086e-02 0.226 -3.391 MED6 mediator complex subunit 6 14 -70120709 AF074723 14q24.2 Hs.497353 22

RNA polymerase II transcription factor activity

transcription coactivator activity

nucleus

RNA polymerase II transcription mediator activity

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

 
219409_at -0.304 4.446 -2.577 2.087e-02 0.226 -3.391 SNIP1 Smad nuclear interacting protein 1 1 -37774728 NM_024700 1p34.3 Hs.471951 14

protein binding

nucleus

regulation of transcription, DNA-dependent

I-kappaB kinase/NF-kappaB cascade

 
202709_at 0.390 6.329 2.577 2.087e-02 0.226 -3.391 FMOD fibromodulin 1 -201576374 NM_002023 1q32 Hs.519168 22

protein binding

extracellular region

proteinaceous extracellular matrix

transforming growth factor beta receptor complex assembly

 
200004_at -0.326 11.047 -2.577 2.087e-02 0.226 -3.391 EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 11 -10775168 NM_001418 11p15 Hs.183684 39

translation initiation factor activity

protein binding

regulation of translational initiation

cell cycle arrest

cell death

RNA metabolic process

eukaryotic translation initiation factor 4F complex

 
229113_s_at 0.351 5.894 2.577 2.087e-02 0.226 -3.391 C1orf86 chromosome 1 open reading frame 86 1 -2110847 W16779 1p36.33 Hs.107101 Hs.719244 5    
224892_at -0.408 8.185 -2.577 2.087e-02 0.226 -3.391 PLDN pallidin homolog (mouse) 15 43666708 BF680495 15q21.1 Hs.719102 17

cellular_component

cytoplasm

endosome

membrane fusion

blood coagulation

membrane

synaptic vesicle docking during exocytosis

melanocyte differentiation

syntaxin-13 binding

positive regulation of natural killer cell activation

secretion of lysosomal enzymes

identical protein binding

pigmentation

 
225868_at 0.243 6.118 2.577 2.087e-02 0.226 -3.391 TRIM47 tripartite motif-containing 47 17 -71381839 AW249467 17q24-q25 Hs.293660 5

protein binding

intracellular

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
226484_at -0.293 8.379 -2.577 2.088e-02 0.226 -3.391 ZBTB47 zinc finger and BTB domain containing 47 3 42675877 AA532640 3p22.1 Hs.409561 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
203187_at 0.278 5.490 2.576 2.089e-02 0.226 -3.392 DOCK1 dedicator of cytokinesis 1 10 128584012 NM_001380 10q26.13-q26.3 Hs.159195 Hs.645702 39

guanyl-nucleotide exchange factor activity

GTPase activator activity

protein binding

cytoplasm

phagocytosis, engulfment

apoptosis

signal transduction

integrin-mediated signaling pathway

small GTPase mediated signal transduction

membrane

SH3 domain binding

Focal adhesion

Regulation of actin cytoskeleton

213617_s_at 0.302 5.454 2.576 2.090e-02 0.226 -3.392 C18orf10 chromosome 18 open reading frame 10 18 -32630031 BF063896 18q12.2 Hs.695999 5

cytoplasm

cytoskeleton

microtubule

 
214429_at -0.317 7.651 -2.576 2.091e-02 0.226 -3.393 MTMR6 myotubularin related protein 6 13 -24718340 U47635 13q12 Hs.643702 17

protein serine/threonine phosphatase activity

protein tyrosine phosphatase activity

cellular_component

nucleus

nuclear envelope

cytoplasm

protein amino acid dephosphorylation

calcium-activated potassium channel activity

hydrolase activity

phosphatase activity

Fructose and mannose metabolism

Thiamine metabolism

Riboflavin metabolism

Metabolic pathways

203542_s_at -0.623 7.944 -2.576 2.092e-02 0.226 -3.393 KLF9 Kruppel-like factor 9 9 -72189332 AI690205 9q13 Hs.150557 Hs.602267 19

transcription factor activity

intracellular

nucleus

regulation of transcription from RNA polymerase II promoter

embryo implantation

zinc ion binding

regulation of transcription

metal ion binding

progesterone receptor signaling pathway

 
201127_s_at 0.230 5.530 2.576 2.092e-02 0.226 -3.393 ACLY ATP citrate lyase 17 -37276704 AI971281 17q12-q21 Hs.387567 22

nucleotide binding

magnesium ion binding

ATP citrate synthase activity

succinate-CoA ligase (ADP-forming) activity

protein binding

ATP binding

cytoplasm

cytosol

citrate metabolic process

ATP catabolic process

metabolic process

lipid biosynthetic process

citrate (pro-3S)-lyase activity

citrate lyase complex

coenzyme A metabolic process

transferase activity

cellular carbohydrate metabolic process

Citrate cycle (TCA cycle)

Reductive carboxylate cycle (CO2 fixation)

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

236831_at -0.379 4.498 -2.576 2.092e-02 0.226 -3.393 CCDC50 coiled-coil domain containing 50 3 192529567 AV683852 3q28 Hs.478682 12

protein binding

cytoplasm

 
220148_at -0.849 3.329 -2.575 2.094e-02 0.226 -3.394 ALDH8A1 aldehyde dehydrogenase 8 family, member A1 6 -135280220 NM_022568 6q23.2 Hs.486520 5

retinal dehydrogenase activity

intracellular

cytoplasm

oxidoreductase activity

retinoic acid metabolic process

retinal metabolic process

oxidation reduction

 
212493_s_at -0.308 7.673 -2.575 2.095e-02 0.226 -3.394 SETD2 SET domain containing 2 3 -47032903 AI761110 3p21.31 Hs.517941 18

DNA binding

protein binding

nucleus

methyltransferase activity

oxidoreductase activity

chromatin modification

transferase activity

histone-lysine N-methyltransferase activity

regulation of transcription

transition metal ion binding

Lysine degradation

222683_at -0.367 7.976 -2.575 2.095e-02 0.226 -3.395 RNF20 ring finger protein 20 9 103335953 AK022532 9q22 Hs.656088 19

ubiquitin ligase complex

protein polyubiquitination

p53 binding

transcription coactivator activity

ubiquitin-protein ligase activity

nucleus

chromosome

nucleolus

ubiquitin-dependent protein catabolic process

zinc ion binding

histone monoubiquitination

chromatin modification

ligase activity

negative regulation of cell migration

ubiquitin protein ligase binding

regulation of gene-specific transcription

histone H2B ubiquitination

histone H3-K79 methylation

histone binding

positive regulation of transcription

metal ion binding

histone H3-K4 methylation

 
210119_at 0.358 3.506 2.574 2.097e-02 0.226 -3.395 KCNJ15 potassium inwardly-rectifying channel, subfamily J, member 15 21 38550533, 38550739, 38566298 U73191 21q22.2 Hs.411299 18

inward rectifier potassium channel activity

voltage-gated ion channel activity

potassium channel activity

protein binding

cytoplasm

plasma membrane

integral to plasma membrane

focal adhesion

ion transport

potassium ion transport

potassium ion binding

 
1562743_at 0.285 4.691 2.574 2.098e-02 0.226 -3.396 ZNF33B zinc finger protein 33B 10 -42404560 BC042873 10q11.2 Hs.499453 9

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1557544_at -0.580 3.819 -2.574 2.099e-02 0.226 -3.396 CCDC147 coiled-coil domain containing 147 10 106103511 BC036225 10q25.1 Hs.253576 4    
211056_s_at 0.243 4.562 2.574 2.100e-02 0.226 -3.396 SRD5A1 steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1) 5 6686499 BC006373 5p15 Hs.552 50

3-oxo-5-alpha-steroid 4-dehydrogenase activity

cytoplasm

endoplasmic reticulum

microsome

lipid metabolic process

androgen biosynthetic process

sex determination

steroid metabolic process

electron carrier activity

membrane

integral to membrane

oxidoreductase activity, acting on the CH-CH group of donors

cell differentiation

oxidation reduction

Androgen and estrogen metabolism

212851_at -0.350 6.005 -2.574 2.100e-02 0.226 -3.397 DCUN1D4 DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae) 4 52404032 AA194584 4q12 Hs.605388 10

nucleus

 
235714_at -0.310 4.247 -2.574 2.101e-02 0.226 -3.397 GANC glucosidase, alpha; neutral C 15 40353657 AA203132 15q15.2 Hs.143261 44

hydrolase activity, hydrolyzing O-glycosyl compounds

alpha-glucosidase activity

carbohydrate metabolic process

metabolic process

Galactose metabolism

Starch and sucrose metabolism

Metabolic pathways

223515_s_at 0.344 8.955 2.573 2.101e-02 0.226 -3.397 COQ3 coenzyme Q3 homolog, methyltransferase (S. cerevisiae) 6 -99924068 AL136726 6q16.2 Hs.713623 6

hexaprenyldihydroxybenzoate methyltransferase activity

mitochondrion

mitochondrial matrix

glycerol metabolic process

ubiquinone biosynthetic process

metabolic process

O-methyltransferase activity

2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity

transferase activity

Ubiquinone and other terpenoid-quinone biosynthesis

Metabolic pathways

212331_at -0.383 7.883 -2.573 2.103e-02 0.226 -3.398 RBL2 retinoblastoma-like 2 (p130) 16 52025851 X76061 16q12.2 Hs.513609 93

DNA binding

protein binding

nucleus

cell cycle

chromatin modification

regulation of lipid kinase activity

regulation of transcription

Cell cycle

TGF-beta signaling pathway

241347_at 0.245 5.510 2.573 2.103e-02 0.226 -3.398 KIAA1618 KIAA1618 17 75849261 AA936632 17q25.3 Hs.514554 5    
215049_x_at 0.508 5.359 2.573 2.104e-02 0.226 -3.398 CD163 CD163 molecule 12 -7514676 Z22969 12p13.3 Hs.504641 51

scavenger receptor activity

protein binding

extracellular region

plasma membrane

integral to plasma membrane

acute-phase response

inflammatory response

 
243256_at 0.233 5.437 2.573 2.104e-02 0.226 -3.398 MKNK1 MAP kinase interacting serine/threonine kinase 1 1 -46795677 AW796364 1p33 Hs.371594 28

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

cytoplasm

regulation of translation

protein amino acid phosphorylation

response to stress

protein kinase cascade

transferase activity

MAPK signaling pathway

Insulin signaling pathway

228816_at 0.400 6.325 2.573 2.104e-02 0.226 -3.399 ATP6AP1L ATPase, H+ transporting, lysosomal accessory protein 1-like 5 81636921 AK022625 5q14.2 Hs.364045 2

ATP synthesis coupled proton transport

membrane

integral to membrane

proton-transporting V-type ATPase, V1 domain

hydrogen ion transporting ATP synthase activity, rotational mechanism

proton-transporting ATPase activity, rotational mechanism

 
206066_s_at 0.374 6.410 2.573 2.105e-02 0.226 -3.399 RAD51C RAD51 homolog C (S. cerevisiae) 17 54124961, 54124961 NM_002876 17q22-q23 Hs.412587 33

nucleotide binding

DNA binding

ATP binding

nucleus

DNA repair

response to DNA damage stimulus

female meiosis sister chromatid cohesion

reciprocal meiotic recombination

male meiosis I

spermatogenesis

DNA-dependent ATPase activity

crossover junction endodeoxyribonuclease activity

nucleoside-triphosphatase activity

Homologous recombination

226342_at -0.423 6.899 -2.572 2.108e-02 0.227 -3.400 SPTBN1 spectrin, beta, non-erythrocytic 1 2 54536957, 54639034 AW593244 2p21 Hs.503178 Hs.705692 46

actin binding

structural constituent of cytoskeleton

calmodulin binding

nucleus

nucleolus

cytoplasm

plasma membrane

common-partner SMAD protein phosphorylation

SMAD protein nuclear translocation

spectrin

cortical cytoskeleton

M band

actin filament capping

 
203861_s_at -0.420 12.563 -2.572 2.108e-02 0.227 -3.400 ACTN2 actinin, alpha 2 1 234916392 AU146889 1q42-q43 Hs.498178 57

actin binding

integrin binding

calcium ion binding

nucleolus

cytoplasm

cytoskeleton

actin filament

focal adhesion

muscle contraction

cell adhesion

structural constituent of muscle

Z disc

microspike assembly

filopodium

thyroid hormone receptor coactivator activity

pseudopodium

titin binding

identical protein binding

regulation of apoptosis

dendritic spine

protein dimerization activity

focal adhesion formation

protein homotetramerization

ZASP binding

FATZ 1 binding

titin Z domain binding

Focal adhesion

Adherens junction

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Systemic lupus erythematosus

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

213227_at -0.332 7.810 -2.572 2.109e-02 0.227 -3.400 PGRMC2 progesterone receptor membrane component 2 4 -129410746 BE879873 4q26 Hs.507910 9

steroid hormone receptor activity

receptor activity

steroid binding

protein binding

membrane

integral to membrane

heme binding

 
243354_at 0.296 2.574 2.571 2.110e-02 0.227 -3.401 HYDIN hydrocephalus inducing homolog (mouse) 16 -69618511, -69398789 AI027184 16q22.2 Hs.461229 Hs.669795 5    
227711_at 0.999 3.836 2.571 2.112e-02 0.227 -3.402 GTSF1 gametocyte specific factor 1 12 -53136002 BG150433 12q13.13 Hs.524476 3

cytoplasm

zinc ion binding

metal ion binding

 
236535_at -0.325 5.036 -2.571 2.112e-02 0.227 -3.402 SMC6 structural maintenance of chromosomes 6 2 -17708559 AW069285 2p24.2 Hs.526728 15

nucleotide binding

ATP binding

intracellular

nucleus

chromosome

DNA repair

DNA recombination

response to DNA damage stimulus

 
221660_at 0.334 7.042 2.571 2.112e-02 0.227 -3.402 MYL10 myosin, light chain 10, regulatory 7 -101043325 BC002778 7q22.1 Hs.247831 6

calcium ion binding

mitochondrion

Focal adhesion

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

223288_at -0.733 8.835 -2.571 2.112e-02 0.227 -3.402 USP38 ubiquitin specific peptidase 38 4 144325519 AW977401   Hs.480848 7

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
200840_at -0.436 11.286 -2.571 2.113e-02 0.227 -3.402 KARS lysyl-tRNA synthetase 16 -74219122 NM_005548 16q23-q24 Hs.3100 30

nucleotide binding

nucleic acid binding

lysine-tRNA ligase activity

ATP binding

soluble fraction

cytoplasm

lysyl-tRNA aminoacylation

ligase activity

Aminoacyl-tRNA biosynthesis

90610_at -0.262 7.515 -2.569 2.118e-02 0.227 -3.404 LRCH4 leucine-rich repeats and calponin homology (CH) domain containing 4 7 -100009569 AI654857 7q22 Hs.125742 11

protein binding

cytoplasm

nervous system development

negative regulation of transcription

transcription repressor activity

PML body

 
225509_at -0.372 7.304 -2.569 2.119e-02 0.227 -3.405 SAP30L SAP30-like 5 153805709 AI862477 5q33.2 Hs.592566 8

nucleus

nucleolus

regulation of transcription

 
237052_x_at -0.303 6.615 -2.569 2.120e-02 0.227 -3.405 GIGYF2 GRB10 interacting GYF protein 2 2 233270258 BE220828 2q37.1 Hs.565319 23

protein binding

 
224719_s_at 0.345 9.100 2.568 2.123e-02 0.228 -3.406 C12orf57 chromosome 12 open reading frame 57 12 6923463 BG339653 12p13.31 Hs.405913 Hs.591045 5    
217989_at 0.499 5.534 2.568 2.123e-02 0.228 -3.407 HSD17B11 hydroxysteroid (17-beta) dehydrogenase 11 4 -88476714 NM_016245 4q22.1 Hs.594923 14

estradiol 17-beta-dehydrogenase activity

binding

extracellular region

nucleus

cytoplasm

steroid biosynthetic process

androgen catabolic process

steroid dehydrogenase activity

oxidation reduction

 
212975_at 0.239 6.000 2.568 2.124e-02 0.228 -3.407 DENND3 DENN/MADD domain containing 3 8 142207901 AB020677 8q24.3 Hs.18166 5    
220983_s_at -0.506 4.972 -2.568 2.125e-02 0.228 -3.407 SPRY4 sprouty homolog 4 (Drosophila) 5 -141670175 NM_030964 5q31.3 Hs.323308 14

protein binding

cytoplasm

plasma membrane

multicellular organismal development

regulation of signal transduction

cell projection

negative regulation of MAP kinase activity

Jak-STAT signaling pathway

204154_at 0.807 5.867 2.568 2.126e-02 0.228 -3.408 CDO1 cysteine dioxygenase, type I 5 -115168328 NM_001801 5q22-q23 Hs.442378 12

sulfur amino acid biosynthetic process

iron ion binding

cytosol

inflammatory response

oxidoreductase activity

cysteine dioxygenase activity

taurine biosynthetic process

L-cysteine metabolic process

metal ion binding

oxidation reduction

Cysteine and methionine metabolism

Taurine and hypotaurine metabolism

Metabolic pathways

226677_at 0.551 3.758 2.567 2.127e-02 0.228 -3.408 ZNF521 zinc finger protein 521 18 -20895885 AF141339 18q11.2 Hs.116935 9    
202322_s_at -0.274 8.013 -2.567 2.128e-02 0.228 -3.409 GGPS1 geranylgeranyl diphosphate synthase 1 1 233558375, 233558491 NM_004837 1q43 Hs.719270 13

dimethylallyltranstransferase activity

farnesyltranstransferase activity

geranyltranstransferase activity

soluble fraction

cytoplasm

isoprenoid biosynthetic process

transferase activity

Terpenoid backbone biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

41856_at 0.206 7.104 2.567 2.129e-02 0.228 -3.409 UNC5B unc-5 homolog B (C. elegans) 10 72642303 AL049370 10q22.1 Hs.522997 12

receptor activity

protein binding

apoptosis

signal transduction

multicellular organismal development

membrane

integral to membrane

Axon guidance

201685_s_at -0.374 7.534 -2.567 2.129e-02 0.228 -3.409 TOX4 TOX high mobility group box family member 4 14 21015174 NM_014828 14q11.2 Hs.555910 9

DNA binding

nucleus

nucleolus

Golgi apparatus

 
235173_at -0.598 10.884 -2.566 2.132e-02 0.228 -3.410 hCG_1806964 hypothetical LOC401093 3 -153463102 AA093668 3q25.1 Hs.201858 Hs.558914 Hs.719379 3    
229655_at 0.236 3.807 2.566 2.134e-02 0.228 -3.411 FAM19A5 family with sequence similarity 19 (chemokine (C-C motif)-like), member A5 22 47263951, 47350781 N66656 22q13.32 Hs.436854 Hs.632788 8

extracellular region

membrane

integral to membrane

 
214736_s_at -0.303 7.879 -2.566 2.134e-02 0.228 -3.411 ADD1 adducin 1 (alpha) 4 2815381 BE898639 4p16.3 Hs.183706 Hs.701490 139

calmodulin binding

nucleus

cytoplasm

cytosol

cytoskeleton

plasma membrane

transcription factor binding

F-actin capping protein complex

actin cytoskeleton organization

spectrin binding

positive regulation of protein binding

protein homodimerization activity

metal ion binding

protein heterodimerization activity

actin filament binding

barbed-end actin filament capping

actin filament bundle formation

 
219595_at 0.242 5.541 2.565 2.135e-02 0.228 -3.412 ZNF26 zinc finger protein 26 12 132073128 NM_019591 12q24.33 Hs.489608 7

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
219694_at 0.272 3.245 2.565 2.137e-02 0.228 -3.412 FAM105A family with sequence similarity 105, member A 5 14634890 NM_019018 5p15.2 Hs.155085 6    
202282_at 0.287 8.494 2.565 2.138e-02 0.228 -3.413 HSD17B10 hydroxysteroid (17-beta) dehydrogenase 10 X -53474930 NM_004493 Xp11.2 Hs.171280 40

3-hydroxyacyl-CoA dehydrogenase activity

protein binding

cytoplasm

mitochondrion

plasma membrane

lipid metabolic process

tRNA processing

7-alpha-hydroxysteroid dehydrogenase activity

oxidoreductase activity

3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity

oxidation reduction

Valine, leucine and isoleucine degradation

Metabolic pathways

Alzheimer's disease

44702_at 0.243 6.734 2.565 2.138e-02 0.228 -3.413 SYDE1 synapse defective 1, Rho GTPase, homolog 1 (C. elegans) 19 15079213 R77097 19p13.12 Hs.528701 Hs.706845 2

GTPase activator activity

Rho GTPase activator activity

intracellular

signal transduction

activation of Rho GTPase activity

 
218749_s_at 0.223 6.374 2.565 2.138e-02 0.228 -3.413 SLC24A6 solute carrier family 24 (sodium/potassium/calcium exchanger), member 6 12 -112220953 NM_024959 12q24.13 Hs.286194 6

calcium ion binding

plasma membrane

ion transport

sodium ion transport

calcium ion transport

antiporter activity

integral to membrane

sodium ion binding

lithium ion binding

response to stimulus

 
228129_at -0.422 6.870 -2.564 2.140e-02 0.228 -3.414 SERBP1 SERPINE1 mRNA binding protein 1 1 -67646080 BE857133 1p31 Hs.719078 22

RNA binding

mRNA 3'-UTR binding

protein binding

nucleus

cytoplasm

regulation of mRNA stability

perinuclear region of cytoplasm

 
218700_s_at -0.271 3.285 -2.564 2.140e-02 0.228 -3.414 RAB7L1 RAB7, member RAS oncogene family-like 1 1 -204003737 BC002585 1q32 Hs.115325 8

nucleotide binding

GTPase activity

protein binding

GTP binding

plasma membrane

small GTPase mediated signal transduction

protein transport

 
200635_s_at 0.345 5.045 2.564 2.140e-02 0.228 -3.414 PTPRF protein tyrosine phosphatase, receptor type, F 1 43769133 AU145351 1p34 Hs.272062 49

receptor activity

transmembrane receptor protein tyrosine phosphatase activity

protein binding

integral to plasma membrane

protein amino acid dephosphorylation

cell adhesion

transmembrane receptor protein tyrosine phosphatase signaling pathway

membrane

hydrolase activity

Cell adhesion molecules (CAMs)

Adherens junction

Insulin signaling pathway

1557609_s_at -0.159 2.222 -2.564 2.141e-02 0.228 -3.414 TBC1D12 TBC1 domain family, member 12 10 96152175 AW188458 10q23.33 Hs.500598 6

GTPase activator activity

Rab GTPase activator activity

intracellular

regulation of Rab GTPase activity

 
203642_s_at 0.362 4.977 2.564 2.142e-02 0.228 -3.414 COBLL1 COBL-like 1 2 -165249503 NM_014900 2q24.3 Hs.470457 9    
236311_at 0.430 4.700 2.564 2.143e-02 0.229 -3.415 LOH12CR2 loss of heterozygosity, 12, chromosomal region 2 12 -12399610 BE645784 12p13.2 Hs.67553 2    
206398_s_at 0.253 4.807 2.564 2.143e-02 0.229 -3.415 CD19 CD19 molecule 16 28850760 NM_001770 16p11.2 Hs.652262 49

receptor signaling protein activity

protein binding

plasma membrane

integral to plasma membrane

cellular defense response

cell surface receptor linked signal transduction

external side of plasma membrane

B cell receptor signaling pathway

Hematopoietic cell lineage

B cell receptor signaling pathway

Primary immunodeficiency

223415_at 0.295 5.480 2.563 2.146e-02 0.229 -3.416 RPP25 ribonuclease P/MRP 25kDa subunit 15 -73034495 BC002497 15q24.2 Hs.8562 6

RNA binding

ribonuclease P activity

protein binding

nucleus

tRNA processing

hydrolase activity

 
235648_at 0.370 4.526 2.563 2.147e-02 0.229 -3.416 ZNF567 zinc finger protein 567 19 41872141 AA742659 19q13.12 Hs.412517 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
221016_s_at 0.365 5.139 2.563 2.147e-02 0.229 -3.417 TCF7L1 transcription factor 7-like 1 (T-cell specific, HMG-box) 2 85214244 NM_031283 2p11.2 Hs.516297 9

transcription factor activity

nucleus

chromatin organization

beta-catenin binding

determination of anterior/posterior axis, embryo

regulation of Wnt receptor signaling pathway

negative regulation of transcription, DNA-dependent

positive regulation of transcription from RNA polymerase II promoter, mitotic

axial mesoderm morphogenesis

stem cell differentiation

Wnt signaling pathway

Adherens junction

Melanogenesis

Pathways in cancer

Colorectal cancer

Endometrial cancer

Prostate cancer

Thyroid cancer

Basal cell carcinoma

Acute myeloid leukemia

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

205459_s_at 0.290 5.769 2.563 2.148e-02 0.229 -3.417 NPAS2 neuronal PAS domain protein 2 2 100803044 NM_002518 2q11.2 Hs.156832 Hs.705895 23

transcription factor activity

signal transducer activity

nucleus

transcription factor complex

regulation of transcription, DNA-dependent

signal transduction

central nervous system development

circadian sleep/wake cycle

locomotor rhythm

positive regulation of transcription from RNA polymerase II promoter

rhythmic process

Hsp90 protein binding

Circadian rhythm - mammal

226682_at -0.503 8.536 -2.562 2.148e-02 0.229 -3.417 RORA RAR-related orphan receptor A 15 -58567776, -58567776, -58567776 AW006185 15q22.2 Hs.560343 Hs.655155 33

transcription factor activity

steroid hormone receptor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

nitric oxide biosynthetic process

signal transduction

zinc ion binding

cerebellar Purkinje cell differentiation

regulation of macrophage activation

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

cGMP metabolic process

metal ion binding

 
228482_at 0.326 3.801 2.562 2.149e-02 0.229 -3.417 CDRT4 CMT1A duplicated region transcript 4 17 -15280062 AV702789 17p12 Hs.164595 4    
236430_at 0.322 3.811 2.562 2.149e-02 0.229 -3.417 TMED6 transmembrane emp24 protein transport domain containing 6 16 -67934660 AA708152 16q22.1 Hs.658619 3

endoplasmic reticulum

transport

membrane

integral to membrane

 
203068_at -0.412 7.532 -2.562 2.149e-02 0.229 -3.417 KLHL21 kelch-like 21 (Drosophila) 1 -6573370 NM_014851 1p36.31 Hs.7764 5

protein binding

modification-dependent protein catabolic process

 
223262_s_at -0.278 6.171 -2.562 2.152e-02 0.229 -3.418 FGFR1OP2 FGFR1 oncogene partner 2 12 26982582 AI738434 12p11.23 Hs.591162 5

cytoplasm

 
232235_at 0.496 2.882 2.562 2.152e-02 0.229 -3.419 DSEL dermatan sulfate epimerase-like 18 -63324798 AK021539 18q22.1 Hs.124673 6

membrane

integral to membrane

 
1555543_a_at -0.408 5.470 -2.561 2.153e-02 0.229 -3.419 CLCC1 chloride channel CLIC-like 1 1 -109273652 AB052917 1p13.3 Hs.658489 6

nucleus

endoplasmic reticulum

Golgi apparatus

membrane

integral to membrane

 
227728_at -0.357 9.606 -2.561 2.154e-02 0.229 -3.419 PPM1A protein phosphatase 1A (formerly 2C), magnesium-dependent, alpha isoform 14 59782222, 59785718, 59785718 AA886888 14q23.1 Hs.130036 28

magnesium ion binding

protein serine/threonine phosphatase activity

signal transducer activity

cellular_component

membrane fraction

voltage-gated calcium channel complex

protein amino acid dephosphorylation

protein C-terminus binding

protein serine/threonine phosphatase complex

hydrolase activity

manganese ion binding

positive regulation of Wnt receptor signaling pathway

neuron projection

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of transcription, DNA-dependent

MAPK signaling pathway

235154_at -0.227 6.452 -2.561 2.155e-02 0.229 -3.420 TAF3 TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa 10 7900678 BG250498 10p15.1 Hs.527688 Hs.709995 12

DNA binding

protein binding

nucleus

transcription factor TFIID complex

zinc ion binding

regulation of transcription

metal ion binding

maintenance of protein location in nucleus

 
242071_x_at 0.270 6.140 2.561 2.156e-02 0.229 -3.420 ITGA8 integrin, alpha 8 10 -15599093 BF446919 10p13 Hs.171311 15

metanephros development

receptor activity

calcium ion binding

protein binding

cell-matrix adhesion

integrin-mediated signaling pathway

multicellular organismal development

nervous system development

memory

integrin complex

membrane

integral to membrane

cell-cell adhesion

cell projection organization

cell differentiation

extracellular matrix organization

positive regulation of transforming growth factor beta receptor signaling pathway

inner ear morphogenesis

apical part of cell

Focal adhesion

ECM-receptor interaction

Cell adhesion molecules (CAMs)

Regulation of actin cytoskeleton

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

205993_s_at 0.207 5.742 2.561 2.156e-02 0.229 -3.420 TBX2 T-box 2 17 56832038 NM_005994 17q23 Hs.531085 25

negative regulation of transcription from RNA polymerase II promoter

heart morphogenesis

transcription factor activity

protein binding

nucleus

transcription factor complex

multicellular organismal development

muscle cell fate determination

cell aging

positive regulation of cell proliferation

transcription repressor activity

mammary gland development

sequence-specific DNA binding

cardiac muscle tissue development

 
227074_at 0.335 6.817 2.560 2.158e-02 0.229 -3.421 LOC100131564 hypothetical protein LOC100131564 1   AA524669 1p22.1 Hs.648647      
201723_s_at -0.406 8.049 -2.560 2.158e-02 0.229 -3.421 GALNT1 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) 18 31488530 U41514 18q12.1 Hs.514806 26

polypeptide N-acetylgalactosaminyltransferase activity

calcium ion binding

sugar binding

extracellular region

Golgi apparatus

membrane

integral to membrane

transferase activity, transferring glycosyl groups

protein amino acid O-linked glycosylation via serine

protein amino acid O-linked glycosylation via threonine

manganese ion binding

perinuclear region of cytoplasm

O-Glycan biosynthesis

Metabolic pathways

220348_at -0.326 4.413 -2.560 2.158e-02 0.229 -3.421 KLHL29 kelch-like 29 (Drosophila) 2   NM_025067 2p24.1 Hs.130593 5

protein binding

 
236418_at 0.295 3.931 2.560 2.158e-02 0.229 -3.421 TTLL10 tubulin tyrosine ligase-like family, member 10 1 1099148, 1104939 AW772075 1p36.33 Hs.454835 4

tubulin-tyrosine ligase activity

cytoplasm

cytoskeleton

microtubule

protein modification process

ligase activity

protein polyglycylation

protein-glycine ligase activity

 
223465_at -0.457 6.401 -2.560 2.158e-02 0.229 -3.421 COL4A3BP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein 5 -74702683, -74702683 BE967275 5q13.3 Hs.270437 26

protein kinase activity

protein binding

cellular_component

cytoplasm

endoplasmic reticulum

Golgi apparatus

protein amino acid phosphorylation

lipid transport

immune response

 
207317_s_at 0.659 10.568 2.560 2.158e-02 0.229 -3.421 CASQ2 calsequestrin 2 (cardiac muscle) 1 -116044148 NM_001232 1p13.3-p11 Hs.57975 37

calcium ion binding

striated muscle contraction

heart development

sarcoplasmic reticulum lumen

 
204461_x_at -0.434 7.606 -2.560 2.159e-02 0.229 -3.421 RAD1 RAD1 homolog (S. pombe) 5 -34941124, -34941122 NM_002853 5p13.2 Hs.38114 44

cell cycle checkpoint

DNA damage checkpoint

damaged DNA binding

protein binding

nucleus

DNA replication

DNA repair

response to DNA damage stimulus

meiotic prophase I

3'-5' exonuclease activity

3'-5' exonuclease activity

exodeoxyribonuclease III activity

hydrolase activity

 
1553281_at 0.167 5.130 2.560 2.161e-02 0.229 -3.422 PLCXD2 phosphatidylinositol-specific phospholipase C, X domain containing 2 3 112876196, 112876196 NM_153268 3q13.2 Hs.655022 2

phospholipase C activity

signal transducer activity

intracellular signaling cascade

lipid catabolic process

hydrolase activity

 
218160_at 0.335 10.633 2.559 2.162e-02 0.229 -3.423 NDUFA8 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa 9 -123946158 NM_014222 9q33.2-q34.11 Hs.495039 12

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

transport

NADH dehydrogenase (ubiquinone) activity

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

204428_s_at 0.373 5.478 2.559 2.163e-02 0.229 -3.423 LCAT lecithin-cholesterol acyltransferase 16 -66531287 NM_000229 16q22.1 Hs.387239 93

phosphatidylcholine-sterol O-acyltransferase activity

phospholipase A2 activity

protein binding

extracellular space

lipid metabolic process

phospholipid metabolic process

phosphatidylcholine biosynthetic process

steroid metabolic process

cholesterol metabolic process

acyltransferase activity

transferase activity

apolipoprotein A-I binding

high-density lipoprotein particle

very-low-density lipoprotein particle remodeling

high-density lipoprotein particle remodeling

cholesterol esterification

lipoprotein biosynthetic process

cholesterol homeostasis

reverse cholesterol transport

response to copper ion

response to glucocorticoid stimulus

Glycerophospholipid metabolism

211570_s_at -0.325 6.748 -2.559 2.163e-02 0.229 -3.423 RAPSN receptor-associated protein of the synapse 11 -47415890 BC004196 11p11.2-p11.1 Hs.81218 32

protein binding

cytoplasm

Golgi apparatus

cytoskeleton

plasma membrane

synaptic transmission

zinc ion binding

cell junction

neuromuscular junction

acetylcholine receptor binding

postsynaptic membrane

metal ion binding

 
201508_at 0.361 5.355 2.559 2.164e-02 0.229 -3.424 IGFBP4 insulin-like growth factor binding protein 4 17 35853201 NM_001552 17q12-q21.1 Hs.462998 55

skeletal system development

regulation of cell growth

insulin-like growth factor binding

extracellular region

extracellular space

DNA metabolic process

inflammatory response

signal transduction

cell proliferation

 
200849_s_at -0.381 9.078 -2.559 2.164e-02 0.229 -3.424 AHCYL1 adenosylhomocysteinase-like 1 1 110328830 AI589266 1p13.2 Hs.705418 15

adenosylhomocysteinase activity

binding

endoplasmic reticulum

one-carbon metabolic process

metabolic process

hydrolase activity

Cysteine and methionine metabolism

Selenoamino acid metabolism

Metabolic pathways

202187_s_at -0.388 8.106 -2.558 2.165e-02 0.229 -3.424 PPP2R5A protein phosphatase 2, regulatory subunit B', alpha isoform 1 210525501 NM_006243 1q32.2-q32.3 Hs.716433 41

protein phosphatase type 2A complex

chromosome, centromeric region

protein binding

nucleus

cytoplasm

signal transduction

protein phosphatase type 2A regulator activity

Wnt signaling pathway

201881_s_at -0.399 7.217 -2.558 2.165e-02 0.229 -3.424 ARIH1 ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila) 15 70553720 NM_005744 15q24 Hs.268787 11

ubiquitin ligase complex

protein binding

cytoplasm

ubiquitin-dependent protein catabolic process

zinc ion binding

small conjugating protein ligase activity

metal ion binding

 
211726_s_at 0.685 6.169 2.558 2.167e-02 0.229 -3.425 FMO2 flavin containing monooxygenase 2 (non-functional) 1 169421011 BC005894 1q23-q25 Hs.144912 18

magnesium ion binding

monooxygenase activity

flavin-containing monooxygenase activity

endoplasmic reticulum

microsome

oxygen and reactive oxygen species metabolic process

membrane

integral to membrane

intrinsic to endoplasmic reticulum membrane

FAD binding

NADP or NADPH binding

oxidation reduction

Drug metabolism - cytochrome P450

222847_s_at -0.313 5.277 -2.558 2.167e-02 0.229 -3.425 EGLN3 egl nine homolog 3 (C. elegans) 14 -33463171 AI378406 14q13.1 Hs.135507 26

iron ion binding

protein binding

nucleus

cytoplasm

apoptosis

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

L-ascorbic acid binding

metal ion binding

oxidation reduction

Pathways in cancer

Renal cell carcinoma

220532_s_at 0.582 4.994 2.558 2.167e-02 0.229 -3.425 TMEM176B transmembrane protein 176B 7 -150119308, -150119308, -150119308 NM_014020 7q36.1 Hs.647090 Hs.709505 7

nucleus

organ morphogenesis

membrane

integral to membrane

cell differentiation

 
233555_s_at 0.325 4.344 2.558 2.167e-02 0.229 -3.425 SULF2 sulfatase 2 20 -45719556, -45719556 AL034418 20q12-q13.2 Hs.162016 16

arylsulfatase activity

calcium ion binding

extracellular space

endoplasmic reticulum

Golgi apparatus

Golgi stack

metabolic process

cell surface

hydrolase activity

heparan sulfate proteoglycan metabolic process

 
225011_at -0.277 10.432 -2.558 2.169e-02 0.229 -3.426 PRKAR2A protein kinase, cAMP-dependent, regulatory, type II, alpha 3 -48763096 AK026351 3p21.3-p21.2 Hs.631923 81

nucleotide binding

regulation of protein amino acid phosphorylation

membrane fraction

cytoplasm

plasma membrane

cAMP-dependent protein kinase complex

cAMP-dependent protein kinase regulator activity

hormone-mediated signaling

cAMP binding

Apoptosis

Insulin signaling pathway

201141_at 0.786 8.268 2.557 2.170e-02 0.229 -3.426 GPNMB glycoprotein (transmembrane) nmb 7 23252840 NM_002510 7p15 Hs.190495 24

osteoblast differentiation

integrin binding

integral to plasma membrane

cell adhesion

heparin binding

negative regulation of cell proliferation

membrane

cytoplasmic membrane-bounded vesicle

bone mineralization

melanosome

 
213694_at -0.440 6.555 -2.557 2.171e-02 0.229 -3.427 RSBN1 round spermatid basic protein 1 1 -114105976 AW027347 1p13.2 Hs.486285 6

protein binding

nucleus

 
202675_at 0.321 10.423 2.557 2.171e-02 0.229 -3.427 SDHB succinate dehydrogenase complex, subunit B, iron sulfur (Ip) 1 -17217811 NM_003000 1p36.1-p35 Hs.465924 62

iron ion binding

protein binding

mitochondrion

mitochondrial inner membrane

mitochondrial inner membrane

tricarboxylic acid cycle

transport

succinate dehydrogenase (ubiquinone) activity

electron carrier activity

membrane

oxidoreductase activity

electron transport chain

metal ion binding

2 iron, 2 sulfur cluster binding

3 iron, 4 sulfur cluster binding

4 iron, 4 sulfur cluster binding

Citrate cycle (TCA cycle)

Oxidative phosphorylation

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

237847_at 0.217 5.575 2.557 2.173e-02 0.229 -3.427 NTN1 netrin 1 17 8865583 BF058964 17p13-p12 Hs.660885 29

neuron migration

protein binding

extracellular region

basement membrane

cytoplasm

apoptosis

axon guidance

positive regulation of cell proliferation

regulation of cell migration

negative regulation of axon extension

mammary gland development

establishment of nucleus localization

positive regulation of axon extension

Axon guidance

226112_at -0.506 9.498 -2.557 2.173e-02 0.229 -3.428 SGCB sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) 4 -52581617 AI678717 4q12 Hs.438953 28

cytoplasm

cytoskeleton

plasma membrane

integral to plasma membrane

cytoskeleton organization

muscle organ development

sarcoglycan complex

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

202354_s_at 0.222 5.134 2.556 2.174e-02 0.229 -3.428 GTF2F1 general transcription factor IIF, polypeptide 1, 74kDa 19 -6330579 AW190445 19p13.3 Hs.68257 79

nuclear mRNA splicing, via spliceosome

DNA binding

transcription coactivator activity

catalytic activity

nucleus

nucleoplasm

transcription factor TFIIF complex

transcription initiation from RNA polymerase II promoter

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

transcription factor binding

general RNA polymerase II transcription factor activity

positive regulation of transcription

Basal transcription factors

206469_x_at 0.232 6.145 2.556 2.174e-02 0.229 -3.428 AKR7A3 aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase) 1 -19481643 NM_012067 1p36.13 Hs.6980 6

aldo-keto reductase activity

cytoplasm

cytosol

cellular aldehyde metabolic process

electron carrier activity

oxidoreductase activity

oxidation reduction

 
208962_s_at 0.341 4.666 2.556 2.175e-02 0.229 -3.428 FADS1 fatty acid desaturase 1 11 -61323678 BE540552 11q12.2-q13.1 Hs.503546 30

C-5 sterol desaturase activity

protein binding

membrane fraction

endoplasmic reticulum

microsome

unsaturated fatty acid biosynthetic process

transport

cell-cell signaling

phospholipid biosynthetic process

cellular response to starvation

membrane

integral to membrane

oxidoreductase activity

heme binding

electron transport chain

regulation of transcription

regulation of cell differentiation

icosanoid biosynthetic process

Biosynthesis of unsaturated fatty acids

223119_s_at -0.454 8.043 -2.556 2.177e-02 0.230 -3.429 USP47 ubiquitin specific peptidase 47 11 11819545 BC000226 11p15.3 Hs.577256 12

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
213001_at -0.532 7.322 -2.556 2.177e-02 0.230 -3.429 ANGPTL2 angiopoietin-like 2 9 -128889448 AF007150 9q34 Hs.653262 11

receptor binding

extracellular region

extracellular space

signal transduction

multicellular organismal development

 
214444_s_at 0.250 5.070 2.555 2.178e-02 0.230 -3.430 PVR poliovirus receptor 19 49838937, 49838937 NM_006505 19q13.2 Hs.171844 46

positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target

receptor activity

extracellular region

extracellular space

cytoplasm

plasma membrane

plasma membrane

cell adhesion

cell surface

integral to membrane

susceptibility to natural killer cell mediated cytotoxicity

interspecies interaction between organisms

cell adhesion molecule binding

susceptibility to T cell mediated cytotoxicity

Cell adhesion molecules (CAMs)

219239_s_at -0.406 5.272 -2.555 2.179e-02 0.230 -3.430 ZNF654 zinc finger protein 654 3 88270951 NM_018293 3p11.1 Hs.591650 Hs.661116 1

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
1557136_at 0.247 4.183 2.555 2.179e-02 0.230 -3.430 ATP13A4 ATPase type 13A4 3 -194602559 BG059633 3q29 Hs.674423 4

nucleotide binding

magnesium ion binding

ATP binding

ATP biosynthetic process

cation transport

ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism

membrane

integral to membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

ATPase activity

 
218878_s_at -0.530 7.025 -2.555 2.180e-02 0.230 -3.430 SIRT1 sirtuin (silent mating type information regulation 2 homolog) 1 (S. cerevisiae) 10 69314432, 69314944 NM_012238 10q21.3 Hs.369779 128

ovulation from ovarian follicle

p53 binding

transcription corepressor activity

NAD+ ADP-ribosyltransferase activity

nucleus

nuclear envelope

nucleolus

cytoplasm

DNA replication

DNA repair

establishment of chromatin silencing

maintenance of chromatin silencing

protein amino acid ADP-ribosylation

triglyceride mobilization

response to DNA damage stimulus

multicellular organismal development

spermatogenesis

muscle organ development

cell aging

protein C-terminus binding

zinc ion binding

cellular response to starvation

negative regulation of transcription

histone deacetylation

PML body

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides

NAD-dependent histone deacetylase activity

deacetylase activity

protein domain specific binding

cell differentiation

positive regulation of chromatin silencing

regulation of protein import into nucleus, translocation

regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor

peptidyl-lysine deacetylation

regulation of cell proliferation

histone binding

identical protein binding

regulation of apoptosis

negative regulation of transcription factor activity

negative regulation of DNA damage response, signal transduction by p53 class mediator

interspecies interaction between organisms

negative regulation of fat cell differentiation

positive regulation of anti-apoptosis

metal ion binding

white fat cell differentiation

negative regulation of helicase activity

NAD binding

 
1565661_x_at 0.281 5.480 2.555 2.181e-02 0.230 -3.431 FUT6 fucosyltransferase 6 (alpha (1,3) fucosyltransferase) 19 -5781636 BC040472 19p13.3 Hs.631846 Hs.705615 19

Golgi apparatus

protein amino acid glycosylation

membrane

integral to membrane

transferase activity, transferring glycosyl groups

3-galactosyl-N-acetylglucosaminide 4-alpha-L-fucosyltransferase activity

L-fucose catabolic process

alpha(1,3)-fucosyltransferase activity

Glycosphingolipid biosynthesis - lacto and neolacto series

Metabolic pathways

212950_at 0.364 8.072 2.555 2.182e-02 0.230 -3.431 GPR116 G protein-coupled receptor 116 6 -46928203, -46928203 BF941499 6p12.3 Hs.362806 18

G-protein coupled receptor activity

G-protein coupled receptor activity

plasma membrane

neuropeptide signaling pathway

integral to membrane

integral to membrane

 
209949_at 0.169 4.142 2.555 2.182e-02 0.230 -3.431 NCF2 neutrophil cytosolic factor 2 1 -181791319, -181791319 BC001606 1q25 Hs.587558 71

acrosomal vesicle

nucleolus

cytoplasm

cellular defense response

protein C-terminus binding

electron carrier activity

superoxide-generating NADPH oxidase activity

superoxide anion generation

NADPH oxidase complex

innate immune response

respiratory burst

Rac GTPase binding

Leukocyte transendothelial migration

243296_at -0.634 5.401 -2.554 2.183e-02 0.230 -3.431 NAMPT nicotinamide phosphoribosyltransferase 7 -105675967 AA873350 7q22.3 Hs.489615 98

cytokine activity

cytoplasm

cytosol

signal transduction

cell-cell signaling

positive regulation of cell proliferation

NAD biosynthetic process

transferase activity, transferring glycosyl groups

pyridine nucleotide biosynthetic process

nicotinamide phosphoribosyltransferase activity

nicotinamide phosphoribosyltransferase activity

Nicotinate and nicotinamide metabolism

203580_s_at -0.324 8.015 -2.554 2.183e-02 0.230 -3.431 SLC7A6 solute carrier family 7 (cationic amino acid transporter, y+ system), member 6 16 66855923 NM_003983 16q22.1 Hs.653193 Hs.709557 6

plasma membrane

integral to plasma membrane

protein complex assembly

cellular amino acid metabolic process

transport

amino acid transport

amino acid transmembrane transporter activity

antiporter activity

 
204069_at -0.548 4.800 -2.554 2.183e-02 0.230 -3.432 MEIS1 Meis homeobox 1 2 66516035 NM_002398 2p14-p13 Hs.526754 Hs.603755 42

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

sequence-specific DNA binding

 
211194_s_at -0.318 4.551 -2.554 2.185e-02 0.230 -3.432 TP63 tumor protein p63 3 190831909, 190831909, 190990142, 190990142 AB010153 3q28 Hs.137569 238

response to tumor cell

transcription factor activity

nucleus

nucleus

cytoplasm

apoptosis

induction of apoptosis

multicellular organismal development

zinc ion binding

transcription activator activity

transcription activator activity

transcription repressor activity

negative regulation of cell growth

identical protein binding

positive regulation of Notch signaling pathway

negative regulation of transcription, DNA-dependent

positive regulation of transcription, DNA-dependent

metal ion binding

protein homotetramerization

 
212366_at -0.327 5.848 -2.554 2.185e-02 0.230 -3.432 ZNF292 zinc finger protein 292 6 87921987 BF223237 6q14.3 Hs.485892 Hs.656621 7

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
214503_x_at 0.213 4.075 2.554 2.185e-02 0.230 -3.432 GPR135 G protein-coupled receptor 135 14 -58999992 NM_022571 14q23.1 Hs.647573 5

receptor activity

G-protein coupled receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

integral to membrane

 
221538_s_at 0.405 6.832 2.554 2.185e-02 0.230 -3.432 PLXNA1 plexin A1 3 128190191 AL136663 3q21.3 Hs.432329 18

receptor activity

protein binding

cellular_component

intracellular

membrane fraction

signal transduction

multicellular organismal development

membrane

integral to membrane

semaphorin receptor activity

Axon guidance

207987_s_at 0.247 2.780 2.554 2.186e-02 0.230 -3.433 GNRH1 gonadotropin-releasing hormone 1 (luteinizing-releasing hormone) 8 -25332690 NM_000825 8p21-p11.2 Hs.82963 66

gonadotropin hormone-releasing hormone activity

extracellular region

soluble fraction

signal transduction

cell-cell signaling

multicellular organismal development

negative regulation of cell proliferation

regulation of gene expression

response to ethanol

response to steroid hormone stimulus

GnRH signaling pathway

202920_at -0.445 9.060 -2.554 2.186e-02 0.230 -3.433 ANK2 ankyrin 2, neuronal 4 113958687, 114190233 BF726212 4q25-q27 Hs.620557 39

protein binding

cytoplasm

cytoskeleton

plasma membrane

signal transduction

basolateral plasma membrane

apical plasma membrane

M band

 
219913_s_at -0.424 6.603 -2.554 2.186e-02 0.230 -3.433 CRNKL1 crooked neck pre-mRNA splicing factor-like 1 (Drosophila) 20 -19963011 NM_016652 20p11.2 Hs.171342 7

spliceosome assembly

RNA binding

intracellular

nucleus

spliceosomal complex

cytoplasm

mRNA processing

RNA splicing

nuclear speck

 
202611_s_at -0.634 6.688 -2.553 2.189e-02 0.230 -3.434 MED14 mediator complex subunit 14 X -40393738 AI971089 Xp11.4-p11.2 Hs.407604 33

receptor activity

protein binding

nucleus

transcription initiation from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

ligand-dependent nuclear receptor transcription coactivator activity

androgen receptor signaling pathway

vitamin D receptor binding

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

thyroid hormone receptor binding

 
213342_at 0.256 5.299 2.553 2.191e-02 0.230 -3.435 YAP1 Yes-associated protein 1, 65kDa 11 101486419 AI745185 11q13 Hs.503692 46

protein binding

 
219493_at 0.400 4.573 2.552 2.192e-02 0.230 -3.435 SHCBP1 SHC SH2-domain binding protein 1 16 -45171968 NM_024745 16q11.2 Hs.123253 17

protein binding

SH2 domain binding

 
206774_at 0.359 5.197 2.552 2.192e-02 0.230 -3.435 FRMPD1 FERM and PDZ domain containing 1 9 37641051 NM_014907 9p13.2 Hs.163990 4

protein binding

cytoplasm

cytosol

cytoskeleton

plasma membrane

 
1569843_at 0.309 2.590 2.552 2.193e-02 0.230 -3.435 DYNC1I1 dynein, cytoplasmic 1, intermediate chain 1 7 95239753 BC012504 7q21.3-q22.1 Hs.440364 17

microtubule motor activity

protein binding

cytoplasmic dynein complex

microtubule

microtubule binding

vesicle transport along microtubule

perinuclear region of cytoplasm

 
230536_at 0.170 4.133 2.552 2.193e-02 0.230 -3.435 PBX4 pre-B-cell leukemia homeobox 4 19 -19533521 AJ300182 19p12 Hs.466257 7

XY body

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

transcription activator activity

sequence-specific DNA binding

 
244861_at 0.218 6.374 2.552 2.193e-02 0.230 -3.436 ZNF527 zinc finger protein 527 19 42553898 AI679883 19q13.1 Hs.590940 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
212719_at -0.400 3.788 -2.552 2.195e-02 0.230 -3.436 PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 18 58533713 AB011178 18q21.33 Hs.465337 13

protein serine/threonine phosphatase activity

protein binding

nucleus

cytoplasm

cytosol

apoptosis

membrane

hydrolase activity

manganese ion binding

metal ion binding

 
34210_at 0.373 3.347 2.552 2.195e-02 0.230 -3.436 CD52 CD52 molecule 1 26516997 N90866 1p36 Hs.276770 27

membrane fraction

plasma membrane

integral to plasma membrane

elevation of cytosolic calcium ion concentration

anchored to membrane

respiratory burst

 
1559399_s_at 0.507 4.963 2.552 2.195e-02 0.230 -3.436 ZCCHC10 zinc finger, CCHC domain containing 10 5 -132360575 BC015986 5q31.1 Hs.29700 5

nucleic acid binding

zinc ion binding

metal ion binding

 
212373_at -0.475 5.730 -2.552 2.195e-02 0.230 -3.437 FEM1B fem-1 homolog b (C. elegans) 15 66357194 AW139179 15q22 Hs.362733 9

ubiquitin-protein ligase activity

death receptor binding

death receptor binding

cellular_component

cytoplasm

induction of apoptosis

modification-dependent protein catabolic process

regulation of apoptosis

regulation of ubiquitin-protein ligase activity

 
208934_s_at 0.250 5.451 2.551 2.197e-02 0.230 -3.437 LGALS8 lectin, galactoside-binding, soluble, 8 1 234748187, 234753361, 234753699 AF342815 1q42-q43 Hs.4082 Hs.708114 29

sugar binding

extracellular space

cytoplasm

 
242294_at -0.354 5.493 -2.550 2.200e-02 0.230 -3.439 FBXO45 F-box protein 45 3 197780121 AA973128 3q29 Hs.169815 2

modification-dependent protein catabolic process

 
221785_at 0.282 5.425 2.550 2.203e-02 0.231 -3.440 WIZ widely interspaced zinc finger motifs 19 -15393317 AI828531 19p13.1 Hs.442138 6

intracellular

nucleus

zinc ion binding

metal ion binding

 
228709_at -0.340 4.716 -2.549 2.207e-02 0.231 -3.441 TPR translocated promoter region (to activated MET oncogene) 1 -184547408 BF109993 1q25 Hs.279640 30

nucleotide binding

kinetochore

serine-tRNA ligase activity

protein binding

ATP binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

translation

seryl-tRNA aminoacylation

protein import into nucleus

mitotic cell cycle spindle assembly checkpoint

protein transport

membrane

mRNA transport

intracellular protein transmembrane transport

Pathways in cancer

Thyroid cancer

219024_at -0.444 6.599 -2.549 2.207e-02 0.231 -3.441 PLEKHA1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 10 124124209, 124141832 NM_021622 10q26.13 Hs.643512 16

phospholipid binding

cellular_component

nucleus

cytoplasm

plasma membrane

biological_process

 
222875_at 0.288 6.775 2.549 2.207e-02 0.231 -3.441 DHX33 DEAH (Asp-Glu-Ala-His) box polypeptide 33 17 -5286314 AI720923 17p13.2 Hs.250456 4

nucleotide binding

nucleic acid binding

helicase activity

ATP binding

nucleus

nucleolus

ATP-dependent helicase activity

hydrolase activity

 
203046_s_at 0.244 4.958 2.549 2.208e-02 0.231 -3.442 TIMELESS timeless homolog (Drosophila) 12 -55096424 NM_003920 12q12-q13 Hs.118631 28

nuclear chromatin

morphogenesis of an epithelium

protein binding

nucleus

response to DNA damage stimulus

cell cycle

mitosis

multicellular organismal development

circadian rhythm

detection of abiotic stimulus

negative regulation of transcription

regulation of S phase

regulation of cell proliferation

cell division

 
218393_s_at -0.282 6.287 -2.548 2.210e-02 0.231 -3.442 SMU1 smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) 9 -33031849 NM_018225 9p12 Hs.655351 10

nucleus

cytoplasm

 
1555214_a_at 0.225 3.808 2.548 2.210e-02 0.231 -3.443 CLEC7A C-type lectin domain family 7, member A 12 -10171188, -10160646 AF400602 12p13.2 Hs.143929 30

binding

sugar binding

cytoplasm

phagocytosis, recognition

inflammatory response

pattern recognition receptor activity

carbohydrate mediated signaling

membrane

integral to membrane

T cell activation

MHC protein binding

defense response to protozoan

innate immune response

 
213514_s_at -0.257 6.710 -2.548 2.211e-02 0.231 -3.443 DIAPH1 diaphanous homolog 1 (Drosophila) 5 -140874771 AU158818 5q31 Hs.529451 33

actin binding

receptor binding

cytoplasm

cytoskeleton

plasma membrane

sensory perception of sound

cellular component organization

Rho GTPase binding

actin cytoskeleton organization

ruffle membrane

cell projection

Focal adhesion

Regulation of actin cytoskeleton

212932_at -0.270 5.754 -2.548 2.212e-02 0.231 -3.443 RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 2 135526322 AK022494 2q21.3 Hs.306327 17

GTPase activator activity

Rab GTPase activator activity

soluble fraction

cytoplasm

Rab GTPase binding

regulation of GTPase activity

 
227112_at -0.436 7.923 -2.548 2.212e-02 0.231 -3.443 TMCC1 transmembrane and coiled-coil domain family 1 3 -130849324, -130849324 AW270037 3q22.1 Hs.477547 Hs.709936 6

membrane

integral to membrane

 
208731_at -0.450 9.818 -2.548 2.212e-02 0.231 -3.444 RAB2A RAB2A, member RAS oncogene family 8 61592112 AU158062 8q12.1 Hs.369017 19

nucleotide binding

GTPase activity

GTP binding

endoplasmic reticulum

Golgi apparatus

ER to Golgi vesicle-mediated transport

small GTPase mediated signal transduction

protein transport

membrane

vesicle-mediated transport

melanosome

 
210839_s_at 0.329 5.512 2.547 2.214e-02 0.231 -3.444 ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 8 -120638500, -120638499 D45421 8q24.1 Hs.190977 47

nucleic acid binding

phosphodiesterase I activity

nucleotide diphosphatase activity

extracellular region

plasma membrane

integral to plasma membrane

phosphate metabolic process

cell motion

chemotaxis

G-protein coupled receptor protein signaling pathway

transcription factor binding

metabolic process

lipid catabolic process

hydrolase activity

metal ion binding

alkylglycerophosphoethanolamine phosphodiesterase activity

Ether lipid metabolism

204711_at 0.219 5.867 2.547 2.214e-02 0.231 -3.444 KIAA0753 KIAA0753 17 -6422368 NM_014804 17p13.2-p13.1 Hs.28070 3    
65591_at -0.247 6.971 -2.547 2.215e-02 0.231 -3.445 WDR48 WD repeat domain 48 3 39068510 N64681 3p21.33 Hs.109778 9

protein binding

nucleus

cytoplasm

lysosome

protein deubiquitination

modification-dependent protein catabolic process

interspecies interaction between organisms

 
200824_at 0.309 8.832 2.547 2.215e-02 0.231 -3.445 GSTP1 glutathione S-transferase pi 1 11 67107641 NM_000852 11q13 Hs.523836 788

glutathione transferase activity

protein binding

cytoplasm

anti-apoptosis

central nervous system development

metabolic process

transferase activity

Glutathione metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

Pathways in cancer

Prostate cancer

230273_at 0.223 5.960 2.546 2.219e-02 0.232 -3.446 C6orf165 chromosome 6 open reading frame 165 6 88174439, 88174449 AI798983 6q15 Hs.82921 5    
230694_at 0.243 4.101 2.546 2.219e-02 0.232 -3.446 SLC35E2 solute carrier family 35, member E2 1 -1653540 AI340341 1p36.33 Hs.707620 Hs.718607 3    
218403_at -0.262 9.088 -2.546 2.219e-02 0.232 -3.446 TRIAP1 TP53 regulated inhibitor of apoptosis 1 12 -119366146 NM_016399 12q24.31 Hs.69499 7

protein binding

cytoplasm

mitochondrion

apoptosis

anti-apoptosis

DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest

caspase inhibitor activity

perinuclear region of cytoplasm

 
233885_at 0.250 4.876 2.546 2.220e-02 0.232 -3.447 SNX26 sorting nexin 26 19 40958315 AC002398 19q13.12 Hs.515364 13

GTPase activator activity

protein binding

intracellular

signal transduction

protein transport

phosphoinositide binding

 
223345_at 0.235 5.606 2.546 2.221e-02 0.232 -3.447 HDAC8 histone deacetylase 8 X -71466090 AF230097 Xq13 Hs.310536 23

histone deacetylase complex

negative regulation of transcription from RNA polymerase II promoter

nuclear chromosome

histone deacetylase activity

nucleus

cytoplasm

chromatin assembly or disassembly

transcription factor binding

chromatin modification

histone deacetylation

hydrolase activity

regulation of transcription

 
228199_at 0.250 5.370 2.546 2.221e-02 0.232 -3.447 LOC729234 fumarylacetoacetate hydrolase domain containing 2 pseudogene 2 96040025 AI271418 2q11.1 Hs.348629 2    
230281_at 0.399 5.406 2.545 2.224e-02 0.232 -3.448 C16orf46 chromosome 16 open reading frame 46 16 -79652085, -79644602 AI921002 16q23.2 Hs.658684 4    
238574_at 0.306 6.272 2.545 2.224e-02 0.232 -3.448 MCART1 mitochondrial carrier triple repeat 1 9 -37877593, -37867571 BF724944 9p13.3-p12 Hs.645492 Hs.719380 6

binding

mitochondrion

mitochondrial inner membrane

transport

membrane

integral to membrane

 
221436_s_at 0.213 4.884 2.545 2.224e-02 0.232 -3.448 CDCA3 cell division cycle associated 3 12 -6828232 NM_031299 12p13 Hs.524216 8

molecular_function

cellular_component

cytoplasm

cytosol

cell cycle

mitosis

biological_process

modification-dependent protein catabolic process

cell division

 
237884_x_at -0.525 2.725 -2.545 2.225e-02 0.232 -3.449 TRPM7 transient receptor potential cation channel, subfamily M, member 7 15 -48639781 BF939551 15q21 Hs.512894 45

nucleotide binding

ruffle

actin binding

protein serine/threonine kinase activity

ion channel activity

calcium channel activity

calcium ion binding

protein binding

ATP binding

plasma membrane

ion transport

calcium ion transport

zinc ion binding

integral to membrane

kinase activity

calcium-dependent cell-matrix adhesion

transferase activity

myosin binding

actomyosin structure organization

protein amino acid autophosphorylation

 
205110_s_at -0.635 8.152 -2.545 2.226e-02 0.232 -3.449 FGF13 fibroblast growth factor 13 X -137541401, -137541401, -137541401, -137541401 NM_004114 Xq26.3 Hs.6540 Hs.711551 13

MAPKKK cascade

protein binding

nucleus

cytoplasm

signal transduction

cell-cell signaling

nervous system development

growth factor activity

protein kinase activator activity

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

201632_at -0.235 7.777 -2.545 2.226e-02 0.232 -3.449 EIF2B1 eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa 12 -122671522 NM_001414 12q24.31 Hs.716475 26

translation initiation factor activity

guanyl-nucleotide exchange factor activity

protein binding

membrane fraction

cytoplasm

eukaryotic translation initiation factor 2B complex

plasma membrane

translational initiation

response to heat

response to heat

response to glucose stimulus

oligodendrocyte development

response to peptide hormone stimulus

cellular metabolic process

cellular response to stimulus

 
218361_at -0.359 7.108 -2.544 2.227e-02 0.232 -3.450 GOLPH3L golgi phosphoprotein 3-like 1 -148885324 NM_018178 1q21.3 Hs.646007 4

cytoplasm

Golgi apparatus

membrane

 
228073_at 0.314 5.819 2.544 2.227e-02 0.232 -3.450 NANP N-acetylneuraminic acid phosphatase 20 -25541574 AI146450 20p11.1 Hs.143137 Hs.606268 7

magnesium ion binding

cellular_component

carbohydrate metabolic process

metabolic process

phosphoglycolate phosphatase activity

hydrolase activity

N-acetylneuraminate biosynthetic process

N-acylneuraminate-9-phosphatase activity

Amino sugar and nucleotide sugar metabolism

Metabolic pathways

227888_at 0.183 5.023 2.544 2.228e-02 0.232 -3.450 RRBP1 ribosome binding protein 1 homolog 180kDa (dog) 20 -17542322 AA534989 20p12 Hs.472213 19

receptor activity

endoplasmic reticulum

ribosome

translation

signal transduction

protein transport

membrane

integral to membrane

integral to endoplasmic reticulum membrane

intracellular protein transmembrane transport

 
202754_at -0.396 8.357 -2.544 2.230e-02 0.232 -3.451 R3HDM1 R3H domain containing 1 2 136005552 NM_015361 2q21.3 Hs.412462 8

nucleic acid binding

 
205376_at -0.838 4.882 -2.543 2.231e-02 0.232 -3.451 INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 4 -143168631 NM_003866 4q31.21 Hs.658245 9

signal transduction

phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity

hydrolase activity

phosphatidyl-inositol-4,5-bisphosphate 4-phosphatase activity

Inositol phosphate metabolism

Metabolic pathways

Phosphatidylinositol signaling system

202235_at -0.413 7.042 -2.543 2.231e-02 0.232 -3.451 SLC16A1 solute carrier family 16, member 1 (monocarboxylic acid transporter 1) 1 -113255992 BF511091 1p12 Hs.75231 43

protein binding

membrane fraction

plasma membrane

transport

mevalonate transmembrane transporter activity

symporter activity

secondary active monocarboxylate transmembrane transporter activity

organic anion transport

mevalonate transport

integral to membrane

 
203360_s_at -0.445 6.026 -2.543 2.231e-02 0.232 -3.451 MYCBP c-myc binding protein 1 -39101222 D50692 1p33-p32.2 Hs.591506 12

transcription coactivator activity

protein binding

nucleus

cytoplasm

mitochondrion

spermatogenesis

regulation of transcription

 
210290_at 0.247 4.178 2.543 2.232e-02 0.232 -3.451 ZNF174 zinc finger protein 174 16 3391190, 3391190 BC001161 16p13.3 Hs.155204 9

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

protein binding

intracellular

nucleus

nucleolus

cytoplasm

cytoskeleton

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
224638_at 0.203 5.462 2.543 2.232e-02 0.232 -3.452 UNQ1887 signal peptide peptidase 3 12 -119685417 AI338356 12q24.31 Hs.507087 Hs.683964 12

aspartic-type endopeptidase activity

peptidase activity

membrane

integral to membrane

 
227013_at -0.417 8.565 -2.543 2.233e-02 0.232 -3.452 LATS2 LATS, large tumor suppressor, homolog 2 (Drosophila) 13 -20445175 AI535735 13q11-q12 Hs.78960 17

G1/S transition of mitotic cell cycle

nucleotide binding

magnesium ion binding

spindle pole

protein serine/threonine kinase activity

ATP binding

nucleus

cytoplasm

centrosome

protein amino acid phosphorylation

cell cycle

mitosis

protein kinase cascade

hormone-mediated signaling

transferase activity

negative regulation of cyclin-dependent protein kinase activity

cell division

 
212371_at -0.316 8.017 -2.543 2.234e-02 0.232 -3.452 PPPDE1 PPPDE peptidase domain containing 1 1 242882974 AL049397 1q44 Hs.498317 5    
223990_at 0.284 6.135 2.543 2.234e-02 0.232 -3.452 C4orf17 chromosome 4 open reading frame 17 4 100651222 AL136838 4q23 Hs.97501 6    
214310_s_at 0.338 5.195 2.542 2.235e-02 0.232 -3.453 ZFPL1 zinc finger protein-like 1 11 64608269 AI767884 11q13 Hs.714995 Hs.98170 8

DNA binding

protein binding

nucleus

Golgi apparatus

zinc ion binding

membrane

integral to membrane

vesicle-mediated transport

regulation of transcription

metal ion binding

 
205054_at -0.183 13.427 -2.542 2.235e-02 0.232 -3.453 NEB nebulin 2 -152050098 NM_004543 2q22 Hs.588655 32

actin binding

protein binding

cytoplasm

somatic muscle development

structural constituent of muscle

actin cytoskeleton

sarcomere

Z disc

regulation of actin filament length

 
222569_at -0.468 6.279 -2.542 2.236e-02 0.232 -3.453 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 128565223, 128565251 AU153746 2q14.3 Hs.598715 Hs.719174 10

UDP-glucose:glycoprotein glucosyltransferase activity

endoplasmic reticulum

endoplasmic reticulum lumen

ER-Golgi intermediate compartment

protein amino acid glycosylation

transferase activity, transferring glycosyl groups

unfolded protein binding

'de novo' posttranslational protein folding

 
226598_s_at 0.242 6.908 2.542 2.236e-02 0.232 -3.453 GTPBP5 GTP binding protein 5 (putative) 20 60191475 AK001603 20q13.33 Hs.340636 6

nucleotide binding

GTP binding

intracellular

mitochondrion

ribosome biogenesis

 
209542_x_at 0.421 6.469 2.542 2.237e-02 0.232 -3.453 IGF1 insulin-like growth factor 1 (somatomedin C) 12 -101335583, -101313774, -101313774 M29644 12q22-q23 Hs.160562 714

skeletal system development

osteoblast differentiation

insulin receptor binding

insulin-like growth factor receptor binding

insulin-like growth factor receptor binding

hormone activity

hormone activity

protein binding

extracellular region

extracellular region

extracellular region

DNA replication

anti-apoptosis

cell motion

signal transduction

Ras protein signal transduction

nervous system development

muscle organ development

growth factor activity

positive regulation of cell proliferation

glycolate metabolic process

organ morphogenesis

glial cell differentiation

positive regulation of phosphoinositide 3-kinase cascade

satellite cell maintenance involved in skeletal muscle regeneration

muscle hypertrophy

myotube cell development

positive regulation of smooth muscle cell migration

insulin-like growth factor binding protein complex

positive regulation of granule cell precursor proliferation

water homeostasis

proteoglycan biosynthetic process

mammary gland development

platelet alpha granule lumen

regulation of steroid hormone receptor signaling pathway

negative regulation of smooth muscle cell apoptosis

regulation of multicellular organism growth

positive regulation of tyrosine phosphorylation of Stat5 protein

positive regulation of gene-specific transcription

positive regulation of insulin-like growth factor receptor signaling pathway

myoblast differentiation

positive regulation of DNA replication

positive regulation of DNA replication

positive regulation of glycolysis

positive regulation of mitosis

positive regulation of transcription from RNA polymerase II promoter

positive regulation of Ras protein signal transduction

phosphoinositide-mediated signaling

positive regulation of fibroblast proliferation

positive regulation of smooth muscle cell proliferation

branching morphogenesis of a tube

chondroitin sulfate proteoglycan biosynthetic process

positive regulation of epithelial cell proliferation

positive regulation of peptidyl-tyrosine phosphorylation

regulation of protein metabolic process

myoblast proliferation

p53 signaling pathway

mTOR signaling pathway

Focal adhesion

Long-term depression

Pathways in cancer

Glioma

Prostate cancer

Melanoma

Hypertrophic cardiomyopathy (HCM)

1566271_x_at -0.198 3.442 -2.542 2.237e-02 0.232 -3.453 GARNL1 GTPase activating Rap/RanGAP domain-like 1 14 -35077308 AF085938 14q13.2 Hs.113150 10

GTPase activator activity

intracellular

nucleus

cytoplasm

mitochondrion

regulation of small GTPase mediated signal transduction

 
224592_x_at -0.343 9.623 -2.541 2.240e-02 0.232 -3.455 HP1BP3 heterochromatin protein 1, binding protein 3 1 -20941757 BG483966 1p36.12 Hs.142442 3

nucleosome

DNA binding

nucleus

chromosome

nucleosome assembly

 
218228_s_at -0.456 7.872 -2.541 2.242e-02 0.232 -3.456 TNKS2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 10 93548130 NM_025235 10q23.3 Hs.329327 15

pericentriolar material

nuclear chromosome, telomeric region

NAD+ ADP-ribosyltransferase activity

nucleus

nuclear envelope

chromosome

cytoplasm

microsome

Golgi apparatus

protein amino acid ADP-ribosylation

membrane

transferase activity, transferring glycosyl groups

positive regulation of telomere maintenance via telomerase

regulation of multicellular organism growth

perinuclear region of cytoplasm

protein localization to telomere

 
223113_at 0.317 6.164 2.540 2.246e-02 0.233 -3.457 TMEM138 transmembrane protein 138 11 60886431 AF151030 11q12.2 Hs.406530 3

membrane

integral to membrane

 
235338_s_at -0.239 3.808 -2.540 2.246e-02 0.233 -3.457 SETDB2 SET domain, bifurcated 2 13 48916429, 48923688 W65369 13q14 Hs.631789 Hs.633823 6

DNA binding

nucleus

methyltransferase activity

zinc ion binding

chromatin modification

transferase activity

histone-lysine N-methyltransferase activity

Lysine degradation

210148_at -0.836 4.518 -2.540 2.246e-02 0.233 -3.457 HIPK3 homeodomain interacting protein kinase 3 11 33235743 AF305239 11p13 Hs.201918 14

nucleotide binding

protein serine/threonine kinase activity

ATP binding

nucleus

cytoplasm

apoptosis

anti-apoptosis

transferase activity

peptidyl-serine phosphorylation

peptidyl-threonine phosphorylation

negative regulation of JUN kinase activity

regulation of transcription

 
241150_at 0.319 4.800 2.540 2.247e-02 0.233 -3.457 SPTAN1 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) 9 130354686 AI668588 9q33-q34 Hs.372331 70

actin binding

structural constituent of cytoskeleton

calcium ion binding

calmodulin binding

membrane fraction

cytoplasm

cytosol

cytoskeleton

cell cortex

spectrin

actin filament capping

Tight junction

236655_at -0.417 4.874 -2.539 2.249e-02 0.233 -3.458 TPD52 tumor protein D52 8 -81109659, -81109659 AI632972 8q21 Hs.368433 27

calcium ion binding

cytoplasm

endoplasmic reticulum

anatomical structure morphogenesis

B cell differentiation

protein homodimerization activity

secretion

protein heterodimerization activity

perinuclear region of cytoplasm

 
210661_at -0.329 2.351 -2.539 2.249e-02 0.233 -3.458 GLRA3 glycine receptor, alpha 3 4 -175799772 U93917 4q33-q34 Hs.413099 8

ion channel activity

extracellular ligand-gated ion channel activity

plasma membrane

ion transport

chloride transport

synaptic transmission

integral to membrane

extracellular-glycine-gated chloride channel activity

cell junction

neurotransmitter receptor activity

chloride ion binding

chloride channel complex

synapse

postsynaptic membrane

Neuroactive ligand-receptor interaction

209546_s_at 0.256 6.253 2.539 2.249e-02 0.233 -3.459 APOL1 apolipoprotein L, 1 22 34979062 AF323540 22q13.1 Hs.114309 27

chloride channel activity

protein binding

extracellular region

extracellular space

lipid metabolic process

chloride transport

lipid transport

steroid metabolic process

cholesterol metabolic process

lipid binding

cytolysis

intrinsic to membrane

killing of cells of another organism

very-low-density lipoprotein particle

high-density lipoprotein particle

lipoprotein metabolic process

innate immune response

 
200897_s_at -0.484 10.525 -2.539 2.249e-02 0.233 -3.459 PALLD palladin, cytoskeletal associated protein 4 169654791 NM_016081 4q32.3 Hs.151220 40

actin binding

protein binding

nucleus

cytoplasm

cytoskeleton

actin filament

cytoskeleton organization

muscle alpha-actinin binding

 
209653_at -0.519 5.423 -2.539 2.249e-02 0.233 -3.459 KPNA4 karyopherin alpha 4 (importin alpha 3) 3 -161700655 U93240 3q25.33 Hs.715552 53

protein binding

nucleus

nuclear pore

cytoplasm

NLS-bearing substrate import into nucleus

intracellular protein transport

protein transporter activity

 
202677_at 0.304 8.348 2.539 2.250e-02 0.233 -3.459 RASA1 RAS p21 protein activator (GTPase activating protein) 1 5 86599906, 86600521 NM_002890 5q13.3 Hs.664080 126

cytokinesis

vasculogenesis

ruffle

glycoprotein binding

negative regulation of cell-matrix adhesion

Ras GTPase activator activity

receptor binding

intracellular

cytoplasm

plasma membrane

negative regulation of cell adhesion

intracellular signaling cascade

regulation of cell shape

embryonic development

potassium channel inhibitor activity

regulation of actin filament polymerization

negative regulation of neuron apoptosis

positive regulation of anti-apoptosis

GTPase binding

regulation of small GTPase mediated signal transduction

regulation of RNA metabolic process

MAPK signaling pathway

Axon guidance

226015_at 0.227 6.752 2.539 2.250e-02 0.233 -3.459 ZNF12 zinc finger protein 12 7 -6694588 AI865669 7p22.1 Hs.431471 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
222957_at 0.198 6.719 2.539 2.250e-02 0.233 -3.459 NEU4 sialidase 4 2 242400745 AK025617 2q37.3 Hs.551747 12

exo-alpha-sialidase activity

protein binding

metabolic process

membrane

hydrolase activity, acting on glycosyl bonds

organelle inner membrane

lysosomal lumen

Other glycan degradation

Sphingolipid metabolism

223047_at 0.348 5.386 2.539 2.252e-02 0.233 -3.459 CMTM6 CKLF-like MARVEL transmembrane domain containing 6 3 -32497807 AF116694 3p22.3 Hs.380627 Hs.440494 4

cytokine activity

extracellular space

chemotaxis

membrane

integral to membrane

 
205514_at 0.690 4.998 2.539 2.252e-02 0.233 -3.460 ZNF415 zinc finger protein 415 19 -58303165, -58302943 NM_018355 19q13.42 Hs.147765 6

DNA binding

intracellular

nucleus

cytoplasm

zinc ion binding

regulation of transcription

metal ion binding

 
205781_at 0.248 6.378 2.538 2.253e-02 0.233 -3.460 C16orf7 chromosome 16 open reading frame 7 16 -88301041 NM_004913 16q24 Hs.164410 3

transporter activity

ATP synthesis coupled proton transport

 
209267_s_at 0.516 3.885 2.538 2.254e-02 0.233 -3.460 SLC39A8 solute carrier family 39 (zinc transporter), member 8 4 -103401843, -103401843, -103401843, -103391220 AB040120 4q22-q24 Hs.288034 9

ion transport

zinc ion transport

zinc ion binding

membrane

integral to membrane

metal ion transport

metal ion transmembrane transporter activity

 
1565603_at 0.198 6.093 2.538 2.255e-02 0.233 -3.461 PWP2 PWP2 periodic tryptophan protein homolog (yeast) 21 44351635 BE218871 21q22.3 Hs.449076 11

serine-type endopeptidase activity

signal transducer activity

nucleus

nucleolus

proteolysis

signal transduction

 
206267_s_at 0.231 6.221 2.538 2.257e-02 0.233 -3.461 MATK megakaryocyte-associated tyrosine kinase 19 -3728966, -3728966 NM_002378 19p13.3 Hs.631845 36

nucleotide binding

non-membrane spanning protein tyrosine kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

signal transduction

mesoderm development

positive regulation of cell proliferation

transferase activity

 
203457_at -0.267 5.895 -2.538 2.257e-02 0.233 -3.462 STX7 syntaxin 7 6 -132820355 NM_003569 6q23.1 Hs.593148 Hs.605992 31

SNAP receptor activity

endosome

Golgi apparatus

intracellular protein transport

post-Golgi vesicle-mediated transport

membrane

integral to membrane

vesicle-mediated transport

SNARE interactions in vesicular transport

212818_s_at 0.244 7.377 2.537 2.258e-02 0.233 -3.462 ASB1 ankyrin repeat and SOCS box-containing 1 2 239000364 AF055024 2q37 Hs.516788 9

molecular_function

intracellular

intracellular signaling cascade

multicellular organismal development

modification-dependent protein catabolic process

negative regulation of cytokine biosynthetic process

 
201493_s_at -0.463 6.999 -2.537 2.259e-02 0.233 -3.462 PUM2 pumilio homolog 2 (Drosophila) 2 -20311933 BE778078 2p22-p21 Hs.467824 18

RNA binding

protein binding

cytoplasm

regulation of translation

 
1557362_at -0.233 5.273 -2.537 2.260e-02 0.233 -3.463 PHIP pleckstrin homology domain interacting protein 6 -79700855 AI969112 6q14 Hs.511817 Hs.606356 7

insulin receptor binding

protein binding

cellular_component

insulin receptor signaling pathway

 
1562153_a_at -0.265 4.461 -2.537 2.260e-02 0.233 -3.463 PVT1 Pvt1 oncogene (non-protein coding) 8 128875960 BM821521 8q24 Hs.133107 Hs.675281 12    
224642_at -0.695 7.117 -2.537 2.260e-02 0.233 -3.463 FYTTD1 forty-two-three domain containing 1 3 198960820, 198961020, 198961657 BG291550 3q29 Hs.277533 6    
211874_s_at -0.240 5.368 -2.537 2.261e-02 0.233 -3.463 MYST4 MYST histone acetyltransferase (monocytic leukemia) 4 10 76256384 AF119230 10q22.2 Hs.35758 Hs.599543 15

histone acetyltransferase complex

nucleosome

DNA binding

H3/H4 histone acetyltransferase activity

nucleus

nucleosome assembly

regulation of transcription, DNA-dependent

transcription factor binding

zinc ion binding

acetyltransferase activity

negative regulation of transcription

transcription activator activity

transcription repressor activity

chromatin modification

transferase activity

histone H3 acetylation

positive regulation of transcription

metal ion binding

 
214034_at -0.466 4.271 -2.537 2.261e-02 0.233 -3.463 ERAP1 endoplasmic reticulum aminopeptidase 1 5 -96135943, -96122269 AB011097 5q15 Hs.716426 40

aminopeptidase activity

interleukin-6 receptor binding

interleukin-1, Type II receptor binding

protein binding

extracellular region

cytoplasm

endoplasmic reticulum

endoplasmic reticulum lumen

cytosol

proteolysis

membrane protein ectodomain proteolysis

immune response

regulation of blood pressure

peptidase activity

metalloexopeptidase activity

zinc ion binding

response to bacterium

membrane

integral to membrane

antigen processing and presentation of endogenous peptide antigen via MHC class I

regulation of innate immune response

fat cell differentiation

positive regulation of angiogenesis

metal ion binding

 
217398_x_at -0.185 13.779 -2.537 2.262e-02 0.233 -3.463 GAPDH glyceraldehyde-3-phosphate dehydrogenase 12 6513917 AK026525 12p13 Hs.544577 Hs.592355 Hs.598320 130

glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity

protein binding

cytoplasm

glucose metabolic process

glycolysis

membrane

oxidoreductase activity

perinuclear region of cytoplasm

NAD or NADH binding

oxidation reduction

Glycolysis / Gluconeogenesis

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

Alzheimer's disease

224573_at 0.250 10.494 2.537 2.262e-02 0.233 -3.463 RNASEK ribonuclease, RNase K 17 6856521 BE744389 17p13.1 Hs.632232 3

endoribonuclease activity

cellular_component

rRNA transcription

membrane

integral to membrane

hydrolase activity

 
220335_x_at -0.381 7.966 -2.536 2.263e-02 0.233 -3.464 CES3 carboxylesterase 3 16 65552638 NM_024922 16q22.1 Hs.268700 9

carboxylesterase activity

endoplasmic reticulum

endoplasmic reticulum lumen

hydrolase activity

 
212462_at -0.444 8.110 -2.536 2.263e-02 0.233 -3.464 MYST4 MYST histone acetyltransferase (monocytic leukemia) 4 10 76256384 AU144267 10q22.2 Hs.35758 Hs.599543 15

histone acetyltransferase complex

nucleosome

DNA binding

H3/H4 histone acetyltransferase activity

nucleus

nucleosome assembly

regulation of transcription, DNA-dependent

transcription factor binding

zinc ion binding

acetyltransferase activity

negative regulation of transcription

transcription activator activity

transcription repressor activity

chromatin modification

transferase activity

histone H3 acetylation

positive regulation of transcription

metal ion binding

 
203197_s_at 0.324 8.562 2.536 2.263e-02 0.233 -3.464 C1orf123 chromosome 1 open reading frame 123 1 -53452359 AW157077 1p32.3 Hs.525391 4

molecular_function

cellular_component

biological_process

 
225159_s_at -0.434 7.796 -2.536 2.264e-02 0.233 -3.464 MED28 mediator complex subunit 28 4 17225370 AW614072 4p16 Hs.434075 Hs.644788 14

actin binding

protein binding

nucleus

cytoplasm

membrane

regulation of transcription

 
202655_at 0.372 6.927 2.536 2.264e-02 0.233 -3.464 MANF mesencephalic astrocyte-derived neurotrophic factor 3 51397742 NM_006010 3p21.1 Hs.436446 12

molecular_function

extracellular region

growth factor activity

biological_process

 
228604_at -0.474 5.460 -2.536 2.265e-02 0.233 -3.465 FAM76A family with sequence similarity 76, member A 1 27925076 AI805069 1p35.3 Hs.469359 4    
208625_s_at -0.311 8.464 -2.536 2.265e-02 0.233 -3.465 EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 3 185515049, 185515664, 185520956 AF104913 3q27-qter Hs.433750 91

RNA binding

translation initiation factor activity

protein binding

cytoplasm

cytosol

regulation of translational initiation

RNA metabolic process

eukaryotic translation initiation factor 4F complex

interspecies interaction between organisms

 
224565_at -0.512 10.792 -2.535 2.267e-02 0.233 -3.465 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 11 64946844, 64946844 BE675516 11q13.1 Hs.523789 Hs.648467 6    
239012_at -0.676 7.441 -2.535 2.267e-02 0.233 -3.465 RNF144B ring finger protein 144B 6 18495572 R83905 6p22.3 Hs.148741 6

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

apoptosis

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

protein ubiquitination during ubiquitin-dependent protein catabolic process

metal ion binding

 
243818_at 0.226 4.130 2.535 2.268e-02 0.233 -3.466 SFTA1P surfactant associated 1 (pseudogene) 10 -10866407 T96555 10p14 Hs.31562      
217930_s_at 0.278 7.280 2.535 2.268e-02 0.233 -3.466 TOLLIP toll interacting protein 11 -1252176 NM_019009 11p15.5 Hs.368527 24

signal transducer activity

Toll binding

protein binding

cytoplasm

inflammatory response

immune response

intracellular signaling cascade

cell-cell signaling

phosphorylation

interleukin-18 receptor complex

leukocyte activation

interleukin-1 receptor complex

Toll-like receptor signaling pathway

210165_at -0.241 5.083 -2.535 2.269e-02 0.233 -3.466 DNASE1 deoxyribonuclease I 16 3642940 M55983 16p13.3 Hs.629638 48

actin binding

endonuclease activity

deoxyribonuclease I activity

deoxyribonuclease activity

calcium ion binding

protein binding

extracellular region

nucleus

nuclear envelope

DNA catabolic process

apoptosis

hydrolase activity

 
211890_x_at -0.487 9.553 -2.535 2.269e-02 0.233 -3.466 CAPN3 calpain 3, (p94) 15 40427592, 40438989, 40481879, 40484268 AF127765 15q15.1-q21.1 Hs.143261 66

calcium-dependent cysteine-type endopeptidase activity

signal transducer activity

calcium ion binding

intracellular

cytoplasm

proteolysis

muscle organ development

peptidase activity

 
236324_at 0.246 4.540 2.535 2.270e-02 0.233 -3.467 MBP myelin basic protein 18 -72853726, -72819776, -72819776 BE676488 18q23 Hs.551713 102

plasma membrane

immune response

synaptic transmission

central nervous system development

structural constituent of myelin sheath

internode region of axon

myelination

cell projection

cell soma

myelin sheath

 
212604_at 0.291 8.286 2.535 2.270e-02 0.233 -3.467 MRPS31 mitochondrial ribosomal protein S31 13 -40201431 AI937794 13q14.11 Hs.154655 8

mitochondrion

ribosome

protein domain specific binding

 
200925_at 0.414 8.048 2.535 2.270e-02 0.233 -3.467 COX6A1 cytochrome c oxidase subunit VIa polypeptide 1 12 119360286 NM_004373 12q24.2 Hs.497118 11

cytochrome-c oxidase activity

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex IV

generation of precursor metabolites and energy

membrane

Oxidative phosphorylation

Metabolic pathways

Cardiac muscle contraction

Alzheimer's disease

Parkinson's disease

Huntington's disease

206387_at 0.282 4.762 2.535 2.270e-02 0.233 -3.467 CDX2 caudal type homeobox 2 13 -27434277 U51096 13q12.3 Hs.174249 103

negative regulation of transcription from RNA polymerase II promoter

condensed nuclear chromosome

blood vessel development

blastocyst development

trophectodermal cell differentiation

placenta development

transcription factor activity

transcription corepressor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

pattern specification process

organ morphogenesis

transcriptional repressor complex

somatic stem cell maintenance

sequence-specific DNA binding

positive regulation of cell differentiation

 
214242_at 0.215 4.748 2.535 2.270e-02 0.233 -3.467 MAN1A2 mannosidase, alpha, class 1A, member 2 1 117711607 AI189305 1p13 Hs.435938 25

mannosyl-oligosaccharide 1,2-alpha-mannosidase activity

calcium ion binding

membrane fraction

Golgi apparatus

N-glycan processing

metabolic process

membrane

integral to membrane

hydrolase activity, acting on glycosyl bonds

N-Glycan biosynthesis

Metabolic pathways

202311_s_at 0.630 3.907 2.534 2.272e-02 0.233 -3.468 COL1A1 collagen, type I, alpha 1 17 -45616455 AI743621 17q21.33 Hs.172928 Hs.681002 360

ossification

blood vessel development

extracellular matrix structural constituent

extracellular region

extracellular region

collagen

collagen type I

plasma membrane

response to nutrient

visual perception

sensory perception of sound

response to mechanical stimulus

response to inorganic substance

collagen fibril organization

response to corticosteroid stimulus

collagen biosynthetic process

tooth mineralization

response to hydrogen peroxide

identical protein binding

response to peptide hormone stimulus

skin morphogenesis

platelet-derived growth factor binding

embryonic skeletal system development

response to cAMP

Focal adhesion

ECM-receptor interaction

208463_at 0.293 4.592 2.534 2.274e-02 0.233 -3.468 GABRA4 gamma-aminobutyric acid (GABA) A receptor, alpha 4 4 -46615673 NM_000809 4p12 Hs.248112 17

GABA-A receptor activity

ion channel activity

extracellular ligand-gated ion channel activity

chloride channel activity

plasma membrane

integral to plasma membrane

ion transport

chloride transport

gamma-aminobutyric acid signaling pathway

benzodiazepine receptor activity

cell junction

chloride ion binding

chloride channel complex

synapse

postsynaptic membrane

Neuroactive ligand-receptor interaction

226533_at -0.426 6.519 -2.533 2.277e-02 0.234 -3.470 HINT3 histidine triad nucleotide binding protein 3 6 126319553 BF694956 6q22.32 Hs.72325 6

nucleus

cytoplasm

hydrolase activity

 
225260_s_at 0.220 9.244 2.533 2.277e-02 0.234 -3.470 MRPL32 mitochondrial ribosomal protein L32 7 42938463 AL551823 7p14 Hs.50252 11

structural constituent of ribosome

mitochondrion

mitochondrial inner membrane

mitochondrial ribosome

ribosome

translation

translation regulator activity

 
230992_at 0.473 5.744 2.533 2.278e-02 0.234 -3.470 BTNL9 butyrophilin-like 9 5 180399830 T47960 5q35.3 Hs.546502 4

membrane

integral to membrane

 
218343_s_at -0.365 6.702 -2.533 2.278e-02 0.234 -3.470 GTF3C3 general transcription factor IIIC, polypeptide 3, 102kDa 2 -197337344 NM_012086 2q33.1 Hs.470996 10

transcription factor TFIIIC complex

DNA binding

RNA polymerase III transcription factor activity

binding

nucleus

transcription, DNA-dependent

5S class rRNA transcription

tRNA transcription from RNA polymerase III promoter

 
200902_at -0.307 8.296 -2.533 2.279e-02 0.234 -3.470 SEP15 15 kDa selenoprotein 1 -87100715 NM_004261 1p31 Hs.362728 16

protein binding

endoplasmic reticulum

endoplasmic reticulum lumen

selenium binding

'de novo' posttranslational protein folding

 
205978_at 0.289 3.368 2.532 2.280e-02 0.234 -3.471 KL klotho 13 32488570 NM_004795 13q12 Hs.524953 62

beta-glucuronidase activity

signal transducer activity

hormone activity

vitamin D binding

protein binding

extracellular region

extracellular region

extracellular space

membrane fraction

soluble fraction

plasma membrane

plasma membrane

integral to plasma membrane

carbohydrate metabolic process

energy reserve metabolic process

aging

metabolic process

beta-glucosidase activity

fibroblast growth factor receptor signaling pathway

positive regulation of bone mineralization

cation binding

 
218705_s_at -0.365 6.635 -2.532 2.281e-02 0.234 -3.471 SNX24 sorting nexin 24 5 122209058 NM_014035 5q23.2 Hs.483200 5

protein binding

cell communication

protein transport

phosphoinositide binding

 
228224_at 0.257 5.690 2.532 2.283e-02 0.234 -3.472 PRELP proline/arginine-rich end leucine-rich repeat protein 1 201711505 AA573140 1q32 Hs.632481 13

skeletal system development

extracellular matrix structural constituent

protein binding

extracellular region

proteinaceous extracellular matrix

cell aging

 
234257_at 0.291 4.401 2.532 2.284e-02 0.234 -3.472 TNS3 tensin 3 7 -47281276 AL137468 7p12.3 Hs.520814 12

protein binding

nucleus

nucleolus

cytoplasm

plasma membrane

focal adhesion

positive regulation of cell proliferation

cell migration

cell junction

lung alveolus development

 
230200_at 0.273 6.540 2.532 2.284e-02 0.234 -3.472 NSUN6 NOL1/NOP2/Sun domain family, member 6 10 -18874269 BF433689 10p12.31 Hs.396175 4

RNA binding

methyltransferase activity

transferase activity

 
203726_s_at 0.341 4.918 2.531 2.285e-02 0.234 -3.473 LAMA3 laminin, alpha 3 18 19523559, 19706981 NM_000227 18q11.2 Hs.436367 49

receptor binding

structural molecule activity

extracellular region

basement membrane

laminin-1 complex

epidermis development

regulation of cell adhesion

regulation of cell migration

regulation of embryonic development

Focal adhesion

ECM-receptor interaction

Pathways in cancer

Small cell lung cancer

208563_x_at 0.256 4.175 2.531 2.287e-02 0.234 -3.473 POU3F3 POU class 3 homeobox 3 2 104838400 NM_006236 2q12.1 Hs.673855 6

kidney development

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

central nervous system development

cerebral cortex radially oriented cell migration

forebrain ventricular zone progenitor cell division

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

 
224484_s_at -0.412 4.733 -2.530 2.289e-02 0.234 -3.474 BRMS1L breast cancer metastasis-suppressor 1-like 14 35365347 BC006250 14q13.2 Hs.525299 3

nucleus

regulation of growth

regulation of transcription

 
223424_s_at -0.277 6.552 -2.530 2.290e-02 0.234 -3.475 ZSCAN21 zinc finger and SCAN domain containing 21 7 99485352 AL136865 7q22.1 Hs.632294 9

transcription factor activity

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

transcription activator activity

metal ion binding

 
218177_at -0.410 5.945 -2.529 2.295e-02 0.235 -3.476 CHMP1B chromatin modifying protein 1B 18 11841388 AA293502 18p11.21 Hs.656244 16

cytoplasm

endosome

cytosol

cell cycle

protein transport

membrane

protein domain specific binding

cell division

Endocytosis

230266_at 0.447 5.235 2.529 2.295e-02 0.235 -3.477 RAB7B RAB7B, member RAS oncogene family 1   AI127991 1q32 Hs.534612 4

nucleotide binding

GTP binding

lysosome

small GTPase mediated signal transduction

protein transport

 
220579_at -0.257 4.036 -2.529 2.295e-02 0.235 -3.477 FLJ14100 hypothetical protein FLJ14100 1   NM_025025 1p36.33 Hs.711221 1    
1561232_at 0.194 2.953 2.529 2.297e-02 0.235 -3.477 LOC100270680 hypothetical LOC100270680 8   BC042052 8q24 Hs.333720 1    
207962_at 0.252 4.376 2.528 2.299e-02 0.235 -3.478 CAPN11 calpain 11 6 44234525 NM_007058 6p12 Hs.225953 8

acrosomal vesicle

calcium-dependent cysteine-type endopeptidase activity

calcium ion binding

intracellular

proteolysis

peptidase activity

 
218178_s_at -0.428 8.778 -2.528 2.299e-02 0.235 -3.478 CHMP1B chromatin modifying protein 1B 18 11841388 NM_020412 18p11.21 Hs.656244 16

cytoplasm

endosome

cytosol

cell cycle

protein transport

membrane

protein domain specific binding

cell division

Endocytosis

228697_at -0.390 9.162 -2.528 2.300e-02 0.235 -3.478 HINT3 histidine triad nucleotide binding protein 3 6 126319553 AW731710 6q22.32 Hs.72325 6

nucleus

cytoplasm

hydrolase activity

 
53720_at 0.299 6.198 2.528 2.300e-02 0.235 -3.478 C19orf66 chromosome 19 open reading frame 66 19 10057805 AI862559 19p13.2 Hs.655613 2    
230529_at 0.236 4.471 2.527 2.303e-02 0.235 -3.480 HECA headcase homolog (Drosophila) 6 139497941 BE676408 6q23-q24 Hs.197644 6

molecular_function

cellular_component

multicellular organismal development

respiratory tube development

 
235551_at -0.223 3.803 -2.527 2.304e-02 0.235 -3.480 WDR4 WD repeat domain 4 21 -43142404, -43136272 AA555280 21q22.3 Hs.248815 10

protein binding

nucleus

nucleoplasm

cytoplasm

tRNA modification

tRNA (guanine-N7-)-methyltransferase activity

 
202169_s_at -0.345 9.072 -2.527 2.304e-02 0.235 -3.480 AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase 11 105453501 AF302110 11q22 Hs.524009 9

magnesium ion binding

protein binding

cytoplasm

cytosol

holo-[acyl-carrier-protein] synthase activity

holo-[acyl-carrier-protein] synthase activity

macromolecule biosynthetic process

transferase activity

Lysine biosynthesis

Lysine degradation

Metabolic pathways

209602_s_at 0.452 2.718 2.527 2.304e-02 0.235 -3.480 GATA3 GATA binding protein 3 10 8136672 AI796169 10p15 Hs.524134 92

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

defense response

transcription factor binding

zinc ion binding

anatomical structure morphogenesis

sequence-specific DNA binding

response to estrogen stimulus

metal ion binding

 
229310_at -0.633 5.992 -2.527 2.305e-02 0.235 -3.480 KLHL29 kelch-like 29 (Drosophila) 2   BE465475 2p24.1 Hs.130593 5

protein binding

 
200989_at 0.360 7.856 2.527 2.305e-02 0.235 -3.480 HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 14 61231871 NM_001530 14q21-q24 Hs.597216 743

response to hypoxia

neural crest cell migration

epithelial to mesenchymal transition

embryonic placenta development

positive regulation of endothelial cell proliferation

heart looping

connective tissue replacement during inflammatory response

RNA polymerase II transcription factor activity, enhancer binding

signal transducer activity

nucleus

transcription factor complex

nucleolus

cytoplasm

lactate metabolic process

regulation of transcription, DNA-dependent

cellular iron ion homeostasis

signal transduction

transcription factor binding

microtubule-based flagellum

positive regulation vascular endothelial growth factor production

positive regulation of epithelial cell migration

response to muscle activity

cell differentiation

positive regulation of vascular endothelial growth factor receptor signaling pathway

oxygen homeostasis

positive regulation of chemokine production

regulation of transforming growth factor-beta2 production

collagen metabolic process

histone acetyltransferase binding

embryonic hemopoiesis

hemoglobin biosynthetic process

glucose homeostasis

mRNA transcription from RNA polymerase II promoter

regulation of apoptosis

positive regulation of gene-specific transcription

sequence-specific DNA binding

regulation of transcription from RNA polymerase II promoter in response to oxidative stress

positive regulation of erythrocyte differentiation

positive regulation of angiogenesis

positive regulation of glycolysis

negative regulation of growth

positive regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

muscle maintenance

positive regulation of hormone biosynthetic process

protein heterodimerization activity

protein heterodimerization activity

regulation of catalytic activity

positive regulation of nitric-oxide synthase activity

cartilage development

elastin metabolic process

Hsp90 protein binding

mTOR signaling pathway

Pathways in cancer

Renal cell carcinoma

211813_x_at 0.537 10.438 2.527 2.306e-02 0.235 -3.481 DCN decorin 12 -90063165, -90063165, -90063165 AF138303 12q21.33 Hs.718429 104

protein binding

glycosaminoglycan binding

extracellular region

proteinaceous extracellular matrix

organ morphogenesis

peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan

extracellular matrix binding

TGF-beta signaling pathway

227357_at -0.350 7.546 -2.526 2.308e-02 0.235 -3.482 MAP3K7IP3 mitogen-activated protein kinase kinase kinase 7 interacting protein 3 X -30755479 BF593914 Xp21.2 Hs.188256 10

protein binding

intracellular

zinc ion binding

metal ion binding

 
238648_at 0.233 4.713 2.526 2.310e-02 0.235 -3.482 FLJ42291 hypothetical LOC346547 7   BE671597 7q36.2        
218539_at -0.347 8.323 -2.526 2.311e-02 0.235 -3.483 FBXO34 F-box protein 34 14 54807773, 54808624 NM_017943 14q22.3 Hs.525348 Hs.654725 9

protein transport

modification-dependent protein catabolic process

 
201487_at -0.745 6.643 -2.526 2.311e-02 0.235 -3.483 CTSC cathepsin C 11 -87693628, -87666407 NM_001814 11q14.1-q14.3 Hs.128065 Hs.706874 51

cysteine-type endopeptidase activity

lysosome

proteolysis

immune response

peptidase activity

chloride ion binding

Lysosome

210587_at 1.249 4.259 2.526 2.312e-02 0.235 -3.483 INHBE inhibin, beta E 12 56135362 BC005161 12q13.3 Hs.632713 7

hormone activity

extracellular region

growth factor activity

Cytokine-cytokine receptor interaction

TGF-beta signaling pathway

217884_at -0.241 6.230 -2.525 2.312e-02 0.235 -3.483 NAT10 N-acetyltransferase 10 (GCN5-related) 11 34083686 NM_024662 11p13 Hs.577281 18

nucleotide binding

molecular_function

protein binding

ATP binding

nucleus

nucleolus

N-acetyltransferase activity

metabolic process

acyltransferase activity

transferase activity

 
238912_x_at -0.332 7.568 -2.525 2.312e-02 0.235 -3.483 C9orf85 chromosome 9 open reading frame 85 9 73716242 AA824363 9q21.13 Hs.534190 4    
242513_x_at -0.249 2.212 -2.525 2.313e-02 0.235 -3.483 KIAA2018 KIAA2018 3 -114849922 R49243 3q13.2 Hs.632570 1

DNA binding

mannosyl-oligosaccharide 1,2-alpha-mannosidase activity

calcium ion binding

nucleus

membrane

transcription regulator activity

regulation of transcription

 
222513_s_at -0.509 9.170 -2.525 2.313e-02 0.235 -3.483 SORBS1 sorbin and SH3 domain containing 1 10 -97061519, -97061519 N21458 10q23.3-q24.1 Hs.719081 35

stress fiber

actin binding

SH3/SH2 adaptor activity

SH3/SH2 adaptor activity

insulin receptor binding

nucleus

cytoplasm

cytosol

cytoskeleton

plasma membrane

insulin receptor complex

zonula adherens

cell-substrate adherens junction

transport

insulin receptor signaling pathway

glucose transport

cell junction

stress fiber formation

membrane raft

positive regulation of glycogen biosynthetic process

positive regulation of glucose import

positive regulation of lipid biosynthetic process

focal adhesion formation

PPAR signaling pathway

Adherens junction

Insulin signaling pathway

225498_at -0.343 10.146 -2.525 2.313e-02 0.235 -3.484 CHMP4B chromatin modifying protein 4B 20 31862779 AV713673 20q11.22 Hs.472471 19

cytoplasm

endosome

cytosol

protein transport

membrane

Endocytosis

221641_s_at -0.358 7.343 -2.525 2.314e-02 0.235 -3.484 ACOT9 acyl-CoA thioesterase 9 X -23631697 AF241787 Xp22.11 Hs.298885 6

acetyl-CoA hydrolase activity

carboxylesterase activity

mitochondrion

acyl-CoA metabolic process

hydrolase activity

 
209985_s_at 0.276 5.694 2.525 2.314e-02 0.235 -3.484 ASCL1 achaete-scute complex homolog 1 (Drosophila) 12 101875581 BE797438 12q23.2 Hs.704281 40

neuron migration

transcription factor activity

protein binding

nucleus

pattern specification process

nervous system development

neuroblast fate determination

neuroblast proliferation

oligodendrocyte development

spinal cord association neuron differentiation

spinal cord oligodendrocyte cell fate specification

oligodendrocyte cell fate commitment

central nervous system neuron development

cerebral cortex development

cell soma

sequence-specific DNA binding

regulation of transcription

positive regulation of Notch signaling pathway

positive regulation of transcription from RNA polymerase II promoter

subpallium neuron fate commitment

regulation of timing of subpallium neuron differentiation

olfactory pit development

 
204957_at -0.373 6.275 -2.525 2.314e-02 0.235 -3.484 ORC5L origin recognition complex, subunit 5-like (yeast) 7 -103595859, -103554023 NM_002553 7q22.1 Hs.432948 28

nucleotide binding

DNA replication origin binding

ATP binding

nucleus

nucleoplasm

DNA replication

DNA replication

DNA replication initiation

identical protein binding

Cell cycle

204868_at 0.270 8.521 2.525 2.315e-02 0.235 -3.484 ICT1 immature colon carcinoma transcript 1 17 70520374 NM_001545 17q25.1 Hs.407955 6

molecular_function

translation release factor activity

cellular_component

translational termination

biological_process

 
210080_x_at 0.236 4.463 2.525 2.315e-02 0.235 -3.484 CELA3A chymotrypsin-like elastase family, member 3A 1 22200735 D00306 1p36.12 Hs.654349 7

serine-type endopeptidase activity

proteolysis

digestion

cholesterol metabolic process

peptidase activity

 
242761_s_at 0.459 6.379 2.525 2.316e-02 0.235 -3.485 ZNF420 zinc finger protein 420 19 42261221 AI061288 19q13.12 Hs.444992 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
222562_s_at -0.791 5.576 -2.524 2.318e-02 0.235 -3.485 TNKS2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 10 93548130 BF060683 10q23.3 Hs.329327 15

pericentriolar material

nuclear chromosome, telomeric region

NAD+ ADP-ribosyltransferase activity

nucleus

nuclear envelope

chromosome

cytoplasm

microsome

Golgi apparatus

protein amino acid ADP-ribosylation

membrane

transferase activity, transferring glycosyl groups

positive regulation of telomere maintenance via telomerase

regulation of multicellular organism growth

perinuclear region of cytoplasm

protein localization to telomere

 
213644_at -0.386 6.059 -2.524 2.318e-02 0.235 -3.486 CCDC46 coiled-coil domain containing 46 17 -61062119, -61062119 AI979276 17q24.1 Hs.408676 4    
244527_at 0.231 3.058 2.524 2.319e-02 0.235 -3.486 TRIO triple functional domain (PTPRF interacting) 5 14196828 BG055304 5p15.2 Hs.130031 22

nucleotide binding

protein serine/threonine kinase activity

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

ATP binding

intracellular

cytoplasm

protein amino acid phosphorylation

transmembrane receptor protein tyrosine phosphatase signaling pathway

transferase activity

regulation of Rho protein signal transduction

 
242304_at 0.242 7.681 2.524 2.319e-02 0.235 -3.486 WIBG within bgcn homolog (Drosophila) 12 -54581463, -54581463 AI377416 12q13.2 Hs.505687 Hs.711082 6

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

RNA binding

protein binding

nucleus

nucleoplasm

nucleolus

cytoplasm

exon-exon junction complex

ribosome binding

positive regulation of translation

 
210995_s_at -0.445 4.580 -2.524 2.319e-02 0.235 -3.486 TRIM23 tripartite motif-containing 23 5 -64921262 AF230399 5q12.3 Hs.792 14

Golgi membrane

nucleotide binding

GTPase activity

ubiquitin-protein ligase activity

protein binding

GTP binding

intracellular

nucleus

cytoplasm

lysosomal membrane

Golgi apparatus

small GTPase mediated signal transduction

enzyme activator activity

zinc ion binding

membrane

protein ubiquitination

GDP binding

metal ion binding

 
230093_at 0.225 3.829 2.524 2.320e-02 0.235 -3.486 RSPH1 radial spoke head 1 homolog (Chlamydomonas) 21 -42765665 AI683428 21q22.3 Hs.661069 7

nucleus

cytoplasm

cytosol

meiosis

 
35179_at 0.202 5.215 2.524 2.320e-02 0.235 -3.486 B3GAT3 beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) 11 -62139343 AB009598 11q12.3 Hs.502759 13

Golgi membrane

Golgi apparatus

glycosaminoglycan biosynthetic process

galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity

membrane

integral to membrane

transferase activity

manganese ion binding

metal ion binding

Chondroitin sulfate biosynthesis

Heparan sulfate biosynthesis

Metabolic pathways

224847_at 0.284 5.832 2.524 2.320e-02 0.235 -3.486 CDK6 cyclin-dependent kinase 6 7 -92072172, -92072172 AW051349 7q21-q22 Hs.119882 95

G1 phase of mitotic cell cycle

nucleotide binding

cyclin-dependent protein kinase holoenzyme complex

ruffle

positive regulation of cell-matrix adhesion

cyclin-dependent protein kinase activity

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

regulation of gene expression

regulation of gene expression

transferase activity

hemopoiesis

cyclin binding

gliogenesis

cell dedifferentiation

regulation of erythrocyte differentiation

negative regulation of osteoblast differentiation

negative regulation of cell cycle

positive regulation of fibroblast proliferation

negative regulation of epithelial cell proliferation

cell division

Cell cycle

p53 signaling pathway

Pathways in cancer

Pancreatic cancer

Glioma

Melanoma

Chronic myeloid leukemia

Small cell lung cancer

Non-small cell lung cancer

1558290_a_at 0.272 5.092 2.524 2.320e-02 0.235 -3.486 PVT1 Pvt1 oncogene (non-protein coding) 8 128875960 BG200951 8q24 Hs.133107 Hs.675281 12    
208660_at 0.343 11.140 2.524 2.321e-02 0.235 -3.487 CS citrate synthase 12 -54951749 BC000105 12q13.2-q13.3 Hs.430606 Hs.715526 20

citrate (Si)-synthase activity

citrate (Si)-synthase activity

mitochondrion

mitochondrial matrix

mitochondrial matrix

tricarboxylic acid cycle

transferase activity

cellular carbohydrate metabolic process

Citrate cycle (TCA cycle)

Glyoxylate and dicarboxylate metabolism

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

200707_at 0.277 4.896 2.523 2.323e-02 0.236 -3.487 PRKCSH protein kinase C substrate 80K-H 19 11407268 NM_002743 19p13.2 Hs.610830 32

molecular_function

calcium ion binding

protein binding

intracellular

endoplasmic reticulum

protein kinase cascade

 
209176_at -0.230 5.664 -2.523 2.324e-02 0.236 -3.488 SEC23IP SEC23 interacting protein 10 121642212 AI332962 10q25-q26 Hs.435004 8

protein binding

cytoplasm

endoplasmic reticulum

ER-Golgi intermediate compartment

intracellular protein transport

Golgi organization

membrane

cytoplasmic vesicle

metal ion binding

 
32088_at -0.355 3.964 -2.523 2.325e-02 0.236 -3.488 BLZF1 basic leucine zipper nuclear factor 1 1 167603817 U79751 1q24 Hs.130746 16

regulation of cell growth

transcription factor activity

nucleus

cytoplasm

Golgi apparatus

Golgi lumen

regulation of transcription from RNA polymerase II promoter

cell proliferation

protein transport

vesicle-mediated transport

 
201413_at 0.314 8.526 2.522 2.326e-02 0.236 -3.489 HSD17B4 hydroxysteroid (17-beta) dehydrogenase 4 5 118816046 NM_000414 5q21 Hs.406861 44

very-long-chain fatty acid metabolic process

3-hydroxyacyl-CoA dehydrogenase activity

3-hydroxyacyl-CoA dehydrogenase activity

estradiol 17-beta-dehydrogenase activity

sterol carrier activity

protein binding

mitochondrion

peroxisome

peroxisomal matrix

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

sterol transporter activity

oxidoreductase activity

lyase activity

isomerase activity

3alpha,7alpha,12alpha-trihydroxy-5beta-cholest-24-enoyl-CoA hydratase activity

oxidation reduction

Sertoli cell development

Primary bile acid biosynthesis

Metabolic pathways

227068_at -0.561 7.785 -2.522 2.327e-02 0.236 -3.489 PGK1 phosphoglycerate kinase 1 X 77246321 AA069778 Xq13 Hs.78771 52

nucleotide binding

phosphoglycerate kinase activity

ATP binding

cytoplasm

glycolysis

phosphorylation

transferase activity

Glycolysis / Gluconeogenesis

Carbon fixation in photosynthetic organisms

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

231876_at 0.279 6.398 2.522 2.328e-02 0.236 -3.489 TRIM56 tripartite motif-containing 56 7 100515505 AL512757 7q22.1 Hs.521092 5

protein binding

intracellular

zinc ion binding

metal ion binding

 
203317_at 0.264 4.215 2.522 2.329e-02 0.236 -3.490 PSD4 pleckstrin and Sec7 domain containing 4 2 113648030 NM_012455 2q13 Hs.516306 8

ARF guanyl-nucleotide exchange factor activity

intracellular

plasma membrane

regulation of ARF protein signal transduction

Endocytosis

219298_at 0.441 8.296 2.522 2.330e-02 0.236 -3.490 ECHDC3 enoyl Coenzyme A hydratase domain containing 3 10 11824361 NM_024693 10p14 Hs.22242 4

catalytic activity

mitochondrion

metabolic process

 
1556262_at -0.250 5.895 -2.521 2.331e-02 0.236 -3.490 PWRN1 Prader-Willi region non-protein coding RNA 1 15 22354396 AK058147 15q11.2 Hs.456065 2    
202966_at 0.354 3.606 2.521 2.331e-02 0.236 -3.490 CAPN6 calpain 6 X -110374986 NM_014289 Xq23 Hs.496593 8

calcium-dependent cysteine-type endopeptidase activity

intracellular

proteolysis

 
202833_s_at 0.229 2.718 2.521 2.331e-02 0.236 -3.491 SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 14 -93912836, -93912836 NM_000295 14q32.1 Hs.525557 265

protease binding

serine-type endopeptidase inhibitor activity

protein binding

extracellular region

extracellular region

proteinaceous extracellular matrix

extracellular space

acute-phase response

blood coagulation

peptidase activity

peptidase inhibitor activity

platelet alpha granule lumen

Complement and coagulation cascades

229876_at -0.915 8.989 -2.521 2.332e-02 0.236 -3.491 PHKA1 phosphorylase kinase, alpha 1 (muscle) X -71715388 BE503584 Xq12-q13 Hs.201379 12

catalytic activity

phosphorylase kinase activity

calmodulin binding

cytoplasm

plasma membrane

carbohydrate metabolic process

glycogen metabolic process

generation of precursor metabolites and energy

intracellular membrane-bounded organelle

Calcium signaling pathway

Insulin signaling pathway

239297_at 0.240 4.095 2.521 2.334e-02 0.236 -3.492 C8orf79 chromosome 8 open reading frame 79 8 12847553, 12914143 BE932011 8p22 Hs.202521 5

metabolic process

methyltransferase activity

transferase activity

 
225677_at -0.324 7.799 -2.521 2.334e-02 0.236 -3.492 BCAP29 B-cell receptor-associated protein 29 7 107007657, 107008439 AW152589 7q22-q31 Hs.303787 12

endoplasmic reticulum

intracellular protein transport

apoptosis

membrane

integral to membrane

vesicle-mediated transport

 
201995_at 0.223 5.595 2.520 2.336e-02 0.236 -3.492 EXT1 exostoses (multiple) 1 8 -118880782 NM_000127 8q24.11-q24.13 Hs.492618 53

Golgi membrane

skeletal system development

ossification

protein binding

endoplasmic reticulum

Golgi apparatus

glycosaminoglycan biosynthetic process

signal transduction

gastrulation

endoderm development

mesoderm development

heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process

membrane

integral to membrane

integral to endoplasmic reticulum membrane

heparan sulfate N-acetylglucosaminyltransferase activity

protein homodimerization activity

protein heterodimerization activity

glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity

N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity

Heparan sulfate biosynthesis

Metabolic pathways

238402_s_at 0.265 6.487 2.520 2.339e-02 0.236 -3.494 FLJ35220 hypothetical protein FLJ35220 17 76003561 AI311040 17q25.3 Hs.389678 2

endonuclease activity

DNA repair

response to DNA damage stimulus

hydrolase activity

 
212333_at -0.319 8.992 -2.519 2.342e-02 0.237 -3.495 FAM98A family with sequence similarity 98, member A 2 -33662232 AL049943 2p22.3 Hs.468140 2    
232812_at 0.239 3.841 2.519 2.343e-02 0.237 -3.495 LOC401052 hypothetical LOC401052 3 -10023101 AK022260 3p25.3 Hs.662766 1    
204200_s_at 0.312 5.973 2.519 2.344e-02 0.237 -3.496 PDGFB platelet-derived growth factor beta polypeptide (simian sarcoma viral (v-sis) oncogene homolog) 22 -37949632, -37949632 NM_002608 22q12.3-q13.1 22q13.1 Hs.1976 140

response to hypoxia

positive regulation of endothelial cell proliferation

monocyte chemotaxis

platelet-derived growth factor receptor binding

collagen binding

extracellular region

extracellular region

cytoplasm

substrate-bound cell migration

transforming growth factor beta receptor signaling pathway

growth factor activity

response to wounding

cell surface

negative regulation of phosphatidylinositol biosynthetic process

negative regulation of platelet activation

positive regulation of smooth muscle cell migration

membrane

cell growth

cell projection assembly

actin cytoskeleton organization

negative regulation of cell migration

platelet dense granule lumen

protein homodimerization activity

positive regulation of MAP kinase activity

cell surface binding

positive regulation of blood vessel endothelial cell migration

positive regulation of DNA replication

protein heterodimerization activity

platelet-derived growth factor receptor signaling pathway

positive regulation of fibroblast proliferation

platelet-derived growth factor binding

regulation of peptidyl-tyrosine phosphorylation

positive regulation of chemotaxis

cell chemotaxis

MAPK signaling pathway

Cytokine-cytokine receptor interaction

Focal adhesion

Gap junction

Regulation of actin cytoskeleton

Pathways in cancer

Renal cell carcinoma

Glioma

Prostate cancer

Melanoma

1564029_at -0.218 2.763 -2.518 2.345e-02 0.237 -3.496 USP49 ubiquitin specific peptidase 49 6 -41873360 AL049937 6p21 Hs.665742 5

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

zinc ion binding

metal ion binding

 
212237_at -0.356 6.826 -2.518 2.346e-02 0.237 -3.496 ASXL1 additional sex combs like 1 (Drosophila) 20 30409813 N64780 20q11.1 Hs.374043 13

protein binding

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
1557455_s_at -0.472 5.701 -2.518 2.347e-02 0.237 -3.497 MOSPD1 motile sperm domain containing 1 X -133849327 AF086333 Xq26.3 Hs.590789 4

structural molecule activity

membrane

integral to membrane

 
226732_at -0.466 6.980 -2.517 2.349e-02 0.237 -3.497 RBM33 RNA binding motif protein 33 7 155129963 AI823400 7q36.3 Hs.591815 10

RNA binding

 
219995_s_at 0.634 2.261 2.517 2.350e-02 0.237 -3.498 ZNF750 zinc finger protein 750 17 -78380598 NM_024702 17q25.3 Hs.464391 Hs.653124 6

intracellular

zinc ion binding

 
227192_at 0.233 4.884 2.517 2.351e-02 0.237 -3.498 PRRT2 proline-rich transmembrane protein 2 16 29730909 BF060707 16p11.2 Hs.655071 5

response to biotic stimulus

membrane

integral to membrane

 
211926_s_at 0.430 7.188 2.517 2.352e-02 0.237 -3.498 MYH9 myosin, heavy chain 9, non-muscle 22 -35007269 AI827941 22q13.1 Hs.474751 112

microfilament motor activity

nucleotide binding

meiotic spindle organization

cell morphogenesis involved in differentiation

cytokinesis

angiogenesis

in utero embryonic development

stress fiber

ruffle

establishment of T cell polarity

immunological synapse

uropod

calmodulin binding

ATP binding

nucleus

cytoplasm

spindle

contractile ring

cytosol

plasma membrane

cell-cell adherens junction

cell cortex

membrane protein ectodomain proteolysis

cell motion

meiotic metaphase I

integrin-mediated signaling pathway

myoblast fusion

integrin complex

regulation of cell shape

protein transport

cell-cell adhesion

myosin complex

ATPase activity

actin filament-based movement

platelet formation

monocyte differentiation

cortical cytoskeleton

actin-dependent ATPase activity

actin cytoskeleton reorganization

neuromuscular junction

cleavage furrow

uropod organization

protein homodimerization activity

protein anchor

ADP binding

blood vessel endothelial cell migration

leukocyte migration

actin filament binding

actin filament binding

establishment of meiotic spindle localization

Tight junction

Regulation of actin cytoskeleton

209475_at -0.461 8.447 -2.517 2.352e-02 0.237 -3.498 USP15 ubiquitin specific peptidase 15 12 60940453 AF106069 12q14 Hs.434951 14

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

protein binding

ubiquitin-dependent protein catabolic process

peptidase activity

 
226527_at -0.284 6.621 -2.517 2.352e-02 0.237 -3.499 RPRD2 regulation of nuclear pre-mRNA domain containing 2 1 148603613 AI569785 1q21.3 Hs.213666 9

protein binding

 
235324_at -0.229 3.770 -2.516 2.357e-02 0.237 -3.500 SFRS3 splicing factor, arginine/serine-rich 3 6 36670067 AI445255 6p21 Hs.405144 34

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

RNA splicing

 
217863_at -0.385 6.856 -2.515 2.360e-02 0.237 -3.502 PIAS1 protein inhibitor of activated STAT, 1 15 66133625 AI348378 15q Hs.162458 67

DNA binding

transcription coactivator activity

transcription corepressor activity

nucleus

JAK-STAT cascade

zinc ion binding

nuclear speck

SUMO ligase activity

enzyme binding

modification-dependent protein catabolic process

androgen receptor signaling pathway

positive regulation of protein sumoylation

regulation of transcription

positive regulation of transcription, DNA-dependent

metal ion binding

androgen receptor binding

Ubiquitin mediated proteolysis

Jak-STAT signaling pathway

Pathways in cancer

Small cell lung cancer

221203_s_at 0.305 5.690 2.515 2.360e-02 0.237 -3.502 YEATS2 YEATS domain containing 2 3 184898299 NM_018023 3q27.1 Hs.632575 5

nucleus

regulation of transcription, DNA-dependent

 
211368_s_at 0.497 4.141 2.514 2.367e-02 0.238 -3.504 CASP1 caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase) 11 -104401446 U13700 11q23 Hs.2490 134

cysteine-type endopeptidase activity

protein binding

intracellular

cytoplasm

proteolysis

signal transduction

peptidase activity

caspase activator activity

regulation of apoptosis

positive regulation of I-kappaB kinase/NF-kappaB cascade

Amyotrophic lateral sclerosis (ALS)

236847_at 0.429 5.663 2.514 2.367e-02 0.238 -3.504 C19orf18 chromosome 19 open reading frame 18 19 -63161616 AI650509 19q13.43 Hs.134209 2

membrane

integral to membrane

 
226864_at -0.337 11.198 -2.514 2.367e-02 0.238 -3.504 PKIA protein kinase (cAMP-dependent, catalytic) inhibitor alpha 8 79590890 BF245954 8q21.12 Hs.433700 15

negative regulation of transcription from RNA polymerase II promoter

protein kinase inhibitor activity

cAMP-dependent protein kinase inhibitor activity

soluble fraction

nucleus

cytoplasm

negative regulation of protein kinase activity

regulation of G2/M transition of mitotic cell cycle

negative regulation of protein import into nucleus

negative regulation of catalytic activity

 
228829_at -0.484 6.651 -2.513 2.369e-02 0.238 -3.505 ATF7 activating transcription factor 7 12 -52192109, -52192109 AI279868 12q13 Hs.12286 18

transcription factor activity

intracellular

nucleus

cytoplasm

regulation of transcription, DNA-dependent

zinc ion binding

sequence-specific DNA binding

metal ion binding

protein dimerization activity

 
229477_at 0.627 5.507 2.513 2.372e-02 0.238 -3.506 THRSP thyroid hormone responsive (SPOT14 homolog, rat) 11 77452554 AW272342 11q13.5 Hs.591969 12

protein binding

nucleus

lipid metabolic process

 
219319_at 0.221 5.926 2.512 2.374e-02 0.238 -3.507 HIF3A hypoxia inducible factor 3, alpha subunit 19 51492144, 51493498, 51498715 NM_022462 19q13.32 Hs.420830 12

DNA binding

signal transducer activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

signal transduction

transcription regulator activity

 
214434_at 0.280 5.592 2.512 2.375e-02 0.238 -3.507 HSPA12A heat shock 70kDa protein 12A 10 -118420692 AB007877 10q26.12 Hs.654682 8

nucleotide binding

ATP binding

 
235120_at -0.214 4.780 -2.512 2.376e-02 0.238 -3.508 SEC22C SEC22 vesicle trafficking protein homolog C (S. cerevisiae) 3 -42569395, -42564476 W52819 3p22.1 Hs.445892 4

endoplasmic reticulum

ER to Golgi vesicle-mediated transport

protein transport

membrane

integral to membrane

vesicle-mediated transport

 
233517_s_at 0.242 5.630 2.512 2.377e-02 0.238 -3.508 HIF3A hypoxia inducible factor 3, alpha subunit 19 51492144, 51493498, 51498715 AK021421 19q13.32 Hs.420830 12

DNA binding

signal transducer activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

signal transduction

transcription regulator activity

 
1569320_at -0.393 5.394 -2.512 2.377e-02 0.238 -3.508 GPBP1L1 GC-rich promoter binding protein 1-like 1 1 -45865564 CA391618 1p34.1 Hs.238432 4

DNA binding

nucleus

regulation of transcription

 
202241_at -0.767 8.827 -2.511 2.378e-02 0.239 -3.509 TRIB1 tribbles homolog 1 (Drosophila) 8 126511744 NM_025195 8q24.13 Hs.444947 19

protein kinase activity

protein kinase inhibitor activity

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

negative regulation of protein kinase activity

JNK cascade

transcription factor binding

negative regulation of smooth muscle cell migration

mitogen-activated protein kinase kinase binding

negative regulation of lipopolysaccharide-mediated signaling pathway

response to lipopolysaccharide

regulation of MAP kinase activity

negative regulation of transcription factor activity

negative regulation of smooth muscle cell proliferation

 
1553366_s_at -0.608 8.703 -2.511 2.380e-02 0.239 -3.509 ANKRD23 ankyrin repeat domain 23 2 -96867377 NM_144994 2q11.2 Hs.643430 8

nucleus

 
226069_at 0.525 5.238 2.511 2.380e-02 0.239 -3.509 PRICKLE1 prickle homolog 1 (Drosophila) 12 -41138407, -41138407, -41138407 AA404269 12q12 Hs.524348 Hs.639400 14

nucleus

cytoplasm

cytosol

zinc ion binding

membrane

nuclear membrane

metal ion binding

Wnt signaling pathway

202776_at -0.303 7.875 -2.511 2.381e-02 0.239 -3.509 DNTTIP2 deoxynucleotidyltransferase, terminal, interacting protein 2 1 -94107923 NM_014597 1p22.1 Hs.85769 10

nucleus

regulation of transcription

 
240037_at 0.277 4.505 2.510 2.382e-02 0.239 -3.510 ITPRIPL1 inositol 1,4,5-triphosphate receptor interacting protein-like 1 2 96354788, 96354795, 96355661, 96355671 R37132 2q11.2 Hs.65009 3

membrane

integral to membrane

 
219229_at 0.361 5.525 2.510 2.383e-02 0.239 -3.510 SLCO3A1 solute carrier organic anion transporter family, member 3A1 15 90197941, 90197941 NM_013272 15q26 Hs.311187 10

transporter activity

ion transport

membrane

integral to membrane

 
223356_s_at 0.227 8.428 2.510 2.384e-02 0.239 -3.511 MTIF3 mitochondrial translational initiation factor 3 13 -26907780 BG529919 13q12.2 Hs.534582 6

translation initiation factor activity

mitochondrion

regulation of translational initiation

ribosome disassembly

ribosomal small subunit binding

 
1568924_a_at -0.422 4.037 -2.510 2.384e-02 0.239 -3.511 IQUB IQ motif and ubiquitin domain containing 7 -122879473 BC026173 7q31.32 Hs.159650 Hs.719777 5    
227448_at -0.579 6.543 -2.510 2.384e-02 0.239 -3.511 ARGLU1 arginine and glutamate rich 1 13 -105993662 AL045916 13q33.3 Hs.508644 Hs.701016 3    
226650_at 0.388 6.071 2.510 2.384e-02 0.239 -3.511 ZFAND2A zinc finger, AN1-type domain 2A 7 -1159069 AI984061 7p22.3 Hs.648111 2

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
218353_at 0.528 9.716 2.510 2.385e-02 0.239 -3.511 RGS5 regulator of G-protein signaling 5 1 -161378720 NM_025226 1q23.1 Hs.24950 26

signal transducer activity

GTPase activator activity

regulation of G-protein coupled receptor protein signaling pathway

negative regulation of signal transduction

 
205390_s_at 0.488 8.264 2.510 2.385e-02 0.239 -3.511 ANK1 ankyrin 1, erythrocytic 8 -41629901, -41629901, -41629900 NM_000037 8p11.1 Hs.654438 Hs.667377 49

structural constituent of cytoskeleton

cytoplasm

plasma membrane

exocytosis

cytoskeleton organization

signal transduction

cytoskeletal adaptor activity

spectrin-associated cytoskeleton

basolateral plasma membrane

sarcoplasmic reticulum

enzyme binding

spectrin binding

M band

maintenance of epithelial cell apical/basal polarity

 
202411_at 0.509 7.766 2.509 2.387e-02 0.239 -3.512 IFI27 interferon, alpha-inducible protein 27 14 93646831 NM_005532 14q32 Hs.532634 24

molecular_function

biological_process

membrane

integral to membrane

 
230024_at 0.290 6.081 2.509 2.388e-02 0.239 -3.512 AARS2 alanyl-tRNA synthetase 2, mitochondrial (putative) 6 -44374440 AI183453 6p21.1 Hs.158381 7

nucleotide binding

nucleic acid binding

alanine-tRNA ligase activity

ATP binding

cytoplasm

mitochondrion

mitochondrial matrix

translation

alanyl-tRNA aminoacylation

ligase activity

tRNA aminoacylation

Aminoacyl-tRNA biosynthesis

219366_at -0.457 6.794 -2.509 2.388e-02 0.239 -3.512 AVEN apoptosis, caspase activation inhibitor 15 -31945719 NM_020371 15q13.1 Hs.555966 10

protein binding

intracellular

membrane fraction

apoptosis

anti-apoptosis

membrane

 
242194_at 0.204 7.223 2.509 2.388e-02 0.239 -3.512 CUL4A cullin 4A 13 112911086, 112911931 W80462 13q34 Hs.339735 48

G1/S transition of mitotic cell cycle

protein binding

DNA repair

ubiquitin-dependent protein catabolic process

response to DNA damage stimulus

cell cycle arrest

negative regulation of cell proliferation

induction of apoptosis by intracellular signals

cullin-RING ubiquitin ligase complex

ubiquitin protein ligase binding

Nucleotide excision repair

Ubiquitin mediated proteolysis

225919_s_at -0.296 5.703 -2.509 2.388e-02 0.239 -3.512 C9orf72 chromosome 9 open reading frame 72 9 -27550498, -27536543 AI832598 9p21.2 Hs.493639 4    
225215_s_at -0.295 8.333 -2.509 2.388e-02 0.239 -3.512 MTRF1L mitochondrial translational release factor 1-like 6 -153350092 BF665339 6q25-q26 Hs.225836 Hs.304818 9

cytoplasm

mitochondrion

translational termination

translation release factor activity, codon specific

 
207468_s_at 0.241 4.364 2.509 2.388e-02 0.239 -3.512 SFRP5 secreted frizzled-related protein 5 10 -99516497 NM_003015 10q24.1 Hs.279565 14

protein binding

extracellular region

extracellular space

apoptosis

establishment or maintenance of cell polarity

signal transduction

multicellular organismal development

visual perception

anatomical structure morphogenesis

Wnt receptor signaling pathway

cell differentiation

Wnt signaling pathway

205508_at -0.299 7.804 -2.509 2.388e-02 0.239 -3.512 SCN1B sodium channel, voltage-gated, type I, beta 19 40213373, 40213373 NM_001037 19q13.1 Hs.436646 28

voltage-gated ion channel activity

voltage-gated sodium channel activity

ion transport

sodium ion transport

synaptic transmission

membrane

integral to membrane

sodium ion binding

 
225524_at 0.393 6.136 2.509 2.389e-02 0.239 -3.512 ANTXR2 anthrax toxin receptor 2 4 -81117685, -81041796 AU152178 4q21.21 Hs.162963 22

receptor activity

protein binding

extracellular region

endoplasmic reticulum

plasma membrane

integral to membrane

metal ion binding

 
209554_at 0.269 5.067 2.509 2.389e-02 0.239 -3.513 CD36 CD36 molecule (thrombospondin receptor) 7 80069439, 80105767, 80105767, 80113580, 80113697 BE968792 7q11.2 Hs.120949 173

positive regulation of cell-matrix adhesion

low-density lipoprotein receptor activity

membrane fraction

Golgi apparatus

plasma membrane

integral to plasma membrane

lipid metabolic process

transport

cell adhesion

nitric oxide mediated signal transduction

blood coagulation

high-density lipoprotein binding

lipid binding

cell surface

cell surface

positive regulation of foam cell differentiation

plasma membrane long-chain fatty acid transport

lipid storage

cGMP-mediated signaling

cholesterol transport

platelet alpha granule membrane

lipoprotein particle clearance

lipoprotein catabolic process

lipoprotein transport

apoptotic cell clearance

transforming growth factor beta binding

thrombospondin receptor activity

PPAR signaling pathway

ECM-receptor interaction

Hematopoietic cell lineage

Adipocytokine signaling pathway

224600_at -0.490 6.679 -2.509 2.389e-02 0.239 -3.513 CGGBP1 CGG triplet repeat binding protein 1 3 -88183789 BE501318 3p12-p11.1 Hs.444818 14

DNA binding

double-stranded DNA binding

nucleus

regulation of transcription

 
218955_at -0.235 7.480 -2.509 2.389e-02 0.239 -3.513 BRF2 BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like 8 -37820560 NM_018310 8p11.23 Hs.709301 11

protein binding

nucleus

transcription factor complex

transcription initiation

regulation of transcription, DNA-dependent

zinc ion binding

transcription regulator activity

metal ion binding

 
1553264_a_at 0.237 6.122 2.509 2.390e-02 0.239 -3.513 SYN1 synapsin I X -47316243 NM_006950 Xp11.23 Hs.225936 34

actin binding

catalytic activity

transporter activity

ATP binding

Golgi apparatus

synaptic transmission

neurotransmitter secretion

synaptic vesicle

cell junction

synapse

 
1568604_a_at -0.302 3.979 -2.509 2.390e-02 0.239 -3.513 CADPS Ca++-dependent secretion activator 3 -62359061 AI912173 3p14.2 Hs.654933 14

calcium ion binding

cytosol

exocytosis

lipid binding

protein transport

membrane

cell junction

cytoplasmic vesicle

synapse

 
225967_s_at 0.274 9.445 2.509 2.391e-02 0.239 -3.513 C17orf89 chromosome 17 open reading frame 89 17 76827705 BF683512 17q25.3 Hs.356545 2    
221822_at -0.398 6.879 -2.508 2.393e-02 0.239 -3.514 CCDC101 coiled-coil domain containing 101 16 28472749 BE544663 16p11.2 Hs.655476 6

nucleus

regulation of transcription

 
230611_at -0.290 9.547 -2.508 2.394e-02 0.239 -3.515 SYPL2 synaptophysin-like 2 1 109810622 AW271199 1p13.3 Hs.528366 5

transporter activity

transport

synaptic vesicle

membrane

integral to membrane

 
222734_at 0.823 5.471 2.508 2.395e-02 0.239 -3.515 WARS2 tryptophanyl tRNA synthetase 2, mitochondrial 1 -119375361 BF515963 1p13.3-p13.1 Hs.523506 10

nucleotide binding

tryptophan-tRNA ligase activity

ATP binding

cytoplasm

mitochondrion

mitochondrial matrix

tryptophanyl-tRNA aminoacylation

ligase activity

Tryptophan metabolism

Aminoacyl-tRNA biosynthesis

51226_at 0.229 3.438 2.508 2.395e-02 0.239 -3.515 RBM12B RNA binding motif protein 12B 8 -94812903 N53536 8q22.1 Hs.192788 3

nucleotide binding

RNA binding

 
202686_s_at 0.314 6.688 2.507 2.397e-02 0.239 -3.516 AXL AXL receptor tyrosine kinase 19 46416947 NM_021913 19q13.1 Hs.590970 49

nucleotide binding

transmembrane receptor protein tyrosine kinase activity

receptor activity

protein binding

ATP binding

integral to plasma membrane

protein amino acid phosphorylation

signal transduction

membrane

transferase activity

cellular response to extracellular stimulus

 
209023_s_at -0.493 6.548 -2.507 2.398e-02 0.239 -3.516 STAG2 stromal antigen 2 X 122922155, 122923236 BC001765 Xq25 Hs.496710 Hs.624663 18

chromatin

protein binding

nucleus

cytoskeleton

cell cycle

chromosome segregation

mitosis

meiosis

biological_process

cell division

Cell cycle

209498_at 0.258 5.401 2.507 2.399e-02 0.239 -3.516 CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 19 -47703297 X16354 19q13.2 Hs.512682 97

angiogenesis

molecular_function

extracellular region

membrane fraction

plasma membrane

plasma membrane

integral to plasma membrane

homophilic cell adhesion

integrin-mediated signaling pathway

cell migration

 
238333_s_at 0.284 5.029 2.506 2.401e-02 0.239 -3.517 MTG1 mitochondrial GTPase 1 homolog (S. cerevisiae) 10 135057610 AI355435 10q26.3 Hs.501578 9

nucleotide binding

GTP binding

intracellular

mitochondrion

 
223457_at 0.368 4.730 2.506 2.401e-02 0.239 -3.517 COPG2 coatomer protein complex, subunit gamma 2 7 -129933315 AB047847 7q32 Hs.6421 18

structural molecule activity

protein binding

cytoplasm

Golgi apparatus

Golgi-associated vesicle

intracellular protein transport

retrograde vesicle-mediated transport, Golgi to ER

intra-Golgi vesicle-mediated transport

membrane

vesicle-mediated transport

membrane coat

COPI vesicle coat

cytoplasmic vesicle

 
230438_at -0.541 8.051 -2.506 2.402e-02 0.239 -3.517 TBX15 T-box 15 1 -119227188 AI039005 1p11.1 Hs.146196 5

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

 
226688_at -0.399 7.193 -2.506 2.402e-02 0.239 -3.518 C3orf23 chromosome 3 open reading frame 23 3 44354614, 44354947, 44354947 AW003508 3p21.31 Hs.55131 8

mitochondrion

 
1569323_at -0.504 4.935 -2.506 2.404e-02 0.239 -3.518 PTPRG protein tyrosine phosphatase, receptor type, G 3 61522282 BU853579 3p21-p14 Hs.595541 Hs.654488 19

transmembrane receptor protein tyrosine phosphatase activity

integral to plasma membrane

protein amino acid dephosphorylation

transmembrane receptor protein tyrosine kinase signaling pathway

membrane

hydrolase activity

identical protein binding

 
242640_at -0.199 3.773 -2.506 2.405e-02 0.239 -3.518 C19orf55 chromosome 19 open reading frame 55 19 40940883 AA503653 19q13.12 Hs.527982 3    
228167_at 0.200 2.915 2.505 2.407e-02 0.239 -3.519 KLHL6 kelch-like 6 (Drosophila) 3 -184688012 AW574798   Hs.659147 6

protein binding

 
202033_s_at -0.609 8.597 -2.505 2.407e-02 0.239 -3.519 RB1CC1 RB1-inducible coiled-coil 1 8 -53697570 BG402105 8q11 Hs.196102 29

liver development

positive regulation of protein amino acid phosphorylation

protein binding

nucleus

cell cycle

JNK cascade

heart development

negative regulation of apoptosis

regulation of transcription

positive regulation of cell size

 
1563478_at -0.247 3.686 -2.505 2.407e-02 0.239 -3.519 KIAA1671 KIAA1671 22 23753940 AL832019 22q11.23 Hs.419171 4    
207305_s_at -0.344 8.718 -2.505 2.408e-02 0.239 -3.520 KIAA1012 KIAA1012 18 -27663133 NM_014939 18q12.1 Hs.202001 8

Golgi apparatus

cis-Golgi network

ER to Golgi vesicle-mediated transport

vesicle-mediated transport

 
218930_s_at -0.599 6.449 -2.505 2.408e-02 0.239 -3.520 TMEM106B transmembrane protein 106B 7 12217372 NM_018374 7p21.3 Hs.396358 10

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
217825_s_at -0.274 4.981 -2.505 2.408e-02 0.239 -3.520 UBE2J1 ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast) 6 -90093062 AF151039 6q15 Hs.163776 12

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

endoplasmic reticulum

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

Parkinson's disease

1555167_s_at -0.515 6.552 -2.505 2.409e-02 0.239 -3.520 NAMPT nicotinamide phosphoribosyltransferase 7 -105675967 BC020691 7q22.3 Hs.489615 98

cytokine activity

cytoplasm

cytosol

signal transduction

cell-cell signaling

positive regulation of cell proliferation

NAD biosynthetic process

transferase activity, transferring glycosyl groups

pyridine nucleotide biosynthetic process

nicotinamide phosphoribosyltransferase activity

nicotinamide phosphoribosyltransferase activity

Nicotinate and nicotinamide metabolism

219930_at -0.211 4.258 -2.504 2.411e-02 0.239 -3.521 KLF8 Kruppel-like factor 8 X 56275546, 56275594 NM_007250 Xp11.21 Hs.646614 13

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
230807_at 0.251 4.882 2.504 2.411e-02 0.239 -3.521 CCDC151 coiled-coil domain containing 151 19 -11392271 AI807422 19p13.2 Hs.124010 3    
209513_s_at 0.319 9.661 2.504 2.412e-02 0.239 -3.521 HSDL2 hydroxysteroid dehydrogenase like 2 9 114182171 BC004331 9q32 Hs.59486 6

binding

sterol carrier activity

oxidoreductase activity

oxidation reduction

 
225647_s_at -1.132 4.910 -2.504 2.413e-02 0.239 -3.521 CTSC cathepsin C 11 -87693628, -87666407 AI246687 11q14.1-q14.3 Hs.128065 Hs.706874 51

cysteine-type endopeptidase activity

lysosome

proteolysis

immune response

peptidase activity

chloride ion binding

Lysosome

206451_at -0.243 5.149 -2.504 2.413e-02 0.239 -3.522 TBCCD1 TBCC domain containing 1 3 -187746551, -187746551 NM_018138 3q27.3 Hs.518469 3

binding

 
214791_at 0.443 5.327 2.504 2.413e-02 0.239 -3.522 SP140L SP140 nuclear body protein-like 2 230900137 AK023116 2q37.1 Hs.662198 3

DNA binding

binding

nucleus

zinc ion binding

metal ion binding

 
221276_s_at -0.470 9.068 -2.504 2.414e-02 0.239 -3.522 SYNC syncoilin, intermediate filament protein 1 -32918093 NM_030786 1p34.3-p33 Hs.712631 6

structural molecule activity

protein binding

cytoplasm

cytosol

intermediate filament

Z disc

sarcolemma

intermediate filament-based process

synapse

perinuclear region of cytoplasm

 
203404_at 0.320 6.255 2.504 2.415e-02 0.239 -3.522 ARMCX2 armadillo repeat containing, X-linked 2 X -100796925 NM_014782 Xq21.33-q22.2 Hs.48924 7

binding

membrane

integral to membrane

 
219165_at 0.600 8.954 2.503 2.417e-02 0.239 -3.523 PDLIM2 PDZ and LIM domain 2 (mystique) 8 22492587, 22493928, 22493928 NM_021630 8p21.2 Hs.632034 10

protein binding

nucleus

cytoplasm

cytoskeleton

zinc ion binding

cell surface

metal ion binding

 
204113_at -0.455 4.814 -2.503 2.417e-02 0.239 -3.523 CUGBP1 CUG triplet repeat, RNA binding protein 1 11 -47446520, -47446520, -47446520 NM_006560 11p11 Hs.632137 34

nucleotide binding

translation repressor activity, nucleic acid binding

mRNA binding

nucleus

cytoplasm

mRNA splice site selection

mRNA processing

germ cell development

embryonic development

RNA interference

ribonucleoprotein complex

BRE binding

 
220647_s_at 0.244 8.184 2.503 2.418e-02 0.239 -3.523 CHCHD8 coiled-coil-helix-coiled-coil-helix domain containing 8 11 -73261360 NM_016565 11q13.4 Hs.475387 6    
201903_at 0.309 10.973 2.502 2.421e-02 0.240 -3.525 UQCRC1 ubiquinol-cytochrome c reductase core protein I 3 -48611435 NM_003365 3p21.3 Hs.119251 18

catalytic activity

metalloendopeptidase activity

protein binding

mitochondrion

mitochondrial respiratory chain

oxidative phosphorylation

mitochondrial electron transport, ubiquinol to cytochrome c

proteolysis

transport

ubiquinol-cytochrome-c reductase activity

zinc ion binding

aerobic respiration

membrane

electron transport chain

metal ion binding

Oxidative phosphorylation

Metabolic pathways

Cardiac muscle contraction

Alzheimer's disease

Parkinson's disease

Huntington's disease

229328_at 0.294 4.274 2.502 2.422e-02 0.240 -3.525 ZNF540 zinc finger protein 540 19 42734147 T90358 19q13.12 Hs.121283 5

DNA binding

intracellular

nucleus

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
205522_at 0.422 5.406 2.502 2.423e-02 0.240 -3.525 HOXD4 homeobox D4 2 176724358 NM_014621 2q31.1 Hs.591609 19

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anterior/posterior pattern formation

sequence-specific DNA binding

embryonic skeletal system morphogenesis

 
221239_s_at 0.242 3.601 2.502 2.423e-02 0.240 -3.525 FCRL2 Fc receptor-like 2 1 -155982147 NM_030764 1q21 Hs.437393 13

receptor activity

SH3/SH2 adaptor activity

soluble fraction

plasma membrane

cell-cell signaling

integral to membrane

 
202752_x_at -0.276 6.835 -2.502 2.424e-02 0.240 -3.526 SLC7A8 solute carrier family 7 (cationic amino acid transporter, y+ system), member 8 14 -22664343, -22664343 NM_012244 14q11.2 Hs.632348 14

protein binding

cytoplasm

plasma membrane

integral to plasma membrane

cellular amino acid metabolic process

transport

response to toxin

organic cation transmembrane transporter activity

neutral amino acid transmembrane transporter activity

L-amino acid transmembrane transporter activity

neutral amino acid transport

L-amino acid transport

toxin transporter activity

peptide antigen binding

metal ion homeostasis

 
239273_s_at 0.212 2.789 2.501 2.425e-02 0.240 -3.526 MMP28 matrix metallopeptidase 28 17 -31129621, -31116988 AI927208 17q11-q21.1 Hs.380710 13

metalloendopeptidase activity

calcium ion binding

extracellular region

proteinaceous extracellular matrix

proteolysis

metabolic process

peptidase activity

zinc ion binding

 
230630_at 0.247 4.187 2.501 2.426e-02 0.240 -3.526 AK3L1 adenylate kinase 3-like 1 1 65385819, 65386100, 65386473 AI566130 1p31.3 Hs.10862 Hs.592601 10

nucleotide binding

adenylate kinase activity

ATP binding

GTP binding

mitochondrion

mitochondrial matrix

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

transferase activity

Purine metabolism

Metabolic pathways

223862_at 0.281 4.698 2.501 2.427e-02 0.240 -3.527 GHRL ghrelin/obestatin prepropeptide 3 -10302433, -10302433 AB035700 3p26-p25 Hs.590080 399

activation of MAPK activity

negative regulation of endothelial cell proliferation

extracellular region

extracellular space

glucose metabolic process

G-protein coupled receptor protein signaling pathway

elevation of cytosolic calcium ion concentration

actin polymerization or depolymerization

adult feeding behavior

response to hormone stimulus

hormone-mediated signaling

dendrite development

negative regulation of angiogenesis

growth hormone-releasing hormone activity

protein tyrosine kinase activator activity

axon

ghrelin receptor binding

positive regulation of insulin secretion

positive regulation of appetite

negative regulation of interleukin-1 beta production

positive regulation of multicellular organism growth

regulation of cell proliferation

negative regulation of circadian sleep/wake cycle, REM sleep

negative regulation of tumor necrosis factor biosynthetic process

negative regulation of apoptosis

response to estrogen stimulus

negative regulation of interleukin-6 biosynthetic process

positive regulation of circadian sleep/wake cycle, non-REM sleep

decidualization

negative regulation of inflammatory response

cartilage development

positive regulation of adrenocorticotropin secretion

positive regulation of cortisol secretion

positive regulation of synaptogenesis

positive regulation of growth hormone secretion

positive regulation of growth hormone receptor signaling pathway

 
235305_s_at 0.351 7.354 2.501 2.427e-02 0.240 -3.527 ECHDC2 enoyl Coenzyme A hydratase domain containing 2 1 -53134491 AI903313 1p32.3 Hs.476319 2

mitochondrion

lipid metabolic process

fatty acid metabolic process

metabolic process

lyase activity

 
209060_x_at -0.549 5.957 -2.501 2.428e-02 0.240 -3.527 NCOA3 nuclear receptor coactivator 3 20 45564063 AI438999 20q12 Hs.592142 140

transcription coactivator activity

histone acetyltransferase activity

signal transducer activity

nucleus

cytoplasm

signal transduction

acyltransferase activity

transferase activity

androgen receptor signaling pathway

transcription regulator activity

positive regulation of transcription, DNA-dependent

thyroid hormone receptor binding

protein N-terminus binding

androgen receptor binding

 
228371_s_at 0.203 3.050 2.501 2.428e-02 0.240 -3.527 C16orf72 chromosome 16 open reading frame 72 16 9093037 BF196007 16p13.2 Hs.221497 3    
217953_at -0.242 2.203 -2.500 2.430e-02 0.240 -3.528 PHF3 PHD finger protein 3 6 64414389 AL050329 6q12 Hs.348921 13

molecular_function

protein binding

cellular_component

nucleus

transcription

multicellular organismal development

zinc ion binding

metal ion binding

 
1559190_s_at 0.380 5.767 2.500 2.430e-02 0.240 -3.528 RDH13 retinol dehydrogenase 13 (all-trans/9-cis) 19 -60247503, -60247503 AL833150 19q13.42 Hs.327631 9

binding

oxidoreductase activity

oxidation reduction

 
202451_at -0.281 6.956 -2.500 2.432e-02 0.240 -3.529 GTF2H1 general transcription factor IIH, polypeptide 1, 62kDa 11 18300391 BC000365 11p15.1-p14 Hs.577202 77

regulation of cyclin-dependent protein kinase activity

nucleotide-excision repair, DNA damage removal

protein binding

nucleus

nucleoplasm

holo TFIIH complex

DNA repair

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

response to DNA damage stimulus

RNA polymerase II carboxy-terminal domain kinase activity

general RNA polymerase II transcription factor activity

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

Basal transcription factors

Nucleotide excision repair

212828_at 1.194 5.994 2.500 2.433e-02 0.240 -3.529 SYNJ2 synaptojanin 2 6 158322906 AA191573 6q25.3 Hs.434494 18

RNA binding

inositol or phosphatidylinositol phosphatase activity

phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity

protein binding

membrane

dephosphorylation

hydrolase activity

Inositol phosphate metabolism

Metabolic pathways

Phosphatidylinositol signaling system

202735_at 0.298 6.521 2.500 2.434e-02 0.240 -3.529 EBP emopamil binding protein (sterol isomerase) X 48265107 NM_006579 Xp11.23-p11.22 Hs.30619 19

C-8 sterol isomerase activity

skeletal system development

steroid delta-isomerase activity

transmembrane receptor activity

endoplasmic reticulum

microsome

integral to plasma membrane

cholesterol biosynthetic process

drug transporter activity

membrane

isomerase activity

hemopoiesis

cholestenol delta-isomerase activity

Steroid biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

1552322_at 0.209 2.160 2.499 2.435e-02 0.240 -3.530 FAM122C family with sequence similarity 122C X 133768889 NM_138819 Xq26.3 Hs.269127 3    
218813_s_at -0.331 5.345 -2.499 2.436e-02 0.240 -3.530 SH3GLB2 SH3-domain GRB2-like endophilin B2 9 -130810133 NM_020145 9q34 Hs.460238 13

protein binding

nucleus

nucleolus

cytoplasm

Endocytosis

206190_at -0.243 4.064 -2.499 2.437e-02 0.240 -3.530 GPR17 G protein-coupled receptor 17 2 128119908 NM_005291 2q21 Hs.46453 Hs.688940 8

receptor activity

G-protein coupled receptor activity

chemokine receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

purinergic nucleotide receptor activity, G-protein coupled

 
201051_at 0.286 9.005 2.499 2.438e-02 0.240 -3.531 ANP32A acidic (leucine-rich) nuclear phosphoprotein 32 family, member A 15 -66857930 BE560202 15q22.3-q23 Hs.458747 44

protein binding

nucleus

cytoplasm

endoplasmic reticulum

nucleocytoplasmic transport

nucleocytoplasmic transport

intracellular signaling cascade

regulation of transcription

perinuclear region of cytoplasm

 
238423_at 0.366 6.617 2.499 2.439e-02 0.240 -3.531 SYTL3 synaptotagmin-like 3 6 158991033 AI674404 6q25.3 Hs.436977 6

protein binding

intracellular protein transport

zinc ion binding

membrane

Rab GTPase binding

 
201857_at -0.226 9.409 -2.498 2.439e-02 0.240 -3.531 ZFR zinc finger RNA binding protein 5 -32390212 NM_016107 5p13.3 Hs.435231 6

DNA binding

RNA binding

intracellular

nucleus

nucleolus

cytoplasm

multicellular organismal development

zinc ion binding

 
222234_s_at 0.430 5.614 2.498 2.440e-02 0.240 -3.531 DBNDD1 dysbindin (dystrobrevin binding protein 1) domain containing 1 16 -88598779, -88598779 AK022644 16q24.3 Hs.301394 5

protein binding

cytoplasm

 
203758_at 0.382 5.534 2.498 2.440e-02 0.240 -3.531 CTSO cathepsin O 4 -157064719 AV729484 4q31-q32 Hs.75262 6

cysteine-type endopeptidase activity

proteolysis

peptidase activity

Lysosome

205245_at 0.248 6.576 2.498 2.441e-02 0.240 -3.532 PARD6A par-6 partitioning defective 6 homolog alpha (C. elegans) 16 66252351 NM_016948 16q22.1 Hs.112933 30

ruffle

nucleus

cytoplasm

plasma membrane

tight junction

cell cycle

transcription factor binding

viral reproduction

Rho GTPase binding

cell junction

GTP-dependent protein binding

cell-cell junction maintenance

cell division

Endocytosis

Tight junction

52255_s_at 0.259 6.219 2.498 2.442e-02 0.240 -3.532 COL5A3 collagen, type V, alpha 3 19 -9931236 AI984221 19p13.2 Hs.235368 12

extracellular matrix structural constituent

collagen binding

extracellular region

collagen

collagen type V

cell adhesion

cell-matrix adhesion

heparin binding

collagen fibril organization

skin development

Focal adhesion

ECM-receptor interaction

228055_at 0.326 4.243 2.498 2.442e-02 0.240 -3.532 NAPSB napsin B aspartic peptidase pseudogene 19 -55528868 AI763426 19q13.33 Hs.636624 4    
201842_s_at 0.851 6.507 2.498 2.443e-02 0.240 -3.533 EFEMP1 EGF-containing fibulin-like extracellular matrix protein 1 2 -55946605, -55946605 AI826799 2p16 Hs.76224 31

calcium ion binding

protein binding

extracellular region

proteinaceous extracellular matrix

visual perception

 
212436_at -0.229 5.552 -2.498 2.444e-02 0.240 -3.533 TRIM33 tripartite motif-containing 33 1 -114736921 AI967961 1p13.1 Hs.26837 12

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

negative regulation of transcription

protein ubiquitination

ligase activity

regulation of transforming growth factor beta receptor signaling pathway

modification-dependent protein catabolic process

negative regulation of BMP signaling pathway

metal ion binding

co-SMAD binding

R-SMAD binding

 
205571_at 0.261 7.143 2.497 2.444e-02 0.240 -3.533 LIPT1 lipoyltransferase 1 2 99137849 NM_015929 2q11.2 Hs.590896 5

mitochondrion

protein modification process

lipid metabolic process

acyltransferase activity

protein lipoylation

transferase activity

Lipoic acid metabolism

Metabolic pathways

218466_at -0.255 6.675 -2.497 2.446e-02 0.240 -3.534 TBC1D17 TBC1 domain family, member 17 19 55072640 NM_024682 19q13.33 Hs.631587 7

GTPase activator activity

Rab GTPase activator activity

intracellular

regulation of Rab GTPase activity

 
203357_s_at -0.512 5.769 -2.497 2.447e-02 0.240 -3.534 CAPN7 calpain 7 3 15222736 NM_014296 3p24 Hs.631920 6

calcium-dependent cysteine-type endopeptidase activity

intracellular

nucleus

proteolysis

peptidase activity

cysteine-type peptidase activity

 
233849_s_at -0.528 6.053 -2.497 2.448e-02 0.240 -3.535 ARHGAP5 Rho GTPase activating protein 5 14 31616245 AK023014 14q12 Hs.592313 19

GTPase activity

GTPase activator activity

Rho GTPase activator activity

GTP binding

intracellular

cytoplasm

cell adhesion

signal transduction

small GTPase mediated signal transduction

Rho protein signal transduction

membrane

SH2 domain binding

Focal adhesion

Leukocyte transendothelial migration

1554334_a_at -0.711 8.170 -2.497 2.448e-02 0.240 -3.535 DNAJA4 DnaJ (Hsp40) homolog, subfamily A, member 4 15 76343541, 76344043, 76345614 BC031044 15q25.1 Hs.513053 5

protein folding

zinc ion binding

membrane

heat shock protein binding

metal ion binding

unfolded protein binding

 
1557570_a_at -0.186 2.364 -2.497 2.449e-02 0.240 -3.535 LOC285084 hypothetical protein LOC285084 2   AA416910 2q31.1 Hs.275398      
242149_at -0.513 6.084 -2.496 2.450e-02 0.240 -3.535 C18orf19 chromosome 18 open reading frame 19 18 -13653345 R02709 18p11.21 Hs.13034 3

membrane

integral to membrane

 
204589_at 0.416 7.466 2.496 2.450e-02 0.240 -3.535 NUAK1 NUAK family, SNF1-like kinase, 1 12 -104981254 NM_014840 12q23.3 Hs.719171 13

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

transferase activity

 
204059_s_at 0.474 9.227 2.496 2.450e-02 0.240 -3.535 ME1 malic enzyme 1, NADP(+)-dependent, cytosolic 6 -83976828 NM_002395 6q12 Hs.21160 24

malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity

malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity

binding

nucleus

nucleolus

cytoplasm

cytosol

carbohydrate metabolic process

malate metabolic process

NADP biosynthetic process

electron carrier activity

response to hormone stimulus

response to carbohydrate stimulus

oxidoreductase activity

manganese ion binding

ADP binding

metal ion binding

NADP or NADPH binding

NAD or NADH binding

oxidation reduction

Pyruvate metabolism

Carbon fixation in photosynthetic organisms

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Metabolic pathways

PPAR signaling pathway

205647_at -0.411 5.376 -2.496 2.450e-02 0.240 -3.535 RAD52 RAD52 homolog (S. cerevisiae) 12 -891515 NM_002879 12p13-p12.2 Hs.709202 57

double-strand break repair via homologous recombination

DNA binding

protein binding

nucleus

nucleoplasm

mitotic recombination

response to DNA damage stimulus

reciprocal meiotic recombination

Homologous recombination

209501_at 0.315 5.858 2.496 2.450e-02 0.240 -3.535 CDR2 cerebellar degeneration-related protein 2, 62kDa 16 -22264757 AL582414 16p12.3 Hs.513430 14

molecular_function

protein binding

nucleus

cytoplasm

 
202363_at 0.685 6.012 2.496 2.451e-02 0.240 -3.536 SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 5 -136338885 AF231124 5q31 Hs.643338 15

calcium ion binding

extracellular region

proteinaceous extracellular matrix

cell motion

cell adhesion

signal transduction

multicellular organismal development

nervous system development

cell proliferation

 
227429_at 0.241 5.984 2.496 2.451e-02 0.240 -3.536 EFCAB4A EF-hand calcium binding domain 4A 11 817584 AI683694 11p15.5 Hs.660936 Hs.708975 4

calcium ion binding

 
205600_x_at 0.310 5.285 2.496 2.451e-02 0.240 -3.536 HOXB5 homeobox B5 17 -44023617 AI052747 17q21.3 Hs.654456 25

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anatomical structure morphogenesis

anterior/posterior pattern formation

sequence-specific DNA binding

endothelial cell differentiation

embryonic skeletal system morphogenesis

 
205463_s_at -0.603 6.096 -2.496 2.452e-02 0.240 -3.536 PDGFA platelet-derived growth factor alpha polypeptide 7 -503424 NM_002607 7p22 Hs.535898 79

cell activation

platelet-derived growth factor receptor binding

platelet-derived growth factor receptor binding

collagen binding

extracellular region

extracellular region

extracellular space

cell-cell signaling

growth factor activity

embryonic development

cell surface

negative regulation of phosphatidylinositol biosynthetic process

negative regulation of platelet activation

regulation of smooth muscle cell migration

membrane

positive regulation of cell migration

platelet dense granule lumen

regulation of actin cytoskeleton organization

wound healing

protein homodimerization activity

cell surface binding

positive regulation of DNA replication

protein heterodimerization activity

platelet-derived growth factor receptor signaling pathway

positive regulation of fibroblast proliferation

platelet-derived growth factor binding

negative chemotaxis

MAPK signaling pathway

Cytokine-cytokine receptor interaction

Focal adhesion

Gap junction

Regulation of actin cytoskeleton

Pathways in cancer

Glioma

Prostate cancer

Melanoma

215990_s_at -0.932 6.554 -2.496 2.453e-02 0.240 -3.536 BCL6 B-cell CLL/lymphoma 6 3 -188921858, -188921858, -188921858 S67779 3q27 Hs.478588 139

protein import into nucleus, translocation

negative regulation of transcription from RNA polymerase II promoter

cell morphogenesis

negative regulation of cell-matrix adhesion

regulation of germinal center formation

negative regulation of T-helper 2 type immune response

negative regulation of B cell apoptosis

transcription factor activity

protein binding

intracellular

nucleus

replication fork

response to DNA damage stimulus

spermatogenesis

protein localization

zinc ion binding

negative regulation of cell proliferation

transcription repressor activity

transcription repressor activity

actin cytoskeleton organization

B cell differentiation

negative regulation of cell growth

positive regulation of B cell proliferation

chromatin DNA binding

regulation of Rho GTPase activity

negative regulation of mast cell cytokine production

negative regulation of Rho protein signal transduction

positive regulation of apoptosis

negative regulation of apoptosis

regulation of memory T cell differentiation

sequence-specific DNA binding

regulation of transcription

negative regulation of cell differentiation

negative regulation of T-helper 2 cell differentiation

negative regulation of S phase of mitotic cell cycle

metal ion binding

negative regulation of isotype switching to IgE isotypes

erythrocyte development

regulation of inflammatory response

positive regulation of cell motion

 
1554589_at 0.291 4.740 2.496 2.454e-02 0.240 -3.537 LENG9 leukocyte receptor cluster (LRC) member 9 19 -59664790 BC015921 19q13.4 Hs.590976 3

nucleic acid binding

catalytic activity

intracellular

zinc ion binding

RNA metabolic process

metal ion binding

 
229340_at -0.233 5.796 -2.495 2.456e-02 0.240 -3.537 NKAPL NFKB activating protein-like 6 28335076 BF592882 6p22.1 Hs.239181 3    
202288_at -0.209 5.971 -2.495 2.457e-02 0.241 -3.538 MTOR mechanistic target of rapamycin (serine/threonine kinase) 1 -11089175 U88966 1p36.2 Hs.338207 317

nucleotide binding

protein serine/threonine kinase activity

protein serine/threonine kinase activity

ATP binding

cytoplasm

mitochondrion

mitochondrial outer membrane

endoplasmic reticulum

Golgi apparatus

cytosol

phosphoinositide 3-kinase complex

signal transduction

response to nutrient

endomembrane system

membrane

cell growth

kinase activity

phosphotransferase activity, alcohol group as acceptor

protein catabolic process

TOR signaling pathway

TORC1 complex

TORC2 complex

regulation of actin cytoskeleton organization

response to amino acid stimulus

protein amino acid autophosphorylation

phosphoprotein binding

ErbB signaling pathway

mTOR signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

Type II diabetes mellitus

Pathways in cancer

Glioma

Prostate cancer

Acute myeloid leukemia

214705_at -0.740 4.385 -2.495 2.458e-02 0.241 -3.538 INADL InaD-like (Drosophila) 1 61980736 AJ001306 1p31.3 Hs.478125 24

protein binding

cellular_component

plasma membrane

tight junction

intracellular signaling cascade

apical plasma membrane

cell junction

Tight junction

203808_at 0.188 3.646 2.494 2.459e-02 0.241 -3.538 AKT2 v-akt murine thymoma viral oncogene homolog 2 19 -45428063 M95936 19q13.1-q13.2 Hs.631535 110

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytosol

protein modification process

protein amino acid phosphorylation

insulin receptor signaling pathway

negative regulation of plasma membrane long-chain fatty acid transport

positive regulation of glucose metabolic process

transferase activity

positive regulation of fatty acid beta-oxidation

positive regulation of glycogen biosynthetic process

positive regulation of glucose import

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

mTOR signaling pathway

Apoptosis

VEGF signaling pathway

Focal adhesion

Tight junction

Toll-like receptor signaling pathway

Jak-STAT signaling pathway

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Neurotrophin signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Chronic myeloid leukemia

Acute myeloid leukemia

Small cell lung cancer

Non-small cell lung cancer

229235_at -0.368 7.659 -2.494 2.459e-02 0.241 -3.538 ZCCHC11 zinc finger, CCHC domain containing 11 1 -52661535 AI983432 1p32.3 Hs.655407 7

nucleic acid binding

protein binding

intracellular

nucleus

cytoplasm

zinc ion binding

nucleotidyltransferase activity

metal ion binding

 
210321_at 0.309 4.655 2.494 2.460e-02 0.241 -3.539 GZMH granzyme H (cathepsin G-like 2, protein h-CCPX) 14 -24145532 M36118 14q11.2 Hs.348264 17

serine-type endopeptidase activity

cytoplasm

proteolysis

apoptosis

peptidase activity

cytolysis

 
205399_at 0.452 5.463 2.494 2.461e-02 0.241 -3.539 DCLK1 doublecortin-like kinase 1 13 -35241122 NM_004734 13q13 Hs.507755 Hs.717124 15

nucleotide binding

protein serine/threonine kinase activity

receptor signaling protein activity

protein binding

ATP binding

integral to plasma membrane

protein amino acid phosphorylation

intracellular signaling cascade

multicellular organismal development

central nervous system development

endosome transport

transferase activity

cell differentiation

 
224057_s_at 0.365 8.536 2.494 2.461e-02 0.241 -3.539 THAP4 THAP domain containing 4 2 -242172492, -1615 BC000767 2q37.3 Hs.435759 Hs.645463 9

DNA binding

zinc ion binding

metal ion binding

 
1558346_at -0.258 4.244 -2.494 2.461e-02 0.241 -3.539 COX17 COX17 cytochrome c oxidase assembly homolog (S. cerevisiae) 3 -120871061 BG535811 3q13.33 Hs.534383 19

cytoplasm

mitochondrion

mitochondrial intermembrane space

generation of precursor metabolites and energy

copper ion transport

copper chaperone activity

metal ion binding

Oxidative phosphorylation

Metabolic pathways

214647_s_at 0.190 3.693 2.494 2.462e-02 0.241 -3.540 HFE hemochromatosis 6 26195487 BG402460 6p21.3 Hs.233325 592

antigen processing and presentation of peptide antigen via MHC class I

iron ion binding

protein binding

cytoplasm

early endosome

plasma membrane

integral to plasma membrane

protein complex assembly

ion transport

iron ion transport

cellular iron ion homeostasis

receptor-mediated endocytosis

immune response

antigen processing and presentation

cytoplasmic vesicle

MHC class I protein complex

apical part of cell

basal part of cell

perinuclear region of cytoplasm

recycling endosome

 
238222_at 0.242 4.341 2.494 2.462e-02 0.241 -3.540 GKN2 gastrokine 2 2 -69025867 AI821357 2p13.3 Hs.16757 8

extracellular region

 
220373_at 0.242 3.647 2.494 2.463e-02 0.241 -3.540 DCHS2 dachsous 2 (Drosophila) 4 -155627044, -155463255, -155374976 NM_017639 4q31.3 Hs.655664 Hs.712046 6

calcium ion binding

protein binding

cell adhesion

homophilic cell adhesion

membrane

integral to membrane

 
224974_at -0.396 5.141 -2.494 2.463e-02 0.241 -3.540 SUDS3 suppressor of defective silencing 3 homolog (S. cerevisiae) 12 117298740 AK024460 12q24.23 Hs.416630 Hs.602312 9

protein binding

negative regulation of transcription

chromatin modification

Sin3 complex

histone deacetylase binding

 
203680_at 0.616 5.599 2.493 2.465e-02 0.241 -3.541 PRKAR2B protein kinase, cAMP-dependent, regulatory, type II, beta 7 106472413 NM_002736 7q22 Hs.433068 48

nucleotide binding

regulation of protein amino acid phosphorylation

cAMP-dependent protein kinase complex

fatty acid metabolic process

learning

cAMP-dependent protein kinase regulator activity

hormone-mediated signaling

cAMP binding

Apoptosis

Insulin signaling pathway

202074_s_at -0.388 11.092 -2.493 2.466e-02 0.241 -3.541 OPTN optineurin 10 13182087 NM_021980 10p13 Hs.332706 65

protein targeting to Golgi

cytoplasm

Golgi apparatus

Golgi organization

signal transduction

protein C-terminus binding

cell death

cellular protein localization

Golgi to plasma membrane protein transport

perinuclear region of cytoplasm

 
218910_at 0.207 5.975 2.493 2.466e-02 0.241 -3.541 ANO10 anoctamin 10 3 -43382821 NM_018075 3p22.1 Hs.656657 3

ion channel activity

chloride channel activity

calcium ion binding

ion transport

membrane

integral to membrane

chloride ion binding

chloride channel complex

 
221322_at 0.203 2.626 2.493 2.466e-02 0.241 -3.541 NPVF neuropeptide VF precursor 7 -25230715 NM_022150 7p21-p15 Hs.60473 8

G-protein coupled receptor activity

protein binding

extracellular region

neuropeptide signaling pathway

membrane

 
204243_at -0.246 6.562 -2.493 2.467e-02 0.241 -3.541 RLF rearranged L-myc fusion 1 40399627 NM_012421 1p32 Hs.205627 10

transcription factor activity

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
218404_at 0.442 4.568 2.493 2.468e-02 0.241 -3.542 SNX10 sorting nexin 10 7 26298039 NM_013322 7p15.2 Hs.719227 6

protein binding

cell communication

protein transport

phosphoinositide binding

 
211807_x_at 0.204 5.114 2.493 2.468e-02 0.241 -3.542 PCDHGB5 protocadherin gamma subfamily B, 5 5 140757878, 140757878 AF152521 5q31 Hs.368160 6

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

 
202210_x_at 0.188 6.828 2.492 2.469e-02 0.241 -3.542 GSK3A glycogen synthase kinase 3 alpha 19 -47426177 NM_019884 19q13.2 Hs.466828 52

nucleotide binding

glycogen synthase kinase 3 activity

protein binding

ATP binding

cytosol

cytosol

protein amino acid phosphorylation

negative regulation of UDP-glucose catabolic process

transferase activity

protein kinase A catalytic subunit binding

negative regulation of glucose import

negative regulation of insulin receptor signaling pathway

tau-protein kinase activity

negative regulation of transferase activity

Chemokine signaling pathway

208671_at -0.414 9.911 -2.492 2.469e-02 0.241 -3.542 SERINC1 serine incorporator 1 6 -122806191 AF164794 6q22.31 Hs.146668 9

endoplasmic reticulum

endoplasmic reticulum membrane

plasma membrane

lipid metabolic process

phosphatidylserine metabolic process

sphingolipid metabolic process

phospholipid biosynthetic process

L-serine transmembrane transporter activity

L-serine transport

integral to membrane

positive regulation of transferase activity

 
211946_s_at -0.269 8.838 -2.492 2.469e-02 0.241 -3.542 BAT2D1 BAT2 domain containing 1 1 169721289 AL096857 1q23.3 Hs.494614 5    
228143_at 0.332 3.294 2.492 2.470e-02 0.241 -3.543 CP ceruloplasmin (ferroxidase) 3 -150372979 AI684991 3q23-q25 Hs.558314 95

ferroxidase activity

copper ion binding

extracellular region

extracellular space

ion transport

copper ion transport

cellular iron ion homeostasis

aging

response to nutrient

oxidoreductase activity

anchored to plasma membrane

metal ion binding

oxidation reduction

Porphyrin and chlorophyll metabolism

208147_s_at 0.265 2.458 2.492 2.471e-02 0.241 -3.543 CYP2C8 cytochrome P450, family 2, subfamily C, polypeptide 8 10 -96786518 NM_030878 10q23.33 Hs.709188 97

monooxygenase activity

endoplasmic reticulum

microsome

electron carrier activity

membrane

heme binding

metal ion binding

oxidation reduction

aromatase activity

Arachidonic acid metabolism

Linoleic acid metabolism

Retinol metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

Metabolic pathways

214515_at 0.233 4.024 2.492 2.471e-02 0.241 -3.543 OR1E1 olfactory receptor, family 1, subfamily E, member 1 17 -3247509 NM_003553 17p13.3 Hs.278485 7

receptor activity

olfactory receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

sensory perception of smell

integral to membrane

response to stimulus

Olfactory transduction

221166_at 0.212 4.274 2.492 2.472e-02 0.241 -3.543 FGF23 fibroblast growth factor 23 12 -4347653 NM_020638 12p13.3 Hs.287370 83

extracellular region

extracellular region

extracellular space

growth factor activity

fibroblast growth factor receptor signaling pathway

cell differentiation

regulation of bone mineralization

cellular phosphate ion homeostasis

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

230745_s_at 0.301 5.237 2.492 2.473e-02 0.241 -3.544 TOX3 TOX high mobility group box family member 3 16 -51029418, -51029418 AI347147 16q12.1 Hs.460789 11

DNA binding

nucleus

 
223448_x_at 0.265 8.616 2.491 2.477e-02 0.241 -3.545 MRPS22 mitochondrial ribosomal protein S22 3 140545550 AF063603 3q23 Hs.75724 13

molecular_function

structural constituent of ribosome

protein binding

mitochondrion

mitochondrial small ribosomal subunit

ribosome

biological_process

 
219815_at 0.241 5.564 2.490 2.478e-02 0.241 -3.546 GAL3ST4 galactose-3-O-sulfotransferase 4 7 -99594800 NM_024637 7q22.1 Hs.44856 10

galactosylceramide sulfotransferase activity

membrane fraction

Golgi apparatus

sulfur metabolic process

cell-cell signaling

biosynthetic process

glycoprotein metabolic process

oligosaccharide metabolic process

membrane

integral to membrane

transferase activity

proteoglycan biosynthetic process

3'-phosphoadenosine 5'-phosphosulfate binding

proteoglycan sulfotransferase activity

 
202628_s_at 0.271 3.944 2.490 2.482e-02 0.241 -3.547 SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 7 100557098 NM_000602 7q21.3-q22 Hs.414795 Hs.713079 700

chronological cell aging

protease binding

serine-type endopeptidase activity

serine-type endopeptidase inhibitor activity

serine-type endopeptidase inhibitor activity

protein binding

extracellular region

extracellular region

plasma membrane

blood coagulation

peptidase inhibitor activity

regulation of cell proliferation

fibrinolysis

regulation of angiogenesis

p53 signaling pathway

Complement and coagulation cascades

220019_s_at 0.226 4.089 2.490 2.483e-02 0.241 -3.547 ZNF224 zinc finger protein 224 19 49290336 NM_005774 19q13.2 Hs.585869 10

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
229312_s_at -0.465 8.507 -2.490 2.483e-02 0.241 -3.547 GKAP1 G kinase anchoring protein 1 9 -85544156 BF434321 9q21.32 Hs.522255 5

protein binding

Golgi apparatus

signal transduction

 
211475_s_at 0.337 9.594 2.489 2.484e-02 0.241 -3.547 BAG1 BCL2-associated athanogene 9 -33242469 AF116273 9p12 Hs.377484 78

receptor signaling protein activity

protein binding

nucleus

cytoplasm

cytoskeleton

apoptosis

anti-apoptosis

cell surface receptor linked signal transduction

 
237091_at 0.329 4.275 2.489 2.484e-02 0.241 -3.548 TBC1D9 TBC1 domain family, member 9 (with GRAM domain) 4 -141761385 AW138788 4q31.21 Hs.480819 11

GTPase activator activity

Rab GTPase activator activity

calcium ion binding

intracellular

regulation of Rab GTPase activity

 
207585_s_at -0.361 9.646 -2.489 2.484e-02 0.241 -3.548 RPL36AL ribosomal protein L36a-like 14 -49155156 NM_001001 14q21 Hs.444749 7

structural constituent of ribosome

intracellular

cytoplasm

ribosome

translation

Ribosome

201643_x_at -0.234 8.231 -2.489 2.484e-02 0.241 -3.548 KDM3B lysine (K)-specific demethylase 3B 5 137716183 NM_016604 5q31 Hs.714832 14

iron ion binding

nucleus

nucleolus

zinc ion binding

oxidoreductase activity

chromatin modification

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

regulation of transcription

metal ion binding

oxidation reduction

 
200014_s_at -0.356 9.034 -2.489 2.486e-02 0.242 -3.548 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 14 -20747135 NM_004500 14q11.2 Hs.508848 51

nucleotide binding

nuclear mRNA splicing, via spliceosome

nuclear mRNA splicing, via spliceosome

RNA binding

nucleus

spliceosomal complex

RNA splicing

identical protein binding

 
213513_x_at -0.367 10.004 -2.489 2.488e-02 0.242 -3.549 ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa 2 218790118, 218790364 BG034239 2q36.1 Hs.529303 23

actin binding

structural constituent of cytoskeleton

protein binding

cytoplasm

Golgi apparatus

Arp2/3 protein complex

focal adhesion

cell motion

positive regulation of actin filament polymerization

cell leading edge

cell projection

Fc gamma R-mediated phagocytosis

Regulation of actin cytoskeleton

213122_at -0.398 7.874 -2.488 2.489e-02 0.242 -3.549 TSPYL5 TSPY-like 5 8 -98354889 AI096375 8q22.1 Hs.173094 4

nucleus

nucleosome assembly

 
211276_at 0.234 3.057 2.488 2.489e-02 0.242 -3.549 TCEAL2 transcription elongation factor A (SII)-like 2 X 101267315 AF063606 Xq22.1-q22.3 Hs.401835 6

nucleus

regulation of transcription

 
208089_s_at -0.420 5.503 -2.488 2.490e-02 0.242 -3.550 TDRD3 tudor domain containing 3 13 59868591, 59869427 NM_030794 13q21.2 Hs.525061 12

nucleic acid binding

nucleus

cytoplasm

 
217987_at -0.369 8.972 -2.488 2.491e-02 0.242 -3.550 ASNSD1 asparagine synthetase domain containing 1 2 190234369 NM_019048 2p24.3-q21.3 Hs.101364 3

asparagine synthase (glutamine-hydrolyzing) activity

asparagine biosynthetic process

glutamine metabolic process

cellular amino acid biosynthetic process

 
216395_at 0.207 4.850 2.488 2.492e-02 0.242 -3.550 FBXL18 F-box and leucine-rich repeat protein 18 7 -5481953 AL137434 7p22.2 Hs.623974 Hs.706587 5

modification-dependent protein catabolic process

 
219243_at 0.470 6.319 2.488 2.492e-02 0.242 -3.550 GIMAP4 GTPase, IMAP family member 4 7 149895390 NM_018326 7q36.1 Hs.647101 Hs.648582 11

nucleotide binding

GTP binding

 
239047_at 0.238 4.039 2.487 2.494e-02 0.242 -3.551 FAM122C family with sequence similarity 122C X 133768889 AW028188 Xq26.3 Hs.269127 3    
205190_at -0.391 4.379 -2.487 2.495e-02 0.242 -3.552 PLS1 plastin 1 (I isoform) 3 143797918, 143824955 NM_002670 3q23 Hs.203637 10

structural constituent of cytoskeleton

calcium ion binding

cytoplasm

actin filament binding

 
201783_s_at -0.220 6.860 -2.487 2.495e-02 0.242 -3.552 RELA v-rel reticuloendotheliosis viral oncogene homolog A (avian) 11 -65177643 NM_021975 11q13 Hs.502875 425

liver development

hair follicle development

RNA polymerase II transcription factor activity, enhancer binding

nucleus

nucleoplasm

transcription factor complex

cytoplasm

cytosol

anti-apoptosis

inflammatory response

cellular defense response

organ morphogenesis

response to organic substance

response to UV-B

cytokine-mediated signaling pathway

protein kinase binding

transcription activator binding

negative regulation of protein catabolic process

phosphate binding

identical protein binding

positive regulation of I-kappaB kinase/NF-kappaB cascade

interspecies interaction between organisms

positive regulation of interleukin-12 biosynthetic process

positive regulation of transcription from RNA polymerase II promoter

protein N-terminus binding

NF-kappaB binding

positive regulation of NF-kappaB transcription factor activity

defense response to virus

transcription repressor binding

response to interleukin-1

MAPK signaling pathway

Chemokine signaling pathway

Apoptosis

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

T cell receptor signaling pathway

B cell receptor signaling pathway

Neurotrophin signaling pathway

Adipocytokine signaling pathway

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Pancreatic cancer

Prostate cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Small cell lung cancer

237044_s_at 0.294 5.463 2.487 2.495e-02 0.242 -3.552 C10orf41 chromosome 10 open reading frame 41 10 76831291, 76833519 AI480142 10q22.2 Hs.534598 Hs.599628 4    
203456_at 0.255 5.233 2.487 2.497e-02 0.242 -3.552 PRAF2 PRA1 domain family, member 2 X -48815761 NM_007213 Xp11.23 Hs.29595 7

endosome

protein transport

L-glutamate transport

membrane

integral to membrane

 
1569293_x_at -0.183 6.258 -2.486 2.499e-02 0.242 -3.553 CROCCL1 ciliary rootlet coiled-coil, rootletin-like 1 1 -16817339 BC015342 1p36.13 Hs.631865 2    
217822_at -0.280 8.198 -2.486 2.499e-02 0.242 -3.553 WBP11 WW domain binding protein 11 12 -14830678 NM_016312 12p12.3 Hs.655138 13

single-stranded DNA binding

protein binding

nucleus

cytoplasm

rRNA processing

mRNA processing

RNA splicing

protein phosphatase type 1 regulator activity

nuclear speck

 
202599_s_at -0.650 8.694 -2.486 2.500e-02 0.242 -3.553 NRIP1 nuclear receptor interacting protein 1 21 -15255426 NM_003489 21q11.2 Hs.155017 47

histone deacetylase complex

negative regulation of transcription from RNA polymerase II promoter

ovarian follicle rupture

transcription coactivator activity

transcription coactivator activity

transcription corepressor activity

receptor binding

nucleus

lipid storage

estrogen receptor binding

androgen receptor signaling pathway

ovulation

nuclear hormone receptor binding

glucocorticoid receptor binding

histone deacetylase binding

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

retinoid X receptor binding

androgen receptor binding

 
216708_x_at 0.307 3.339 2.486 2.500e-02 0.242 -3.553 IGL@ immunoglobulin lambda locus 22   D84143 22q11.1-q11.2 Hs.449585 Hs.561078 20    
223828_s_at 0.216 3.883 2.486 2.500e-02 0.242 -3.553 LGALS12 lectin, galactoside-binding, soluble, 12 11 63030099, 63032034 AF222694 11q13 Hs.502774 5

sugar binding

nucleus

mitochondrion

apoptosis

induction of apoptosis by intracellular signals

lactose binding

 
229058_at 0.278 5.607 2.486 2.502e-02 0.242 -3.554 ANKRD16 ankyrin repeat domain 16 10 -5960056, -5943696 AI826110 10p15.1 Hs.289828 4    
202541_at -0.373 7.896 -2.486 2.502e-02 0.242 -3.554 AIMP1 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 4 107456215, 107456301, 107457112 BF589679 4q24 Hs.591680 35

tRNA binding

negative regulation of endothelial cell proliferation

cytokine activity

extracellular region

extracellular space

nucleus

endoplasmic reticulum

Golgi apparatus

cytosol

tRNA aminoacylation for protein translation

chemotaxis

inflammatory response

signal transduction

cell-cell signaling

aminoacyl-tRNA synthetase multienzyme complex

secretory granule

protein homodimerization activity

cell surface binding

leukocyte migration

 
228968_at 0.206 6.053 2.485 2.504e-02 0.242 -3.555 ZNF449 zinc finger protein 449 X 134306361 AI888786 Xq26.3 Hs.28780 7

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
240325_x_at 0.250 5.390 2.485 2.504e-02 0.242 -3.555 LOC442142 hypothetical LOC442142 5   AI953040 5q33.3        
221527_s_at -0.486 7.473 -2.485 2.504e-02 0.242 -3.555 PARD3 par-3 partitioning defective 3 homolog (C. elegans) 10 -34440102 AF196185 10p11.21 Hs.131489 40

protein binding

cytoplasm

plasma membrane

tight junction

tight junction

cell cortex

protein complex assembly

cell cycle

establishment or maintenance of cell polarity

activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway

axonogenesis

asymmetric cell division

cell junction

Chemokine signaling pathway

Neuroactive ligand-receptor interaction

Endocytosis

Adherens junction

Tight junction

214357_at 0.722 5.129 2.485 2.505e-02 0.242 -3.555 C1orf105 chromosome 1 open reading frame 105 1 170656452 AL035295 1q24.3 Hs.517991 4    
225364_at 0.248 5.872 2.485 2.505e-02 0.242 -3.555 STK4 serine/threonine kinase 4 20 43028533 BE222274 20q11.2-q13.2 Hs.472838 38

nucleotide binding

magnesium ion binding

cell morphogenesis

protein serine/threonine kinase activity

ATP binding

nucleus

cytoplasm

signal transduction

protein kinase cascade

transcription factor binding

transferase activity

peptidyl-serine phosphorylation

protein homodimerization activity

positive regulation of apoptosis

protein amino acid autophosphorylation

MAPK signaling pathway

Pathways in cancer

Non-small cell lung cancer

211980_at 0.540 9.054 2.485 2.505e-02 0.242 -3.555 COL4A1 collagen, type IV, alpha 1 13 -109599310 AI922605 13q34 Hs.17441 83

extracellular matrix structural constituent

binding

extracellular region

collagen

collagen type IV

Focal adhesion

ECM-receptor interaction

Pathways in cancer

Small cell lung cancer

202147_s_at -0.633 7.163 -2.485 2.506e-02 0.242 -3.555 IFRD1 interferon-related developmental regulator 1 7 111850461, 111877750 NM_001550 7q22-q31 Hs.7879 23

binding

nucleus

multicellular organismal development

myoblast cell fate determination

adult somatic muscle development

muscle cell differentiation

 
216178_x_at -0.601 7.325 -2.485 2.506e-02 0.242 -3.556 ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 10 -33236244, -33229251, -33229251, -33229251 AA215854 10p11.2 Hs.643813 512

G1/S transition of mitotic cell cycle

in utero embryonic development

cell fate specification

receptor activity

integrin binding

focal adhesion

cellular defense response

cell adhesion

homophilic cell adhesion

leukocyte adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

positive regulation of cell proliferation

integrin complex

germ cell migration

cell surface

integral to membrane

synaptosome

B cell differentiation

neuromuscular junction

ruffle membrane

cell-cell adhesion mediated by integrin

sarcolemma

melanosome

identical protein binding

interspecies interaction between organisms

sarcomere organization

negative regulation of cell differentiation

protein heterodimerization activity

regulation of cell cycle

cardiac muscle cell differentiation

Axon guidance

Focal adhesion

ECM-receptor interaction

Cell adhesion molecules (CAMs)

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Pathogenic Escherichia coli infection - EHEC

Pathways in cancer

Small cell lung cancer

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

227007_at 0.382 4.439 2.485 2.508e-02 0.242 -3.556 TMCO4 transmembrane and coiled-coil domains 4 1 -19881292 AI972419 1p36.13 Hs.656313 2

membrane

integral to membrane

 
227447_at -0.358 7.743 -2.484 2.511e-02 0.242 -3.557 SKIV2L2 superkiller viralicidic activity 2-like 2 (S. cerevisiae) 5 54639332 AA525163 5q11.2 Hs.274531 19

nucleotide binding

nucleic acid binding

helicase activity

protein binding

ATP binding

nucleus

spliceosomal complex

nucleolus

mRNA processing

ATP-dependent helicase activity

RNA splicing

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

RNA degradation

221400_at 0.242 3.922 2.484 2.511e-02 0.242 -3.557 MYO3A myosin IIIA 10 26263007 NM_017433 10p11.1 Hs.662630 14

nucleotide binding

actin binding

protein serine/threonine kinase activity

calmodulin binding

ATP binding

cytoplasm

cytoskeleton

visual perception

sensory perception of sound

myosin complex

transferase activity

filopodium

actin-dependent ATPase activity

filamentous actin

ADP binding

protein amino acid autophosphorylation

response to stimulus

plus-end directed microfilament motor activity

 
234672_s_at -0.310 6.097 -2.484 2.512e-02 0.242 -3.557 TMEM48 transmembrane protein 48 1 -54005975 AL354612 1p32.3 Hs.476525 10

nucleus

nuclear pore

protein transport

membrane

integral to membrane

structural constituent of nuclear pore

nuclear pore distribution

mRNA transport

nuclear pore complex assembly

intracellular protein transmembrane transport

 
226899_at 0.610 5.673 2.484 2.513e-02 0.242 -3.558 UNC5B unc-5 homolog B (C. elegans) 10 72642303 AK022859 10q22.1 Hs.522997 12

receptor activity

protein binding

apoptosis

signal transduction

multicellular organismal development

membrane

integral to membrane

Axon guidance

216899_s_at 0.571 5.060 2.484 2.513e-02 0.242 -3.558 SKAP2 src kinase associated phosphoprotein 2 7 -26673212 AC003999 7p21-p15 Hs.200770 Hs.644804 19

SH3/SH2 adaptor activity

cytoplasm

plasma membrane

protein complex assembly

signal transduction

negative regulation of cell proliferation

B cell activation

 
204831_at -0.404 6.772 -2.483 2.513e-02 0.242 -3.558 CDK8 cyclin-dependent kinase 8 13 25726755 R59697 13q12 Hs.382306 38

nucleotide binding

cyclin-dependent protein kinase activity

protein binding

ATP binding

nucleus

protein amino acid phosphorylation

RNA polymerase II carboxy-terminal domain kinase activity

transferase activity

regulation of transcription

 
229230_at 0.193 3.513 2.483 2.513e-02 0.242 -3.558 OSTalpha organic solute transporter alpha 3 197427779 AA702685 3q29 Hs.630585 11

transporter activity

plasma membrane

transport

integral to membrane

 
211474_s_at 0.271 8.997 2.483 2.516e-02 0.242 -3.559 SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6 6 -2893391 BC004948 6p25 Hs.519523 21

serine-type endopeptidase inhibitor activity

protein binding

cytoplasm

cytosol

peptidase inhibitor activity

 
218625_at 0.398 6.380 2.483 2.517e-02 0.242 -3.559 NRN1 neuritin 1 6 -5943231 NM_016588 6p25.1 Hs.103291 7

plasma membrane

anchored to membrane

 
209419_at 0.169 3.388 2.482 2.518e-02 0.242 -3.560 THOC5 THO complex 5 22 -28234155, -28234155 AB023200 22q12.2 Hs.75361 18

protein binding

nucleus

cytoplasm

cell differentiation

negative regulation of macrophage differentiation

 
244345_at 0.221 2.913 2.482 2.518e-02 0.242 -3.560 CADM1 cell adhesion molecule 1 11 -114549554 AI627453 11q23.2 Hs.370510 50

T cell mediated cytotoxicity

receptor binding

receptor binding

plasma membrane

cell-cell junction

apoptosis

immune response

cell adhesion

homophilic cell adhesion

heterophilic cell adhesion

multicellular organismal development

spermatogenesis

protein C-terminus binding

cell recognition

cell recognition

integral to membrane

basolateral plasma membrane

cell differentiation

PDZ domain binding

susceptibility to natural killer cell mediated cytotoxicity

susceptibility to natural killer cell mediated cytotoxicity

protein homodimerization activity

positive regulation of cytokine secretion

activated T cell proliferation

detection of stimulus

detection of stimulus

Cell adhesion molecules (CAMs)

218108_at -0.270 6.381 -2.482 2.520e-02 0.243 -3.560 UBR7 ubiquitin protein ligase E3 component n-recognin 7 (putative) 14 92743153 NM_018108 14q32.12 Hs.648806 7

molecular_function

ubiquitin-protein ligase activity

protein binding

biological_process

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
234452_at 0.226 5.231 2.482 2.521e-02 0.243 -3.561 HIBADH 3-hydroxyisobutyrate dehydrogenase 7 -27531585 AK025558 7p15.2 Hs.406758 9

phosphogluconate dehydrogenase (decarboxylating) activity

binding

mitochondrion

pentose-phosphate shunt

valine metabolic process

3-hydroxyisobutyrate dehydrogenase activity

oxidoreductase activity

NAD or NADH binding

oxidation reduction

Valine, leucine and isoleucine degradation

Metabolic pathways

223432_at 0.294 5.329 2.482 2.522e-02 0.243 -3.561 OSBP2 oxysterol binding protein 2 22 29420792 BE501253 22q12.2 Hs.517546 11

lipid transport

steroid metabolic process

membrane

 
219307_at 0.355 6.491 2.482 2.522e-02 0.243 -3.561 PDSS2 prenyl (decaprenyl) diphosphate synthase, subunit 2 6 -107580453 NM_020381 6q21 Hs.718509 9

trans-hexaprenyltranstransferase activity

ubiquinone biosynthetic process

isoprenoid biosynthetic process

transferase activity

protein heterodimerization activity

Terpenoid backbone biosynthesis

203857_s_at 0.322 5.307 2.482 2.523e-02 0.243 -3.561 PDIA5 protein disulfide isomerase family A, member 5 3 124268654 NM_006810 3q21.1 Hs.477352 9

protein disulfide isomerase activity

endoplasmic reticulum

endoplasmic reticulum lumen

protein folding

response to stress

oxidoreductase activity

isomerase activity

cell redox homeostasis

oxidation reduction

 
202957_at 0.398 4.313 2.481 2.524e-02 0.243 -3.562 HCLS1 hematopoietic cell-specific Lyn substrate 1 3 -122832935 NM_005335 3q13 Hs.14601 33

transcription factor activity

protein binding

nucleus

DNA-directed RNA polymerase II, core complex

cytoplasm

mitochondrion

regulation of transcription, DNA-dependent

intracellular signaling cascade

positive regulation of cell proliferation

response to hormone stimulus

membrane

SH3 domain binding

erythrocyte differentiation

positive regulation of tyrosine phosphorylation of STAT protein

Tight junction

Pathogenic Escherichia coli infection - EHEC

201087_at -0.267 7.223 -2.481 2.526e-02 0.243 -3.562 PXN paxillin 12 -119132632, -119132632 NM_002859 12q24.31 Hs.446336 140

protein binding

cytoplasm

cytoskeleton

microtubule associated complex

plasma membrane

focal adhesion

cell adhesion

cell-matrix adhesion

signal transduction

signal complex assembly

zinc ion binding

vinculin binding

lamellipodium

cell junction

cellular response to reactive oxygen species

metal ion binding

Chemokine signaling pathway

VEGF signaling pathway

Focal adhesion

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

209731_at 0.246 5.702 2.481 2.526e-02 0.243 -3.563 NTHL1 nth endonuclease III-like 1 (E. coli) 16 -2029816 U79718 16p13.3 Hs.66196 32

oxidized pyrimidine base lesion DNA N-glycosylase activity

DNA binding

double-stranded DNA binding

endonuclease activity

iron ion binding

protein binding

intracellular

nucleus

nucleoplasm

mitochondrion

nucleotide-excision repair, DNA incision, 5'-to lesion

response to DNA damage stimulus

metabolic process

hydrolase activity, acting on glycosyl bonds

lyase activity

DNA N-glycosylase activity

depyrimidination

metal ion binding

4 iron, 4 sulfur cluster binding

Base excision repair

227522_at -0.710 10.442 -2.481 2.527e-02 0.243 -3.563 CMBL carboxymethylenebutenolidase homolog (Pseudomonas) 5 -10330706 AA209487 5p15.2 Hs.192586 4

protein binding

hydrolase activity

gamma-Hexachlorocyclohexane degradation

Fluorobenzoate degradation

1,4-Dichlorobenzene degradation

Metabolic pathways

214053_at -0.784 5.754 -2.480 2.528e-02 0.243 -3.563 ERBB4 v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian) 2 -211948686 AW772192 2q33.3-q34 Hs.390729 112

nucleotide binding

transmembrane receptor protein tyrosine kinase activity

receptor activity

protein binding

ATP binding

protein amino acid phosphorylation

signal transduction

transmembrane receptor protein tyrosine kinase signaling pathway

nervous system development

heart development

cell proliferation

membrane

integral to membrane

basolateral plasma membrane

transferase activity

cell fate commitment

ErbB signaling pathway

Calcium signaling pathway

Endocytosis

221647_s_at 0.252 7.357 2.480 2.530e-02 0.243 -3.564 RIC8A resistance to inhibitors of cholinesterase 8 homolog A (C. elegans) 11 198529 AL136935 11p15.5 Hs.592292 16

in utero embryonic development

G-protein alpha-subunit binding

guanyl-nucleotide exchange factor activity

GTPase activator activity

cytoplasm

visual learning

response to light stimulus

 
207254_at 0.195 4.682 2.480 2.532e-02 0.243 -3.565 SLC15A1 solute carrier family 15 (oligopeptide transporter), member 1 13 -98134057 NM_005073 13q33-q34 Hs.436893 48

transporter activity

proton-dependent oligopeptide secondary active transmembrane transporter activity

membrane fraction

integral to plasma membrane

oligopeptide transport

digestion

protein transport

oligopeptide transporter activity

symporter activity

peptide:hydrogen symporter activity

membrane

 
202704_at -0.425 10.582 -2.480 2.532e-02 0.243 -3.565 TOB1 transducer of ERBB2, 1 17 -46294585 AA675892 17q21 Hs.709952 Hs.714409 Hs.719207 29

transcription corepressor activity

SH3/SH2 adaptor activity

cytoplasm

SMAD protein nuclear translocation

negative regulation of cell proliferation

negative regulation of BMP signaling pathway

negative regulation of osteoblast differentiation

SMAD binding

 
218093_s_at -0.434 8.468 -2.480 2.532e-02 0.243 -3.565 ANKRD10 ankyrin repeat domain 10 13 -110328887 NM_017664 13q34 Hs.525163 2    
217700_at 0.252 6.332 2.479 2.533e-02 0.243 -3.565 CNPY4 canopy 4 homolog (zebrafish) 7 99555200 AI818951 7q22.1 Hs.632293 5

extracellular region

 
203621_at 0.224 11.577 2.479 2.534e-02 0.243 -3.565 NDUFB5 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa 3 180805268 NM_002492 3q26.33 Hs.718447 9

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

transport

NADH dehydrogenase (ubiquinone) activity

membrane

integral to membrane

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

1552334_at 0.339 4.687 2.479 2.534e-02 0.243 -3.565 TRIOBP TRIO and F-actin binding protein 22 36422940, 36472186, 36472186 BG571343 22q13.1 Hs.533030 20

actin binding

protein binding

nucleus

cytoplasm

actin cytoskeleton

GTP-Rho binding

actin modification

myosin II binding

barbed-end actin filament capping

 
225616_at 0.371 6.771 2.479 2.535e-02 0.243 -3.566 SPRYD4 SPRY domain containing 4 12 55148567 AI570493 12q13.3 Hs.128676 4

nucleus

 
229089_at 0.242 5.952 2.479 2.535e-02 0.243 -3.566 ZNF509 zinc finger protein 509 4 4342824 BF061904 4p16.3 Hs.419997 3

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
218974_at -0.366 8.976 -2.479 2.535e-02 0.243 -3.566 SOBP sine oculis binding protein homolog (Drosophila) 6 107918009 NM_018013 6q21 Hs.445244 4

zinc ion binding

metal ion binding

 
232587_at 0.284 4.458 2.479 2.537e-02 0.243 -3.567 EML4 echinoderm microtubule associated protein like 4 2 42249993 AI208611 2p22-p21 Hs.593614 22

molecular_function

protein binding

cytoplasm

microtubule

microtubule-based process

mitosis

 
207589_at 0.218 3.016 2.479 2.537e-02 0.243 -3.567 ADRA1B adrenergic, alpha-1B-, receptor 5 159276317 NM_000679 5q23-q32 Hs.368632 36

integral to membrane of membrane fraction

blood vessel remodeling

response to amphetamine

vasoconstriction of artery involved in baroreceptor response to lowering of systemic arterial blood pressure

positive regulation of heart rate by epinephrine-norepinephrine

positive regulation of the force of heart contraction by epinephrine-norepinephrine

receptor activity

G-protein coupled receptor activity

adrenoceptor activity

alpha1-adrenergic receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

G-protein signaling, coupled to cAMP nucleotide second messenger

protein kinase cascade

cell-cell signaling

multicellular organismal development

adult heart development

locomotory behavior

cell proliferation

visual learning

cell growth

organ growth

glucose homeostasis

response to morphine

negative regulation of glycogen catabolic process

positive regulation of glycogen catabolic process

behavioral response to cocaine

Calcium signaling pathway

Neuroactive ligand-receptor interaction

Vascular smooth muscle contraction

219451_at -0.343 8.703 -2.478 2.539e-02 0.243 -3.567 MSRB2 methionine sulfoxide reductase B2 10 23424432 NM_016064 10p12 Hs.461420 14

protein-methionine-R-oxide reductase activity

transcription factor activity

mitochondrion

peptide-methionine-(S)-S-oxide reductase activity

zinc ion binding

oxidoreductase activity

protein repair

metal ion binding

oxidation reduction

 
244547_at 0.241 4.600 2.478 2.540e-02 0.243 -3.567 FLJ25006 uncharacterized serine/threonine-protein kinase SgK494 17 -23959108 AW081561 17q11.2 Hs.514033 Hs.657973 3

nucleotide binding

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

transferase activity

 
222119_s_at -0.312 7.534 -2.478 2.541e-02 0.243 -3.568 FBXO11 F-box protein 11 2 -47899228, -47893491, -47887562 AL117620 2p16.3 Hs.352677 12

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

nucleus

cytoplasm

protein modification process

ubiquitin-dependent protein catabolic process

zinc ion binding

histone-arginine N-methyltransferase activity

protein ubiquitination

peptidyl-arginine C-methyltransferase activity

metal ion binding

 
217976_s_at -0.331 7.682 -2.477 2.543e-02 0.244 -3.569 DYNC1LI1 dynein, cytoplasmic 1, light intermediate chain 1 3 -32542470 NM_016141 3p22.3 Hs.529495 11

nucleotide binding

motor activity

ATP binding

microtubule

dynein complex

 
216320_x_at 0.228 6.099 2.477 2.545e-02 0.244 -3.569 MST1 macrophage stimulating 1 (hepatocyte growth factor-like) 3 -49696384 U37055 3p21 Hs.349110 Hs.512587 31

catalytic activity

serine-type endopeptidase activity

calcium ion binding

extracellular region

proteolysis

blood coagulation

biological_process

 
217954_s_at -0.431 7.357 -2.476 2.549e-02 0.244 -3.571 PHF3 PHD finger protein 3 6 64414389 NM_015153 6q12 Hs.348921 13

molecular_function

protein binding

cellular_component

nucleus

transcription

multicellular organismal development

zinc ion binding

metal ion binding

 
210149_s_at 0.232 11.939 2.476 2.550e-02 0.244 -3.571 ATP5H ATP synthase, H+ transporting, mitochondrial F0 complex, subunit d 17 -70546549 AF061735 17q25 Hs.514465 13

mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)

mitochondrion

ion transport

hydrogen ion transmembrane transporter activity

ATP synthesis coupled proton transport

proton transport

membrane

ATPase activity

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

234803_at -0.247 2.976 -2.476 2.550e-02 0.244 -3.571 CSTL1 cystatin-like 1 20 23368321 AL096677 20p11.21 Hs.352134 8

cysteine-type endopeptidase inhibitor activity

extracellular region

peptidase inhibitor activity

 
215299_x_at 0.497 7.087 2.476 2.552e-02 0.244 -3.572 SULT1A1 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1 16 -28524418, -28524418, -28524416 U37025 16p12.1 Hs.567342 134

aryl sulfotransferase activity

cytoplasm

catecholamine metabolic process

lipid metabolic process

steroid metabolic process

amine metabolic process

transferase activity

Sulfur metabolism

220757_s_at -0.296 6.926 -2.476 2.552e-02 0.244 -3.572 UBXN6 UBX domain protein 6 19 -4396260 NM_025241 19p13 Hs.435255 Hs.661664 6

molecular_function

protein binding

cellular_component

nucleus

cytoplasm

centrosome

biological_process

modification-dependent protein catabolic process

 
243790_at 0.316 5.098 2.476 2.552e-02 0.244 -3.572 ZNF585A zinc finger protein 585A 19 -42332840, -42332840 AA203136 19q13.12 Hs.390568 Hs.659236 3

nucleic acid binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
209783_at -0.182 5.660 -2.476 2.552e-02 0.244 -3.572 DBP D site of albumin promoter (albumin D-box) binding protein 19 -53825628 D28468 19q13.3 Hs.414480 Hs.528006 35

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

regulation of cell proliferation

sequence-specific DNA binding

protein dimerization activity

rhythmic process

 
203558_at 0.208 6.030 2.475 2.554e-02 0.244 -3.573 CUL7 cullin 7 6 -43113332 NM_014780 6p21.1 Hs.520136 17

vasculogenesis

protein binding

anaphase-promoting complex

cytoplasm

proteolysis

ubiquitin-dependent protein catabolic process

regulation of mitotic metaphase/anaphase transition

cullin-RING ubiquitin ligase complex

ubiquitin protein ligase binding

Ubiquitin mediated proteolysis

1563462_at -1.004 3.885 -2.475 2.556e-02 0.244 -3.573 LOC285419 hypothetical LOC285419 4 124793389, 124914868 AL833449 4q28.1 Hs.535763 1    
210837_s_at -0.275 2.675 -2.475 2.556e-02 0.244 -3.573 PDE4D phosphodiesterase 4D, cAMP-specific (phosphodiesterase E3 dunce homolog, Drosophila) 5 -58300622, -58300622 AF012074 5q12 Hs.117545 89

3',5'-cyclic-AMP phosphodiesterase activity

soluble fraction

insoluble fraction

cytoplasm

centrosome

cytoskeleton

signal transduction

membrane

hydrolase activity

metal ion binding

Purine metabolism

223325_at -0.207 6.489 -2.475 2.557e-02 0.244 -3.574 TXNDC11 thioredoxin domain containing 11 16 -11680443 AF131780 16p13.13 Hs.313847 7

endoplasmic reticulum

membrane

integral to membrane

cell redox homeostasis

 
226987_at 0.195 5.537 2.475 2.557e-02 0.244 -3.574 RBM15B RNA binding motif protein 15B 3 51403770 W68720 3p21.2 Hs.118738 6

nucleotide binding

regulation of alternative nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

nucleoplasm

nucleolus

mRNA processing

nucleocytoplasmic transport

RNA splicing

negative regulation of transcription

interspecies interaction between organisms

 
227971_at 0.331 2.867 2.475 2.558e-02 0.244 -3.574 NRK Nik related kinase X 104953191 AI653107 Xq22.3 Hs.209527 9

nucleotide binding

transcription factor activity

protein serine/threonine kinase activity

small GTPase regulator activity

ATP binding

protein amino acid phosphorylation

transferase activity

regulation of transcription

 
218603_at -0.386 7.834 -2.474 2.559e-02 0.244 -3.574 HECA headcase homolog (Drosophila) 6 139497941 NM_016217 6q23-q24 Hs.197644 6

molecular_function

cellular_component

multicellular organismal development

respiratory tube development

 
224897_at -0.316 8.752 -2.474 2.559e-02 0.244 -3.574 WDR26 WD repeat domain 26 1 -222639467 BF510490 1q42.11-q42.12 Hs.497873 8

cytoplasm

 
229510_at 0.214 3.526 2.474 2.559e-02 0.244 -3.574 MS4A14 membrane-spanning 4-domains, subfamily A, member 14 11 59920062 AL044520 11q12.2 Hs.709736 3

receptor activity

signal transduction

membrane

integral to membrane

 
208806_at 0.234 6.140 2.474 2.560e-02 0.244 -3.575 CHD3 chromodomain helicase DNA binding protein 3 17 7728847, 7732893 BE379542 17p13.1 Hs.25601 36

nucleotide binding

chromatin

DNA binding

chromatin binding

ATP-dependent DNA helicase activity

helicase activity

protein binding

ATP binding

nucleus

chromatin assembly or disassembly

regulation of transcription from RNA polymerase II promoter

zinc ion binding

chromatin modification

NuRD complex

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

metal ion binding

 
225077_at -0.349 7.405 -2.473 2.563e-02 0.244 -3.576 CHD2 chromodomain helicase DNA binding protein 2 15 91244554, 91244554 AA890703 15q26 Hs.220864 9

nucleotide binding

chromatin

DNA binding

chromatin binding

ATP-dependent DNA helicase activity

helicase activity

ATP binding

nucleus

chromatin assembly or disassembly

regulation of transcription from RNA polymerase II promoter

hydrolase activity

 
204795_at 0.252 5.049 2.473 2.563e-02 0.244 -3.576 PRR3 proline rich 3 6 30632734, 1973311, 1771606 NM_025263 6p21.33 Hs.118354 Hs.651434 Hs.83147 4

nucleic acid binding

zinc ion binding

metal ion binding

 
209129_at 0.205 5.783 2.473 2.563e-02 0.244 -3.576 TRIP6 thyroid hormone receptor interactor 6 7 100302885 AF000974 7q22 Hs.534360 29

interleukin-1 receptor binding

focal adhesion

zinc ion binding

release of cytoplasmic sequestered NF-kappaB

kinase binding

positive regulation of cell migration

identical protein binding

interleukin-1 receptor complex

metal ion binding

thyroid hormone receptor binding

focal adhesion formation

 
218291_at 0.318 7.666 2.473 2.566e-02 0.244 -3.577 ROBLD3 roadblock domain containing 3 1 154291140 NM_014017 1q22 Hs.632483 5

lysosome

endosome

membrane

 
225086_at -0.270 7.742 -2.473 2.566e-02 0.244 -3.577 FAM98B family with sequence similarity 98, member B 15 36533619, 36533619 BF679966 15q14 Hs.6799 5

protein binding

 
230194_at -0.311 7.658 -2.473 2.566e-02 0.244 -3.577 LRPPRC leucine-rich PPR-motif containing 2 -43966866 AI341076 2p21 Hs.368084 15

condensed nuclear chromosome

DNA binding

single-stranded DNA binding

RNA binding

protein binding

nucleus

nuclear inner membrane

nuclear outer membrane

nucleoplasm

cytoplasm

mitochondrion

cytoskeleton

transport

microtubule binding

membrane

mitochondrial nucleoid

regulation of transcription

mitochondrion transport along microtubule

perinuclear region of cytoplasm

beta-tubulin binding

actin filament binding

mRNA transport

 
1552846_s_at 0.223 5.805 2.473 2.566e-02 0.244 -3.577 RAB42 RAB42, member RAS oncogene family 1 28791298 NM_152304 1p35.3 Hs.652321 3

nucleotide binding

GTP binding

small GTPase mediated signal transduction

membrane

 
239218_at 0.339 3.355 2.473 2.567e-02 0.245 -3.577 PDE1C phosphodiesterase 1C, calmodulin-dependent 70kDa 7 -31795771 AI800515 7p14.3 Hs.655694 10

calmodulin-dependent cyclic-nucleotide phosphodiesterase activity

calmodulin binding

signal transduction

hydrolase activity

Purine metabolism

Calcium signaling pathway

Olfactory transduction

220941_s_at 0.318 3.593 2.472 2.569e-02 0.245 -3.578 C21orf91 chromosome 21 open reading frame 91 21 -18083154 NM_017447 21q21.1 Hs.293811 8    
1562740_at 0.245 2.424 2.472 2.570e-02 0.245 -3.578 LOC285224 hypothetical protein LOC285224 3   AK097457 3q21.3 Hs.683815 1    
204162_at 0.325 3.030 2.472 2.571e-02 0.245 -3.578 NDC80 NDC80 homolog, kinetochore complex component (S. cerevisiae) 18 2561509 NM_006101 18p11.32 Hs.414407 35

mitotic sister chromatid segregation

condensed chromosome kinetochore

protein binding

nucleus

cell cycle

spindle organization

phosphoinositide-mediated signaling

cell division

 
204613_at 0.374 5.818 2.472 2.571e-02 0.245 -3.578 PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 16 80370430 NM_002661 16q24.1 Hs.413111 63

follicular B cell differentiation

phosphoinositide phospholipase C activity

signal transducer activity

calcium ion binding

protein binding

plasma membrane

intracellular signaling cascade

phospholipid catabolic process

regulation of gene expression

lipid catabolic process

hydrolase activity

activation of store-operated calcium channel activity

response to lipopolysaccharide

inositol trisphosphate biosynthetic process

negative regulation of programmed cell death

T cell receptor signaling pathway

Inositol phosphate metabolism

Metabolic pathways

ErbB signaling pathway

Calcium signaling pathway

Phosphatidylinositol signaling system

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Vibrio cholerae infection

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Glioma

Non-small cell lung cancer

209833_at 0.225 7.178 2.472 2.572e-02 0.245 -3.579 CRADD CASP2 and RIPK1 domain containing adaptor with death domain 12 92595281 U79115 12q21.33-q23.1 Hs.38533 Hs.591016 19

protease binding

cysteine-type endopeptidase activity

intracellular

proteolysis

induction of apoptosis

signal transduction

induction of apoptosis via death domain receptors

protein binding, bridging

regulation of apoptosis

death domain binding

 
230258_at 0.404 3.944 2.472 2.573e-02 0.245 -3.579 GLIS3 GLIS family zinc finger 3 9 -3814127, -3814127 AI277316 9p24.2 Hs.162125 Hs.644570 8

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

specific RNA polymerase II transcription factor activity

intracellular

zinc ion binding

nuclear part

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

 
238724_at -1.003 5.963 -2.471 2.574e-02 0.245 -3.580 BPGM 2,3-bisphosphoglycerate mutase 7 133982070 R63824 7q31-q34 Hs.198365 Hs.719267 20

bisphosphoglycerate mutase activity

2,3-bisphospho-D-glycerate 2-phosphohydrolase activity

phosphoglycerate mutase activity

carbohydrate metabolic process

glycolysis

respiratory gaseous exchange

metabolic process

hydrolase activity

isomerase activity

erythrocyte development

Glycolysis / Gluconeogenesis

Biosynthesis of phenylpropanoids

Metabolic pathways

210053_at -0.390 4.967 -2.471 2.575e-02 0.245 -3.580 TAF5 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa 10 105117713 AW138827 10q24-q25.2 Hs.96103 37

transcription factor activity

transcription factor activity

histone acetyltransferase activity

nucleus

nucleoplasm

transcription factor TFIID complex

nucleolus

cytoplasm

cytoskeleton

transcription initiation from RNA polymerase II promoter

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

promoter binding

chromatin modification

transcription initiation factor activity

transcription factor TFTC complex

interspecies interaction between organisms

regulation of transcription

protein dimerization activity

Basal transcription factors

226246_at 0.300 5.467 2.471 2.575e-02 0.245 -3.580 KCTD1 potassium channel tetramerisation domain containing 1 18 -22288871, -22288871, -22288871 AA115278 18q11.2 Hs.526630 7

voltage-gated potassium channel activity

protein binding

potassium ion transport

voltage-gated potassium channel complex

membrane

 
1564536_at 0.304 7.078 2.471 2.575e-02 0.245 -3.580 ASB10 ankyrin repeat and SOCS box-containing 10 7 -150503717, -150503717 AK055536 7q36.1 Hs.647081 6

intracellular signaling cascade

modification-dependent protein catabolic process

 
1569450_at -0.275 2.680 -2.471 2.576e-02 0.245 -3.580 CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 7 116289798 BC015963 7q31.2-q31.3 Hs.446123 14

actin binding

protein binding

protein complex assembly

cell motion

F-actin capping protein complex

actin cytoskeleton organization

actin filament capping

 
229796_at -0.412 8.063 -2.471 2.577e-02 0.245 -3.581 SIX4 SIX homeobox 4 14 -60246008 AI554514 14q23 Hs.690393 Hs.97849 9

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anatomical structure morphogenesis

sequence-specific DNA binding

 
241842_x_at 0.222 4.339 2.471 2.577e-02 0.245 -3.581 C19orf45 chromosome 19 open reading frame 45 19 7468444 AW340486 19p13.2 Hs.631862 3    
244654_at 0.293 3.979 2.471 2.578e-02 0.245 -3.581 MYO1G myosin IG 7 -44968784 BE646398 7p13-p11.2 Hs.37617 8

nucleotide binding

motor activity

actin binding

calmodulin binding

ATP binding

myosin complex

 
215505_s_at -0.491 5.422 -2.471 2.578e-02 0.245 -3.581 STRN3 striatin, calmodulin binding protein 3 14 -30432755 AF243424 14q13-q21 Hs.21016 Hs.401843 13

calmodulin binding

membrane fraction

nucleus

cytoplasm

cytosol

cell cycle

membrane

 
225686_at 0.325 4.104 2.470 2.581e-02 0.245 -3.582 SKA2 spindle and kinetochore associated complex subunit 2 17 -54542089 BE048371 17q22 Hs.463607 7

mitotic anaphase

outer kinetochore of condensed chromosome

protein binding

spindle microtubule

cell cycle

chromosome segregation

microtubule binding

regulation of microtubule polymerization or depolymerization

cell division

 
228634_s_at -0.539 6.543 -2.470 2.583e-02 0.245 -3.583 CSDA cold shock domain protein A 12 -10742944 BF195718 12p13.1 Hs.221889 20

negative regulation of transcription from RNA polymerase II promoter

double-stranded DNA binding

transcription factor activity

RNA polymerase II transcription factor activity

transcription corepressor activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

response to cold

Tight junction

223666_at -0.300 5.137 -2.468 2.589e-02 0.246 -3.585 SNX5 sorting nexin 5 20 -17870243, -17870243 BC002724 20p11 Hs.316890 14

protein binding

cell communication

protein transport

phosphoinositide binding

 
243438_at 0.211 5.279 2.468 2.590e-02 0.246 -3.585 PDE7B phosphodiesterase 7B 6 136214526 BE968570 6q23-q24 Hs.719318 6

3',5'-cyclic-AMP phosphodiesterase activity

signal transduction

synaptic transmission

hydrolase activity

Purine metabolism

1561660_at -0.288 2.591 -2.468 2.590e-02 0.246 -3.585 MCART6 mitochondrial carrier triple repeat 6 X -103230553 AL833609 Xq22.2 Hs.660022 1

binding

mitochondrion

mitochondrial inner membrane

transport

membrane

integral to membrane

 
213838_at -0.290 7.173 -2.468 2.591e-02 0.246 -3.585 NOL7 nucleolar protein 7, 27kDa 6 13723537 AA191426 6p23 Hs.306242 9

nucleus

nucleolus

 
242835_s_at -0.323 5.308 -2.468 2.591e-02 0.246 -3.585 LOC728730 hypothetical LOC728730 2   AW772084 2p22.1        
218157_x_at 0.283 6.224 2.468 2.591e-02 0.246 -3.586 CDC42SE1 CDC42 small effector 1 1 -149290070 NM_020239 1q21.3 Hs.22065 4

GTPase inhibitor activity

protein binding

cytoplasm

cytoskeleton

plasma membrane

phagocytosis

signal transduction

regulation of cell shape

 
204233_s_at 0.237 5.092 2.468 2.593e-02 0.246 -3.586 CHKA choline kinase alpha 11 -67576901 AI991328 11q13.2 Hs.77221 21

nucleotide binding

choline kinase activity

cholinesterase activity

signal transducer activity

ATP binding

cytoplasm

lipid metabolic process

phosphatidylcholine biosynthetic process

lipid transport

transferase activity

protein homodimerization activity

Glycerophospholipid metabolism

Metabolic pathways

211528_x_at 0.388 9.241 2.468 2.593e-02 0.246 -3.586 HLA-G major histocompatibility complex, class I, G 6 29902734, 1247153, 1049287 M90685 6p21.3 Hs.512152 316

antigen processing and presentation of peptide antigen via MHC class I

immune response

cellular defense response

membrane

integral to membrane

antigen processing and presentation

MHC class I receptor activity

MHC class I protein complex

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

233916_at 0.298 3.388 2.467 2.597e-02 0.246 -3.587 KIAA1486 KIAA1486 2 225973845 AB040919 2q36.3 Hs.224409 4    
213154_s_at -0.352 7.691 -2.467 2.599e-02 0.246 -3.588 BICD2 bicaudal D homolog 2 (Drosophila) 9 -94513465 AI934125 9q22.31 Hs.436939 15

protein binding

cytoplasm

Golgi apparatus

cytoskeleton

transport

microtubule-based movement

 
230209_at -0.669 5.252 -2.466 2.601e-02 0.246 -3.589 ZXDC ZXD family zinc finger C 3 -127652648, -127639133 AW194655 3q21.3 Hs.440049 Hs.711046 8

nucleic acid binding

transcription factor activity

intracellular

nucleus

zinc ion binding

transcription activator activity

LRR domain binding

identical protein binding

positive regulation of transcription

metal ion binding

C2H2 zinc finger domain binding

 
223294_at -0.342 7.370 -2.466 2.602e-02 0.246 -3.589 CXorf26 chromosome X open reading frame 26 X 75309172 BC001220 Xq13.3 Hs.370100 6

molecular_function

cellular_component

biological_process

 
210005_at 0.341 4.198 2.466 2.603e-02 0.246 -3.590 GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase 21 -33818186, -33798108, -33798108, -33798108 D32051 21q22.1 21q22.11 Hs.473648 23

nucleotide binding

phosphoribosylamine-glycine ligase activity

phosphoribosylamine-glycine ligase activity

phosphoribosylformylglycinamidine cyclo-ligase activity

phosphoribosylformylglycinamidine cyclo-ligase activity

phosphoribosylglycinamide formyltransferase activity

protein binding

ATP binding

cytoplasm

cytosol

purine nucleotide biosynthetic process

'de novo' IMP biosynthetic process

methyltransferase activity

biosynthetic process

purine base biosynthetic process

transferase activity

ligase activity

manganese ion binding

metal ion binding

Purine metabolism

One carbon pool by folate

Metabolic pathways

208158_s_at -0.250 10.171 -2.465 2.604e-02 0.246 -3.590 OSBPL1A oxysterol binding protein-like 1A 18 -19996008, -19996008 NM_018030 18q11.1 Hs.370725 12

phospholipid binding

intracellular

lipid transport

steroid metabolic process

cholesterol metabolic process

vesicle-mediated transport

 
205101_at 0.330 4.695 2.465 2.604e-02 0.246 -3.590 CIITA class II, major histocompatibility complex, transactivator 16 10878555 NM_000246 16p13 Hs.701991 112

nucleotide binding

DNA binding

RNA polymerase II transcription factor activity

transcription coactivator activity

ATP binding

nucleus

immune response

protein C-terminus binding

negative regulation of specific transcription from RNA polymerase II promoter

promoter binding

transcription repressor activity

protein complex binding

negative regulation of collagen biosynthetic process

transcription activator binding

response to interferon-gamma

ubiquitin binding

positive regulation of MHC class II biosynthetic process

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

response to antibiotic

Antigen processing and presentation

Primary immunodeficiency

207312_at -0.764 7.698 -2.465 2.605e-02 0.246 -3.590 PHKG1 phosphorylase kinase, gamma 1 (muscle) 7 -56116168 NM_006213 7p11.2 Hs.715728 23

nucleotide binding

protein serine/threonine kinase activity

phosphorylase kinase activity

calmodulin binding

ATP binding

phosphorylase kinase complex

carbohydrate metabolic process

glycogen biosynthetic process

protein amino acid phosphorylation

transferase activity

Calcium signaling pathway

Insulin signaling pathway

226225_at 0.669 6.595 2.465 2.606e-02 0.246 -3.591 MCC mutated in colorectal cancers 5 -112385694, -112385694 BE967311 5q21 Hs.593171 18

receptor activity

protein binding

signal transduction

 
209849_s_at 0.276 7.761 2.465 2.606e-02 0.246 -3.591 RAD51C RAD51 homolog C (S. cerevisiae) 17 54124961, 54124961 AF029669 17q22-q23 Hs.412587 33

nucleotide binding

DNA binding

ATP binding

nucleus

DNA repair

response to DNA damage stimulus

female meiosis sister chromatid cohesion

reciprocal meiotic recombination

male meiosis I

spermatogenesis

DNA-dependent ATPase activity

crossover junction endodeoxyribonuclease activity

nucleoside-triphosphatase activity

Homologous recombination

202113_s_at -0.403 7.757 -2.464 2.610e-02 0.247 -3.592 SNX2 sorting nexin 2 5 122138648 AF043453 5q23 Hs.713554 20

protein binding

cytoplasm

intracellular protein transport

endocytosis

cell communication

protein transporter activity

phosphoinositide binding

 
221339_at -0.218 3.010 -2.464 2.610e-02 0.247 -3.592 OR10C1 olfactory receptor, family 10, subfamily C, member 1 6 29515771, 863077, 665027 NM_013941 6p22.1 Hs.631997 4

receptor activity

olfactory receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

sensory perception of smell

integral to membrane

response to stimulus

Olfactory transduction

32723_at 0.392 6.344 2.464 2.612e-02 0.247 -3.593 CSTF1 cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa 20 54400833, 54400980, 54401113 L02547 20q13.2 Hs.172865 19

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

mRNA polyadenylation

mRNA cleavage

 
221774_x_at -0.207 5.992 -2.464 2.613e-02 0.247 -3.593 FAM48A family with sequence similarity 48, member A 13 -36481450 AW003334 13q13.3 Hs.435815 14

protein binding

multicellular organismal development

gastrulation

 
229044_at 0.232 5.806 2.463 2.615e-02 0.247 -3.594 NUDT17 nudix (nucleoside diphosphate linked moiety X)-type motif 17 1 -144297851 AA284522 1q21.1 Hs.585066 4

magnesium ion binding

mitochondrion

hydrolase activity

manganese ion binding

 
208662_s_at -0.373 8.410 -2.463 2.618e-02 0.247 -3.595 TTC3 tetratricopeptide repeat domain 3 21 37367440, 37377116 AI885338 21q22.2 Hs.368214 9

protein binding

cellular_component

vacuole

biological_process

zinc ion binding

negative regulation of cell morphogenesis involved in differentiation

negative regulation of neuron differentiation

metal ion binding

response to protein stimulus

 
210746_s_at 0.163 3.885 2.463 2.618e-02 0.247 -3.595 EPB42 erythrocyte membrane protein band 4.2 15 -41276717 M30646 15q15-q21 Hs.368642 34

cell morphogenesis

protein-glutamine gamma-glutamyltransferase activity

structural constituent of cytoskeleton

protein binding

ATP binding

cytoplasm

plasma membrane

regulation of cell shape

peptide cross-linking

hemoglobin metabolic process

cortical cytoskeleton

erythrocyte maturation

spleen development

ion homeostasis

iron ion homeostasis

 
225649_s_at -0.621 6.829 -2.462 2.620e-02 0.247 -3.595 STK35 serine/threonine kinase 35 20 2031518 AA001414 20p13 Hs.100057 6

nucleotide binding

protein serine/threonine kinase activity

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

transferase activity

 
226942_at -0.341 5.788 -2.462 2.620e-02 0.247 -3.595 PHF20L1 PHD finger protein 20-like 1 8 133856785, 133856785, 133856785 AI742668 8q24.22 Hs.304362 4

nucleic acid binding

protein binding

zinc ion binding

metal ion binding

 
219350_s_at 0.203 8.408 2.462 2.620e-02 0.247 -3.595 DIABLO diablo homolog (Drosophila) 12 -121258162 NM_019887 12q24.31 Hs.169611 91

protein binding

mitochondrion

cytosol

induction of apoptosis

induction of apoptosis via death domain receptors

activation of caspase activity by cytochrome c

 
212895_s_at 0.240 6.877 2.462 2.621e-02 0.247 -3.596 ABR active BCR-related gene 17 -853509, -853508, -853508 AL527773 17p13.3 Hs.159306 11

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

GTPase activator activity

protein binding

intracellular

small GTPase mediated signal transduction

regulation of Rho protein signal transduction

 
208926_at -0.282 6.480 -2.462 2.621e-02 0.247 -3.596 NEU1 sialidase 1 (lysosomal sialidase) 6 -31934807, -3273082, -3074566 U84246 6p21.3 Hs.520037 41

exo-alpha-sialidase activity

protein binding

plasma membrane

metabolic process

hydrolase activity, acting on glycosyl bonds

cytoplasmic vesicle

lysosomal lumen

Other glycan degradation

Sphingolipid metabolism

Lysosome

227428_at -0.303 6.929 -2.462 2.624e-02 0.247 -3.597 GABPA GA binding protein transcription factor, alpha subunit 60kDa 21 26029199 BE876628 21q21-q22.1 21q21.3 Hs.246310 Hs.473470 34

negative regulation of transcription from RNA polymerase II promoter

in utero embryonic development

transcription factor activity

RNA polymerase II transcription factor activity

transcription coactivator activity

protein binding

nucleus

nucleolus

sequence-specific DNA binding

 
202990_at 0.353 4.741 2.462 2.624e-02 0.247 -3.597 PYGL phosphorylase, glycogen, liver 14 -50441685 NM_002863 14q21-q22 Hs.282417 19

nucleotide binding

purine binding

ATP binding

glucose binding

soluble fraction

carbohydrate metabolic process

glycogen metabolic process

drug binding

glycogen phosphorylase activity

AMP binding

transferase activity, transferring glycosyl groups

vitamin binding

pyridoxal phosphate binding

bile acid binding

glucose homeostasis

protein homodimerization activity

Starch and sucrose metabolism

Insulin signaling pathway

243316_x_at -0.230 2.638 -2.462 2.624e-02 0.247 -3.597 VPS26A vacuolar protein sorting 26 homolog A (S. pombe) 10 70553913 AA004710 10q21.1 Hs.499925 17

protein binding

cytoplasm

endosome

cytosol

vacuolar transport

protein transporter activity

protein transport

membrane

retromer complex

retrograde transport, endosome to Golgi

 
230737_s_at 0.214 4.357 2.462 2.624e-02 0.247 -3.597 LOC387647 patched domain containing 3 pseudogene 10 29738506 AW118878 10p11.23 Hs.719271 2    
212383_at -0.245 7.523 -2.461 2.625e-02 0.247 -3.597 ATP6V0A1 ATPase, H+ transporting, lysosomal V0 subunit a1 17 37864387 AL096733 17q21 Hs.463074 21

protein binding

cytoplasm

plasma membrane

ion transport

hydrogen ion transmembrane transporter activity

ATP synthesis coupled proton transport

proton transport

integral to membrane

cytoplasmic vesicle

proton-transporting two-sector ATPase complex, proton-transporting domain

melanosome

ATPase binding

Oxidative phosphorylation

Metabolic pathways

Lysosome

Vibrio cholerae infection

Epithelial cell signaling in Helicobacter pylori infection

210615_at 0.198 4.033 2.461 2.625e-02 0.247 -3.597 NRP1 neuropilin 1 10 -33526552, -33506424 AF280547 10p12 Hs.131704 Hs.714624 91

angiogenesis

receptor activity

vascular endothelial growth factor receptor activity

protein binding

extracellular region

plasma membrane

cell adhesion

signal transduction

cell-cell signaling

multicellular organismal development

nervous system development

axon guidance

positive regulation of cell proliferation

organ morphogenesis

integral to membrane

cell differentiation

Axon guidance

225556_at 0.220 7.459 2.461 2.626e-02 0.247 -3.597 VMA21 VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) X 150316362 BG290058 Xq28 Hs.58633 10

lysosome

endoplasmic reticulum

endoplasmic reticulum membrane

membrane

integral to membrane

COPII vesicle coat

cytoplasmic vesicle

vacuolar proton-transporting V-type ATPase complex assembly

 
231980_at -0.200 2.320 -2.461 2.626e-02 0.247 -3.597 DOK6 docking protein 6 18 65219270 AL120332 18q22.2 Hs.278285 4

insulin receptor binding

 
201230_s_at -0.375 7.925 -2.461 2.627e-02 0.247 -3.598 ARIH2 ariadne homolog 2 (Drosophila) 3 48931284 NM_006321 3p21.2-p21.3 Hs.633601 14

nucleic acid binding

protein binding

nucleus

ubiquitin-dependent protein catabolic process

multicellular organismal development

zinc ion binding

metal ion binding

 
208750_s_at -0.545 8.765 -2.461 2.628e-02 0.247 -3.598 ARF1 ADP-ribosylation factor 1 1 226336983, 226337473 AA580004 1q42 Hs.286221 97

Golgi membrane

nucleotide binding

GTPase activity

receptor signaling protein activity

protein binding

GTP binding

intracellular

Golgi apparatus

cytosol

cytosol

plasma membrane

retrograde vesicle-mediated transport, Golgi to ER

small GTPase mediated signal transduction

protein transport

membrane organization

vesicle-mediated transport

sarcomere

COPI coating of Golgi vesicle

Vibrio cholerae infection

40465_at -0.316 6.500 -2.461 2.628e-02 0.247 -3.598 DDX23 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 12 -47509805 AF026402 12q13.12 Hs.130098 13

nucleotide binding

cis assembly of pre-catalytic spliceosome

nuclear mRNA splicing, via spliceosome

nucleic acid binding

ATP-dependent RNA helicase activity

helicase activity

protein binding

ATP binding

nucleus

spliceosomal complex

U5 snRNP

RNA splicing

hydrolase activity

RNA splicing factor activity, transesterification mechanism

 
221884_at 0.326 5.524 2.461 2.629e-02 0.247 -3.598 MECOM MDS1 and EVI1 complex locus 3 -170283980, -170283980, -170283980, -170283980 BE466525 3q24-q28 Hs.659873 Hs.719216 46

molecular_function

DNA binding

transcription factor activity

protein binding

intracellular

nucleus

multicellular organismal development

biological_process

zinc ion binding

metal ion binding

MAPK signaling pathway

Pathways in cancer

Chronic myeloid leukemia

205891_at 0.256 4.176 2.460 2.630e-02 0.247 -3.599 ADORA2B adenosine A2b receptor 17 15788955 NM_000676 17p12-p11.2 Hs.167046 38

activation of MAPK activity

adenosine receptor activity, G-protein coupled

positive regulation of chronic inflammatory response to non-antigenic stimulus

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

cellular defense response

signal transduction

G-protein coupled receptor protein signaling pathway

activation of adenylate cyclase activity by G-protein signaling pathway

JNK cascade

excretion

positive regulation vascular endothelial growth factor production

positive regulation of cAMP biosynthetic process

positive regulation of cGMP biosynthetic process

positive regulation of guanylate cyclase activity

cellular response to extracellular stimulus

positive regulation of chemokine production

positive regulation of interleukin-6 production

positive regulation of mast cell degranulation

regulation of angiogenesis

relaxation of vascular smooth muscle

Calcium signaling pathway

Neuroactive ligand-receptor interaction

Vascular smooth muscle contraction

223551_at -0.617 4.326 -2.460 2.630e-02 0.247 -3.599 PKIB protein kinase (cAMP-dependent, catalytic) inhibitor beta 6 122834760, 122973075 AF225513 6q22.31 Hs.719228 10

protein kinase inhibitor activity

cAMP-dependent protein kinase inhibitor activity

negative regulation of protein kinase activity

 
218050_at -0.322 7.335 -2.460 2.631e-02 0.247 -3.599 UFM1 ubiquitin-fold modifier 1 13 37821941 NM_016617 13q13.3 Hs.643655 Hs.719178 11

protein binding

nucleus

cytoplasm

modification-dependent protein catabolic process

 
206468_s_at -0.207 5.991 -2.460 2.631e-02 0.247 -3.599 METTL13 methyltransferase like 13 1 170017383 NM_015935 1q24-q25.3 Hs.494705 11

metabolic process

methyltransferase activity

transferase activity

 
229245_at 0.353 4.256 2.460 2.632e-02 0.247 -3.599 PLEKHA6 pleckstrin homology domain containing, family A member 6 1 -202454603 AA535361 1q32.1 Hs.253146 9    
204136_at 0.260 6.388 2.460 2.632e-02 0.247 -3.599 COL7A1 collagen, type VII, alpha 1 3 -48576509 NM_000094 3p21.1 Hs.476218 93

serine-type endopeptidase inhibitor activity

protein binding

extracellular region

collagen type VII

basement membrane

cell adhesion

epidermis development

peptidase inhibitor activity

 
1559139_at 0.281 4.713 2.460 2.633e-02 0.247 -3.600 NOC2L nucleolar complex associated 2 homolog (S. cerevisiae) 1 -869445 BC009786 1p36.33 Hs.405987 23

protein binding

nucleus

nucleolus

 
1569354_at 0.217 3.689 2.460 2.633e-02 0.247 -3.600 NSUN6 NOL1/NOP2/Sun domain family, member 6 10 -18874269 BC033534 10p12.31 Hs.396175 4

RNA binding

methyltransferase activity

transferase activity

 
208371_s_at 0.214 7.767 2.460 2.634e-02 0.247 -3.600 RING1 ring finger protein 1 6 33284263, 4556442, 4362459 NM_002931 6p21.3 Hs.631989 26

ubiquitin ligase complex

sex chromatin

chromatin binding

ubiquitin-protein ligase activity

retinoid-X receptor activity

protein binding

nucleus

nucleolus

cytoplasm

zinc ion binding

anterior/posterior pattern formation

transcription repressor activity

chromatin modification

histone ubiquitination

nuclear speck

ligase activity

modification-dependent protein catabolic process

thyroid hormone receptor coactivator activity

PcG protein complex

vitamin D receptor binding

retinoic acid receptor binding

regulation of transcription

metal ion binding

thyroid hormone receptor binding

protein heterodimerization activity

camera-type eye morphogenesis

 
212151_at -0.342 8.826 -2.460 2.634e-02 0.247 -3.600 PBX1 pre-B-cell leukemia homeobox 1 1 162795425 BF967998 1q23 Hs.557097 56

transcription factor activity

protein binding

nucleus

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

C21-steroid hormone biosynthetic process

sex determination

cell differentiation

sequence-specific DNA binding

 
218158_s_at -0.414 7.947 -2.460 2.635e-02 0.247 -3.600 APPL1 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 3 57236804 NM_012096 3p21.1-p14.3 Hs.476415 23

protein binding

nucleus

cytoplasm

endosome

microsome

cytosol

cell cycle

signal transduction

cell proliferation

insulin receptor signaling pathway

endosome membrane

vesicle membrane

membrane

NuRD complex

protein kinase B binding

regulation of glucose import

regulation of establishment of protein localization

Pathways in cancer

Colorectal cancer

1558703_at 0.299 5.409 2.459 2.636e-02 0.247 -3.601 SLC46A1 solute carrier family 46 (folate transporter), member 1 17 -23745787 AL832613 17q11.2 Hs.446689 22

folic acid binding

cytoplasm

plasma membrane

transport

folic acid transporter activity

folic acid transport

integral to membrane

apical plasma membrane

 
229906_at 0.291 4.434 2.459 2.637e-02 0.247 -3.601 ARMC7 armadillo repeat containing 7 17 70617676 BF194773 17q25.1 Hs.413047 4

binding

 
225826_at 0.227 7.439 2.459 2.638e-02 0.247 -3.602 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 12 -108475903 AV702487 12q24 Hs.12106 16

nucleotide binding

ATP binding

mitochondrion

cob(I)yrinic acid a,c-diamide adenosyltransferase activity

cobalamin biosynthetic process

transferase activity

Porphyrin and chlorophyll metabolism

Metabolic pathways

218369_s_at 0.235 3.468 2.459 2.639e-02 0.247 -3.602 EXOSC1 exosome component 1 10 -99185655 NM_016046 10q24 Hs.632089 14

exosome (RNase complex)

RNA binding

exonuclease activity

protein binding

nucleus

nucleolus

rRNA processing

hydrolase activity

RNA degradation

223884_at 0.277 5.496 2.459 2.640e-02 0.247 -3.602 OPTC opticin 1 201729893 AF161702 1q32.1 Hs.632468 14

extracellular matrix structural constituent

protein binding

extracellular region

proteinaceous extracellular matrix

 
205024_s_at -0.185 4.407 -2.458 2.640e-02 0.247 -3.602 RAD51 RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae) 15 38774650 NM_002875 15q15.1 Hs.631709 241

recombinase activity

nucleotide binding

double-strand break repair via homologous recombination

condensed nuclear chromosome

damaged DNA binding

double-stranded DNA binding

double-stranded DNA binding

single-stranded DNA binding

single-stranded DNA binding

ATP binding

nucleus

nucleus

nucleoplasm

DNA unwinding during replication

DNA repair

mitotic recombination

response to DNA damage stimulus

meiosis

reciprocal meiotic recombination

protein C-terminus binding

PML body

ATPase activity

identical protein binding

single-stranded DNA-dependent ATPase activity

positive regulation of DNA ligation

protein homooligomerization

Homologous recombination

Pathways in cancer

Pancreatic cancer

218461_at -0.386 8.672 -2.458 2.642e-02 0.247 -3.603 GPN3 GPN-loop GTPase 3 12 -109374673 NM_016301 12q24.11 Hs.634680 9

nucleotide binding

GTP binding

protein complex

 
239359_at -0.239 4.505 -2.458 2.643e-02 0.247 -3.603 MARCH11 membrane-associated ring finger (C3HC4) 11 5 -16120473 AA383208 5p15.1 Hs.662216 2

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

cytoplasmic vesicle

metal ion binding

 
215598_at 0.179 3.424 2.458 2.645e-02 0.248 -3.604 TTC12 tetratricopeptide repeat domain 12 11 112690460 AK027161 11q23.2 Hs.288772 11

binding

 
235692_at 0.406 5.955 2.457 2.646e-02 0.248 -3.604 SH3KBP1 SH3-domain kinase binding protein 1 X -19462003, -19462003 AW024527 Xp22.1-p21.3 Hs.719268 58

molecular_function

protein binding

nucleus

nucleolus

cytoplasm

cytosol

cytoskeleton

plasma membrane

focal adhesion

endocytosis

apoptosis

cell-cell signaling

SH3 domain binding

synaptosome

cell junction

cytoplasmic vesicle

synapse

Endocytosis

234026_at 0.241 5.911 2.457 2.646e-02 0.248 -3.604 EML2 echinoderm microtubule associated protein like 2 19 -50804497 AK024984 19q13.32 Hs.24178 8

serine-type endopeptidase activity

protein binding

cytoplasm

microtubule

microtubule associated complex

proteolysis

visual perception

sensory perception of sound

intracellular membrane-bounded organelle

 
212553_at -0.208 7.955 -2.457 2.647e-02 0.248 -3.605 RPRD2 regulation of nuclear pre-mRNA domain containing 2 1 148603613 AK026120 1q21.3 Hs.213666 9

protein binding

 
226371_at -0.289 5.291 -2.457 2.650e-02 0.248 -3.606 KDM5A lysine (K)-specific demethylase 5A 12 -259483 AI672662 12p11 Hs.76272 25

transcription factor activity

iron ion binding

protein binding

intracellular

nucleus

nucleolus

cytoplasm

transcription from RNA polymerase II promoter

multicellular organismal development

zinc ion binding

oxidoreductase activity

transcription activator activity

chromatin modification

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

cyclin-dependent protein kinase activating kinase holoenzyme complex

positive regulation of transcription

metal ion binding

oxidation reduction

 
201621_at 0.302 6.768 2.456 2.651e-02 0.248 -3.606 NBL1 neuroblastoma, suppression of tumorigenicity 1 1 19842312, 19843394 NM_005380 1p36.13 Hs.654502 18

extracellular region

 
201506_at 0.411 6.943 2.456 2.652e-02 0.248 -3.606 TGFBI transforming growth factor, beta-induced, 68kDa 5 135392482 NM_000358 5q31 Hs.369397 Hs.645734 127

integrin binding

protein binding

extracellular region

proteinaceous extracellular matrix

extracellular space

negative regulation of cell adhesion

visual perception

cell proliferation

response to stimulus

 
211221_at -0.245 4.365 -2.456 2.653e-02 0.248 -3.607 TADA3L transcriptional adaptor 3 (NGG1 homolog, yeast)-like 3 -9799811, -9796653 AL117487 3p25.3 Hs.386390 29

transcription factor activity

transcription coactivator activity

histone acetyltransferase activity

protein binding

intracellular

nucleus

regulation of transcription from RNA polymerase II promoter

STAGA complex

transcription factor TFTC complex

histone H3 acetylation

regulation of transcription

 
1559635_at 0.223 4.594 2.456 2.655e-02 0.248 -3.607 CASC4 cancer susceptibility candidate 4 15 42368220 AK098265 15q15.3 Hs.512867 6

membrane

integral to membrane

 
218892_at 0.258 5.001 2.456 2.655e-02 0.248 -3.607 DCHS1 dachsous 1 (Drosophila) 11 -6599133 NM_024542 11p15.4 Hs.199850 3

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

calcium-dependent cell-cell adhesion

 
1553510_s_at -0.247 7.313 -2.455 2.657e-02 0.248 -3.608 RQCD1 RCD1 required for cell differentiation1 homolog (S. pombe) 2 219141921 NM_005444 2q35 Hs.148767 6

protein binding

nucleus

sex differentiation

cytokine-mediated signaling pathway

regulation of transcription

RNA degradation

210555_s_at -0.421 6.806 -2.455 2.657e-02 0.248 -3.608 NFATC3 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 16 66676875, 66676875 U85430 16q22.2 Hs.632209 32

transcription factor activity

nucleus

cytoplasm

regulation of transcription from RNA polymerase II promoter

inflammatory response

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

1555271_a_at 0.239 5.059 2.455 2.658e-02 0.248 -3.608 TERT telomerase reverse transcriptase 5 -1306286 AB085628 5p15.33 Hs.492203 518

telomere maintenance

chromosome, telomeric region

nuclear telomere cap complex

DNA binding

telomeric template RNA reverse transcriptase activity

protein binding

nucleus

nucleoplasm

chromosome

telomerase holoenzyme complex

anti-apoptosis

telomere maintenance via telomerase

senescence

transferase activity

nucleotidyltransferase activity

DNA strand elongation

telomere formation via telomerase

telomeric DNA binding

protein homodimerization activity

telomeric RNA binding

 
221495_s_at -0.239 7.674 -2.455 2.659e-02 0.248 -3.609 TCF25 transcription factor 25 (basic helix-loop-helix) 16 88467494 AF322111 16q24.3 Hs.415342 9

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

protein binding

nucleus

heart development

regulation of transcription

 
223189_x_at -0.312 7.558 -2.455 2.661e-02 0.248 -3.609 MLL5 myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila) 7 104441872 AW082219 7q22.1 Hs.592262 10

neutrophil mediated immunity

transcription coactivator activity

nucleus

DNA methylation

cell cycle

cell cycle arrest

methyltransferase activity

zinc ion binding

chromatin modification

histone methylation

nuclear speck

transferase activity

enzyme binding

erythrocyte differentiation

response to retinoic acid

neutrophil activation

histone methyltransferase activity (H3-K4 specific)

regulation of transcription

positive regulation of transcription, DNA-dependent

metal ion binding

retinoic acid receptor signaling pathway

MLL5-L complex

 
1563512_at -0.174 3.279 -2.455 2.661e-02 0.248 -3.609 NOS1AP nitric oxide synthase 1 (neuronal) adaptor protein 1 160306204, 160599396 AK024942 1q23.3 Hs.655000 41

protein binding

PDZ domain binding

nitric-oxide synthase binding

 
212189_s_at -0.321 7.333 -2.455 2.661e-02 0.248 -3.609 COG4 component of oligomeric golgi complex 4 16 -69071972 AK022874 16q22.1 Hs.208680 11

protein binding

Golgi apparatus

protein transport

membrane

Golgi transport complex

 
231773_at -0.571 7.221 -2.454 2.663e-02 0.248 -3.610 ANGPTL1 angiopoietin-like 1 1 -177085292 BF002046 1q25.2 Hs.591474 19

receptor binding

extracellular region

extracellular space

signal transduction

 
213866_at 0.294 6.086 2.454 2.663e-02 0.248 -3.610 SAMD14 sterile alpha motif domain containing 14 17 -45545033 AL134453 17q21.33 Hs.567769 6    
229912_at 0.287 3.693 2.454 2.664e-02 0.248 -3.610 SDK1 sidekick homolog 1, cell adhesion molecule (chicken) 7 3307605, 4135842 AL042166 7p22.2 Hs.653013 7

protein binding

cell adhesion

membrane

integral to membrane

 
200928_s_at -0.212 3.394 -2.454 2.665e-02 0.248 -3.610 RAB14 RAB14, member RAS oncogene family 9 -122980236 AL162081 9q32-q34.11 Hs.371563 Hs.713585 19

nucleotide binding

GTPase activity

protein binding

GTP binding

intracellular

membrane fraction

lysosome

early endosome

late endosome

rough endoplasmic reticulum

Golgi stack

cytosol

plasma membrane

Golgi to endosome transport

small GTPase mediated signal transduction

neurotransmitter secretion

protein transport

vesicle-mediated transport

trans-Golgi network transport vesicle

nuclear envelope-endoplasmic reticulum network

intracellular transport

perinuclear region of cytoplasm

 
233375_at 0.712 6.225 2.454 2.665e-02 0.248 -3.611 EFCAB2 EF-hand calcium binding domain 2 1 243199793, 243199906, 243200253, 243200253 AK001393 1q44 Hs.134857 5

calcium ion binding

 
229665_at 0.328 6.178 2.454 2.665e-02 0.248 -3.611 CSTF3 cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa 11 -33119552, -33062705 AI653037 11p13 Hs.44402 15

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

intracellular

nucleus

mRNA polyadenylation

mRNA cleavage

 
218790_s_at 0.254 5.262 2.454 2.666e-02 0.248 -3.611 TMLHE trimethyllysine hydroxylase, epsilon X -154372966 NM_018196 Xq28 Hs.133321 12

iron ion binding

mitochondrion

mitochondrial matrix

mitochondrial matrix

electron carrier activity

oxidoreductase activity

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

L-ascorbic acid binding

carnitine biosynthetic process

trimethyllysine dioxygenase activity

oxidation reduction

Lysine degradation

200951_s_at 0.235 3.456 2.453 2.666e-02 0.248 -3.611 CCND2 cyclin D2 12 4253162 AW026491 12p13 Hs.376071 73

G1/S transition of mitotic cell cycle

cyclin-dependent protein kinase holoenzyme complex

positive regulation of protein amino acid phosphorylation

protein binding

nucleus

positive regulation of cell proliferation

protein kinase binding

positive regulation of cyclin-dependent protein kinase activity

cell division

regulation of cell cycle

Cell cycle

p53 signaling pathway

Wnt signaling pathway

Focal adhesion

Jak-STAT signaling pathway

203384_s_at -0.236 5.872 -2.453 2.668e-02 0.249 -3.612 GOLGA1 golgi autoantigen, golgin subfamily a, 1 9 -126680394 NM_002077 9q33.3 Hs.133469 Hs.59504 11

Golgi apparatus

membrane

 
218068_s_at -0.344 7.409 -2.453 2.669e-02 0.249 -3.612 ZNF672 zinc finger protein 672 1 247099152 NM_024836 1q44 Hs.702427 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
213352_at -0.592 6.674 -2.453 2.670e-02 0.249 -3.612 TMCC1 transmembrane and coiled-coil domain family 1 3 -130849324, -130849324 AB018322 3q22.1 Hs.477547 Hs.709936 6

membrane

integral to membrane

 
212074_at -0.309 9.665 -2.453 2.671e-02 0.249 -3.613 UNC84A unc-84 homolog A (C. elegans) 7 822777 BE972774 7p22.3 Hs.438072 18

protein binding

nucleus

integral to nuclear inner membrane

cytoplasm

membrane

integral to membrane

nuclear membrane

perinuclear region of cytoplasm

 
1552424_at 0.341 2.866 2.452 2.672e-02 0.249 -3.613 KLHL10 kelch-like 10 (Drosophila) 17 37247568 NM_152467 17q21.2 Hs.127510 6

protein binding

cytoplasm

 
38703_at -0.273 8.876 -2.452 2.673e-02 0.249 -3.613 DNPEP aspartyl aminopeptidase 2 -219946423 AF005050 2q35 Hs.258551 8

aminopeptidase activity

protein binding

cytoplasm

vacuole

proteolysis

peptide metabolic process

peptidase activity

metallopeptidase activity

zinc ion binding

metal ion binding

 
211029_x_at 0.286 4.014 2.452 2.674e-02 0.249 -3.614 FGF18 fibroblast growth factor 18 5 170779271 BC006245 5q34 Hs.87191 25

angiogenesis

intramembranous ossification

endochondral ossification

chondrocyte development

extracellular region

extracellular region

extracellular space

nucleolus

signal transduction

cell-cell signaling

growth factor activity

positive regulation of cell proliferation

fibroblast growth factor receptor signaling pathway

anatomical structure morphogenesis

lung development

positive regulation of vascular endothelial growth factor receptor signaling pathway

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

1563426_a_at 0.319 4.127 2.452 2.676e-02 0.249 -3.614 LOC644613 hypothetical protein LOC644613 11   BC025792 11q13.1 Hs.604039 1    
212878_s_at -0.343 7.919 -2.451 2.678e-02 0.249 -3.615 KLC1 kinesin light chain 1 14 103165277, 103165277 AA284075 14q32.3 Hs.20107 Hs.657678 31

microtubule motor activity

protein binding

cytoplasm

cytosol

kinesin complex

microtubule

axon cargo transport

axon

cytoplasmic vesicle

ciliary rootlet

membrane-bounded organelle

 
206637_at 0.499 5.265 2.451 2.679e-02 0.249 -3.615 P2RY14 purinergic receptor P2Y, G-protein coupled, 14 3 -152412594, -152412594 NM_014879 3q24-q25.1 Hs.2465 27

receptor activity

G-protein coupled receptor activity

plasma membrane

immune response

signal transduction

G-protein coupled receptor protein signaling pathway

integral to membrane

purinergic nucleotide receptor activity, G-protein coupled

UDP-activated nucleotide receptor activity

Neuroactive ligand-receptor interaction

229427_at 0.199 5.005 2.451 2.680e-02 0.249 -3.616 SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A 5 -9088137 BF940761 5p15.2 Hs.27621 19

patterning of blood vessels

receptor activity

cell adhesion

cell-cell signaling

multicellular organismal development

nervous system development

axon guidance

axon guidance receptor activity

membrane

integral to membrane

cell differentiation

Axon guidance

213351_s_at -0.480 7.596 -2.451 2.680e-02 0.249 -3.616 TMCC1 transmembrane and coiled-coil domain family 1 3 -130849324, -130849324 AB018322 3q22.1 Hs.477547 Hs.709936 6

membrane

integral to membrane

 
1562436_at 0.222 4.017 2.451 2.681e-02 0.249 -3.616 CARS cysteinyl-tRNA synthetase 11 -2978734 AK093033 11p15.5 Hs.274873 14

tRNA binding

tRNA binding

nucleotide binding

cysteine-tRNA ligase activity

protein binding

ATP binding

cytoplasm

translation

cysteinyl-tRNA aminoacylation

zinc ion binding

ligase activity

protein homodimerization activity

metal ion binding

Aminoacyl-tRNA biosynthesis

210131_x_at 0.259 9.053 2.450 2.682e-02 0.249 -3.616 SDHC succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa 1 159550789 D49737 1q23.3 Hs.444472 27

succinate dehydrogenase activity

iron ion binding

mitochondrion

mitochondrial inner membrane

mitochondrial inner membrane

tricarboxylic acid cycle

transport

electron carrier activity

membrane

integral to membrane

electron transport chain

respiratory chain complex II

metal ion binding

Citrate cycle (TCA cycle)

Oxidative phosphorylation

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

212038_s_at -0.402 11.646 -2.450 2.683e-02 0.249 -3.617 VDAC1 voltage-dependent anion channel 1 5 -133335505 AL515918 5q31 Hs.519320 Hs.709372 73

behavioral fear response

protein binding

mitochondrion

mitochondrial outer membrane

mitochondrial inner membrane

plasma membrane

anion transport

apoptosis

nerve-nerve synaptic transmission

learning

voltage-gated anion channel activity

voltage-gated anion channel activity

mitochondrial nucleoid

interspecies interaction between organisms

pore complex

Calcium signaling pathway

Parkinson's disease

Huntington's disease

241859_at -0.605 5.324 -2.450 2.684e-02 0.249 -3.617 PLCL1 phospholipase C-like 1 2 198377670, 198377777 BF593050 2q33 Hs.153322 Hs.593586 8

phosphoinositide phospholipase C activity

signal transducer activity

calcium ion binding

cytoplasm

lipid metabolic process

intracellular signaling cascade

 
225099_at -0.396 7.385 -2.450 2.685e-02 0.249 -3.617 FBXO45 F-box protein 45 3 197780121 AA126446 3q29 Hs.169815 2

modification-dependent protein catabolic process

 
203030_s_at 0.253 4.774 2.450 2.686e-02 0.249 -3.618 PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 7 -157024510 AF007555 7q36 Hs.490789 Hs.715864 Hs.716042 19

receptor activity

transmembrane receptor protein tyrosine phosphatase activity

protein binding

integral to plasma membrane

protein amino acid dephosphorylation

membrane

hydrolase activity

Type I diabetes mellitus

212837_at -0.256 7.849 -2.450 2.687e-02 0.249 -3.618 FAM175B family with sequence similarity 175, member B 10 126480343 D63877 10q26.13 Hs.280695 10

protein binding

polyubiquitin binding

BRISC complex

 
218184_at -0.396 6.485 -2.449 2.689e-02 0.250 -3.619 TULP4 tubby like protein 4 6 158653679 NM_020245 6q25-q26 Hs.486993 7

transcription factor activity

protein binding

cellular_component

cytoplasm

regulation of transcription, DNA-dependent

intracellular signaling cascade

response to nutrient

modification-dependent protein catabolic process

 
220050_at 0.358 4.775 2.449 2.691e-02 0.250 -3.619 C9orf9 chromosome 9 open reading frame 9 9 134744110 NM_018956 9q34 Hs.62595 6    
204125_at -0.453 9.234 -2.449 2.691e-02 0.250 -3.619 NDUFAF1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1 15 -39466842 NM_016013 15q11.2-q21.3 Hs.106529 11

mitochondrion

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

protein complex assembly

unfolded protein binding

 
201847_at 0.411 6.862 2.449 2.692e-02 0.250 -3.619 LIPA lipase A, lysosomal acid, cholesterol esterase 10 -90963309, -90963305 NM_000235 10q23.2-q23.3 Hs.643030 28

sterol esterase activity

lysosome

protein amino acid N-linked glycosylation

lipid catabolic process

hydrolase activity

Steroid biosynthesis

Lysosome

207212_at 0.256 4.234 2.448 2.693e-02 0.250 -3.620 SLC9A3 solute carrier family 9 (sodium/hydrogen exchanger), member 3 5 -526333 NM_004174 5p15.3 Hs.658120 46

regulation of sodium ion transport

protein binding

cation transport

regulation of pH

receptor-mediated endocytosis

circadian rhythm

cell surface

antiporter activity

solute:hydrogen antiporter activity

sodium:hydrogen antiporter activity

membrane

integral to membrane

apical plasma membrane

sodium ion binding

brush border membrane

response to glucocorticoid stimulus

 
218377_s_at -0.355 7.689 -2.448 2.693e-02 0.250 -3.620 RWDD2B RWD domain containing 2B 21 -29299952 NM_016940 21q22.11 Hs.716643 8

molecular_function

cellular_component

biological_process

 
227564_at 0.312 5.560 2.448 2.693e-02 0.250 -3.620 HGSNAT heparan-alpha-glucosaminide N-acetyltransferase 8 43114748 BF433005 8p11.1 Hs.600384 11

lysosome

acyltransferase activity

heparan-alpha-glucosaminide N-acetyltransferase activity

membrane

integral to membrane

transferase activity

glycosaminoglycan metabolic process

Glycosaminoglycan degradation

Metabolic pathways

Lysosome

211566_x_at 0.259 7.654 2.448 2.694e-02 0.250 -3.620 BRE brain and reproductive organ-expressed (TNFRSF1A modulator) 2 27966985, 27967060 U19178 2p23.2 Hs.258314 20

nuclear ubiquitin ligase complex

peroxisome targeting sequence binding

tumor necrosis factor receptor binding

protein binding

nucleus

cytoplasm

double-strand break repair

apoptosis

response to DNA damage stimulus

signal transduction

response to ionizing radiation

chromatin modification

G2/M transition DNA damage checkpoint

polyubiquitin binding

positive regulation of DNA repair

positive regulation of anti-apoptosis

BRCA1-A complex

BRISC complex

 
218028_at 0.263 6.133 2.448 2.694e-02 0.250 -3.620 ELOVL1 elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1 1 -43601658 NM_016031 1p34.2 Hs.25597 7

protein binding

endoplasmic reticulum

fatty acid biosynthetic process

membrane

integral to membrane

 
201546_at -0.345 8.841 -2.448 2.695e-02 0.250 -3.620 TRIP12 thyroid hormone receptor interactor 12 2 -230340173 NM_004238 2q36.3 Hs.591633 10

ubiquitin-protein ligase activity

binding

cellular_component

intracellular

cytosol

protein modification process

protein ubiquitination

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

protein complex

thyroid hormone receptor binding

Ubiquitin mediated proteolysis

1560320_a_at 0.243 4.492 2.448 2.696e-02 0.250 -3.621 UNQ2963 hypothetical LOC283314 12 7152179 AL833364 12p13.31 Hs.715709 2    
202257_s_at 0.246 7.130 2.448 2.696e-02 0.250 -3.621 CD2BP2 CD2 (cytoplasmic tail) binding protein 2 16 -30269588, -30269588 NM_006110 16p11.2 Hs.202677 21

nuclear mRNA splicing, via spliceosome

protein binding

cytoplasm

 
223562_at 0.263 5.127 2.448 2.696e-02 0.250 -3.621 PARVG parvin, gamma 22 42900168, 42900168, 42908102, 42908102, 42908548, 42908589 AF237772 22q13.2-q13 Hs.658995 13

actin binding

protein binding

cytoplasm

cytoskeleton

plasma membrane

focal adhesion

cell adhesion

cell-matrix adhesion

cell junction

Focal adhesion

233959_at 0.333 4.603 2.447 2.698e-02 0.250 -3.622 LOC221442 adenylate cyclase 10 pseudogene 6 41176750 W26606 6p21.1 Hs.374076 1    
206631_at 0.356 3.049 2.447 2.700e-02 0.250 -3.622 PTGER2 prostaglandin E receptor 2 (subtype EP2), 53kDa 14 51850765 NM_000956 14q22 Hs.2090 60

receptor activity

G-protein coupled receptor activity

prostaglandin E receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

regulation of cell proliferation

Neuroactive ligand-receptor interaction

208659_at 0.484 6.958 2.447 2.700e-02 0.250 -3.622 CLIC1 chloride intracellular channel 1 6 -31806336, -3144481, -2945934 AF034607 6p22.1-p21.2 Hs.414565 36

voltage-gated ion channel activity

voltage-gated chloride channel activity

protein binding

membrane fraction

soluble fraction

nucleus

nuclear envelope

cytoplasm

cytosol

plasma membrane

brush border

ion transport

chloride transport

defense response

response to unfolded protein

signal transduction

response to nutrient

integral to membrane

chloride ion binding

chloride channel complex

protein complex

NF-kappaB binding

 
206392_s_at 0.392 3.499 2.447 2.701e-02 0.250 -3.622 RARRES1 retinoic acid receptor responder (tazarotene induced) 1 3 -159905133, -159897590 NM_002888 3q25.32 Hs.131269 11

negative regulation of cell proliferation

membrane

integral to membrane

 
223367_at 0.389 6.770 2.447 2.701e-02 0.250 -3.623 DNAJC30 DnaJ (Hsp40) homolog, subfamily C, member 30 7 -72733183 BC005056 7q11.23 Hs.647046 6

protein folding

heat shock protein binding

unfolded protein binding

 
218409_s_at -0.233 6.685 -2.447 2.702e-02 0.250 -3.623 DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 10 -22085482 NM_022365 10p12.31 Hs.499000 8

ATPase activator activity

DNA binding

nucleus

endoplasmic reticulum

microsome

regulation of translation

protein folding

membrane

integral to membrane

heat shock protein binding

negative regulation of proteolysis

regulation of protein secretion

unfolded protein binding

chaperone binding

 
214008_at -0.233 3.005 -2.447 2.702e-02 0.250 -3.623 TWF1 twinfilin, actin-binding protein, homolog 1 (Drosophila) 12 -42473792 N25562 12q12 Hs.189075 9

actin binding

protein tyrosine kinase activity

intracellular

cytoplasm

protein amino acid phosphorylation

actin cytoskeleton

 
217733_s_at 0.480 9.649 2.446 2.706e-02 0.250 -3.624 TMSB10 thymosin beta 10 2 84986273 NM_021103 2p11.2 Hs.446574 23

actin binding

cytoplasm

cytoskeleton

actin cytoskeleton organization

sequestering of actin monomers

 
232669_at 0.217 3.667 2.446 2.706e-02 0.250 -3.624 HIF3A hypoxia inducible factor 3, alpha subunit 19 51492144, 51493498, 51498715 AU145409 19q13.32 Hs.420830 12

DNA binding

signal transducer activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

signal transduction

transcription regulator activity

 
200632_s_at 0.266 6.810 2.446 2.706e-02 0.250 -3.624 NDRG1 N-myc downstream regulated 1 8 -134318595 NM_006096 8q24.3 Hs.372914 Hs.618002 70

protein binding

nucleus

cytoplasm

cytoskeleton

plasma membrane

response to metal ion

mast cell activation

 
222858_s_at 0.264 5.408 2.446 2.706e-02 0.250 -3.624 DAPP1 dual adaptor of phosphotyrosine and 3-phosphoinositides 4 100957003 AI632216 4q25-q27 Hs.436271 Hs.708484 15

protein tyrosine phosphatase activity

protein binding

phospholipid binding

cellular_component

cytoplasm

protein amino acid dephosphorylation

signal transduction

membrane

B cell receptor signaling pathway

215275_at 0.224 4.134 2.446 2.707e-02 0.250 -3.624 TRAF3IP3 TRAF3 interacting protein 3 1 207996146 AW963138 1q32.3-q41 Hs.147434 11

membrane

integral to membrane

 
207150_at 0.216 5.323 2.446 2.707e-02 0.250 -3.624 SLC18A3 solute carrier family 18 (vesicular acetylcholine), member 3 10 50488352 NM_003055 10q11.2 Hs.654374 15

acetylcholine transmembrane transporter activity

membrane fraction

integral to plasma membrane

acetylcholine transport

membrane

 
239998_at 0.217 5.708 2.446 2.708e-02 0.250 -3.625 C10orf53 chromosome 10 open reading frame 53 10 50557689, 50557689 AI990484 10q11.23 Hs.131287 4    
204652_s_at -0.248 5.531 -2.446 2.708e-02 0.250 -3.625 NRF1 nuclear respiratory factor 1 7 129038790, 129057154 NM_005011 7q32 Hs.654363 47

DNA binding

nucleus

generation of precursor metabolites and energy

regulation of transcription from RNA polymerase II promoter

regulation of transcription

Huntington's disease

237730_at 0.193 5.252 2.446 2.709e-02 0.250 -3.625 LOC100130700 similar to hCG2038355 16   AA824251 16p11.1 Hs.97712      
239110_s_at 0.327 3.271 2.445 2.713e-02 0.250 -3.626 LOC728190 hypothetical LOC728190 10 -88988405 W79643 10q23.2 Hs.655534 Hs.696346 1    
204776_at 0.971 8.293 2.445 2.713e-02 0.250 -3.627 THBS4 thrombospondin 4 5 79366746 NM_003248 5q13 Hs.211426 24

structural molecule activity

calcium ion binding

protein binding

extracellular region

extracellular region

proteinaceous extracellular matrix

substrate-bound cell migration, cell extension

cell adhesion

heparin binding

platelet alpha granule lumen

TGF-beta signaling pathway

Focal adhesion

ECM-receptor interaction

212740_at -0.295 6.743 -2.445 2.714e-02 0.250 -3.627 PIK3R4 phosphoinositide-3-kinase, regulatory subunit 4 3 -131880467 BF740111 3q22.1 Hs.149032 9

nucleotide binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

ATP binding

cellular_component

cytosol

protein amino acid phosphorylation

transferase activity

Regulation of autophagy

213438_at 0.330 5.005 2.444 2.716e-02 0.250 -3.627 NFASC neurofascin homolog (chicken) 1 203064404, 203064404, 203179976 AA995925 1q32.1 Hs.13349 28

protein binding

plasma membrane

cell adhesion

integral to membrane

Cell adhesion molecules (CAMs)

217046_s_at 0.276 5.703 2.444 2.716e-02 0.250 -3.627 AGER advanced glycosylation end product-specific receptor 6 -32256723, -3555933, -3363712 AJ133822 6p21.3 Hs.534342 212

transmembrane receptor activity

protein binding

extracellular region

plasma membrane

integral to plasma membrane

inflammatory response

cell surface receptor linked signal transduction

 
237251_at 0.262 4.596 2.444 2.716e-02 0.250 -3.628 C1orf92 chromosome 1 open reading frame 92 1 155157047 AI480252 1q23.1 Hs.491734 3    
203581_at -0.275 8.186 -2.444 2.717e-02 0.250 -3.628 RAB4A RAB4A, member RAS oncogene family 1 227473501 BC002438 1q42-q43 Hs.296169 43

nucleotide binding

GTPase activity

GTP binding

cytoplasm

small GTPase mediated signal transduction

protein transport

membrane

Endocytosis

212904_at -0.345 9.948 -2.444 2.718e-02 0.250 -3.628 LRRC47 leucine rich repeat containing 47 1 -3686643 AB033011 1p36.32 Hs.268488 5

RNA binding

phenylalanine-tRNA ligase activity

protein binding

translation

 
201423_s_at -0.340 8.987 -2.444 2.719e-02 0.250 -3.628 CUL4A cullin 4A 13 112911086, 112911931 AL037208 13q34 Hs.339735 48

G1/S transition of mitotic cell cycle

protein binding

DNA repair

ubiquitin-dependent protein catabolic process

response to DNA damage stimulus

cell cycle arrest

negative regulation of cell proliferation

induction of apoptosis by intracellular signals

cullin-RING ubiquitin ligase complex

ubiquitin protein ligase binding

Nucleotide excision repair

Ubiquitin mediated proteolysis

219065_s_at -0.438 9.125 -2.444 2.719e-02 0.250 -3.628 MEMO1 mediator of cell motility 1 2 -31946398, -31946397 NM_015955 2p22-p21 Hs.444969 10

nucleus

cytosol

 
231468_at 0.241 3.493 2.443 2.721e-02 0.251 -3.629 SH3BP4 SH3-domain binding protein 4 2 235525366 BF224439 2q37.1-q37.2 Hs.516777 12

molecular_function

signal transducer activity

protein binding

cellular_component

nucleus

coated pit

endocytosis

cell cycle

biological_process

membrane

clathrin-coated vesicle

cytoplasmic vesicle

 
234854_at 0.225 3.278 2.443 2.722e-02 0.251 -3.630 MDN1 MDN1, midasin homolog (yeast) 6 -90409951 AL096678 6q15 Hs.529948 7

nucleotide binding

ATP binding

nucleus

ATPase activity

regulation of protein complex assembly

unfolded protein binding

 
201740_at 0.249 11.255 2.443 2.722e-02 0.251 -3.630 NDUFS3 NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase) 11 47557137 NM_004551 11p11.11 Hs.502528 23

NADH dehydrogenase activity

protein binding

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

oxygen and reactive oxygen species metabolic process

transport

induction of apoptosis

NADH dehydrogenase (ubiquinone) activity

electron carrier activity

membrane

electron transport chain

negative regulation of cell growth

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

1569315_s_at 0.351 3.075 2.443 2.724e-02 0.251 -3.630 LOC100272228 hypothetical LOC100272228 X 148857423 BC032484   Hs.496916 4    
229537_at -0.411 4.522 -2.442 2.726e-02 0.251 -3.631 LMO4 LIM domain only 4 1 87566738 AI694521 1p22.3 Hs.436792 21

neural tube closure

transcription factor activity

transcription factor complex

transcription from RNA polymerase II promoter

transcription factor binding

zinc ion binding

regulation of transcription

metal ion binding

 
232311_at 0.308 4.861 2.442 2.726e-02 0.251 -3.631 B2M beta-2-microglobulin 15 42790976 AU147899 15q21-q22.2 Hs.534255 Hs.709313 169

Golgi membrane

antigen processing and presentation of peptide antigen via MHC class I

protein binding

extracellular region

Golgi apparatus

plasma membrane

plasma membrane

immune response

early endosome membrane

MHC class I protein complex

Antigen processing and presentation

236030_at 0.253 6.099 2.442 2.726e-02 0.251 -3.631 RCOR2 REST corepressor 2 11 -63435277 BF528119 11q13.1 Hs.98788 2

transcription factor activity

transcription corepressor activity

protein binding

nucleus

transcription factor complex

negative regulation of transcription

 
212550_at -0.351 6.371 -2.442 2.726e-02 0.251 -3.631 STAT5B signal transducer and activator of transcription 5B 17 -37604720 AI149535 17q11.2 Hs.719121 128

allantoin metabolic process

luteinization

natural killer cell differentiation

transcription factor activity

signal transducer activity

calcium ion binding

protein binding

nucleus

cytoplasm

citrate metabolic process

2-oxoglutarate metabolic process

succinate metabolic process

oxaloacetate metabolic process

isoleucine metabolic process

valine metabolic process

creatine metabolic process

fatty acid metabolic process

signal transduction

female pregnancy

lactation

positive regulation of cell proliferation

regulation of steroid metabolic process

cytokine-mediated signaling pathway

taurine metabolic process

lipid storage

regulation of cell adhesion

regulation of epithelial cell differentiation

response to estradiol stimulus

cellular response to hormone stimulus

T cell differentiation in the thymus

glucocorticoid receptor binding

positive regulation of multicellular organism growth

positive regulation of activated T cell proliferation

progesterone metabolic process

T cell homeostasis

negative regulation of apoptosis

positive regulation of interleukin-2 biosynthetic process

positive regulation of B cell differentiation

positive regulation of gamma-delta T cell differentiation

negative regulation of erythrocyte differentiation

positive regulation of survival gene product expression

positive regulation of mitotic cell cycle

positive regulation of transcription from RNA polymerase II promoter

creatinine metabolic process

development of secondary female sexual characteristics

development of secondary male sexual characteristics

Peyer's patch development

positive regulation of inflammatory response

JAK-STAT cascade involved in growth hormone signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

Jak-STAT signaling pathway

Pathways in cancer

Chronic myeloid leukemia

Acute myeloid leukemia

233571_x_at 0.521 8.583 2.442 2.728e-02 0.251 -3.632 PPDPF pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish) 20 61622576 AL121829 20q13.33 Hs.79625 3

multicellular organismal development

cell differentiation

 
220188_at 0.230 3.516 2.442 2.728e-02 0.251 -3.632 JPH3 junctophilin 3 16 86193999 NM_020655 16q24.3 Hs.592068 18

molecular_function

protein binding

endoplasmic reticulum

plasma membrane

junctional sarcoplasmic reticulum membrane

integral to membrane

regulation of ryanodine-sensitive calcium-release channel activity

calcium ion transport into cytosol

 
228957_at 0.227 5.212 2.441 2.730e-02 0.251 -3.632 ZNF362 zinc finger protein 362 1 33494760 AI224880 1p35.1 Hs.524248 2

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
235619_at -0.559 8.613 -2.441 2.731e-02 0.251 -3.632 LOC285986 hypothetical protein LOC285986 7   AI681644 7q21.3 Hs.602765 1    
221553_at -0.355 6.559 -2.441 2.733e-02 0.251 -3.633 MAGT1 magnesium transporter 1 X -76968519 AL136636 Xq21.1 Hs.323562 Hs.710189 14

dolichyl-diphosphooligosaccharide-protein glycotransferase activity

endoplasmic reticulum

oligosaccharyltransferase complex

membrane

integral to membrane

protein amino acid N-linked glycosylation via asparagine

 
201270_x_at -0.370 8.176 -2.441 2.735e-02 0.251 -3.634 NUDCD3 NudC domain containing 3 7 -44388489 NM_015332 7p13-p12 Hs.488171 11    
216900_s_at 0.235 3.932 2.440 2.735e-02 0.251 -3.634 CHRNA4 cholinergic receptor, nicotinic, alpha 4 20 -61445108 X89745 20q13.2-q13.3 Hs.10734 90

regulation of action potential

response to hypoxia

nicotinic acetylcholine-activated cation-selective channel activity

ion channel activity

extracellular ligand-gated ion channel activity

membrane fraction

plasma membrane

nicotinic acetylcholine-gated receptor-channel complex

DNA repair

ion transport

calcium ion transport

response to oxidative stress

signal transduction

synaptic transmission, cholinergic

external side of plasma membrane

regulation of dopamine secretion

acetylcholine receptor activity

integral to membrane

sensory perception of pain

cell junction

dendrite

behavioral response to nicotine

B cell activation

cell soma

synapse

postsynaptic membrane

cognition

membrane depolarization

regulation of inhibitory postsynaptic membrane potential

 
213394_at 0.281 6.371 2.440 2.736e-02 0.251 -3.634 MAPKBP1 mitogen-activated protein kinase binding protein 1 15 39853923 AI674759 15q15.1 Hs.513661 6    
236860_at 0.800 6.851 2.440 2.738e-02 0.251 -3.635 NPY6R neuropeptide Y receptor Y6 (pseudogene) 5 137171360 BF968482 5q31 Hs.643466 Hs.713225 4

peptide YY receptor activity

receptor activity

G-protein coupled receptor activity

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

membrane

 
203878_s_at 0.269 5.979 2.440 2.739e-02 0.251 -3.635 MMP11 matrix metallopeptidase 11 (stromelysin 3) 22 22445035 NM_005940 22q11.2 22q11.23 Hs.143751 30

metalloendopeptidase activity

calcium ion binding

extracellular region

proteinaceous extracellular matrix

proteolysis

multicellular organismal development

peptidase activity

zinc ion binding

collagen catabolic process

 
213366_x_at 0.350 11.912 2.440 2.740e-02 0.252 -3.635 ATP5C1 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 10 7870098 AV711183 10p15.1 Hs.271135 18

mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)

mitochondrion

mitochondrion

mitochondrial matrix

ion transport

ATP synthesis coupled proton transport

proton transport

membrane

ATPase activity

ATPase activity

hydrogen ion transporting ATP synthase activity, rotational mechanism

proton-transporting ATPase activity, rotational mechanism

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

244872_at -0.416 5.486 -2.440 2.741e-02 0.252 -3.636 RBBP4 retinoblastoma binding protein 4 1 32889335, 32889545 BE514107 1p35.1 Hs.16003 70

nucleus

DNA replication

chromatin remodeling

cell cycle

DNA-dependent ATPase activity

negative regulation of cell proliferation

Sin3 complex

NuRD complex

histone binding

histone deacetylase binding

regulation of transcription

 
210044_s_at 0.293 6.381 2.439 2.742e-02 0.252 -3.636 LYL1 lymphoblastic leukemia derived sequence 1 19 -13070846 BC002796 19p13.2 Hs.46446 15

DNA binding

nucleus

transcription regulator activity

regulation of transcription

 
223309_x_at -0.279 7.849 -2.439 2.743e-02 0.252 -3.637 PNPLA8 patatin-like phospholipase domain containing 8 7 -107899306 BG025248 7q31 Hs.617340 13

lysophospholipase activity

binding

ATP binding

intracellular

intracellular

membrane fraction

membrane fraction

cytoplasm

peroxisomal membrane

peroxisomal membrane

endoplasmic reticulum

Golgi apparatus

fatty acid metabolic process

fatty acid metabolic process

metabolic process

membrane

integral to membrane

lipid catabolic process

hydrolase activity

calcium-independent phospholipase A2 activity

calcium-independent phospholipase A2 activity

perinuclear region of cytoplasm

 
239279_at 0.382 4.233 2.439 2.744e-02 0.252 -3.637 LOC730102 hypothetical protein LOC730102 1   AI862518 1q25.2 Hs.149540      
231996_at -0.419 2.941 -2.439 2.744e-02 0.252 -3.637 N4BP2 NEDD4 binding protein 2 4 39734918 AB037834 4p14 Hs.391463 8

nucleotide binding

endonuclease activity

protein binding

ATP binding

cytoplasm

hydrolase activity

ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity

 
205692_s_at -0.539 6.968 -2.439 2.744e-02 0.252 -3.637 CD38 CD38 molecule 4 15389028 NM_001775 4p15 Hs.479214 105

NAD+ nucleosidase activity

receptor activity

binding

membrane fraction

plasma membrane

signal transduction

metabolic process

induction of apoptosis by extracellular signals

cell surface

integral to membrane

hydrolase activity, acting on glycosyl bonds

phosphorus-oxygen lyase activity

positive regulation of B cell proliferation

Nicotinate and nicotinamide metabolism

Metabolic pathways

Calcium signaling pathway

Hematopoietic cell lineage

206016_at -0.399 5.393 -2.439 2.744e-02 0.252 -3.637 CCDC22 coiled-coil domain containing 22 X 48978884 NM_014008 Xp11.23 Hs.247700 Hs.26333 6

molecular_function

cellular_component

biological_process

 
210241_s_at 0.374 6.667 2.439 2.746e-02 0.252 -3.637 TP53TG1 TP53 target 1 (non-protein coding) 7 -86792599 AB007458 7q21.1 Hs.274329 3

signal transducer activity

response to stress

 
218631_at 0.267 5.876 2.438 2.750e-02 0.252 -3.639 AVPI1 arginine vasopressin-induced 1 10 -99427170 NM_021732 10q24.2 Hs.23918 9

cell cycle

 
208168_s_at 0.216 3.223 2.438 2.750e-02 0.252 -3.639 CHIT1 chitinase 1 (chitotriosidase) 1 -201451829 NM_003465 1q31-q32 Hs.201688 42

polysaccharide catabolic process

chitinase activity

extracellular region

extracellular space

lysosome

carbohydrate metabolic process

chitin catabolic process

immune response

chitin binding

metabolic process

response to bacterium

cation binding

Amino sugar and nucleotide sugar metabolism

205384_at -0.347 9.199 -2.437 2.753e-02 0.252 -3.640 FXYD1 FXYD domain containing ion transport regulator 1 19 40321571, 40322231 NM_005031 19q13.1 Hs.442498 14

ion channel activity

chloride channel activity

plasma membrane

integral to plasma membrane

ion transport

chloride transport

muscle contraction

chloride ion binding

chloride channel complex

 
209793_at 0.286 3.469 2.437 2.754e-02 0.252 -3.640 GRIA1 glutamate receptor, ionotropic, AMPA 1 5 152850276 AL567302 5q31.1 5q33 Hs.519693 58

receptor activity

ion channel activity

extracellular-glutamate-gated ion channel activity

membrane fraction

endoplasmic reticulum

plasma membrane

ion transport

signal transduction

synaptic transmission

kainate selective glutamate receptor activity

integral to membrane

cell junction

alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex

synapse

postsynaptic membrane

Neuroactive ligand-receptor interaction

Long-term potentiation

Long-term depression

Amyotrophic lateral sclerosis (ALS)

240947_at -0.202 3.137 -2.437 2.757e-02 0.252 -3.641 ANO6 anoctamin 6 12 43896036, 43896036, 43896142, 43972732 N36984 12q12 Hs.696326 6

ion channel activity

chloride channel activity

calcium ion binding

ion transport

membrane

integral to membrane

chloride ion binding

chloride channel complex

 
206986_at 0.240 5.693 2.436 2.757e-02 0.252 -3.641 FGF18 fibroblast growth factor 18 5 170779271 AB007422 5q34 Hs.87191 25

angiogenesis

intramembranous ossification

endochondral ossification

chondrocyte development

extracellular region

extracellular region

extracellular space

nucleolus

signal transduction

cell-cell signaling

growth factor activity

positive regulation of cell proliferation

fibroblast growth factor receptor signaling pathway

anatomical structure morphogenesis

lung development

positive regulation of vascular endothelial growth factor receptor signaling pathway

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

205879_x_at 0.212 6.180 2.436 2.757e-02 0.252 -3.641 RET ret proto-oncogene 10 42892522, 42892522 BC004257 10q11.2 Hs.350321 421

nucleotide binding

transmembrane receptor protein tyrosine kinase activity

receptor activity

calcium ion binding

ATP binding

protein amino acid phosphorylation

homophilic cell adhesion

signal transduction

posterior midgut development

membrane

integral to membrane

transferase activity

Endocytosis

Pathways in cancer

Thyroid cancer

209031_at 0.598 6.696 2.436 2.757e-02 0.252 -3.641 CADM1 cell adhesion molecule 1 11 -114549554 AL519710 11q23.2 Hs.370510 50

T cell mediated cytotoxicity

receptor binding

receptor binding

plasma membrane

cell-cell junction

apoptosis

immune response

cell adhesion

homophilic cell adhesion

heterophilic cell adhesion

multicellular organismal development

spermatogenesis

protein C-terminus binding

cell recognition

cell recognition

integral to membrane

basolateral plasma membrane

cell differentiation

PDZ domain binding

susceptibility to natural killer cell mediated cytotoxicity

susceptibility to natural killer cell mediated cytotoxicity

protein homodimerization activity

positive regulation of cytokine secretion

activated T cell proliferation

detection of stimulus

detection of stimulus

Cell adhesion molecules (CAMs)

202236_s_at -0.553 8.193 -2.436 2.759e-02 0.252 -3.642 SLC16A1 solute carrier family 16, member 1 (monocarboxylic acid transporter 1) 1 -113255992 NM_003051 1p12 Hs.75231 43

protein binding

membrane fraction

plasma membrane

transport

mevalonate transmembrane transporter activity

symporter activity

secondary active monocarboxylate transmembrane transporter activity

organic anion transport

mevalonate transport

integral to membrane

 
205447_s_at 0.314 4.623 2.436 2.760e-02 0.252 -3.642 MAP3K12 mitogen-activated protein kinase kinase kinase 12 12 -52160546 BE222201 12q13 Hs.713539 22

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

membrane fraction

cytoplasm

cytosol

plasma membrane

protein kinase cascade

JNK cascade

histone phosphorylation

transferase activity

peptidyl-serine phosphorylation

peptidyl-threonine phosphorylation

protein kinase binding

growth cone

axon part

protein homodimerization activity

protein amino acid autophosphorylation

MAPK signaling pathway

223449_at 0.346 6.406 2.436 2.761e-02 0.252 -3.642 SEMA6A sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 5 -115807149 AF225425 5q23.1 Hs.156967 11

receptor activity

protein binding

apoptosis

cytoskeleton organization

cell surface receptor linked signal transduction

multicellular organismal development

nervous system development

axon guidance

organ morphogenesis

membrane

integral to membrane

cell differentiation

axon

Axon guidance

212984_at -0.350 7.170 -2.436 2.761e-02 0.252 -3.642 ATF2 activating transcription factor 2 2 -175647251 BE786164 2q32 Hs.592510 98

transcription factor activity

RNA polymerase II transcription factor activity

transcription coactivator activity

intracellular

nucleus

cytosol

regulation of transcription, DNA-dependent

zinc ion binding

sequence-specific DNA binding

metal ion binding

protein dimerization activity

MAPK signaling pathway

212410_at -0.318 9.692 -2.436 2.762e-02 0.252 -3.643 EFHA1 EF-hand domain family, member A1 13 -20964838 AI346431 13q12.11 Hs.412103 7

calcium ion binding

 
204493_at 0.526 3.728 2.435 2.763e-02 0.252 -3.643 BID BH3 interacting domain death agonist 22 -16596905, -16596905 NM_001196 22q11.1 Hs.591054 111

release of cytochrome c from mitochondria

death receptor binding

protein binding

membrane fraction

cytoplasm

mitochondrion

mitochondrial outer membrane

cytosol

cytosol

induction of apoptosis via death domain receptors

activation of pro-apoptotic gene products

membrane

regulation of mitochondrial membrane permeability

neuron apoptosis

p53 signaling pathway

Apoptosis

Natural killer cell mediated cytotoxicity

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

Pathways in cancer

1555501_s_at -0.322 4.778 -2.435 2.764e-02 0.253 -3.643 RSRC1 arginine/serine-rich coiled-coil 1 3 159310585 BC010357 3q25.32 Hs.591283 5

alternative nuclear mRNA splicing, via spliceosome

protein binding

nucleus

protein amino acid phosphorylation

nucleocytoplasmic transport

RNA splicing

nuclear speck

response to antibiotic

 
214228_x_at 0.316 6.145 2.435 2.766e-02 0.253 -3.644 TNFRSF4 tumor necrosis factor receptor superfamily, member 4 1 -1136568 AJ277151 1p36 Hs.129780 48

receptor activity

tumor necrosis factor receptor activity

integral to plasma membrane

immune response

cell surface

membrane

positive regulation of B cell proliferation

negative regulation of gene-specific transcription

T cell proliferation

negative regulation of transcription factor activity

positive regulation of immunoglobulin secretion

Cytokine-cytokine receptor interaction

227358_at 0.275 5.645 2.435 2.767e-02 0.253 -3.644 ZBTB46 zinc finger and BTB domain containing 46 20 -61846321 Z39566 20q13.33 Hs.585028 5

nucleic acid binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
1552506_at 0.168 3.694 2.434 2.769e-02 0.253 -3.645 CRB2 crumbs homolog 2 (Drosophila) 9 125158268 NM_173689 9q33.3 Hs.710092 7

calcium ion binding

extracellular region

plasma membrane

visual perception

integral to membrane

response to stimulus

 
241961_at 0.744 7.894 2.434 2.770e-02 0.253 -3.645 TECRL trans-2,3-enoyl-CoA reductase-like 4 -64826779 AI822082 4q13.1 Hs.227752 1

cytoplasm

lipid metabolic process

membrane

integral to membrane

oxidoreductase activity, acting on the CH-CH group of donors

 
203743_s_at -0.356 7.018 -2.434 2.770e-02 0.253 -3.645 TDG thymine-DNA glycosylase 12 102883722 NM_003211 12q24.1 Hs.584809 47

damaged DNA binding

protein binding

nucleus

nucleoplasm

nucleoplasm

base-excision repair

mismatch repair

response to DNA damage stimulus

metabolic process

pyrimidine-specific mismatch base pair DNA N-glycosylase activity

DNA N-glycosylase activity

mismatched DNA binding

depyrimidination

Base excision repair

218200_s_at 0.218 11.708 2.434 2.771e-02 0.253 -3.646 NDUFB2 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa 7 140042949 NM_004546 7q34 Hs.655788 8

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

transport

NADH dehydrogenase (ubiquinone) activity

membrane

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

207137_at 0.243 5.276 2.433 2.774e-02 0.253 -3.646 NFKBIL2 nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 2 8 -145624970 NM_013432 8q24.3 Hs.675285 6

transcription corepressor activity

protein binding

cytoplasm

cytoplasmic sequestering of transcription factor

 
208064_s_at 0.262 3.381 2.433 2.774e-02 0.253 -3.646 ST8SIA3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 18 53170718 NM_015879 18q21.31 Hs.23172 7

alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity

Golgi apparatus

protein amino acid glycosylation

N-glycan processing

glycosphingolipid biosynthetic process

oligosaccharide metabolic process

membrane

integral to membrane

integral to Golgi membrane

 
210876_at 0.249 4.033 2.433 2.775e-02 0.253 -3.647 ANXA2P1 annexin A2 pseudogene 1 4 -154448070 M62896 4q21-q31 Hs.546235 2    
202798_at -0.396 7.933 -2.433 2.776e-02 0.253 -3.647 SEC24B SEC24 family, member B (S. cerevisiae) 4 110574419 NM_006323 4q25 Hs.292472 11

Golgi membrane

transporter activity

protein binding

cytoplasm

endoplasmic reticulum

endoplasmic reticulum membrane

Golgi apparatus

intracellular protein transport

ER to Golgi vesicle-mediated transport

ER to Golgi vesicle-mediated transport

zinc ion binding

membrane

membrane organization

vesicle-mediated transport

COPII vesicle coat

perinuclear region of cytoplasm

 
233734_s_at 0.224 6.507 2.433 2.777e-02 0.253 -3.647 OSBPL5 oxysterol binding protein-like 5 11 -3064921 AW271225 11p15.4 Hs.436166 17

protein binding

cytosol

lipid transport

Golgi to plasma membrane transport

oxysterol binding

steroid metabolic process

cholesterol metabolic process

cholesterol transport

 
202605_at 0.310 6.700 2.433 2.777e-02 0.253 -3.647 GUSB glucuronidase, beta 7 -65063107 NM_000181 7q21.11 Hs.255230 45

beta-glucuronidase activity

lysosome

carbohydrate metabolic process

glycosaminoglycan catabolic process

metabolic process

cation binding

Pentose and glucuronate interconversions

Starch and sucrose metabolism

Glycosaminoglycan degradation

Porphyrin and chlorophyll metabolism

Drug metabolism - other enzymes

Metabolic pathways

Lysosome

223894_s_at -0.387 8.902 -2.433 2.778e-02 0.253 -3.648 AKTIP AKT interacting protein 16 -52082692 BC001134 16q12.2 Hs.380897 14

protein binding

cytoplasm

plasma membrane

apoptosis

endosome organization

lysosome organization

endosome to lysosome transport

protein transport

small conjugating protein ligase activity

HOPS complex

post-translational protein modification

early endosome to late endosome transport

regulation of protein metabolic process

FHF complex

 
203684_s_at -0.507 5.618 -2.433 2.779e-02 0.253 -3.648 BCL2 B-cell CLL/lymphoma 2 18 -59136166, -58941558 M13994 18q21.3 18q21.33 Hs.150749 705

G1/S transition of mitotic cell cycle

protein phosphatase type 2A complex

cell morphogenesis

response to acid

ovarian follicle development

ureteric bud development

branching involved in ureteric bud morphogenesis

behavioral fear response

response to hypoxia

B cell homeostasis

release of cytochrome c from mitochondria

regulation of cell-matrix adhesion

protease binding

lymphoid progenitor cell differentiation

B cell lineage commitment

T cell lineage commitment

immune system development

renal system process

intracellular

membrane fraction

nucleus

cytoplasm

mitochondrion

mitochondrial outer membrane

mitochondrial outer membrane

mitochondrial outer membrane

endoplasmic reticulum

endoplasmic reticulum membrane

microsome

cytosol

calcineurin complex

protein amino acid dephosphorylation

melanin metabolic process

oxygen and reactive oxygen species metabolic process

regulation of nitrogen utilization

anti-apoptosis

humoral immune response

response to oxidative stress

actin filament organization

female pregnancy

cell aging

response to nutrient

transcription factor binding

cell death

positive regulation of cell proliferation

male gonad development

activation of pro-apoptotic gene products

response to radiation

response to heat

response to external stimulus

response to toxin

post-embryonic development

organ morphogenesis

response to inorganic substance

response to iron ion

response to UV-B

response to gamma radiation

regulation of gene expression

negative regulation of calcium ion transport into cytosol

regulation of glycoprotein biosynthetic process

mesenchymal cell development

positive regulation of neuron maturation

positive regulation of smooth muscle cell migration

membrane

integral to membrane

cell-cell adhesion

transcription activator activity

peptidyl-threonine phosphorylation

cochlear nucleus development

gland morphogenesis

hemopoiesis

negative regulation of ossification

negative regulation of cell growth

negative regulation of cell migration

response to caffeine

hair follicle morphogenesis

axon regeneration

regulation of protein stability

nuclear membrane

endoplasmic reticulum calcium ion homeostasis

glomerulus development

negative regulation of cellular pH reduction

regulation of protein localization

negative regulation of myeloid cell apoptosis

T cell differentiation in the thymus

positive regulation of peptidyl-serine phosphorylation

negative regulation of osteoblast proliferation

response to cytokine stimulus

response to nicotine

organ growth

positive regulation of multicellular organism growth

B cell proliferation

response to drug

response to hydrogen peroxide

protein homodimerization activity

T cell homeostasis

positive regulation of catalytic activity

myelin sheath

CD8-positive, alpha-beta T cell lineage commitment

response to peptide hormone stimulus

regulation of protein homodimerization activity

regulation of protein heterodimerization activity

negative regulation of neuron apoptosis

ear development

response to estrogen stimulus

regulation of viral genome replication

response to ethanol

positive regulation of melanocyte differentiation

negative regulation of mitotic cell cycle

negative regulation of retinal cell programmed cell death

regulation of mitochondrial membrane permeability

protein heterodimerization activity

focal adhesion formation

positive regulation of pigmentation during development

spleen development

thymus development

gut morphogenesis

developmental growth

oocyte development

positive regulation of skeletal muscle fiber development

pigment granule organization

homeostasis of number of cells within a tissue

response to glucocorticoid stimulus

BH3 domain binding

defense response to virus

regulation of cell cycle

response to protein stimulus

regulation of mitochondrial membrane potential

negative regulation of mitochondrial depolarization

regulation of calcium ion transport

apoptosis in response to endoplasmic reticulum stress

Apoptosis

Focal adhesion

Neurotrophin signaling pathway

Amyotrophic lateral sclerosis (ALS)

Pathways in cancer

Colorectal cancer

Prostate cancer

Small cell lung cancer

232717_at 0.231 3.174 2.432 2.780e-02 0.253 -3.648 KALRN kalirin, RhoGEF kinase 3 125296247, 125296247, 125296247, 125786195 AU147936 3q21.2 Hs.8004 24

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

ATP binding

intracellular

cytoplasm

protein amino acid phosphorylation

intracellular signaling cascade

nervous system development

actin cytoskeleton

vesicle-mediated transport

transferase activity

regulation of Rho protein signal transduction

 
205441_at -0.263 7.035 -2.432 2.783e-02 0.253 -3.649 OCEL1 occludin/ELL domain containing 1 19 17198054 NM_024578 19p13.11 Hs.422676 3    
212013_at 0.398 6.142 2.432 2.784e-02 0.253 -3.650 PXDN peroxidasin homolog (Drosophila) 2 -1614665 D86983 2p25 Hs.332197 9

peroxidase activity

interleukin-1 receptor antagonist activity

calcium ion binding

protein binding

extracellular region

immune response

response to oxidative stress

oxidoreductase activity

heme binding

hydrogen peroxide catabolic process

oxidation reduction

 
1554093_a_at -0.303 8.125 -2.431 2.786e-02 0.253 -3.650 SNAPC5 small nuclear RNA activating complex, polypeptide 5, 19kDa 15 -64569719 BC014315 15q22.31 Hs.30174 7

transcription factor activity

nucleus

transcription from RNA polymerase II promoter

transcription initiation from RNA polymerase III promoter

regulation of transcription

 
1565613_at 0.222 2.521 2.431 2.788e-02 0.254 -3.651 LOC391081 similar to hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 1   BF939357 1p12        
203607_at -0.423 6.072 -2.431 2.789e-02 0.254 -3.651 INPP5F inositol polyphosphate-5-phosphatase F 10 121475598, 121475598, 121568775 NM_014937 10q26.11 Hs.369755 7

hydrolase activity

 
231759_at -0.427 6.621 -2.431 2.790e-02 0.254 -3.651 TAL2 T-cell acute lymphocytic leukemia 2 9 107464558 NM_005421 9q32 Hs.247978 9

DNA binding

protein binding

nucleus

behavior

post-embryonic development

thalamus development

transcription regulator activity

midbrain development

multicellular organism growth

regulation of transcription

 
238006_at 0.286 5.293 2.430 2.791e-02 0.254 -3.652 SIN3A SIN3 homolog A, transcription regulator (yeast) 15 -73448774, -73448774, -73448774 AI760013 15q24.2 Hs.513039 107

negative regulation of transcription from RNA polymerase II promoter

kinetochore

DNA binding

transcription corepressor activity

nucleus

nucleolus

transcription factor binding

Sin3 complex

Huntington's disease

202972_s_at -0.338 5.994 -2.430 2.791e-02 0.254 -3.652 FAM13A family with sequence similarity 13, member A 4 -89866128, -89866128 AW450403 4q22.1 Hs.97270 7    
229034_at -0.455 4.997 -2.430 2.793e-02 0.254 -3.652 SOBP sine oculis binding protein homolog (Drosophila) 6 107918009 BF511724 6q21 Hs.445244 4

zinc ion binding

metal ion binding

 
225061_at -0.513 9.832 -2.430 2.794e-02 0.254 -3.653 DNAJA4 DnaJ (Hsp40) homolog, subfamily A, member 4 15 76343541, 76344043, 76345614 N45231 15q25.1 Hs.513053 5

protein folding

zinc ion binding

membrane

heat shock protein binding

metal ion binding

unfolded protein binding

 
216231_s_at 0.348 12.302 2.430 2.794e-02 0.254 -3.653 B2M beta-2-microglobulin 15 42790976 AW188940 15q21-q22.2 Hs.534255 Hs.709313 169

Golgi membrane

antigen processing and presentation of peptide antigen via MHC class I

protein binding

extracellular region

Golgi apparatus

plasma membrane

plasma membrane

immune response

early endosome membrane

MHC class I protein complex

Antigen processing and presentation

202877_s_at 0.392 7.421 2.430 2.794e-02 0.254 -3.653 CD93 CD93 molecule 20 -23007992 W72082 20p11.21 Hs.97199 35

complement component C1q binding

receptor activity

calcium ion binding

protein binding

sugar binding

plasma membrane

phagocytosis

cell surface

integral to membrane

cytoplasmic membrane-bounded vesicle

cell-cell adhesion

macrophage activation

interspecies interaction between organisms

 
241984_at 0.193 4.793 2.430 2.794e-02 0.254 -3.653 FOXN3 forkhead box N3 14 -88692268, -88692268 BF984444 14q31.3 Hs.434286 Hs.621371 16

DNA damage checkpoint

G2 phase of mitotic cell cycle

transcription factor activity

nucleus

cell cycle

protein C-terminus binding

transcription repressor activity

sequence-specific DNA binding

negative regulation of transcription, DNA-dependent

 
201280_s_at 0.610 6.316 2.429 2.795e-02 0.254 -3.653 DAB2 disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila) 5 -39407536 NM_001343 5p13 Hs.481980 47

coated pit

protein C-terminus binding

cell proliferation

membrane

clathrin coated vesicle membrane

cytoplasmic vesicle

Endocytosis

1552546_a_at 0.247 3.209 2.429 2.800e-02 0.254 -3.655 LETM2 leucine zipper-EF-hand containing transmembrane protein 2 8 38363176 NM_144652 8p11.23 Hs.696457 2

mitochondrion

membrane

integral to membrane

 
200051_at -0.195 6.779 -2.429 2.800e-02 0.254 -3.655 SART1 squamous cell carcinoma antigen recognized by T cells 11 65485735 NM_005146 11q13.1 Hs.502883 27

molecular_function

nucleus

spliceosomal complex

cytoplasm

cytosol

mRNA processing

cell cycle arrest

RNA splicing

induction of apoptosis by intracellular signals

positive regulation of cytotoxic T cell differentiation

 
214898_x_at 0.234 5.600 2.428 2.801e-02 0.254 -3.655 MUC3B mucin 3B, cell surface associated 7   AB038783 7q22 Hs.489354 9

membrane

integral to membrane

 
201681_s_at -0.475 7.124 -2.428 2.803e-02 0.254 -3.656 DLG5 discs, large homolog 5 (Drosophila) 10 -79220554 AB011155 10q23 Hs.652690 49

protein binding

intracellular

cytoplasm

plasma membrane

cell-cell adherens junction

intracellular signaling cascade

negative regulation of cell proliferation

cell-cell adhesion

cell junction

receptor signaling complex scaffold activity

regulation of apoptosis

 
204984_at -0.489 7.219 -2.428 2.804e-02 0.254 -3.656 GPC4 glypican 4 X -132262729 NM_001448 Xq26.1 Hs.58367 12

extracellular region

proteinaceous extracellular matrix

extracellular space

plasma membrane

integral to plasma membrane

cell proliferation

anatomical structure morphogenesis

anchored to membrane

heparan sulfate proteoglycan binding

 
201656_at 0.381 7.315 2.428 2.804e-02 0.254 -3.656 ITGA6 integrin, alpha 6 2 173000559 NM_000210 2q31.1 Hs.133397 114

receptor activity

calcium ion binding

protein binding

cell-substrate junction assembly

cell adhesion

integrin-mediated signaling pathway

integrin complex

membrane

integral to membrane

Focal adhesion

ECM-receptor interaction

Cell adhesion molecules (CAMs)

Hematopoietic cell lineage

Regulation of actin cytoskeleton

Pathways in cancer

Small cell lung cancer

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

213501_at -0.374 6.331 -2.428 2.805e-02 0.254 -3.656 ACOX1 acyl-Coenzyme A oxidase 1, palmitoyl 17 -71449186 T62985 17q24-q25 17q25.1 Hs.464137 26

acyl-CoA dehydrogenase activity

acyl-CoA oxidase activity

acyl-CoA oxidase activity

cytoplasm

mitochondrion

peroxisome

peroxisomal membrane

generation of precursor metabolites and energy

lipid metabolic process

fatty acid beta-oxidation

prostaglandin metabolic process

spermatogenesis

electron carrier activity

protein N-terminus binding

FAD binding

oxidation reduction

Fatty acid metabolism

alpha-Linolenic acid metabolism

Biosynthesis of unsaturated fatty acids

Biosynthesis of plant hormones

Metabolic pathways

PPAR signaling pathway

224800_at -0.321 7.481 -2.428 2.806e-02 0.254 -3.657 WDFY1 WD repeat and FYVE domain containing 1 2 -224448308 AK022888 2q36.1 Hs.708107 5

phosphatidylinositol binding

nucleus

early endosome

cytosol

biological_process

zinc ion binding

metal ion binding

 
219242_at -0.354 7.866 -2.428 2.806e-02 0.254 -3.657 CEP63 centrosomal protein 63kDa 3 135687264, 135687264, 135687586, 135687736 NM_025180 3q22.2 Hs.443301 11

DNA damage checkpoint

spindle pole

protein binding

centrosome

spindle assembly

 
206854_s_at -0.393 6.392 -2.427 2.808e-02 0.254 -3.657 MAP3K7 mitogen-activated protein kinase kinase kinase 7 6 -91282073, -91282073 NM_003188 6q16.1-q16.3 Hs.719192 114

nucleotide binding

magnesium ion binding

positive regulation of T cell cytokine production

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

cytosol

protein amino acid phosphorylation

signal transduction

transforming growth factor beta receptor signaling pathway

activation of NF-kappaB-inducing kinase activity

transferase activity

positive regulation of interleukin-2 production

T cell receptor signaling pathway

positive regulation of T cell activation

MAPK signaling pathway

Wnt signaling pathway

Adherens junction

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

T cell receptor signaling pathway

206098_at -0.314 3.267 -2.427 2.809e-02 0.254 -3.658 ZBTB6 zinc finger and BTB domain containing 6 9 -124710155 NM_006626 9q33.2 Hs.654596 4

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
220346_at -0.227 5.740 -2.427 2.810e-02 0.254 -3.658 MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like 4 75242692 NM_025001 4q13.3 Hs.479954 2

histidine biosynthetic process

magnesium ion binding

methenyltetrahydrofolate cyclohydrolase activity

methylenetetrahydrofolate dehydrogenase (NAD+) activity

binding

purine nucleotide biosynthetic process

one-carbon metabolic process

cellular amino acid biosynthetic process

methionine biosynthetic process

folic acid and derivative biosynthetic process

oxidoreductase activity

hydrolase activity

oxidation reduction

 
205854_at 0.378 6.770 2.427 2.810e-02 0.254 -3.658 TULP3 tubby like protein 3 12 2870293 AK024246 12p13.3 Hs.655333 7

phosphatidylinositol-4,5-bisphosphate binding

nucleus

plasma membrane

regulation of transcription, DNA-dependent

G-protein coupled receptor protein signaling pathway

 
223504_at -0.444 5.860 -2.427 2.811e-02 0.254 -3.658 DNAJC27 DnaJ (Hsp40) homolog, subfamily C, member 27 2 -25020008 AL117490 2p23.3 Hs.434993 4

nucleotide binding

GTP binding

small GTPase mediated signal transduction

heat shock protein binding

 
211903_s_at 0.240 3.918 2.427 2.811e-02 0.254 -3.658 MPL myeloproliferative leukemia virus oncogene 1 43576061 M90103 1p34 Hs.82906 85

cytokine receptor activity

plasma membrane

integral to plasma membrane

cell surface receptor linked signal transduction

cell proliferation

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

225052_at -0.341 8.284 -2.427 2.811e-02 0.254 -3.658 TMEM203 transmembrane protein 203 9 -139218355 AL520657 9q34.3 Hs.591886 1

membrane

integral to membrane

 
1552721_a_at 0.314 3.048 2.426 2.816e-02 0.255 -3.660 FGF1 fibroblast growth factor 1 (acidic) 5 -141951926, -141951926, -141951926, -141951926, -141951926 NM_033136 5q31 Hs.483635 114

angiogenesis

induction of an organ

protein binding

extracellular region

proteinaceous extracellular matrix

extracellular space

signal transduction

multicellular organismal development

growth factor activity

heparin binding

cell proliferation

fibroblast growth factor receptor signaling pathway

anatomical structure morphogenesis

cell differentiation

lung development

positive regulation of epithelial cell proliferation

MAPK signaling pathway

Regulation of actin cytoskeleton

Pathways in cancer

Melanoma

218144_s_at 0.251 6.186 2.425 2.819e-02 0.255 -3.661 INF2 inverted formin, FH2 and WH2 domain containing 14 104226987, 104227002 NM_022489 14q32.33 Hs.24956 10

actin binding

cellular component organization

Rho GTPase binding

actin cytoskeleton organization

 
228794_at -0.642 12.513 -2.425 2.820e-02 0.255 -3.661 XIRP2 xin actin-binding repeat containing 2 2 167468220 AA211780 2q24.3 Hs.73680 8

actin binding

actin cytoskeleton organization

cell junction

 
219826_at 0.380 6.661 2.425 2.821e-02 0.255 -3.661 ZNF419 zinc finger protein 419 19 62690890 NM_024691 19q13.43 Hs.710285 6

DNA binding

intracellular

nucleus

cytoplasm

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1553709_a_at 0.194 6.693 2.425 2.822e-02 0.255 -3.662 PRPF38A PRP38 pre-mRNA processing factor 38 (yeast) domain containing A 1 52642806 NM_032284 1p33-p32.1 Hs.5301 5

nucleus

spliceosomal complex

mRNA processing

RNA splicing

 
204479_at 0.279 6.163 2.425 2.823e-02 0.255 -3.662 OSTF1 osteoclast stimulating factor 1 9 76893217 NM_012383 9q13-q21.2 Hs.494192 17

ossification

intracellular

cytoplasm

signal transduction

identical protein binding

 
224945_at -0.355 7.411 -2.424 2.824e-02 0.255 -3.662 BTBD7 BTB (POZ) domain containing 7 14 -92823726, -92773648 AI935657 14q32.12 Hs.525549 5

protein binding

 
1559661_at -0.320 3.220 -2.424 2.825e-02 0.255 -3.663 ODZ3 odz, odd Oz/ten-m homolog 3 (Drosophila) 4 183482130 AF195420 4q35.1 Hs.130438 7

signal transduction

membrane

integral to membrane

 
201787_at 0.313 6.168 2.424 2.825e-02 0.255 -3.663 FBLN1 fibulin 1 22 44277382, 44277382, 44277382, 44277382 NM_001996 22q13.31 Hs.24601 Hs.593123 55

extracellular matrix structural constituent

calcium ion binding

protein binding

extracellular region

proteinaceous extracellular matrix

extracellular space

soluble fraction

interspecies interaction between organisms

 
211081_s_at -0.315 3.392 -2.424 2.825e-02 0.255 -3.663 MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 14 -49954992 Z25426 14q11.2-q21 Hs.130491 14

nucleotide binding

protein serine/threonine kinase activity

small GTPase regulator activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

response to stress

protein kinase cascade

activation of JUN kinase activity

transferase activity

 
238962_at -0.193 2.441 -2.424 2.826e-02 0.255 -3.663 ZNF681 zinc finger protein 681 19 -23713836 AW305300 19p12 Hs.187337 Hs.399952 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
235300_x_at -0.483 5.652 -2.424 2.826e-02 0.255 -3.663 RCHY1 ring finger and CHY zinc finger domain containing 1 4 -76623370 AW236209 4q21.1 Hs.48297 20

protein binding

nucleus

cytoplasm

zinc ion binding

metal ion binding

p53 signaling pathway

Ubiquitin mediated proteolysis

205620_at 0.366 4.997 2.424 2.827e-02 0.255 -3.663 F10 coagulation factor X 13 112825113 NM_000504 13q34 Hs.361463 153

serine-type endopeptidase activity

calcium ion binding

protein binding

phospholipid binding

extracellular region

extracellular region

plasma membrane

proteolysis

blood coagulation, extrinsic pathway

peptidase activity

positive regulation of cell migration

intrinsic to external side of plasma membrane

positive regulation of protein kinase B signaling cascade

Complement and coagulation cascades

225467_s_at 0.241 6.879 2.424 2.827e-02 0.255 -3.663 RDH13 retinol dehydrogenase 13 (all-trans/9-cis) 19 -60247503, -60247503 BG163591 19q13.42 Hs.327631 9

binding

oxidoreductase activity

oxidation reduction

 
230259_at 0.207 5.056 2.424 2.828e-02 0.255 -3.664 C10orf125 chromosome 10 open reading frame 125 10 -135018784, -135018647 AI471699 10q26.3 Hs.155823 2

carbohydrate transport

 
214258_x_at -0.252 6.675 -2.424 2.828e-02 0.255 -3.664 KAT5 K(lysine) acetyltransferase 5 11 65236064 AA886971 11q13 Hs.397010 88

chromatin

chromatin binding

transcription coactivator activity

histone acetyltransferase activity

protein binding

nucleus

nucleolus

cytoplasm

double-strand break repair

chromatin assembly or disassembly

DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator

zinc ion binding

acyltransferase activity

chromatin modification

histone acetylation

transferase activity

androgen receptor signaling pathway

Piccolo NuA4 histone acetyltransferase complex

NuA4 histone acetyltransferase complex

regulation of growth

interspecies interaction between organisms

regulation of transcription

positive regulation of transcription, DNA-dependent

positive regulation of transcription, DNA-dependent

metal ion binding

perinuclear region of cytoplasm

androgen receptor binding

 
1555469_a_at -0.379 6.361 -2.423 2.831e-02 0.255 -3.665 CLASP2 cytoplasmic linker associated protein 2 3 -33512741 BC029035 3p22.3 Hs.108614 17

condensed chromosome kinetochore

protein binding

cytoplasm

Golgi apparatus

centrosome

spindle

kinetochore microtubule

cytoskeleton

cytoplasmic microtubule

cell cortex

negative regulation of microtubule depolymerization

cell cycle

mitosis

establishment or maintenance of cell polarity

galactoside 2-alpha-L-fucosyltransferase activity

regulation of microtubule polymerization or depolymerization

microtubule plus-end binding

cell division

 
200971_s_at 0.215 7.264 2.422 2.838e-02 0.256 -3.667 SERP1 stress-associated endoplasmic reticulum protein 1 3 -151742469 NM_014445 3q25.1 Hs.518326 Hs.709270 10

skeletal system development

endoplasmic reticulum

ribosome

glucose metabolic process

protein amino acid glycosylation

response to stress

plasma membrane organization

post-embryonic development

multicellular organismal aging

protein transport

membrane

integral to membrane

endoplasmic reticulum unfolded protein response

positive regulation of insulin secretion

positive regulation of translation

positive regulation of organ growth

muscle organ morphogenesis

positive regulation of growth hormone secretion

intracellular protein transmembrane transport

 
218559_s_at 0.554 8.284 2.422 2.839e-02 0.256 -3.667 MAFB v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian) 20 -38747930 NM_005461 20q11.2-q13.1 Hs.169487 29

transcription factor activity

nucleus

transcription factor complex

cytoplasm

segment specification

sensory organ development

respiratory gaseous exchange

transcription factor binding

rhombomere 5 development

rhombomere 6 development

brain segmentation

inner ear morphogenesis

sequence-specific DNA binding

negative regulation of erythrocyte differentiation

positive regulation of transcription from RNA polymerase II promoter

 
217025_s_at 0.298 6.030 2.421 2.840e-02 0.256 -3.667 DBN1 drebrin 1 5 -176816219, -176816219 AL110225 5q35.3 Hs.130316 32

actin binding

profilin binding

intracellular

cytoplasm

actin filament organization

multicellular organismal development

nervous system development

cell differentiation

dendrite

actomyosin

regulation of neuronal synaptic plasticity

regulation of dendrite development

 
206052_s_at -0.363 6.785 -2.421 2.841e-02 0.256 -3.668 SLBP stem-loop binding protein 4 -1664324 NM_006527 4p16.3 Hs.298345 27

mRNA binding

nucleus

nucleoplasm

cytoplasm

mRNA processing

histone mRNA 3'-end processing

ribonucleoprotein complex

 
230947_at 0.258 6.486 2.421 2.842e-02 0.256 -3.668 SEPT12 septin 12 16 -4767675 AI890919 16p13.3 Hs.126780 6

nucleotide binding

stress fiber

protein binding

protein binding

GTP binding

GTP binding

cytoplasm

spindle

cell cycle

GDP binding

midbody

septin complex

cleavage furrow

phosphoinositide binding

protein homodimerization activity

protein homodimerization activity

perinuclear region of cytoplasm

cell division

 
1554250_s_at 0.345 4.744 2.421 2.844e-02 0.256 -3.669 TRIM73 tripartite motif-containing 73 7 74862838 BC033812 7q11.23 Hs.632307 Hs.661254 5

protein binding

intracellular

zinc ion binding

metal ion binding

 
220342_x_at -0.330 5.882 -2.421 2.844e-02 0.256 -3.669 EDEM3 ER degradation enhancer, mannosidase alpha-like 3 1 -182926247 NM_017992 1q24-q25 Hs.523811 10

mannosyl-oligosaccharide 1,2-alpha-mannosidase activity

calcium ion binding

endoplasmic reticulum

endoplasmic reticulum lumen

response to unfolded protein

membrane

 
219423_x_at 0.405 4.158 2.420 2.845e-02 0.256 -3.669 TNFRSF25 tumor necrosis factor receptor superfamily, member 25 1 -6446757, -6443800 NM_003790 1p36.2 Hs.462529 30

receptor activity

tumor necrosis factor receptor activity

protein binding

extracellular region

cytosol

plasma membrane

integral to plasma membrane

cell surface receptor linked signal transduction

induction of apoptosis by extracellular signals

regulation of apoptosis

Cytokine-cytokine receptor interaction

219836_at 0.264 4.081 2.420 2.848e-02 0.256 -3.670 ZBED2 zinc finger, BED-type containing 2 3 -112794436 NM_024508 3q13.2 Hs.136912 3

DNA binding

zinc ion binding

metal ion binding

 
1561503_at -0.909 8.934 -2.420 2.848e-02 0.256 -3.670 MYLK4 myosin light chain kinase family, member 4 6 -2608861 AK096893 6p25.2 Hs.127830 4

nucleotide binding

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

transferase activity

 
228524_at 0.166 5.225 2.420 2.848e-02 0.256 -3.670 ADCK5 aarF domain containing kinase 5 8 145568538 BE856488 8q24.3 Hs.283374 4

protein serine/threonine kinase activity

membrane

integral to membrane

kinase activity

transferase activity

 
213108_at -0.682 7.743 -2.420 2.849e-02 0.256 -3.670 CAMK2A calcium/calmodulin-dependent protein kinase II alpha 5 -149579247 AW131813 5q32 Hs.716391 97

G1/S transition of mitotic cell cycle

nucleotide binding

calmodulin-dependent protein kinase activity

calmodulin binding

ATP binding

plasma membrane

calcium ion transport

transferase activity

cell junction

glutamate receptor binding

presynaptic membrane

synapse

protein amino acid autophosphorylation

regulation of neurotransmitter secretion

regulation of neuronal synaptic plasticity

positive regulation of NF-kappaB transcription factor activity

ErbB signaling pathway

Calcium signaling pathway

Wnt signaling pathway

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

GnRH signaling pathway

Melanogenesis

Glioma

218111_s_at -0.345 6.252 -2.420 2.849e-02 0.256 -3.670 CMAS cytidine monophosphate N-acetylneuraminic acid synthetase 12 22090425 NM_018686 12p12.1 Hs.311346 13

nucleus

N-acylneuraminate cytidylyltransferase activity

lipopolysaccharide biosynthetic process

transferase activity

nucleotidyltransferase activity

Amino sugar and nucleotide sugar metabolism

Metabolic pathways

238090_at 0.240 3.262 2.420 2.850e-02 0.256 -3.671 HGSNAT heparan-alpha-glucosaminide N-acetyltransferase 8 43114748 BE327420 8p11.1 Hs.600384 11

lysosome

acyltransferase activity

heparan-alpha-glucosaminide N-acetyltransferase activity

membrane

integral to membrane

transferase activity

glycosaminoglycan metabolic process

Glycosaminoglycan degradation

Metabolic pathways

Lysosome

226155_at -0.472 7.343 -2.419 2.851e-02 0.256 -3.671 FAM160B1 family with sequence similarity 160, member B1 10 116571492, 116571492 AB046820 10q25.3 Hs.192619 2    
1561383_at 0.197 2.426 2.419 2.853e-02 0.256 -3.672 LOC284661 hypothetical LOC284661 1 4371970 AK093498 1p36.32 Hs.278112 2    
231178_at 0.539 5.558 2.419 2.854e-02 0.256 -3.672 SPATA4 spermatogenesis associated 4 4 -177342718 BG150360 4q34.2 Hs.481235 4

molecular_function

cellular_component

cytoplasm

apoptosis

spermatogenesis

 
211628_x_at 0.308 12.146 2.419 2.854e-02 0.256 -3.672 FTHP1 ferritin, heavy polypeptide pseudogene 1 6   J04755 6p21.3-p12 Hs.453583 1    
212785_s_at -0.284 7.489 -2.419 2.856e-02 0.256 -3.672 LARP7 La ribonucleoprotein domain family, member 7 4 113777568, 113778060 AA160181 4q25 Hs.713663 11

nucleotide binding

RNA binding

nucleus

nucleoplasm

cytoplasm

Golgi apparatus

RNA processing

ribonucleoprotein complex

 
235970_at -0.390 5.684 -2.419 2.856e-02 0.256 -3.673 LCORL ligand dependent nuclear receptor corepressor-like 4 -17453941 AI807408 4p15.31 Hs.446201 Hs.661849 Hs.677572 9

DNA binding

RNA polymerase II transcription factor activity

nucleus

transcription from RNA polymerase II promoter

regulation of transcription

 
228075_x_at 0.273 6.925 2.418 2.857e-02 0.256 -3.673 TFB1M transcription factor B1, mitochondrial 6 -155620481 AI341648 6q25.1-q25.3 Hs.279908 15

rRNA modification

rRNA (adenine-N6,N6-)-dimethyltransferase activity

DNA binding

mitochondrion

methyltransferase activity

rRNA methyltransferase activity

transferase activity

mitochondrial nucleoid

regulation of transcription

 
224858_at -0.256 8.015 -2.418 2.857e-02 0.256 -3.673 ZDHHC5 zinc finger, DHHC-type containing 5 11 57192049 AK023130 11q12.1 Hs.27239 5

zinc ion binding

acyltransferase activity

membrane

integral to membrane

transferase activity

metal ion binding

 
243747_at 0.301 3.739 2.418 2.859e-02 0.257 -3.673 ZNF599 zinc finger protein 599 19 -39940818 AI222019 19q13.11 Hs.590961 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
209435_s_at 0.329 6.310 2.418 2.861e-02 0.257 -3.674 ARHGEF2 Rho/Rac guanine nucleotide exchange factor (GEF) 2 1 -154183253, -154183253 BC000265 1q21-q22 Hs.655209 28

cell morphogenesis

guanyl-nucleotide exchange factor activity

intracellular

cytoplasm

Golgi apparatus

spindle

microtubule

tight junction

intracellular protein transport

actin filament organization

negative regulation of microtubule depolymerization

cell cycle

mitosis

intracellular signaling cascade

microtubule binding

zinc ion binding

diacylglycerol binding

cell junction

Rac guanyl-nucleotide exchange factor activity

regulation of Rho protein signal transduction

regulation of cell proliferation

metal ion binding

Rac GTPase binding

cell division

Pathogenic Escherichia coli infection - EHEC

206625_at -0.767 6.668 -2.418 2.861e-02 0.257 -3.674 PRPH2 peripherin 2 (retinal degeneration, slow) 6 -42772310 NM_000322 6p21.2-p12.3 Hs.654489 57

protein binding

cell adhesion

visual perception

membrane

integral to membrane

response to stimulus

retina development in camera-type eye

Amyotrophic lateral sclerosis (ALS)

225373_at 0.243 6.153 2.417 2.863e-02 0.257 -3.674 C10orf54 chromosome 10 open reading frame 54 10 -73177318 BE271644 10q22.1 Hs.47382 9

receptor activity

membrane

integral to membrane

 
238886_at 0.241 4.886 2.417 2.863e-02 0.257 -3.675 TMED10 transmembrane emp24-like trafficking protein 10 (yeast) 14 -74667923 BF056141 14q24.3 Hs.74137 22

protein binding

microsome

ER-Golgi intermediate compartment

Golgi apparatus

cis-Golgi network

protein transport

membrane

integral to membrane

vesicle-mediated transport

melanosome

zymogen granule membrane

regulated secretory pathway

vesicle targeting, to, from or within Golgi

 
222774_s_at -0.509 4.425 -2.417 2.863e-02 0.257 -3.675 NETO2 neuropilin (NRP) and tolloid (TLL)-like 2 16 -45672942 AI335263 16q11 Hs.444046 6

receptor activity

membrane

integral to membrane

 
203420_at -0.237 8.181 -2.417 2.864e-02 0.257 -3.675 FAM8A1 family with sequence similarity 8, member A1 6 17708496 NM_016255 6p22-p23 Hs.95260 6

membrane

integral to membrane

 
222123_s_at 0.321 4.272 2.417 2.864e-02 0.257 -3.675 HIF3A hypoxia inducible factor 3, alpha subunit 19 51492144, 51493498, 51498715 AK021881 19q13.32 Hs.420830 12

DNA binding

signal transducer activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

signal transduction

transcription regulator activity

 
218526_s_at -0.321 6.841 -2.417 2.864e-02 0.257 -3.675 RANGRF RAN guanine nucleotide release factor 17 8132713 NM_014185 17p13 Hs.408233 6

guanyl-nucleotide exchange factor activity

nucleus

cytoplasm

protein transport

 
220650_s_at 0.210 5.813 2.417 2.865e-02 0.257 -3.675 SLC9A5 solute carrier family 9 (sodium/hydrogen exchanger), member 5 16 65840355 NM_004594 16q22.1 Hs.439650 11

cation transport

sodium ion transport

regulation of pH

antiporter activity

solute:hydrogen antiporter activity

sodium:hydrogen antiporter activity

membrane

integral to membrane

sodium ion binding

 
216843_x_at 0.220 6.238 2.417 2.867e-02 0.257 -3.676 PMS2L1 postmeiotic segregation increased 2-like 1 pseudogene 7 -99756198 U38964 7q22.1 Hs.634244 Hs.661055 Hs.709266 7

molecular_function

ATP binding

cellular_component

mismatch repair

biological_process

kinase activity

transferase activity

mismatched DNA binding

 
221736_at -0.233 7.053 -2.416 2.868e-02 0.257 -3.676 KIAA1219 KIAA1219 20 36534899 AA156777 20q11.23 Hs.655758 9

GTPase activator activity

protein binding

intracellular

regulation of small GTPase mediated signal transduction

 
210030_at 0.207 5.575 2.416 2.869e-02 0.257 -3.676 DOHH deoxyhypusine hydroxylase/monooxygenase 19 -3441819, -3441819 BC002817 19p13.3 Hs.515064 Hs.609012 8

iron ion binding

protein binding

cellular_component

peptidyl-lysine modification to hypusine

peptidyl-lysine modification to hypusine

deoxyhypusine monooxygenase activity

metal ion binding

oxidation reduction

 
206074_s_at -0.295 7.187 -2.416 2.869e-02 0.257 -3.677 HMGA1 high mobility group AT-hook 1 6 34312554, 34312627, 34314545 NM_002131 6p21 Hs.518805 Hs.703764 95

chromatin

AT DNA binding

transcription factor activity

nucleus

transcription factor complex

chromosome

cytosol

DNA unwinding during replication

nucleosome disassembly

loss of chromatin silencing

regulation of transcription, DNA-dependent

protein complex assembly

provirus integration

initiation of viral infection

enzyme binding

ligand-dependent nuclear receptor transcription coactivator activity

peroxisome proliferator activated receptor binding

interspecies interaction between organisms

positive regulation of transcription

retinoid X receptor binding

 
211970_x_at 0.430 10.771 2.416 2.870e-02 0.257 -3.677 ACTG1 actin, gamma 1 17 -77091593 BG026805 17q25 Hs.514581 102

nucleotide binding

structural constituent of cytoskeleton

ATP binding

cytoplasm

cytoskeleton

cell motion

identical protein binding

response to calcium ion

Focal adhesion

Adherens junction

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Vibrio cholerae infection

Pathogenic Escherichia coli infection - EHEC

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

207058_s_at -0.349 3.965 -2.416 2.871e-02 0.257 -3.677 PARK2 Parkinson disease (autosomal recessive, juvenile) 2, parkin 6 -161688579 NM_004562 6q25.2-q27 Hs.132954 Hs.716115 Hs.716151 Hs.716168 259

ubiquitin-protein ligase activity

protein binding

nucleus

cytoplasm

Golgi apparatus

central nervous system development

zinc ion binding

ligase activity

acid-amino acid ligase activity

protein ubiquitination during ubiquitin-dependent protein catabolic process

metal ion binding

perinuclear region of cytoplasm

Ubiquitin mediated proteolysis

Parkinson's disease

1554782_at -0.224 5.975 -2.416 2.872e-02 0.257 -3.677 C2orf19 chromosome 2 open reading frame 19 2   BC031945 2q37.3   3    
244109_at 0.298 4.104 2.416 2.872e-02 0.257 -3.677 WDR38 WD repeat domain 38 9 126655575 BF515709 9q33.3 Hs.343383 1    
221851_at 0.282 4.153 2.416 2.873e-02 0.257 -3.678 DCAF15 DDB1 and CUL4 associated factor 15 19 13924318 AI073983 19p13.12 Hs.443636 2

modification-dependent protein catabolic process

 
202528_at 0.270 4.983 2.415 2.874e-02 0.257 -3.678 GALE UDP-galactose-4-epimerase 1 -23994675, -23994675, -23994675 NM_000403 1p36-p35 Hs.632380 29

UDP-glucose 4-epimerase activity

UDP-glucose 4-epimerase activity

binding

cytosol

carbohydrate metabolic process

isomerase activity

galactose catabolic process

protein homodimerization activity

cellular metabolic process

coenzyme binding

Galactose metabolism

Amino sugar and nucleotide sugar metabolism

Metabolic pathways

219276_x_at -0.403 6.639 -2.415 2.875e-02 0.257 -3.678 C9orf82 chromosome 9 open reading frame 82 9 -26830682 NM_024828 9p21.2 Hs.178357 10    
223383_at -0.382 7.351 -2.415 2.875e-02 0.257 -3.678 ZNRF1 zinc and ring finger 1 16 73590415 AL136903 16q23.1 Hs.427284 11

protein binding

lysosome

endosome

zinc ion binding

membrane

ligase activity

modification-dependent protein catabolic process

cell junction

cytoplasmic vesicle

synapse

metal ion binding

 
228891_at -0.437 8.904 -2.415 2.875e-02 0.257 -3.678 SEMA4D sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D 9 -91181971, -91165525 N93399 9q22.2 Hs.494406 29

receptor activity

receptor binding

anti-apoptosis

immune response

cell adhesion

multicellular organismal development

nervous system development

membrane

integral to membrane

cell differentiation

positive regulation of axonogenesis

Axon guidance

201691_s_at -0.430 2.976 -2.415 2.876e-02 0.257 -3.679 TPD52 tumor protein D52 8 -81109659, -81109659 NM_005079 8q21 Hs.368433 27

calcium ion binding

cytoplasm

endoplasmic reticulum

anatomical structure morphogenesis

B cell differentiation

protein homodimerization activity

secretion

protein heterodimerization activity

perinuclear region of cytoplasm

 
210472_at 0.283 4.314 2.415 2.876e-02 0.257 -3.679 MT1G metallothionein 1G 16 -55258153 BC005311 16q13 Hs.433391 17

copper ion binding

protein binding

zinc ion binding

cadmium ion binding

metal ion binding

 
212983_at -0.311 7.749 -2.415 2.878e-02 0.257 -3.679 HRAS v-Ha-ras Harvey rat sarcoma viral oncogene homolog 11 -522241 NM_005343 11p15.5 Hs.37003 344

nucleotide binding

GTP binding

intracellular

membrane fraction

cytoplasm

Golgi apparatus

plasma membrane

plasma membrane

endocytosis

apoptosis

chemotaxis

cell surface receptor linked signal transduction

Ras protein signal transduction

Ras protein signal transduction

cell aging

protein C-terminus binding

positive regulation of cell proliferation

visual learning

organ morphogenesis

actin cytoskeleton organization

regulation of synaptic transmission, GABAergic

positive regulation of Rac protein signal transduction

negative regulation of neuron apoptosis

regulation of long-term neuronal synaptic plasticity

striated muscle cell differentiation

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

Endocytosis

Axon guidance

VEGF signaling pathway

Focal adhesion

Tight junction

Gap junction

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Long-term potentiation

Neurotrophin signaling pathway

Long-term depression

Regulation of actin cytoskeleton

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Pathways in cancer

Renal cell carcinoma

Endometrial cancer

Glioma

Prostate cancer

Thyroid cancer

Melanoma

Bladder cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Non-small cell lung cancer

1554478_a_at -0.454 5.292 -2.415 2.878e-02 0.257 -3.679 HEATR3 HEAT repeat containing 3 16 48657381 BC033077 16q12.1 Hs.313917 3

binding

 
215412_x_at 0.301 5.382 2.415 2.879e-02 0.257 -3.680 PMS2L2 postmeiotic segregation increased 2-like 2 pseudogene 7 -74815899, 72114615 AB017007 7q11-q22 Hs.292996 Hs.661055 Hs.675888 4

molecular_function

ATP binding

cellular_component

mismatch repair

biological_process

mismatched DNA binding

 
206227_at 0.581 8.100 2.415 2.879e-02 0.257 -3.680 CILP cartilage intermediate layer protein, nucleotide pyrophosphohydrolase 15 -63275389 NM_003613 15q22 Hs.442180 20

alkaline phosphatase activity

nucleotide diphosphatase activity

extracellular region

proteinaceous extracellular matrix

extracellular space

negative regulation of insulin-like growth factor receptor signaling pathway

extracellular matrix part

 
209067_s_at -0.291 9.175 -2.415 2.879e-02 0.257 -3.680 HNRPDL heterogeneous nuclear ribonucleoprotein D-like 4 -83563370 D89092 4q13-q21 Hs.527105 14

nucleotide binding

DNA binding

double-stranded DNA binding

single-stranded DNA binding

RNA binding

protein binding

nucleus

cytoplasm

RNA processing

poly(A) RNA binding

heterogeneous nuclear ribonucleoprotein complex

regulation of transcription

 
228519_x_at 0.211 7.307 2.415 2.879e-02 0.257 -3.680 CIRBP cold inducible RNA binding protein 19 1220266, 1220266 AW027567 19p13.3 Hs.634522 Hs.664127 17

nucleotide binding

RNA binding

protein binding

nucleus

nucleoplasm

response to cold

 
210460_s_at -0.371 10.033 -2.414 2.883e-02 0.257 -3.681 PSMD4 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 1 149493820 AB033605 1q21.3 Hs.505059 62

proteasome complex

protein binding

cytosol

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

1570627_at 0.226 4.230 2.414 2.883e-02 0.257 -3.681 TCEB3 transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A) 1 23942442 BC019949 1p36.1 Hs.15535 26

DNA binding

protein binding

nucleus

nucleoplasm

cytoplasm

regulation of transcription from RNA polymerase II promoter

integral to membrane

transcription regulator activity

regulation of transcription

 
205338_s_at 0.227 4.924 2.414 2.885e-02 0.257 -3.681 DCT dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2) 13 -93889841 NM_001922 13q32 Hs.301865 41

dopachrome isomerase activity

copper ion binding

microsome

cytosol

melanin biosynthetic process from tyrosine

metabolic process

zinc ion binding

epidermis development

membrane

integral to membrane

oxidoreductase activity

isomerase activity

melanosome

metal ion binding

pigmentation during development

cell development

Tyrosine metabolism

Metabolic pathways

Melanogenesis

213591_at 0.328 5.751 2.413 2.886e-02 0.257 -3.682 ALDH7A1 aldehyde dehydrogenase 7 family, member A1 5 -125906816 AU149534 5q31 Hs.483239 19

aldehyde dehydrogenase (NAD) activity

L-aminoadipate-semialdehyde dehydrogenase activity

cellular_component

mitochondrion

cellular aldehyde metabolic process

sensory perception of sound

oxidoreductase activity

oxidation reduction

Glycolysis / Gluconeogenesis

Ascorbate and aldarate metabolism

Fatty acid metabolism

Valine, leucine and isoleucine degradation

Lysine degradation

Arginine and proline metabolism

Histidine metabolism

Tryptophan metabolism

beta-Alanine metabolism

Glycerolipid metabolism

Pyruvate metabolism

Propanoate metabolism

3-Chloroacrylic acid degradation

Butanoate metabolism

Limonene and pinene degradation

Metabolic pathways

240767_x_at 0.226 6.060 2.413 2.886e-02 0.257 -3.682 RP11-470P4.2 hypothetical LOC100130426 9 78981498 AA398770 9q21.2 Hs.662256      
232259_s_at 0.249 4.425 2.413 2.886e-02 0.257 -3.682 LOC100009676 hypothetical LOC100009676 3 102877963 BC003066 3q12.3 Hs.715553 4    
213663_s_at -0.516 4.391 -2.412 2.891e-02 0.258 -3.683 FAM134B family with sequence similarity 134, member B 5 -16526146, -16526146 AI740515 5p15.1 Hs.481704 4

membrane

integral to membrane

 
225196_s_at 0.272 8.105 2.412 2.891e-02 0.258 -3.683 MRPS26 mitochondrial ribosomal protein S26 20 2974674 AF308301 20p13 Hs.18946 10

mitochondrion

mitochondrial small ribosomal subunit

ribosome

DNA damage response, detection of DNA damage

peptide biosynthetic process

 
239198_at -0.303 5.284 -2.412 2.892e-02 0.258 -3.684 EZH1 enhancer of zeste homolog 1 (Drosophila) 17 -38105818 BG470312 17q21.1-q21.3 Hs.194669 14

DNA binding

chromatin binding

nucleus

nucleolus

methyltransferase activity

anatomical structure morphogenesis

chromatin modification

transferase activity

histone-lysine N-methyltransferase activity

regulation of transcription

 
212327_at -0.278 9.537 -2.412 2.894e-02 0.258 -3.684 LIMCH1 LIM and calponin homology domains 1 4 41057560, 41309675 AK026815 4p13 Hs.335163 10

actin binding

zinc ion binding

actomyosin structure organization

metal ion binding

 
218939_at 0.243 6.114 2.412 2.895e-02 0.258 -3.685 LETM1 leucine zipper-EF-hand containing transmembrane protein 1 4 -1783003 NM_012318 4p16.3 Hs.120165 11

calcium ion binding

protein binding

mitochondrion

mitochondrial inner membrane

membrane

integral to membrane

cristae formation

 
218256_s_at -0.364 7.448 -2.411 2.897e-02 0.258 -3.685 NUP54 nucleoporin 54kDa 4 -77254840 NM_017426 4q21.1 Hs.430435 16

nucleocytoplasmic transporter activity

protein binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

protein targeting

nucleocytoplasmic transport

protein transport

membrane

mRNA transport

intracellular protein transmembrane transport

 
235866_at -0.181 4.911 -2.411 2.897e-02 0.258 -3.685 C9orf85 chromosome 9 open reading frame 85 9 73716242 AW339510 9q21.13 Hs.534190 4    
223524_s_at -0.823 7.397 -2.411 2.897e-02 0.258 -3.685 TMEM108 transmembrane protein 108 3 134239860 BC000568 3q21 Hs.191616 8

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
231321_s_at -0.209 3.243 -2.411 2.898e-02 0.258 -3.685 ACER3 alkaline ceramidase 3 11 76249564 AI681372 11q13.5 Hs.23862 5

Golgi membrane

endoplasmic reticulum

endoplasmic reticulum membrane

Golgi apparatus

ceramide metabolic process

membrane

integral to membrane

hydrolase activity

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides

Sphingolipid metabolism

202689_at 0.177 6.868 2.411 2.899e-02 0.258 -3.686 RBM15B RNA binding motif protein 15B 3 51403770 NM_013286 3p21.2 Hs.118738 6

nucleotide binding

regulation of alternative nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

nucleoplasm

nucleolus

mRNA processing

nucleocytoplasmic transport

RNA splicing

negative regulation of transcription

interspecies interaction between organisms

 
221386_at 0.212 2.859 2.411 2.901e-02 0.258 -3.686 OR3A2 olfactory receptor, family 3, subfamily A, member 2 17 -3127933 NM_002551 17p13.3 Hs.647414 6

receptor activity

olfactory receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

sensory perception of smell

response to stimulus

Olfactory transduction

223667_at -0.280 2.561 -2.411 2.901e-02 0.258 -3.686 FKBP7 FK506 binding protein 7 2 -179036638 AF092137 2q31.2 Hs.410378 7

peptidyl-prolyl cis-trans isomerase activity

calcium ion binding

protein binding

endoplasmic reticulum

endoplasmic reticulum lumen

protein folding

isomerase activity

 
242473_at 0.206 3.528 2.411 2.901e-02 0.258 -3.686 TRAF4 TNF receptor-associated factor 4 17 24095149 BF000155 17q11-q12 Hs.8375 22

DNA binding

protein binding

nucleus

cytoplasm

signal transduction

multicellular organismal development

zinc ion binding

regulation of apoptosis

metal ion binding

Pathways in cancer

Small cell lung cancer

241440_at 0.636 4.760 2.410 2.902e-02 0.258 -3.687 FLJ30375 hypothetical protein LOC440982 3   BF108881 3q24 Hs.535724 1    
207605_x_at 0.282 3.952 2.410 2.903e-02 0.258 -3.687 ZNF117 zinc finger protein 117 7 -64072264 NM_024498 7q11.21 Hs.250693 5

molecular_function

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

biological_process

zinc ion binding

metal ion binding

 
211119_at -0.563 3.249 -2.410 2.904e-02 0.258 -3.687 ESR2 estrogen receptor 2 (ER beta) 14 -63769499, -63763503, -63763503 AF060555 14q23.2 Hs.525392 Hs.660607 488

transcription factor activity

transcription coactivator activity

steroid binding

protein binding

nucleus

mitochondrion

regulation of transcription, DNA-dependent

signal transduction

cell-cell signaling

zinc ion binding

estrogen receptor activity

negative regulation of cell growth

estrogen receptor signaling pathway

sequence-specific DNA binding

metal ion binding

receptor antagonist activity

 
227536_at -0.301 7.368 -2.410 2.905e-02 0.258 -3.688 ZC3H13 zinc finger CCCH-type containing 13 13 -45434314 AI472196 13q14.13 Hs.136102 11

nucleic acid binding

zinc ion binding

metal ion binding

 
219570_at -0.260 6.529 -2.410 2.905e-02 0.258 -3.688 KIF16B kinesin family member 16B 20 -16200748 NM_024704 20p11.23 Hs.101774 10

nucleotide binding

microtubule motor activity

protein binding

ATP binding

microtubule

microtubule-based movement

cell communication

phosphoinositide binding

 
201504_s_at -0.310 6.247 -2.410 2.906e-02 0.258 -3.688 TSN translin 2 122229590 AI435302 2q21.1 Hs.75066 28

nucleus

cytoplasm

DNA recombination

sequence-specific DNA binding

 
1568640_at 0.267 4.557 2.410 2.907e-02 0.258 -3.688 ASPRV1 aspartic peptidase, retroviral-like 1 2 -70040727 BC012788 2p13.3 Hs.516253 6

aspartic-type endopeptidase activity

proteolysis

peptidase activity

membrane

integral to membrane

skin development

protein maturation by peptide bond cleavage

 
223193_x_at 0.276 10.789 2.410 2.907e-02 0.258 -3.688 FAM162A family with sequence similarity 162, member A 3 123585712 AF201944 3q21.1 Hs.584881 8

membrane

integral to membrane

 
209274_s_at -0.378 10.231 -2.409 2.908e-02 0.258 -3.688 ISCA1 iron-sulfur cluster assembly 1 homolog (S. cerevisiae) 9 -88069282 BC002675 9q21.33 Hs.449291 9

structural molecule activity

iron ion binding

mitochondrion

iron-sulfur cluster assembly

metal ion binding

iron-sulfur cluster binding

 
220512_at 0.195 4.901 2.409 2.909e-02 0.258 -3.689 DLC1 deleted in liver cancer 1 8 -13116452, -12985242, -12985242 NM_024767 8p22 Hs.134296 48

neural tube closure

heart morphogenesis

GTPase activator activity

protein binding

intracellular

nucleus

cytoplasm

caveola

focal adhesion

induction of apoptosis

activation of caspase activity

signal transduction

negative regulation of cell proliferation

negative regulation of cell proliferation

regulation of cell shape

hindbrain morphogenesis

negative regulation of cell migration

negative regulation of cell migration

Rac GTPase activator activity

forebrain development

regulation of actin cytoskeleton organization

negative regulation of Rho protein signal transduction

positive regulation of protein amino acid dephosphorylation

SH2 domain binding

focal adhesion formation

negative regulation of stress fiber formation

 
213090_s_at -0.330 6.265 -2.409 2.911e-02 0.258 -3.689 TAF4 TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa 20 -59983248 AI744029 20q13.33 Hs.18857 36

transcription factor activity

transcription coactivator activity

protein binding

nucleus

transcription factor TFIID complex

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

transcription initiation from RNA polymerase II promoter

general RNA polymerase II transcription factor activity

transcription initiation factor activity

transcription factor TFTC complex

interspecies interaction between organisms

Basal transcription factors

Huntington's disease

218105_s_at 0.377 7.228 2.409 2.912e-02 0.258 -3.690 MRPL4 mitochondrial ribosomal protein L4 19 10223639, 10223639 NM_015956 19p13.2 Hs.279652 10

structural constituent of ribosome

intracellular

mitochondrion

ribosome

translation

 
227409_at -0.389 6.106 -2.409 2.912e-02 0.258 -3.690 PPP1R3E protein phosphatase 1, regulatory (inhibitor) subunit 3E 14 -22834952 AA167748 14q11.2 Hs.601513 Hs.672733 3

carbohydrate metabolic process

glycogen metabolic process

 
202771_at 0.299 4.516 2.409 2.913e-02 0.258 -3.690 FAM38A family with sequence similarity 38, member A 16 -87309088 NM_014745 16q24.3 Hs.513807 Hs.592074 8

endoplasmic reticulum

membrane

integral to membrane

ER-Golgi intermediate compartment membrane

 
214966_at 0.292 4.938 2.408 2.915e-02 0.258 -3.691 GRIK5 glutamate receptor, ionotropic, kainate 5 19 -47194312 S40369 19q13.2 Hs.367799 17

receptor activity

ion channel activity

extracellular-glutamate-gated ion channel activity

plasma membrane

ion transport

synaptic transmission

kainate selective glutamate receptor activity

integral to membrane

cell junction

synapse

postsynaptic membrane

Neuroactive ligand-receptor interaction

1555789_s_at -0.266 6.167 -2.408 2.915e-02 0.258 -3.691 PHF23 PHD finger protein 23 17 -7079070 AY099328 17p13.1 Hs.647432 4

protein binding

zinc ion binding

metal ion binding

 
212338_at 0.399 2.782 2.408 2.916e-02 0.258 -3.691 MYO1D myosin ID 17 -27843740 AA621962 17q11-q12 Hs.658000 7

nucleotide binding

motor activity

actin binding

calmodulin binding

ATP binding

myosin complex

 
240147_at 0.263 5.635 2.408 2.918e-02 0.258 -3.692 C7orf50 chromosome 7 open reading frame 50 7 -1003148 AA830578 7p22.3 Hs.653258 5    
201027_s_at -0.283 7.408 -2.408 2.919e-02 0.258 -3.692 EIF5B eukaryotic translation initiation factor 5B 2 99320265 NM_015904 2q11.2 Hs.158688 15

nucleotide binding

translation initiation factor activity

translation initiation factor activity

GTPase activity

protein binding

GTP binding

cytoplasm

translation

regulation of translational initiation

regulation of translational initiation

 
214020_x_at 0.273 6.182 2.407 2.921e-02 0.259 -3.692 ITGB5 integrin, beta 5 3 -125964484 BE138575 3q21.2 Hs.536663 55

receptor activity

protein binding

cell adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

integrin complex

membrane

integral to membrane

Focal adhesion

ECM-receptor interaction

Regulation of actin cytoskeleton

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

229887_at 0.200 6.288 2.407 2.921e-02 0.259 -3.693 ALS2CL ALS2 C-terminal like 3 -46685682, -46685682 AI672049 3p21.31 Hs.517937 7

GTPase activator activity

cytoplasm

endosome organization

protein localization

cytoplasmic membrane-bounded vesicle

Rab GTPase binding

identical protein binding

 
222027_at -0.303 5.243 -2.407 2.922e-02 0.259 -3.693 NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 1 -203948569 AW515443 1q32.1 Hs.213061 Hs.652429 19

nucleus

 
219782_s_at -0.231 3.378 -2.407 2.922e-02 0.259 -3.693 ZNF771 zinc finger protein 771 16 30326235 NM_016643 16p11.2 Hs.148584 2

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
202293_at -0.586 6.084 -2.407 2.923e-02 0.259 -3.693 STAG1 stromal antigen 1 3 -137538688 AW168948 3q22.3 Hs.412586 11

chromatin

protein binding

nucleus

cell cycle

chromosome segregation

mitosis

cell division

Cell cycle

235644_at -0.334 2.679 -2.406 2.926e-02 0.259 -3.694 CCDC138 coiled-coil domain containing 138 2 108769650 BF213953 2q12.3 Hs.362702 2    
203582_s_at -0.267 7.410 -2.406 2.926e-02 0.259 -3.694 RAB4A RAB4A, member RAS oncogene family 1 227473501 NM_004578 1q42-q43 Hs.296169 43

nucleotide binding

GTPase activity

GTP binding

cytoplasm

small GTPase mediated signal transduction

protein transport

membrane

Endocytosis

201737_s_at -0.609 8.084 -2.406 2.927e-02 0.259 -3.694 MARCH6 membrane-associated ring finger (C3HC4) 6 5 10406827 NM_005885 5p15.2 Hs.432862 8

endoplasmic reticulum

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
204196_x_at 0.218 3.483 2.406 2.928e-02 0.259 -3.695 PKNOX1 PBX/knotted 1 homeobox 1 21 43267711 NM_004571 21q22.3 Hs.431043 25

angiogenesis

specific RNA polymerase II transcription factor activity

RNA polymerase II transcription factor activity, enhancer binding

protein binding

nucleus

transcription factor complex

cytoplasm

hemopoiesis

T cell differentiation

erythrocyte differentiation

camera-type eye development

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

protein heterodimerization activity

 
219572_at 0.211 5.622 2.406 2.928e-02 0.259 -3.695 CADPS2 Ca++-dependent secretion activator 2 7 -121745713 NM_017954 7q31.3 Hs.708214 12

calcium ion binding

exocytosis

lipid binding

protein transport

membrane

cell junction

cytoplasmic vesicle

synapse

 
214953_s_at 0.358 6.705 2.406 2.928e-02 0.259 -3.695 APP amyloid beta (A4) precursor protein 21 -26174732 X06989 21q21.2 21q21.3 Hs.434980 835

serine-type endopeptidase inhibitor activity

serine-type endopeptidase inhibitor activity

iron ion binding

copper ion binding

extracellular region

extracellular region

cytoplasm

Golgi apparatus

plasma membrane

integral to plasma membrane

coated pit

cellular copper ion homeostasis

endocytosis

cell adhesion

Notch signaling pathway

heparin binding

cell death

zinc ion binding

cell surface

peptidase inhibitor activity

platelet alpha granule lumen

acetylcholine receptor binding

identical protein binding

metal ion binding

neuromuscular process

neuron apoptosis

Alzheimer's disease

227588_s_at 0.214 4.120 2.406 2.930e-02 0.259 -3.695 C7orf20 chromosome 7 open reading frame 20 7 882716 AA058854 7p22.3 Hs.107387 9

molecular_function

protein binding

cellular_component

biological_process

 
243346_at -0.374 9.852 -2.406 2.930e-02 0.259 -3.695 LMOD3 leiomodin 3 (fetal) 3 -69238728 BF109621 3p14.1 Hs.350621 9

tropomyosin binding

cytoplasm

cytoskeleton

 
227313_at 0.259 6.746 2.405 2.931e-02 0.259 -3.696 CNPY4 canopy 4 homolog (zebrafish) 7 99555200 AI870866 7q22.1 Hs.632293 5

extracellular region

 
216593_s_at -0.227 6.118 -2.405 2.932e-02 0.259 -3.696 PIGC phosphatidylinositol glycan anchor biosynthesis, class C 1 -170677219 AB000359 1q23-q25 Hs.188456 12

endoplasmic reticulum

endoplasmic reticulum membrane

membrane

integral to membrane

preassembly of GPI anchor in ER membrane

transferase activity, transferring glycosyl groups

phosphatidylinositol N-acetylglucosaminyltransferase activity

Glycosylphosphatidylinositol(GPI)-anchor biosynthesis

Metabolic pathways

229478_x_at 0.277 3.137 2.405 2.934e-02 0.259 -3.697 BIVM basic, immunoglobulin-like variable motif containing 13 102249399 AW274311 13q32-q33.1 Hs.288809 6

nucleus

cytoplasm

 
203977_at 0.202 7.185 2.405 2.935e-02 0.259 -3.697 TAZ tafazzin X 153293070 NM_000116 Xq28 Hs.409911 35

cytoplasm

mitochondrion

mitochondrion

muscle contraction

skeletal muscle tissue development

metabolic process

acyltransferase activity

membrane

integral to membrane

hemopoiesis

cardiolipin biosynthetic process

mitochondrial respiratory chain complex I assembly

cristae formation

mitochondrial ATP synthesis coupled electron transport

1-acylglycerophosphocholine O-acyltransferase activity

cardiac muscle tissue development

cardiac muscle contraction

 
1555500_s_at 0.244 6.004 2.405 2.936e-02 0.259 -3.697 SLC2A4RG SLC2A4 regulator 20 61841654 BC013687 20q13.33 Hs.435126 10

transcription factor activity

intracellular

nucleus

cytoplasm

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
214211_at 0.551 9.115 2.404 2.937e-02 0.259 -3.697 FTH1 ferritin, heavy polypeptide 1 11 -61488332 AA083483 11q13 Hs.524910 Hs.645560 55

ferroxidase activity

protein binding

iron ion transport

intracellular sequestering of iron ion

immune response

intracellular ferritin complex

ferric iron binding

negative regulation of cell proliferation

oxidoreductase activity

oxidation reduction

Porphyrin and chlorophyll metabolism

209398_at -0.467 8.565 -2.404 2.938e-02 0.259 -3.698 HIST1H1C histone cluster 1, H1c 6 -26163946 BC002649 6p21.3 Hs.7644 17

nucleosome

DNA binding

protein binding

nucleus

chromosome

nucleosome assembly

nucleosome positioning

 
217074_at 0.239 5.303 2.404 2.938e-02 0.259 -3.698 SMOX spermine oxidase 20 4077449 AK025938 20p13 Hs.433337 17

cytoplasm

electron carrier activity

oxidoreductase activity

spermine catabolic process

polyamine oxidase activity

oxidation reduction

 
206896_s_at 0.410 5.585 2.404 2.940e-02 0.259 -3.698 GNG7 guanine nucleotide binding protein (G protein), gamma 7 19 -2462217 NM_005145 19p13.3 Hs.515544 12

behavioral fear response

signal transducer activity

heterotrimeric G-protein complex

plasma membrane

signal transduction

receptor guanylyl cyclase signaling pathway

locomotory behavior

regulation of G-protein coupled receptor protein signaling pathway

hormone-mediated signaling

Chemokine signaling pathway

224926_at -0.435 8.013 -2.404 2.941e-02 0.259 -3.699 EXOC4 exocyst complex component 4 7 132588362, 132588362 AB051486 7q31 Hs.321273 30

exocyst

cytoplasm

vesicle docking during exocytosis

protein transport

protein N-terminus binding

Tight junction

225353_s_at 0.675 5.245 2.403 2.945e-02 0.260 -3.700 C1QC complement component 1, q subcomponent, C chain 1 22842704 AI184968 1p36.11 Hs.467753 43

extracellular region

extracellular region

nucleus

nucleolus

cytoplasm

complement activation, classical pathway

negative regulation of granulocyte differentiation

innate immune response

negative regulation of macrophage differentiation

Complement and coagulation cascades

Prion diseases

Systemic lupus erythematosus

1598_g_at 0.340 8.594 2.403 2.945e-02 0.260 -3.700 GAS6 growth arrest-specific 6 13 113546896, 113574925, 113577228 L13720 13q34 Hs.646346 45

receptor binding

calcium ion binding

extracellular region

signal transduction

cell proliferation

organ regeneration

regulation of growth

 
204332_s_at -0.427 6.159 -2.403 2.947e-02 0.260 -3.700 AGA aspartylglucosaminidase 4 -178588917 M64073 4q32-q33 Hs.207776 36

N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity

lysosome

protein deglycosylation

hydrolase activity

protein maturation

Other glycan degradation

Lysosome

227892_at -0.594 9.418 -2.403 2.947e-02 0.260 -3.701 PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit 1 56883577 AA855042 1p31 Hs.437039 67

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

nucleoplasm

cytosol

protein amino acid phosphorylation

fatty acid biosynthetic process

cholesterol biosynthetic process

signal transduction

transferase activity

regulation of fatty acid oxidation

Regulation of autophagy

mTOR signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

Hypertrophic cardiomyopathy (HCM)

233541_at 0.184 6.007 2.403 2.948e-02 0.260 -3.701 LOC644714 hypothetical protein LOC644714 3   AK026206 3p21.31 Hs.712889      
200053_at 0.248 10.154 2.402 2.948e-02 0.260 -3.701 SPAG7 sperm associated antigen 7 17 -4803243 NM_004890 17p13.2 Hs.90436 7

nucleic acid binding

protein binding

nucleus

 
1553363_at 0.227 4.519 2.402 2.948e-02 0.260 -3.701 C6orf195 chromosome 6 open reading frame 195 6 -2567970 NM_152554 6p25.2 Hs.680574 4    
204058_at 0.421 9.331 2.402 2.949e-02 0.260 -3.701 ME1 malic enzyme 1, NADP(+)-dependent, cytosolic 6 -83976828 AL049699 6q12 Hs.21160 24

malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity

malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity

binding

nucleus

nucleolus

cytoplasm

cytosol

carbohydrate metabolic process

malate metabolic process

NADP biosynthetic process

electron carrier activity

response to hormone stimulus

response to carbohydrate stimulus

oxidoreductase activity

manganese ion binding

ADP binding

metal ion binding

NADP or NADPH binding

NAD or NADH binding

oxidation reduction

Pyruvate metabolism

Carbon fixation in photosynthetic organisms

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Metabolic pathways

PPAR signaling pathway

238365_s_at 0.255 2.443 2.402 2.949e-02 0.260 -3.701 C1orf228 chromosome 1 open reading frame 228 1 44912980 AI638342 1p34.1 Hs.173679 1

binding

 
201773_at -0.338 8.216 -2.402 2.950e-02 0.260 -3.701 ADNP activity-dependent neuroprotector homeobox 20 -48940289 NM_015339 20q13.13 Hs.570355 10

chromatin binding

transcription factor activity

dolichyl-phosphate beta-D-mannosyltransferase activity

protein binding

extracellular space

intracellular

nucleus

nucleolus

regulation of transcription, DNA-dependent

GPI anchor biosynthetic process

zinc ion binding

dolichol metabolic process

negative regulation of neuron apoptosis

sequence-specific DNA binding

metal ion binding

 
206999_at -0.378 3.048 -2.402 2.951e-02 0.260 -3.702 IL12RB2 interleukin 12 receptor, beta 2 1 67545634 NM_001559 1p31.3-p31.2 Hs.479347 41

receptor activity

cytokine receptor activity

integral to plasma membrane

cell surface receptor linked signal transduction

positive regulation of cell proliferation

membrane

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

204042_at -0.418 6.999 -2.402 2.951e-02 0.260 -3.702 WASF3 WAS protein family, member 3 13 26029839 AB020707 13q12 Hs.635221 19

actin binding

cytoplasm

cytoskeleton

protein complex assembly

actin filament polymerization

Adherens junction

Fc gamma R-mediated phagocytosis

230409_at 0.230 4.023 2.402 2.952e-02 0.260 -3.702 MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 1 113734997, 113734997 AI738585 1p12-p11.2 Hs.486189 13

nucleotide binding

protein binding

ATP binding

nucleus

plasma membrane

tight junction

cell junction

interspecies interaction between organisms

Tight junction

238035_at -0.268 6.181 -2.402 2.952e-02 0.260 -3.702 SP3 Sp3 transcription factor 2 -174481504, -174481503 N66313 2q31 Hs.531587 126

ossification

natural killer cell differentiation

trophectodermal cell differentiation

liver development

embryonic placenta development

DNA binding

chromatin binding

double-stranded DNA binding

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

transcription activator activity

transcription repressor activity

B cell differentiation

T cell differentiation

megakaryocyte differentiation

monocyte differentiation

lung development

granulocyte differentiation

enucleate erythrocyte differentiation

metal ion binding

embryonic camera-type eye morphogenesis

embryonic skeletal system development

embryonic process involved in female pregnancy

definitive hemopoiesis

 
227219_x_at 0.233 7.879 2.402 2.953e-02 0.260 -3.702 MAP1LC3A microtubule-associated protein 1 light chain 3 alpha 20 32598352, 32610179 BE857601 20cen-q13 Hs.632273 29

autophagic vacuole formation

protein binding

cytoplasm

autophagic vacuole

cytosol

microtubule

autophagy

phosphatidylethanolamine binding

modification-dependent protein catabolic process

organelle membrane

cytoplasmic vesicle

 
212840_at -0.307 3.917 -2.401 2.956e-02 0.260 -3.703 UBXN7 UBX domain protein 7 3 -197564765 BG339560 3q29 Hs.518524 6

protein binding

 
219835_at 0.225 5.285 2.401 2.957e-02 0.260 -3.703 PRDM8 PR domain containing 8 4 81325447, 81337680 NM_020226 4q21 Hs.373642 4

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
234317_s_at 0.337 5.728 2.401 2.959e-02 0.260 -3.704 STOX2 storkhead box 2 4 185063502 AL390216 4q35.1 Hs.21958 Hs.696657 3    
203255_at -0.381 6.883 -2.400 2.962e-02 0.260 -3.705 FBXO11 F-box protein 11 2 -47899228, -47893491, -47887562 NM_018693 2p16.3 Hs.352677 12

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

nucleus

cytoplasm

protein modification process

ubiquitin-dependent protein catabolic process

zinc ion binding

histone-arginine N-methyltransferase activity

protein ubiquitination

peptidyl-arginine C-methyltransferase activity

metal ion binding

 
218020_s_at -0.288 7.765 -2.400 2.963e-02 0.260 -3.705 ZFAND3 zinc finger, AN1-type domain 3 6 37895284 NM_021943 6pter-p22.3 Hs.36959 8

DNA binding

zinc ion binding

metal ion binding

 
206602_s_at 0.304 3.488 2.400 2.963e-02 0.260 -3.705 HOXD3 homeobox D3 2 176737050 NM_006898 2q31.1 Hs.93574 25

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anterior/posterior pattern formation

glossopharyngeal nerve morphogenesis

thyroid gland development

sequence-specific DNA binding

positive regulation of neuron differentiation

embryonic skeletal system morphogenesis

cartilage development

 
236870_at 0.243 2.543 2.400 2.963e-02 0.260 -3.705 IQCF3 IQ motif containing F3 3 51837608 AW958766 3p21.2 Hs.254808 2    
214733_s_at -0.208 6.482 -2.400 2.964e-02 0.260 -3.705 YIPF1 Yip1 domain family, member 1 1 -54089993 AL031427 1p33-p32.1 Hs.11923 9

membrane

integral to membrane

transport vesicle

 
203811_s_at -0.922 7.287 -2.400 2.964e-02 0.260 -3.706 DNAJB4 DnaJ (Hsp40) homolog, subfamily B, member 4 1 78243223 NM_007034 1p31.1 Hs.13852 11

protein folding

response to unfolded protein

response to heat

heat shock protein binding

unfolded protein binding

 
206224_at 0.156 5.144 2.400 2.964e-02 0.260 -3.706 CST1 cystatin SN 20 -23676189 NM_001898 20p11.21 Hs.123114 22

cysteine-type endopeptidase inhibitor activity

extracellular region

peptidase inhibitor activity

 
204487_s_at 0.322 5.465 2.400 2.964e-02 0.260 -3.706 KCNQ1 potassium voltage-gated channel, KQT-like subfamily, member 1 11 2422796, 2439259 NM_000218 11p15.5 Hs.95162 203

voltage-gated ion channel activity

delayed rectifier potassium channel activity

protein binding

plasma membrane

ion transport

potassium ion transport

muscle contraction

sensory perception of sound

blood circulation

regulation of heart contraction

voltage-gated potassium channel complex

integral to membrane

potassium ion binding

cytoplasmic vesicle

membrane depolarization

Vibrio cholerae infection

208843_s_at -0.245 8.512 -2.400 2.965e-02 0.260 -3.706 GORASP2 golgi reassembly stacking protein 2, 55kDa 2 171493956 BC001408 2q31.1-q31.2 Hs.431317 16

protein binding

Golgi apparatus

Golgi medial cisterna

Golgi organization

membrane

 
202058_s_at -0.592 5.315 -2.399 2.967e-02 0.260 -3.706 KPNA1 karyopherin alpha 1 (importin alpha 5) 3 -123623437 BC002374 3q21 Hs.161008 92

regulation of DNA recombination

protein binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

cytosol

NLS-bearing substrate import into nucleus

intracellular protein transport

nuclear localization sequence binding

protein transporter activity

interspecies interaction between organisms

 
229325_at -0.333 6.501 -2.399 2.968e-02 0.260 -3.707 ZZZ3 zinc finger, ZZ-type containing 3 1 -77802777 AW515772 1p31.1 Hs.480506 2

DNA binding

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
207397_s_at 0.203 3.123 2.398 2.972e-02 0.260 -3.708 HOXD13 homeobox D13 2 176665777 NM_000523 2q31.1 Hs.152414 37

skeletal system development

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

multicellular organismal development

sequence-specific DNA binding

 
220254_at -0.340 3.707 -2.398 2.972e-02 0.260 -3.708 LRP12 low density lipoprotein-related protein 12 8 -105570642 NM_013437 8q22.2-q23.1 Hs.600630 8

receptor activity

low-density lipoprotein receptor activity

protein binding

nucleolus

cytoplasm

plasma membrane

integral to plasma membrane

coated pit

endocytosis

signal transduction

regulation of growth

 
235060_at -0.327 7.900 -2.398 2.975e-02 0.260 -3.709 LOC100190986 hypothetical LOC100190986 16 -21783123, -21350846, 22423270 AL047052 16p12.2 Hs.611072 Hs.648439 2    
1557528_at -0.286 4.025 -2.398 2.975e-02 0.260 -3.709 STRADA STE20-related kinase adaptor alpha 17 -59133926 AI493734 17q23.3 Hs.514402 15

nucleotide binding

protein kinase activity

protein binding

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

protein export from nucleus

cell cycle

transferase activity

activation of protein kinase activity

mTOR signaling pathway

225463_x_at -0.289 6.880 -2.398 2.976e-02 0.260 -3.709 GPR89A G protein-coupled receptor 89A 1 -144475951 BF941168 1q21.1 Hs.559115 Hs.645432 10

signal transducer activity

membrane

integral to membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

 
209654_at -0.358 7.434 -2.398 2.976e-02 0.260 -3.709 KIAA0947 KIAA0947 5 5475806 BC004902 5p15.32 Hs.449296 3    
217722_s_at -0.220 11.404 -2.397 2.977e-02 0.260 -3.710 NGRN neugrin, neurite outgrowth associated 15 88609898 NM_016645 15q26.1 Hs.715556 Hs.716378 2

molecular_function

nucleus

multicellular organismal development

nervous system development

neuron differentiation

 
217772_s_at 0.309 9.743 2.397 2.978e-02 0.260 -3.710 MTCH2 mitochondrial carrier homolog 2 (C. elegans) 11 -47595434 NM_014342 11p11.2 Hs.269944 9

binding

mitochondrion

mitochondrial inner membrane

transport

membrane

integral to membrane

 
206669_at 0.215 3.949 2.397 2.978e-02 0.260 -3.710 GAD1 glutamate decarboxylase 1 (brain, 67kDa) 2 171381445, 171381445 NM_013445 2q31 Hs.420036 58

glutamate decarboxylase activity

protein binding

intracellular

glutamate decarboxylation to succinate

synaptic transmission

vesicle membrane

lyase activity

protein-pyridoxal-5-phosphate linkage

carboxylic acid metabolic process

pyridoxal phosphate binding

neurotransmitter biosynthetic process

Alanine, aspartate and glutamate metabolism

beta-Alanine metabolism

Taurine and hypotaurine metabolism

Butanoate metabolism

Metabolic pathways

Type I diabetes mellitus

218493_at 0.369 9.429 2.397 2.978e-02 0.260 -3.710 SNRNP25 small nuclear ribonucleoprotein 25kDa (U11/U12) 16 43828 NM_024571 16p13.3 Hs.15277 7

nucleus

U12-type spliceosomal complex

mRNA processing

RNA splicing

 
229241_at 0.248 6.996 2.397 2.979e-02 0.260 -3.710 LDHD lactate dehydrogenase D 16 -73703258 AI623801 16q23.1 Hs.380929 5

D-lactate dehydrogenase (cytochrome) activity

protein binding

protein binding

mitochondrion

oxidoreductase activity

FAD binding

oxidation reduction

Pyruvate metabolism

205226_at 0.458 6.524 2.397 2.979e-02 0.260 -3.710 PDGFRL platelet-derived growth factor receptor-like 8 17478985 NM_006207 8p22-p21.3 Hs.458573 4

platelet activating factor receptor activity

platelet-derived growth factor beta-receptor activity

extracellular region

biological_process

 
1564299_at -0.210 3.053 -2.397 2.981e-02 0.260 -3.711 LOC100127940 hypothetical LOC100127940 7   AK090626 7p22.3 Hs.638549 1    
213772_s_at -0.241 6.653 -2.397 2.982e-02 0.260 -3.711 GGA2 golgi associated, gamma adaptin ear containing, ARF binding protein 2 16 -23383143 BF196572 16p12 Hs.460336 37

protein binding

intracellular

endosome

trans-Golgi network

intracellular protein transport

membrane

vesicle-mediated transport

membrane coat

clathrin adaptor complex

ADP-ribosylation factor binding

Lysosome

1561847_at 0.292 4.429 2.397 2.982e-02 0.260 -3.711 NUDT17 nudix (nucleoside diphosphate linked moiety X)-type motif 17 1 -144297851 AA481984 1q21.1 Hs.585066 4

magnesium ion binding

mitochondrion

hydrolase activity

manganese ion binding

 
205462_s_at 0.393 4.700 2.396 2.983e-02 0.261 -3.711 HPCAL1 hippocalcin-like 1 2 10360490, 10361276 NM_002149 2p25.1 Hs.467696 Hs.580427 20

calcium ion binding

protein binding

 
240412_s_at 0.259 4.025 2.396 2.984e-02 0.261 -3.711 HEATR7B2 HEAT repeat family member 7B2 5 -41033878 AA399262 5p13.1 Hs.97714 3

binding

 
218473_s_at 0.204 6.537 2.396 2.985e-02 0.261 -3.712 GLT25D1 glycosyltransferase 25 domain containing 1 19 17527510 NM_024656 19p13.11 Hs.418795 10

endoplasmic reticulum

endoplasmic reticulum lumen

lipopolysaccharide biosynthetic process

transferase activity, transferring glycosyl groups

 
201490_s_at 0.432 8.502 2.396 2.985e-02 0.261 -3.712 PPIF peptidylprolyl isomerase F 10 80777225 NM_005729 10q22-q23 Hs.381072 13

peptidyl-prolyl cis-trans isomerase activity

membrane fraction

mitochondrion

mitochondrial matrix

protein folding

isomerase activity

peptide binding

 
242179_s_at 0.250 4.180 2.396 2.986e-02 0.261 -3.712 TSPAN16 tetraspanin 16 19 11267823 AI688554 19p13.2 Hs.579784 2

membrane

integral to membrane

 
37577_at 0.184 3.649 2.396 2.986e-02 0.261 -3.712 ARHGAP19 Rho GTPase activating protein 19 10 -98971919 U79256 10q24.1 Hs.80305 8

GTPase activator activity

intracellular

nucleus

signal transduction

 
202183_s_at 0.252 7.362 2.396 2.988e-02 0.261 -3.713 KIF22 kinesin family member 22 16 89374 NM_007317 16p11.2 Hs.613351 25

nucleotide binding

kinetochore

DNA binding

microtubule motor activity

protein binding

ATP binding

nucleus

microtubule

DNA repair

microtubule-based movement

mitosis

 
208018_s_at 0.254 4.703 2.395 2.989e-02 0.261 -3.713 HCK hemopoietic cell kinase 20 30103717 NM_002110 20q11-q12 Hs.655210 125

nucleotide binding

non-membrane spanning protein tyrosine kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

mesoderm development

membrane

transferase activity

interspecies interaction between organisms

Chemokine signaling pathway

Fc gamma R-mediated phagocytosis

224790_at 0.293 4.969 2.395 2.991e-02 0.261 -3.713 ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 8 -131133534 AI023398 8q24.1-q24.2 Hs.655552 19

protein binding

cytoplasm

ARF GTPase activator activity

zinc ion binding

membrane

regulation of ARF GTPase activity

metal ion binding

Endocytosis

Fc gamma R-mediated phagocytosis

218842_at -0.582 6.785 -2.395 2.991e-02 0.261 -3.713 RPAP3 RNA polymerase II associated protein 3 12 -46341982 NM_024604 12q13.11 Hs.437855 6

binding

 
215437_x_at -0.217 3.411 -2.395 2.992e-02 0.261 -3.714 BAZ2A bromodomain adjacent to zinc finger domain, 2A 12 -55275646 BE513659 12q24.3-qter Hs.314263 11

chromatin silencing at rDNA

DNA binding

RNA binding

protein binding

nucleus

chromatin silencing complex

nucleolus

nucleolus organizer region

DNA methylation

chromatin remodeling

regulation of transcription, DNA-dependent

zinc ion binding

histone deacetylation

transcription regulator activity

rDNA heterochromatin

metal ion binding

histone acetyl-lysine binding

 
227283_at -0.351 6.540 -2.395 2.992e-02 0.261 -3.714 EFR3B EFR3 homolog B (S. cerevisiae) 2 25118476 AW138794 2p23.3 Hs.4892 6

binding

 
224938_at -0.236 7.096 -2.395 2.993e-02 0.261 -3.714 NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 17 -24606979 AW007746 17q11.2 Hs.462598 13

RNA binding

protein binding

nucleus

cytoplasm

Golgi apparatus

polysomal ribosome

 
209200_at -0.484 10.422 -2.395 2.994e-02 0.261 -3.714 MEF2C myocyte enhancer factor 2C 5 -88049814, -88049814 AL536517 5q14 Hs.653394 56

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription, DNA-dependent

apoptosis

multicellular organismal development

nervous system development

muscle organ development

negative regulation of specific transcription from RNA polymerase II promoter

nuclear speck

cell differentiation

sequence-specific DNA binding

positive regulation of survival gene product expression

MAPK signaling pathway

208965_s_at 0.442 4.780 2.394 2.995e-02 0.261 -3.715 IFI16 interferon, gamma-inducible protein 16 1 157246305 BG256677 1q22 Hs.380250 42

DNA binding

double-stranded DNA binding

protein binding

nucleus

nucleoplasm

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

cell proliferation

response to virus

transcription repressor activity

myeloid cell differentiation

monocyte differentiation

DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis

 
1554481_a_at 0.184 4.882 2.394 2.995e-02 0.261 -3.715 EPB41 erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked) 1 29086214 BC039079 1p33-p32 Hs.175437 Hs.708933 79

actin binding

structural constituent of cytoskeleton

phosphatidylinositol binding

nucleus

cytoplasm

plasma membrane

cell cortex

blood circulation

spectrin

spectrin-associated cytoskeleton

extrinsic to membrane

spectrin binding

cortical cytoskeleton

cortical actin cytoskeleton organization

positive regulation of protein binding

protein complex

Tight junction

212049_at 0.210 6.240 2.394 2.996e-02 0.261 -3.715 WIPF2 WAS/WASL interacting protein family, member 2 17 35629099 BG230612 17q21.1-q21.2 Hs.421622 Hs.705989 11

actin binding

cytoplasm

cytoskeleton

 
223233_s_at 0.233 4.601 2.394 2.997e-02 0.261 -3.715 CGN cingulin 1 149750485 AF263462 1q21 Hs.591464 17

motor activity

actin binding

protein binding

tight junction

biological_process

myosin complex

cell junction

Tight junction

216127_at 0.202 5.166 2.393 3.000e-02 0.261 -3.716 PDIA2 protein disulfide isomerase family A, member 2 16 273118 Z84717 16p13.3 Hs.66581 30

response to hypoxia

protein disulfide isomerase activity

protein binding

endoplasmic reticulum

endoplasmic reticulum lumen

protein folding

protein retention in ER lumen

isomerase activity

cell redox homeostasis

 
238173_at 0.258 5.570 2.393 3.002e-02 0.261 -3.717 TCEA2 transcription elongation factor A (SII), 2 20 62158882, 62164453 AI393116 20q13.33 Hs.505004 Hs.711562 19

DNA binding

RNA polymerase II transcription factor activity

transcription elongation regulator activity

translation elongation factor activity

protein binding

nucleus

RNA elongation

regulation of transcription from RNA polymerase II promoter

transcription elongation factor complex

zinc ion binding

metal ion binding

 
209454_s_at -0.364 6.300 -2.393 3.002e-02 0.261 -3.717 TEAD3 TEA domain family member 3 6 -35549351 AF142482 6p21.2 Hs.485205 13

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

female pregnancy

 
201887_at -0.296 7.133 -2.393 3.004e-02 0.261 -3.717 IL13RA1 interleukin 13 receptor, alpha 1 X 117745586 NM_001560 Xq24 Hs.496646 25

receptor activity

cytokine receptor activity

protein binding

plasma membrane

interleukin-13 receptor complex

cell surface receptor linked signal transduction

integral to membrane

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

204333_s_at -0.618 5.117 -2.393 3.004e-02 0.261 -3.717 AGA aspartylglucosaminidase 4 -178588917 NM_000027 4q32-q33 Hs.207776 36

N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity

lysosome

protein deglycosylation

hydrolase activity

protein maturation

Other glycan degradation

Lysosome

221480_at -0.462 6.856 -2.393 3.004e-02 0.261 -3.718 HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 4 -83493490 BG180941 4q21.1-q21.2 Hs.480073 64

nucleotide binding

nuclear mRNA splicing, via spliceosome

DNA binding

RNA binding

RNA binding

protein binding

nucleus

chromosome

regulation of transcription, DNA-dependent

RNA processing

RNA catabolic process

biological_process

transcription activator activity

heterogeneous nuclear ribonucleoprotein complex

telomeric DNA binding

 
229078_s_at -0.259 5.583 -2.393 3.005e-02 0.261 -3.718 KIAA1704 KIAA1704 13 44461686 AI073486 13q13-q14 Hs.507922 2    
217620_s_at -0.417 4.009 -2.393 3.006e-02 0.261 -3.718 PIK3CB phosphoinositide-3-kinase, catalytic, beta polypeptide 3 -139856920 AA805318 3q22.3 Hs.239818 58

nucleotide binding

activation of MAPK activity

regulation of cell-matrix adhesion

inositol or phosphatidylinositol kinase activity

ATP binding

cytosol

phosphoinositide 3-kinase complex

cellular calcium ion homeostasis

chemotaxis

homophilic cell adhesion

signal transduction

G-protein coupled receptor protein signaling pathway

1-phosphatidylinositol-3-kinase activity

transferase activity

phosphotransferase activity, alcohol group as acceptor

platelet activation

embryonic cleavage

insulin receptor substrate binding

phosphoinositide phosphorylation

phosphatidylinositol-4,5-bisphosphate 3-kinase activity

phosphoinositide-mediated signaling

Inositol phosphate metabolism

ErbB signaling pathway

Chemokine signaling pathway

Phosphatidylinositol signaling system

mTOR signaling pathway

Apoptosis

VEGF signaling pathway

Focal adhesion

Toll-like receptor signaling pathway

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Insulin signaling pathway

Type II diabetes mellitus

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Chronic myeloid leukemia

Acute myeloid leukemia

Small cell lung cancer

Non-small cell lung cancer

213024_at -0.570 5.486 -2.392 3.009e-02 0.262 -3.719 TMF1 TATA element modulatory factor 1 3 -69151667 BF593908 3p21-p12 Hs.267632 15

Golgi membrane

DNA binding

RNA polymerase II transcription factor activity

transcription cofactor activity

protein binding

nucleus

cytoplasm

Golgi apparatus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

membrane

 
1552293_at 0.233 4.680 2.392 3.010e-02 0.262 -3.719 TMEM196 transmembrane protein 196 7 -19725463 NM_152774 7p21.1 Hs.487670 1

membrane

integral to membrane

 
212834_at -0.339 4.758 -2.391 3.012e-02 0.262 -3.720 DDX52 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 17 -33046525 BE963238 17q21.1 Hs.590937 8

nucleotide binding

RNA binding

helicase activity

ATP binding

nucleus

nucleolus

ATP-dependent helicase activity

hydrolase activity

 
218723_s_at 0.566 8.129 2.391 3.013e-02 0.262 -3.720 C13orf15 chromosome 13 open reading frame 15 13 40929541 NM_014059 13q14.11 Hs.507866 16

regulation of cyclin-dependent protein kinase activity

protein binding

nucleus

cytoplasm

centrosome

cell cycle

 
208885_at 0.389 5.733 2.391 3.013e-02 0.262 -3.720 LCP1 lymphocyte cytosolic protein 1 (L-plastin) 13 -45598059 J02923 13q14.3 Hs.381099 Hs.710563 36

ruffle

phagocytic cup

calcium ion binding

cytoplasm

cytosol

actin filament

biological_process

identical protein binding

actin filament binding

actin filament bundle formation

 
209105_at -0.397 5.994 -2.391 3.013e-02 0.262 -3.720 NCOA1 nuclear receptor coactivator 1 2 24660849 AI672428 2p23 Hs.596314 123

DNA binding

chromatin binding

transcription coactivator activity

histone acetyltransferase activity

signal transducer activity

nucleus

signal transduction

acyltransferase activity

transferase activity

androgen receptor signaling pathway

transcription regulator activity

nuclear hormone receptor binding

positive regulation of transcription from RNA polymerase II promoter

protein N-terminus binding

androgen receptor binding

 
222705_s_at 0.297 3.865 2.391 3.015e-02 0.262 -3.721 SLC25A15 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15 13 40261546 BC002702 13q14 Hs.646645 Hs.655240 17

urea cycle

L-ornithine transmembrane transporter activity

mitochondrial ornithine transport

transporter activity

binding

mitochondrion

mitochondrial inner membrane

cellular amino acid metabolic process

transport

membrane

integral to membrane

 
1570410_at 0.213 6.111 2.391 3.016e-02 0.262 -3.721 CYGB cytoglobin 17 -72035034 BC018822 17q25.3 Hs.95120 28

peroxidase activity

oxygen transporter activity

cytoplasm

transport

response to oxidative stress

oxygen transport

oxygen binding

heme binding

neuron projection

cell soma

metal ion binding

 
239891_x_at -0.500 8.671 -2.391 3.017e-02 0.262 -3.721 RAB12 RAB12, member RAS oncogene family 18 8599442 AA001052 18p11.22 Hs.270074 2

nucleotide binding

GTP binding

Golgi apparatus

small GTPase mediated signal transduction

protein transport

membrane

 
243313_at -0.370 10.623 -2.390 3.018e-02 0.262 -3.722 SYNPO2L synaptopodin 2-like 10 -75074649, -75074649 AI141151 10q22.2 Hs.645273 4

actin binding

protein binding

cytoplasm

cytoskeleton

 
1553533_at -0.446 5.388 -2.390 3.018e-02 0.262 -3.722 JPH1 junctophilin 1 8 -75309492 NM_020647 8q21 Hs.657367 9

molecular_function

microsome

plasma membrane

muscle organ development

structural constituent of muscle

junctional sarcoplasmic reticulum membrane

integral to membrane

sarcoplasmic reticulum

Z disc

junctional membrane complex

regulation of ryanodine-sensitive calcium-release channel activity

calcium ion transport into cytosol

 
242916_at 0.299 4.115 2.390 3.019e-02 0.262 -3.722 CEP110 centrosomal protein 110kDa 9 122890394 AA642477 9q33-q34 Hs.653263 12

protein binding

centrosome

cell cycle

cell division

 
228023_x_at -0.256 7.370 -2.390 3.019e-02 0.262 -3.722 AMY2B amylase, alpha 2B (pancreatic) 1 103898844 AV699389 1p21 Hs.484588 19

alpha-amylase activity

calcium ion binding

extracellular region

carbohydrate metabolic process

digestion

metabolic process

hydrolase activity, acting on glycosyl bonds

chloride ion binding

Starch and sucrose metabolism

Metabolic pathways

209772_s_at 0.231 3.933 2.390 3.020e-02 0.262 -3.722 CD24 CD24 molecule 6 -19611913 X69397 6q21 Hs.644105 Hs.694721 65

response to hypoxia

cell activation

regulation of cytokine-mediated signaling pathway

response to molecule of bacterial origin

pre-B cell differentiation

leukocyte migration during inflammatory response

immune response-regulating cell surface receptor signaling pathway

positive regulation of T cell mediated immune response to tumor cell

positive regulation of inflammatory response to antigenic stimulus

positive regulation of B cell apoptosis

signal transducer activity

protein binding

membrane fraction

plasma membrane

oxygen and reactive oxygen species metabolic process

heterophilic cell adhesion

leukocyte adhesion

elevation of cytosolic calcium ion concentration

neuromuscular synaptic transmission

negative regulation of neuroblast proliferation

induction of apoptosis by extracellular signals

induction of apoptosis by intracellular signals

apoptotic mitochondrial changes

external side of plasma membrane

Wnt receptor signaling pathway

cell migration

protein kinase binding

carbohydrate binding

apoptotic nuclear changes

protein tyrosine kinase activator activity

regulation of epithelial cell differentiation

negative regulation of B cell proliferation

neuron projection development

anchored to membrane

T cell costimulation

anchored to external side of plasma membrane

microvillus membrane

B cell receptor transport into membrane raft

chemokine receptor transport out of membrane raft

negative regulation of transforming growth factor-beta3 production

positive regulation of integrin activation

positive regulation of cell-cell adhesion mediated by integrin

negative regulation of erythrocyte clearance

homotypic cell-cell adhesion

negative regulation of erythrocyte aggregation

positive regulation of T cell homeostatic proliferation

positive regulation of activated T cell proliferation

regulation of phosphorylation

cholesterol homeostasis

positive regulation of MAP kinase activity

regulation of MAPKKK cascade

eukaryotic cell surface binding

response to estrogen stimulus

membrane raft

regulation of B cell differentiation

negative regulation of neuron differentiation

respiratory burst

negative regulation of T cell homeostatic proliferation

positive regulation of alpha-beta T cell proliferation

synaptic vesicle endocytosis

positive regulation of peptidyl-tyrosine phosphorylation

positive regulation of calcium-mediated signaling

cilium membrane

 
233297_s_at 0.196 2.332 2.390 3.023e-02 0.262 -3.723 C13orf38 chromosome 13 open reading frame 38 13 -35703215, -35699181 AL139377 13q13.3 Hs.124519 Hs.656745 3    
224125_at 0.208 7.203 2.390 3.023e-02 0.262 -3.723 PLEKHN1 pleckstrin homology domain containing, family N member 1 1 891739 AL136730 1p36.33 Hs.528691 5    
208091_s_at -0.290 8.084 -2.390 3.024e-02 0.262 -3.723 VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 7 -55505799 NM_030796 7p11.2 Hs.488307 17    
206734_at -0.337 5.692 -2.389 3.026e-02 0.262 -3.724 JRKL jerky homolog-like (mouse) 11 95762805 NM_003772 11q21 Hs.105940 4

DNA binding

nucleus

central nervous system development

regulation of transcription

 
202450_s_at 0.481 6.353 2.389 3.027e-02 0.262 -3.724 CTSK cathepsin K 1 -149035310 NM_000396 1q21 Hs.632466 80

cysteine-type endopeptidase activity

protein binding

lysosome

proteolysis

peptidase activity

Lysosome

1563497_at -0.380 6.104 -2.389 3.028e-02 0.262 -3.725 USP25 ubiquitin specific peptidase 25 21 16024366 AL833500 21q11.2 Hs.473370 11

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

protein modification process

proteolysis

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
234281_at 0.204 3.060 2.389 3.028e-02 0.262 -3.725 ESPNP espin pseudogene 1 -16890299 AL137798 1p36.13 Hs.548239 1    
204497_at -0.374 8.496 -2.389 3.028e-02 0.262 -3.725 ADCY9 adenylate cyclase 9 16 -3952652 AB011092 16p13.3 Hs.391860 Hs.610484 19

nucleotide binding

magnesium ion binding

adenylate cyclase activity

ATP binding

integral to plasma membrane

cAMP biosynthetic process

intracellular signaling cascade

membrane

Purine metabolism

Calcium signaling pathway

Chemokine signaling pathway

Vascular smooth muscle contraction

Gap junction

GnRH signaling pathway

Melanogenesis

Vibrio cholerae infection

228057_at -0.641 9.650 -2.389 3.029e-02 0.262 -3.725 DDIT4L DNA-damage-inducible transcript 4-like 4 -101326049 AA528140 4q24 Hs.480378 6

cytoplasm

negative regulation of signal transduction

 
210612_s_at 1.025 5.350 2.389 3.029e-02 0.262 -3.725 SYNJ2 synaptojanin 2 6 158322906 AF318616 6q25.3 Hs.434494 18

RNA binding

inositol or phosphatidylinositol phosphatase activity

phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity

protein binding

membrane

dephosphorylation

hydrolase activity

Inositol phosphate metabolism

Metabolic pathways

Phosphatidylinositol signaling system

230065_at 0.244 4.487 2.388 3.033e-02 0.262 -3.726 ZNF180 zinc finger protein 180 19 -49671698 AA814415 19q13.2 Hs.22305 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
240465_at 0.358 4.734 2.388 3.036e-02 0.262 -3.727 C4orf32 chromosome 4 open reading frame 32 4 113286001 BF508074 4q25 Hs.23439 4

membrane

integral to membrane

 
212030_at -0.571 6.806 -2.387 3.036e-02 0.262 -3.727 RBM25 RNA binding motif protein 25 14 72594973 BG251218 14q24.3 Hs.531106 13

nucleotide binding

nuclear mRNA splicing, via spliceosome

nucleic acid binding

mRNA binding

cellular_component

nucleus

cytoplasm

nuclear speck

 
218527_at -0.192 6.301 -2.387 3.038e-02 0.262 -3.727 APTX aprataxin 9 -32962607, -32962607, -32962607, -32962607, -32962607 NM_017692 9p13.3 Hs.20158 41

single strand break repair

chromatin

chromatin binding

damaged DNA binding

double-stranded DNA binding

double-stranded RNA binding

intracellular

nucleus

nucleoplasm

nucleolus

response to DNA damage stimulus

cell death

zinc ion binding

phosphoglycolate phosphatase activity

hydrolase activity

regulation of protein stability

DNA 5'-adenosine monophosphate hydrolase activity

response to hydrogen peroxide

metal ion binding

protein N-terminus binding

 
213880_at -1.943 6.564 -2.387 3.038e-02 0.262 -3.728 LGR5 leucine-rich repeat-containing G protein-coupled receptor 5 12 70120079 AL524520 12q22-q23 Hs.658889 16

receptor activity

protein binding

plasma membrane

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

protein-hormone receptor activity

 
1553910_at 0.207 3.279 2.387 3.039e-02 0.262 -3.728 NBPF4 neuroblastoma breakpoint family, member 4 1 -108567485 NM_152488 1p13.3 Hs.511849 Hs.712226 3    
218992_at 0.186 8.500 2.387 3.040e-02 0.263 -3.728 C9orf46 chromosome 9 open reading frame 46 9 -5347970 NM_018465 9p24.1 Hs.584242 7

membrane

integral to membrane

 
211762_s_at -0.603 6.424 -2.387 3.040e-02 0.263 -3.728 KPNA2 karyopherin alpha 2 (RAG cohort 1, importin alpha 1) 17 63462309, -1713110 BC005978 17q24.2 Hs.594238 125

regulation of DNA recombination

M phase specific microtubule process

G2 phase of mitotic cell cycle

protein binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

DNA metabolic process

NLS-bearing substrate import into nucleus

intracellular protein transport

nuclear localization sequence binding

protein transporter activity

interspecies interaction between organisms

 
213859_x_at -0.282 3.540 -2.387 3.040e-02 0.263 -3.728 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 4 144654065 AI652586 4q31.1-q31.2 Hs.558422 Hs.710623 37

nucleotide binding

condensed chromosome

DNA binding

RNA polymerase II transcription factor activity

helicase activity

ATP binding

nucleus

nucleoplasm

nucleolus

chromatin assembly or disassembly

nucleosome assembly

transcription initiation

regulation of transcription from RNA polymerase II promoter

embryonic development

transcription activator activity

nucleosome positioning

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

ATPase activity

RSF complex

nucleosome binding

histone binding

ATP-dependent chromatin remodeling

 
228833_s_at 0.219 3.670 2.387 3.041e-02 0.263 -3.728 LOC400027 hypothetical protein LOC400027 12   BE963456 12q12 Hs.597122 1    
232740_at 0.208 2.920 2.386 3.043e-02 0.263 -3.729 MCM3APAS MCM3AP antisense RNA (non-protein coding) 21 46473585 BC002458 21q22.3 Hs.709346 3    
242821_at -0.213 3.756 -2.386 3.043e-02 0.263 -3.729 C9orf93 chromosome 9 open reading frame 93 9 15543096 N94866 9p22.3 Hs.17267 4    
213851_at -0.574 7.019 -2.386 3.044e-02 0.263 -3.729 TMEM110 transmembrane protein 110 3 -52848937 BG031677 3p21.1 Hs.705605 2

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
228937_at 0.703 3.778 2.386 3.044e-02 0.263 -3.729 C13orf31 chromosome 13 open reading frame 31 13 43351419, 43351968 AI659800 13q14.11 Hs.210586 5    
214093_s_at -0.372 6.861 -2.386 3.045e-02 0.263 -3.729 FUBP1 far upstream element (FUSE) binding protein 1 1 -78186178 AA156865 1p31.1 Hs.567380 28

single-stranded DNA binding

transcription factor activity

RNA binding

protein binding

nucleus

nucleolus

transcription from RNA polymerase II promoter

regulation of transcription

 
213498_at 0.234 4.665 2.386 3.046e-02 0.263 -3.730 CREB3L1 cAMP responsive element binding protein 3-like 1 11 46255803 BG328407 11p11.2 Hs.405961 7

transcription factor activity

nucleus

endoplasmic reticulum

regulation of transcription, DNA-dependent

response to unfolded protein

membrane

integral to membrane

sequence-specific DNA binding

protein dimerization activity

Melanogenesis

Huntington's disease

Prostate cancer

225298_at 0.218 8.742 2.386 3.047e-02 0.263 -3.730 PNKD paroxysmal nonkinesigenic dyskinesia 2 218843358, 218843358, 218896161 AA074597 2q35 Hs.98475 21

nucleus

cytoplasm

mitochondrion

zinc ion binding

membrane

hydrolase activity

metal ion binding

 
231242_at 0.309 4.022 2.386 3.047e-02 0.263 -3.730 BHLHE41 basic helix-loop-helix family, member e41 12 -26164227 R93946 12p11.23-p12.1 Hs.177841 15

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

cell proliferation

organ morphogenesis

cell differentiation

Circadian rhythm - mammal

224680_at -0.220 7.704 -2.385 3.048e-02 0.263 -3.731 TMED4 transmembrane emp24 protein transport domain containing 4 7 -44585286 AL539253 7p13 Hs.598832 Hs.715273 11

endoplasmic reticulum

transport

membrane

integral to membrane

 
204964_s_at 0.567 8.973 2.385 3.049e-02 0.263 -3.731 SSPN sarcospan (Kras oncogene-associated gene) 12 26239535, 26239772 NM_005086 12p11.2 Hs.183428 26

integral to plasma membrane

muscle contraction

cell adhesion

dystrophin-associated glycoprotein complex

cell junction

transport vesicle

sarcolemma

synapse

postsynaptic membrane

 
233432_at 0.251 4.366 2.385 3.051e-02 0.263 -3.731 LOC646982 twelve-thirteen translocation leukemia gene 13 -39923071, -39819272 AK025090 13q14.11 Hs.287664 1    
220864_s_at 0.245 11.127 2.385 3.051e-02 0.263 -3.731 NDUFA13 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13 19 19487539 NM_015965 19p13.2 Hs.534453 25

NADH dehydrogenase activity

protein binding

ATP binding

nucleus

nucleoplasm

cytoplasm

mitochondrion

mitochondrial respiratory chain complex I

protein import into nucleus

oxygen and reactive oxygen species metabolic process

transport

NADH dehydrogenase (ubiquinone) activity

induction of apoptosis by extracellular signals

membrane

integral to membrane

negative regulation of translation

electron transport chain

apoptotic nuclear changes

negative regulation of cell growth

negative regulation of cell growth

negative regulation of transcription, DNA-dependent

 
225949_at 0.352 6.391 2.385 3.052e-02 0.263 -3.732 NRBP2 nuclear receptor binding protein 2 8 -144987903 N21030 8q24.3 Hs.521926 5

nucleotide binding

protein kinase activity

protein amino acid phosphorylation

 
209020_at -0.303 7.971 -2.385 3.053e-02 0.263 -3.732 C20orf111 chromosome 20 open reading frame 111 20 -42258549 AF217514 20q13.11 Hs.75798 6    
214648_at 0.235 3.631 2.385 3.053e-02 0.263 -3.732 GPX5 glutathione peroxidase 5 (epididymal androgen-related protein) 6 28601767 AI207120 6p22.1 Hs.248129 14

glutathione peroxidase activity

extracellular region

lipid metabolic process

response to oxidative stress

oxidoreductase activity

oxidation reduction

Glutathione metabolism

Arachidonic acid metabolism

219562_at 0.339 5.205 2.385 3.053e-02 0.263 -3.732 RAB26 RAB26, member RAS oncogene family 16 2138651 NM_014353 16p13.3 Hs.3797 8

nucleotide binding

protein binding

GTP binding

GTP binding

cellular_component

plasma membrane

small GTPase mediated signal transduction

biological_process

protein transport

regulation of exocytosis

intrinsic to plasma membrane

exocrine system development

 
1556820_a_at -0.393 5.343 -2.385 3.053e-02 0.263 -3.732 DLEU2 deleted in lymphocytic leukemia 2 (non-protein coding) 13 -49454688 H48516 13q14.3 Hs.547964 10    
209299_x_at -0.217 6.478 -2.384 3.054e-02 0.263 -3.732 PPIL2 peptidylprolyl isomerase (cyclophilin)-like 2 22 20350272 BC000022 22q11.21 Hs.438587 Hs.517436 10

ubiquitin ligase complex

protein polyubiquitination

molecular_function

peptidyl-prolyl cis-trans isomerase activity

ubiquitin-protein ligase activity

nucleus

Golgi lumen

protein folding

biological_process

isomerase activity

Ubiquitin mediated proteolysis

222343_at 0.255 4.126 2.384 3.057e-02 0.263 -3.733 BCL2L11 BCL2-like 11 (apoptosis facilitator) 2 111594961, 111594961 AA629050 2q13 Hs.469658 143

peripheral to membrane of membrane fraction

in utero embryonic development

B cell homeostasis

B cell apoptosis

kidney development

myeloid cell homeostasis

protein binding

cytoplasm

mitochondrion

mitochondrial outer membrane

cytosol

plasma membrane

induction of apoptosis

cell-matrix adhesion

spermatogenesis

microtubule binding

male gonad development

activation of pro-apoptotic gene products

post-embryonic development

mammary gland development

tube lumen formation

odontogenesis of dentine-containing tooth

T cell homeostasis

ear development

regulation of organ growth

regulation of pigmentation during development

spleen development

thymus development

post-embryonic organ morphogenesis

 
240391_at -0.584 5.230 -2.384 3.058e-02 0.263 -3.733 NDUFB2 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa 7 140042949 AA699958 7q34 Hs.655788 8

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial electron transport, NADH to ubiquinone

transport

NADH dehydrogenase (ubiquinone) activity

membrane

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

221022_s_at 0.180 5.485 2.383 3.060e-02 0.263 -3.734 PMFBP1 polyamine modulated factor 1 binding protein 1 16 -70710497, -70710497 NM_031293 16q22.2 Hs.714939 10

cytoplasm

 
226310_at -0.406 5.876 -2.383 3.061e-02 0.263 -3.734 RICTOR RPTOR independent companion of MTOR, complex 2 5 -38973779 AI743511 5p13.1 Hs.407926 21

guanyl-nucleotide exchange factor activity

protein binding

intracellular

embryonic development

positive regulation of actin filament polymerization

actin cytoskeleton reorganization

TORC2 complex

positive regulation of TOR signaling pathway

regulation of Rac GTPase activity

regulation of actin cytoskeleton organization

positive regulation of peptidyl-tyrosine phosphorylation

regulation of small GTPase mediated signal transduction

regulation of protein kinase B signaling cascade

mTOR signaling pathway

217870_s_at -0.319 9.052 -2.383 3.062e-02 0.263 -3.734 CMPK1 cytidine monophosphate (UMP-CMP) kinase 1, cytosolic 1 47572055 NM_016308 1p32 Hs.714325 16

nucleotide binding

cytidylate kinase activity

uridine kinase activity

ATP binding

nucleus

cytoplasm

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

pyrimidine ribonucleotide biosynthetic process

transferase activity

phosphotransferase activity, phosphate group as acceptor

Pyrimidine metabolism

Metabolic pathways

216466_at -0.180 2.176 -2.383 3.063e-02 0.263 -3.735 NAV3 neuron navigator 3 12 76749199 AL080104 12q14.3 Hs.655301 9

nucleotide binding

nucleus

nuclear outer membrane

membrane

nucleoside-triphosphatase activity

 
229186_s_at 0.259 4.545 2.382 3.066e-02 0.263 -3.736 ZFP64 zinc finger protein 64 homolog (mouse) 20 -50201223, -50133956 BF196346 20q13.2 Hs.473082 10

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
203611_at -0.321 6.418 -2.382 3.066e-02 0.263 -3.736 TERF2 telomeric repeat binding factor 2 16 -67947033 NM_005652 16q22.1 Hs.63335 79

nuclear telomere cap complex

age-dependent telomere shortening

male germ cell nucleus

in utero embryonic development

DNA binding

double-stranded telomeric DNA binding

nucleus

nucleoplasm

chromosome

cytoplasm

Golgi apparatus

telomere maintenance via telomerase

cell cycle

protein C-terminus binding

senescence

Mre11 complex

telomeric loop formation

protection from non-homologous end joining at telomere

positive regulation of telomere maintenance

negative regulation of telomere maintenance via semi-conservative replication

protein homodimerization activity

regulation of transcription

protein localization to telomere

 
227998_at 0.340 7.830 2.382 3.069e-02 0.263 -3.736 S100A16 S100 calcium binding protein A16 1 -151845990 AA045184 1q21 Hs.515714 8

calcium ion binding

nucleus

cytoplasm

protein homodimerization activity

response to calcium ion

 
211952_at -0.321 6.210 -2.382 3.070e-02 0.264 -3.737 IPO5 importin 5 13 97403929 AF339834 13q32.2 Hs.712598 53

protein import into nucleus, docking

GTPase inhibitor activity

protein binding

nucleus

nuclear pore

nucleolus

cytoplasm

NLS-bearing substrate import into nucleus

intracellular protein transport

Ran GTPase binding

protein transporter activity

interspecies interaction between organisms

 
1552799_at -0.240 3.813 -2.381 3.073e-02 0.264 -3.738 TSNARE1 t-SNARE domain containing 1 8 -143291348 NM_145003 8q24.3 Hs.370931 3

protein binding

membrane

integral to membrane

vesicle-mediated transport

SNARE interactions in vesicular transport

1555626_a_at 0.225 5.154 2.381 3.074e-02 0.264 -3.738 SLAMF1 signaling lymphocytic activation molecule family member 1 1 -158846514 BC012602 1q22-q23 Hs.523660 36

antigen binding

transmembrane receptor activity

plasma membrane

positive regulation of cell proliferation

cell surface

integral to membrane

interspecies interaction between organisms

lymphocyte activation

 
208630_at 0.304 9.543 2.381 3.075e-02 0.264 -3.738 HADHA hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), alpha subunit 2 -26267007 AI972144 2p23 Hs.516032 36

acyl-CoA binding

3-hydroxyacyl-CoA dehydrogenase activity

acetyl-CoA C-acetyltransferase activity

acetyl-CoA C-acyltransferase activity

enoyl-CoA hydratase activity

binding

mitochondrion

mitochondrial inner membrane

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

oxidoreductase activity

fatty acid beta-oxidation multienzyme complex

long-chain-enoyl-CoA hydratase activity

long-chain-3-hydroxyacyl-CoA dehydrogenase activity

lyase activity

response to drug

mitochondrial nucleoid

NAD or NADH binding

oxidation reduction

Fatty acid elongation in mitochondria

Fatty acid metabolism

Valine, leucine and isoleucine degradation

Lysine degradation

Tryptophan metabolism

beta-Alanine metabolism

Benzoate degradation via CoA ligation

Propanoate metabolism

Butanoate metabolism

Limonene and pinene degradation

Caprolactam degradation

Biosynthesis of unsaturated fatty acids

Metabolic pathways

220646_s_at 0.442 3.337 2.381 3.076e-02 0.264 -3.738 KLRF1 killer cell lectin-like receptor subfamily F, member 1 12 9871343 NM_016523 12p13.2-p12.3 Hs.183125 6

binding

sugar binding

integral to plasma membrane

cell surface receptor linked signal transduction

membrane

MHC class I receptor activity

 
1564490_at 0.207 4.663 2.381 3.076e-02 0.264 -3.738 LOC100128830 hypothetical protein LOC100128830 10   AK097584 10q26.3 Hs.638406 1    
212526_at -0.313 7.006 -2.381 3.076e-02 0.264 -3.739 SPG20 spastic paraplegia 20 (Troyer syndrome) 13 -35773776, -35773776, -35773776 AK002207 13q13.3 Hs.440414 19

cell death

 
210622_x_at -0.216 5.865 -2.380 3.079e-02 0.264 -3.739 CDK10 cyclin-dependent kinase 10 16 88280576 AF153430 16q24 Hs.699177 16

nucleotide binding

cyclin-dependent protein kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

traversing start control point of mitotic cell cycle

negative regulation of cell proliferation

transferase activity

 
204706_at 0.228 6.578 2.380 3.080e-02 0.264 -3.740 INPP5E inositol polyphosphate-5-phosphatase, 72 kDa 9 -138442892 NM_019892 9q34.3 Hs.120998 5

Golgi membrane

inositol or phosphatidylinositol phosphatase activity

phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity

inositol-polyphosphate 5-phosphatase activity

cellular_component

Golgi apparatus

lipid metabolic process

biological_process

membrane

hydrolase activity

Inositol phosphate metabolism

Metabolic pathways

Phosphatidylinositol signaling system

223141_at -0.260 7.543 -2.380 3.081e-02 0.264 -3.740 UCK1 uridine-cytidine kinase 1 9 -133389004 AK022317 9q34.13 Hs.9597 8

nucleotide binding

uridine kinase activity

ATP binding

cytosol

metabolic process

kinase activity

transferase activity

phosphotransferase activity, alcohol group as acceptor

Pyrimidine metabolism

Drug metabolism - other enzymes

Metabolic pathways

212673_at -0.222 7.686 -2.380 3.081e-02 0.264 -3.740 METAP1 methionyl aminopeptidase 1 4 100135810 D42084 4q23 Hs.480364 13

aminopeptidase activity

protein binding

cytoplasm

regulation of translation

proteolysis

peptidase activity

metalloexopeptidase activity

cellular process

peptidyl-methionine modification

N-terminal protein amino acid modification

metal ion binding

cobalt ion binding

 
201017_at -0.591 8.116 -2.379 3.084e-02 0.264 -3.741 EIF1AX eukaryotic translation initiation factor 1A, X-linked X -20052556 BG149698 Xp22.12 Hs.522590 17

RNA binding

translation initiation factor activity

cytoplasm

cytosol

translational initiation

 
208394_x_at 0.264 3.497 2.379 3.085e-02 0.264 -3.741 ESM1 endothelial cell-specific molecule 1 5 -54309452 NM_007036 5q11.2 Hs.129944 15

regulation of cell growth

protein binding

insulin-like growth factor binding

extracellular region

growth factor activity

biological_process

 
202650_s_at -0.241 6.457 -2.379 3.086e-02 0.264 -3.741 KIAA0195 KIAA0195 17 70964258 NM_014738 17q25.1 Hs.514474 8

membrane

integral to membrane

 
203710_at 0.528 4.914 2.379 3.087e-02 0.264 -3.742 ITPR1 inositol 1,4,5-triphosphate receptor, type 1 3 4510033 NM_002222 3p26-p25 Hs.567295 Hs.715765 87

response to hypoxia

ion channel activity

inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity

calcium channel activity

calcium channel activity

calcium ion binding

protein binding

endoplasmic reticulum

ion transport

calcium ion transport

signal transduction

cell death

calcium ion transmembrane transporter activity

membrane

integral to membrane

platelet dense granule membrane

platelet dense tubular network membrane

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Gap junction

Long-term potentiation

Long-term depression

GnRH signaling pathway

Alzheimer's disease

Huntington's disease

214057_at -0.409 4.910 -2.379 3.088e-02 0.264 -3.742 MCL1 myeloid cell leukemia sequence 1 (BCL2-related) 1 -148813658 H71805 1q21 Hs.719112 154

cell fate determination

protein binding

nucleus

nucleoplasm

cytoplasm

mitochondrion

mitochondrial outer membrane

anti-apoptosis

multicellular organismal development

protein channel activity

membrane

integral to membrane

cellular homeostasis

cell differentiation

response to cytokine stimulus

regulation of apoptosis

protein heterodimerization activity

 
218396_at -0.273 8.899 -2.379 3.088e-02 0.264 -3.742 VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) 15 -59947234, -59931883, -59931881 NM_017684 15q22.2 Hs.511668 6

protein localization

 
213245_at 0.404 5.967 2.379 3.088e-02 0.264 -3.742 ADCY1 adenylate cyclase 1 (brain) 7 45580649 AL120173 7p13-p12 Hs.192215 24

nucleotide binding

magnesium ion binding

calmodulin binding

ATP binding

cAMP biosynthetic process

long-term memory

calcium- and calmodulin-responsive adenylate cyclase activity

hormone-mediated signaling

membrane

integral to membrane

Purine metabolism

Calcium signaling pathway

Chemokine signaling pathway

Vascular smooth muscle contraction

Gap junction

Long-term potentiation

GnRH signaling pathway

Melanogenesis

209146_at 0.364 5.459 2.379 3.089e-02 0.264 -3.742 SC4MOL sterol-C4-methyl oxidase-like 4 166468267 AV704962 4q32-q34 Hs.105269 Hs.593050 5

C-4 methylsterol oxidase activity

C-4 methylsterol oxidase activity

iron ion binding

endoplasmic reticulum

endoplasmic reticulum membrane

plasma membrane

fatty acid biosynthetic process

integral to membrane

sterol biosynthetic process

oxidoreductase activity

oxidation reduction

Steroid biosynthesis

Biosynthesis of alkaloids derived from terpenoid and polyketide

Metabolic pathways

210029_at 0.430 6.979 2.379 3.090e-02 0.264 -3.742 IDO1 indoleamine 2,3-dioxygenase 1 8 39890484 M34455 8p12-p11 Hs.840 105

positive regulation of T cell tolerance induction

positive regulation of chronic inflammatory response

positive regulation of T-helper 2 type immune response

tryptophan 2,3-dioxygenase activity

tryptophan 2,3-dioxygenase activity

cytoplasm

cytosol

female pregnancy

electron carrier activity

oxidoreductase activity

tryptophan catabolic process to kynurenine

NAD metabolic process

heme binding

indoleamine 2,3-dioxygenase activity

metal ion binding

oxidation reduction

Tryptophan metabolism

Metabolic pathways

229849_at -0.472 8.410 -2.378 3.090e-02 0.264 -3.743 WIPF3 WAS/WASL interacting protein family, member 3 7 29840865 AI807950 7p14.3 Hs.709280 5

actin binding

cytoplasm

multicellular organismal development

spermatogenesis

cell differentiation

 
209747_at 0.591 6.371 2.378 3.091e-02 0.264 -3.743 TGFB3 transforming growth factor, beta 3 14 -75494194 J03241 14q24 Hs.592317 94

activation of MAPK activity

in utero embryonic development

type II transforming growth factor beta receptor binding

type II transforming growth factor beta receptor binding

extracellular region

extracellular region

extracellular space

nucleus

cytoplasm

plasma membrane

induction of apoptosis

salivary gland morphogenesis

growth factor activity

negative regulation of DNA replication

negative regulation of cell proliferation

embryonic development

positive regulation of epithelial to mesenchymal transition

positive regulation of epithelial to mesenchymal transition

positive regulation of pathway-restricted SMAD protein phosphorylation

cell growth

menstrual cycle phase

secretory granule

T-tubule

positive regulation of bone mineralization

negative regulation of transforming growth factor beta receptor signaling pathway

mammary gland development

extracellular matrix

platelet alpha granule lumen

response to progesterone stimulus

positive regulation of collagen biosynthetic process

type I transforming growth factor beta receptor binding

odontogenesis

identical protein binding

cell soma

positive regulation of gene-specific transcription

positive regulation of gene-specific transcription

negative regulation of neuron apoptosis

response to estrogen stimulus

ossification involved in bone remodeling

cell-cell junction organization

positive regulation of DNA replication

positive regulation of transcription from RNA polymerase II promoter

lung alveolus development

embryonic neurocranium morphogenesis

transforming growth factor beta binding

positive regulation of protein secretion

positive regulation of filopodium assembly

palate development

positive regulation of SMAD protein nuclear translocation

detection of hypoxia

MAPK signaling pathway

Cytokine-cytokine receptor interaction

Cell cycle

TGF-beta signaling pathway

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Chronic myeloid leukemia

Hypertrophic cardiomyopathy (HCM)

236523_at -0.497 10.116 -2.378 3.091e-02 0.264 -3.743 LOC285556 hypothetical protein LOC285556 4   BF435831 4q23 Hs.480371      
1561923_a_at -0.216 3.630 -2.378 3.091e-02 0.264 -3.743 SF3B14 splicing factor 3B, 14 kDa subunit 2 -24143957 AF147425 2pter-p25.1 Hs.177861 14

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

RNA splicing

 
202825_at 0.219 12.751 2.378 3.092e-02 0.264 -3.743 SLC25A4 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 4 186301391 NM_001151 4q35 Hs.246506 57

mitochondrial genome maintenance

transporter activity

ATP:ADP antiporter activity

protein binding

mitochondrion

mitochondrial inner membrane

mitochondrial inner membrane

integral to plasma membrane

generation of precursor metabolites and energy

transport

adenine transmembrane transporter activity

ADP transport

ATP transport

membrane

interspecies interaction between organisms

glutamate uptake during transmission of nerve impulse

Calcium signaling pathway

Parkinson's disease

Huntington's disease

229240_at -0.311 5.382 -2.378 3.093e-02 0.264 -3.744 ZDHHC21 zinc finger, DHHC-type containing 21 9 -14607032 AI658548 9p22.3 Hs.649522 4

zinc ion binding

acyltransferase activity

membrane

integral to membrane

transferase activity

metal ion binding

 
205479_s_at 0.251 6.108 2.378 3.093e-02 0.264 -3.744 PLAU plasminogen activator, urokinase 10 75340867 NM_002658 10q24 Hs.77274 313

serine-type endopeptidase activity

extracellular region

plasma membrane

proteolysis

chemotaxis

signal transduction

blood coagulation

peptidase activity

fibrinolysis

Complement and coagulation cascades

235119_at -0.484 6.176 -2.378 3.096e-02 0.265 -3.744 TAF3 TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa 10 7900678 AI123516 10p15.1 Hs.527688 Hs.709995 12

DNA binding

protein binding

nucleus

transcription factor TFIID complex

zinc ion binding

regulation of transcription

metal ion binding

maintenance of protein location in nucleus

 
1553277_at -0.229 2.343 -2.377 3.097e-02 0.265 -3.745 RTTN rotatin 18 -65822020 NM_173630 18q22.2 Hs.654809 3

binding

multicellular organismal development

determination of left/right symmetry

 
209510_at -0.300 8.058 -2.377 3.099e-02 0.265 -3.745 RNF139 ring finger protein 139 8 125556188 AF064801 8q24 Hs.492751 10

receptor activity

protein binding

endoplasmic reticulum

zinc ion binding

membrane

integral to membrane

ligase activity

modification-dependent protein catabolic process

regulation of protein ubiquitination

metal ion binding

 
208589_at -0.363 3.433 -2.377 3.099e-02 0.265 -3.745 TRPC7 transient receptor potential cation channel, subfamily C, member 7 5 -135577021 NM_020389 5q31.1 Hs.591263 13

ion channel activity

calcium channel activity

calcium ion binding

protein binding

ion transport

calcium ion transport

manganese ion transport

membrane

integral to membrane

 
227329_at 0.278 5.735 2.376 3.104e-02 0.265 -3.747 ZBTB46 zinc finger and BTB domain containing 46 20 -61846321 AU156821 20q13.33 Hs.585028 5

nucleic acid binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
203947_at -0.293 6.961 -2.376 3.104e-02 0.265 -3.747 CSTF3 cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa 11 -33119552, -33062705 NM_001326 11p13 Hs.44402 15

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

intracellular

nucleus

mRNA polyadenylation

mRNA cleavage

 
220682_s_at -0.335 4.161 -2.376 3.106e-02 0.265 -3.747 KLHL5 kelch-like 5 (Drosophila) 4 38723053, 38740454 NM_015990 4p14 Hs.272251 6

actin binding

protein binding

cytoplasm

cytoskeleton

 
205642_at 0.274 5.045 2.376 3.106e-02 0.265 -3.747 CEP110 centrosomal protein 110kDa 9 122890394 NM_007018 9q33-q34 Hs.653263 12

protein binding

centrosome

cell cycle

cell division

 
219246_s_at 0.234 5.724 2.376 3.107e-02 0.265 -3.747 OGFOD2 2-oxoglutarate and iron-dependent oxygenase domain containing 2 12 122025306 NM_024623 12q24.31 Hs.524817 3

iron ion binding

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

L-ascorbic acid binding

metal ion binding

oxidation reduction

 
45297_at 0.275 6.332 2.376 3.107e-02 0.265 -3.748 EHD2 EH-domain containing 2 19 52908412 AI417917 19q13.3 Hs.719225 10

nucleotide binding

nucleic acid binding

GTPase activity

calcium ion binding

ATP binding

GTP binding

membrane fraction

nucleus

endosome

plasma membrane

endocytosis

hydrolase activity

protein domain specific binding

cortical actin cytoskeleton organization

Endocytosis

214136_at 0.393 5.697 2.376 3.107e-02 0.265 -3.748 NUDT13 nudix (nucleoside diphosphate linked moiety X)-type motif 13 10 74540215 W80642 10q22.1 Hs.533657 4

hydrolase activity

metal ion binding

 
230524_at 0.197 4.328 2.375 3.108e-02 0.265 -3.748 MPI mannose phosphate isomerase 15 72969462 AA973383 15q22-qter Hs.75694 18

mannose-6-phosphate isomerase activity

cytoplasm

carbohydrate metabolic process

zinc ion binding

isomerase activity

metal ion binding

Fructose and mannose metabolism

Amino sugar and nucleotide sugar metabolism

Metabolic pathways

226137_at -0.353 7.435 -2.375 3.108e-02 0.265 -3.748 ZFHX3 zinc finger homeobox 3 16 -71374286 AI288759 16q22.3-q23.1 Hs.598297 26

negative regulation of transcription from RNA polymerase II promoter

RNA polymerase II transcription factor activity, enhancer binding

intracellular

nucleus

transcription factor complex

mitochondrion

regulation of transcription, DNA-dependent

zinc ion binding

transcription repressor activity

sequence-specific DNA binding

metal ion binding

 
224693_at 0.462 7.862 2.375 3.108e-02 0.265 -3.748 C20orf108 chromosome 20 open reading frame 108 20 54367389 AI133137 20q13.2 Hs.143736 Hs.593629 6

membrane

integral to membrane

 
230544_at 0.216 5.395 2.375 3.110e-02 0.265 -3.748 RPS6KA4 ribosomal protein S6 kinase, 90kDa, polypeptide 4 11 63883200 AW168626 11q11-q13 Hs.105584 16

nucleotide binding

magnesium ion binding

ribosomal protein S6 kinase activity

protein binding

ATP binding

ATP binding

nucleus

nucleus

regulation of transcription, DNA-dependent

protein amino acid phosphorylation

protein amino acid phosphorylation

protein kinase cascade

transferase activity

mitogen-activated protein kinase p38 binding

mitogen-activated protein kinase p38 binding

MAPK signaling pathway

Neurotrophin signaling pathway

222763_s_at 0.341 7.283 2.375 3.111e-02 0.265 -3.749 WDR33 WD repeat domain 33 2 -128238511, -128209431, -128178277 AW161711 2q14.3 Hs.620490 10

molecular_function

protein binding

nucleus

postreplication repair

spermatogenesis

 
1557616_at 0.324 4.342 2.375 3.111e-02 0.265 -3.749 ZNF496 zinc finger protein 496 1 -245530244 AK098030 1q44 Hs.654803 5

transcription factor activity

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
209584_x_at 0.262 4.994 2.375 3.112e-02 0.265 -3.749 APOBEC3C apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C 22 37740210 AF165520 22q13.1 Hs.441124 31

protein binding

zinc ion binding

hydrolase activity

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines

interspecies interaction between organisms

metal ion binding

Atrazine degradation

236172_at 0.213 3.712 2.375 3.113e-02 0.265 -3.749 LTB4R leukotriene B4 receptor 14 23850544, 23852152 AW206817 14q11.2-q12 Hs.567248 43

nucleotide binding

leukotriene B4 receptor activity

receptor activity

plasma membrane

integral to plasma membrane

cell motion

muscle contraction

inflammatory response

immune response

signal transduction

activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger

Neuroactive ligand-receptor interaction

203347_s_at -0.418 3.808 -2.374 3.116e-02 0.265 -3.750 MTF2 metal response element binding transcription factor 2 1 93317379 NM_007358 1p22.1 Hs.31016 5

DNA binding

protein binding

nucleus

zinc ion binding

metal ion binding

 
209745_at -0.348 6.512 -2.374 3.116e-02 0.265 -3.750 COQ7 coenzyme Q7 homolog, ubiquinone (yeast) 16 18986427 AK024291 16p13.11-p12.3 Hs.157113 18

iron ion binding

nucleus

mitochondrion

ubiquinone biosynthetic process

oxidoreductase activity

protein metabolic process

Ubiquinone and other terpenoid-quinone biosynthesis

Metabolic pathways

212441_at -0.297 9.842 -2.374 3.116e-02 0.265 -3.750 KIAA0232 KIAA0232 4 6835359 D86985 4p16.1 Hs.79276 7

nucleotide binding

ATP binding

 
230377_s_at -0.248 3.815 -2.374 3.117e-02 0.265 -3.750 TBC1D2B TBC1 domain family, member 2B 15 -76074381 BE504351 15q24.3-q25.1 Hs.719242 2

GTPase activator activity

Rab GTPase activator activity

intracellular

regulation of Rab GTPase activity

 
225763_at -0.451 8.096 -2.373 3.120e-02 0.265 -3.751 RCSD1 RCSD domain containing 1 1 165866097 AI659418 1q22-q24 Hs.493867 5    
223644_s_at 0.286 4.429 2.373 3.123e-02 0.266 -3.752 CRYGS crystallin, gamma S 3 -187738925 AF161703 3q25-qter Hs.376209 21

structural constituent of eye lens

 
226032_at 0.274 6.601 2.373 3.124e-02 0.266 -3.752 CASP2 caspase 2, apoptosis-related cysteine peptidase 7 142695523 AU153405 7q34-q35 Hs.368982 83

cysteine-type endopeptidase activity

cellular_component

intracellular

proteolysis

peptidase activity

enzyme binding

protein domain specific binding

identical protein binding

regulation of apoptosis

protein maturation by peptide bond cleavage

 
229016_s_at 0.283 3.511 2.372 3.126e-02 0.266 -3.753 TRERF1 transcriptional regulating factor 1 6 -42300646 AJ277276 6p21.1-p12.1 Hs.485392 10

transcription factor activity

intracellular

nucleus

steroid biosynthetic process

cholesterol catabolic process

multicellular organismal development

transcription factor binding

zinc ion binding

DNA bending activity

RNA polymerase II transcription mediator activity

ligand-dependent nuclear receptor transcription coactivator activity

homeostatic process

regulation of transcription

positive regulation of transcription, DNA-dependent

metal ion binding

regulation of hormone biosynthetic process

 
236436_at -0.351 5.710 -2.372 3.128e-02 0.266 -3.754 SLC25A45 solute carrier family 25, member 45 11 -64899238 AI336233 11q13.1 Hs.661604 4

binding

mitochondrion

mitochondrial inner membrane

transport

membrane

integral to membrane

 
214955_at 0.238 6.566 2.372 3.130e-02 0.266 -3.754 TMPRSS6 transmembrane protease, serine 6 22 -35791424 AI912086 22q12.3 Hs.370885 16

angiogenesis

serine-type endopeptidase activity

plasma membrane

proteolysis

intracellular signaling cascade

peptidase activity

integral to membrane

extracellular matrix organization

fibrinolysis

 
212641_at -0.367 6.102 -2.372 3.131e-02 0.266 -3.754 HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 6 -143114296 AL023584 6q23-q24 Hs.510172 10

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
224747_at -0.621 7.213 -2.372 3.132e-02 0.266 -3.755 UBE2Q2 ubiquitin-conjugating enzyme E2Q family member 2 15 73922676, 73923439 AK000617 15q24.2 Hs.23033 4

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

cytoplasm

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

205913_at 0.648 5.958 2.372 3.132e-02 0.266 -3.755 PLIN1 perilipin 1 15 -88008602 NM_002666 15q26 Hs.103253 42

protein binding

lipid binding

monolayer-surrounded lipid storage body

lipid catabolic process

PPAR signaling pathway

55662_at -0.300 6.188 -2.372 3.132e-02 0.266 -3.755 C10orf76 chromosome 10 open reading frame 76 10 -103595345 H27225 10q24.32 Hs.16004 4

membrane

integral to membrane

 
227540_at 0.177 6.605 2.371 3.133e-02 0.266 -3.755 EEFSEC eukaryotic elongation factor, selenocysteine-tRNA-specific 3 129355002 AW614362 3q21.3 Hs.477498 5

tRNA binding

nucleotide binding

selenocysteine incorporation

translation elongation factor activity

GTPase activity

GTP binding

nucleus

cytoplasm

translational elongation

 
201498_at -0.359 8.884 -2.371 3.135e-02 0.266 -3.756 USP7 ubiquitin specific peptidase 7 (herpes virus-associated) 16 -8893451 AI160440 16p13.3 Hs.706830 38

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

nucleus

ubiquitin-dependent protein catabolic process

protein C-terminus binding

peptidase activity

protein deubiquitination

interspecies interaction between organisms

 
237662_at 0.242 3.852 2.371 3.136e-02 0.266 -3.756 LOC646522 hypothetical LOC646522 11   BE858657 11q25 Hs.560000 1    
221613_s_at -0.279 10.164 -2.371 3.137e-02 0.266 -3.756 ZFAND6 zinc finger, AN1-type domain 6 15 78139075 AL136598 15q25.1 Hs.719106 8

molecular_function

DNA binding

protein binding

cellular_component

signal transduction

biological_process

zinc ion binding

metal ion binding

 
1556285_s_at 0.203 8.790 2.370 3.140e-02 0.266 -3.757 PPA2 pyrophosphatase (inorganic) 2 4 -106509682 AF086012 4q25 Hs.654957 13

magnesium ion binding

inorganic diphosphatase activity

cytoplasm

mitochondrion

phosphate metabolic process

hydrolase activity

Oxidative phosphorylation

211204_at 0.195 4.669 2.370 3.142e-02 0.266 -3.757 ME1 malic enzyme 1, NADP(+)-dependent, cytosolic 6 -83976828 L34035 6q12 Hs.21160 24

malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity

malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity

binding

nucleus

nucleolus

cytoplasm

cytosol

carbohydrate metabolic process

malate metabolic process

NADP biosynthetic process

electron carrier activity

response to hormone stimulus

response to carbohydrate stimulus

oxidoreductase activity

manganese ion binding

ADP binding

metal ion binding

NADP or NADPH binding

NAD or NADH binding

oxidation reduction

Pyruvate metabolism

Carbon fixation in photosynthetic organisms

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Metabolic pathways

PPAR signaling pathway

204782_at -0.683 5.606 -2.370 3.143e-02 0.266 -3.758 MLF1 myeloid leukemia factor 1 3 159771646 NM_022443 3q25.1 Hs.85195 14

myeloid progenitor cell differentiation

DNA binding

nucleus

cytoplasm

transcription

cell cycle

cell cycle arrest

multicellular organismal development

protein domain specific binding

cell differentiation

 
207154_at 0.234 6.219 2.370 3.144e-02 0.266 -3.758 DIO3 deiodinase, iodothyronine, type III 14 101097440 NM_001362 14q32 Hs.49322 19

thyroxine 5'-deiodinase activity

cellular_component

endosome

plasma membrane

biological_process

selenium binding

integral to membrane

thyroxine 5-deiodinase activity

positive regulation of multicellular organism growth

thyroid hormone catabolic process

hormone biosynthetic process

oxidation reduction

 
201217_x_at 0.633 10.045 2.370 3.144e-02 0.266 -3.758 RPL3 ribosomal protein L3 22 -38038832 NM_000967 22q13 Hs.119598 24

RNA binding

structural constituent of ribosome

protein binding

intracellular

nucleolus

cytoplasm

cytosol

ribosome

translational elongation

cytosolic large ribosomal subunit

Ribosome

244233_at 0.163 6.713 2.369 3.145e-02 0.267 -3.758 C18orf10 chromosome 18 open reading frame 10 18 -32630031 AI470549 18q12.2 Hs.695999 5

cytoplasm

cytoskeleton

microtubule

 
203302_at -0.383 6.192 -2.369 3.145e-02 0.267 -3.758 DCK deoxycytidine kinase 4 72078128 NM_000788 4q13.3-q21.1 Hs.709 47

nucleotide binding

deoxycytidine kinase activity

ATP binding

nucleus

cytosol

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

pyrimidine nucleotide metabolic process

kinase activity

transferase activity

phosphotransferase activity, alcohol group as acceptor

nucleoside kinase activity

Purine metabolism

Pyrimidine metabolism

244050_at 0.366 4.417 2.368 3.154e-02 0.267 -3.761 PTPLAD2 protein tyrosine phosphatase-like A domain containing 2 9 -20996364 AI804932 9p21.3 Hs.716678 1

membrane

integral to membrane

 
225416_at -0.221 6.732 -2.368 3.154e-02 0.267 -3.761 RLIM ring finger protein, LIM domain interacting X -73719537 N58188 Xq13-q21 Hs.653288 9

transcription corepressor activity

ubiquitin-protein ligase activity

protein binding

zinc ion binding

negative regulation of transcription

ligase activity

transcriptional repressor complex

modification-dependent protein catabolic process

metal ion binding

 
237202_at 0.200 6.705 2.368 3.155e-02 0.267 -3.761 PGPEP1 pyroglutamyl-peptidase I 19 18312407 AI810572 19p13.11 Hs.131776 8

cytoplasm

proteolysis

peptidase activity

cysteine-type peptidase activity

 
229127_at 0.410 5.218 2.368 3.156e-02 0.267 -3.761 JAM2 junctional adhesion molecule 2 21 25933459 BF195118 21q21.2 Hs.517227 21

plasma membrane

plasma membrane

integral to plasma membrane

tight junction

cell-cell adhesion

cell junction

Cell adhesion molecules (CAMs)

Tight junction

Leukocyte transendothelial migration

Epithelial cell signaling in Helicobacter pylori infection

224948_at 0.220 11.648 2.367 3.159e-02 0.267 -3.762 MRPS24 mitochondrial ribosomal protein S24 7 -43872681 BF970023 7p14 Hs.284286 11

molecular_function

structural constituent of ribosome

protein binding

mitochondrion

mitochondrial large ribosomal subunit

mitochondrial small ribosomal subunit

ribosome

translation

biological_process

 
200065_s_at -0.293 9.894 -2.367 3.160e-02 0.267 -3.762 ARF1 ADP-ribosylation factor 1 1 226336983, 226337473 AF052179 1q42 Hs.286221 97

Golgi membrane

nucleotide binding

GTPase activity

receptor signaling protein activity

protein binding

GTP binding

intracellular

Golgi apparatus

cytosol

cytosol

plasma membrane

retrograde vesicle-mediated transport, Golgi to ER

small GTPase mediated signal transduction

protein transport

membrane organization

vesicle-mediated transport

sarcomere

COPI coating of Golgi vesicle

Vibrio cholerae infection

203524_s_at 0.366 7.661 2.367 3.161e-02 0.267 -3.763 MPST mercaptopyruvate sulfurtransferase 22 35745647 NM_021126 22q13.1 Hs.248267 9

thiosulfate sulfurtransferase activity

cytoplasm

mitochondrion

sulfate transport

cyanate catabolic process

response to toxin

transferase activity

3-mercaptopyruvate sulfurtransferase activity

Cysteine and methionine metabolism

Metabolic pathways

1558148_x_at 0.276 6.099 2.367 3.161e-02 0.267 -3.763 FLJ90757 hypothetical LOC440465 17 -76617527 BG030541 17q25.3 Hs.448889 3    
234421_s_at 0.265 4.947 2.366 3.163e-02 0.267 -3.764 EVC Ellis van Creveld syndrome 4 5763824 AK025394 4p16 Hs.646899 Hs.670028 13

skeletal system development

muscle organ development

membrane

integral to membrane

 
224376_s_at -0.406 10.037 -2.366 3.164e-02 0.268 -3.764 C20orf24 chromosome 20 open reading frame 24 20 34667580, 34667605 AF274948 20q11.23 Hs.584985 7

molecular_function

protein binding

cellular_component

biological_process

 
205063_at -0.420 5.762 -2.366 3.166e-02 0.268 -3.764 SIP1 survival of motor neuron protein interacting protein 1 14 38653238 NM_003616 14q13 Hs.708127 34

spliceosome assembly

spliceosomal snRNP biogenesis

protein binding

nucleus

nucleoplasm

spliceosomal complex

cytoplasm

cytosol

RNA splicing

Cajal body

RNA splicing factor activity, transesterification mechanism

 
221936_x_at 0.235 6.108 2.366 3.168e-02 0.268 -3.765 MRPL41 mitochondrial ribosomal protein L41 9 139566129 AI090841 9q34.3 Hs.44017 10

structural constituent of ribosome

mitochondrion

mitochondrial large ribosomal subunit

ribosome

translation

apoptosis

cell cycle

 
222507_s_at -0.535 7.252 -2.366 3.168e-02 0.268 -3.765 TMEM9B TMEM9 domain family, member B 11 -8925415 AI188389 11p15.3 Hs.501853 7

signal transducer activity

membrane

integral to membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

 
208996_s_at -0.384 8.088 -2.366 3.169e-02 0.268 -3.765 POLR2C polymerase (RNA) II (DNA directed) polypeptide C, 33kDa 16 56054051 BC000409 16q13-q21 Hs.79402 89

nuclear mRNA splicing, via spliceosome

DNA binding

DNA-directed RNA polymerase activity

nucleus

nucleoplasm

cytoplasm

transcription

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

protein dimerization activity

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

Huntington's disease

242230_at -0.375 4.040 -2.365 3.170e-02 0.268 -3.765 ATXN1 ataxin 1 6 -16407321 BF438383 6p23 Hs.434961 Hs.712106 65

RNA binding

nucleus

nucleoplasm

nucleolus

cytoplasm

RNA processing

protein C-terminus binding

cell death

poly(U) RNA binding

adult locomotory behavior

visual learning

nuclear matrix

negative regulation of transcription

transcription repressor activity

poly(G) RNA binding

nuclear RNA export factor complex

negative regulation of phosphorylation

nuclear inclusion body

identical protein binding

negative regulation of insulin-like growth factor receptor signaling pathway

protein self-association

positive regulation of transcription from RNA polymerase II promoter

nuclear export

regulation of excitatory postsynaptic membrane potential

 
200730_s_at -0.704 8.533 -2.365 3.171e-02 0.268 -3.766 PTP4A1 protein tyrosine phosphatase type IVA, member 1 6 64339878 BF576710 6q12 Hs.227777 Hs.706850 28

protein tyrosine phosphatase activity

cytoplasm

early endosome

endoplasmic reticulum

spindle

plasma membrane

protein amino acid dephosphorylation

cell cycle

multicellular organismal development

hydrolase activity

 
225132_at -0.324 8.898 -2.365 3.172e-02 0.268 -3.766 FBXL3 F-box and leucine-rich repeat protein 3 13 -76477390 AI983021 13q22 Hs.508284 Hs.719413 8

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

nucleus

cytoplasm

protein ubiquitination

modification-dependent protein catabolic process

 
204412_s_at 0.273 3.262 2.365 3.173e-02 0.268 -3.766 NEFH neurofilament, heavy polypeptide 22 28206180 NM_021076 22q12.2 Hs.198760 27

microtubule cytoskeleton organization

molecular_function

mitochondrion

neurofilament

nervous system development

cell death

axon

intermediate filament bundle assembly

neurofilament cytoskeleton organization

Amyotrophic lateral sclerosis (ALS)

213554_s_at -0.269 6.317 -2.365 3.174e-02 0.268 -3.767 CDV3 CDV3 homolog (mouse) 3 134775123, 134775990 AI928407 3q22.1 Hs.518265 11

molecular_function

cellular_component

cytoplasm

cell proliferation

 
203311_s_at -0.316 7.503 -2.365 3.175e-02 0.268 -3.767 ARF6 ADP-ribosylation factor 6 14 49429485 M57763 14q21.3 Hs.525330 Hs.682124 86

nucleotide binding

ruffle

liver development

GTPase activity

protein binding

GTP binding

intracellular

membrane fraction

cytoplasm

endosome

Golgi apparatus

plasma membrane

cell cortex

apoptosis

cell motion

cell adhesion

small GTPase mediated signal transduction

protein transport

vesicle-mediated transport

positive regulation of actin filament polymerization

cortical actin cytoskeleton organization

ruffle organization

regulation of Rac protein signal transduction

negative regulation of receptor-mediated endocytosis

Endocytosis

Fc gamma R-mediated phagocytosis

201666_at 0.823 7.062 2.364 3.176e-02 0.268 -3.767 TIMP1 TIMP metallopeptidase inhibitor 1 X 47326633 NM_003254 Xp11.3-p11.23 Hs.522632 231

enzyme inhibitor activity

protein binding

extracellular region

proteinaceous extracellular matrix

metalloendopeptidase inhibitor activity

positive regulation of cell proliferation

erythrocyte maturation

negative regulation of membrane protein ectodomain proteolysis

 
235121_at 0.335 4.590 2.364 3.177e-02 0.268 -3.767 ZNF542 zinc finger protein 542 19 61571279, 61571476 BE966943 19q13.43 Hs.467326 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
222998_at -0.332 9.036 -2.364 3.178e-02 0.268 -3.767 MAF1 MAF1 homolog (S. cerevisiae) 8 145231292 AL136937 8q24.3 Hs.19673 13

intracellular

nucleus

negative regulation of transcription from RNA polymerase III promoter

transcription regulator activity

regulation of transcription

 
203495_at 0.192 5.613 2.364 3.179e-02 0.268 -3.768 LRRC14 leucine rich repeat containing 14 8 145714198 NM_014665 8q24.3 Hs.459391 3

protein binding

 
205638_at 0.279 2.509 2.364 3.180e-02 0.268 -3.768 BAI3 brain-specific angiogenesis inhibitor 3 6 69402352 NM_001704 6q12 Hs.13261 8

plasma membrane

neuropeptide signaling pathway

integral to membrane

integral to membrane

brain-specific angiogenesis inhibitor activity

 
229431_at 0.400 5.397 2.364 3.180e-02 0.268 -3.768 RFXAP regulatory factor X-associated protein 13 36291338 AI742868 13q14 Hs.24422 16

transcription factor activity

transcription coactivator activity

nucleus

Antigen processing and presentation

Primary immunodeficiency

213716_s_at 0.230 4.724 2.363 3.183e-02 0.268 -3.769 SECTM1 secreted and transmembrane 1 17 -77872188 BF939675 17q25 Hs.558009 8

signal transducer activity

cytokine activity

extracellular region

extracellular space

Golgi apparatus

plasma membrane

immune response

mesoderm development

integral to membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

 
225354_s_at 0.320 5.771 2.363 3.183e-02 0.268 -3.769 SH3BGRL2 SH3 domain binding glutamic acid-rich protein like 2 6 80397718 AL035700 6q13-q15 Hs.302772 5

nucleus

SH3 domain binding

 
217834_s_at -0.355 6.533 -2.363 3.183e-02 0.268 -3.769 SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 6 -86380411, -86380411, -86374221, -86374221, -86374221, -86374221 NM_006372 6q14-q15 Hs.571177 33

nucleotide binding

RNA binding

protein binding

nucleus

nucleoplasm

spliceosomal complex

cytoplasm

endoplasmic reticulum

microsome

mRNA processing

poly(A) RNA binding

RNA splicing

interspecies interaction between organisms

 
211448_s_at 0.288 5.744 2.363 3.184e-02 0.268 -3.769 RGS6 regulator of G-protein signaling 6 14 71469538 AF107619 14q24.3 Hs.509872 13

signal transducer activity

GTPase activator activity

cellular_component

cytoplasm

heterotrimeric G-protein complex

intracellular signaling cascade

regulation of G-protein coupled receptor protein signaling pathway

negative regulation of signal transduction

membrane

 
204805_s_at 0.324 6.896 2.363 3.185e-02 0.268 -3.770 H1FX H1 histone family, member X 3 -130516304 NM_006026 3q21.3 Hs.75307 12

nucleosome

DNA binding

nucleus

chromosome

nucleosome assembly

 
242341_x_at 0.225 5.416 2.363 3.187e-02 0.268 -3.770 GLYCTK glycerate kinase 3 52296875, 52296875 AA551847 3p21.1 Hs.415312 9

nucleotide binding

protein binding

ATP binding

cytoplasm

mitochondrion

protein amino acid phosphorylation

glycerate kinase activity

transferase activity

Glycine, serine and threonine metabolism

Glycerolipid metabolism

Glyoxylate and dicarboxylate metabolism

Metabolic pathways

208986_at -0.222 7.508 -2.363 3.187e-02 0.268 -3.770 TCF12 transcription factor 12 15 54998124, 55298946 AL559478 15q21 Hs.511504 32

DNA binding

RNA polymerase II transcription factor activity

protein binding

nucleus

transcription factor complex

regulation of transcription from RNA polymerase II promoter

immune response

multicellular organismal development

muscle organ development

transcription activator activity

regulation of transcription

 
206345_s_at -0.235 2.672 -2.363 3.188e-02 0.268 -3.770 PON1 paraoxonase 1 7 -94765606 NM_000446 7q21.3 Hs.370995 488

aryldialkylphosphatase activity

arylesterase activity

phospholipid binding

extracellular region

extracellular space

microsome

lipid metabolic process

response to external stimulus

response to toxin

positive regulation of cholesterol efflux

hydrolase activity

aromatic compound catabolic process

positive regulation of transporter activity

spherical high-density lipoprotein particle

negative regulation of plasma lipoprotein oxidation

protein homodimerization activity

carboxylic acid catabolic process

organophosphate catabolic process

phosphatidylcholine metabolic process

positive regulation of binding

gamma-Hexachlorocyclohexane degradation

Bisphenol A degradation

Metabolic pathways

1554780_a_at -0.325 5.871 -2.362 3.188e-02 0.268 -3.771 PHTF2 putative homeodomain transcription factor 2 7 77266044, 77266044, 77307382, 77307382 BC032334 7q11.23-q21 Hs.203965 Hs.601884 11

DNA binding

nucleus

endoplasmic reticulum

regulation of transcription

 
237687_at -0.549 5.915 -2.362 3.189e-02 0.268 -3.771 LOC283737 hypothetical protein LOC283737 15   H40786 15q25.3 Hs.31795 1    
210103_s_at 0.301 3.847 2.362 3.191e-02 0.268 -3.771 FOXA2 forkhead box A2 20 -22509641, -22509641 AB028021 20p11 Hs.155651 35

ectoderm formation

RNA polymerase II transcription factor activity, enhancer binding

nucleus

regulation of transcription, DNA-dependent

pattern specification process

blood coagulation

anterior/posterior pattern formation

regulation of specific transcription from RNA polymerase II promoter

cell differentiation in hindbrain

dorsal/ventral neural tube patterning

lung development

epithelial cell differentiation

endocrine pancreas development

sequence-specific DNA binding

cell part

negative regulation of neuron differentiation

positive regulation of neuron differentiation

positive regulation of transcription from RNA polymerase II promoter

cell development

anatomical structure formation involved in morphogenesis

neuron fate specification

branching morphogenesis of a tube

Maturity onset diabetes of the young

201264_at 0.289 7.014 2.362 3.191e-02 0.268 -3.771 COPE coatomer protein complex, subunit epsilon 19 -18871322 NM_007263 19p13.11 Hs.10326 28

structural molecule activity

protein binding

cytoplasm

Golgi apparatus

cytosol

retrograde vesicle-mediated transport, Golgi to ER

retrograde vesicle-mediated transport, Golgi to ER

intra-Golgi vesicle-mediated transport

protein transport

membrane

membrane organization

vesicle-mediated transport

COPI vesicle coat

cytoplasmic vesicle

COPI coating of Golgi vesicle

 
229001_at -0.546 6.812 -2.362 3.192e-02 0.268 -3.771 PPP1R3E protein phosphatase 1, regulatory (inhibitor) subunit 3E 14 -22834952 BE259127 14q11.2 Hs.601513 Hs.672733 3

carbohydrate metabolic process

glycogen metabolic process

 
225340_s_at -0.301 7.527 -2.362 3.192e-02 0.268 -3.771 CAPRIN1 cell cycle associated protein 1 11 34029805, 34029805 BG107845 11p13 Hs.471818 10

protein binding

cytoplasm

cytosol

integral to plasma membrane

dendrite

cell projection

 
233446_at 0.301 3.362 2.362 3.192e-02 0.268 -3.772 ONECUT2 one cut homeobox 2 18 53253914 AU145336 18q21.1-q21.2 Hs.194725 7

liver development

regulation of cell-matrix adhesion

epithelial cell development

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription, DNA-dependent

organ morphogenesis

positive regulation of cell migration

negative regulation of transforming growth factor beta receptor signaling pathway

endocrine pancreas development

cilium assembly

sequence-specific DNA binding

cell fate commitment

positive regulation of transcription from RNA polymerase II promoter

peripheral nervous system neuron development

 
233954_at -0.226 3.409 -2.362 3.193e-02 0.268 -3.772 HIATL1 hippocampus abundant transcript-like 1 9 96176653 AL110135 9q22.32 Hs.555996 Hs.715500 7

transporter activity

protein binding

transport

tetracycline:hydrogen antiporter activity

tetracycline transport

membrane

integral to membrane

response to antibiotic

 
203649_s_at 0.221 5.628 2.361 3.196e-02 0.269 -3.773 PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) 1 -20174511, -20174511 NM_000300 1p35 Hs.466804 94

calcium ion binding

phospholipid binding

extracellular region

extracellular space

mitochondrion

endoplasmic reticulum

phospholipid metabolic process

positive regulation of foam cell differentiation

membrane

lipid catabolic process

hydrolase activity

low-density lipoprotein particle remodeling

somatic stem cell maintenance

phosphatidic acid metabolic process

calcium-dependent phospholipase A2 activity

negative regulation of epithelial cell proliferation

positive regulation of inflammatory response

defense response to Gram-positive bacterium

Glycerophospholipid metabolism

Ether lipid metabolism

Arachidonic acid metabolism

Linoleic acid metabolism

alpha-Linolenic acid metabolism

Metabolic pathways

MAPK signaling pathway

Vascular smooth muscle contraction

VEGF signaling pathway

Fc epsilon RI signaling pathway

Long-term depression

GnRH signaling pathway

218078_s_at -0.301 6.491 -2.361 3.198e-02 0.269 -3.773 ZDHHC3 zinc finger, DHHC-type containing 3 3 -44931757 NM_016598 3p21.31 Hs.61430 8

Golgi apparatus

zinc ion binding

acyltransferase activity

membrane

integral to membrane

transferase activity

metal ion binding

 
211562_s_at -0.389 4.287 -2.361 3.198e-02 0.269 -3.773 LMOD1 leiomodin 1 (smooth muscle) 1 -200132206 BC001755 1q32 Hs.519075 9

tropomyosin binding

membrane fraction

cytoplasm

cytoskeleton

 
224685_at 0.391 7.902 2.361 3.199e-02 0.269 -3.774 MLLT4 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 6 167970519, 167970519, 167970519 AI675354 6q27 Hs.644024 Hs.708726 51

cell-cell junction

adherens junction

cell adhesion

signal transduction

cell-cell signaling

protein C-terminus binding

Adherens junction

Tight junction

Leukocyte transendothelial migration

213422_s_at 0.258 7.113 2.361 3.200e-02 0.269 -3.774 MXRA8 matrix-remodelling associated 8 1 -1277933 AW888223 1p36.33 Hs.558570 6

membrane

integral to membrane

 
206277_at -0.398 7.066 -2.360 3.201e-02 0.269 -3.774 P2RY2 purinergic receptor P2Y, G-protein coupled, 2 11 72606991, 72607149 NM_002564 11q13.5-q14.1 Hs.339 43

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

cellular ion homeostasis

signal transduction

activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger

purinergic nucleotide receptor activity, G-protein coupled

Neuroactive ligand-receptor interaction

223495_at 0.350 4.972 2.360 3.205e-02 0.269 -3.775 CCDC8 coiled-coil domain containing 8 19 -51605426 AI970823 19q13.32 Hs.97876 4

plasma membrane

 
221944_at -0.256 4.954 -2.360 3.205e-02 0.269 -3.775 FLJ42627 hypothetical LOC645644 16 2628983 N56912 16p13.3 Hs.597810 Hs.677234 1    
226644_at 0.335 7.357 2.359 3.208e-02 0.269 -3.776 MIB2 mindbomb homolog 2 (Drosophila) 1 1540746 BE222279 1p36.33 Hs.135805 Hs.593430 14

actin binding

ubiquitin-protein ligase activity

signal transducer activity

protein binding

cytoplasm

endosome

Notch signaling pathway

zinc ion binding

protein ubiquitination

ligase activity

modification-dependent protein catabolic process

positive regulation of I-kappaB kinase/NF-kappaB cascade

metal ion binding

 
242234_at 0.459 5.402 2.359 3.208e-02 0.269 -3.776 XAF1 XIAP associated factor 1 17 6599879 AI859280 17p13.1 Hs.441975 27

nucleus

cytoplasm

mitochondrion

apoptosis

zinc ion binding

metal ion binding

 
235166_at -0.196 4.133 -2.359 3.209e-02 0.269 -3.776 ZNF148 zinc finger protein 148 3 -126427202 T08836 3q21 Hs.592591 34

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

specific RNA polymerase II transcription factor activity

intracellular

nucleus

DNA-directed RNA polymerase II, core complex

nucleolus

Golgi apparatus

cellular defense response

gamete generation

zinc ion binding

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

 
219703_at 0.305 3.687 2.359 3.210e-02 0.269 -3.776 MNS1 meiosis-specific nuclear structural 1 15 -54508220 NM_018365 15q21.3 Hs.444483 6

nucleus

nuclear envelope

intermediate filament

meiosis

 
223266_at -0.378 8.997 -2.359 3.211e-02 0.269 -3.777 STRADB STE20-related kinase adaptor beta 2 202024636 AB038950 2q33.1 Hs.652338 12

nucleotide binding

protein kinase activity

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

protein export from nucleus

cell cycle

activation of protein kinase activity

 
209916_at 0.301 6.714 2.359 3.213e-02 0.269 -3.777 DHTKD1 dehydrogenase E1 and transketolase domain containing 1 10 12150939 BC002477 10p14 Hs.104980 Hs.711138 3

oxoglutarate dehydrogenase (succinyl-transferring) activity

mitochondrion

glycolysis

oxidoreductase activity

thiamin pyrophosphate binding

oxidation reduction

 
206674_at 0.220 4.624 2.359 3.213e-02 0.269 -3.777 FLT3 fms-related tyrosine kinase 3 13 -27475410 NM_004119 13q12 Hs.507590 213

nucleotide binding

receptor activity

vascular endothelial growth factor receptor activity

ATP binding

integral to plasma membrane

protein amino acid phosphorylation

transmembrane receptor protein tyrosine kinase signaling pathway

positive regulation of cell proliferation

membrane

transferase activity

hemopoiesis

Cytokine-cytokine receptor interaction

Hematopoietic cell lineage

Pathways in cancer

Acute myeloid leukemia

211928_at -0.244 8.973 -2.358 3.215e-02 0.269 -3.778 DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 14 101500617 AB002323 14q32 14q32.3-qter Hs.649497 33

nucleotide binding

microtubule motor activity

protein binding

ATP binding

cytoplasm

Golgi apparatus

cytoplasmic dynein complex

microtubule

microtubule-based movement

mitotic spindle organization

ATPase activity, coupled

 
210659_at 0.248 5.257 2.358 3.216e-02 0.269 -3.778 CMKLR1 chemokine-like receptor 1 12 -107205951, -107205951 U79526 12q24.1 Hs.197143 14

skeletal system development

receptor activity

G-protein coupled receptor activity

chemokine receptor activity

plasma membrane

integral to plasma membrane

chemotaxis

immune response

signal transduction

G-protein coupled receptor protein signaling pathway

 
226529_at -0.374 9.306 -2.358 3.218e-02 0.270 -3.779 TMEM106B transmembrane protein 106B 7 12217372 BF513060 7p21.3 Hs.396358 10

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
236123_at 0.256 3.782 2.357 3.219e-02 0.270 -3.779 ST7L suppression of tumorigenicity 7 like 1 -112885935, -112867663 BE220209 1p13.2 Hs.201921 6

membrane

integral to membrane

 
1556181_at 0.173 5.797 2.357 3.221e-02 0.270 -3.779 hCG_20426 hypothetical protein LOC441869 1 -1343664 BC018095 1p36.33 Hs.381222 3    
204701_s_at 0.195 6.140 2.357 3.222e-02 0.270 -3.780 STOML1 stomatin (EPB72)-like 1 15 -72062612 NM_004809 15q24-q25 Hs.194816 9

molecular_function

sterol carrier activity

cellular_component

biological_process

membrane

integral to membrane

 
204181_s_at -0.299 7.038 -2.357 3.223e-02 0.270 -3.780 ZBTB43 zinc finger and BTB domain containing 43 9 128607105 T90308 9q33-q34 Hs.355581 Hs.718657 7

DNA binding

protein binding

intracellular

nucleus

nucleolus

zinc ion binding

regulation of transcription

metal ion binding

 
208909_at 0.196 12.479 2.357 3.223e-02 0.270 -3.780 UQCRFS1 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 19 -34390006 BC000649 19q12-q13.1 Hs.170107 10

iron ion binding

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex III

transport

ubiquinol-cytochrome-c reductase activity

electron carrier activity

membrane

integral to membrane

oxidoreductase activity, acting on diphenols and related substances as donors

electron transport chain

metal ion binding

2 iron, 2 sulfur cluster binding

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Cardiac muscle contraction

Alzheimer's disease

Parkinson's disease

Huntington's disease

218759_at 0.213 5.583 2.357 3.225e-02 0.270 -3.781 DVL2 dishevelled, dsh homolog 2 (Drosophila) 17 -7069384 NM_004422 17p13.2 Hs.118640 25

neural tube closure

signal transducer activity

intracellular

cytoplasm

intracellular signaling cascade

multicellular organismal development

segment specification

imaginal disc pattern formation

heart development

Wnt receptor signaling pathway

identical protein binding

Wnt signaling pathway

Notch signaling pathway

Melanogenesis

Pathways in cancer

Colorectal cancer

Basal cell carcinoma

225222_at -0.332 6.958 -2.356 3.226e-02 0.270 -3.781 HIAT1 hippocampus abundant transcript 1 1 100276376 AI243268 1p21.2 Hs.124156 5

transporter activity

transport

tetracycline:hydrogen antiporter activity

tetracycline transport

membrane

integral to membrane

response to antibiotic

 
233082_at 0.389 4.387 2.356 3.229e-02 0.270 -3.782 ZNF630 zinc finger protein 630 X -47802510 AK000580 Xp11.3-p11.1 Hs.650883 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
225982_at 0.243 6.432 2.356 3.230e-02 0.270 -3.782 UBTF upstream binding transcription factor, RNA polymerase I 17 -39637926, -39637926, -39637926 BG341575 17q21.3 Hs.89781 53

DNA binding

RNA polymerase I transcription factor activity

protein binding

nucleus

nucleoplasm

nucleolus

regulation of transcription from RNA polymerase I promoter

regulation of transcription

 
244675_at 0.212 3.368 2.355 3.233e-02 0.270 -3.783 RGS8 regulator of G-protein signaling 8 1 -180882414 R37101 1q25 Hs.20982 Hs.458417 14

signal transducer activity

negative regulation of signal transduction

 
228776_at 0.338 6.271 2.355 3.234e-02 0.270 -3.783 GJC1 gap junction protein, gamma 1, 45kDa 17 -40231341, -40231341 AA430014 17q21.31 Hs.532593 Hs.712052 18

vasculogenesis

protein binding

plasma membrane

connexon complex

transport

muscle contraction

cell-cell junction assembly

synaptic transmission

visual perception

integral to membrane

cell junction

cell development

cardiac muscle tissue development

 
243880_at -0.622 3.535 -2.355 3.234e-02 0.270 -3.783 GOSR2 golgi SNAP receptor complex member 2 17 42355484, 42355484 AW205003 17q21 Hs.463278 12

Golgi membrane

transporter activity

endoplasmic reticulum membrane

Golgi apparatus

intracellular protein transport

ER to Golgi vesicle-mediated transport

membrane fusion

membrane

integral to membrane

vesicle-mediated transport

SNARE interactions in vesicular transport

229025_s_at 0.297 9.138 2.355 3.238e-02 0.270 -3.784 IMMP1L IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) 11 -31410524 AW008627 11p13 Hs.502223 5

mitochondrion

mitochondrial inner membrane

proteolysis

peptidase activity

serine-type peptidase activity

membrane

 
1561252_at -0.190 3.855 -2.354 3.239e-02 0.270 -3.785 LOC648691 hypothetical LOC648691 22 21231755 BC040190   Hs.623889      
212377_s_at 0.348 6.158 2.354 3.240e-02 0.270 -3.785 NOTCH2 Notch homolog 2 (Drosophila) 1 -120255698 AU158495 1p13-p11 Hs.487360 73

cell fate determination

ligand-regulated transcription factor activity

receptor activity

calcium ion binding

protein binding

protein binding

nucleus

plasma membrane

integral to plasma membrane

regulation of transcription, DNA-dependent

anti-apoptosis

induction of apoptosis

cell cycle arrest

Notch signaling pathway

multicellular organismal development

nervous system development

negative regulation of cell proliferation

organ morphogenesis

cell surface

cell growth

stem cell maintenance

hemopoiesis

cell differentiation

positive regulation of Ras protein signal transduction

protein heterodimerization activity

regulation of developmental process

Dorso-ventral axis formation

Notch signaling pathway

1559479_at 0.271 3.637 2.354 3.240e-02 0.270 -3.785 PI4K2B phosphatidylinositol 4-kinase type 2 beta 4 24844750 BC038425 4p15.2 Hs.191701 9

nucleotide binding

1-phosphatidylinositol 4-kinase activity

ATP binding

cytoplasm

membrane

kinase activity

transferase activity

 
203257_s_at 0.231 5.685 2.354 3.241e-02 0.270 -3.785 C11orf49 chromosome 11 open reading frame 49 11 46914826, 46914826 NM_024113 11p11.2 Hs.368296 11    
1555722_at 0.307 3.661 2.354 3.241e-02 0.270 -3.785 SCAMPER sphingolipid Ca2+ release mediating protein of endoplasmic reticulum     AY163814     1    
213618_at 0.289 3.730 2.354 3.242e-02 0.271 -3.785 ARAP2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 4 -35744016 AB011152 4p14 Hs.479451 9

phosphatidylinositol-3,4,5-trisphosphate binding

intracellular

cytoplasm

signal transduction

ARF GTPase activator activity

zinc ion binding

regulation of ARF GTPase activity

metal ion binding

Endocytosis

225288_at 0.407 5.649 2.354 3.244e-02 0.271 -3.786 COL27A1 collagen, type XXVII, alpha 1 9 115958051 AI949136 9q32 Hs.494892 8

extracellular matrix structural constituent

extracellular region

collagen

cell adhesion

 
219354_at -0.254 5.446 -2.353 3.245e-02 0.271 -3.786 KLHL26 kelch-like 26 (Drosophila) 19 18608837 NM_018316 19p13.11 Hs.250632 6

protein binding

 
203950_s_at -0.239 6.514 -2.353 3.247e-02 0.271 -3.787 CLCN6 chloride channel 6 1 11788793, 11788793, 11788793 NM_001286 1p36 Hs.193043 13

nucleotide binding

ion channel activity

voltage-gated chloride channel activity

ATP binding

endosome

ion transport

chloride transport

cell volume homeostasis

signal transduction

antiporter activity

membrane

integral to membrane

chloride ion binding

 
207266_x_at 0.278 7.586 2.353 3.249e-02 0.271 -3.787 RBMS1 RNA binding motif, single stranded interacting protein 1 2 -160836908 NM_016837 2q24.2 Hs.470412 12

DNA binding

double-stranded DNA binding

single-stranded DNA binding

RNA binding

cellular_component

nucleus

DNA replication

RNA processing

 
210944_s_at -0.391 11.557 -2.353 3.250e-02 0.271 -3.787 CAPN3 calpain 3, (p94) 15 40427592, 40438989, 40481879, 40484268 BC003169 15q15.1-q21.1 Hs.143261 66

calcium-dependent cysteine-type endopeptidase activity

signal transducer activity

calcium ion binding

intracellular

cytoplasm

proteolysis

muscle organ development

peptidase activity

 
223496_s_at 0.243 4.697 2.353 3.250e-02 0.271 -3.787 CCDC8 coiled-coil domain containing 8 19 -51605426 AL136609 19q13.32 Hs.97876 4

plasma membrane

 
32069_at -0.276 7.040 -2.353 3.250e-02 0.271 -3.788 N4BP1 NEDD4 binding protein 1 16 -47130137 AB014515 16q12.1 Hs.511839 6

nucleus

 
227809_at -0.446 7.147 -2.352 3.252e-02 0.271 -3.788 ZC3H6 zinc finger CCCH-type containing 6 2 112749648 AI703114 2q13 Hs.190477 5

nucleic acid binding

zinc ion binding

metal ion binding

 
203140_at -0.922 10.442 -2.352 3.253e-02 0.271 -3.788 BCL6 B-cell CLL/lymphoma 6 3 -188921858, -188921858, -188921858 NM_001706 3q27 Hs.478588 139

protein import into nucleus, translocation

negative regulation of transcription from RNA polymerase II promoter

cell morphogenesis

negative regulation of cell-matrix adhesion

regulation of germinal center formation

negative regulation of T-helper 2 type immune response

negative regulation of B cell apoptosis

transcription factor activity

protein binding

intracellular

nucleus

replication fork

response to DNA damage stimulus

spermatogenesis

protein localization

zinc ion binding

negative regulation of cell proliferation

transcription repressor activity

transcription repressor activity

actin cytoskeleton organization

B cell differentiation

negative regulation of cell growth

positive regulation of B cell proliferation

chromatin DNA binding

regulation of Rho GTPase activity

negative regulation of mast cell cytokine production

negative regulation of Rho protein signal transduction

positive regulation of apoptosis

negative regulation of apoptosis

regulation of memory T cell differentiation

sequence-specific DNA binding

regulation of transcription

negative regulation of cell differentiation

negative regulation of T-helper 2 cell differentiation

negative regulation of S phase of mitotic cell cycle

metal ion binding

negative regulation of isotype switching to IgE isotypes

erythrocyte development

regulation of inflammatory response

positive regulation of cell motion

 
214666_x_at -0.430 4.839 -2.352 3.254e-02 0.271 -3.789 IREB2 iron-responsive element binding protein 2 15 76517572 AI204981 15q25.1 Hs.436031 28

RNA binding

iron ion binding

cytoplasm

cytosol

regulation of translation

protoporphyrinogen IX biosynthetic process

cellular iron ion homeostasis

metabolic process

post-embryonic development

regulation of gene expression

iron-responsive element binding

erythrocyte homeostasis

metal ion binding

intestinal absorption

4 iron, 4 sulfur cluster binding

 
235201_at -0.742 6.351 -2.352 3.255e-02 0.271 -3.789 FOXP2 forkhead box P2 7 113842287 AW167727 7q31 Hs.656280 50

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

caudate nucleus development

putamen development

protein homodimerization activity

sequence-specific DNA binding

metal ion binding

 
224622_at -0.262 7.355 -2.352 3.255e-02 0.271 -3.789 TBC1D14 TBC1 domain family, member 14 4 6962071, 6962395, 7039789 AB037743 4p16.1 Hs.518611 7

GTPase activator activity

Rab GTPase activator activity

intracellular

regulation of Rab GTPase activity

 
1562988_at -0.192 3.259 -2.352 3.255e-02 0.271 -3.789 ZNF397OS zinc finger protein 397 opposite strand 18 -31086816 AF373035 18q12.2 Hs.464896 3

transcription factor activity

intracellular

nucleus

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
230351_at 0.343 5.499 2.352 3.256e-02 0.271 -3.789 LOC283481 hypothetical protein LOC283481 13   AW070248 13q33.1 Hs.646604 2    
203554_x_at 0.351 5.787 2.351 3.258e-02 0.271 -3.790 PTTG1 pituitary tumor-transforming 1 5 159781442 NM_004219 5q35.1 Hs.350966 88

transcription factor activity

cysteine-type endopeptidase inhibitor activity

protein binding

nucleus

cytoplasm

cytosol

DNA repair

transcription from RNA polymerase II promoter

response to DNA damage stimulus

cell cycle

chromosome segregation

mitosis

spermatogenesis

SH3 domain binding

chromosome organization

cell division

Cell cycle

210955_at 0.268 4.577 2.351 3.260e-02 0.271 -3.790 CASP10 caspase 10, apoptosis-related cysteine peptidase 2 201755865, 201755865 U86214 2q33-q34 Hs.5353 72

cysteine-type endopeptidase activity

proteolysis

peptidase activity

induction of apoptosis by extracellular signals

identical protein binding

regulation of apoptosis

Apoptosis

RIG-I-like receptor signaling pathway

223084_s_at -0.415 8.721 -2.351 3.260e-02 0.271 -3.790 CCNDBP1 cyclin D-type binding-protein 1 15 41264757, 41265429 AF246144 15q14-q15 Hs.36794 Hs.368642 Hs.688009 19

protein binding

nucleus

cytoplasm

cell cycle

 
218446_s_at -0.362 6.287 -2.350 3.264e-02 0.271 -3.791 FAM18B family with sequence similarity 18, member B 17 18625306 NM_016078 17p11.2 Hs.87295 3

membrane

integral to membrane

 
220451_s_at 0.275 5.804 2.350 3.265e-02 0.271 -3.792 BIRC7 baculoviral IAP repeat-containing 7 20 61337720 NM_022161 20q13.3 Hs.256126 36

intracellular

nucleus

cytoplasm

DNA fragmentation involved in apoptosis

apoptosis

anti-apoptosis

activation of JUN kinase activity

zinc ion binding

enzyme binding

metal ion binding

 
204462_s_at 0.231 4.474 2.350 3.266e-02 0.271 -3.792 SLC16A2 solute carrier family 16, member 2 (monocarboxylic acid transporter 8) X 73557809 NM_006517 Xq13.2 Hs.75317 28

transporter activity

membrane fraction

plasma membrane

integral to plasma membrane

transport

monocarboxylic acid transmembrane transporter activity

symporter activity

monocarboxylic acid transport

 
235313_at -0.675 11.573 -2.350 3.269e-02 0.271 -3.793 NRAP nebulin-related anchoring protein 10 -115338572 AA195854 10q24-q26 Hs.268788 14

actin binding

actin binding

protein binding

fascia adherens

muscle tendon junction

biological_process

zinc ion binding

metal ion binding

muscle alpha-actinin binding

 
1556607_at 0.271 4.086 2.350 3.269e-02 0.271 -3.793 EHD4 EH-domain containing 4 15 -39978932 AK074621 15q11.1 Hs.143703 11

nucleotide binding

nucleic acid binding

GTPase activity

calcium ion binding

protein binding

ATP binding

GTP binding

nucleus

endosome

endoplasmic reticulum

membrane

Endocytosis

208850_s_at 0.323 5.513 2.349 3.270e-02 0.271 -3.793 THY1 Thy-1 cell surface antigen 11 -118793865 AL558479 11q22.3-q23 Hs.644697 Hs.719101 45

angiogenesis

Rho GTPase activator activity

integrin binding

protein binding

endoplasmic reticulum

cytosol

plasma membrane

integral to plasma membrane

negative regulation of protein kinase activity

cytoskeleton organization

external side of plasma membrane

cell-cell adhesion

negative regulation of cell migration

dendrite

growth cone

anchored to membrane

anchored to external side of plasma membrane

GPI anchor binding

positive regulation of GTPase activity

membrane raft

retinal cone cell development

focal adhesion formation

negative regulation of axonogenesis

negative regulation of T cell receptor signaling pathway

positive regulation of T cell activation

positive regulation of release of sequestered calcium ion into cytosol

Leukocyte transendothelial migration

215265_at 0.209 6.065 2.349 3.271e-02 0.271 -3.793 EMX1 empty spiracles homeobox 1 2 72998111 BF515060 2p14-p13 Hs.516090 9

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

brain development

post-embryonic development

cerebral cortex development

neuron differentiation

response to drug

sequence-specific DNA binding

 
209529_at 0.275 4.155 2.349 3.271e-02 0.271 -3.793 PPAP2C phosphatidic acid phosphatase type 2C 19 -232043, -232043 AF047760 19p13 Hs.465506 10

phosphoprotein phosphatase activity

cytosol

phosphatidate phosphatase activity

phosphatidate phosphatase activity

membrane

integral to membrane

hydrolase activity

Glycerolipid metabolism

Glycerophospholipid metabolism

Ether lipid metabolism

Sphingolipid metabolism

Metabolic pathways

Fc gamma R-mediated phagocytosis

1554703_at 0.270 4.650 2.349 3.273e-02 0.271 -3.794 ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 8 1759555 BC040474 8p23 Hs.98594 9

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

intracellular

regulation of Rho protein signal transduction

 
201434_at -0.234 8.388 -2.349 3.274e-02 0.271 -3.794 TTC1 tetratricopeptide repeat domain 1 5 159368757 NM_003314 5q33.3 Hs.519718 10

protein folding

unfolded protein binding

 
209030_s_at 0.451 6.414 2.349 3.274e-02 0.272 -3.794 CADM1 cell adhesion molecule 1 11 -114549554 NM_014333 11q23.2 Hs.370510 50

T cell mediated cytotoxicity

receptor binding

receptor binding

plasma membrane

cell-cell junction

apoptosis

immune response

cell adhesion

homophilic cell adhesion

heterophilic cell adhesion

multicellular organismal development

spermatogenesis

protein C-terminus binding

cell recognition

cell recognition

integral to membrane

basolateral plasma membrane

cell differentiation

PDZ domain binding

susceptibility to natural killer cell mediated cytotoxicity

susceptibility to natural killer cell mediated cytotoxicity

protein homodimerization activity

positive regulation of cytokine secretion

activated T cell proliferation

detection of stimulus

detection of stimulus

Cell adhesion molecules (CAMs)

1569781_at -0.200 3.312 -2.349 3.275e-02 0.272 -3.794 LOC285423 hypothetical LOC285423 4   BC031092 4q31.23 Hs.591689      
203931_s_at 0.310 8.923 2.349 3.276e-02 0.272 -3.795 MRPL12 mitochondrial ribosomal protein L12 17 77280811 NM_002949 17q25 Hs.109059 11

RNA binding

structural constituent of ribosome

protein binding

intracellular

mitochondrion

mitochondrial large ribosomal subunit

ribosome

transcription from mitochondrial promoter

translation

positive regulation of transcription, DNA-dependent

 
218469_at -0.796 4.026 -2.348 3.277e-02 0.272 -3.795 GREM1 gremlin 1, cysteine knot superfamily, homolog (Xenopus laevis) 15 30797496 NM_013372 15q13-q15 Hs.40098 28

cytokine activity

protein binding

extracellular region

extracellular space

multicellular organismal development

nervous system development

 
218356_at -0.250 7.382 -2.348 3.279e-02 0.272 -3.795 FTSJ2 FtsJ homolog 2 (E. coli) 7 -2240451 NM_013393 7p22 Hs.279877 4

nucleic acid binding

nucleus

nucleolus

rRNA processing

RNA methyltransferase activity

transferase activity

rRNA methylation

methylation

 
219984_s_at -0.375 8.399 -2.348 3.279e-02 0.272 -3.795 HRASLS HRAS-like suppressor 3 194441611 NM_020386 3q29 Hs.36761 4

nuclear envelope lumen

cytoplasm

 
204547_at -0.647 8.571 -2.348 3.279e-02 0.272 -3.795 RAB40B RAB40B, member RAS oncogene family 17 -78208232 NM_006822 17q25.3 Hs.484068 5

nucleotide binding

GTP binding

plasma membrane

small GTPase mediated signal transduction

protein transport

modification-dependent protein catabolic process

 
216347_s_at 0.217 6.265 2.347 3.284e-02 0.272 -3.797 PPP1R13B protein phosphatase 1, regulatory (inhibitor) subunit 13B 14 -103269840 AK023188 14q32.33 Hs.709297 13

protein binding

nucleus

cytoplasm

apoptosis

induction of apoptosis

negative regulation of cell cycle

 
233158_at 0.273 5.039 2.347 3.285e-02 0.272 -3.797 KRT82 keratin 82 12 -51074001 AI082251 12q13 Hs.134640 5

protein binding

cellular_component

biological_process

structural constituent of epidermis

keratin filament

 
220907_at 0.156 4.761 2.347 3.285e-02 0.272 -3.797 GPR110 G protein-coupled receptor 110 6 -47095580, -47075771 NM_025048 6p12.3 Hs.256897 11

G-protein coupled receptor activity

G-protein coupled receptor activity

plasma membrane

neuropeptide signaling pathway

integral to membrane

integral to membrane

 
223289_s_at -0.742 7.232 -2.347 3.288e-02 0.272 -3.798 USP38 ubiquitin specific peptidase 38 4 144325519 AF211481   Hs.480848 7

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
201210_at -0.425 9.919 -2.347 3.288e-02 0.272 -3.798 DDX3X DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked X 41077594 NM_001356 Xp11.3-p11.23 Hs.719127 34

nucleotide binding

DNA binding

RNA binding

ATP-dependent RNA helicase activity

helicase activity

protein binding

ATP binding

nucleus

cytoplasm

plasma membrane

nuclear speck

hydrolase activity

interspecies interaction between organisms

RIG-I-like receptor signaling pathway

235245_at 0.249 5.176 2.346 3.289e-02 0.272 -3.798 TMEM92 transmembrane protein 92 17 45706831 AI990471 17q21.33 Hs.224630 4

membrane

integral to membrane

 
207532_at 0.255 5.294 2.346 3.290e-02 0.272 -3.798 CRYGD crystallin, gamma D 2 -208694575 NM_006891 2q33-q35 Hs.546247 49

structural constituent of eye lens

protein binding

soluble fraction

visual perception

cellular response to reactive oxygen species

response to stimulus

 
223408_s_at -0.264 6.351 -2.346 3.290e-02 0.272 -3.798 FOXK2 forkhead box K2 17 78070882 N49941 17q25 Hs.591140 11

magnesium ion binding

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription from RNA polymerase II promoter

sequence-specific DNA binding

 
204931_at 0.314 3.536 2.346 3.291e-02 0.272 -3.799 TCF21 transcription factor 21 6 134251951, 134251952 NM_003206 6pter-qter Hs.78061 16

branching involved in ureteric bud morphogenesis

DNA binding

protein binding

nucleus

mesoderm development

sex differentiation

organ morphogenesis

transcription regulator activity

regulation of transcription

 
212039_x_at 0.604 10.236 2.346 3.291e-02 0.272 -3.799 RPL3 ribosomal protein L3 22 -38038832 BG339228 22q13 Hs.119598 24

RNA binding

structural constituent of ribosome

protein binding

intracellular

nucleolus

cytoplasm

cytosol

ribosome

translational elongation

cytosolic large ribosomal subunit

Ribosome

233557_s_at -0.192 5.174 -2.346 3.291e-02 0.272 -3.799 MON1B MON1 homolog B (yeast) 16 75782336 AK023374 16q23.1 Hs.513743 6    
228393_s_at 0.329 8.085 2.346 3.291e-02 0.272 -3.799 ZNF302 zinc finger protein 302 19 39860406 BF508739 19q13.11 Hs.436350 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
227476_at -0.314 6.861 -2.346 3.292e-02 0.272 -3.799 LPGAT1 lysophosphatidylglycerol acyltransferase 1 1 -209983422 AW576195 1q32 Hs.497674 6

molecular_function

cytoplasm

endoplasmic reticulum

metabolic process

acyltransferase activity

phospholipid biosynthetic process

membrane

integral to membrane

transferase activity

 
212128_s_at -0.275 6.317 -2.346 3.292e-02 0.272 -3.799 DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1) 3 49482568 AW411370 3p21 Hs.707131 Hs.76111 56

morphogenesis of an epithelial sheet

calcium ion binding

protein binding

extracellular region

basement membrane

extracellular space

membrane fraction

cytoplasm

integral to plasma membrane

protein complex assembly

muscle contraction

actin cytoskeleton

dystroglycan complex

sarcolemma

membrane raft

ECM-receptor interaction

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

205331_s_at 0.198 7.232 2.346 3.294e-02 0.272 -3.800 REEP2 receptor accessory protein 2 5 137802674 NM_016606 5q31 Hs.416090 10

membrane

integral to membrane

 
217767_at 0.431 7.580 2.346 3.295e-02 0.272 -3.800 C3 complement component 3 19 -6628845 NM_000064 19p13.3-p13.2 Hs.529053 215

positive regulation of type IIa hypersensitivity

endopeptidase inhibitor activity

receptor binding

extracellular region

extracellular region

extracellular space

inflammatory response

complement activation, alternative pathway

complement activation, alternative pathway

complement activation, classical pathway

signal transduction

G-protein coupled receptor protein signaling pathway

positive regulation of phagocytosis

Complement and coagulation cascades

Systemic lupus erythematosus

203179_at 0.255 7.076 2.345 3.300e-02 0.272 -3.801 GALT galactose-1-phosphate uridylyltransferase 9 34636634 NM_000155 9p13 Hs.522090 72

iron ion binding

cytosol

carbohydrate metabolic process

galactose metabolic process

UDP-glucose:hexose-1-phosphate uridylyltransferase activity

UDP-glucose:hexose-1-phosphate uridylyltransferase activity

zinc ion binding

transferase activity

nucleotidyltransferase activity

metal ion binding

Galactose metabolism

Amino sugar and nucleotide sugar metabolism

Metabolic pathways

233564_s_at 0.286 4.917 2.345 3.300e-02 0.272 -3.801 CDADC1 cytidine and dCMP deaminase domain containing 1 13 48720103 AL138875 13q14.2 Hs.388220 2

zinc ion binding

hydrolase activity

metal ion binding

 
203781_at 0.205 11.411 2.345 3.301e-02 0.272 -3.801 MRPL33 mitochondrial ribosomal protein L33 2 27848087 NM_004891 2p21 Hs.515879 8

structural constituent of ribosome

intracellular

mitochondrion

ribosome

translation

 
226919_at -0.254 6.544 -2.344 3.302e-02 0.272 -3.802 LYRM2 LYR motif containing 2 6 -90398663 AA447709 6q14.2-q16.1 Hs.177275 5    
235450_at -0.556 4.111 -2.344 3.302e-02 0.272 -3.802 FBXL4 F-box and leucine-rich repeat protein 4 6 -99428321 BF571480 6q16.1-q16.3 Hs.536850 6

ubiquitin ligase complex

nucleus

cytoplasm

ubiquitin-dependent protein catabolic process

 
228253_at 0.259 4.842 2.344 3.303e-02 0.272 -3.802 LOXL3 lysyl oxidase-like 3 2 -74613453 AI917716 2p13 Hs.469045 10

protein-lysine 6-oxidase activity

scavenger receptor activity

copper ion binding

extracellular region

extracellular space

biological_process

membrane

oxidoreductase activity

metal ion binding

oxidation reduction

 
223709_s_at 0.277 4.490 2.344 3.304e-02 0.272 -3.802 WNT10A wingless-type MMTV integration site family, member 10A 2 219453498 AY009400 2q35 Hs.121540 9

signal transducer activity

extracellular region

proteinaceous extracellular matrix

Wnt receptor signaling pathway, calcium modulating pathway

multicellular organismal development

Wnt signaling pathway

Hedgehog signaling pathway

Melanogenesis

Pathways in cancer

Basal cell carcinoma

206220_s_at 0.241 6.203 2.344 3.305e-02 0.272 -3.802 RASA3 RAS p21 protein activator 3 13 -113765295 NM_007368 13q34 Hs.593075 14

GTPase activator activity

intracellular

plasma membrane

intracellular signaling cascade

zinc ion binding

calcium-release channel activity

intrinsic to internal side of plasma membrane

metal ion binding

regulation of small GTPase mediated signal transduction

 
204017_at 0.440 4.302 2.344 3.306e-02 0.272 -3.803 KDELR3 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 22 37194028, 37194028 NM_006855 22q13.1 Hs.528305 8

receptor activity

endoplasmic reticulum

protein retention in ER lumen

protein transport

membrane

integral to membrane

vesicle-mediated transport

ER retention sequence binding

Vibrio cholerae infection

226084_at 0.383 5.443 2.344 3.307e-02 0.273 -3.803 MAP1B microtubule-associated protein 1B 5 71438873 AA554833 5q13 Hs.335079 34

microtubule bundle formation

actin binding

structural molecule activity

protein binding

cytosol

microtubule

microtubule associated complex

negative regulation of microtubule depolymerization

dendrite development

 
219639_x_at -0.227 7.633 -2.344 3.308e-02 0.273 -3.803 PARP6 poly (ADP-ribose) polymerase family, member 6 15 -70320575 NM_020213 15q23 Hs.270244 5

NAD+ ADP-ribosyltransferase activity

nucleus

transferase activity, transferring glycosyl groups

 
219846_at -0.206 4.459 -2.344 3.308e-02 0.273 -3.803 GON4L gon-4-like (C. elegans) 1 -154001199, -153986133 NM_025174 1q22 Hs.656361 11

DNA binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

 
224645_at -0.283 7.017 -2.343 3.308e-02 0.273 -3.803 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 10 71833866 BG106477 10q21-q22 Hs.621200 Hs.695953 Hs.705686 22

protein binding

eukaryotic initiation factor 4E binding

insulin receptor signaling pathway

cAMP-mediated signaling

negative regulation of translational initiation

 
222924_at -0.525 7.669 -2.343 3.309e-02 0.273 -3.804 SLMAP sarcolemma associated protein 3 57718213 BF526855 3p21.2-p14.3 Hs.476432 11

smooth endoplasmic reticulum

plasma membrane

integral to plasma membrane

protein folding

muscle contraction

prefoldin complex

unfolded protein binding

 
213315_x_at 0.292 8.002 2.343 3.312e-02 0.273 -3.804 CXorf40A chromosome X open reading frame 40A X 148430462 L43577 Xq28 Hs.534641 11

protein binding

 
207573_x_at 0.225 11.545 2.343 3.314e-02 0.273 -3.805 ATP5L ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G 11 117777313 NM_006476 11q23.3 Hs.486360 15

mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)

protein binding

mitochondrion

ion transport

hydrogen ion transmembrane transporter activity

ATP synthesis coupled proton transport

proton transport

membrane

ATPase activity

Oxidative phosphorylation

Metabolic pathways

226625_at 0.336 7.341 2.343 3.314e-02 0.273 -3.805 TGFBR3 transforming growth factor, beta receptor III 1 -91918489 AW193698 1p33-p32 Hs.482390 60

liver development

type II transforming growth factor beta receptor binding

extracellular region

extracellular space

plasma membrane

integral to plasma membrane

immune response

transforming growth factor beta receptor signaling pathway

transforming growth factor beta receptor signaling pathway

protein kinase cascade

heparin binding

external side of plasma membrane

coreceptor activity

cell growth

cell migration

PDZ domain binding

BMP signaling pathway

response to follicle-stimulating hormone stimulus

inhibin-betaglycan-ActRII complex

response to prostaglandin E stimulus

response to luteinizing hormone stimulus

intracellular membrane-bounded organelle

SMAD binding

transforming growth factor beta binding

negative regulation of epithelial cell proliferation

negative regulation of cell motion

ventricular cardiac muscle morphogenesis

palate development

cardiac muscle cell proliferation

cardiac epithelial to mesenchymal transition

definitive erythrocyte differentiation

heart trabecula formation

pathway-restricted SMAD protein phosphorylation

transforming growth factor beta receptor activity, type III

 
219377_at -0.298 6.182 -2.342 3.317e-02 0.273 -3.806 FAM59A family with sequence similarity 59, member A 18 -28101474 NM_022751 18q12.1 Hs.444314 7    
211503_s_at -0.259 8.042 -2.342 3.318e-02 0.273 -3.806 RAB14 RAB14, member RAS oncogene family 9 -122980236 AF112206 9q32-q34.11 Hs.371563 Hs.713585 19

nucleotide binding

GTPase activity

protein binding

GTP binding

intracellular

membrane fraction

lysosome

early endosome

late endosome

rough endoplasmic reticulum

Golgi stack

cytosol

plasma membrane

Golgi to endosome transport

small GTPase mediated signal transduction

neurotransmitter secretion

protein transport

vesicle-mediated transport

trans-Golgi network transport vesicle

nuclear envelope-endoplasmic reticulum network

intracellular transport

perinuclear region of cytoplasm

 
232256_s_at 0.214 2.942 2.342 3.318e-02 0.273 -3.806 LOC401321 hypothetical LOC401321 7   AF143329 7p14.3 Hs.627604 1    
1556555_at 0.223 4.907 2.342 3.318e-02 0.273 -3.806 LOC100129461 hypothetical protein LOC100129461 6   AI473891 6p25.1 Hs.131700      
1554483_at 0.244 6.345 2.341 3.321e-02 0.273 -3.807 TMEM37 transmembrane protein 37 2 119905915 AF361356 2q14.2 Hs.26216 3

voltage-gated ion channel activity

calcium channel activity

calcium ion binding

ion transport

calcium ion transport

membrane

integral to membrane

 
214673_s_at 0.207 5.463 2.341 3.322e-02 0.273 -3.807 HUWE1 HECT, UBA and WWE domain containing 1 X -53575796 AU140931 Xp11.22 Hs.136905 28

protein polyubiquitination

DNA binding

ubiquitin-protein ligase activity

protein binding

intracellular

nucleus

nucleolus

cytoplasm

protein modification process

histone ubiquitination

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

cell differentiation

Ubiquitin mediated proteolysis

205763_s_at -0.366 6.085 -2.341 3.325e-02 0.273 -3.808 DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 2 118288724 NM_006773 2q14.1 Hs.363492 6

nucleotide binding

RNA binding

ATP-dependent RNA helicase activity

helicase activity

ATP binding

hydrolase activity

 
58367_s_at 0.248 7.174 2.341 3.325e-02 0.273 -3.808 ZNF419 zinc finger protein 419 19 62690890 AA429615 19q13.43 Hs.710285 6

DNA binding

intracellular

nucleus

cytoplasm

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1554708_s_at 0.236 4.109 2.341 3.325e-02 0.273 -3.808 C9orf68 chromosome 9 open reading frame 68 9 -4588315 BC034293 9p24.2-p24.1 Hs.179615 5    
208395_s_at 0.196 5.422 2.341 3.326e-02 0.273 -3.808 URB1 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) 21 -32605200 NM_014825 21q22.11 Hs.473611 9

molecular_function

protein binding

nucleus

nucleolus

biological_process

 
203565_s_at -0.283 7.850 -2.341 3.326e-02 0.273 -3.808 MNAT1 menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis) 14 60271222 NM_002431 14q23 Hs.509523 66

regulation of cyclin-dependent protein kinase activity

nucleotide-excision repair, DNA damage removal

nucleus

nucleoplasm

cytoplasm

DNA repair

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

protein complex assembly

apoptosis

cell cycle

adult heart development

zinc ion binding

cell proliferation

ventricular system development

multicellular organismal metabolic process

positive regulation of transcription from RNA polymerase II promoter

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

protein N-terminus binding

regulation of catalytic activity

response to calcium ion

Nucleotide excision repair

228570_at 0.338 4.354 2.341 3.327e-02 0.273 -3.808 BTBD11 BTB (POZ) domain containing 11 12 106236326, 106498763 BF510581 12q23.3 Hs.271272 2

DNA binding

protein binding

membrane

integral to membrane

 
205786_s_at 0.550 4.842 2.341 3.327e-02 0.273 -3.808 ITGAM integrin, alpha M (complement component 3 receptor 3 subunit) 16 31178788, 31178788 NM_000632 16p11.2 Hs.172631 145

magnesium ion binding

glycoprotein binding

receptor activity

calcium ion binding

cell adhesion

integrin-mediated signaling pathway

integrin complex

membrane

integral to membrane

protein heterodimerization activity

Cell adhesion molecules (CAMs)

Hematopoietic cell lineage

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

222874_s_at 0.357 5.607 2.340 3.328e-02 0.273 -3.809 CLN8 ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation) 8 1699276 AF123757 8p23 Hs.127675 15

age-dependent response to oxidative stress

endoplasmic reticulum

ER-Golgi intermediate compartment

phospholipid metabolic process

lipid transport

mitochondrial membrane organization

lysosome organization

nervous system development

adult walking behavior

cholesterol metabolic process

associative learning

regulation of cell size

lipid biosynthetic process

membrane

integral to membrane

spinal cord motor neuron differentiation

social behavior

negative regulation of apoptosis

cellular protein catabolic process

cellular macromolecule catabolic process

photoreceptor cell maintenance

negative regulation of proteolysis

ceramide biosynthetic process

musculoskeletal movement

neuromuscular process controlling posture

neuromuscular process controlling balance

negative regulation of transferase activity

glutamate uptake during transmission of nerve impulse

retina development in camera-type eye

neurofilament cytoskeleton organization

 
204344_s_at -0.470 6.373 -2.340 3.328e-02 0.273 -3.809 SEC23A Sec23 homolog A (S. cerevisiae) 14 -38570873 NM_006364 14q21.1 Hs.272927 18

Golgi membrane

protein binding

endoplasmic reticulum

Golgi apparatus

cytosol

intracellular protein transport

ER to Golgi vesicle-mediated transport

ER to Golgi vesicle-mediated transport

zinc ion binding

membrane

membrane organization

vesicle-mediated transport

COPII vesicle coat

perinuclear region of cytoplasm

 
203657_s_at -0.320 7.547 -2.340 3.329e-02 0.273 -3.809 CTSF cathepsin F 11 -66087510 NM_003793 11q13 Hs.11590 12

cysteine-type endopeptidase activity

lysosome

proteolysis

peptidase activity

Lysosome

218525_s_at -0.239 7.043 -2.340 3.330e-02 0.273 -3.809 HIF1AN hypoxia inducible factor 1, alpha subunit inhibitor 10 102285630 NM_017902 10q24 Hs.500788 30

peptide-aspartate beta-dioxygenase activity

iron ion binding

protein binding

nucleus

oxidoreductase activity

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

regulation of transcription

metal ion binding

oxidation reduction

 
1552946_at 0.227 3.408 2.340 3.330e-02 0.273 -3.809 ZNF114 zinc finger protein 114 19 53466465 NM_153608 19q13.33 Hs.511883 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
229100_s_at -0.174 6.465 -2.340 3.331e-02 0.273 -3.809 TIMM22 translocase of inner mitochondrial membrane 22 homolog (yeast) 17 847106 H87708 17p13 Hs.719296 8

protein binding

mitochondrion

mitochondrial inner membrane

protein transporter activity

protein transport

membrane

integral to membrane

intracellular protein transmembrane transport

 
222541_at -0.280 5.479 -2.340 3.332e-02 0.273 -3.810 RSF1 remodeling and spacing factor 1 11 -77054921 AA173588 11q14.1 Hs.420229 19

nucleus

nucleosome assembly

chromatin remodeling

transcription initiation

zinc ion binding

transcription activator activity

transcription repressor activity

nucleosome positioning

ATPase activity

RSF complex

histone binding

negative regulation of DNA binding

regulation of transcription

negative regulation of transcription, DNA-dependent

metal ion binding

positive regulation of viral transcription

 
221482_s_at -0.343 11.038 -2.340 3.332e-02 0.273 -3.810 ARPP19 cAMP-regulated phosphoprotein, 19kDa 15 -50626723 BC003418 15q21.2 Hs.512908 10

receptor binding

cytoplasm

potassium channel regulator activity

positive regulation of gluconeogenesis

positive regulation of glucose import

 
208159_x_at 0.415 6.452 2.340 3.333e-02 0.273 -3.810 DDX11 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae) 12 31118045 NM_004399 12p11 Hs.443960 13

mitotic sister chromatid segregation

S phase of mitotic cell cycle

G2/M transition of mitotic cell cycle

nucleotide binding

DNA binding

RNA binding

ATP-dependent DNA helicase activity

ATP binding

nucleus

nucleolus

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

cell cycle

positive regulation of cell proliferation

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

 
202085_at -0.414 6.619 -2.339 3.336e-02 0.274 -3.811 TJP2 tight junction protein 2 (zona occludens 2) 9 70978908 NM_004817 9q13-q21 Hs.50382 49

guanylate kinase activity

protein binding

nucleus

cytoplasm

plasma membrane

adherens junction

tight junction

cell junction

Tight junction

Vibrio cholerae infection

223280_x_at 0.355 5.958 2.339 3.337e-02 0.274 -3.811 MS4A6A membrane-spanning 4-domains, subfamily A, member 6A 11 -59696546, -59695655 AF253977 11q12.1 Hs.523702 5

receptor activity

signal transduction

membrane

integral to membrane

 
204232_at 0.410 5.783 2.339 3.338e-02 0.274 -3.811 FCER1G Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide 1 159451710 NM_004106 1q23 Hs.433300 29

positive regulation of type IIa hypersensitivity

positive regulation of type III hypersensitivity

positive regulation of type I hypersensitivity

Fc receptor mediated stimulatory signaling pathway

transmembrane receptor activity

protein binding

plasma membrane

plasma membrane

integral to plasma membrane

phagocytosis, engulfment

cell surface receptor linked signal transduction

external side of plasma membrane

immunoglobulin mediated immune response

IgE receptor activity

IgG binding

antigen processing and presentation of exogenous peptide antigen via MHC class II

neutrophil chemotaxis

positive regulation of interleukin-10 production

positive regulation of interleukin-6 production

positive regulation of tumor necrosis factor production

positive regulation of mast cell cytokine production

Fc-epsilon receptor I complex

negative regulation of mast cell apoptosis

antigen processing and presentation of exogenous peptide antigen via MHC class I

defense response to bacterium

positive regulation of mast cell degranulation

mast cell activation

positive regulation of phagocytosis

positive regulation of immune response

Natural killer cell mediated cytotoxicity

Fc epsilon RI signaling pathway

Asthma

217776_at 0.245 7.278 2.339 3.339e-02 0.274 -3.812 RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis) 14 -67213270 AF167438 14q24.1 Hs.226007 14

retinol dehydrogenase activity

binding

intracellular

endoplasmic reticulum

membrane

integral to membrane

oxidoreductase activity

retinol metabolic process

oxidation reduction

Retinol metabolism

Metabolic pathways

202227_s_at -0.345 7.852 -2.339 3.339e-02 0.274 -3.812 BRD8 bromodomain containing 8 5 -137520471, -137503357 NM_006696 5q31 Hs.519337 19

transcription factor activity

thyroid hormone receptor activity

nucleus

nucleolus

mitochondrion

regulation of transcription from RNA polymerase II promoter

cell surface receptor linked signal transduction

chromatin modification

NuA4 histone acetyltransferase complex

regulation of growth

histone H4 acetylation

histone H2A acetylation

 
214785_at -0.564 5.380 -2.339 3.341e-02 0.274 -3.812 VPS13A vacuolar protein sorting 13 homolog A (S. cerevisiae) 9 78982180, 78982180, 78982180 AB023203 9q21 Hs.459790 Hs.662256 16

protein binding

intracellular

Golgi to endosome transport

protein localization

protein transport

 
222357_at -0.433 6.839 -2.338 3.344e-02 0.274 -3.813 ZBTB20 zinc finger and BTB domain containing 20 3 -115540212 AW974823 3q13.2 Hs.655108 13

DNA binding

protein binding

intracellular

nucleus

nucleolus

zinc ion binding

regulation of transcription

metal ion binding

 
212902_at -0.267 3.734 -2.338 3.347e-02 0.274 -3.814 SEC24A SEC24 family, member A (S. cerevisiae) 5 134012377 BE645231 5q31.1 Hs.595540 9

Golgi membrane

molecular_function

protein binding

cytoplasm

endoplasmic reticulum

endoplasmic reticulum membrane

Golgi apparatus

intracellular protein transport

ER to Golgi vesicle-mediated transport

ER to Golgi vesicle-mediated transport

zinc ion binding

membrane

membrane organization

vesicle-mediated transport

COPII vesicle coat

perinuclear region of cytoplasm

 
229023_at 0.252 4.085 2.337 3.350e-02 0.274 -3.815 SFT2D3 SFT2 domain containing 3 2 128175066 BF590323 2q14.3 Hs.345849 Hs.700855 4

protein transport

membrane

integral to membrane

 
212587_s_at 0.415 4.670 2.337 3.350e-02 0.274 -3.815 PTPRC protein tyrosine phosphatase, receptor type, C 1 196874759, 196874759 AI809341 1q31-q32 Hs.654514 174

negative regulation of T cell mediated cytotoxicity

negative regulation of cytokine-mediated signaling pathway

immunoglobulin biosynthetic process

transmembrane receptor protein tyrosine phosphatase activity

protein binding

plasma membrane

integral to plasma membrane

focal adhesion

negative regulation of protein kinase activity

negative regulation of protein kinase activity

protein amino acid dephosphorylation

cell surface receptor linked signal transduction

hydrolase activity

protein kinase binding

T cell differentiation

positive regulation of B cell proliferation

regulation of S phase

positive regulation of T cell proliferation

positive regulation of protein kinase activity

T cell receptor signaling pathway

B cell receptor signaling pathway

positive regulation of antigen receptor-mediated signaling pathway

release of sequestered calcium ion into cytosol

defense response to virus

regulation of cell cycle

Cell adhesion molecules (CAMs)

T cell receptor signaling pathway

Fc gamma R-mediated phagocytosis

Primary immunodeficiency

215283_at -0.306 6.831 -2.336 3.355e-02 0.275 -3.816 LOC339290 hypothetical LOC339290 18 5228098 U79248 18p11.31 Hs.643553 Hs.700799 4    
207685_at 0.207 5.628 2.336 3.357e-02 0.275 -3.816 CRYBB3 crystallin, beta B3 22 23925824 NM_004076 22q11.2-q12.1 22q11.23 Hs.533022 12

structural constituent of eye lens

protein binding

visual perception

 
242070_at 0.205 3.143 2.336 3.358e-02 0.275 -3.817 LOC728485 hypothetical protein LOC728485 19   AI014470 19q13.12 Hs.157101 2    
202894_at 0.244 6.121 2.336 3.358e-02 0.275 -3.817 EPHB4 EPH receptor B4 7 -100238122 NM_004444 7q22 Hs.437008 54

nucleotide binding

receptor activity

ephrin receptor activity

ATP binding

integral to plasma membrane

protein amino acid phosphorylation

transmembrane receptor protein tyrosine kinase signaling pathway

cell proliferation

organ morphogenesis

cell surface

membrane

transferase activity

regulation of angiogenesis

Axon guidance

201376_s_at -0.235 6.523 -2.336 3.359e-02 0.275 -3.817 HNRNPF heterogeneous nuclear ribonucleoprotein F 10 -43201070, -43201070, -43201070, -43201070, -43201070, -43201070 AI591354 10q11.21-q11.22 Hs.712955 Hs.808 30

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

nucleoplasm

spliceosomal complex

nucleolus

cytoplasm

heterogeneous nuclear ribonucleoprotein complex

regulation of RNA splicing

 
219069_at -0.380 6.249 -2.336 3.359e-02 0.275 -3.817 ANKRD49 ankyrin repeat domain 49 11 93866800 NM_017704 11q21 Hs.29052 5    
237646_x_at 0.293 5.636 2.335 3.361e-02 0.275 -3.817 PLEKHG5 pleckstrin homology domain containing, family G (with RhoGef domain) member 5 1 -6448738, -6448738, -6448738, -6448738, -6448738 H83855 1p36.31 Hs.284232 Hs.619982 7

signal transducer activity

Rho guanyl-nucleotide exchange factor activity

intracellular

cytoplasm

cell death

regulation of Rho protein signal transduction

positive regulation of I-kappaB kinase/NF-kappaB cascade

perinuclear region of cytoplasm

 
226509_at -0.466 6.918 -2.335 3.361e-02 0.275 -3.817 ZNF641 zinc finger protein 641 12 -47022178 AV700302 12q13.11 Hs.23492 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
202869_at 0.373 5.510 2.335 3.362e-02 0.275 -3.818 OAS1 2',5'-oligoadenylate synthetase 1, 40/46kDa 12 111829121, 111829121 NM_016816 12q24.1 Hs.524760 44

nucleotide binding

RNA binding

ATP binding

nucleus

cytoplasm

mitochondrion

endoplasmic reticulum

microsome

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

immune response

transferase activity

nucleotidyltransferase activity

 
228720_at 0.197 5.228 2.335 3.362e-02 0.275 -3.818 SORCS2 sortilin-related VPS10 domain containing receptor 2 4 7245274 AB037750 4p16.1 Hs.479099 6

protein binding

neuropeptide signaling pathway

neuropeptide receptor activity

membrane

integral to membrane

 
237635_at 0.195 4.337 2.335 3.363e-02 0.275 -3.818 LOC100128164 four and a half LIM domains 1 pseudogene 3 -171154709, -171144467 AI075162 3q26.2 Hs.633070 Hs.716524 1    
226752_at -0.294 8.660 -2.335 3.366e-02 0.275 -3.819 FAM174A family with sequence similarity 174, member A 5 99899022 AI816071 5q21.1 Hs.716557 3

membrane

integral to membrane

 
228847_at 0.420 5.229 2.334 3.368e-02 0.275 -3.819 EXOC3 exocyst complex component 3 5 496333 W69265 5p15.33 Hs.481464 15

exocytosis

protein transport

Tight junction

228855_at 0.319 6.491 2.334 3.369e-02 0.275 -3.820 NUDT7 nudix (nucleoside diphosphate linked moiety X)-type motif 7 16 76313911, 76313911 AI927964 16q23.1 Hs.719356 2

magnesium ion binding

peroxisome

nucleoside diphosphate metabolic process

hydrolase activity

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

manganese ion binding

 
218984_at -0.288 6.570 -2.334 3.372e-02 0.275 -3.820 PUS7 pseudouridylate synthase 7 homolog (S. cerevisiae) 7 -104884195 NM_019042 7q22.3 Hs.520619 5

pseudouridine synthesis

RNA binding

tRNA processing

pseudouridine synthase activity

isomerase activity

 
1558356_at -0.571 4.756 -2.334 3.373e-02 0.275 -3.821 UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 15 -68733946, -68733946 AW081879 15q22-q24 Hs.108049 12

molecular_function

protein binding

extracellular region

membrane fraction

soluble fraction

nucleus

nuclear envelope

cytoplasm

cytosol

cytoskeleton

DNA damage response, signal transduction resulting in induction of apoptosis

induction of apoptosis by oxidative stress

response to UV

viral reproduction

positive regulation of protein import into nucleus

negative regulation of NF-kappaB import into nucleus

positive regulation of apoptosis

positive regulation of caspase activity

apoptosome

perinuclear region of cytoplasm

negative regulation of inflammatory response

 
203362_s_at -0.372 4.300 -2.333 3.374e-02 0.275 -3.821 MAD2L1 MAD2 mitotic arrest deficient-like 1 (yeast) 4 -121200024 NM_002358 4q27 Hs.591697 92

condensed chromosome kinetochore

protein binding

nucleus

nuclear pore

cytoplasm

cytosol

cytosol

cell cycle

mitosis

mitotic cell cycle checkpoint

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

protein homodimerization activity

perinuclear region of cytoplasm

cell division

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

212236_x_at 0.212 6.113 2.333 3.375e-02 0.275 -3.821 KRT17 keratin 17 17 -37029217 Z19574 17q12-q21 Hs.2785 39

structural constituent of cytoskeleton

protein binding

nucleus

nucleolus

cytoplasm

cytoskeleton

intermediate filament

epidermis development

 
1560396_at 0.283 3.412 2.333 3.377e-02 0.275 -3.821 KLHL6 kelch-like 6 (Drosophila) 3 -184688012 AK097976   Hs.659147 6

protein binding

 
212195_at -0.254 9.126 -2.333 3.377e-02 0.275 -3.821 IL6ST interleukin 6 signal transducer (gp130, oncostatin M receptor) 5 -55272450 AL049265 5q11 Hs.532082 124

positive regulation of acute inflammatory response

positive regulation of adaptive immune response

receptor activity

ciliary neurotrophic factor receptor activity

interleukin-6 receptor activity

interleukin-6 receptor activity

interleukin-11 receptor activity

leukemia inhibitory factor receptor activity

oncostatin-M receptor activity

receptor binding

ciliary neurotrophic factor receptor binding

extracellular region

plasma membrane

interleukin-6 receptor complex

oncostatin-M receptor complex

glycogen metabolic process

signal transduction

positive regulation of cell proliferation

regulation of Notch signaling pathway

external side of plasma membrane

positive regulation vascular endothelial growth factor production

positive regulation of cardiac muscle hypertrophy

integral to membrane

response to cytokine stimulus

positive regulation of T cell proliferation

positive regulation of tyrosine phosphorylation of Stat1 protein

positive regulation of tyrosine phosphorylation of Stat3 protein

protein homodimerization activity

interleukin-27 receptor activity

positive regulation of osteoblast differentiation

positive regulation of anti-apoptosis

leukemia inhibitory factor signaling pathway

interleukin-27-mediated signaling pathway

ciliary neurotrophic factor receptor complex

ciliary neurotrophic factor-mediated signaling pathway

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

204122_at 0.495 5.647 2.333 3.378e-02 0.275 -3.822 TYROBP TYRO protein tyrosine kinase binding protein 19 -41087142 NM_003332 19q13.1 Hs.515369 39

receptor signaling protein activity

protein binding

integral to plasma membrane

cellular defense response

intracellular signaling cascade

membrane

Natural killer cell mediated cytotoxicity

1564112_at 0.185 6.060 2.333 3.378e-02 0.275 -3.822 FAM71A family with sequence similarity 71, member A 1 210864438 AK097437 1q32.3 Hs.129293 4    
211666_x_at 0.649 9.491 2.333 3.379e-02 0.275 -3.822 RPL3 ribosomal protein L3 22 -38038832 L22453 22q13 Hs.119598 24

RNA binding

structural constituent of ribosome

protein binding

intracellular

nucleolus

cytoplasm

cytosol

ribosome

translational elongation

cytosolic large ribosomal subunit

Ribosome

1560201_at 0.214 2.807 2.333 3.379e-02 0.275 -3.822 ZNF713 zinc finger protein 713 7 55947824 AK097282 7p11.2 Hs.660834 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
230774_at -0.450 5.504 -2.333 3.380e-02 0.275 -3.822 PTGR2 prostaglandin reductase 2 14 73388286, 73388299, 73388373 BE465894 14q24.3 Hs.632344 9

binding

nucleus

nucleolus

cytoplasm

zinc ion binding

oxidoreductase activity

15-oxoprostaglandin 13-oxidase activity

oxidation reduction

 
231895_at -0.291 3.996 -2.332 3.381e-02 0.275 -3.823 SASS6 spindle assembly 6 homolog (C. elegans) 1 -100321689 AA501453 1p21.2 Hs.591447 7

centrosome

centrosome

cell cycle

centrosome duplication

 
217961_at -0.342 7.709 -2.332 3.382e-02 0.275 -3.823 SLC25A38 solute carrier family 25, member 38 3 39399818 NM_017875 3p22.1 Hs.369615 7

binding

mitochondrion

mitochondrial inner membrane

heme biosynthetic process

transport

membrane

integral to membrane

erythrocyte differentiation

 
224177_s_at -0.293 6.290 -2.332 3.384e-02 0.276 -3.823 CXorf26 chromosome X open reading frame 26 X 75309172 AF151079 Xq13.3 Hs.370100 6

molecular_function

cellular_component

biological_process

 
222837_s_at -0.658 4.893 -2.332 3.385e-02 0.276 -3.824 NARG1 NMDA receptor regulated 1 4 140442125 AF327722 4q31.1 Hs.715706 17

angiogenesis

protein binding

nucleus

transcription factor complex

cytoplasm

N-terminal protein amino acid acetylation

multicellular organismal development

N-acetyltransferase activity

cell differentiation

ribosome binding

regulation of transcription

positive regulation of transcription, DNA-dependent

 
207004_at 0.304 6.470 2.331 3.390e-02 0.276 -3.825 BCL2 B-cell CLL/lymphoma 2 18 -59136166, -58941558 NM_000657 18q21.3 18q21.33 Hs.150749 705

G1/S transition of mitotic cell cycle

protein phosphatase type 2A complex

cell morphogenesis

response to acid

ovarian follicle development

ureteric bud development

branching involved in ureteric bud morphogenesis

behavioral fear response

response to hypoxia

B cell homeostasis

release of cytochrome c from mitochondria

regulation of cell-matrix adhesion

protease binding

lymphoid progenitor cell differentiation

B cell lineage commitment

T cell lineage commitment

immune system development

renal system process

intracellular

membrane fraction

nucleus

cytoplasm

mitochondrion

mitochondrial outer membrane

mitochondrial outer membrane

mitochondrial outer membrane

endoplasmic reticulum

endoplasmic reticulum membrane

microsome

cytosol

calcineurin complex

protein amino acid dephosphorylation

melanin metabolic process

oxygen and reactive oxygen species metabolic process

regulation of nitrogen utilization

anti-apoptosis

humoral immune response

response to oxidative stress

actin filament organization

female pregnancy

cell aging

response to nutrient

transcription factor binding

cell death

positive regulation of cell proliferation

male gonad development

activation of pro-apoptotic gene products

response to radiation

response to heat

response to external stimulus

response to toxin

post-embryonic development

organ morphogenesis

response to inorganic substance

response to iron ion

response to UV-B

response to gamma radiation

regulation of gene expression

negative regulation of calcium ion transport into cytosol

regulation of glycoprotein biosynthetic process

mesenchymal cell development

positive regulation of neuron maturation

positive regulation of smooth muscle cell migration

membrane

integral to membrane

cell-cell adhesion

transcription activator activity

peptidyl-threonine phosphorylation

cochlear nucleus development

gland morphogenesis

hemopoiesis

negative regulation of ossification

negative regulation of cell growth

negative regulation of cell migration

response to caffeine

hair follicle morphogenesis

axon regeneration

regulation of protein stability

nuclear membrane

endoplasmic reticulum calcium ion homeostasis

glomerulus development

negative regulation of cellular pH reduction

regulation of protein localization

negative regulation of myeloid cell apoptosis

T cell differentiation in the thymus

positive regulation of peptidyl-serine phosphorylation

negative regulation of osteoblast proliferation

response to cytokine stimulus

response to nicotine

organ growth

positive regulation of multicellular organism growth

B cell proliferation

response to drug

response to hydrogen peroxide

protein homodimerization activity

T cell homeostasis

positive regulation of catalytic activity

myelin sheath

CD8-positive, alpha-beta T cell lineage commitment

response to peptide hormone stimulus

regulation of protein homodimerization activity

regulation of protein heterodimerization activity

negative regulation of neuron apoptosis

ear development

response to estrogen stimulus

regulation of viral genome replication

response to ethanol

positive regulation of melanocyte differentiation

negative regulation of mitotic cell cycle

negative regulation of retinal cell programmed cell death

regulation of mitochondrial membrane permeability

protein heterodimerization activity

focal adhesion formation

positive regulation of pigmentation during development

spleen development

thymus development

gut morphogenesis

developmental growth

oocyte development

positive regulation of skeletal muscle fiber development

pigment granule organization

homeostasis of number of cells within a tissue

response to glucocorticoid stimulus

BH3 domain binding

defense response to virus

regulation of cell cycle

response to protein stimulus

regulation of mitochondrial membrane potential

negative regulation of mitochondrial depolarization

regulation of calcium ion transport

apoptosis in response to endoplasmic reticulum stress

Apoptosis

Focal adhesion

Neurotrophin signaling pathway

Amyotrophic lateral sclerosis (ALS)

Pathways in cancer

Colorectal cancer

Prostate cancer

Small cell lung cancer

220816_at 0.243 5.461 2.331 3.393e-02 0.276 -3.826 LPAR3 lysophosphatidic acid receptor 3 1 -85051673 NM_012152 1p22.3 Hs.674915 19

activation of MAPK activity

lysosphingolipid and lysophosphatidic acid receptor activity

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein signaling, coupled to cyclic nucleotide second messenger

elevation of cytosolic calcium ion concentration

synaptic transmission

lipid binding

bleb formation

positive regulation of MAPKKK cascade

Neuroactive ligand-receptor interaction

220510_at 0.227 6.815 2.331 3.393e-02 0.276 -3.826 RHBG Rh family, B glycoprotein (gene/pseudogene) 1 154605626 NM_020407 1q21.3 Hs.131835 16

plasma membrane

integral to plasma membrane

transport

ammonium transmembrane transporter activity

spectrin-associated cytoskeleton

basolateral plasma membrane

basolateral plasma membrane

ankyrin binding

cytoplasmic vesicle

anchored to plasma membrane

ammonia transporter activity

ammonia transporter activity

transepithelial ammonium transport

 
226804_at 0.269 4.386 2.330 3.394e-02 0.276 -3.826 FAM20A family with sequence similarity 20, member A 17 -64042852, -64042852 AI632223 17q24.2 Hs.268874 5

extracellular region

 
214047_s_at -0.348 7.459 -2.330 3.395e-02 0.276 -3.826 MBD4 methyl-CpG binding domain protein 4 3 -130632482 AI913365 3q21-q22 Hs.35947 34

DNA binding

satellite DNA binding

endodeoxyribonuclease activity

protein binding

nucleus

nucleolus

base-excision repair

response to DNA damage stimulus

hydrolase activity

depyrimidination

Base excision repair

226014_at -0.321 4.683 -2.330 3.399e-02 0.276 -3.827 EIF3F eukaryotic translation initiation factor 3, subunit F 11 7965442 BF115977 11p15.4 Hs.516023 26

translation initiation factor activity

translation initiation factor activity

translation initiation factor activity

protein binding

cytoplasm

cytosol

eukaryotic translation initiation factor 3 complex

eukaryotic translation initiation factor 3 complex

translational initiation

translational initiation

 
242429_at 0.305 3.550 2.330 3.399e-02 0.276 -3.827 ZNF567 zinc finger protein 567 19 41872141 BF435183 19q13.12 Hs.412517 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
32209_at -0.341 9.088 -2.329 3.402e-02 0.276 -3.828 FAM89B family with sequence similarity 89, member B 11 65096395 AF052151 11q23 Hs.25723 7    
219594_at -0.784 6.774 -2.329 3.402e-02 0.276 -3.828 NINJ2 ninjurin 2 12 -543722 NM_016533 12p13 Hs.656450 5

protein binding

integral to plasma membrane

cell adhesion

neuron adhesion

nervous system development

membrane

tissue regeneration

 
211774_s_at 0.431 6.349 2.329 3.404e-02 0.277 -3.829 MMACHC methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria 1 45738442 BC006122 1p34.1 Hs.13024 11

cobalamin binding

cobalt ion binding

 
202366_at 0.258 7.698 2.329 3.404e-02 0.277 -3.829 ACADS acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain 12 119647953 NM_000017 12q22-qter Hs.507076 24

acyl-CoA binding

butyryl-CoA dehydrogenase activity

mitochondrion

mitochondrial matrix

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

electron carrier activity

response to starvation

FAD binding

response to glucocorticoid stimulus

oxidation reduction

Fatty acid metabolism

Valine, leucine and isoleucine degradation

Butanoate metabolism

Metabolic pathways

212115_at 0.183 6.959 2.329 3.406e-02 0.277 -3.829 HN1L hematological and neurological expressed 1-like 16 1668278 AK023154 16p13.3 Hs.513261 8

nucleus

cytoplasm

 
221817_at 0.189 6.267 2.329 3.406e-02 0.277 -3.829 DOLPP1 dolichyl pyrophosphate phosphatase 1 9 130883203 AI684664 9q34.1 Hs.21701 6

endoplasmic reticulum

protein amino acid N-linked glycosylation

membrane

integral to membrane

hydrolase activity

integral to endoplasmic reticulum membrane

dolichyldiphosphatase activity

N-Glycan biosynthesis

Biosynthesis of terpenoids and steroids

226841_at 0.397 4.907 2.328 3.407e-02 0.277 -3.829 MPEG1 macrophage expressed 1 11 -58732558 BF590697 11q12.1 Hs.718450 4

membrane

integral to membrane

 
225341_at 0.307 6.223 2.328 3.408e-02 0.277 -3.830 MTERFD3 MTERF domain containing 3 12 -105895198 BF697312 12q24.1 Hs.5009 6

mitochondrion

transcription termination

regulation of transcription

 
231251_at 0.278 3.737 2.328 3.409e-02 0.277 -3.830 WIPF2 WAS/WASL interacting protein family, member 2 17 35629099 AW295547 17q21.1-q21.2 Hs.421622 Hs.705989 11

actin binding

cytoplasm

cytoskeleton

 
1556730_at 0.195 2.964 2.328 3.410e-02 0.277 -3.830 LOC652993 hypothetical LOC652993 12   AK074510 12q21 Hs.585591 1    
200793_s_at 0.289 10.081 2.328 3.410e-02 0.277 -3.830 ACO2 aconitase 2, mitochondrial 22 40195074 NM_001098 22q11.2-q13.31 22q13.2 Hs.643610 Hs.712617 26

aconitate hydratase activity

aconitate hydratase activity

iron ion binding

nucleus

mitochondrion

mitochondrial matrix

generation of precursor metabolites and energy

tricarboxylic acid cycle

citrate metabolic process

metabolic process

lyase activity

metal ion binding

4 iron, 4 sulfur cluster binding

Citrate cycle (TCA cycle)

Glyoxylate and dicarboxylate metabolism

Reductive carboxylate cycle (CO2 fixation)

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

224929_at 0.186 5.418 2.328 3.411e-02 0.277 -3.831 TMEM173 transmembrane protein 173 5 -138835732 AA100891 5q31.2 Hs.379754 8

mitochondrion

mitochondrial outer membrane

endoplasmic reticulum

plasma membrane

apoptosis

integral to membrane

innate immune response

RIG-I-like receptor signaling pathway

204640_s_at -0.362 8.436 -2.328 3.413e-02 0.277 -3.831 SPOP speckle-type POZ protein 17 -45031244 NM_003563 17q21.33 Hs.463382 Hs.718421 27

protein binding

nucleus

mRNA processing

modification-dependent protein catabolic process

 
231034_s_at 0.274 4.452 2.328 3.413e-02 0.277 -3.831 NHSL1 NHS-like 1 6 -138784873, -138784873 AI871589 6q23.3 Hs.652741 3    
212474_at -0.338 5.909 -2.327 3.413e-02 0.277 -3.831 AVL9 AVL9 homolog (S. cerevisiase) 7 32501700 D87682 7p14.3 Hs.128056 5

membrane

integral to membrane

 
232702_at -0.303 6.294 -2.327 3.414e-02 0.277 -3.831 RABGAP1L RAB GTPase activating protein 1-like 1 172395256, 173111306 BG397461 1q24 Hs.585378 9

GTPase activator activity

Rab GTPase activator activity

intracellular

regulation of Rab GTPase activity

 
232160_s_at -0.295 6.866 -2.327 3.414e-02 0.277 -3.831 TNIP2 TNFAIP3 interacting protein 2 4 -2713184, -2713184 AL137262 4p16.3 Hs.719161 20

protein binding

cytoplasm

I-kappaB kinase/NF-kappaB cascade

 
226544_x_at -0.261 7.166 -2.327 3.415e-02 0.277 -3.831 MUTED muted homolog (mouse) 6 -7959213 AV734582 6p25.1-p24.3 Hs.719272 10

protein binding

 
230124_at 0.234 4.385 2.327 3.415e-02 0.277 -3.831 TMEM30B transmembrane protein 30B 14 -60813841 BE218611 14q23.1 Hs.146180 5

membrane

integral to membrane

 
1557155_a_at 0.411 4.720 2.327 3.416e-02 0.277 -3.832 FLJ30375 hypothetical protein LOC440982 3   AI367357 3q24 Hs.535724 1    
201229_s_at -0.432 7.929 -2.327 3.417e-02 0.277 -3.832 ARIH2 ariadne homolog 2 (Drosophila) 3 48931284 BC000422 3p21.2-p21.3 Hs.633601 14

nucleic acid binding

protein binding

nucleus

ubiquitin-dependent protein catabolic process

multicellular organismal development

zinc ion binding

metal ion binding

 
224378_x_at 0.243 7.995 2.327 3.417e-02 0.277 -3.832 MAP1LC3A microtubule-associated protein 1 light chain 3 alpha 20 32598352, 32610179 AF276658 20cen-q13 Hs.632273 29

autophagic vacuole formation

protein binding

cytoplasm

autophagic vacuole

cytosol

microtubule

autophagy

phosphatidylethanolamine binding

modification-dependent protein catabolic process

organelle membrane

cytoplasmic vesicle

 
235822_at 0.370 6.208 2.327 3.419e-02 0.277 -3.833 COQ9 coenzyme Q9 homolog (S. cerevisiae) 16 56038902 AW273049 16q21 Hs.513632 7

mitochondrion

ubiquinone biosynthetic process

 
1569973_at -1.091 5.374 -2.326 3.420e-02 0.277 -3.833 SEPT13 septin 13 7 -45729914 BC015774 7p12.3 Hs.520804 6

protein binding

GTP binding

cell cycle

septin complex

 
227479_at 0.185 6.909 2.326 3.423e-02 0.277 -3.834 KIAA1244 KIAA1244 6 138524916 AV712413 6q23.3 Hs.656215 5

ARF guanyl-nucleotide exchange factor activity

intracellular

membrane

integral to membrane

regulation of ARF protein signal transduction

 
215101_s_at 0.208 3.350 2.326 3.424e-02 0.277 -3.834 CXCL5 chemokine (C-X-C motif) ligand 5 4 -75080222 BG166705 4q12-q13 Hs.89714 49

extracellular region

extracellular space

chemotaxis

immune response

signal transduction

cell-cell signaling

chemokine activity

positive regulation of cell proliferation

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

218325_s_at 0.303 7.010 2.326 3.425e-02 0.277 -3.834 DIDO1 death inducer-obliterator 1 20 -61006799, -61006799, -60989013, -60979534 NM_022105 20q13.33 Hs.517172 18

protein binding

nucleus

cytoplasm

transcription

apoptosis

zinc ion binding

metal ion binding

 
219118_at 0.310 4.193 2.326 3.426e-02 0.277 -3.834 FKBP11 FK506 binding protein 11, 19 kDa 12 -47603175, -47602009, -47602009 NM_016594 12q13.12 Hs.655103 5

peptidyl-prolyl cis-trans isomerase activity

protein folding

membrane

integral to membrane

isomerase activity

 
227255_at -0.490 6.289 -2.325 3.427e-02 0.277 -3.835 PDIK1L PDLIM1 interacting kinase 1 like 1 26310242, 26310854 AI806633 1p36.11 Hs.468801 6

nucleotide binding

protein serine/threonine kinase activity

ATP binding

nucleus

protein amino acid phosphorylation

transferase activity

 
1554376_s_at 0.226 6.284 2.325 3.428e-02 0.277 -3.835 PTPLA protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A 10 -17671963 BC027709 10p14-p13 Hs.114062 6

multicellular organismal development

membrane

integral to membrane

 
225090_at -0.227 6.892 -2.325 3.428e-02 0.277 -3.835 SYVN1 synovial apoptosis inhibitor 1, synoviolin 11 -64651326 AA844682 11q13 Hs.715498 30

in utero embryonic development

protein binding

nucleus

nucleolus

endoplasmic reticulum

anti-apoptosis

response to stress

zinc ion binding

membrane

integral to membrane

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

ER-associated protein catabolic process

metal ion binding

Ubiquitin mediated proteolysis

223305_at 0.209 5.925 2.325 3.428e-02 0.277 -3.835 TMEM216 transmembrane protein 216 11 60916440 AF151078 11q13.1 Hs.26745 3

membrane

integral to membrane

 
236746_at 0.254 4.424 2.325 3.429e-02 0.277 -3.835 GALNT1 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) 18 31488530 AA513464 18q12.1 Hs.514806 26

polypeptide N-acetylgalactosaminyltransferase activity

calcium ion binding

sugar binding

extracellular region

Golgi apparatus

membrane

integral to membrane

transferase activity, transferring glycosyl groups

protein amino acid O-linked glycosylation via serine

protein amino acid O-linked glycosylation via threonine

manganese ion binding

perinuclear region of cytoplasm

O-Glycan biosynthesis

Metabolic pathways

203615_x_at 0.472 7.032 2.325 3.430e-02 0.277 -3.835 SULT1A1 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1 16 -28524418, -28524418, -28524416 NM_001055 16p12.1 Hs.567342 134

aryl sulfotransferase activity

cytoplasm

catecholamine metabolic process

lipid metabolic process

steroid metabolic process

amine metabolic process

transferase activity

Sulfur metabolism

37201_at -0.809 7.413 -2.325 3.432e-02 0.277 -3.836 ITIH4 inter-alpha (globulin) inhibitor H4 (plasma Kallikrein-sensitive glycoprotein) 3 -52822045 D38535 3p21-p14 Hs.709406 19

serine-type endopeptidase inhibitor activity

extracellular region

acute-phase response

hyaluronan metabolic process

 
210956_at 0.213 4.022 2.324 3.435e-02 0.277 -3.837 PPYR1 pancreatic polypeptide receptor 1 10 46503539 U42387 10q11.2 Hs.524719 14

peptide YY receptor activity

pancreatic polypeptide receptor activity

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

digestion

feeding behavior

blood circulation

Neuroactive ligand-receptor interaction

231973_s_at -0.495 4.745 -2.324 3.436e-02 0.277 -3.837 ANAPC1 anaphase promoting complex subunit 1 2 -112243110 AK001223 2q12.1 Hs.436527 26

nucleoplasm

cytosol

cell cycle

mitosis

modification-dependent protein catabolic process

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

cell division

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

Ubiquitin mediated proteolysis

222381_at 0.208 5.057 2.324 3.438e-02 0.277 -3.837 PDCD6 programmed cell death 6 5 324735 AI907083 5p15.33 Hs.50823 36

calcium ion binding

nucleus

endoplasmic reticulum

apoptosis

induction of apoptosis by extracellular signals

membrane

calcium-dependent protein binding

response to calcium ion

 
243594_x_at 0.269 4.901 2.324 3.438e-02 0.277 -3.837 SPIRE2 spire homolog 2 (Drosophila) 16 88422407 AA553722 16q24 Hs.461786 3

actin binding

cytoplasm

cytoskeleton

transport

zinc ion binding

Dorso-ventral axis formation

225927_at 0.261 6.647 2.324 3.439e-02 0.277 -3.838 MAP3K1 mitogen-activated protein kinase kinase kinase 1 5 56146656 AA541479 5q11.2 Hs.653654 80

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

ATP binding

cellular_component

cytosol

protein amino acid phosphorylation

transforming growth factor beta receptor signaling pathway

I-kappaB kinase/NF-kappaB cascade

activation of JUN kinase activity

zinc ion binding

JUN kinase kinase activity

apoptotic mitochondrial changes

transferase activity

regulation of cell migration

positive regulation of actin filament polymerization

wound healing

identical protein binding

camera-type eye development

MAPK signaling pathway

Ubiquitin mediated proteolysis

RIG-I-like receptor signaling pathway

Neurotrophin signaling pathway

GnRH signaling pathway

226322_at -0.395 8.258 -2.324 3.439e-02 0.277 -3.838 TMTC1 transmembrane and tetratricopeptide repeat containing 1 12 -29545023 BF109231 12p11.22 Hs.401954 3

binding

membrane

integral to membrane

 
240479_at 0.284 5.098 2.324 3.439e-02 0.277 -3.838 HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 6 -114483442 AW449310 6q21 Hs.645477 8

protein binding

Golgi apparatus

protein amino acid sulfation

sulfotransferase activity

[heparan sulfate]-glucosamine 3-sulfotransferase 1 activity

heparan sulfate proteoglycan biosynthetic process, enzymatic modification

membrane

integral to membrane

transferase activity

regulation of virion penetration into host cell

3'-phosphoadenosine 5'-phosphosulfate binding

negative regulation of coagulation

Heparan sulfate biosynthesis

204812_at -0.294 6.054 -2.323 3.441e-02 0.278 -3.838 ZW10 ZW10, kinetochore associated, homolog (Drosophila) 11 -113109118 NM_004724 11q23.2 Hs.503886 24

mitotic sister chromatid segregation

condensed chromosome kinetochore

spindle pole

protein binding

nucleus

cytoplasm

endoplasmic reticulum

kinetochore microtubule

protein complex assembly

ER to Golgi vesicle-mediated transport

cell cycle

mitotic cell cycle checkpoint

regulation of exit from mitosis

meiosis

protein transport

membrane

vesicle-mediated transport

centromeric DNA binding

cell division

 
205382_s_at 0.575 8.853 2.323 3.445e-02 0.278 -3.839 CFD complement factor D (adipsin) 19 810664 NM_001928 19p13.3 Hs.155597 17

serine-type endopeptidase activity

extracellular region

extracellular region

extracellular space

proteolysis

complement activation, alternative pathway

complement activation, alternative pathway

peptidase activity

platelet alpha granule lumen

Complement and coagulation cascades

231406_at 0.231 5.101 2.323 3.446e-02 0.278 -3.839 ORAI2 ORAI calcium release-activated calcium modulator 2 7 101861000 AW205664 7q22.1 Hs.363308 12

membrane

integral to membrane

 
226090_x_at -0.317 5.883 -2.322 3.447e-02 0.278 -3.840 RABL3 RAB, member of RAS oncogene family-like 3 3 -121888217 AK025772 3q13.33 Hs.444360 1

nucleotide binding

GTP binding

intracellular

small GTPase mediated signal transduction

 
217938_s_at -0.292 9.082 -2.322 3.451e-02 0.278 -3.841 KCMF1 potassium channel modulatory factor 1 2 85051741 NM_020122 2p11.2 Hs.654968 7

intracellular

zinc ion binding

ligase activity

modification-dependent protein catabolic process

metal ion binding

 
222455_s_at 0.389 4.858 2.322 3.452e-02 0.278 -3.841 PARVA parvin, alpha 11 12355721 AF237771 11p15.3 Hs.607144 17

actin binding

protein binding

nucleus

cytoplasm

cytoskeleton

plasma membrane

focal adhesion

cell adhesion

lamellipodium

cell junction

Focal adhesion

212645_x_at 0.249 7.898 2.321 3.454e-02 0.278 -3.842 BRE brain and reproductive organ-expressed (TNFRSF1A modulator) 2 27966985, 27967060 AL566299 2p23.2 Hs.258314 20

nuclear ubiquitin ligase complex

peroxisome targeting sequence binding

tumor necrosis factor receptor binding

protein binding

nucleus

cytoplasm

double-strand break repair

apoptosis

response to DNA damage stimulus

signal transduction

response to ionizing radiation

chromatin modification

G2/M transition DNA damage checkpoint

polyubiquitin binding

positive regulation of DNA repair

positive regulation of anti-apoptosis

BRCA1-A complex

BRISC complex

 
206768_at -0.515 11.342 -2.321 3.454e-02 0.278 -3.842 RPL3L ribosomal protein L3-like 16 -1934580 NM_005061 16p13.3 Hs.657266 7

RNA binding

structural constituent of ribosome

intracellular

cytosol

ribosome

translational elongation

Ribosome

217624_at -0.275 3.385 -2.321 3.455e-02 0.278 -3.842 PDAP1 PDGFA associated protein 1 7 -98830524 AA464753 7q22.1 Hs.632296 8

signal transduction

cell proliferation

 
220777_at -0.415 5.829 -2.321 3.456e-02 0.278 -3.842 KIF13A kinesin family member 13A 6 -17871902, -17868563 NM_022113 6p23 Hs.189915 14

nucleotide binding

microtubule motor activity

protein binding

ATP binding

microtubule

microtubule-based movement

protein transport

 
217848_s_at 0.293 10.520 2.321 3.456e-02 0.278 -3.842 PPA1 pyrophosphatase (inorganic) 1 10 -71632591 NM_021129 10q11.1-q24 Hs.437403 19

magnesium ion binding

inorganic diphosphatase activity

cytoplasm

cytosol

phosphate metabolic process

hydrolase activity

Oxidative phosphorylation

207983_s_at -0.363 6.437 -2.321 3.460e-02 0.278 -3.843 STAG2 stromal antigen 2 X 122922155, 122923236 NM_006603 Xq25 Hs.496710 Hs.624663 18

chromatin

protein binding

nucleus

cytoskeleton

cell cycle

chromosome segregation

mitosis

meiosis

biological_process

cell division

Cell cycle

240528_s_at -0.329 4.522 -2.321 3.460e-02 0.278 -3.843 EXOC4 exocyst complex component 4 7 132588362, 132588362 AI964022 7q31 Hs.321273 30

exocyst

cytoplasm

vesicle docking during exocytosis

protein transport

protein N-terminus binding

Tight junction

226387_at -0.341 5.581 -2.320 3.463e-02 0.278 -3.844 RSBN1L round spermatid basic protein 1-like 7 77163678 AI439157 7q11.23 Hs.592289 Hs.72451 4

nucleus

 
227942_s_at -0.338 7.313 -2.320 3.464e-02 0.278 -3.844 CRIPT cysteine-rich PDZ-binding protein 2 46697828 BF591360 2p21 Hs.133998 11

cytoplasm

cell junction

cell projection

dendritic spine

synapse

 
217894_at -0.472 5.910 -2.320 3.466e-02 0.278 -3.845 KCTD3 potassium channel tetramerisation domain containing 3 1 213807357 NM_016121 1q41 Hs.335139 6

voltage-gated potassium channel activity

protein binding

potassium ion transport

voltage-gated potassium channel complex

membrane

 
203845_at -0.445 8.394 -2.320 3.466e-02 0.278 -3.845 KAT2B K(lysine) acetyltransferase 2B 3 20056527 AV727449 3p24 Hs.533055 163

PCAF complex

transcription coactivator activity

histone acetyltransferase activity

nucleus

nucleoplasm

chromatin remodeling

regulation of transcription, DNA-dependent

cell cycle

cell cycle arrest

N-acetyltransferase activity

metabolic process

negative regulation of cell proliferation

histone acetylation

chromatin remodeling complex

transferase activity

N-terminal peptidyl-lysine acetylation

histone deacetylase binding

interspecies interaction between organisms

Notch signaling pathway

226219_at 0.277 3.556 2.320 3.467e-02 0.278 -3.845 ARHGAP30 Rho GTPase activating protein 30 1 -159283355 AW575123 1q23.3 Hs.389374 4

GTPase activator activity

intracellular

signal transduction

 
214875_x_at 0.184 6.580 2.319 3.469e-02 0.278 -3.845 APLP2 amyloid beta (A4) precursor-like protein 2 11 129444925 AW001847 11q23-q25 11q24 Hs.709184 43

DNA binding

serine-type endopeptidase inhibitor activity

nucleus

plasma membrane

G-protein coupled receptor protein signaling pathway

integral to membrane

peptidase inhibitor activity

identical protein binding

 
218182_s_at -0.231 4.107 -2.319 3.469e-02 0.278 -3.845 CLDN1 claudin 1 3 -191506186 NM_021101 3q28-q29 Hs.439060 63

structural molecule activity

plasma membrane

integral to plasma membrane

tight junction

cell adhesion

calcium-independent cell-cell adhesion

cell junction

identical protein binding

interspecies interaction between organisms

Cell adhesion molecules (CAMs)

Tight junction

Leukocyte transendothelial migration

Pathogenic Escherichia coli infection - EHEC

1558689_a_at 0.171 3.184 2.319 3.469e-02 0.278 -3.845 LOC441461 hypothetical LOC441461 9   BG701300 9q31.1 Hs.163155 1    
200058_s_at -0.275 8.360 -2.319 3.469e-02 0.278 -3.845 SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 2 -96303800 BC001417 2q11.2 Hs.246112 25

nucleotide binding

cis assembly of pre-catalytic spliceosome

nuclear mRNA splicing, via spliceosome

nucleic acid binding

helicase activity

protein binding

ATP binding

nucleus

spliceosomal complex

U5 snRNP

ATP-dependent helicase activity

RNA splicing

hydrolase activity

 
1556630_at -0.301 3.836 -2.319 3.471e-02 0.278 -3.846 CASC2 cancer susceptibility candidate 2 10 119796321, 119796321 AJ344228 10q26.11 Hs.89387 3    
241700_at -0.380 4.856 -2.319 3.471e-02 0.278 -3.846 ZFHX4 zinc finger homeobox 4 8 77756069 AW963185 8q21.11 Hs.458973 7

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

sequence-specific DNA binding

metal ion binding

 
1557347_at 0.158 5.498 2.319 3.473e-02 0.279 -3.846 MCPH1 microcephalin 1 8 6251528 N21605 8p23.1 Hs.709634 32

intracellular

centrosome

 
201209_at 0.275 6.495 2.319 3.473e-02 0.279 -3.846 HDAC1 histone deacetylase 1 1 32530294 NM_004964 1p34 Hs.88556 295

transcription factor activity

histone deacetylase activity

nucleus

cytoplasm

chromatin remodeling

anti-apoptosis

transcription factor binding

transcription factor binding

positive regulation of cell proliferation

positive regulation of specific transcription from RNA polymerase II promoter

positive regulation of receptor biosynthetic process

transcription activator activity

histone deacetylation

Sin3 complex

NuRD complex

hydrolase activity

enzyme binding

identical protein binding

interspecies interaction between organisms

regulation of transcription

Cell cycle

Notch signaling pathway

Huntington's disease

Pathways in cancer

Chronic myeloid leukemia

238494_at -0.476 6.661 -2.318 3.475e-02 0.279 -3.847 TRAF3IP1 TNF receptor-associated factor 3 interacting protein 1 2 238893923 AI623155 2q37.3 Hs.631898 5

cytoplasm

cytoskeleton

 
225445_at -0.276 7.067 -2.318 3.475e-02 0.279 -3.847 UBN2 ubinuclein 2 7 138566770 AI332346 7q34 Hs.153458 Hs.511486 Hs.624688 4    
210514_x_at 0.240 7.822 2.318 3.478e-02 0.279 -3.848 HLA-G major histocompatibility complex, class I, G 6 29902734, 1247153, 1049287 AF226990 6p21.3 Hs.512152 316

antigen processing and presentation of peptide antigen via MHC class I

immune response

cellular defense response

membrane

integral to membrane

antigen processing and presentation

MHC class I receptor activity

MHC class I protein complex

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

223510_at 0.251 4.355 2.318 3.479e-02 0.279 -3.848 NRP2 neuropilin 2 2 206255468, 206255468, 206255468 AF280545 2q33.3 Hs.471200 44

receptor activity

vascular endothelial growth factor receptor activity

membrane fraction

plasma membrane

cell adhesion

multicellular organismal development

nervous system development

axon guidance

integral to membrane

cell differentiation

 
212848_s_at -0.499 10.238 -2.318 3.479e-02 0.279 -3.848 C9orf3 chromosome 9 open reading frame 3 9 96528814 BG036668 9q22.32 Hs.434253 5

aminopeptidase activity

binding

cytoplasm

proteolysis

peptidase activity

metallopeptidase activity

zinc ion binding

leukotriene biosynthetic process

metal ion binding

 
208335_s_at 0.423 5.922 2.318 3.480e-02 0.279 -3.848 DARC Duffy blood group, chemokine receptor 1 157441133, 157441824 NM_002036 1q21-q22 Hs.153381 65

G-protein coupled receptor activity

chemokine receptor activity

plasma membrane

defense response

signal transduction

G-protein coupled receptor protein signaling pathway

integral to membrane

 
236874_at 0.236 5.570 2.317 3.481e-02 0.279 -3.849 LOC100128071 similar to hCG41624 1   AI634963 1p35.1 Hs.660539 1    
212511_at -0.336 6.778 -2.317 3.482e-02 0.279 -3.849 PICALM phosphatidylinositol binding clathrin assembly protein 11 -85346132 AI766247 11q14 Hs.163893 22

phospholipid binding

phosphatidylinositol binding

Golgi apparatus

coated pit

protein complex assembly

receptor-mediated endocytosis

membrane

clathrin coat

clathrin-coated vesicle

clathrin binding

cytoplasmic vesicle

clathrin coat assembly

 
243386_at -0.283 7.551 -2.317 3.483e-02 0.279 -3.849 CASZ1 castor zinc finger 1 1 -10629856, -10619252 AI085338 1p36.22 Hs.439894 10

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
208054_at -0.172 2.643 -2.317 3.484e-02 0.279 -3.849 HERC4 hect domain and RLD 4 10 -69351661 NM_015601 10q21.3 Hs.51891 7

intracellular

cytoplasm

cytosol

protein modification process

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

Ubiquitin mediated proteolysis

201698_s_at 0.149 7.575 2.317 3.484e-02 0.279 -3.849 SFRS9 splicing factor, arginine/serine-rich 9 12 -119383853 NM_003769 12q24.31 Hs.706889 26

nucleotide binding

nuclear mRNA splicing, via spliceosome

RNA binding

nucleus

mRNA splice site selection

RNA splicing

 
224701_at 0.290 6.065 2.317 3.486e-02 0.279 -3.850 PARP14 poly (ADP-ribose) polymerase family, member 14 3 123882361 AA056548 3q21.1 Hs.518203 9

NAD+ ADP-ribosyltransferase activity

protein binding

nucleus

cytoplasm

plasma membrane

transferase activity, transferring glycosyl groups

regulation of transcription

 
237981_at -0.593 9.606 -2.317 3.486e-02 0.279 -3.850 CMYA5 cardiomyopathy associated 5 5 79021414 AA195941 5q14.1 Hs.482625 7

cytoplasm

identical protein binding

perinuclear region of cytoplasm

 
223029_s_at 0.157 6.342 2.316 3.487e-02 0.279 -3.850 TRAF7 TNF receptor-associated factor 7 16 2145799 AI806564 16p13.3 Hs.643537 Hs.713632 6

ubiquitin ligase complex

activation of MAPKKK activity

ubiquitin-protein ligase activity

GTP binding

zinc ion binding

protein ubiquitination

ligase activity

regulation of exocytosis

modification-dependent protein catabolic process

intrinsic to plasma membrane

cytoplasmic vesicle

exocrine system development

identical protein binding

regulation of apoptosis

positive regulation of MAPKKK cascade

regulation of transcription

metal ion binding

 
209068_at -0.439 7.173 -2.316 3.487e-02 0.279 -3.850 HNRPDL heterogeneous nuclear ribonucleoprotein D-like 4 -83563370 D89678 4q13-q21 Hs.527105 14

nucleotide binding

DNA binding

double-stranded DNA binding

single-stranded DNA binding

RNA binding

protein binding

nucleus

cytoplasm

RNA processing

poly(A) RNA binding

heterogeneous nuclear ribonucleoprotein complex

regulation of transcription

 
204171_at -0.267 5.842 -2.316 3.488e-02 0.279 -3.850 RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 17 55325224 NM_003161 17q23.1 Hs.463642 123

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

cytoplasm

cytosol

protein amino acid phosphorylation

signal transduction

transferase activity

synaptosome

cell junction

synapse

ErbB signaling pathway

mTOR signaling pathway

TGF-beta signaling pathway

Fc gamma R-mediated phagocytosis

Insulin signaling pathway

Acute myeloid leukemia

228227_at 0.215 4.421 2.316 3.491e-02 0.279 -3.851 ITGB1BP1 integrin beta 1 binding protein 1 2 -9463265 BF435077 2p25.2 Hs.467662 22

ruffle

protein binding

cytoplasm

cytosol

cell-matrix adhesion

protein kinase cascade

membrane

cell migration

lamellipodium

 
201892_s_at -0.329 9.409 -2.316 3.491e-02 0.279 -3.851 IMPDH2 IMP (inosine monophosphate) dehydrogenase 2 3 -49036765 NM_000884 3p21.2 Hs.654400 31

IMP dehydrogenase activity

IMP dehydrogenase activity

protein binding

cytosol

purine nucleotide biosynthetic process

GMP biosynthetic process

oxidoreductase activity

potassium ion binding

lymphocyte proliferation

metal ion binding

oxidation reduction

Purine metabolism

Drug metabolism - other enzymes

Biosynthesis of alkaloids derived from histidine and purine

Metabolic pathways

1553634_a_at 0.227 4.011 2.316 3.491e-02 0.279 -3.851 FLJ40852 hypothetical LOC285962 7 -141050606 NM_173677 7q34 Hs.17589 2    
210162_s_at -0.428 6.271 -2.316 3.493e-02 0.279 -3.851 NFATC1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 18 75256759, 75256759, 75261313 U08015 18q23 Hs.534074 Hs.701518 83

transcription factor activity

FK506 binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

intracellular signaling cascade

transcription activator activity

Wnt signaling pathway

Axon guidance

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

225246_at -0.254 4.306 -2.316 3.493e-02 0.279 -3.852 STIM2 stromal interaction molecule 2 4 26471461 T97323 4p15.2 Hs.135763 15

calcium channel regulator activity

calcium ion binding

protein binding

endoplasmic reticulum

plasma membrane

ion transport

cellular calcium ion homeostasis

integral to membrane

negative regulation of calcium ion transport via store-operated calcium channel activity

activation of store-operated calcium channel activity

activation of store-operated calcium channel activity

positive regulation of calcium ion transport

positive regulation of calcium ion transport

 
200762_at 0.337 8.276 2.315 3.495e-02 0.279 -3.852 DPYSL2 dihydropyrimidinase-like 2 8 26491337 NM_001386 8p22-p21 Hs.173381 40

dihydropyrimidinase activity

protein binding

cytoplasm

mitochondrion

cytoskeleton

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

signal transduction

multicellular organismal development

nervous system development

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds

cell differentiation

axon

dendrite

cell soma

Axon guidance

238792_at 0.262 5.515 2.315 3.495e-02 0.279 -3.852 PCNX pecanex homolog (Drosophila) 14 70443874 BF209668 14q24.2 Hs.446559 10

membrane

integral to membrane

 
221475_s_at 0.238 11.407 2.315 3.496e-02 0.279 -3.852 RPL15 ribosomal protein L15 3 23933642 NM_002948 3p24.2 Hs.381219 Hs.695621 14

RNA binding

structural constituent of ribosome

intracellular

cytosol

ribosome

translational elongation

Ribosome

202795_x_at 0.205 6.784 2.315 3.496e-02 0.279 -3.852 TRIOBP TRIO and F-actin binding protein 22 36422940, 36472186, 36472186 NM_007032 22q13.1 Hs.533030 20

actin binding

protein binding

nucleus

cytoplasm

actin cytoskeleton

GTP-Rho binding

actin modification

myosin II binding

barbed-end actin filament capping

 
225866_at -0.275 8.184 -2.315 3.498e-02 0.279 -3.853 BXDC1 brix domain containing 1 6 111409983 AA976536 6q21 Hs.372265 8

protein binding

nucleus

nucleolus

 
242639_at -0.494 3.568 -2.315 3.498e-02 0.279 -3.853 NARG2 NMDA receptor regulated 2 15 -58499099 AW340004 15q22.2 Hs.200943 6

nucleus

 
228535_at -0.347 7.018 -2.315 3.499e-02 0.279 -3.853 RAD1 RAD1 homolog (S. pombe) 5 -34941124, -34941122 AI796010 5p13.2 Hs.38114 44

cell cycle checkpoint

DNA damage checkpoint

damaged DNA binding

protein binding

nucleus

DNA replication

DNA repair

response to DNA damage stimulus

meiotic prophase I

3'-5' exonuclease activity

3'-5' exonuclease activity

exodeoxyribonuclease III activity

hydrolase activity

 
40446_at -0.179 8.792 -2.315 3.500e-02 0.279 -3.853 PHF1 PHD finger protein 1 6 33486750 AL021366 6p21.3 Hs.166204 15

nucleic acid binding

transcription factor activity

protein binding

nucleus

zinc ion binding

chromatin modification

regulation of transcription

metal ion binding

 
1562581_at 0.252 4.926 2.315 3.500e-02 0.279 -3.853 LOC254028 hypothetical LOC254028 14   AK093210 14q11.2 Hs.652569 2    
227612_at 0.198 3.583 2.314 3.501e-02 0.279 -3.854 ELAVL3 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C) 19 -11423142 R20763 19p13.2 Hs.1701 8

nucleotide binding

RNA binding

multicellular organismal development

nervous system development

cell differentiation

 
207843_x_at 0.246 7.507 2.314 3.504e-02 0.279 -3.854 CYB5A cytochrome b5 type A (microsomal) 18 -70071506 NM_001914 18q23 Hs.465413 38

aldo-keto reductase activity

cytochrome-c oxidase activity

cytoplasm

mitochondrion

mitochondrial outer membrane

endoplasmic reticulum

microsome

transport

membrane

integral to membrane

heme binding

electron transport chain

metal ion binding

 
221049_s_at 0.175 6.959 2.314 3.507e-02 0.280 -3.855 POLL polymerase (DNA directed), lambda 10 -103328628 NM_013274 10q23 Hs.523230 47

DNA binding

DNA-directed DNA polymerase activity

intracellular

nucleus

DNA replication

nucleotide-excision repair

response to DNA damage stimulus

somatic hypermutation of immunoglobulin genes

transferase activity

nucleotidyltransferase activity

lyase activity

manganese ion binding

metal ion binding

Base excision repair

Non-homologous end-joining

1566472_s_at 0.465 4.355 2.313 3.512e-02 0.280 -3.856 RETSAT retinol saturase (all-trans-retinol 13,14-reductase) 2 -85422589 AK098125 2p11.2 Hs.440401 11

nuclear outer membrane

endoplasmic reticulum

endoplasmic reticulum membrane

electron carrier activity

membrane

oxidoreductase activity

retinol metabolic process

all-trans-retinol 13,14-reductase activity

oxidation reduction

Retinol metabolism

209939_x_at 0.465 8.223 2.313 3.514e-02 0.280 -3.857 CFLAR CASP8 and FADD-like apoptosis regulator 2 201689060, 201689134, 201691631 AF005775 2q33-q34 Hs.390736 163

cysteine-type endopeptidase activity

protein binding

proteolysis

anti-apoptosis

induction of apoptosis by extracellular signals

regulation of apoptosis

positive regulation of I-kappaB kinase/NF-kappaB cascade

interspecies interaction between organisms

Apoptosis

239837_at 0.267 4.945 2.312 3.515e-02 0.280 -3.857 ADAM11 ADAM metallopeptidase domain 11 17 40192093 T15748 17q21.3 Hs.6088 11

metalloendopeptidase activity

integrin binding

plasma membrane

proteolysis

integrin-mediated signaling pathway

zinc ion binding

integral to membrane

 
218115_at 0.229 5.553 2.312 3.516e-02 0.280 -3.857 ASF1B ASF1 anti-silencing function 1 homolog B (S. cerevisiae) 19 -14091320 NM_018154 19p13.12 Hs.26516 15

chromatin

nucleus

chromatin assembly or disassembly

nucleosome assembly

multicellular organismal development

spermatogenesis

chromatin modification

cell differentiation

histone binding

regulation of transcription

 
1554514_at -0.243 3.375 -2.312 3.518e-02 0.280 -3.858 ACSM5 acyl-CoA synthetase medium-chain family member 5 16 20328356 BC013753 16p12.3 Hs.659606 3

nucleotide binding

magnesium ion binding

ATP binding

GTP binding

mitochondrion

mitochondrial matrix

lipid metabolic process

fatty acid metabolic process

metabolic process

ligase activity

butyrate-CoA ligase activity

Butanoate metabolism

Metabolic pathways

225105_at 1.571 8.723 2.312 3.519e-02 0.280 -3.858 C12orf75 chromosome 12 open reading frame 75 12 104248543 BF969397 12q23.3 Hs.368938 3    
222708_s_at -0.292 6.542 -2.312 3.519e-02 0.280 -3.858 STX17 syntaxin 17 9 101708735 AW014619 9q31.1 Hs.709465 7

SNAP receptor activity

nucleolus

endoplasmic reticulum

intracellular protein transport

membrane

integral to membrane

vesicle-mediated transport

SNARE interactions in vesicular transport

212469_at -0.227 7.255 -2.312 3.519e-02 0.280 -3.858 NIPBL Nipped-B homolog (Drosophila) 5 36912617 AB019494 5p13.2 Hs.481927 22

protein binding

nucleus

cell cycle

cohesin loading complex

maintenance of mitotic sister chromatid cohesion

 
200001_at 0.334 9.764 2.312 3.519e-02 0.280 -3.858 CAPNS1 calpain, small subunit 1 19 41322757 NM_001749 19q13.12 Hs.515371 29

calcium-dependent cysteine-type endopeptidase activity

calcium ion binding

protein binding

nucleus

cytoplasm

plasma membrane

positive regulation of cell proliferation

 
214797_s_at 0.362 6.045 2.311 3.521e-02 0.280 -3.859 PCTK3 PCTAIRE protein kinase 3 1 203740349 BC000281 1q31-q32 Hs.445402 13

nucleotide binding

cyclin-dependent protein kinase activity

signal transducer activity

protein binding

ATP binding

cellular_component

protein amino acid phosphorylation

signal transduction

transferase activity

 
1554233_at 0.486 4.876 2.311 3.522e-02 0.280 -3.859 C1QTNF9 C1q and tumor necrosis factor related protein 9 13 23781715 BC040438 13q12.12 Hs.362854 3

extracellular region

 
208881_x_at -0.417 9.629 -2.311 3.524e-02 0.280 -3.859 IDI1 isopentenyl-diphosphate delta isomerase 1 10 -1075963 BC005247 10p15.3 Hs.283652 Hs.719114 11

magnesium ion binding

isopentenyl-diphosphate delta-isomerase activity

peroxisome

cytosol

cholesterol biosynthetic process

isoprenoid biosynthetic process

carotenoid biosynthetic process

hydrolase activity

isomerase activity

Terpenoid backbone biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

236951_at 0.167 5.211 2.311 3.526e-02 0.280 -3.860 NSFL1C NSFL1 (p97) cofactor (p47) 20 -1370810 BE550891 20p13 Hs.12865 20

protein binding

nucleus

Golgi apparatus

Golgi stack

lipid binding

 
211615_s_at 0.204 9.279 2.311 3.526e-02 0.280 -3.860 LRPPRC leucine-rich PPR-motif containing 2 -43966866 M92439 2p21 Hs.368084 15

condensed nuclear chromosome

DNA binding

single-stranded DNA binding

RNA binding

protein binding

nucleus

nuclear inner membrane

nuclear outer membrane

nucleoplasm

cytoplasm

mitochondrion

cytoskeleton

transport

microtubule binding

membrane

mitochondrial nucleoid

regulation of transcription

mitochondrion transport along microtubule

perinuclear region of cytoplasm

beta-tubulin binding

actin filament binding

mRNA transport

 
230080_at 0.228 5.086 2.311 3.527e-02 0.280 -3.860 LOC285943 hypothetical protein LOC285943 7   T89711 7p15.2 Hs.714774 1    
1552853_at 0.278 3.869 2.311 3.527e-02 0.280 -3.860 VWA5B1 von Willebrand factor A domain containing 5B1 1 20489998 NM_144623 1p36.12 Hs.205178 3

extracellular region

 
229419_at -0.462 8.017 -2.311 3.527e-02 0.280 -3.860 FBXW7 F-box and WD repeat domain containing 7 4 -153461859, -153461859, -153461859 BF222826 4q31.3 Hs.679796 71

protein binding

nucleus

protein ubiquitination

modification-dependent protein catabolic process

Ubiquitin mediated proteolysis

239813_at 0.234 3.663 2.311 3.528e-02 0.280 -3.860 IQCH IQ motif containing H 15 65334241, 65334247 AA789195 15q23 Hs.657894 5    
240422_at -0.223 2.610 -2.310 3.529e-02 0.280 -3.861 FMO5 flavin containing monooxygenase 5 1 -145124461, -145122508 AI935710 1q21.1 Hs.642706 Hs.719397 18

monooxygenase activity

flavin-containing monooxygenase activity

endoplasmic reticulum

microsome

biological_process

membrane

integral to membrane

intrinsic to endoplasmic reticulum membrane

FAD binding

NADP or NADPH binding

oxidation reduction

Drug metabolism - cytochrome P450

35974_at 0.246 4.400 2.310 3.530e-02 0.280 -3.861 LRMP lymphoid-restricted membrane protein 12 25096507 U10485 12p12.1 Hs.124922 9

cytoplasm

endoplasmic reticulum

endoplasmic reticulum membrane

integral to plasma membrane

vesicle targeting

vesicle fusion

membrane

 
215946_x_at 0.276 5.094 2.310 3.530e-02 0.280 -3.861 IGLL3 immunoglobulin lambda-like polypeptide 3 22 24043887 AL022324 22q11.2 22q11.23 Hs.567636 3    
217437_s_at 0.233 6.316 2.310 3.530e-02 0.280 -3.861 TACC1 transforming, acidic coiled-coil containing protein 1 8 38704860, 38763878 AB029026 8p11.22 Hs.279245 22

protein binding

nucleus

cytoplasm

cell cycle

cell division

 
219142_at 0.248 4.413 2.310 3.532e-02 0.280 -3.861 RASL11B RAS-like, family 11, member B 4 53423251 NM_023940 4q12 Hs.8035 5    
1555548_at 0.232 4.621 2.310 3.535e-02 0.281 -3.862 NDUFA10 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa 2 -240548828 AF453834 2q37.3 Hs.277677 11

ATP binding

mitochondrion

mitochondrial respiratory chain complex I

mitochondrial matrix

mitochondrial electron transport, NADH to ubiquinone

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

transport

NADH dehydrogenase (ubiquinone) activity

phosphotransferase activity, alcohol group as acceptor

electron transport chain

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

214731_at 0.222 5.140 2.309 3.536e-02 0.281 -3.862 CTTNBP2NL CTTNBP2 N-terminal like 1 112740322 AB037854 1p13.2 Hs.485899 15

actin cytoskeleton

 
208338_at 0.231 4.060 2.309 3.538e-02 0.281 -3.863 P2RX3 purinergic receptor P2X, ligand-gated ion channel, 3 11 56862524 NM_002559 11q12 Hs.146738 15

purinergic nucleotide receptor activity

response to hypoxia

receptor activity

ATP-gated cation channel activity

ion channel activity

ATP binding

integral to plasma membrane

cation transport

signal transduction

neuromuscular synaptic transmission

response to heat

response to cold

response to carbohydrate stimulus

positive regulation of calcium ion transport into cytosol

urinary bladder smooth muscle contraction

membrane

axon

peristalsis

response to ATP

protein homodimerization activity

intracellular part

protein heterodimerization activity

regulation of synaptic plasticity

behavioral response to pain

positive regulation of calcium-mediated signaling

response to stimulus

sensory perception of taste

Calcium signaling pathway

Neuroactive ligand-receptor interaction

238432_at 0.373 5.421 2.309 3.539e-02 0.281 -3.863 FLJ35776 hypothetical LOC649446 18 3584111 AI275162 18p11.31 Hs.19872 2    
213025_at -0.372 6.787 -2.309 3.540e-02 0.281 -3.863 THUMPD1 THUMP domain containing 1 16 -20652489 AL134904 16p12.3 Hs.460232 5    
227790_at -0.590 4.820 -2.309 3.541e-02 0.281 -3.863 UBE2CBP ubiquitin-conjugating enzyme E2C binding protein 6 -83658905 AV692609 6q14.1 Hs.148609 2

cytoplasm

ligase activity

modification-dependent protein catabolic process

 
218118_s_at 0.286 8.965 2.309 3.541e-02 0.281 -3.864 TIMM23 translocase of inner mitochondrial membrane 23 homolog (yeast) 10 -51262093 NM_006327 10q11.21-q11.23 Hs.499594 Hs.524308 Hs.536158 Hs.661964 9

protein binding

mitochondrion

mitochondrial inner membrane presequence translocase complex

mitochondrial intermembrane space

protein targeting to mitochondrion

protein transporter activity

P-P-bond-hydrolysis-driven protein transmembrane transporter activity

membrane

integral to membrane

intracellular protein transmembrane transport

 
229696_at -0.246 6.154 -2.309 3.541e-02 0.281 -3.864 FECH ferrochelatase (protoporphyria) 18 -53363070 AI807483 18q21.3 Hs.365365 61

ferrochelatase activity

ferrochelatase activity

protein binding

mitochondrion

mitochondrial inner membrane

mitochondrial matrix

generation of precursor metabolites and energy

heme biosynthetic process

ferrous iron binding

response to light stimulus

detection of UV

membrane

protoporphyrinogen IX metabolic process

metal ion binding

2 iron, 2 sulfur cluster binding

Porphyrin and chlorophyll metabolism

Metabolic pathways

209341_s_at -0.620 7.254 -2.309 3.541e-02 0.281 -3.864 IKBKB inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta 8 42247985 AU153366 8p11.2 Hs.597664 172

nucleotide binding

B cell homeostasis

ATP binding

cytoplasm

cytosol

protein amino acid phosphorylation

IkappaB kinase activity

transcription activator activity

transferase activity

identical protein binding

positive regulation of NF-kappaB transcription factor activity

MAPK signaling pathway

Chemokine signaling pathway

Apoptosis

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

T cell receptor signaling pathway

B cell receptor signaling pathway

Neurotrophin signaling pathway

Insulin signaling pathway

Adipocytokine signaling pathway

Type II diabetes mellitus

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Pancreatic cancer

Prostate cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Small cell lung cancer

211913_s_at 0.196 3.095 2.309 3.541e-02 0.281 -3.864 MERTK c-mer proto-oncogene tyrosine kinase 2 112372661 L08961 2q14.1 Hs.306178 32

nucleotide binding

photoreceptor outer segment

transmembrane receptor protein tyrosine kinase activity

receptor activity

ATP binding

soluble fraction

integral to plasma membrane

protein amino acid phosphorylation

phagocytosis

cell surface receptor linked signal transduction

cell-cell signaling

visual perception

membrane

transferase activity

response to stimulus

 
223068_at 0.258 5.909 2.308 3.542e-02 0.281 -3.864 EML4 echinoderm microtubule associated protein like 4 2 42249993 AV707345 2p22-p21 Hs.593614 22

molecular_function

protein binding

cytoplasm

microtubule

microtubule-based process

mitosis

 
1566888_at 0.197 2.533 2.308 3.543e-02 0.281 -3.864 THADA thyroid adenoma associated 2 -43311478, -43311478 BC037847 2p21 Hs.369592 17

binding

 
213130_at 0.185 5.301 2.308 3.544e-02 0.281 -3.864 ZNF473 zinc finger protein 473 19 55221023 AB032967 19q13.33 Hs.440553 8

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1557059_at -0.185 4.881 -2.308 3.544e-02 0.281 -3.864 LOC254128 hypothetical protein LOC254128 2   AK098264 2q14.2 Hs.712685 1    
1569433_at -0.173 1.937 -2.308 3.544e-02 0.281 -3.864 SAMD5 sterile alpha motif domain containing 5 6 147871755 BC020896 6q24.3 Hs.567973 1    
201414_s_at -0.244 7.696 -2.308 3.545e-02 0.281 -3.865 NAP1L4 nucleosome assembly protein 1-like 4 11 -2922235 NM_005969 11p15.5 Hs.501684 Hs.695395 12

nucleus

chromatin assembly complex

cytoplasm

nucleosome assembly

unfolded protein binding

 
206705_at 0.217 4.986 2.308 3.547e-02 0.281 -3.865 TULP1 tubby like protein 1 6 -35573628 NM_003322 6p21.3 Hs.485208 20

protein binding

visual perception

response to stimulus

 
222689_at 0.422 3.515 2.308 3.547e-02 0.281 -3.865 ACER3 alkaline ceramidase 3 11 76249564 N51263 11q13.5 Hs.23862 5

Golgi membrane

endoplasmic reticulum

endoplasmic reticulum membrane

Golgi apparatus

ceramide metabolic process

membrane

integral to membrane

hydrolase activity

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides

Sphingolipid metabolism

212425_at -0.392 6.087 -2.307 3.551e-02 0.281 -3.866 SCAMP1 secretory carrier membrane protein 1 5 77692094 AL049223 5q13.3-q14.1 Hs.482587 22

protein binding

endosome

Golgi apparatus

trans-Golgi network

post-Golgi vesicle-mediated transport

protein transport

membrane

integral to membrane

recycling endosome membrane

 
204440_at 0.240 5.614 2.307 3.551e-02 0.281 -3.866 CD83 CD83 molecule 6 14225843 NM_004233 6p23 Hs.595133 44

plasma membrane

integral to plasma membrane

defense response

humoral immune response

signal transduction

external side of plasma membrane

response to organic cyclic substance

negative regulation of interleukin-4 production

positive regulation of interleukin-10 production

positive regulation of interleukin-2 production

positive regulation of CD4-positive, alpha beta T cell differentiation

 
230155_x_at 0.306 5.392 2.307 3.551e-02 0.281 -3.866 MSL1 male-specific lethal 1 homolog (Drosophila) 17 35532315 AI800794 17q21.1 Hs.532786 5

nucleus

chromatin modification

 
213900_at -0.400 8.078 -2.307 3.552e-02 0.281 -3.866 FAM189A2 family with sequence similarity 189, member A2 9 71129307, 71134060 AA524029 9q13-q21 Hs.118003 6

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
241670_x_at 0.289 5.155 2.307 3.553e-02 0.281 -3.867 LOC729177 hypothetical LOC729177 6   N22836 6p22.3 Hs.712707 2    
203897_at 0.192 8.890 2.307 3.553e-02 0.281 -3.867 LYRM1 LYR motif containing 1 16 20819057, 20819575 BE963444 16p11.2 Hs.185489 6

nucleus

 
203515_s_at 0.227 7.363 2.307 3.554e-02 0.281 -3.867 PMVK phosphomevalonate kinase 1 -153163831 NM_006556 1q22 Hs.30954 12

nucleotide binding

phosphomevalonate kinase activity

protein binding

ATP binding

cytoplasm

peroxisome

protein amino acid phosphorylation

cholesterol biosynthetic process

transferase activity

Terpenoid backbone biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

238058_at -0.370 9.301 -2.307 3.555e-02 0.281 -3.867 LOC150381 hypothetical LOC150381 22 44828389 AA603041 22q13.31 Hs.659113 1    
1553976_a_at 0.348 6.250 2.307 3.555e-02 0.281 -3.867 RP11-529I10.4 deleted in a mouse model of primary ciliary dyskinesia 10 103338078 BC031695 10q24.32 Hs.658128 4

protein binding

 
219076_s_at 0.305 7.807 2.307 3.555e-02 0.281 -3.867 PXMP2 peroxisomal membrane protein 2, 22kDa 12 131774264 NM_018663 12q24.33 Hs.430299 5

protein binding

peroxisome

membrane

integral to membrane

 
202994_s_at 0.607 6.443 2.307 3.555e-02 0.281 -3.867 FBLN1 fibulin 1 22 44277382, 44277382, 44277382, 44277382 Z95331 22q13.31 Hs.24601 Hs.593123 55

extracellular matrix structural constituent

calcium ion binding

protein binding

extracellular region

proteinaceous extracellular matrix

extracellular space

soluble fraction

interspecies interaction between organisms

 
1558136_s_at -0.273 7.191 -2.306 3.555e-02 0.281 -3.867 TAF11 TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa 6 -34953532 BQ709323 6p21.31 Hs.112444 30

DNA binding

transcription coactivator activity

nucleus

nucleoplasm

transcription factor TFIID complex

transcription initiation from RNA polymerase II promoter

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

general RNA polymerase II transcription factor activity

vitamin D receptor binding

positive regulation by host of viral transcription

regulation of transcription

thyroid hormone receptor binding

protein N-terminus binding

Basal transcription factors

242555_at -0.295 4.426 -2.306 3.556e-02 0.281 -3.867 C16orf87 chromosome 16 open reading frame 87 16 -45393459 AW578854 16q11.2 Hs.406551 1    
201987_at -0.234 9.704 -2.306 3.556e-02 0.281 -3.867 MED13 mediator complex subunit 13 17 -57374747 AI984051 17q22-q23 Hs.282678 26

receptor activity

nucleus

transcription initiation from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

ligand-dependent nuclear receptor transcription coactivator activity

androgen receptor signaling pathway

vitamin D receptor binding

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

thyroid hormone receptor binding

 
243550_at -0.240 2.846 -2.306 3.556e-02 0.281 -3.867 ZDHHC21 zinc finger, DHHC-type containing 21 9 -14607032 AA564788 9p22.3 Hs.649522 4

zinc ion binding

acyltransferase activity

membrane

integral to membrane

transferase activity

metal ion binding

 
212612_at -0.385 6.994 -2.306 3.556e-02 0.281 -3.867 RCOR1 REST corepressor 1 14 102128985 D31888 14q32.31 Hs.510521 28

DNA binding

protein binding

nucleus

chromatin modification

interspecies interaction between organisms

regulation of transcription

Huntington's disease

202595_s_at 0.255 6.046 2.306 3.557e-02 0.281 -3.868 LEPROTL1 leptin receptor overlapping transcript-like 1 8 30072463, 30072463 AF161461 8p21.2-p21.1 Hs.146585 8

membrane

integral to membrane

 
205743_at 0.292 6.332 2.306 3.558e-02 0.281 -3.868 STAC SH3 and cysteine rich domain 3 36397100 NM_003149 3p22.3 Hs.56045 4

soluble fraction

cytoplasm

intracellular signaling cascade

zinc ion binding

diacylglycerol binding

cellular response to heat

metal ion binding

 
217902_s_at -0.219 8.060 -2.306 3.559e-02 0.281 -3.868 HERC2 hect domain and RLD 2 15 -26029782 NM_004667 15q13 Hs.434890 Hs.610412 24

ubiquitin-protein ligase activity

guanyl-nucleotide exchange factor activity

protein binding

cellular_component

intracellular

anaphase-promoting complex

protein modification process

intracellular protein transport

zinc ion binding

protein ubiquitination

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

heme binding

regulation of mitotic metaphase/anaphase transition

metal ion binding

Ubiquitin mediated proteolysis

235175_at 0.358 4.978 2.306 3.559e-02 0.281 -3.868 GBP4 guanylate binding protein 4 1 -89419418 BG260886 1p22.2 Hs.409925 4

nucleotide binding

GTPase activity

GTP binding

cytoplasm

immune response

 
204001_at -0.296 6.178 -2.306 3.560e-02 0.281 -3.868 SNAPC3 small nuclear RNA activating complex, polypeptide 3, 50kDa 9 15412781 NM_003084 9p22.3 Hs.546299 12

DNA binding

protein binding

nucleus

transcription from RNA polymerase II promoter

transcription from RNA polymerase III promoter

snRNA transcription

regulation of transcription

 
1561820_at -0.288 4.728 -2.306 3.560e-02 0.281 -3.868 SCN8A sodium channel, voltage gated, type VIII, alpha subunit 12 50271286 BQ337986 12q13 Hs.710638 18

nucleotide binding

voltage-gated sodium channel complex

voltage-gated ion channel activity

voltage-gated sodium channel activity

ATP binding

ion transport

sodium ion transport

nervous system development

membrane

integral to membrane

regulation of action potential in neuron

sodium ion binding

 
222414_at -0.311 7.217 -2.305 3.563e-02 0.281 -3.869 MLL3 myeloid/lymphoid or mixed-lineage leukemia 3 7 -151462942 AA121529 7q36.1 Hs.647120 21

DNA binding

protein binding

nucleus

regulation of transcription, DNA-dependent

intracellular signaling cascade

methyltransferase activity

zinc ion binding

chromatin modification

transferase activity

histone-lysine N-methyltransferase activity

metal ion binding

 
1565559_at 0.267 5.365 2.305 3.564e-02 0.281 -3.869 MAGIX MAGI family member, X-linked X 48906124, 48907213 AW418579 Xp11.23 Hs.193170 3

protein binding

 
202301_s_at -0.392 7.267 -2.305 3.564e-02 0.281 -3.869 RSRC2 arginine/serine-rich coiled-coil 2 12 -121555225, -121555225 BE396879 12q24.31 Hs.432996 4    
230839_at 0.190 5.113 2.305 3.565e-02 0.281 -3.869 PRMT8 protein arginine methyltransferase 8 12 3470685 AK026786 12p13.3 Hs.504530 9

nucleus

plasma membrane

histone-arginine N-methyltransferase activity

S-adenosylmethionine-dependent methyltransferase activity

histone methylation

transferase activity

peptidyl-arginine methylation

peptidyl-arginine methylation, to asymmetrical-dimethyl arginine

protein-arginine omega-N monomethyltransferase activity

protein-arginine omega-N asymmetric methyltransferase activity

protein homodimerization activity

regulation of protein binding

protein heterodimerization activity

 
217994_x_at -0.246 7.249 -2.305 3.565e-02 0.281 -3.870 CPSF3L cleavage and polyadenylation specific factor 3-like 1 -1236827 NM_017871 1p36.33 Hs.6449 11

nucleus

cytoplasm

hydrolase activity

 
205344_at 0.226 5.517 2.305 3.565e-02 0.281 -3.870 CSPG5 chondroitin sulfate proteoglycan 5 (neuroglycan C) 3 -47578731 NM_006574 3p21.3 Hs.45127 9

protein binding

protein binding

membrane fraction

endoplasmic reticulum

Golgi apparatus

plasma membrane

integral to plasma membrane

multicellular organismal development

nervous system development

growth factor activity

cell differentiation

Golgi-associated vesicle membrane

regulation of growth

intracellular transport

 
203321_s_at 0.222 5.599 2.305 3.565e-02 0.281 -3.870 ADNP2 ADNP homeobox 2 18 75967902 AK022688 18q23 Hs.131915 5

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

sequence-specific DNA binding

metal ion binding

 
232692_at -0.524 4.698 -2.305 3.566e-02 0.281 -3.870 TDRD6 tudor domain containing 6 6 46763824 AA404231 6p12.3 Hs.656983 5

nucleic acid binding

 
241621_at -0.282 3.259 -2.305 3.566e-02 0.281 -3.870 SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 18 2645885 AW974517 18p11.32 Hs.8118 6

protein binding

ATP binding

chromosome

chromosome organization

 
202671_s_at 0.418 6.640 2.305 3.568e-02 0.281 -3.870 PDXK pyridoxal (pyridoxine, vitamin B6) kinase 21 43963405 NM_003681 21q22.3 Hs.284491 24

nucleotide binding

magnesium ion binding

ATP binding

cytoplasm

cytosol

zinc ion binding

cell proliferation

pyridoxal kinase activity

pyridoxine biosynthetic process

transferase activity

pyridoxal phosphate binding

potassium ion binding

sodium ion binding

lithium ion binding

protein homodimerization activity

vitamin B6 metabolic process

pyridoxal phosphate biosynthetic process

Vitamin B6 metabolism

Metabolic pathways

214701_s_at 0.250 4.252 2.305 3.568e-02 0.281 -3.870 FN1 fibronectin 1 2 -215987628, -215933423 AJ276395 2q34 Hs.203717 291

extracellular matrix structural constituent

collagen binding

extracellular region

extracellular region

fibrinogen complex

proteinaceous extracellular matrix

ER-Golgi intermediate compartment

acute-phase response

cell adhesion

heparin binding

regulation of cell shape

response to wounding

cell migration

peptide cross-linking

platelet alpha granule lumen

substrate adhesion-dependent cell spreading

Focal adhesion

ECM-receptor interaction

Regulation of actin cytoskeleton

Pathways in cancer

Small cell lung cancer

216217_at 0.252 5.384 2.304 3.570e-02 0.281 -3.871 PLCL2 phospholipase C-like 2 3 16901455, 16949585 AK023546 3p24.3 Hs.202010 7

phosphoinositide phospholipase C activity

signal transducer activity

calcium ion binding

cytoplasm

lipid metabolic process

intracellular signaling cascade

 
217073_x_at 0.226 4.189 2.304 3.571e-02 0.281 -3.871 APOA1 apolipoprotein A-I 11 -116211678, 13497 X02162 11q23-q24 Hs.633003 424

beta-amyloid binding

negative regulation of cytokine secretion during immune response

phospholipid binding

extracellular region

extracellular region

endoplasmic reticulum lumen

lipid metabolic process

phosphatidylcholine biosynthetic process

lipid transport

G-protein coupled receptor protein signaling pathway

steroid metabolic process

cholesterol metabolic process

positive regulation of cholesterol esterification

negative regulation of very-low-density lipoprotein particle remodeling

cholesterol binding

cholesterol transporter activity

cholesterol transporter activity

enzyme binding

endocytic vesicle

cytoplasmic vesicle

Cdc42 protein signal transduction

cholesterol efflux

phospholipid efflux

apolipoprotein A-I receptor binding

very-low-density lipoprotein particle

spherical high-density lipoprotein particle

high-density lipoprotein particle assembly

high-density lipoprotein particle clearance

lipoprotein metabolic process

cholesterol homeostasis

identical protein binding

reverse cholesterol transport

negative regulation of interleukin-1 beta secretion

protein stabilization

positive regulation of hydrolase activity

phosphatidylcholine-sterol O-acyltransferase activator activity

cholesterol import

high-density lipoprotein receptor binding

PPAR signaling pathway

238448_at 0.220 2.945 2.304 3.572e-02 0.281 -3.871 MRPL19 mitochondrial ribosomal protein L19 2 75727416 BE544070 2q11.1-q11.2 Hs.44024 11

structural constituent of ribosome

intracellular

nucleus

mitochondrion

ribosome

translation

nuclear membrane

 
208208_at -0.164 5.684 -2.304 3.572e-02 0.281 -3.871 MYH13 myosin, heavy chain 13, skeletal muscle 17 -10144907 NM_003802 17p13 Hs.711142 8

microfilament motor activity

nucleotide binding

actin binding

calmodulin binding

ATP binding

cytoplasm

striated muscle thick filament

striated muscle contraction

myosin complex

myofibril

Tight junction

1561579_at 0.223 4.195 2.304 3.573e-02 0.281 -3.872 LOC728445 hypothetical protein LOC728445 8   AI240136 8p11.21 Hs.713375      
1556204_a_at 0.352 4.241 2.304 3.574e-02 0.281 -3.872 ZNF814 zinc finger protein 814 19 -63072558 AK096401 19q13.43 Hs.634143 Hs.669024 Hs.719319 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
221667_s_at -0.401 11.262 -2.304 3.574e-02 0.281 -3.872 HSPB8 heat shock 22kDa protein 8 12 118100977 AF133207 12q24.23 Hs.400095 48

protein serine/threonine kinase activity

cellular_component

intracellular

biological_process

cell death

response to heat

identical protein binding

 
1553051_s_at 0.189 4.231 2.304 3.574e-02 0.281 -3.872 ODF3 outer dense fiber of sperm tails 3 11 186760 NM_053280 11p15.5 Hs.350949 2

outer dense fiber

cytoplasm

multicellular organismal development

spermatogenesis

cell differentiation

 
225292_at 0.347 5.916 2.304 3.576e-02 0.281 -3.872 COL27A1 collagen, type XXVII, alpha 1 9 115958051 AU145229 9q32 Hs.494892 8

extracellular matrix structural constituent

extracellular region

collagen

cell adhesion

 
233356_at 0.347 4.637 2.304 3.576e-02 0.281 -3.872 EEF1DP3 eukaryotic translation elongation factor 1 delta pseudogene 3 13 31318919 U50525 13q13.1 Hs.507667 3    
244413_at 0.184 3.652 2.304 3.576e-02 0.281 -3.872 CLECL1 C-type lectin-like 1 12 -9766357 AW237307 12p13.31 Hs.560087 3

binding

sugar binding

plasma membrane

integral to membrane

 
232313_at 0.236 3.693 2.303 3.580e-02 0.281 -3.873 TMEM132C transmembrane protein 132C 12 127465243 AL122107 12q24.32 Hs.49599  

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
238116_at 0.182 2.408 2.303 3.581e-02 0.281 -3.874 DYNLRB2 dynein, light chain, roadblock-type 2 16 79132354 AW959427 16q23.3 Hs.98849 5

microtubule motor activity

protein binding

cytoplasm

cytoplasmic dynein complex

microtubule

microtubule-based movement

 
206806_at 0.171 3.698 2.303 3.582e-02 0.281 -3.874 DGKI diacylglycerol kinase, iota 7 -136724924 NM_004717 7q32.3-q33 Hs.242947 6

nucleotide binding

diacylglycerol kinase activity

protein binding

ATP binding

nucleus

cytoplasm

activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway

intracellular signaling cascade

zinc ion binding

transferase activity

metal ion binding

Glycerolipid metabolism

Glycerophospholipid metabolism

Metabolic pathways

Phosphatidylinositol signaling system

218736_s_at -0.366 8.679 -2.303 3.583e-02 0.281 -3.874 PALMD palmdelphin 1 99884018 NM_017734 1p22-p21 Hs.483993 7

cytoplasm

regulation of cell shape

membrane

 
205145_s_at 0.776 5.996 2.302 3.583e-02 0.281 -3.874 MYL5 myosin, light chain 5, regulatory 4 661710 NM_002477 4p16.3 Hs.410970 4

motor activity

calcium ion binding

muscle myosin complex

regulation of muscle contraction

structural constituent of muscle

myosin complex

Focal adhesion

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

231017_at -0.428 7.174 -2.302 3.585e-02 0.281 -3.874 STK11 serine/threonine kinase 11 19 1156797 AI914604 19p13.3 Hs.515005 129

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

cell cycle

cell cycle arrest

negative regulation of cell proliferation

transferase activity

manganese ion binding

mTOR signaling pathway

Adipocytokine signaling pathway

236696_at -0.426 4.899 -2.302 3.585e-02 0.281 -3.875 SR140 U2-associated SR140 protein 3 144203061 BE464843 3q23 Hs.596572 4

nucleotide binding

RNA binding

RNA processing

 
209919_x_at 0.221 5.464 2.302 3.586e-02 0.281 -3.875 GGT1 gamma-glutamyltransferase 1 22 23309717, 23329179, 23333654 L20490 22q11.23 Hs.595809 Hs.645535 71

molecular_function

gamma-glutamyltransferase activity

protein binding

cellular amino acid metabolic process

glutathione biosynthetic process

acyltransferase activity

membrane

integral to membrane

transferase activity

Taurine and hypotaurine metabolism

Selenoamino acid metabolism

Cyanoamino acid metabolism

Glutathione metabolism

Arachidonic acid metabolism

Metabolic pathways

202232_s_at -0.220 9.085 -2.302 3.586e-02 0.281 -3.875 EIF3M eukaryotic translation initiation factor 3, subunit M 11 32561966 NM_006360 11p13 Hs.502244 13

translation initiation factor activity

protein binding

cytoplasm

eukaryotic translation initiation factor 3 complex

translational initiation

 
221955_at 0.338 5.423 2.302 3.586e-02 0.281 -3.875 GNA11 guanine nucleotide binding protein (G protein), alpha 11 (Gq class) 19 3045407 AI040021 19p13.3 Hs.650575 Hs.654784 44

nucleotide binding

skeletal system development

regulation of action potential

GTPase activity

signal transducer activity

GTP binding

cytoplasm

plasma membrane

protein amino acid ADP-ribosylation

signal transduction

G-protein coupled receptor protein signaling pathway

heart development

guanyl nucleotide binding

regulation of melanocyte differentiation

pigmentation during development

activation of phospholipase C activity by dopamine receptor signaling pathway

Calcium signaling pathway

Vascular smooth muscle contraction

Gap junction

Long-term depression

GnRH signaling pathway

1555741_at 0.218 3.722 2.302 3.587e-02 0.281 -3.875 MRAP melanocortin 2 receptor accessory protein 21 32585994, 32585994 AF483549 21q22.1 Hs.584940 12

cytoplasm

endoplasmic reticulum

plasma membrane

integral to membrane

perinuclear region of cytoplasm

 
226621_at 0.326 5.909 2.302 3.590e-02 0.281 -3.876 FGG fibrinogen gamma chain 4 -155745177, -155744735 AI133452 4q28 Hs.546255 157

receptor binding

calcium ion binding

extracellular region

extracellular region

fibrinogen complex

plasma membrane

signal transduction

external side of plasma membrane

platelet activation

protein binding, bridging

platelet alpha granule lumen

eukaryotic cell surface binding

protein polymerization

response to calcium ion

Complement and coagulation cascades

234989_at -0.350 11.936 -2.301 3.590e-02 0.281 -3.876 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 11 64946844, 64946844 AV699657 11q13.1 Hs.523789 Hs.648467 6    
203481_at -0.524 6.363 -2.301 3.591e-02 0.281 -3.876 FAM178A family with sequence similarity 178, member A 10 102662315, 102662315, 102662315 AI655902 10q24.31 Hs.447458 5    
209860_s_at -0.337 9.710 -2.301 3.593e-02 0.282 -3.876 ANXA7 annexin A7 10 -74805194 J04543 10q21.1-q21.2 Hs.631827 24

calcium ion binding

calcium-dependent phospholipid binding

calcium-dependent protein binding

 
225625_at 0.331 6.006 2.301 3.594e-02 0.282 -3.877 ALKBH2 alkB, alkylation repair homolog 2 (E. coli) 12 -108010375 AI865555 12q24.11 Hs.374458 11

damaged DNA binding

iron ion binding

nucleus

nucleoplasm

DNA repair

response to DNA damage stimulus

2-oxoglutarate-dependent dioxygenase activity

oxidoreductase activity

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

metal ion binding

DNA demethylase activity

oxidation reduction

 
221656_s_at -0.258 7.920 -2.301 3.595e-02 0.282 -3.877 ARHGEF10L Rho guanine nucleotide exchange factor (GEF) 10-like 1 17738916, 17779634 BC003073 1p36.13 Hs.443460 5

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

intracellular

cytoplasm

regulation of Rho protein signal transduction

 
225903_at -0.298 6.337 -2.301 3.596e-02 0.282 -3.877 PIGU phosphatidylinositol glycan anchor biosynthesis, class U 20 -32612006 AL118520 20q11.22 Hs.253319 11

GPI-anchor transamidase activity

endoplasmic reticulum

endoplasmic reticulum membrane

plasma membrane

integral to membrane

attachment of GPI anchor to protein

attachment of GPI anchor to protein

GPI anchor binding

GPI-anchor transamidase complex

regulation of JAK-STAT cascade

Glycosylphosphatidylinositol(GPI)-anchor biosynthesis

Metabolic pathways

225093_at 0.310 7.537 2.300 3.599e-02 0.282 -3.878 UTRN utrophin 6 144654565 N66570 6q24 Hs.133135 51

actin binding

calcium ion binding

protein binding

membrane fraction

cytoplasm

cytoskeleton

plasma membrane

muscle contraction

muscle organ development

zinc ion binding

cell junction

synapse

postsynaptic membrane

 
219662_at -0.388 6.611 -2.300 3.601e-02 0.282 -3.878 C2orf49 chromosome 2 open reading frame 49 2 105320444 NM_024093 2q12.1 Hs.549577 4

molecular_function

cellular_component

biological_process

 
205787_x_at -0.218 5.145 -2.300 3.601e-02 0.282 -3.879 ZC3H11A zinc finger CCCH-type containing 11A 1 202031373 AI803216 1q32.1 Hs.532399 13

nucleic acid binding

protein binding

zinc ion binding

metal ion binding

 
202935_s_at -0.499 4.532 -2.300 3.604e-02 0.282 -3.879 SOX9 SRY (sex determining region Y)-box 9 17 67628755 AI382146 17q24.3-q25.1 Hs.647409 90

cartilage condensation

cell fate specification

epithelial to mesenchymal transition

hair follicle development

transcription factor activity

specific RNA polymerase II transcription factor activity

protein binding

nucleus

nucleolus

heart development

male gonad development

neural crest cell development

transcription activator activity

male germ-line sex determination

negative regulation of bone mineralization

negative regulation of chondrocyte differentiation

regulation of cell proliferation

regulation of apoptosis

sequence-specific DNA binding

regulation of transcription

negative regulation of transcription, DNA-dependent

positive regulation of transcription from RNA polymerase II promoter

endochondral bone morphogenesis

 
222422_s_at -0.265 7.071 -2.299 3.605e-02 0.282 -3.879 NDFIP1 Nedd4 family interacting protein 1 5 141468507 AW167859 5q31.3 Hs.653510 Hs.9788 11

signal transducer activity

protein binding

Golgi apparatus

cellular iron ion homeostasis

negative regulation of gene expression

membrane

integral to membrane

positive regulation of protein ubiquitination

negative regulation of transporter activity

positive regulation of I-kappaB kinase/NF-kappaB cascade

perinuclear region of cytoplasm

negative regulation of protein transport

 
202424_at -0.294 8.077 -2.299 3.606e-02 0.282 -3.880 MAP2K2 mitogen-activated protein kinase kinase 2 19 -4041319 NM_030662 19p13.3 Hs.465627 98

nucleotide binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

extracellular region

protein amino acid phosphorylation

Ras protein signal transduction

transferase activity

MAPK signaling pathway

ErbB signaling pathway

Vascular smooth muscle contraction

VEGF signaling pathway

Gap junction

Toll-like receptor signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Long-term potentiation

Neurotrophin signaling pathway

Long-term depression

Regulation of actin cytoskeleton

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Prion diseases

Pathways in cancer

Renal cell carcinoma

Endometrial cancer

Glioma

Prostate cancer

Thyroid cancer

Melanoma

Bladder cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Non-small cell lung cancer

216961_s_at 0.234 4.867 2.299 3.609e-02 0.282 -3.881 RPAIN RPA interacting protein 17 5263684, 5263684 M69039 17p13.2 Hs.462086 Hs.555866 Hs.667574 9

nucleus

cytoplasm

DNA-dependent DNA replication

DNA repair

DNA recombination

protein import into nucleus

zinc ion binding

response to UV

PML body

protein complex binding

metal ion binding

 
223714_at 0.838 3.816 2.298 3.612e-02 0.282 -3.881 ZNF256 zinc finger protein 256 19 -63144012 BC001438 19q13.43 Hs.596242 5

transcription factor activity

protein binding

intracellular

nucleus

multicellular organismal development

zinc ion binding

general transcriptional repressor activity

regulation of transcription

metal ion binding

 
1561334_at -0.212 4.519 -2.298 3.612e-02 0.282 -3.881 LOC285181 hypothetical protein LOC285181 2   AA002166 2q36.1 Hs.434525 1    
209681_at -0.904 8.790 -2.298 3.613e-02 0.282 -3.881 SLC19A2 solute carrier family 19 (thiamine transporter), member 2 1 -167699772 AF153330 1q23.3 Hs.30246 32

folic acid binding

cytoplasm

plasma membrane

transport

folic acid transporter activity

reduced folate carrier activity

thiamin transmembrane transporter activity

thiamin transport

integral to membrane

thiamin and derivative metabolic process

 
203881_s_at -0.323 10.140 -2.298 3.613e-02 0.282 -3.881 DMD dystrophin X -31106232, -31047265, -31047265, -31047265, -31047265, -31047265, -31047265, -31047265, -31047265, -31047265 NM_004010 Xp21.2 Hs.495912 240

actin binding

structural constituent of cytoskeleton

calcium ion binding

protein binding

cytoplasm

cytoskeleton

muscle organ development

zinc ion binding

structural constituent of muscle

structural constituent of muscle

cell surface

dystrophin-associated glycoprotein complex

sarcolemma

costamere

peptide biosynthetic process

nitric-oxide synthase binding

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

220550_at -0.188 2.127 -2.298 3.615e-02 0.283 -3.882 FBXO4 F-box protein 4 5 41961112, 41961112 NM_018007 5p12 Hs.165575 14

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

protein ubiquitination

modification-dependent protein catabolic process

Ubiquitin mediated proteolysis

223532_at 0.264 5.944 2.298 3.617e-02 0.283 -3.882 ANKRD39 ankyrin repeat domain 39 2 -96877450 AF151034 2q11.2 Hs.709507 6    
217677_at 0.204 3.047 2.298 3.617e-02 0.283 -3.882 PLEKHA2 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 8 38877909 BF542055 8p11.22 Hs.369123 4

phospholipid binding

phosphatidylinositol binding

cellular_component

nucleus

cytoplasm

plasma membrane

biological_process

 
214066_x_at 0.237 5.542 2.298 3.617e-02 0.283 -3.882 NPR2 natriuretic peptide receptor B/guanylate cyclase B (atrionatriuretic peptide receptor B) 9 35782405 AA565715 9p21-p12 Hs.78518 34

nucleotide binding

guanylate cyclase activity

protein kinase activity

transmembrane receptor activity

ATP binding

GTP binding

plasma membrane

cGMP biosynthetic process

protein amino acid phosphorylation

cell surface receptor linked signal transduction

intracellular signaling cascade

regulation of blood pressure

peptide receptor activity, G-protein coupled

integral to membrane

Purine metabolism

Vascular smooth muscle contraction

225064_at -0.548 7.984 -2.298 3.618e-02 0.283 -3.883 RABEP1 rabaptin, RAB GTPase binding effector protein 1 17 5126281 R60018 17p13.2 Hs.584784 Hs.592121 19

GTPase activator activity

protein binding

cytoplasm

early endosome

endocytosis

apoptosis

membrane fusion

growth factor activity

protein transport

recycling endosome

Endocytosis

218029_at 0.195 6.302 2.297 3.619e-02 0.283 -3.883 FAM65A family with sequence similarity 65, member A 16 66120254 NM_024519 16q22.1 Hs.152717 5

binding

 
223319_at -0.269 7.040 -2.297 3.621e-02 0.283 -3.883 GPHN gephyrin 14 66043877 AF272663 14q23.3 Hs.208765 29

nucleotide binding

magnesium ion binding

catalytic activity

protein binding

intracellular

cytoplasm

cytoskeleton

plasma membrane

Mo-molybdopterin cofactor biosynthetic process

establishment of synaptic specificity at neuromuscular junction

cell junction

synapse

postsynaptic membrane

 
211804_s_at 0.202 3.475 2.297 3.622e-02 0.283 -3.884 CDK2 cyclin-dependent kinase 2 12 54646822 AB012305 12q13 Hs.19192 Hs.689624 306

G2/M transition of mitotic cell cycle

nucleotide binding

cyclin-dependent protein kinase holoenzyme complex

cyclin-dependent protein kinase activity

cyclin-dependent protein kinase activity

ATP binding

nucleus

nucleoplasm

cytoplasm

cytosol

regulation of DNA replication

protein amino acid phosphorylation

cell cycle

mitosis

traversing start control point of mitotic cell cycle

positive regulation of cell proliferation

transferase activity

histone kinase activity

identical protein binding

cell division

Cell cycle

p53 signaling pathway

Pathways in cancer

Prostate cancer

Small cell lung cancer

209574_s_at -0.593 5.782 -2.297 3.624e-02 0.283 -3.884 C18orf1 chromosome 18 open reading frame 1 18 13208785, 13601664, 13610866 AI349506 18p11.2 Hs.149363 9

molecular_function

plasma membrane

biological_process

integral to membrane

 
215945_s_at 0.198 5.131 2.297 3.624e-02 0.283 -3.884 TRIM2 tripartite motif-containing 2 4 154293719, 154345047 BC005016 4q31.3 Hs.435711 6

protein binding

intracellular

cytoplasm

biological_process

zinc ion binding

metal ion binding

 
202387_at 0.300 9.456 2.297 3.624e-02 0.283 -3.884 BAG1 BCL2-associated athanogene 9 -33242469 NM_004323 9p12 Hs.377484 78

receptor signaling protein activity

protein binding

nucleus

cytoplasm

cytoskeleton

apoptosis

anti-apoptosis

cell surface receptor linked signal transduction

 
240592_at -0.353 7.375 -2.297 3.625e-02 0.283 -3.884 LCORL ligand dependent nuclear receptor corepressor-like 4 -17453941 AI939336 4p15.31 Hs.446201 Hs.661849 Hs.677572 9

DNA binding

RNA polymerase II transcription factor activity

nucleus

transcription from RNA polymerase II promoter

regulation of transcription

 
1553640_at -0.184 5.082 -2.297 3.625e-02 0.283 -3.884 XKR6 XK, Kell blood group complex subunit-related family, member 6 8 -10791066 NM_173683 8p23.1 Hs.657083 Hs.666146 6

membrane

integral to membrane

 
218574_s_at 0.298 10.510 2.296 3.627e-02 0.283 -3.885 LMCD1 LIM and cysteine-rich domains 1 3 8518510 NM_014583 3p26-p24 Hs.475353 4

negative regulation of transcription from RNA polymerase II promoter

molecular_function

transcription corepressor activity

protein binding

cellular_component

nucleus

biological_process

zinc ion binding

metal ion binding

 
219102_at 0.160 5.353 2.296 3.627e-02 0.283 -3.885 RCN3 reticulocalbin 3, EF-hand calcium binding domain 19 54722686 NM_020650 19q13.33 Hs.567550 6

calcium ion binding

protein binding

endoplasmic reticulum

endoplasmic reticulum lumen

 
239265_at 0.418 4.832 2.296 3.628e-02 0.283 -3.885 TMEM20 transmembrane protein 20 10 95643719 R56424 10q23.33 Hs.632085 4

membrane

integral to membrane

 
227132_at -0.208 5.895 -2.296 3.629e-02 0.283 -3.885 ZNF706 zinc finger protein 706 8 -102278441, -102278441 N38730 8q22.3 Hs.374485 4

intracellular

zinc ion binding

metal ion binding

 
213111_at -0.353 6.482 -2.295 3.632e-02 0.283 -3.886 PIKFYVE phosphoinositide kinase, FYVE finger containing 2 208839235, 208839235 AB023198 2q34 Hs.173939 25

nucleotide binding

protein binding

ATP binding

endosome

receptor-mediated endocytosis

intracellular signaling cascade

zinc ion binding

membrane

kinase activity

1-phosphatidylinositol-4-phosphate 5-kinase activity

transferase activity

early endosome membrane

protein localization in nucleus

retrograde transport, endosome to Golgi

cellular protein metabolic process

membrane raft

phosphatidylinositol metabolic process

metal ion binding

Inositol phosphate metabolism

Metabolic pathways

Phosphatidylinositol signaling system

Endocytosis

Fc gamma R-mediated phagocytosis

Regulation of actin cytoskeleton

243841_at -0.227 4.270 -2.295 3.633e-02 0.283 -3.886 SYNE2 spectrin repeat containing, nuclear envelope 2 14 63389435, 63750611, 63752424 BE673396 14q23.2 Hs.525392 24

actin binding

nucleus

cytoplasm

cytoskeleton

membrane

integral to membrane

nuclear membrane

 
1729_at 0.189 6.190 2.295 3.636e-02 0.283 -3.887 TRADD TNFRSF1A-associated via death domain 16 -65745589 L41690 16q22 Hs.460996 68

signal transducer activity

cytoplasm

cytosol

cytoskeleton

induction of apoptosis

signal transduction

activation of pro-apoptotic gene products

intermediate filament binding

kinase binding

tumor necrosis factor-mediated signaling pathway

identical protein binding

positive regulation of I-kappaB kinase/NF-kappaB cascade

receptor complex

positive regulation of hair follicle development

molecular adaptor activity

death domain binding

Apoptosis

RIG-I-like receptor signaling pathway

Adipocytokine signaling pathway

206246_at 0.166 5.527 2.295 3.637e-02 0.283 -3.887 PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 3 -48530120 NM_004567 3p22-p21 Hs.476217 8

nucleotide binding

6-phosphofructo-2-kinase activity

6-phosphofructo-2-kinase activity

fructose-2,6-bisphosphate 2-phosphatase activity

ATP binding

cellular_component

cytosol

fructose 2,6-bisphosphate metabolic process

metabolic process

kinase activity

transferase activity

hydrolase activity

Fructose and mannose metabolism

204975_at 0.294 7.736 2.295 3.637e-02 0.283 -3.887 EMP2 epithelial membrane protein 2 16 -10529780 NM_001424 16p13.2 Hs.531561 17

cell proliferation

membrane

integral to membrane

 
1569069_s_at -0.289 6.322 -2.295 3.637e-02 0.283 -3.887 TDRD3 tudor domain containing 3 13 59868591, 59869427 BC020604 13q21.2 Hs.525061 12

nucleic acid binding

nucleus

cytoplasm

 
206070_s_at 0.608 3.534 2.295 3.637e-02 0.283 -3.887 EPHA3 EPH receptor A3 3 89239363, 89239363 AF213459 3p11.2 Hs.123642 35

nucleotide binding

receptor activity

ephrin receptor activity

ATP binding

extracellular region

plasma membrane

integral to plasma membrane

protein amino acid phosphorylation

signal transduction

transmembrane receptor protein tyrosine kinase signaling pathway

transferase activity

Axon guidance

204404_at -0.525 5.974 -2.295 3.639e-02 0.283 -3.888 SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporters), member 2 5 127447381 NM_001046 5q23.3 Hs.162585 Hs.712970 29

transporter activity

membrane fraction

integral to plasma membrane

ion transport

potassium ion transport

sodium ion transport

sodium:potassium:chloride symporter activity

symporter activity

membrane

transepithelial chloride transport

potassium ion binding

sodium ion binding

ammonia transporter activity

transepithelial ammonium transport

Vibrio cholerae infection

1567272_at 0.185 4.037 2.295 3.639e-02 0.283 -3.888 OR2K2 olfactory receptor, family 2, subfamily K, member 2 9 -113129583 X64977 9q31.3 Hs.381312 6

receptor activity

olfactory receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

sensory perception of smell

integral to membrane

response to stimulus

Olfactory transduction

226053_at -0.328 6.727 -2.295 3.639e-02 0.283 -3.888 MAP2K7 mitogen-activated protein kinase kinase 7 19 7874764 AI090153 19p13.3-p13.2 Hs.531754 46

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

MAP kinase kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

response to stress

signal transduction

transferase activity

protein kinase binding

stress-activated MAPK cascade

MAPK signaling pathway

ErbB signaling pathway

Toll-like receptor signaling pathway

T cell receptor signaling pathway

Fc epsilon RI signaling pathway

Neurotrophin signaling pathway

GnRH signaling pathway

1555719_a_at 0.331 3.147 2.295 3.639e-02 0.283 -3.888 C3orf15 chromosome 3 open reading frame 15 3 120904558 AB063298 3q12-q13.3 Hs.341906 8

protein binding

cytoplasm

mitochondrion

 
232269_x_at -0.236 6.918 -2.294 3.639e-02 0.283 -3.888 METRN meteorin, glial cell differentiation regulator 16 705173 BE965311 16p13.3 Hs.533772 6

extracellular region

extracellular space

multicellular organismal development

nervous system development

glial cell differentiation

positive regulation of axonogenesis

 
201977_s_at 0.362 6.830 2.294 3.640e-02 0.283 -3.888 KIAA0141 KIAA0141 5 141283568 AI539425 5q31.3 Hs.210532 6

binding

mitochondrion

 
205174_s_at 0.938 4.526 2.294 3.640e-02 0.283 -3.888 QPCT glutaminyl-peptide cyclotransferase 2 37425256 NM_012413 2p22.2 Hs.79033 15

protein modification process

proteolysis

peptidase activity

zinc ion binding

acyltransferase activity

glutaminyl-peptide cyclotransferase activity

transferase activity

metal ion binding

 
220449_at 0.174 5.908 2.294 3.642e-02 0.283 -3.889 MGC5566 hypothetical protein MGC5566 20   NM_024049 20q13.12 Hs.255479 1    
210270_at 0.274 4.929 2.294 3.642e-02 0.283 -3.889 RGS6 regulator of G-protein signaling 6 14 71469538 AF156932 14q24.3 Hs.509872 13

signal transducer activity

GTPase activator activity

cellular_component

cytoplasm

heterotrimeric G-protein complex

intracellular signaling cascade

regulation of G-protein coupled receptor protein signaling pathway

negative regulation of signal transduction

membrane

 
229266_at 0.289 3.200 2.294 3.644e-02 0.283 -3.889 LOC284033 hypothetical LOC284033 17   AI138603 17p12 Hs.592124 2    
202539_s_at -0.367 5.336 -2.293 3.647e-02 0.283 -3.890 HMGCR 3-hydroxy-3-methylglutaryl-Coenzyme A reductase 5 74668748 AL518627 5q13.3-q14 Hs.643495 Hs.698445 Hs.713530 72

hydroxymethylglutaryl-CoA reductase (NADPH) activity

peroxisome

endoplasmic reticulum

endoplasmic reticulum membrane

endoplasmic reticulum membrane

cholesterol biosynthetic process

isoprenoid biosynthetic process

germ cell migration

gonad development

coenzyme A metabolic process

membrane

integral to membrane

oxidoreductase activity

NADP or NADPH binding

oxidation reduction

Terpenoid backbone biosynthesis

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

216267_s_at -0.193 5.867 -2.293 3.648e-02 0.283 -3.890 TMEM115 transmembrane protein 115 3 -50367183 BF034906 3p21.3 Hs.91566 6

molecular_function

nucleus

Golgi apparatus

negative regulation of cell proliferation

membrane

integral to membrane

 
210361_s_at -0.277 6.019 -2.293 3.649e-02 0.283 -3.890 ELF2 E74-like factor 2 (ets domain transcription factor) 4 -140198320, -140198320 AF256223 4q28 Hs.634040 13

transcription factor activity

protein binding

nucleus

cytoplasm

regulation of transcription from RNA polymerase II promoter

transcription activator activity

sequence-specific DNA binding

 
213799_s_at 0.242 4.622 2.293 3.650e-02 0.283 -3.890 PTPRA protein tyrosine phosphatase, receptor type, A 20 2792840, 2802141, 2851852 BF740139 20p13 Hs.269577 58

transmembrane receptor protein tyrosine phosphatase activity

integral to plasma membrane

protein amino acid phosphorylation

protein amino acid dephosphorylation

membrane

hydrolase activity

 
219518_s_at -0.412 4.389 -2.293 3.650e-02 0.283 -3.891 ELL3 elongation factor RNA polymerase II-like 3 15 -41852089 NM_025165 15q15.3 Hs.706346 5

protein binding

nucleus

RNA elongation from RNA polymerase II promoter

spermatogenesis

transcription elongation factor complex

positive transcription elongation factor activity

RNA polymerase II transcription elongation factor activity

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter, global

 
205888_s_at 0.153 3.100 2.293 3.651e-02 0.283 -3.891 JAKMIP2 janus kinase and microtubule interacting protein 2 5 -146950898 AI962693 5q32 Hs.719177 7

Golgi apparatus

 
206480_at 0.191 4.726 2.293 3.651e-02 0.283 -3.891 LTC4S leukotriene C4 synthase 5 179153591 NM_000897 5q35 Hs.706741 69

leukotriene-C4 synthase activity

protein binding

nucleus

nuclear envelope

endoplasmic reticulum

microsome

enzyme activator activity

lipid binding

membrane

integral to membrane

lyase activity

leukotriene biosynthetic process

Arachidonic acid metabolism

Metabolic pathways

234292_s_at 0.234 5.204 2.292 3.657e-02 0.284 -3.892 ZNF167 zinc finger protein 167 3 44571716, 44571716 AK022800 3p22.3-p21.1 Hs.529512 Hs.696570 7

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
210427_x_at 0.495 9.499 2.292 3.657e-02 0.284 -3.892 ANXA2 annexin A2 15 -58426642, -58426641 BC001388 15q21-q22 Hs.511605 137

skeletal system development

angiogenesis

phospholipase inhibitor activity

calcium ion binding

calcium-dependent phospholipid binding

phosphatidylinositol-4,5-bisphosphate binding

extracellular region

basement membrane

soluble fraction

cytoplasm

early endosome

cytoskeletal protein binding

collagen fibril organization

sarcolemma

melanosome

fibrinolysis

protein complex

perinuclear region of cytoplasm

 
224534_at -0.474 3.620 -2.292 3.658e-02 0.284 -3.892 KREMEN1 kringle containing transmembrane protein 1 22 27799065, 27799105 AB059618 22q12.1 Hs.229335 11

molecular_function

membrane fraction

cell communication

membrane

integral to membrane

Wnt receptor signaling pathway

 
238153_at 0.182 4.899 2.292 3.659e-02 0.284 -3.893 PDE6B phosphodiesterase 6B, cGMP-specific, rod, beta 4 609362, 636965 AW451980 4p16.3 Hs.623810 Hs.654544 30

signal transduction

visual perception

phototransduction, visible light

detection of light stimulus

membrane

hydrolase activity

3',5'-cyclic-GMP phosphodiesterase activity

response to stimulus

 
202779_s_at -0.530 5.832 -2.292 3.660e-02 0.284 -3.893 UBE2S ubiquitin-conjugating enzyme E2S 19 -60604461 NM_014501 19q13.43 Hs.396393 6

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

227484_at 0.228 3.851 2.292 3.660e-02 0.284 -3.893 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 12 62524807 BF508615 12q14.2 Hs.210751 Hs.593803 8

GTPase activator activity

intracellular

signal transduction

Axon guidance

210216_x_at -0.243 7.457 -2.291 3.661e-02 0.284 -3.893 RAD1 RAD1 homolog (S. pombe) 5 -34941124, -34941122 AF084513 5p13.2 Hs.38114 44

cell cycle checkpoint

DNA damage checkpoint

damaged DNA binding

protein binding

nucleus

DNA replication

DNA repair

response to DNA damage stimulus

meiotic prophase I

3'-5' exonuclease activity

3'-5' exonuclease activity

exodeoxyribonuclease III activity

hydrolase activity

 
227990_at -0.442 7.637 -2.291 3.664e-02 0.284 -3.894 SLU7 SLU7 splicing factor homolog (S. cerevisiae) 5 -159761225 AA843238 5q33.3 Hs.435342 9

alternative nuclear mRNA splicing, via spliceosome

second spliceosomal transesterification activity

nuclear mRNA 3'-splice site recognition

nucleic acid binding

nucleus

spliceosomal complex

cytoplasm

mRNA processing

zinc ion binding

RNA splicing

nuclear speck

small nuclear ribonucleoprotein complex

pre-mRNA 3'-splice site binding

metal ion binding

 
204894_s_at 0.583 5.962 2.291 3.667e-02 0.284 -3.895 AOC3 amine oxidase, copper containing 3 (vascular adhesion protein 1) 17 38256726 NM_003734 17q21 Hs.198241 39

copper ion binding

calcium ion binding

protein binding

plasma membrane

inflammatory response

cell adhesion

amine oxidase activity

amine metabolic process

amine metabolic process

cell surface

integral to membrane

oxidoreductase activity

protein homodimerization activity

quinone binding

oxidation reduction

Glycine, serine and threonine metabolism

Tyrosine metabolism

Phenylalanine metabolism

beta-Alanine metabolism

Isoquinoline alkaloid biosynthesis

Tropane, piperidine and pyridine alkaloid biosynthesis

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Metabolic pathways

204829_s_at 0.272 6.447 2.290 3.669e-02 0.284 -3.895 FOLR2 folate receptor 2 (fetal) 11 71605466 NM_000803 11q13.3-q13.5 Hs.433159 24

receptor activity

folic acid binding

extracellular region

membrane fraction

plasma membrane

folic acid transport

anchored to membrane

 
213201_s_at 0.272 13.412 2.290 3.669e-02 0.284 -3.895 TNNT1 troponin T type 1 (skeletal, slow) 19 -60335972 AJ011712 19q13.4 Hs.631558 29

skeletal muscle contraction

protein binding

tropomyosin binding

troponin complex

troponin complex

negative regulation of muscle contraction

 
235521_at 0.310 6.453 2.290 3.669e-02 0.284 -3.895 HOXA3 homeobox A3 7 -27112333, -27112333, -27112333 AW137982 7p15-p14 Hs.659337 18

blood vessel remodeling

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

positive regulation of cell proliferation

anterior/posterior pattern formation

specification of organ position

glossopharyngeal nerve morphogenesis

thyroid gland development

sequence-specific DNA binding

thymus development

organ formation

embryonic skeletal system morphogenesis

cartilage development

parathyroid gland development

 
208927_at -0.322 8.448 -2.290 3.672e-02 0.284 -3.896 SPOP speckle-type POZ protein 17 -45031244 BF673888 17q21.33 Hs.463382 Hs.718421 27

protein binding

nucleus

mRNA processing

modification-dependent protein catabolic process

 
204385_at -0.189 5.143 -2.289 3.676e-02 0.284 -3.897 KYNU kynureninase (L-kynurenine hydrolase) 2 143351664, 143351664 NM_003937 2q22.2 Hs.470126 11

soluble fraction

cytoplasm

mitochondrion

cytosol

cytosol

tryptophan catabolic process

metabolic process

NAD biosynthetic process

hydrolase activity

pyridine nucleotide biosynthetic process

quinolinate biosynthetic process

pyridoxal phosphate binding

kynureninase activity

kynureninase activity

kynureninase activity

response to interferon-gamma

response to vitamin B6

protein homodimerization activity

anthranilate metabolic process

Tryptophan metabolism

Metabolic pathways

1559201_a_at 0.207 5.077 2.289 3.676e-02 0.284 -3.897 OSTF1 osteoclast stimulating factor 1 9 76893217 BU929456 9q13-q21.2 Hs.494192 17

ossification

intracellular

cytoplasm

signal transduction

identical protein binding

 
244506_at 0.242 4.749 2.289 3.677e-02 0.284 -3.897 TMTC1 transmembrane and tetratricopeptide repeat containing 1 12 -29545023 BE297946 12p11.22 Hs.401954 3

binding

membrane

integral to membrane

 
219398_at 0.425 5.793 2.289 3.682e-02 0.284 -3.898 CIDEC cell death-inducing DFFA-like effector c 3 -9883397 NM_022094 3p25.3 Hs.567562 Hs.635072 6

molecular_function

protein binding

intracellular

cytoplasm

cytosol

apoptosis

induction of apoptosis

 
1554672_at -0.254 3.467 -2.288 3.682e-02 0.284 -3.898 TTC26 tetratricopeptide repeat domain 26 7 138469029 BC013912 7q34 Hs.644553 3    
223235_s_at 0.578 8.220 2.288 3.682e-02 0.284 -3.898 SMOC2 SPARC related modular calcium binding 2 6 168584879 AB014737 6q27 Hs.487200 8

calcium ion binding

extracellular region

basement membrane

signal transduction

 
222412_s_at -0.481 7.289 -2.288 3.682e-02 0.284 -3.898 SSR3 signal sequence receptor, gamma (translocon-associated protein gamma) 3 -157741236 AW150923 3q25.31 Hs.518346 7

signal sequence binding

protein binding

endoplasmic reticulum

translocon complex

microsome

cotranslational protein targeting to membrane

membrane

integral to membrane

integral to endoplasmic reticulum membrane

 
211845_at 0.248 5.252 2.288 3.684e-02 0.284 -3.899 PVRL1 poliovirus receptor-related 1 (herpesvirus entry mediator C) 11 -119050308, -119036912, -119014017 AF110314 11q23.3 Hs.334846 42

extracellular region

plasma membrane

cell-cell adherens junction

immune response

homophilic cell adhesion

heterophilic cell adhesion

coreceptor activity

integral to membrane

protein homodimerization activity

interspecies interaction between organisms

entry of virus into host cell

cell adhesion molecule binding

Cell adhesion molecules (CAMs)

Adherens junction

1568629_s_at 0.230 7.774 2.288 3.684e-02 0.284 -3.899 PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 19 18125015 BC033311 19q13.2-q13.4 Hs.371344 68

protein binding

intracellular

cytosol

phosphoinositide 3-kinase complex

signal transduction

1-phosphatidylinositol-3-kinase activity

negative regulation of anti-apoptosis

phosphoinositide 3-kinase regulator activity

ErbB signaling pathway

Chemokine signaling pathway

Phosphatidylinositol signaling system

mTOR signaling pathway

Apoptosis

VEGF signaling pathway

Focal adhesion

Toll-like receptor signaling pathway

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Insulin signaling pathway

Type II diabetes mellitus

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Chronic myeloid leukemia

Acute myeloid leukemia

Small cell lung cancer

Non-small cell lung cancer

222240_s_at 0.291 3.875 2.288 3.686e-02 0.284 -3.899 ISYNA1 inositol-3-phosphate synthase 1 19 -18406624 AL137749 19p13.11 Hs.405873 6

inositol-3-phosphate synthase activity

binding

cytoplasm

inositol biosynthetic process

metabolic process

phospholipid biosynthetic process

isomerase activity

Streptomycin biosynthesis

Inositol phosphate metabolism

Metabolic pathways

233857_s_at -0.724 7.624 -2.288 3.687e-02 0.284 -3.899 ASB2 ankyrin repeat and SOCS box-containing 2 14 -93470265 AK002049 14q31-q32 Hs.510327 15

intracellular signaling cascade

modification-dependent protein catabolic process

 
208224_at 0.264 6.171 2.288 3.688e-02 0.285 -3.900 HOXB1 homeobox B1 17 -43961805 NM_002144 17q21.3 Hs.99992 23

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

pattern specification process

anterior/posterior pattern formation

protein domain specific binding

rhombomere 4 development

rhombomere 5 development

facial nerve structural organization

facial nucleus development

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

anatomical structure formation involved in morphogenesis

embryonic skeletal system morphogenesis

 
229344_x_at 0.328 5.761 2.288 3.689e-02 0.285 -3.900 RIMKLB ribosomal modification protein rimK-like family member B 12 8741784 AW135012 12p13.31 Hs.504670 4

nucleotide binding

catalytic activity

ATP binding

protein modification process

manganese ion binding

metal ion binding

 
221582_at 0.561 5.568 2.287 3.690e-02 0.285 -3.900 HIST3H2A histone cluster 3, H2a 1 -226711687 BC001193 1q42.13 Hs.26331 Hs.700190 17

nucleosome

DNA binding

nucleus

chromosome

nucleosome assembly

Systemic lupus erythematosus

243285_at 0.274 5.617 2.287 3.690e-02 0.285 -3.900 LOC283335 hypothetical protein LOC283335 12   AI201723 12q13.13 Hs.657060 1    
235695_at 0.212 4.629 2.287 3.691e-02 0.285 -3.900 INPP4A inositol polyphosphate-4-phosphatase, type I, 107kDa 2 98427752, 98427752 AI051236 2q11.2 Hs.469386 16

signal transduction

phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity

hydrolase activity

phosphatidyl-inositol-4,5-bisphosphate 4-phosphatase activity

Inositol phosphate metabolism

Metabolic pathways

Phosphatidylinositol signaling system

224062_x_at 0.289 5.163 2.287 3.691e-02 0.285 -3.900 KLK4 kallikrein-related peptidase 4 19 -56101419 AF113140 19q13.41 Hs.218366 34

serine-type endopeptidase activity

extracellular region

proteolysis

peptidase activity

zinc ion binding

metal ion binding

 
1558128_at 0.240 3.866 2.287 3.691e-02 0.285 -3.900 LOC730202 hypothetical protein LOC730202 14   BC019017 14q32.2 Hs.647565 1    
223758_s_at 0.514 6.231 2.287 3.692e-02 0.285 -3.901 GTF2H2 general transcription factor IIH, polypeptide 2, 44kDa 5 -70366706, 68891809, -972814, 350570 BC005345 5q12.2-q13.3 Hs.191356 Hs.655216 52

nucleotide-excision repair, DNA damage removal

transcription factor activity

nucleus

nucleoplasm

DNA repair

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

response to DNA damage stimulus

translation factor activity, nucleic acid binding

zinc ion binding

response to UV

regulation of transcription

metal ion binding

protein N-terminus binding

Basal transcription factors

Nucleotide excision repair

226259_at 0.359 7.879 2.287 3.694e-02 0.285 -3.901 EXOC6 exocyst complex component 6 10 94584449, 94598204 AL137438 10q23.33 Hs.655657 8

exocyst

vesicle docking during exocytosis

protein transport

 
231659_at 0.246 4.652 2.287 3.694e-02 0.285 -3.901 ST3GAL3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 1 43945804 BE327769 1p34.1 Hs.597915 15

extracellular region

Golgi apparatus

protein amino acid glycosylation

N-acetyllactosaminide alpha-2,3-sialyltransferase activity

membrane

integral to membrane

integral to Golgi membrane

Keratan sulfate biosynthesis

Glycosphingolipid biosynthesis - lacto and neolacto series

Metabolic pathways

221511_x_at -0.251 7.859 -2.287 3.695e-02 0.285 -3.901 CCPG1 cell cycle progression 1 15 -53434729, -53434729 AB033080 15q21.1 Hs.285051 5

cell cycle

membrane

integral to membrane

 
235628_x_at -0.308 5.422 -2.287 3.695e-02 0.285 -3.901 FLJ33630 hypothetical LOC644873 5 -127385142 BG025030 5q23.3 Hs.340623 2    
207031_at -0.192 3.627 -2.286 3.696e-02 0.285 -3.902 NKX3-2 NK3 homeobox 2 4 -13151551 NM_001189 4p16.1 Hs.590927 7

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

determination of left/right symmetry

pancreas development

middle ear morphogenesis

negative regulation of apoptosis

sequence-specific DNA binding

spleen development

organ formation

skeletal system morphogenesis

embryonic skeletal system development

 
204741_at 0.231 5.969 2.286 3.696e-02 0.285 -3.902 BICD1 bicaudal D homolog 1 (Drosophila) 12 32151451 NM_001714 12p11.2-p11.1 Hs.505202 17

structural constituent of cytoskeleton

protein binding

Golgi apparatus

cytoskeleton

RNA processing

transport

intracellular mRNA localization

anatomical structure morphogenesis

 
220706_at 0.180 4.496 2.286 3.697e-02 0.285 -3.902 ADAMTS7 ADAM metallopeptidase with thrombospondin type 1 motif, 7 15 -76838599 NM_014272 15q24.2 Hs.16441 5

metalloendopeptidase activity

extracellular region

proteinaceous extracellular matrix

proteolysis

peptidase activity

zinc ion binding

metal ion binding

 
226260_x_at 0.190 6.326 2.286 3.697e-02 0.285 -3.902 ZNF358 zinc finger protein 358 19 7487003 BF026472   Hs.133475 5

DNA binding

intracellular

nucleus

zinc ion binding

stem cell maintenance

neural tube development

embryonic forelimb morphogenesis

regulation of transcription

metal ion binding

 
239313_at -0.251 5.369 -2.286 3.697e-02 0.285 -3.902 LOC401320 hypothetical LOC401320 7   AI803568 7p15.1 Hs.561708 2    
224761_at -0.247 9.104 -2.286 3.698e-02 0.285 -3.902 GNA13 guanine nucleotide binding protein (G protein), alpha 13 17 -60435870 AI928136 17q24.3 Hs.515018 57

nucleotide binding

patterning of blood vessels

in utero embryonic development

GTPase activity

signal transducer activity

protein binding

GTP binding

cell motion

signal transduction

G-protein coupled receptor protein signaling pathway

protein kinase cascade

Rho protein signal transduction

regulation of cell shape

membrane

guanyl nucleotide binding

cell differentiation

platelet activation

regulation of cell migration

melanosome

Vascular smooth muscle contraction

Long-term depression

Regulation of actin cytoskeleton

204375_at 0.217 6.014 2.286 3.702e-02 0.285 -3.903 CLSTN3 calsyntenin 3 12 7174233 NM_014718 12p13.31 Hs.535378 7

Golgi membrane

calcium ion binding

protein binding

endoplasmic reticulum

endoplasmic reticulum membrane

Golgi apparatus

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

postsynaptic membrane

 
207184_at 0.222 4.361 2.286 3.703e-02 0.285 -3.903 SLC6A13 solute carrier family 6 (neurotransmitter transporter, GABA), member 13 12 -200051 NM_016615 12p13.3 Hs.504398 7

neurotransmitter:sodium symporter activity

gamma-aminobutyric acid:sodium symporter activity

integral to plasma membrane

neurotransmitter transport

symporter activity

membrane

 
215358_x_at 0.325 3.830 2.285 3.705e-02 0.285 -3.904 ZNF37B zinc finger protein 37B (pseudogene) 10 -42328968 AK026980 10q11.21 Hs.646695 Hs.648656 Hs.650553 Hs.684178 7    
1564463_at 0.281 5.465 2.285 3.707e-02 0.285 -3.904 LOC283711 hypothetical protein LOC283711 15   AK093758 15q13.3 Hs.585100 1    
228064_at 0.207 6.631 2.285 3.707e-02 0.285 -3.904 C22orf36 chromosome 22 open reading frame 36 22 -23311590 AW006520 22q11.23 Hs.113314 4    
205451_at -0.222 6.230 -2.285 3.707e-02 0.285 -3.904 FOXO4 forkhead box O4 X 70232750 NM_005938 Xq13.1 Hs.584654 42

G1 phase of mitotic cell cycle

transcription factor activity

nucleus

cytoplasm

cytosol

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

cell cycle

cell cycle arrest

mitotic cell cycle G2/M transition DNA damage checkpoint

multicellular organismal development

muscle organ development

transcription factor binding

negative regulation of cell proliferation

insulin receptor signaling pathway

negative regulation of angiogenesis

transcription activator activity

enzyme binding

cell differentiation

sequence-specific DNA binding

positive regulation of transcription

negative regulation of smooth muscle cell differentiation

 
213914_s_at 0.271 4.721 2.285 3.710e-02 0.285 -3.905 SPTBN1 spectrin, beta, non-erythrocytic 1 2 54536957, 54639034 R85779 2p21 Hs.503178 Hs.705692 46

actin binding

structural constituent of cytoskeleton

calmodulin binding

nucleus

nucleolus

cytoplasm

plasma membrane

common-partner SMAD protein phosphorylation

SMAD protein nuclear translocation

spectrin

cortical cytoskeleton

M band

actin filament capping

 
202132_at 0.244 5.669 2.285 3.710e-02 0.285 -3.905 WWTR1 WW domain containing transcription regulator 1 3 -150720721 AA081084 3q23-q24 Hs.719249 13

negative regulation of transcription from RNA polymerase II promoter

osteoblast differentiation

transcription coactivator activity

transcription corepressor activity

protein binding

nucleus

transcription factor complex

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

transcription regulator activity

glomerulus development

protein homodimerization activity

negative regulation of fat cell differentiation

positive regulation of transcription from RNA polymerase II promoter

cilium morphogenesis

 
202017_at 0.433 5.649 2.284 3.711e-02 0.285 -3.905 EPHX1 epoxide hydrolase 1, microsomal (xenobiotic) 1 224064419, 224079624 NM_000120 1q42.1 Hs.89649 227

epoxide hydrolase activity

endoplasmic reticulum

microsome

response to toxin

membrane

integral to membrane

hydrolase activity

aromatic compound catabolic process

cis-stilbene-oxide hydrolase activity

Metabolism of xenobiotics by cytochrome P450

1558954_at 0.222 5.816 2.284 3.711e-02 0.285 -3.905 SNORA78 small nucleolar RNA, H/ACA box 78 16 1955185 BC028232 16p13.3 Hs.707294 2    
230246_at 0.253 5.517 2.284 3.712e-02 0.285 -3.905 PLAC9 placenta-specific 9 10 81882237 AI275020 10q22.3 Hs.204947 4

extracellular region

 
236499_at 0.214 5.969 2.284 3.713e-02 0.285 -3.906 C1orf86 chromosome 1 open reading frame 86 1 -2110847 AI911410 1p36.33 Hs.107101 Hs.719244 5    
227802_at -0.275 6.121 -2.284 3.714e-02 0.285 -3.906 RUFY3 RUN and FYVE domain containing 3 4 71789517, 71806559, 71806559 AI075999 4q13.3 Hs.713172 8

multicellular organismal development

nervous system development

cell differentiation

filopodium

growth cone

negative regulation of axonogenesis

 
214246_x_at 0.271 7.489 2.284 3.715e-02 0.285 -3.906 MINK1 misshapen-like kinase 1 (zebrafish) 17 4683350 AI859060 17p13.2 Hs.443417 16

nucleotide binding

protein serine/threonine kinase activity

small GTPase regulator activity

protein binding

ATP binding

protein amino acid phosphorylation

response to stress

protein kinase cascade

JNK cascade

multicellular organismal development

transferase activity

 
224646_x_at -1.304 10.172 -2.284 3.716e-02 0.285 -3.906 H19 H19, imprinted maternally expressed transcript (non-protein coding) 11 -1972981 BF569051 11p15.5 Hs.533566 41    
1567247_at -0.264 2.562 -2.284 3.717e-02 0.285 -3.907 OR5H1 olfactory receptor, family 5, subfamily H, member 1 3 99334231 X64988 3q11.2 Hs.537383 1

receptor activity

olfactory receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

sensory perception of smell

integral to membrane

response to stimulus

 
36829_at -0.416 7.455 -2.283 3.718e-02 0.285 -3.907 PER1 period homolog 1 (Drosophila) 17 -7984512 AF022991 17p13.1-p12 Hs.445534 54

signal transducer activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

signal transduction

circadian rhythm

entrainment of circadian clock

negative regulation of transcription

Circadian rhythm - mammal

1556821_x_at -0.427 6.788 -2.283 3.718e-02 0.285 -3.907 DLEU2 deleted in lymphocytic leukemia 2 (non-protein coding) 13 -49454688 H48516 13q14.3 Hs.547964 10    
202962_at 0.263 5.452 2.283 3.720e-02 0.285 -3.907 KIF13B kinesin family member 13B 8 -28980713 NM_015254 8p12 Hs.444767 7

nucleotide binding

microtubule motor activity

protein binding

ATP binding

cytoplasm

cytoskeleton

microtubule

protein targeting

microtubule-based movement

signal transduction

protein kinase binding

T cell activation

 
229071_at 0.316 4.287 2.283 3.721e-02 0.285 -3.907 C17orf100 chromosome 17 open reading frame 100 17 6495782 AI681419 17p13.1 Hs.262480 2    
220195_at -0.383 6.602 -2.283 3.723e-02 0.285 -3.908 MBD5 methyl-CpG binding domain protein 5 2 148932507 NM_018328 2q23.1 Hs.458312 7

DNA binding

nucleus

 
236563_at 0.238 4.179 2.283 3.724e-02 0.285 -3.908 RD3 retinal degeneration 3 1 -209716486 AA719822 1q32.3 Hs.632495 4

visual perception

response to stimulus

 
89977_at -0.489 6.465 -2.283 3.724e-02 0.285 -3.908 ACSM5 acyl-CoA synthetase medium-chain family member 5 16 20328356 AI733019 16p12.3 Hs.659606 3

nucleotide binding

magnesium ion binding

ATP binding

GTP binding

mitochondrion

mitochondrial matrix

lipid metabolic process

fatty acid metabolic process

metabolic process

ligase activity

butyrate-CoA ligase activity

Butanoate metabolism

Metabolic pathways

51158_at 0.216 4.303 2.282 3.725e-02 0.285 -3.908 FAM174B family with sequence similarity 174, member B 15 -90961682 AI801973 15q26.1 Hs.27373 Hs.702316 2

membrane

integral to membrane

 
239403_at 0.210 4.096 2.282 3.725e-02 0.285 -3.908 CCDC120 coiled-coil domain containing 120 X 48803459, 48803459, 48803466 AI668708 Xp11.23 Hs.522643 6

protein binding

 
216620_s_at 0.203 5.850 2.282 3.726e-02 0.285 -3.909 ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 8 1759555 AF009205 8p23 Hs.98594 9

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

intracellular

regulation of Rho protein signal transduction

 
221863_at 0.208 5.125 2.282 3.726e-02 0.285 -3.909 MIER2 mesoderm induction early response 1, family member 2 19 -256574 AW003889 19p13.3 Hs.101891 2    
205805_s_at 0.329 3.580 2.282 3.731e-02 0.286 -3.910 ROR1 receptor tyrosine kinase-like orphan receptor 1 1 64012277, 64012277 NM_005012 1p32-p31 Hs.654491 13

nucleotide binding

transmembrane receptor protein tyrosine kinase activity

receptor activity

ATP binding

cytoplasm

plasma membrane

integral to plasma membrane

protein amino acid phosphorylation

transmembrane receptor protein tyrosine kinase signaling pathway

transferase activity

 
201012_at 0.682 7.340 2.281 3.734e-02 0.286 -3.911 ANXA1 annexin A1 9 74956600 NM_000700 9q12-q21.2 Hs.494173 90

cornified envelope

receptor binding

structural molecule activity

calcium ion binding

calcium-dependent phospholipid binding

nucleus

cytoplasm

cilium

lipid metabolic process

anti-apoptosis

cell motion

inflammatory response

cell cycle

cell surface receptor linked signal transduction

basolateral plasma membrane

peptide cross-linking

phospholipase A2 inhibitor activity

keratinocyte differentiation

protein binding, bridging

regulation of cell proliferation

sarcolemma

arachidonic acid secretion

 
200087_s_at -0.406 9.470 -2.281 3.735e-02 0.286 -3.911 TMED2 transmembrane emp24 domain trafficking protein 2 12 122635028 AK024976 12q24.31 Hs.592682 Hs.75914 10

protein binding

microsome

ER-Golgi intermediate compartment

Golgi apparatus

protein transport

membrane

integral to membrane

vesicle-mediated transport

cytoplasmic vesicle

zymogen granule membrane

 
227962_at -0.279 7.234 -2.281 3.736e-02 0.286 -3.911 ACOX1 acyl-Coenzyme A oxidase 1, palmitoyl 17 -71449186 BF435852 17q24-q25 17q25.1 Hs.464137 26

acyl-CoA dehydrogenase activity

acyl-CoA oxidase activity

acyl-CoA oxidase activity

cytoplasm

mitochondrion

peroxisome

peroxisomal membrane

generation of precursor metabolites and energy

lipid metabolic process

fatty acid beta-oxidation

prostaglandin metabolic process

spermatogenesis

electron carrier activity

protein N-terminus binding

FAD binding

oxidation reduction

Fatty acid metabolism

alpha-Linolenic acid metabolism

Biosynthesis of unsaturated fatty acids

Biosynthesis of plant hormones

Metabolic pathways

PPAR signaling pathway

1557523_at 0.295 3.764 2.281 3.737e-02 0.286 -3.911 ATP6AP1L ATPase, H+ transporting, lysosomal accessory protein 1-like 5 81636921 AW269750 5q14.2 Hs.364045 2

ATP synthesis coupled proton transport

membrane

integral to membrane

proton-transporting V-type ATPase, V1 domain

hydrogen ion transporting ATP synthase activity, rotational mechanism

proton-transporting ATPase activity, rotational mechanism

 
208550_x_at 0.246 5.423 2.280 3.744e-02 0.286 -3.913 KCNG2 potassium voltage-gated channel, subfamily G, member 2 18 75724655 NM_012283 18q22-q23 Hs.247905 2

voltage-gated ion channel activity

delayed rectifier potassium channel activity

protein binding

ion transport

potassium ion transport

regulation of heart contraction

voltage-gated potassium channel complex

membrane

integral to membrane

potassium ion binding

 
223160_s_at -0.246 6.532 -2.280 3.744e-02 0.286 -3.913 SMEK1 SMEK homolog 1, suppressor of mek1 (Dictyostelium) 14 -90993708 AK024297 14q32.12 Hs.533887 9

protein binding

nucleus

cytoplasm

centrosome

 
219798_s_at -0.231 7.338 -2.280 3.744e-02 0.286 -3.913 MEPCE methylphosphate capping enzyme 7 99865464 NM_019606 7q22.1 Hs.178011 6

methyltransferase activity

transferase activity

 
218286_s_at -0.298 8.832 -2.280 3.745e-02 0.286 -3.913 RNF7 ring finger protein 7 3 142939740 NM_014245 3q22-q24 Hs.134623 25

copper ion binding

protein binding

nucleus

cytoplasm

anti-apoptosis

redox signal response

zinc ion binding

induction of apoptosis by oxidative stress

NEDD8 ligase activity

modification-dependent protein catabolic process

protein neddylation

metal ion binding

Ubiquitin mediated proteolysis

227904_at 0.408 4.367 2.280 3.745e-02 0.286 -3.913 AZI2 5-azacytidine induced 2 3 -28348183, -28338850 BF000175 3p24.1 Hs.706676 12

cytoplasm

RIG-I-like receptor signaling pathway

206068_s_at 0.516 5.677 2.280 3.745e-02 0.286 -3.913 ACADL acyl-Coenzyme A dehydrogenase, long chain 2 -210760960 AI367275 2q34-q35 Hs.471277 14

long-chain-acyl-CoA dehydrogenase activity

cytoplasm

mitochondrion

mitochondrial matrix

lipid metabolic process

fatty acid metabolic process

electron carrier activity

FAD binding

oxidation reduction

Fatty acid metabolism

Metabolic pathways

PPAR signaling pathway

211990_at 1.004 9.014 2.280 3.746e-02 0.286 -3.913 HLA-DPA1 major histocompatibility complex, class II, DP alpha 1 6 -33140771, -4413300, -4219191 M27487 6p21.3 Hs.347270 71

antigen processing and presentation of peptide or polysaccharide antigen via MHC class II

plasma membrane

integral to plasma membrane

immune response

MHC class II receptor activity

MHC class II protein complex

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Type I diabetes mellitus

Asthma

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

240891_at -0.298 4.464 -2.279 3.747e-02 0.286 -3.914 FSTL1 follistatin-like 1 3 -121595751 AW613929 3q13.33 Hs.269512 17

calcium ion binding

extracellular region

extracellular region

extracellular space

heparin binding

BMP signaling pathway

 
225391_at -0.394 6.747 -2.279 3.751e-02 0.286 -3.914 LOC93622 hypothetical LOC93622 4   AL562398 4p16.1 Hs.705429 1    
205588_s_at 0.345 4.110 2.279 3.751e-02 0.286 -3.915 FGFR1OP FGFR1 oncogene partner 6 167332805 NM_007045 6q27 Hs.487175 14

centrosome

positive regulation of cell proliferation

microtubule anchoring

 
203116_s_at -0.190 7.941 -2.279 3.751e-02 0.286 -3.915 FECH ferrochelatase (protoporphyria) 18 -53363070 NM_000140 18q21.3 Hs.365365 61

ferrochelatase activity

ferrochelatase activity

protein binding

mitochondrion

mitochondrial inner membrane

mitochondrial matrix

generation of precursor metabolites and energy

heme biosynthetic process

ferrous iron binding

response to light stimulus

detection of UV

membrane

protoporphyrinogen IX metabolic process

metal ion binding

2 iron, 2 sulfur cluster binding

Porphyrin and chlorophyll metabolism

Metabolic pathways

213457_at 0.475 4.635 2.279 3.752e-02 0.286 -3.915 MFHAS1 malignant fibrous histiocytoma amplified sequence 1 8 -8679408 BF739959 8p23.1 Hs.379414 6

protein binding

 
201712_s_at -0.283 6.737 -2.279 3.752e-02 0.286 -3.915 RANBP2 RAN binding protein 2 2 108702368 NM_006267 2q12.3 Hs.199561 Hs.715056 61

peptidyl-prolyl cis-trans isomerase activity

protein binding

intracellular

nucleus

nuclear pore

cytosol

protein folding

protein import into nucleus

zinc ion binding

Ran GTPase binding

protein transport

isomerase activity

modification-dependent protein catabolic process

metal ion binding

intracellular transport

mRNA transport

intracellular protein transmembrane transport

 
225986_x_at -0.396 7.673 -2.279 3.752e-02 0.286 -3.915 CPSF2 cleavage and polyadenylation specific factor 2, 100kDa 14 91658081 AB037788 14q31.1 Hs.657632 24

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

hydrolase activity

 
229382_at 0.324 6.212 2.278 3.756e-02 0.286 -3.916 C1orf183 chromosome 1 open reading frame 183 1 -112069892, -112069892 AW149270 1p13.2 Hs.193406 Hs.657857 3    
221534_at -0.217 7.863 -2.278 3.757e-02 0.286 -3.916 C11orf68 chromosome 11 open reading frame 68 11 -65440859 AF073483 11q13.1 Hs.433573 6    
231882_at -0.245 5.891 -2.278 3.758e-02 0.286 -3.916 FLJ39632 hypothetical LOC642477 14   AL530703 14q11.2 Hs.536395 Hs.647538 2    
207643_s_at -0.244 6.990 -2.278 3.758e-02 0.286 -3.916 TNFRSF1A tumor necrosis factor receptor superfamily, member 1A 12 -6308183 NM_001065 12p13.2 Hs.279594 Hs.713833 271

receptor activity

tumor necrosis factor receptor activity

protein binding

extracellular region

plasma membrane

plasma membrane

integral to plasma membrane

prostaglandin metabolic process

apoptosis

signal transduction

cytokine-mediated signaling pathway

positive regulation of I-kappaB kinase/NF-kappaB cascade

interspecies interaction between organisms

membrane raft

positive regulation of transcription from RNA polymerase II promoter

positive regulation of inflammatory response

MAPK signaling pathway

Cytokine-cytokine receptor interaction

Apoptosis

Adipocytokine signaling pathway

Alzheimer's disease

Amyotrophic lateral sclerosis (ALS)

243259_at -0.302 5.556 -2.278 3.758e-02 0.286 -3.916 ATXN7 ataxin 7 3 63825272 AW081604 3p21.1-p12 Hs.476595 37

protein binding

intracellular

nucleus

nucleolus

cytoplasm

nucleus organization

visual perception

cell death

zinc ion binding

nuclear matrix

histone deubiquitination

regulation of transcription

 
219127_at 0.244 4.213 2.278 3.758e-02 0.286 -3.916 ATAD4 ATPase family, AAA domain containing 4 17 -43384332 NM_024320 17q21.32 Hs.368260 1    
231559_at 0.337 3.719 2.277 3.762e-02 0.286 -3.917 NNMT nicotinamide N-methyltransferase 11 113671744 AV650983 11q23.1 Hs.503911 31

cytoplasm

nicotinamide N-methyltransferase activity

methyltransferase activity

transferase activity

Nicotinate and nicotinamide metabolism

Metabolic pathways

223350_x_at -0.277 7.285 -2.277 3.763e-02 0.287 -3.917 LIN7C lin-7 homolog C (C. elegans) 11 -27472546 N63709 11p14 Hs.693840 Hs.91393 16

protein binding

plasma membrane

tight junction

exocytosis

neurotransmitter secretion

protein transport

synaptosome

cell junction

synapse

postsynaptic membrane

 
229411_at 0.227 5.635 2.277 3.765e-02 0.287 -3.918 PNCK pregnancy up-regulated non-ubiquitously expressed CaM kinase X -152588383, -152588383 AI986390 Xq28 Hs.436667 6

nucleotide binding

calmodulin-dependent protein kinase activity

calcium ion binding

calmodulin binding

ATP binding

nucleus

cytoplasm

protein amino acid phosphorylation

transferase activity

 
1558628_at 0.237 3.005 2.277 3.766e-02 0.287 -3.918 C18orf22 chromosome 18 open reading frame 22 18 75895345 BC016878 18q23 Hs.593610 3

mitochondrion

rRNA processing

 
201986_at -0.305 8.281 -2.277 3.766e-02 0.287 -3.918 MED13 mediator complex subunit 13 17 -57374747 AB011165 17q22-q23 Hs.282678 26

receptor activity

nucleus

transcription initiation from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

ligand-dependent nuclear receptor transcription coactivator activity

androgen receptor signaling pathway

vitamin D receptor binding

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

thyroid hormone receptor binding

 
222566_at -0.297 5.985 -2.277 3.768e-02 0.287 -3.919 SUV420H1 suppressor of variegation 4-20 homolog 1 (Drosophila) 11 -67689761, -67680082 AA056099 11q13.2 Hs.632120 11

protein binding

nucleus

chromosome

methyltransferase activity

chromatin modification

transferase activity

histone-lysine N-methyltransferase activity

regulation of transcription

Lysine degradation

201179_s_at 0.226 6.136 2.276 3.769e-02 0.287 -3.919 GNAI3 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 1 109892708 J03005 1p13 Hs.73799 54

nucleotide binding

GTPase activity

signal transducer activity

protein binding

GTP binding

cytoplasm

Golgi apparatus

transport

signal transduction

G-protein coupled receptor protein signaling pathway

negative regulation of adenylate cyclase activity

guanyl nucleotide binding

Chemokine signaling pathway

Axon guidance

Tight junction

Gap junction

Leukocyte transendothelial migration

Long-term depression

Melanogenesis

1560133_at -0.293 3.194 -2.276 3.770e-02 0.287 -3.919 GIGYF2 GRB10 interacting GYF protein 2 2 233270258 BC012484 2q37.1 Hs.565319 23

protein binding

 
1556096_s_at -1.454 5.498 -2.276 3.772e-02 0.287 -3.920 UNC13C unc-13 homolog C (C. elegans) 15 52092392 AL834407 15q21.3 Hs.657273 4

cytoplasm

plasma membrane

exocytosis

intracellular signaling cascade

synaptic transmission

zinc ion binding

diacylglycerol binding

cell junction

synapse

metal ion binding

 
210331_at 0.187 4.914 2.276 3.773e-02 0.287 -3.920 HECW1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 7 43118722 AB048365 7p14.1-p13 Hs.164453 8

protein binding

intracellular

cytoplasm

protein modification process

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

 
1557079_at 0.325 2.395 2.276 3.775e-02 0.287 -3.920 ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) 13 100902966 AI753143 13q33 Hs.696554 5

receptor activity

binding

extracellular region

cell adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

integrin complex

 
230718_at 0.234 3.357 2.275 3.777e-02 0.287 -3.921 HSF5 heat shock transcription factor family member 5 17 -53852527 AL137385 17q22 Hs.380061 1

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

sequence-specific DNA binding

 
226950_at 0.307 5.333 2.275 3.779e-02 0.287 -3.921 ACVRL1 activin A receptor type II-like 1 12 50587468, 50592379 T63524 12q11-q14 Hs.591026 75

nucleotide binding

magnesium ion binding

angiogenesis

in utero embryonic development

receptor activity

ATP binding

cytoplasm

plasma membrane

integral to plasma membrane

protein amino acid phosphorylation

negative regulation of cell adhesion

signal transduction

transforming growth factor beta receptor signaling pathway

regulation of blood pressure

negative regulation of cell proliferation

cell surface

negative regulation of endothelial cell migration

activin receptor activity, type I

transferase activity

manganese ion binding

negative regulation of cell growth

positive regulation of BMP signaling pathway

wound healing, spreading of epidermal cells

positive regulation of transcription

SMAD binding

activin binding

transforming growth factor beta binding

negative regulation of focal adhesion formation

Cytokine-cytokine receptor interaction

TGF-beta signaling pathway

208462_s_at -0.290 5.207 -2.275 3.779e-02 0.287 -3.921 ABCC9 ATP-binding cassette, sub-family C (CFTR/MRP), member 9 12 -21849374, -21841590 NM_005691 12p12.1 Hs.446050 35

nucleotide binding

receptor activity

transporter activity

ATP binding

transport

sulfonylurea receptor activity

ATP-sensitive potassium channel complex

potassium ion import

potassium channel regulator activity

membrane

integral to membrane

ATPase activity

ATPase activity, coupled to transmembrane movement of substances

defense response to virus

ABC transporters

223077_at 0.303 4.823 2.274 3.785e-02 0.288 -3.923 TMOD3 tropomodulin 3 (ubiquitous) 15 49909180 AW576360 15q21.1-q21.2 Hs.4998 9

actin binding

tropomyosin binding

cytoplasm

cytoskeleton

 
201870_at -0.265 6.403 -2.274 3.786e-02 0.288 -3.923 TOMM34 translocase of outer mitochondrial membrane 34 20 -43004184 NM_006809   Hs.517066 13

signal sequence binding

binding

cytoplasm

mitochondrion

mitochondrial outer membrane

protein targeting to mitochondrion

membrane

integral to membrane

heat shock protein binding

 
203516_at -0.423 8.015 -2.274 3.787e-02 0.288 -3.923 SNTA1 syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component) 20 -31459423 NM_003098 20q11.2 Hs.31121 36

actin binding

calcium ion binding

calmodulin binding

cytoplasm

cytoskeleton

muscle contraction

neuromuscular junction development

cell junction

PDZ domain binding

sarcolemma

postsynaptic membrane

 
240889_at 0.228 4.479 2.274 3.787e-02 0.288 -3.923 CDRT15L2 CMT1A duplicated region transcript 15-like 2 17   AA446207 17p11.2 Hs.131916 1    
228197_at 0.186 5.634 2.274 3.788e-02 0.288 -3.923 C1orf86 chromosome 1 open reading frame 86 1 -2110847 BG030616 1p36.33 Hs.107101 Hs.719244 5    
221523_s_at -0.324 9.420 -2.274 3.788e-02 0.288 -3.923 RRAGD Ras-related GTP binding D 6 -90131055 AL138717 6q15-q16 Hs.31712 7

nucleotide binding

protein binding

GTP binding

nucleus

cytoplasm

protein heterodimerization activity

 
208093_s_at -0.247 7.737 -2.274 3.788e-02 0.288 -3.923 NDEL1 nudE nuclear distribution gene E homolog (A. nidulans)-like 1 17 8279903 NM_030808 17p13.1 Hs.372123 38

condensed chromosome kinetochore

protein binding

cytoplasm

centrosome

spindle

cytoskeleton

microtubule

transport

chromosome segregation

multicellular organismal development

nervous system development

cell differentiation

 
203467_at 0.194 6.198 2.274 3.789e-02 0.288 -3.923 PMM1 phosphomannomutase 1 22 -40302835 NM_002676 22q13.2 Hs.75835 18

phosphomannomutase activity

cytoplasm

metabolic process

isomerase activity

mannose biosynthetic process

Fructose and mannose metabolism

Amino sugar and nucleotide sugar metabolism

Metabolic pathways

209894_at 0.708 5.404 2.274 3.790e-02 0.288 -3.924 LEPR leptin receptor 1 65658905, 65658905, 65658905 U50748 1p31 Hs.705413 260

angiogenesis

ovulation from ovarian follicle

cytokine receptor activity

protein binding

extracellular region

extracellular space

plasma membrane

energy reserve metabolic process

cell surface receptor linked signal transduction

multicellular organismal development

female pregnancy

cholesterol metabolic process

integral to membrane

protein-hormone receptor activity

peptide hormone binding

cellular response to nutrient levels

response to nicotine

response to chemical stimulus

eating behavior

response to estrogen stimulus

negative regulation of hydrolase activity

Cytokine-cytokine receptor interaction

Neuroactive ligand-receptor interaction

Jak-STAT signaling pathway

Adipocytokine signaling pathway

205503_at -0.219 3.973 -2.274 3.790e-02 0.288 -3.924 PTPN14 protein tyrosine phosphatase, non-receptor type 14 1 -212597633 NM_005401 1q32.2 Hs.696573 13

protein tyrosine phosphatase activity

binding

cytoplasm

cytoskeleton

protein amino acid dephosphorylation

hydrolase activity

 
1552819_at 0.312 5.172 2.273 3.790e-02 0.288 -3.924 C21orf86 chromosome 21 open reading frame 86 21   NM_153454 21q22.3 Hs.710382 2    
221746_at -0.203 7.837 -2.273 3.794e-02 0.288 -3.925 UBL4A ubiquitin-like 4A X -153365249 BE543027 Xq28 Hs.76480 9

protein modification process

small conjugating protein ligase activity

 
204562_at 0.258 5.333 2.273 3.794e-02 0.288 -3.925 IRF4 interferon regulatory factor 4 6 336751 NM_002460 6p25-p23 Hs.401013 46

nuclear nucleosome

transcription factor activity

RNA polymerase II transcription factor activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

transcription factor binding

positive regulation of specific transcription from RNA polymerase II promoter

transcription activator activity

T cell activation

myeloid dendritic cell differentiation

positive regulation of DNA binding

histone H3 acetylation

histone H4 acetylation

positive regulation of interleukin-10 biosynthetic process

positive regulation of interleukin-2 biosynthetic process

positive regulation of interleukin-13 biosynthetic process

positive regulation of interleukin-4 biosynthetic process

regulation of T-helper cell differentiation

positive regulation of transcription

 
34187_at 0.223 4.009 2.273 3.794e-02 0.288 -3.925 RBMS2 RNA binding motif, single stranded interacting protein 2 12 55201875 D28483 12q13.3 Hs.505729 Hs.683360 7

nucleotide binding

RNA binding

nucleus

RNA processing

 
202772_at 0.209 8.594 2.273 3.795e-02 0.288 -3.925 HMGCL 3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase 1 -24000953 NM_000191 1p36.1-p35 Hs.533444 Hs.603409 25

hydroxymethylglutaryl-CoA lyase activity

hydroxymethylglutaryl-CoA lyase activity

mitochondrion

mitochondrial inner membrane

mitochondrial matrix

mitochondrial matrix

metabolic process

lyase activity

metal ion binding

Synthesis and degradation of ketone bodies

Valine, leucine and isoleucine degradation

Butanoate metabolism

Metabolic pathways

229222_at 0.408 6.266 2.273 3.795e-02 0.288 -3.925 ACSS3 acyl-CoA synthetase short-chain family member 3 12 79995939 AI123815 12q21.31 Hs.259559 2

nucleotide binding

acetate-CoA ligase activity

ATP binding

mitochondrion

metabolic process

ligase activity

Propanoate metabolism

Metabolic pathways

222815_at -0.321 4.330 -2.273 3.796e-02 0.288 -3.925 RLIM ring finger protein, LIM domain interacting X -73719537 BE966018 Xq13-q21 Hs.653288 9

transcription corepressor activity

ubiquitin-protein ligase activity

protein binding

zinc ion binding

negative regulation of transcription

ligase activity

transcriptional repressor complex

modification-dependent protein catabolic process

metal ion binding

 
207901_at -0.218 2.040 -2.273 3.797e-02 0.288 -3.925 IL12B interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40) 5 -158674368 NM_002187 5q31.1-q33.1 Hs.674 222

natural killer cell activation during immune response

positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target

signal transducer activity

cytokine receptor activity

cytokine activity

interleukin-12 receptor binding

protein binding

extracellular region

cell cycle arrest

cell surface receptor linked signal transduction

response to UV-B

membrane

cell migration

sensory perception of pain

positive regulation of interferon-gamma production

positive regulation of natural killer cell activation

positive regulation of smooth muscle cell apoptosis

regulation of cytokine biosynthetic process

T-helper 1 type immune response

T-helper cell differentiation

positive regulation of activated T cell proliferation

interleukin-12 alpha subunit binding

protein homodimerization activity

interleukin-12 complex

positive regulation of interferon-gamma biosynthetic process

positive regulation of cell adhesion

protein heterodimerization activity

negative regulation of smooth muscle cell proliferation

Cytokine-cytokine receptor interaction

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

Jak-STAT signaling pathway

Type I diabetes mellitus

Allograft rejection

216994_s_at 0.229 4.688 2.272 3.798e-02 0.288 -3.926 RUNX2 runt-related transcription factor 2 6 45404031, 45497891 L40992 6p21 Hs.535845 152

osteoblast differentiation

transcription factor activity

RNA polymerase II transcription factor activity

protein binding

ATP binding

nucleus

regulation of transcription, DNA-dependent

negative regulation of transcription

transcription activator activity

 
214482_at -0.256 5.218 -2.272 3.798e-02 0.288 -3.926 ZBTB25 zinc finger and BTB domain containing 25 14 -64023307 NM_006977 14q23-q24 Hs.654571 6

transcription factor activity

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
203771_s_at 0.321 6.944 2.272 3.799e-02 0.288 -3.926 BLVRA biliverdin reductase A 7 43764796 AA740186 7p14-cen Hs.488143 17

biliverdin reductase activity

binding

cytoplasm

zinc ion binding

oxidoreductase activity

heme catabolic process

metal ion binding

oxidation reduction

Porphyrin and chlorophyll metabolism

202609_at 0.340 7.551 2.272 3.800e-02 0.288 -3.926 EPS8 epidermal growth factor receptor pathway substrate 8 12 -15664342 NM_004447 12q13 Hs.591160 35

SH3/SH2 adaptor activity

protein binding

signal transduction

epidermal growth factor receptor signaling pathway

cell proliferation

adult locomotory behavior

postsynaptic density

N-methyl-D-aspartate selective glutamate receptor complex

synaptosome

actin cytoskeleton reorganization

behavioral response to ethanol

 
211535_s_at 0.272 7.168 2.272 3.802e-02 0.288 -3.926 FGFR1 fibroblast growth factor receptor 1 8 -38400008, -38387812 M60485 8p11.2-p11.1 Hs.264887 187

MAPKKK cascade

nucleotide binding

skeletal system development

receptor activity

fibroblast growth factor receptor activity

fibroblast growth factor receptor activity

protein binding

ATP binding

membrane fraction

plasma membrane

integral to plasma membrane

protein amino acid phosphorylation

heparin binding

fibroblast growth factor receptor signaling pathway

fibroblast growth factor receptor signaling pathway

cell growth

transferase activity

MAPK signaling pathway

Adherens junction

Regulation of actin cytoskeleton

Pathways in cancer

Prostate cancer

Melanoma

232156_at -0.472 5.818 -2.272 3.803e-02 0.288 -3.927 MUDENG MU-2/AP1M2 domain containing, death-inducing 14 56805358 AK024921 14q22.3 Hs.597349 9

protein binding

intracellular protein transport

vesicle-mediated transport

clathrin adaptor complex

 
239111_at 0.246 5.197 2.272 3.805e-02 0.288 -3.927 PRDM8 PR domain containing 8 4 81325447, 81337680 AI077328 4q21 Hs.373642 4

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
224504_s_at -0.197 6.374 -2.271 3.805e-02 0.288 -3.927 BUD13 BUD13 homolog (S. cerevisiae) 11 -116124097 BC006350 11q23.3 Hs.437341 9    
232192_at 0.256 5.032 2.271 3.806e-02 0.288 -3.927 LOC153811 hypothetical protein LOC153811 5   AU145402 5q35.3 Hs.144515 1    
201511_at -0.181 7.540 -2.271 3.808e-02 0.288 -3.928 AAMP angio-associated, migratory cell protein 2 -218837095 NM_001087 2q35 Hs.83347 11

angiogenesis

cytoplasm

plasma membrane

multicellular organismal development

heparin binding

cell surface

positive regulation of endothelial cell migration

smooth muscle cell migration

cell differentiation

 
243365_s_at 0.296 4.261 2.271 3.809e-02 0.288 -3.928 AUTS2 autism susceptibility candidate 2 7 68701840, 68701841, 68701841 AI417756 7q11.22 Hs.654801 Hs.712991 13

molecular_function

cellular_component

biological_process

 
217739_s_at -0.479 8.363 -2.271 3.810e-02 0.288 -3.928 NAMPT nicotinamide phosphoribosyltransferase 7 -105675967 NM_005746 7q22.3 Hs.489615 98

cytokine activity

cytoplasm

cytosol

signal transduction

cell-cell signaling

positive regulation of cell proliferation

NAD biosynthetic process

transferase activity, transferring glycosyl groups

pyridine nucleotide biosynthetic process

nicotinamide phosphoribosyltransferase activity

nicotinamide phosphoribosyltransferase activity

Nicotinate and nicotinamide metabolism

231228_at 0.241 5.642 2.270 3.813e-02 0.288 -3.929 BCL2L1 BCL2-like 1 20 -29715921 AW263226 20q11.21 Hs.516966 295

release of cytochrome c from mitochondria

nucleus

mitochondrion

mitochondrial outer membrane

mitochondrial outer membrane

anti-apoptosis

negative regulation of survival gene product expression

membrane

integral to membrane

response to cytokine stimulus

identical protein binding

regulation of mitochondrial membrane permeability

regulation of mitochondrial membrane potential

Apoptosis

Jak-STAT signaling pathway

Amyotrophic lateral sclerosis (ALS)

Pathways in cancer

Pancreatic cancer

Chronic myeloid leukemia

Small cell lung cancer

218655_s_at -0.244 6.161 -2.270 3.815e-02 0.288 -3.929 CCDC49 coiled-coil domain containing 49 17 -34210971 NM_017748 17q12 Hs.406223 3    
1554206_at -0.424 5.100 -2.270 3.815e-02 0.288 -3.930 TMLHE trimethyllysine hydroxylase, epsilon X -154372966 BC025269 Xq28 Hs.133321 12

iron ion binding

mitochondrion

mitochondrial matrix

mitochondrial matrix

electron carrier activity

oxidoreductase activity

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

L-ascorbic acid binding

carnitine biosynthetic process

trimethyllysine dioxygenase activity

oxidation reduction

Lysine degradation

217176_s_at -0.349 2.956 -2.269 3.822e-02 0.289 -3.931 ZFX zinc finger protein, X-linked X 24079728 X59740 Xp21.3 Hs.336681 13

DNA binding

transcription coactivator activity

intracellular

nucleus

nucleolus

zinc ion binding

transcription regulator activity

regulation of transcription

metal ion binding

 
226967_at 0.234 6.463 2.269 3.822e-02 0.289 -3.931 FIZ1 FLT3-interacting zinc finger 1 19 -60794548 BG231981 19q13.42 Hs.515617 5

nucleic acid binding

receptor binding

intracellular

nucleus

cytoplasm

zinc ion binding

protein kinase binding

regulation of transcription

metal ion binding

 
225864_at 0.423 5.364 2.269 3.822e-02 0.289 -3.931 FAM84B family with sequence similarity 84, member B 8 -127633868 AL039862 8q24.21 Hs.124951 5

protein binding

cytoplasm

plasma membrane

 
232281_at 0.228 5.756 2.269 3.824e-02 0.289 -3.932 LOC148189 hypothetical LOC148189 19 -32973241 AU147637 19q11 Hs.565253 2    
218189_s_at 0.459 6.297 2.269 3.824e-02 0.289 -3.932 NANS N-acetylneuraminic acid synthase 9 99858779 NM_018946 9p24.1-p23 Hs.522310 Hs.665191 9

cytoplasm

cytosol

metabolic process

N-acylneuraminate cytidylyltransferase activity

lipopolysaccharide biosynthetic process

carbohydrate biosynthetic process

transferase activity

N-acetylneuraminic acid phosphate synthase activity

N-acylneuraminate-9-phosphate synthase activity

N-acetylneuraminate synthase activity

Amino sugar and nucleotide sugar metabolism

Metabolic pathways

224345_x_at 0.267 10.762 2.269 3.826e-02 0.289 -3.932 FAM162A family with sequence similarity 162, member A 3 123585712 AF107495 3q21.1 Hs.584881 8

membrane

integral to membrane

 
210872_x_at 0.263 4.638 2.269 3.826e-02 0.289 -3.932 GAS7 growth arrest-specific 7 17 -9754650, -9754650, -9754650, -9754650 BC001152 17p13.1 Hs.462214 11

transcription factor activity

protein binding

cytoplasm

cell cycle arrest

multicellular organismal development

nervous system development

cell differentiation

 
203037_s_at 0.367 8.141 2.268 3.829e-02 0.289 -3.933 MTSS1 metastasis suppressor 1 8 -125632208 NM_014751 8p22 Hs.336994 Hs.700429 19

ruffle

actin monomer binding

receptor binding

cytoplasm

cell motion

cell adhesion

signal transduction

transmembrane receptor protein tyrosine kinase signaling pathway

cytoskeletal adaptor activity

actin cytoskeleton

SH3 domain binding

actin cytoskeleton organization

endocytic vesicle

filopodium assembly

 
209315_at -0.687 5.764 -2.268 3.831e-02 0.289 -3.933 HBS1L HBS1-like (S. cerevisiae) 6 -135398687, -135323215, -135323213 AW297143 6q23-q24 Hs.378532 12

nucleotide binding

translation elongation factor activity

GTPase activity

GTP binding

translation

signal transduction

 
212179_at -0.376 8.318 -2.268 3.832e-02 0.289 -3.933 SFRS18 splicing factor, arginine/serine-rich 18 6 -99954561 AW157501 6q16.3 Hs.520287 8

nucleus

nuclear speck

 
218432_at -0.494 9.712 -2.268 3.834e-02 0.289 -3.934 FBXO3 F-box protein 3 11 -33724866, -33719065 NM_012175 11p13 Hs.406787 8

ubiquitin-protein ligase activity

proteolysis

modification-dependent protein catabolic process

 
235240_at -0.289 5.091 -2.267 3.836e-02 0.289 -3.934 ATXN3 ataxin 3 14 -91594648 N51479 14q24.3-q32.2 Hs.532632 98

protein binding

nucleus

nucleoplasm

cytoplasm

nucleotide-excision repair

synaptic transmission

nervous system development

cell death

nuclear matrix

hydrolase activity

regulation of transcription

 
1553148_a_at -0.455 5.267 -2.267 3.836e-02 0.289 -3.934 SNX13 sorting nexin 13 7 -17796910 R75838 7p21.1 Hs.487648 10

signal transducer activity

protein binding

cell communication

negative regulation of signal transduction

protein transport

phosphoinositide binding

 
234925_at -0.191 3.471 -2.267 3.837e-02 0.289 -3.935 LOC732275 similar to hCG1645603 16 -84922956 AL137562 16q24.1 Hs.558087 Hs.652773 Hs.716963 2    
210247_at 0.388 4.790 2.267 3.837e-02 0.289 -3.935 SYN2 synapsin II 3 12020861, 12020861 AW139618 3p25 Hs.445503 22

catalytic activity

protein binding

ATP binding

synaptic transmission

neurotransmitter secretion

cell junction

synaptic vesicle membrane

synapse

 
219431_at -0.227 7.274 -2.267 3.838e-02 0.289 -3.935 ARHGAP10 Rho GTPase activating protein 10 4 148872902 NM_024605 4q31.23 Hs.368631 4

GTPase activator activity

Rho GTPase activator activity

protein binding

intracellular

cytoplasm

plasma membrane

cytoskeleton organization

signal transduction

perinuclear region of cytoplasm

 
230120_s_at -0.384 4.957 -2.267 3.840e-02 0.289 -3.935 PLGLB2 plasminogen-like B2 2 -87091098, 87828720 AI088455 2p11-q11 Hs.652169 12    
222050_at 0.249 5.080 2.267 3.840e-02 0.289 -3.935 FXR2 fragile X mental retardation, autosomal homolog 2 17 -7435271 AI703341 17p13.1 Hs.52788 19

RNA binding

protein binding

cytoplasm

cytosolic large ribosomal subunit

 
204036_at 0.640 4.657 2.267 3.841e-02 0.289 -3.935 LPAR1 lysophosphatidic acid receptor 1 9 -112675874 AW269335 9q31.3 Hs.126667 39

activation of MAPK activity

lysosphingolipid and lysophosphatidic acid receptor activity

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

activation of phospholipase C activity

elevation of cytosolic calcium ion concentration

PDZ domain binding

bleb formation

positive regulation of Rho protein signal transduction

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of MAPKKK cascade

Neuroactive ligand-receptor interaction

Gap junction

206724_at 0.219 2.794 2.267 3.841e-02 0.289 -3.936 CBX4 chromobox homolog 4 (Pc class homolog, Drosophila) 17 -75421549 NM_003655 17q25.3 Hs.714363 25

chromatin

chromatin binding

transcription corepressor activity

nucleus

chromatin assembly or disassembly

anti-apoptosis

negative regulation of transcription

chromatin modification

enzyme binding

modification-dependent protein catabolic process

 
1553482_at -0.174 5.135 -2.266 3.846e-02 0.290 -3.937 C15orf32 chromosome 15 open reading frame 32 15 90815910 NM_153040 15q26.1 Hs.367879 4    
235451_at -0.323 7.460 -2.266 3.847e-02 0.290 -3.937 SMAD5 SMAD family member 5 5 135496434 AI439752 5q31 Hs.167700 56

transcription factor activity

receptor signaling protein activity

protein binding

intracellular

nucleus

nucleoplasm

transcription factor complex

cytoplasm

cytosol

regulation of transcription, DNA-dependent

signal transduction

transforming growth factor beta receptor signaling pathway

embryonic pattern specification

integral to membrane

transcription activator activity

BMP signaling pathway

BMP signaling pathway

transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity

TGF-beta signaling pathway

222912_at 0.291 4.060 2.265 3.851e-02 0.290 -3.938 ARRB1 arrestin, beta 1 11 -74654129 BE207758 11q13 Hs.503284 Hs.625320 86

enzyme inhibitor activity

protein binding

intracellular

membrane fraction

soluble fraction

cytoplasm

heterotrimeric G-protein complex

plasma membrane

signal transduction

sensory perception

phototransduction

regulation of G-protein coupled receptor protein signaling pathway

response to stimulus

MAPK signaling pathway

Chemokine signaling pathway

Endocytosis

201102_s_at 0.316 5.877 2.265 3.851e-02 0.290 -3.938 PFKL phosphofructokinase, liver 21 44544352, 44544357 NM_002626 21q22.3 Hs.255093 28

nucleotide binding

magnesium ion binding

6-phosphofructokinase activity

6-phosphofructokinase activity

ATP binding

soluble fraction

cytoplasm

cytosol

cytosol

6-phosphofructokinase complex

carbohydrate metabolic process

fructose 6-phosphate metabolic process

fructose 6-phosphate metabolic process

glycolysis

response to glucose stimulus

kinase activity

transferase activity

kinase binding

identical protein binding

negative regulation of insulin secretion

protein oligomerization

fructose-6-phosphate binding

Glycolysis / Gluconeogenesis

Pentose phosphate pathway

Fructose and mannose metabolism

Galactose metabolism

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

211237_s_at 0.160 6.251 2.265 3.852e-02 0.290 -3.938 FGFR4 fibroblast growth factor receptor 4 5 176446526, 176449156 AF202063 5q35.1-qter Hs.165950 90

nucleotide binding

induction of an organ

receptor activity

fibroblast growth factor receptor activity

ATP binding

plasma membrane

integral to plasma membrane

protein amino acid phosphorylation

fibroblast growth factor receptor signaling pathway

transferase activity

lung development

MAPK signaling pathway

Endocytosis

Regulation of actin cytoskeleton

1552670_a_at -0.841 6.455 -2.265 3.852e-02 0.290 -3.938 PPP1R3B protein phosphatase 1, regulatory (inhibitor) subunit 3B 8 -9031176 NM_024607 8p23.1 Hs.458513 7

carbohydrate metabolic process

glycogen metabolic process

Insulin signaling pathway

232697_at 0.247 4.273 2.265 3.852e-02 0.290 -3.938 LRFN2 leucine rich repeat and fibronectin type III domain containing 2 6 -40467350 AW161909 6p21.2-p21.1 Hs.250015 5

protein binding

membrane

integral to membrane

 
212034_s_at 0.244 7.534 2.265 3.853e-02 0.290 -3.938 EXOC7 exocyst complex component 7 17 -71588693, -71588681, -71588681 AB028990 17q25.1 Hs.514496 20

exocyst

cytoplasm

microtubule organizing center

cytosol

plasma membrane

exocytosis

protein transport

centriolar satellite

Insulin signaling pathway

216909_at 0.249 5.520 2.265 3.854e-02 0.290 -3.938 RRP12 ribosomal RNA processing 12 homolog (S. cerevisiae) 10 -99106448 AK021460 10q24.1 Hs.434251 15

protein binding

nucleus

nucleolus

membrane

integral to membrane

 
225570_at 0.613 8.295 2.265 3.854e-02 0.290 -3.939 SLC41A1 solute carrier family 41, member 1 1 -204024843 AW439816 1q32.1 Hs.20274 4

magnesium ion binding

plasma membrane

cation transport

cation transmembrane transporter activity

integral to membrane

 
231002_s_at -0.253 5.586 -2.265 3.855e-02 0.290 -3.939 RABEP1 rabaptin, RAB GTPase binding effector protein 1 17 5126281 AA778438 17p13.2 Hs.584784 Hs.592121 19

GTPase activator activity

protein binding

cytoplasm

early endosome

endocytosis

apoptosis

membrane fusion

growth factor activity

protein transport

recycling endosome

Endocytosis

204353_s_at -0.231 4.070 -2.264 3.862e-02 0.290 -3.940 POT1 POT1 protection of telomeres 1 homolog (S. pombe) 7 -124249675 BC002923 7q31.33 Hs.31968 40

nuclear telomere cap complex

DNA binding

protein binding

nucleus

nucleoplasm

chromosome

telomerase inhibitor activity

telomere capping

telomere capping

DEAD/H-box RNA helicase binding

telomere formation via telomerase

negative regulation of telomere maintenance via telomerase

positive regulation of telomere maintenance via telomerase

DNA duplex unwinding

single-stranded telomeric DNA binding

positive regulation of helicase activity

positive regulation of telomerase activity

negative regulation of telomerase activity

positive regulation of DNA strand elongation

 
235394_at -0.372 6.257 -2.264 3.864e-02 0.290 -3.941 PLAA phospholipase A2-activating protein 9 -26893368 AW614597 9p21 Hs.27182 15

protein binding

phospholipid metabolic process

inflammatory response

signal transduction

phospholipase A2 activator activity

 
200615_s_at 0.329 7.743 2.263 3.865e-02 0.291 -3.941 AP2B1 adaptor-related protein complex 2, beta 1 subunit 17 30938394 AL567295 17q11.2-q12 Hs.514819 36

protein binding

cytosol

plasma membrane

coated pit

intracellular protein transport

protein transporter activity

vesicle-mediated transport

membrane coat

clathrin adaptor complex

regulation of defense response to virus by virus

Endocytosis

Huntington's disease

227374_at 0.226 6.107 2.263 3.867e-02 0.291 -3.941 EARS2 glutamyl-tRNA synthetase 2, mitochondrial (putative) 16 -23440834 AA833716 16p12.2 Hs.620541 6

nucleotide binding

RNA binding

glutamate-tRNA ligase activity

ATP binding

cytoplasm

mitochondrion

mitochondrial matrix

glutamyl-tRNA aminoacylation

ligase activity

Porphyrin and chlorophyll metabolism

Aminoacyl-tRNA biosynthesis

Metabolic pathways

1555852_at 0.479 4.364 2.263 3.868e-02 0.291 -3.942 PSMB9 proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2) 6 32929915, 4202792, 4007991 AI375915 6p21.3 Hs.654585 72

threonine-type endopeptidase activity

nucleus

cytoplasm

cytosol

proteasome core complex

immune response

peptidase activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

proteolysis involved in cellular protein catabolic process

Proteasome

216452_at 0.226 3.680 2.263 3.868e-02 0.291 -3.942 TRPM3 transient receptor potential cation channel, subfamily M, member 3 9 -72588597, -72339785, -72339785 AB046836 9q21.12 Hs.47288 19

calcium channel activity

calcium ion binding

cation transport

calcium ion transport

membrane

integral to membrane

 
212917_x_at -0.358 6.537 -2.263 3.868e-02 0.291 -3.942 RECQL RecQ protein-like (DNA helicase Q1-like) 12 -21513111 AI814728 12p12 Hs.235069 29

nucleotide binding

DNA strand renaturation

DNA strand annealing activity

DNA binding

ATP-dependent DNA helicase activity

protein binding

ATP binding

nucleus

DNA repair

DNA recombination

hydrolase activity

 
202352_s_at -0.225 8.329 -2.263 3.868e-02 0.291 -3.942 PSMD12 proteasome (prosome, macropain) 26S subunit, non-ATPase, 12 17 -62767081, -62767080 AI446530 17q24.2 Hs.646575 39

protein binding

cytosol

proteasome regulatory particle

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

201244_s_at -0.367 8.859 -2.263 3.869e-02 0.291 -3.942 RAF1 v-raf-1 murine leukemia viral oncogene homolog 1 3 -12600099 NM_002880 3p25 Hs.159130 273

nucleotide binding

protein serine/threonine kinase activity

receptor signaling protein activity

protein binding

ATP binding

mitochondrial outer membrane

cytosol

plasma membrane

protein amino acid phosphorylation

apoptosis

cytoskeleton organization

Ras protein signal transduction

zinc ion binding

cell proliferation

transferase activity

diacylglycerol binding

metal ion binding

nerve growth factor receptor signaling pathway

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

Vascular smooth muscle contraction

VEGF signaling pathway

Focal adhesion

Gap junction

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Long-term potentiation

Neurotrophin signaling pathway

Long-term depression

Regulation of actin cytoskeleton

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Melanoma

Bladder cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Non-small cell lung cancer

219579_at 0.211 5.995 2.263 3.870e-02 0.291 -3.942 RAB3IL1 RAB3A interacting protein (rabin3)-like 1 11 -61421348 NM_013401 11q12-q13.1 Hs.13759 4

guanyl-nucleotide exchange factor activity

protein binding

 
217800_s_at -0.308 7.775 -2.263 3.870e-02 0.291 -3.942 NDFIP1 Nedd4 family interacting protein 1 5 141468507 NM_030571 5q31.3 Hs.653510 Hs.9788 11

signal transducer activity

protein binding

Golgi apparatus

cellular iron ion homeostasis

negative regulation of gene expression

membrane

integral to membrane

positive regulation of protein ubiquitination

negative regulation of transporter activity

positive regulation of I-kappaB kinase/NF-kappaB cascade

perinuclear region of cytoplasm

negative regulation of protein transport

 
205189_s_at 0.217 6.065 2.263 3.870e-02 0.291 -3.942 FANCC Fanconi anemia, complementation group C 9 -96901156 NM_000136 9q22.3 Hs.494529 77

protein binding

nucleus

cytoplasm

cytosol

DNA repair

protein complex assembly

response to DNA damage stimulus

 
1565814_at 0.169 4.881 2.263 3.871e-02 0.291 -3.942 TRIM36 tripartite motif-containing 36 5 -114541134, -114534698, -114488357 BC017346 5q22.3 Hs.519514 Hs.638953 5

acrosomal vesicle

protein binding

intracellular

cytoplasm

acrosome reaction

zinc ion binding

metal ion binding

 
224561_s_at -0.200 11.191 -2.262 3.872e-02 0.291 -3.943 MORF4L1 mortality factor 4 like 1 15 76952226 BF340288 15q24 Hs.374503 25

protein binding

nucleus

DNA repair

response to DNA damage stimulus

chromatin modification

histone deacetylation

Sin3 complex

NuA4 histone acetyltransferase complex

regulation of growth

histone H4 acetylation

histone H2A acetylation

regulation of transcription

 
226952_at -0.366 5.622 -2.262 3.873e-02 0.291 -3.943 EAF1 ELL associated factor 1 3 15444067 AU149385 3p25.1 Hs.716733 9

protein binding

nucleus

Cajal body

nuclear speck

regulation of transcription

 
203603_s_at -0.516 5.893 -2.262 3.875e-02 0.291 -3.943 ZEB2 zinc finger E-box binding homeobox 2 2 -144862052 NM_014795 2q22.3 Hs.34871 49

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

nervous system development

zinc ion binding

negative regulation of transcription

phosphatase regulator activity

sequence-specific DNA binding

SMAD binding

metal ion binding

 
229677_at 0.214 5.731 2.262 3.875e-02 0.291 -3.943 SLC39A3 solute carrier family 39 (zinc transporter), member 3 19 -2685523, -2683522 AA535975 19p13.3 Hs.515046 10

zinc ion transmembrane transporter activity

ion transport

zinc ion transport

zinc ion binding

membrane

integral to membrane

metal ion transport

metal ion transmembrane transporter activity

 
204564_at 0.198 5.426 2.262 3.875e-02 0.291 -3.943 PCGF3 polycomb group ring finger 3 4 689572 NM_006315 4p16.3 Hs.144309 Hs.707307 5

protein binding

zinc ion binding

regulation of transcription

metal ion binding

 
212282_at -0.417 6.889 -2.262 3.876e-02 0.291 -3.943 TMEM97 transmembrane protein 97 17 23670247 BF038366 17q11.2 Hs.199695 8

regulation of cell growth

molecular_function

cellular_component

membrane

integral to membrane

 
213428_s_at 0.478 8.445 2.262 3.876e-02 0.291 -3.944 COL6A1 collagen, type VI, alpha 1 21 46226090 AA292373 21q22.3 Hs.474053 49

molecular_function

protein binding

extracellular region

proteinaceous extracellular matrix

collagen type VI

cell adhesion

sarcolemma

Focal adhesion

ECM-receptor interaction

227964_at 0.247 5.711 2.261 3.882e-02 0.291 -3.945 FRMD8 FERM domain containing 8 11 64910616 BF435621 11q13 Hs.578433 4

binding

cytoskeleton

 
208828_at -0.527 7.970 -2.261 3.882e-02 0.291 -3.945 POLE3 polymerase (DNA directed), epsilon 3 (p17 subunit) 9 -115209341, -115209341 BC004170 9q33 Hs.108112 13

DNA-directed DNA polymerase activity

protein binding

intracellular

nucleus

DNA replication

transferase activity

nucleotidyltransferase activity

sequence-specific DNA binding

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

DNA replication

Base excision repair

Nucleotide excision repair

212503_s_at -0.413 8.215 -2.261 3.883e-02 0.291 -3.945 DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 10 -310131 N22859 10p15.3 Hs.432397 7

catalytic activity

nucleus

transcription factor binding

metabolic process

 
201377_at -0.207 6.980 -2.261 3.883e-02 0.291 -3.945 UBAP2L ubiquitin associated protein 2-like 1 152459278, 152459948 NM_014847 1q21.3 Hs.490551 12

protein binding

 
223492_s_at -0.328 9.417 -2.261 3.883e-02 0.291 -3.945 LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 2 238200962, 238265545, 238265545 BC004958 2q37.3 Hs.471779 16

DNA binding

double-stranded RNA binding

protein binding

nucleus

cytoplasm

cytoskeleton

regulation of transcription from RNA polymerase II promoter

negative regulation of transcription

transcription repressor activity

 
208851_s_at 0.270 5.591 2.261 3.884e-02 0.291 -3.945 THY1 Thy-1 cell surface antigen 11 -118793865 AL161958 11q22.3-q23 Hs.644697 Hs.719101 45

angiogenesis

Rho GTPase activator activity

integrin binding

protein binding

endoplasmic reticulum

cytosol

plasma membrane

integral to plasma membrane

negative regulation of protein kinase activity

cytoskeleton organization

external side of plasma membrane

cell-cell adhesion

negative regulation of cell migration

dendrite

growth cone

anchored to membrane

anchored to external side of plasma membrane

GPI anchor binding

positive regulation of GTPase activity

membrane raft

retinal cone cell development

focal adhesion formation

negative regulation of axonogenesis

negative regulation of T cell receptor signaling pathway

positive regulation of T cell activation

positive regulation of release of sequestered calcium ion into cytosol

Leukocyte transendothelial migration

226618_at -0.489 7.177 -2.261 3.884e-02 0.291 -3.945 FLJ25076 probable ubiquitin-conjugating enzyme E2 FLJ25076 5 6501735 AW572911 5p15.31 Hs.126856 3

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

 
205277_at -0.321 6.129 -2.261 3.885e-02 0.291 -3.946 PRDM2 PR domain containing 2, with ZNF domain 1 13899321, 13903936, 13903936, 13948462 NM_012231 1p36.21 Hs.371823 39

transcription factor activity

intracellular

nucleus

Golgi apparatus

regulation of transcription, DNA-dependent

methyltransferase activity

zinc ion binding

transferase activity

histone-lysine N-methyltransferase activity

metal ion binding

 
1557954_at -0.317 5.050 -2.261 3.886e-02 0.291 -3.946 CXorf15 chromosome X open reading frame 15 X 16714480 BM757251 Xp22.2 Hs.555961 8    
228805_at -0.551 6.242 -2.261 3.886e-02 0.291 -3.946 C5orf25 chromosome 5 open reading frame 25 5 175597975 BF116060 5q35.2 Hs.653052 Hs.715124 4    
202688_at 0.663 7.513 2.261 3.886e-02 0.291 -3.946 TNFSF10 tumor necrosis factor (ligand) superfamily, member 10 3 -173706157 NM_003810 3q26 Hs.478275 343

cytokine activity

tumor necrosis factor receptor binding

extracellular region

extracellular space

soluble fraction

integral to plasma membrane

induction of apoptosis

immune response

signal transduction

cell-cell signaling

zinc ion binding

activation of pro-apoptotic gene products

membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

metal ion binding

Cytokine-cytokine receptor interaction

Apoptosis

Natural killer cell mediated cytotoxicity

220160_s_at 0.231 6.548 2.260 3.887e-02 0.291 -3.946 KPTN kaptin (actin binding protein) 19 -52670211 NM_007059 19q13.32 Hs.25441 11

actin binding

protein binding

nucleus

cytoplasm

microtubule organizing center

cell motion

actin filament organization

sensory perception of sound

actin cytoskeleton

growth cone

stereocilium

cell projection

perinuclear region of cytoplasm

 
224922_at -0.246 5.925 -2.260 3.887e-02 0.291 -3.946 CSNK2A2 casein kinase 2, alpha prime polypeptide 16 -56749312 AI022089 16q21 Hs.82201 143

nucleotide binding

protein serine/threonine kinase activity

ATP binding

protein amino acid phosphorylation

Wnt receptor signaling pathway

transferase activity

protein N-terminus binding

regulation of cell cycle

Wnt signaling pathway

Adherens junction

Tight junction

204659_s_at -0.339 6.746 -2.260 3.888e-02 0.291 -3.946 GFER growth factor, augmenter of liver regeneration 16 1974150 AF124604 16p13.3-p13.12 Hs.27184 30

protein binding

cellular_component

mitochondrion

spermatogenesis

cell proliferation

oxidoreductase activity

thiol oxidase activity

oxidation reduction

 
206503_x_at 0.254 4.526 2.260 3.893e-02 0.291 -3.947 PML promyelocytic leukemia 15 72074066, 72074066, 72074066 NM_002675 15q22 Hs.526464 208

response to hypoxia

DNA binding

intracellular

insoluble fraction

nucleus

nucleoplasm

nucleolus

cytoplasm

protein complex assembly

induction of apoptosis

activation of caspase activity

DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest

cell cycle arrest

transforming growth factor beta receptor signaling pathway

common-partner SMAD protein phosphorylation

SMAD protein nuclear translocation

cell aging

zinc ion binding

negative regulation of cell proliferation

response to UV

response to gamma radiation

nuclear matrix

negative regulation of transcription

negative regulation of angiogenesis

PML body

myeloid cell differentiation

negative regulation of cell growth

transcription regulator activity

PML body organization

ubiquitin protein ligase binding

nuclear membrane

response to cytokine stimulus

DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis

protein homodimerization activity

interspecies interaction between organisms

regulation of MHC class I biosynthetic process

SMAD binding

metal ion binding

retinoic acid receptor signaling pathway

maintenance of protein location in nucleus

Ubiquitin mediated proteolysis

Pathways in cancer

Acute myeloid leukemia

222696_at -0.543 7.022 -2.259 3.896e-02 0.291 -3.948 AXIN2 axin 2 17 -60955146 BF684446 17q23-q24 Hs.156527 38

somitogenesis

intramembranous ossification

signal transducer activity

protein binding

intracellular

nucleus

cytoplasm

signal transduction

multicellular organismal development

negative regulation of cell proliferation

regulation of Wnt receptor signaling pathway

negative regulation of osteoblast differentiation

Wnt signaling pathway

Pathways in cancer

Colorectal cancer

Endometrial cancer

Basal cell carcinoma

232042_at 0.199 4.581 2.259 3.897e-02 0.291 -3.948 TTYH2 tweety homolog 2 (Drosophila) 17 69721290, 69756099 BC005168 17q25.1 Hs.27935 8

ion channel activity

chloride channel activity

calcium ion binding

protein binding

plasma membrane

ion transport

integral to membrane

chloride ion binding

chloride channel complex

 
226658_at -0.367 4.837 -2.259 3.898e-02 0.291 -3.948 PDPN podoplanin 1 13782838, 13784553 AW590196 1p36.21 Hs.468675 48

cell morphogenesis

ruffle

lymphangiogenesis

plasma membrane

integral to plasma membrane

prostaglandin metabolic process

water transport

cell cycle

signal transduction

multicellular organismal development

cell proliferation

regulation of cell shape

folic acid transporter activity

amino acid transmembrane transporter activity

water channel activity

folic acid transport

cell-cell adhesion

lamellipodium

filopodium

positive regulation of cell migration

tube morphogenesis

lung alveolus development

 
230242_at 0.212 6.105 2.259 3.899e-02 0.291 -3.949 NFASC neurofascin homolog (chicken) 1 203064404, 203064404, 203179976 AA634220 1q32.1 Hs.13349 28

protein binding

plasma membrane

cell adhesion

integral to membrane

Cell adhesion molecules (CAMs)

230114_at 0.257 4.388 2.259 3.900e-02 0.291 -3.949 HOXB8 homeobox B8 17 -44044706 AI492162 17q21.3 Hs.514292 14

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

grooming behavior

adult locomotory behavior

anterior/posterior pattern formation

sensory perception of pain

dorsal spinal cord development

sequence-specific DNA binding

embryonic skeletal system morphogenesis

 
235508_at 0.211 5.918 2.259 3.901e-02 0.292 -3.949 PML promyelocytic leukemia 15 72074066, 72074066, 72074066 AW291023 15q22 Hs.526464 208

response to hypoxia

DNA binding

intracellular

insoluble fraction

nucleus

nucleoplasm

nucleolus

cytoplasm

protein complex assembly

induction of apoptosis

activation of caspase activity

DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest

cell cycle arrest

transforming growth factor beta receptor signaling pathway

common-partner SMAD protein phosphorylation

SMAD protein nuclear translocation

cell aging

zinc ion binding

negative regulation of cell proliferation

response to UV

response to gamma radiation

nuclear matrix

negative regulation of transcription

negative regulation of angiogenesis

PML body

myeloid cell differentiation

negative regulation of cell growth

transcription regulator activity

PML body organization

ubiquitin protein ligase binding

nuclear membrane

response to cytokine stimulus

DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis

protein homodimerization activity

interspecies interaction between organisms

regulation of MHC class I biosynthetic process

SMAD binding

metal ion binding

retinoic acid receptor signaling pathway

maintenance of protein location in nucleus

Ubiquitin mediated proteolysis

Pathways in cancer

Acute myeloid leukemia

226647_at 0.212 5.502 2.258 3.904e-02 0.292 -3.950 TMEM25 transmembrane protein 25 11 117907012, 117907012 AL562445 11q23.3 Hs.564188 9

extracellular region

plasma membrane

integral to membrane

 
226351_at 0.237 6.119 2.258 3.905e-02 0.292 -3.950 NSUN4 NOL1/NOP2/Sun domain family, member 4 1 46578976 AK021577 1p34 Hs.163424 4

methyltransferase activity

transferase activity

 
207980_s_at -0.839 4.817 -2.258 3.905e-02 0.292 -3.950 CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 6 -139735089 NM_006079 6q23.3 Hs.82071 21

negative regulation of transcription from RNA polymerase II promoter

nuclear chromatin

response to hypoxia

liver development

transcription factor activity

transcription coactivator activity

transcription corepressor activity

protein binding

nucleus

anti-apoptosis

determination of left/right symmetry

heart development

heart development

positive regulation of specific transcription from RNA polymerase II promoter

positive regulation of cell-cell adhesion

negative regulation of cell migration

positive regulation of transforming growth factor beta receptor signaling pathway

response to fluid shear stress

positive regulation of cell cycle

positive regulation of transcription, DNA-dependent

 
241791_at -0.394 11.361 -2.258 3.907e-02 0.292 -3.950 TTN titin 2 -179318289, -179098963 BF825274 2q31 Hs.134602 116

nucleotide binding

magnesium ion binding

condensed nuclear chromosome

protein serine/threonine kinase activity

Rho guanyl-nucleotide exchange factor activity

calcium ion binding

calmodulin binding

ATP binding

intracellular

nucleus

cytoplasm

protein amino acid phosphorylation

striated muscle contraction

mitotic chromosome condensation

structural constituent of muscle

transferase activity

Z disc

muscle thin filament assembly

muscle thick filament assembly

telethonin binding

regulation of Rho protein signal transduction

identical protein binding

protein self-association

sarcomere organization

regulation of protein kinase activity

cardiac muscle fiber development

regulation of catalytic activity

actin filament binding

alpha-actinin binding

response to calcium ion

cardiac myofibril assembly

cardiac muscle tissue morphogenesis

Hypertrophic cardiomyopathy (HCM)

222202_at -0.148 2.235 -2.258 3.907e-02 0.292 -3.951 LOC644213 glyceraldehyde-3-phosphate dehydrogenase pseudogene 1   AK024355 1p12 Hs.647686      
226568_at 0.403 5.193 2.258 3.908e-02 0.292 -3.951 FAM102B family with sequence similarity 102, member B 1 108904493 AI478747 1p13.3 Hs.200230 6    
244463_at -0.358 4.243 -2.258 3.908e-02 0.292 -3.951 ADAM23 ADAM metallopeptidase domain 23 2 207016612 AI879064 2q33 Hs.591643 13

metalloendopeptidase activity

integrin binding

protein binding

extracellular region

plasma membrane

integral to plasma membrane

proteolysis

cell adhesion

central nervous system development

zinc ion binding

 
1554045_at 0.180 3.826 2.257 3.910e-02 0.292 -3.951 ZNF24 zinc finger protein 24 18 -31166175 AF542097 18q12 Hs.514802 15

transcription factor activity

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

negative regulation of transcription

transcription repressor activity

metal ion binding

 
235283_at -0.348 4.842 -2.257 3.910e-02 0.292 -3.951 INTS6 integrator complex subunit 6 13 -50921621, -50833701 AA262171 13q14.12-q14.2 Hs.439440 13

transmembrane receptor activity

protein binding

nucleus

nucleolus

cytoskeleton

snRNA processing

integrator complex

 
236605_at 0.197 5.721 2.257 3.911e-02 0.292 -3.951 EIF3K eukaryotic translation initiation factor 3, subunit K 19 43801561 AA470798 19q13.2 Hs.314359 15

translation initiation factor activity

translation initiation factor activity

protein binding

nucleus

cytoplasm

cytosol

eukaryotic translation initiation factor 3 complex

regulation of translational initiation

ribosome binding

 
1555752_at -0.210 5.962 -2.257 3.911e-02 0.292 -3.952 STH saitohin 17 41432452 AY179170 17q21.1 Hs.661831 19

nucleus

cytoplasm

 
242441_at -0.324 5.294 -2.257 3.912e-02 0.292 -3.952 LOC646548 similar to ADAM metallopeptidase domain 21 preproprotein 14   AA608973 14q24.2        
222393_s_at -0.530 7.700 -2.257 3.912e-02 0.292 -3.952 NAT13 N-acetyltransferase 13 (GCN5-related) 3 -114920530 AU149868 3q13.2 Hs.596074 5

protein binding

cytoplasm

N-terminal protein amino acid acetylation

N-acetyltransferase activity

metabolic process

acyltransferase activity

transferase activity

 
218322_s_at 0.301 5.159 2.257 3.913e-02 0.292 -3.952 ACSL5 acyl-CoA synthetase long-chain family member 5 10 114123905, 114125012, 114125945 NM_016234 10q25.1-q25.2 Hs.11638 21

nucleotide binding

magnesium ion binding

long-chain-fatty-acid-CoA ligase activity

ATP binding

mitochondrion

mitochondrial outer membrane

peroxisome

endoplasmic reticulum

microsome

lipid metabolic process

fatty acid metabolic process

metabolic process

membrane

integral to membrane

ligase activity

Fatty acid metabolism

Metabolic pathways

PPAR signaling pathway

Adipocytokine signaling pathway

236721_at -0.296 3.935 -2.257 3.916e-02 0.292 -3.953 ALKBH1 alkB, alkylation repair homolog 1 (E. coli) 14 -77208501 AI922200 14q24.3 Hs.94542 6

DNA dealkylation

 
233204_at -0.304 4.249 -2.256 3.917e-02 0.292 -3.953 LOC728153 similar to FAM133B protein 5   AA115105 5q12.1 Hs.18564 Hs.664739 1    
203039_s_at 0.308 10.240 2.256 3.918e-02 0.292 -3.953 NDUFS1 NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase) 2 -206696047 NM_005006 2q33-q34 Hs.471207 16

NADH dehydrogenase activity

iron ion binding

protein binding

mitochondrion

mitochondrial inner membrane

mitochondrial respiratory chain complex I

mitochondrial respiratory chain complex I

mitochondrial intermembrane space

mitochondrial electron transport, NADH to ubiquinone

oxygen and reactive oxygen species metabolic process

transport

apoptosis

NADH dehydrogenase (ubiquinone) activity

NADH dehydrogenase (ubiquinone) activity

electron carrier activity

membrane

electron transport chain

ATP synthesis coupled electron transport

cellular respiration

ATP metabolic process

metal ion binding

2 iron, 2 sulfur cluster binding

4 iron, 4 sulfur cluster binding

regulation of mitochondrial membrane potential

respiratory chain

Oxidative phosphorylation

Metabolic pathways

Alzheimer's disease

Parkinson's disease

Huntington's disease

201370_s_at -0.478 7.643 -2.256 3.918e-02 0.292 -3.953 CUL3 cullin 3 2 -225043112 AU145232 2q36.2 Hs.372286 39

G1/S transition of mitotic cell cycle

protein binding

nucleus

Golgi apparatus

ubiquitin-dependent protein catabolic process

cell cycle arrest

cyclin catabolic process

positive regulation of cell proliferation

induction of apoptosis by intracellular signals

cullin-RING ubiquitin ligase complex

ubiquitin protein ligase binding

Ubiquitin mediated proteolysis

202954_at 0.209 4.464 2.256 3.918e-02 0.292 -3.953 UBE2C ubiquitin-conjugating enzyme E2C 20 43874661, 43875078 NM_007019 20q13.12 Hs.93002 33

nucleotide binding

ubiquitin-protein ligase activity

ATP binding

nucleoplasm

cytosol

ubiquitin-dependent protein catabolic process

cell cycle

spindle organization

mitosis

cyclin catabolic process

protein ubiquitination

ligase activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

positive regulation of exit from mitosis

phosphoinositide-mediated signaling

regulation of protein metabolic process

cell division

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Ubiquitin mediated proteolysis

210931_at -0.535 4.674 -2.256 3.918e-02 0.292 -3.953 RNF6 ring finger protein (C3H2C3 type) 6 13 -25684904, -25684904, -25684904 AF293342 13q12.2 Hs.136885 7

protein binding

cellular_component

biological_process

zinc ion binding

metal ion binding

 
231864_at -0.274 6.627 -2.256 3.922e-02 0.292 -3.954 ZNF33A zinc finger protein 33A 10 38339583 D31763 10p11.2 Hs.435774 8

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
221238_at -0.248 3.776 -2.256 3.923e-02 0.292 -3.954 NSBP1 nucleosomal binding protein 1 X -80255855 NM_030763 Xq13.3 Hs.282204 7

chromatin

DNA binding

chromatin binding

nucleus

nucleoplasm

nucleolus

regulation of transcription from RNA polymerase I promoter

transcription activator activity

 
212654_at -0.162 12.787 -2.256 3.923e-02 0.292 -3.954 TPM2 tropomyosin 2 (beta) 9 -35672922, -35671989, -35671989 AL566786 9p13.2-p13.1 Hs.300772 39

actin binding

cytoplasm

cytoskeleton

muscle thin filament tropomyosin

structural constituent of muscle

regulation of ATPase activity

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

1554018_at 0.340 2.390 2.256 3.924e-02 0.292 -3.954 GPNMB glycoprotein (transmembrane) nmb 7 23252840 BC011595 7p15 Hs.190495 24

osteoblast differentiation

integrin binding

integral to plasma membrane

cell adhesion

heparin binding

negative regulation of cell proliferation

membrane

cytoplasmic membrane-bounded vesicle

bone mineralization

melanosome

 
220961_s_at 0.287 5.737 2.256 3.924e-02 0.292 -3.954 TBRG4 transforming growth factor beta regulator 4 7 -45106223 NM_030900 7p14-p13 Hs.231411 13

G1 phase of mitotic cell cycle

protein kinase activity

protein binding

ATP binding

mitochondrion

apoptosis

cell cycle arrest

positive regulation of cell proliferation

 
225947_at 0.312 6.420 2.255 3.926e-02 0.292 -3.955 MYO19 myosin XIX 17 -31943030, -31925712, -31925711 AA994178 17q12 Hs.302051 3

nucleotide binding

motor activity

actin binding

ATP binding

cytoplasm

myosin complex

 
209763_at 0.537 7.134 2.255 3.927e-02 0.292 -3.955 CHRDL1 chordin-like 1 X -109803740, -109803740 AL049176 Xq23 Hs.496587 10

ossification

extracellular region

extracellular region

multicellular organismal development

nervous system development

cell differentiation

BMP signaling pathway

 
210452_x_at 0.245 4.717 2.255 3.929e-02 0.292 -3.955 CYP4F2 cytochrome P450, family 4, subfamily F, polypeptide 2 19 -15849833 D26480 19pter-p13.11 Hs.558423 35

monooxygenase activity

protein binding

endoplasmic reticulum

microsome

leukotriene metabolic process

electron carrier activity

membrane

heme binding

metal ion binding

leukotriene-B4 20-monooxygenase activity

oxidation reduction

Arachidonic acid metabolism

Metabolic pathways

219141_s_at 0.146 6.701 2.255 3.929e-02 0.292 -3.956 AMBRA1 autophagy/beclin-1 regulator 1 11 -46374539 NM_017749 11p11.2 Hs.654644 7

cytoplasm

autophagic vacuole

autophagy

multicellular organismal development

nervous system development

cell differentiation

cytoplasmic vesicle

 
203848_at -0.285 6.645 -2.254 3.932e-02 0.292 -3.956 AKAP8 A kinase (PRKA) anchor protein 8 19 -15325334 AL050160 19p13.1 Hs.719292 18

condensed chromosome

female pronucleus

DNA binding

intracellular

nucleus

nucleolus

mitosis

mitotic chromosome condensation

signal transduction

zinc ion binding

nuclear matrix

protein kinase binding

metal ion binding

 
214553_s_at -0.375 9.327 -2.254 3.932e-02 0.292 -3.956 ARPP19 cAMP-regulated phosphoprotein, 19kDa 15 -50626723 NM_006628 15q21.2 Hs.512908 10

receptor binding

cytoplasm

potassium channel regulator activity

positive regulation of gluconeogenesis

positive regulation of glucose import

 
200636_s_at 0.395 5.555 2.254 3.933e-02 0.292 -3.956 PTPRF protein tyrosine phosphatase, receptor type, F 1 43769133 NM_002840 1p34 Hs.272062 49

receptor activity

transmembrane receptor protein tyrosine phosphatase activity

protein binding

integral to plasma membrane

protein amino acid dephosphorylation

cell adhesion

transmembrane receptor protein tyrosine phosphatase signaling pathway

membrane

hydrolase activity

Cell adhesion molecules (CAMs)

Adherens junction

Insulin signaling pathway

232217_at 0.248 4.927 2.254 3.934e-02 0.292 -3.957 FAM26E family with sequence similarity 26, member E 6 116939500 AI292175 6q22.1 Hs.660142 4

membrane

integral to membrane

 
201937_s_at -0.284 7.390 -2.254 3.935e-02 0.293 -3.957 DNPEP aspartyl aminopeptidase 2 -219946423 NM_012100 2q35 Hs.258551 8

aminopeptidase activity

protein binding

cytoplasm

vacuole

proteolysis

peptide metabolic process

peptidase activity

metallopeptidase activity

zinc ion binding

metal ion binding

 
223458_at 0.238 5.198 2.254 3.937e-02 0.293 -3.957 SEZ6L2 seizure related 6 homolog (mouse)-like 2 16 -29789980 BC000567 16p11.2 Hs.6314 10

endoplasmic reticulum

plasma membrane

integral to membrane

 
231115_at -0.181 3.549 -2.254 3.937e-02 0.293 -3.957 POLH polymerase (DNA directed), eta 6 43651855 AI890529 6p21.1 Hs.655467 65

magnesium ion binding

DNA synthesis during DNA repair

damaged DNA binding

DNA-directed DNA polymerase activity

nucleus

nucleoplasm

nucleolus

cytoplasm

regulation of DNA repair

pyrimidine dimer repair

postreplication repair

response to DNA damage stimulus

response to UV-C

transferase activity

nucleotidyltransferase activity

 
234923_at -0.356 5.268 -2.253 3.941e-02 0.293 -3.958 GARNL1 GTPase activating Rap/RanGAP domain-like 1 14 -35077308 AK022988 14q13.2 Hs.113150 10

GTPase activator activity

intracellular

nucleus

cytoplasm

mitochondrion

regulation of small GTPase mediated signal transduction

 
229313_at -0.327 9.661 -2.253 3.942e-02 0.293 -3.958 ANO5 anoctamin 5 11 22171297 AA843962 11p14.3 Hs.154329 6

ion channel activity

chloride channel activity

calcium ion binding

endoplasmic reticulum

ion transport

membrane

integral to membrane

chloride ion binding

chloride channel complex

 
206373_at 0.473 6.810 2.253 3.945e-02 0.293 -3.959 ZIC1 Zic family member 1 (odd-paired homolog, Drosophila) 3 148609870 NM_003412 3q24 Hs.598590 Hs.647962 17

transcription factor activity

protein binding

intracellular

nucleus

cytoplasm

pattern specification process

brain development

behavior

zinc ion binding

regulation of smoothened signaling pathway

cell differentiation

inner ear morphogenesis

metal ion binding

 
207250_at -0.179 3.737 -2.253 3.945e-02 0.293 -3.959 SIX6 SIX homeobox 6 14 60045690 NM_007374 14q22.3-q23 Hs.194756 10

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

visual perception

organ morphogenesis

sequence-specific DNA binding

 
230957_at 0.208 4.080 2.253 3.947e-02 0.293 -3.959 PCDHB19P protocadherin beta 19 pseudogene 5 140599872 BE463846 5q31 Hs.570898 4    
201267_s_at -0.268 9.617 -2.252 3.949e-02 0.293 -3.960 PSMC3 proteasome (prosome, macropain) 26S subunit, ATPase, 3 11 -47396895 AL545523 11p12-p13 Hs.250758 57

nucleotide binding

proteasome complex

blastocyst development

transcription coactivator activity

transcription corepressor activity

protein binding

ATP binding

nucleus

cytoplasm

cytosol

hydrolase activity

nucleoside-triphosphatase activity

protein catabolic process

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

interspecies interaction between organisms

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

238799_at -0.238 3.277 -2.252 3.952e-02 0.293 -3.961 ATP5S ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s (factor B) 14 49848796, 49848796 BE968806 14q21.3 Hs.438489 12

mitochondrion

mitochondrial inner membrane

ATP biosynthetic process

ion transport

hydrogen ion transmembrane transporter activity

proton transport

membrane

proton-transporting ATP synthase complex, coupling factor F(o)

 
224822_at 0.241 6.747 2.252 3.953e-02 0.293 -3.961 DLC1 deleted in liver cancer 1 8 -13116452, -12985242, -12985242 AA524250 8p22 Hs.134296 48

neural tube closure

heart morphogenesis

GTPase activator activity

protein binding

intracellular

nucleus

cytoplasm

caveola

focal adhesion

induction of apoptosis

activation of caspase activity

signal transduction

negative regulation of cell proliferation

negative regulation of cell proliferation

regulation of cell shape

hindbrain morphogenesis

negative regulation of cell migration

negative regulation of cell migration

Rac GTPase activator activity

forebrain development

regulation of actin cytoskeleton organization

negative regulation of Rho protein signal transduction

positive regulation of protein amino acid dephosphorylation

SH2 domain binding

focal adhesion formation

negative regulation of stress fiber formation

 
1556133_s_at -0.176 2.976 -2.252 3.953e-02 0.293 -3.961 LOC100169752 hypothetical LOC100169752 10 127252929 BI559430 10q Hs.652647 1    
237373_at 0.159 3.485 2.252 3.954e-02 0.293 -3.961 RAB20 RAB20, member RAS oncogene family 13 -109973413 BE464359 13q34 Hs.719403 7

nucleotide binding

GTP binding

Golgi apparatus

small GTPase mediated signal transduction

protein transport

 
220507_s_at 0.220 5.284 2.251 3.956e-02 0.293 -3.961 UPB1 ureidopropionase, beta 22 23221250 NM_016327 22q11.2 Hs.474388 10

beta-ureidopropionase activity

beta-ureidopropionase activity

cytoplasm

cytosol

nitrogen compound metabolic process

zinc ion binding

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds

metal ion binding

Pyrimidine metabolism

beta-Alanine metabolism

Pantothenate and CoA biosynthesis

Drug metabolism - other enzymes

Metabolic pathways

203960_s_at 0.282 5.652 2.251 3.956e-02 0.293 -3.962 HSPB11 heat shock protein family B (small), member 11 1 -54159821 NM_016126 1p32.1-p33 Hs.525462 Hs.624686 9

response to stress

cell adhesion

 
203267_s_at -0.220 6.407 -2.251 3.957e-02 0.293 -3.962 DRG2 developmentally regulated GTP binding protein 2 17 17932007 BF223206 17p11.2 Hs.78582 12

nucleotide binding

GTP binding

intracellular

cytoplasm

signal transduction

 
212620_at 0.225 6.409 2.251 3.958e-02 0.293 -3.962 ZNF609 zinc finger protein 609 15 62578671 AW165979 15q22.31 Hs.595451 Hs.696256 Hs.719276 7

intracellular

nucleus

zinc ion binding

metal ion binding

 
227577_at -0.430 6.640 -2.250 3.963e-02 0.294 -3.963 EXOC8 exocyst complex component 8 1 -229535104 AI168350 1q42.2 Hs.356198 11

protein binding

cytoplasm

exocytosis

protein transport

growth cone

cell projection

 
1569722_s_at 0.161 3.782 2.250 3.963e-02 0.294 -3.963 LOC219731 hypothetical protein LOC219731 10   BC032757 10p14 Hs.585473 1    
220901_at -0.408 5.578 -2.250 3.963e-02 0.294 -3.963 GPR157 G protein-coupled receptor 157 1 -9087062 NM_024980 1p36.23 Hs.632367 5

G-protein coupled receptor activity

plasma membrane

G-protein coupled receptor protein signaling pathway

integral to membrane

 
229651_at 0.272 4.761 2.250 3.963e-02 0.294 -3.963 SEZ6 seizure related 6 homolog (mouse) 17 -24306072 H05303 17q11.2 Hs.21837 8

plasma membrane

integral to membrane

 
217465_at -0.322 3.667 -2.250 3.964e-02 0.294 -3.963 NCKAP1 NCK-associated protein 1 2 -183497849 AK001291 2q32 Hs.603732 20

protein binding

plasma membrane

apoptosis

central nervous system development

integral to membrane

cell projection

Regulation of actin cytoskeleton

225433_at -0.398 6.980 -2.250 3.965e-02 0.294 -3.964 GTF2A1 general transcription factor IIA, 1, 19/37kDa 14 -80716146, -80716146 AU144104 14q31.1 Hs.592334 Hs.593630 45

DNA binding

transcription coactivator activity

nucleus

nucleoplasm

transcription factor TFIIA complex

nucleolus

cytoplasm

transcription initiation from RNA polymerase II promoter

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

transcription factor binding

general RNA polymerase II transcription factor activity

TATA-binding protein binding

general transcription from RNA polymerase II promoter

regulation of transcription

protein heterodimerization activity

Basal transcription factors

1562739_at -0.253 4.150 -2.250 3.965e-02 0.294 -3.964 LOC285593 hypothetical LOC285593 5 172939251, 172939262 BC033564 5q35.2 Hs.409730 1    
224560_at 0.429 6.979 2.250 3.965e-02 0.294 -3.964 TIMP2 TIMP metallopeptidase inhibitor 2 17 -74360653 BF107565 17q25 Hs.633514 168

enzyme inhibitor activity

integrin binding

protein binding

extracellular region

basement membrane

enzyme activator activity

metalloendopeptidase inhibitor activity

negative regulation of cell proliferation

cell surface

regulation of cAMP metabolic process

regulation of MAPKKK cascade

regulation of neuron differentiation

 
234711_s_at 0.163 5.040 2.250 3.968e-02 0.294 -3.964 BCORL1 BCL6 co-repressor-like 1 X 128944349 AL136450 Xq25-q26.1 Hs.496748 Hs.504534 4

nucleus

chromatin modification

regulation of transcription

 
235682_s_at 0.221 4.998 2.250 3.968e-02 0.294 -3.964 HSPB7 heat shock 27kDa protein family, member 7 (cardiovascular) 1 -16213109 BF306676 1p36.23-p34.3 Hs.502612 7

response to unfolded protein

regulation of heart contraction

protein C-terminus binding

response to heat

 
215343_at 0.196 2.435 2.250 3.970e-02 0.294 -3.965 CCDC88C coiled-coil domain containing 88C 14 -90807419 AF070587 14q32.11 Hs.525536 7

regulation of protein amino acid phosphorylation

insoluble fraction

Wnt receptor signaling pathway

PDZ domain binding

protein destabilization

protein self-association

protein homooligomerization

 
238084_at 0.171 4.652 2.249 3.970e-02 0.294 -3.965 PCGF3 polycomb group ring finger 3 4 689572 AA187595 4p16.3 Hs.144309 Hs.707307 5

protein binding

zinc ion binding

regulation of transcription

metal ion binding

 
1568598_at 0.308 5.170 2.249 3.970e-02 0.294 -3.965 KAZALD1 Kazal-type serine peptidase inhibitor domain 1 10 102810988 BF434771 10q24.31 Hs.534859 Hs.632079 11

ossification

regulation of cell growth

insulin-like growth factor binding

extracellular region

interstitial matrix

multicellular organismal development

cell differentiation

extracellular matrix organization

 
214055_x_at -0.220 7.597 -2.249 3.971e-02 0.294 -3.965 BAT2D1 BAT2 domain containing 1 1 169721289 AW238632 1q23.3 Hs.494614 5    
205559_s_at 0.494 5.559 2.249 3.971e-02 0.294 -3.965 PCSK5 proprotein convertase subtilisin/kexin type 5 9 77695379 NM_006200 9q21.3 Hs.368542 40

kidney development

kidney development

renin secretion into blood stream

serine-type endopeptidase activity

extracellular region

extracellular space

Golgi apparatus

Golgi lumen

signal peptide processing

proteolysis

cell-cell signaling

heart development

embryo implantation

peptidase activity

anterior/posterior pattern formation

viral assembly, maturation, egress, and release

secretory granule

respiratory tube development

nerve growth factor processing

limb morphogenesis

cytokine biosynthetic process

peptide binding

peptide biosynthetic process

embryonic gut development

embryonic skeletal system development

 
226356_at 0.234 6.498 2.249 3.974e-02 0.294 -3.966 FAM73B family with sequence similarity 73, member B 9 130839073 AA535864 9q34.11 Hs.632693 3

membrane

integral to membrane

 
201317_s_at -0.181 10.083 -2.249 3.976e-02 0.294 -3.966 PSMA2 proteasome (prosome, macropain) subunit, alpha type, 2 7 -42922986 NM_002787 7p13 Hs.333786 48

threonine-type endopeptidase activity

protein binding

nucleus

cytoplasm

cytosol

proteasome core complex

ubiquitin-dependent protein catabolic process

peptidase activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

proteolysis involved in cellular protein catabolic process

Proteasome

227388_at -0.373 7.954 -2.249 3.977e-02 0.294 -3.966 TUSC1 tumor suppressor candidate 1 9 -25666386 AA479016 9p21.2 Hs.26268 Hs.606014 2    
221607_x_at 0.432 10.669 2.248 3.978e-02 0.294 -3.967 ACTG1 actin, gamma 1 17 -77091593 BC001920 17q25 Hs.514581 102

nucleotide binding

structural constituent of cytoskeleton

ATP binding

cytoplasm

cytoskeleton

cell motion

identical protein binding

response to calcium ion

Focal adhesion

Adherens junction

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Vibrio cholerae infection

Pathogenic Escherichia coli infection - EHEC

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

225102_at 0.275 8.181 2.248 3.979e-02 0.294 -3.967 MGLL monoglyceride lipase 3 -128890598, -128890598 BG168471 3q21.3 Hs.277035 15

lysophospholipase activity

lipid metabolic process

inflammatory response

hydrolase activity

acylglycerol lipase activity

Glycerolipid metabolism

Metabolic pathways

205977_s_at 0.234 4.696 2.248 3.980e-02 0.294 -3.967 EPHA1 EPH receptor A1 7 -142798327 NM_005232 7q34 Hs.89839 30

nucleotide binding

receptor activity

ephrin receptor activity

ATP binding

integral to plasma membrane

protein amino acid phosphorylation

signal transduction

transmembrane receptor protein tyrosine kinase signaling pathway

membrane

transferase activity

Axon guidance

218294_s_at -0.275 5.977 -2.248 3.981e-02 0.294 -3.967 NUP50 nucleoporin 50kDa 22 43938389, 43939215 AF267865 22q13.31 Hs.715672 15

protein binding

nucleus

nuclear pore

nucleoplasm

protein transport

membrane

intracellular transport

mRNA transport

intracellular protein transmembrane transport

 
219566_at -0.326 7.622 -2.248 3.983e-02 0.294 -3.968 PLEKHF1 pleckstrin homology domain containing, family F (with FYVE domain) member 1 19 34848166 NM_024310 19q12 Hs.466383 5

nucleus

cytoplasm

lysosome

apoptosis

induction of apoptosis

zinc ion binding

metal ion binding

perinuclear region of cytoplasm

 
203437_at -0.369 9.163 -2.248 3.984e-02 0.294 -3.968 TMEM11 transmembrane protein 11 17 -21041854 NM_003876 17p11.2 Hs.719186 4

molecular_function

protein binding

integral to plasma membrane

biological_process

membrane

 
221417_x_at 0.189 3.960 2.248 3.984e-02 0.294 -3.968 S1PR5 sphingosine-1-phosphate receptor 5 19 -10484622 NM_030760 19p13.2 Hs.501561 16

lysosphingolipid and lysophosphatidic acid receptor activity

receptor activity

G-protein coupled receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

integral to membrane

Neuroactive ligand-receptor interaction

211981_at 0.355 6.614 2.248 3.984e-02 0.294 -3.968 COL4A1 collagen, type IV, alpha 1 13 -109599310 NM_001845 13q34 Hs.17441 83

extracellular matrix structural constituent

binding

extracellular region

collagen

collagen type IV

Focal adhesion

ECM-receptor interaction

Pathways in cancer

Small cell lung cancer

235473_at 0.248 3.041 2.247 3.985e-02 0.294 -3.968 MED6 mediator complex subunit 6 14 -70120709 BF434383 14q24.2 Hs.497353 22

RNA polymerase II transcription factor activity

transcription coactivator activity

nucleus

RNA polymerase II transcription mediator activity

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

 
63305_at 0.234 6.646 2.247 3.988e-02 0.294 -3.969 PKNOX2 PBX/knotted 1 homeobox 2 11 124539768 D81792   Hs.719275 7

transcription factor activity

actin monomer binding

nucleus

cytoplasm

regulation of transcription from RNA polymerase II promoter

actin cytoskeleton

microtubule cytoskeleton

sequence-specific DNA binding

actin filament binding

 
223423_at 0.362 4.717 2.247 3.988e-02 0.294 -3.969 GPR160 G protein-coupled receptor 160 3 171238428 BC000181 3q26.2-q27 Hs.231320 4

receptor activity

G-protein coupled receptor activity

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

integral to membrane

 
224619_at -0.303 8.558 -2.247 3.990e-02 0.294 -3.969 CASC4 cancer susceptibility candidate 4 15 42368220 BE904551 15q15.3 Hs.512867 6

membrane

integral to membrane

 
1555068_at -0.214 2.704 -2.247 3.990e-02 0.294 -3.969 WNK1 WNK lysine deficient protein kinase 1 12 732485 BC021121 12p13.3 Hs.709894 51

nucleotide binding

molecular_function

protein serine/threonine kinase activity

protein kinase inhibitor activity

protein binding

ATP binding

cytoplasm

cytoplasm

protein amino acid phosphorylation

ion transport

protein kinase cascade

biological_process

transferase activity

regulation of cellular process

 
235911_at 0.240 5.235 2.247 3.992e-02 0.294 -3.969 LOC440995 hypothetical protein LOC440995 3   AI885815 3q29 Hs.662242 1    
52940_at -0.386 6.265 -2.247 3.992e-02 0.294 -3.970 SIGIRR single immunoglobulin and toll-interleukin 1 receptor (TIR) domain 11 -395715, -395715 AA085764 11p15.5 Hs.501624 13

negative regulation of cytokine-mediated signaling pathway

transmembrane receptor activity

protein binding

acute-phase response

signal transduction

membrane

integral to membrane

negative regulation of lipopolysaccharide-mediated signaling pathway

negative regulation of transcription factor activity

negative regulation of chemokine biosynthetic process

innate immune response

 
212640_at 0.376 5.977 2.246 3.997e-02 0.295 -3.971 PTPLB protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b 3 -124696052 AV712602 3q21.1 Hs.705480 5

protein binding

endoplasmic reticulum

membrane

integral to membrane

Biosynthesis of unsaturated fatty acids

205337_at 0.212 2.805 2.246 4.000e-02 0.295 -3.971 DCT dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2) 13 -93889841 AL139318 13q32 Hs.301865 41

dopachrome isomerase activity

copper ion binding

microsome

cytosol

melanin biosynthetic process from tyrosine

metabolic process

zinc ion binding

epidermis development

membrane

integral to membrane

oxidoreductase activity

isomerase activity

melanosome

metal ion binding

pigmentation during development

cell development

Tyrosine metabolism

Metabolic pathways

Melanogenesis

230702_at 0.214 5.194 2.245 4.001e-02 0.295 -3.971 C8orf16 chromosome 8 open reading frame 16 8   BE674736 8p23.1 Hs.660259 1    
218621_at 0.221 3.958 2.245 4.001e-02 0.295 -3.971 HEMK1 HemK methyltransferase family member 1 3 50581912 NM_016173 3p21.3 Hs.517987 Hs.599362 4

DNA binding

DNA methylation

protein amino acid methylation

N-methyltransferase activity

protein methyltransferase activity

transferase activity

methylation

Androgen and estrogen metabolism

Histidine metabolism

Tyrosine metabolism

Aminophosphonate metabolism

Selenoamino acid metabolism

1557783_at 0.196 4.767 2.245 4.003e-02 0.295 -3.972 LOC100133991 similar to hCG1995169 17 40681085, 40695340 BC031942 17q21.31 Hs.668927 2    
220539_at -0.386 6.761 -2.245 4.004e-02 0.295 -3.972 C10orf92 chromosome 10 open reading frame 92 10 -134471886 NM_017609 10q26.3 Hs.298038 6    
231859_at -0.243 4.943 -2.244 4.009e-02 0.295 -3.973 C14orf132 chromosome 14 open reading frame 132 14 95575414 AK025915 14q32.2 Hs.6434 6

membrane

integral to membrane

 
1569368_at 0.231 4.748 2.244 4.010e-02 0.295 -3.973 LOC283693 actin, gamma pseudogene 15   BC014481 15q25.2 Hs.560399 1    
212122_at -0.295 7.852 -2.244 4.012e-02 0.295 -3.974 RHOQ ras homolog gene family, member Q 2 46623370 AW771590 2p21 Hs.709193 27

nucleotide binding

GTPase activity

profilin binding

GTP binding

intracellular

cytoplasm

actin filament

plasma membrane

GTP catabolic process

small GTPase mediated signal transduction

insulin receptor signaling pathway

regulation of cell shape

positive regulation of specific transcription from RNA polymerase II promoter

cortical actin cytoskeleton organization

GBD domain binding

regulation of actin cytoskeleton organization

membrane raft

positive regulation of glucose import

positive regulation of filopodium assembly

regulation of establishment of protein localization

Insulin signaling pathway

206698_at -0.534 6.422 -2.244 4.013e-02 0.295 -3.974 XK X-linked Kx blood group (McLeod syndrome) X 37430051 NM_021083 Xp21.1 Hs.78919 24

transporter activity

protein binding

transport

amino acid transport

membrane

integral to membrane

 
236753_at 0.231 5.390 2.244 4.014e-02 0.295 -3.974 tcag7.1307 hypothetical LOC154822 7 158493805 BE297424 7q36.3 Hs.667767 Hs.718785 2    
220204_s_at 0.171 3.693 2.244 4.014e-02 0.295 -3.974 BMP8A bone morphogenetic protein 8a 1 39729904 NM_024732 1p34.3 Hs.472497 3

ossification

cytokine activity

extracellular region

extracellular space

multicellular organismal development

growth factor activity

cell differentiation

growth

cartilage development

Hedgehog signaling pathway

TGF-beta signaling pathway

226730_s_at -0.217 5.258 -2.244 4.015e-02 0.295 -3.975 USP37 ubiquitin specific peptidase 37 2 -219023217 BF789968 2q35 Hs.166068 13

ubiquitin thiolesterase activity

nucleus

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
212988_x_at 0.424 10.748 2.244 4.016e-02 0.295 -3.975 ACTG1 actin, gamma 1 17 -77091593 AL515810 17q25 Hs.514581 102

nucleotide binding

structural constituent of cytoskeleton

ATP binding

cytoplasm

cytoskeleton

cell motion

identical protein binding

response to calcium ion

Focal adhesion

Adherens junction

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Vibrio cholerae infection

Pathogenic Escherichia coli infection - EHEC

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

201803_at -0.206 9.216 -2.243 4.016e-02 0.295 -3.975 POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 4 57539865 NM_000938 4q12 Hs.602757 92

magnesium ion binding

nuclear mRNA splicing, via spliceosome

DNA binding

DNA-directed RNA polymerase activity

protein binding

nucleus

nucleoplasm

DNA-directed RNA polymerase II, core complex

transcription

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

zinc ion binding

transferase activity

nucleotidyltransferase activity

ribonucleoside binding

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

Huntington's disease

220065_at 0.821 3.920 2.243 4.016e-02 0.295 -3.975 TNMD tenomodulin X 99726445 NM_022144 Xq21.33-q23 Hs.132957 13

membrane

integral to membrane

 
201228_s_at -0.334 6.145 -2.243 4.016e-02 0.295 -3.975 ARIH2 ariadne homolog 2 (Drosophila) 3 48931284 AW074830 3p21.2-p21.3 Hs.633601 14

nucleic acid binding

protein binding

nucleus

ubiquitin-dependent protein catabolic process

multicellular organismal development

zinc ion binding

metal ion binding

 
208621_s_at 0.567 4.351 2.243 4.018e-02 0.295 -3.975 EZR ezrin 6 -159106760, -159106760 BF663141 6q25.2-q26 Hs.487027 158

ruffle

cytoplasm

cytosol

actin filament

plasma membrane

microvillus

cell cortex

cytoskeletal anchoring at plasma membrane

leukocyte adhesion

cytoskeletal protein binding

regulation of cell shape

extrinsic to membrane

membrane to membrane docking

filopodium

cortical cytoskeleton

apical part of cell

cell adhesion molecule binding

actin filament binding

actin filament bundle formation

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Pathogenic Escherichia coli infection - EHEC

204841_s_at -0.318 4.277 -2.243 4.019e-02 0.295 -3.975 EEA1 early endosome antigen 1 12 -91690415 NM_003566 12q22 Hs.567367 32

calmodulin binding

phosphatidylinositol binding

intracellular

membrane fraction

cytoplasm

early endosome

cytosol

serine-pyruvate aminotransferase complex

vesicle fusion

zinc ion binding

membrane

synaptic vesicle to endosome fusion

extrinsic to plasma membrane

GTP-dependent protein binding

protein homodimerization activity

early endosome to late endosome transport

metal ion binding

Endocytosis

241619_at -0.369 5.260 -2.243 4.021e-02 0.295 -3.976 CALM1 calmodulin 1 (phosphorylase kinase, delta) 14 89933125 BF526558 14q24-q31 Hs.282410 Hs.708270 181  

Calcium signaling pathway

Phosphatidylinositol signaling system

Vascular smooth muscle contraction

Long-term potentiation

Neurotrophin signaling pathway

Olfactory transduction

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Alzheimer's disease

Glioma

225026_at -0.288 4.401 -2.243 4.021e-02 0.295 -3.976 CHD6 chromodomain helicase DNA binding protein 6 20 -39464583 BF572029 20q12 Hs.371979 12

nucleotide binding

chromatin

DNA binding

chromatin binding

helicase activity

ATP binding

nucleus

chromatin assembly or disassembly

chromatin remodeling

regulation of transcription, DNA-dependent

nervous system development

ATP-dependent helicase activity

hydrolase activity

 
202010_s_at -0.214 6.534 -2.243 4.022e-02 0.295 -3.976 ZNF410 zinc finger protein 410 14 73423338 NM_021188 14q24.3 Hs.270869 9

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
227071_at 0.179 4.946 2.243 4.022e-02 0.295 -3.976 ZNF414 zinc finger protein 414 19 -8482216, -8481462 AI762558 19p13.2 Hs.515114 5

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
226313_at 0.229 4.719 2.242 4.025e-02 0.296 -3.977 C10orf35 chromosome 10 open reading frame 35 10 71060008 H49529 10q22.1 Hs.522992 5

protein binding

membrane

integral to membrane

 
224698_at -0.286 8.873 -2.242 4.026e-02 0.296 -3.977 ESYT2 extended synaptotagmin-like protein 2 7 -158216449 AB033054 7q36.3 Hs.490795 10

plasma membrane

integral to membrane

 
1555963_x_at 0.165 4.262 2.242 4.026e-02 0.296 -3.977 B3GNT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 2 231968578 CA503291 2q37.1 Hs.299329 4

Golgi apparatus

protein amino acid glycosylation

galactosyltransferase activity

membrane

integral to membrane

transferase activity, transferring glycosyl groups

Keratan sulfate biosynthesis

Metabolic pathways

201232_s_at -0.320 8.368 -2.242 4.027e-02 0.296 -3.977 PSMD13 proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 11 226807 NM_002817 11p15.5 Hs.134688 41

proteasome complex

protein binding

cytosol

proteasome regulatory particle

meiosis I

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

234539_at 0.163 5.005 2.242 4.027e-02 0.296 -3.977 ADARB1 adenosine deaminase, RNA-specific, B1 (RED1 homolog rat) 21 45318920 AK027227 21q22.3 Hs.474018 35

double-stranded RNA binding

adenosine deaminase activity

intracellular

mRNA processing

zinc ion binding

hydrolase activity

metal ion binding

 
218232_at 0.418 5.175 2.242 4.029e-02 0.296 -3.978 C1QA complement component 1, q subcomponent, A chain 1 22835704 NM_015991 1p36.12 Hs.632379 65

extracellular region

extracellular region

complement component C1 complex

cytoplasm

Golgi apparatus

complement activation, classical pathway

cell-cell signaling

innate immune response

Complement and coagulation cascades

Prion diseases

Systemic lupus erythematosus

217556_at -0.424 4.514 -2.242 4.029e-02 0.296 -3.978 CLCN4 chloride channel 4 X 10084984 W26966 Xp22.3 Hs.495674 17

nucleotide binding

ion channel activity

voltage-gated chloride channel activity

ATP binding

endosome

ion transport

chloride transport

antiporter activity

membrane

integral to membrane

chloride ion binding

 
205356_at -0.295 10.338 -2.242 4.029e-02 0.296 -3.978 USP13 ubiquitin specific peptidase 13 (isopeptidase T-3) 3 180853626 NM_003940 3q26.2-q26.3 Hs.175322 11

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

ubiquitin-dependent protein catabolic process

peptidase activity

zinc ion binding

metal ion binding

 
226827_at 0.178 3.631 2.242 4.030e-02 0.296 -3.978 TMEM165 transmembrane protein 165 4 55956846 AW665624 4q12 Hs.479766 6

membrane

integral to membrane

 
240375_at 0.239 4.874 2.242 4.030e-02 0.296 -3.978 PIGV phosphatidylinositol glycan anchor biosynthesis, class V 1 26987072 AI798773 1p36.11 Hs.259605 9

mannosyltransferase activity

mannosyltransferase activity

endoplasmic reticulum

endoplasmic reticulum membrane

membrane

integral to membrane

preassembly of GPI anchor in ER membrane

Glycosylphosphatidylinositol(GPI)-anchor biosynthesis

Metabolic pathways

203434_s_at 0.335 6.682 2.242 4.030e-02 0.296 -3.978 MME membrane metallo-endopeptidase 3 156280129, 156280398, 156280646, 156280772 AI433463 3q25.1-q25.2 Hs.307734 128

metalloendopeptidase activity

protein binding

plasma membrane

integral to plasma membrane

proteolysis

cell-cell signaling

peptidase activity

zinc ion binding

metal ion binding

Renin-angiotensin system

Hematopoietic cell lineage

Alzheimer's disease

239726_at -0.526 7.036 -2.242 4.031e-02 0.296 -3.978 ANK3 ankyrin 3, node of Ranvier (ankyrin G) 10 -61458164, -61458164 AI743588 10q21 Hs.499725 30

protein binding

cytoplasm

cytoskeleton

signal transduction

basolateral plasma membrane

establishment of protein localization

 
200637_s_at 0.184 3.668 2.242 4.031e-02 0.296 -3.978 PTPRF protein tyrosine phosphatase, receptor type, F 1 43769133 AI762627 1p34 Hs.272062 49

receptor activity

transmembrane receptor protein tyrosine phosphatase activity

protein binding

integral to plasma membrane

protein amino acid dephosphorylation

cell adhesion

transmembrane receptor protein tyrosine phosphatase signaling pathway

membrane

hydrolase activity

Cell adhesion molecules (CAMs)

Adherens junction

Insulin signaling pathway

215314_at -0.431 6.912 -2.241 4.032e-02 0.296 -3.978 ANK3 ankyrin 3, node of Ranvier (ankyrin G) 10 -61458164, -61458164 AU146646 10q21 Hs.499725 30

protein binding

cytoplasm

cytoskeleton

signal transduction

basolateral plasma membrane

establishment of protein localization

 
228383_at -0.293 5.970 -2.241 4.032e-02 0.296 -3.978 PNPLA7 patatin-like phospholipase domain containing 7 9 -139474225 AK024443 9q34.3 Hs.294147 6

nucleus

mitochondrion

lysosome

endoplasmic reticulum

microsome

lipid metabolic process

metabolic process

membrane

integral to membrane

hydrolase activity

 
1569077_x_at 0.232 6.206 2.241 4.033e-02 0.296 -3.979 ZNF836 zinc finger protein 836 19 -57349936 BE791720 19q13.41 Hs.631584 1

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
209559_at 0.251 6.732 2.241 4.034e-02 0.296 -3.979 HIP1R huntingtin interacting protein 1 related 12 121885991 AB013384 12q24 Hs.524815 Hs.714965 19

actin binding

protein binding

cytoplasm

coated pit

receptor-mediated endocytosis

biological_process

membrane

clathrin coated vesicle membrane

cytoplasmic vesicle

phosphoinositide binding

perinuclear region of cytoplasm

 
238367_s_at 0.216 4.475 2.241 4.035e-02 0.296 -3.979 C1orf228 chromosome 1 open reading frame 228 1 44912980 AW015512 1p34.1 Hs.173679 1

binding

 
223341_s_at -0.617 7.115 -2.241 4.035e-02 0.296 -3.979 SCOC short coiled-coil protein 4 141397889, 141484046, 141484064, 141514113 AF330205 4q31.1 Hs.480815 5

nucleus

Golgi apparatus

 
227464_at 0.206 5.127 2.240 4.040e-02 0.296 -3.980 ACSF3 acyl-CoA synthetase family member 3 16 87687754, 87687754, 87687754 AW025904 16q24.3 Hs.461727 6

nucleotide binding

ATP binding

mitochondrion

lipid metabolic process

fatty acid metabolic process

metabolic process

ligase activity

acid-thiol ligase activity

 
1553478_at 0.203 4.033 2.240 4.043e-02 0.296 -3.981 PRR10 proline rich 10 11   NM_173579 11q24.2 Hs.376015 3    
201871_s_at -0.367 8.718 -2.240 4.043e-02 0.296 -3.981 UBXN1 UBX domain protein 1 11 -62200547 NM_015853 11q12.3 Hs.351296 9

proteasome complex

cytoplasm

polyubiquitin binding

proteasomal ubiquitin-dependent protein catabolic process

ATPase binding

 
1552323_s_at 0.452 3.828 2.240 4.044e-02 0.296 -3.981 FAM122C family with sequence similarity 122C X 133768889 NM_138819 Xq26.3 Hs.269127 3    
1552924_a_at -0.179 4.051 -2.240 4.046e-02 0.296 -3.981 PITPNM2 phosphatidylinositol transfer protein, membrane-associated 2 12 -122033979 AL133612 12q24.31 Hs.272759 6

calcium ion binding

intracellular

transport

metabolic process

lipid binding

membrane

integral to membrane

intracellular membrane-bounded organelle

 
215389_s_at 0.328 6.013 2.240 4.046e-02 0.296 -3.981 TNNT2 troponin T type 2 (cardiac) 1 -199594764 X79857 1q32 Hs.533613 116

actin binding

tropomyosin binding

troponin complex

regulation of heart contraction

muscle filament sliding

troponin C binding

troponin I binding

negative regulation of ATPase activity

positive regulation of ATPase activity

response to calcium ion

ventricular cardiac muscle morphogenesis

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

1553279_at 0.298 6.739 2.239 4.047e-02 0.296 -3.982 BTNL9 butyrophilin-like 9 5 180399830 NM_152547 5q35.3 Hs.546502 4

membrane

integral to membrane

 
205308_at 0.225 5.909 2.239 4.049e-02 0.296 -3.982 FAM164A family with sequence similarity 164, member A 8 79740836 NM_016010 8q21.12 Hs.271876 6    
209119_x_at 0.277 6.400 2.239 4.050e-02 0.296 -3.982 NR2F2 nuclear receptor subfamily 2, group F, member 2 15 94670160, 94675114, 94676797, 94677572 AV703465 15q26 Hs.657455 27

transcription factor activity

ligand-regulated transcription factor activity

steroid hormone receptor activity

transcription corepressor activity

nucleus

regulation of transcription from RNA polymerase II promoter

lipid metabolic process

signal transduction

zinc ion binding

sequence-specific DNA binding

metal ion binding

 
212709_at -0.398 5.303 -2.239 4.051e-02 0.296 -3.983 NUP160 nucleoporin 160kDa 11 -47756245 D83781 11p11.2 Hs.643526 16

kinetochore

nucleocytoplasmic transporter activity

protein binding

nucleus

mRNA export from nucleus

protein transport

Nup107-160 complex

Nup107-160 complex

intracellular protein transmembrane transport

 
218448_at -0.300 6.705 -2.239 4.052e-02 0.296 -3.983 C20orf11 chromosome 20 open reading frame 11 20 61039885 NM_017896 20q13.33 Hs.353013 7

protein binding

nucleus

 
204959_at 0.332 4.125 2.239 4.053e-02 0.296 -3.983 MNDA myeloid cell nuclear differentiation antigen 1 157067791 NM_002432 1q22 Hs.153837 14

DNA binding

protein binding

nucleus

cytoplasm

cellular defense response

regulation of transcription

 
241644_at 0.208 5.210 2.238 4.056e-02 0.296 -3.984 BOLA2 bolA homolog 2 (E. coli) 16 -30111756, -29372414 AW770588 16p11.2 Hs.444600 Hs.655267 5    
217864_s_at -0.243 7.683 -2.238 4.057e-02 0.296 -3.984 PIAS1 protein inhibitor of activated STAT, 1 15 66133625 NM_016166 15q Hs.162458 67

DNA binding

transcription coactivator activity

transcription corepressor activity

nucleus

JAK-STAT cascade

zinc ion binding

nuclear speck

SUMO ligase activity

enzyme binding

modification-dependent protein catabolic process

androgen receptor signaling pathway

positive regulation of protein sumoylation

regulation of transcription

positive regulation of transcription, DNA-dependent

metal ion binding

androgen receptor binding

Ubiquitin mediated proteolysis

Jak-STAT signaling pathway

Pathways in cancer

Small cell lung cancer

213933_at 0.251 4.517 2.238 4.058e-02 0.296 -3.984 PTGER3 prostaglandin E receptor 3 (subtype EP3) 1 -71244124, -71209051, -71190702, -71090623 AW242315 1p31.2 Hs.445000 45

ligand-dependent nuclear receptor activity

G-protein coupled receptor activity

prostaglandin E receptor activity

nuclear envelope

plasma membrane

integral to plasma membrane

transcription, DNA-dependent

signal transduction

G-protein coupled receptor protein signaling pathway

cell death

Calcium signaling pathway

Neuroactive ligand-receptor interaction

1561687_a_at 0.305 2.935 2.238 4.059e-02 0.296 -3.984 ZNF382 zinc finger protein 382 19 41788060 BC038358 19q13.12 Hs.631591 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
236656_s_at -0.668 6.679 -2.238 4.061e-02 0.297 -3.985 LOC100130506 hypothetical protein LOC100130506 2   AW014647          
213932_x_at 0.443 10.701 2.238 4.063e-02 0.297 -3.985 HLA-A major histocompatibility complex, class I, A 6 30018309, 1358588, 1157055 AI923492 6p21.3 Hs.181244 Hs.713441 857

Golgi membrane

antigen processing and presentation of peptide antigen via MHC class I

protein binding

integral to plasma membrane

immune response

immune response

membrane

integral to membrane

antigen processing and presentation

early endosome membrane

MHC class I receptor activity

MHC class I protein complex

interspecies interaction between organisms

Endocytosis

Cell adhesion molecules (CAMs)

Antigen processing and presentation

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

203075_at -0.345 7.391 -2.237 4.064e-02 0.297 -3.985 SMAD2 SMAD family member 2 18 -43613464, -43613463, -43613463 AW151617 18q21.1 Hs.12253 Hs.705764 206

mesoderm formation

double-stranded DNA binding

transcription factor activity

intracellular

nucleus

nucleoplasm

cytoplasm

cytosol

SMAD protein complex assembly

intracellular signaling cascade

zygotic determination of dorsal/ventral axis

gastrulation

transcription factor binding

anterior/posterior pattern formation

positive regulation of epithelial to mesenchymal transition

promoter binding

transcription activator activity

regulation of transforming growth factor beta receptor signaling pathway

transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity

primary microRNA processing

ubiquitin protein ligase binding

activin responsive factor complex

type I transforming growth factor beta receptor binding

positive regulation of gene-specific transcription

cell fate commitment

negative regulation of transcription, DNA-dependent

positive regulation of transcription from RNA polymerase II promoter

paraxial mesoderm morphogenesis

regulation of binding

palate development

co-SMAD binding

R-SMAD binding

response to cholesterol

Cell cycle

Wnt signaling pathway

TGF-beta signaling pathway

Adherens junction

Pathways in cancer

Colorectal cancer

Pancreatic cancer

209580_s_at -0.433 6.790 -2.237 4.066e-02 0.297 -3.986 MBD4 methyl-CpG binding domain protein 4 3 -130632482 AF114784 3q21-q22 Hs.35947 34

DNA binding

satellite DNA binding

endodeoxyribonuclease activity

protein binding

nucleus

nucleolus

base-excision repair

response to DNA damage stimulus

hydrolase activity

depyrimidination

Base excision repair

227976_at 0.220 4.305 2.237 4.067e-02 0.297 -3.986 LOC644538 hypothetical protein LOC644538 X 133952633 AW242009 Xq26.3 Hs.42239 1    
207734_at 0.154 3.181 2.237 4.070e-02 0.297 -3.987 LAX1 lymphocyte transmembrane adaptor 1 1 202000906 NM_017773 1q32.1 Hs.272794 10

inactivation of MAPK activity

protein binding

cytoplasm

plasma membrane

immune response

intracellular signaling cascade

integral to membrane

protein kinase binding

B cell activation

SH2 domain binding

membrane raft

negative regulation of T cell activation

 
210895_s_at 0.186 4.144 2.236 4.071e-02 0.297 -3.987 CD86 CD86 molecule 3 123256910, 123279439 L25259 3q21 Hs.171182 97

protein binding

plasma membrane

immune response

cell-cell signaling

positive regulation of cell proliferation

coreceptor activity

integral to membrane

transcription activator activity

T cell activation

positive regulation of lymphotoxin A biosynthetic process

interspecies interaction between organisms

positive regulation of interleukin-2 biosynthetic process

positive regulation of interleukin-4 biosynthetic process

positive regulation of T-helper 2 cell differentiation

positive regulation of transcription

Cell adhesion molecules (CAMs)

Toll-like receptor signaling pathway

Type I diabetes mellitus

Autoimmune thyroid disease

Systemic lupus erythematosus

Allograft rejection

Graft-versus-host disease

1552347_at -0.278 6.518 -2.236 4.071e-02 0.297 -3.987 CRYZL1 crystallin, zeta (quinone reductase)-like 1 21 -33883517 NM_145311 21q21.3 Hs.352671 9

NADPH:quinone reductase activity

binding

cytosol

zinc ion binding

oxidoreductase activity

quinone cofactor metabolic process

NADP or NADPH binding

oxidation reduction

 
204191_at -0.253 4.908 -2.236 4.073e-02 0.297 -3.987 IFNAR1 interferon (alpha, beta and omega) receptor 1 21 33619083 NM_000629 21q22.1 21q22.11 Hs.529400 71

receptor activity

type I interferon receptor activity

protein binding

integral to plasma membrane

cell surface receptor linked signal transduction

JAK-STAT cascade

response to virus

membrane

positive regulation of interferon-gamma production

T cell activation

type I interferon biosynthetic process

Cytokine-cytokine receptor interaction

Toll-like receptor signaling pathway

Jak-STAT signaling pathway

Natural killer cell mediated cytotoxicity

226816_s_at -0.305 8.234 -2.236 4.075e-02 0.297 -3.988 KIAA1143 KIAA1143 3 -44765242 AI745170 3p21.31 Hs.476082 Hs.604937 6    
224299_x_at 0.209 5.439 2.236 4.075e-02 0.297 -3.988 FTCD formiminotransferase cyclodeaminase 21 -46381121, -46380603 AF289023 21q22.3 Hs.415846 11

folic acid binding

cytoplasm

Golgi apparatus

histidine metabolic process

folic acid and derivative metabolic process

transferase activity

lyase activity

glutamate formimidoyltransferase activity

formimidoyltetrahydrofolate cyclodeaminase activity

cellular metabolic process

Histidine metabolism

One carbon pool by folate

Metabolic pathways

218346_s_at -0.540 9.086 -2.236 4.075e-02 0.297 -3.988 SESN1 sestrin 1 6 -109414337 NM_014454 6q21 Hs.591336 6

nucleus

response to DNA damage stimulus

cell cycle arrest

negative regulation of cell proliferation

p53 signaling pathway

240199_x_at 0.217 5.890 2.236 4.075e-02 0.297 -3.988 ZNF345 zinc finger protein 345 19 42033106 AI016940 19q13.12 Hs.362324 5

negative regulation of transcription from RNA polymerase II promoter

DNA binding

specific RNA polymerase II transcription factor activity

RNA polymerase III transcription factor activity

intracellular

nucleus

regulation of transcription from RNA polymerase III promoter

zinc ion binding

regulation of transcription

metal ion binding

 
222217_s_at 0.195 5.431 2.236 4.076e-02 0.297 -3.988 SLC27A3 solute carrier family 27 (fatty acid transporter), member 3 1 152014391 BC003654 1q21.3 Hs.438723 7

nucleotide binding

mitochondrion

lipid metabolic process

fatty acid metabolic process

metabolic process

membrane

integral to membrane

ligase activity

 
203272_s_at -0.246 7.534 -2.236 4.076e-02 0.297 -3.988 TUSC2 tumor suppressor candidate 2 3 -50337344 BF308548 3p21.3 Hs.517981 11

protein binding

cell cycle

cell-cell signaling

cell proliferation

 
214507_s_at 0.211 7.021 2.236 4.076e-02 0.297 -3.988 EXOSC2 exosome component 2 9 132558978 NM_014285 9q34 Hs.654643 32

3'-5'-exoribonuclease activity

exosome (RNase complex)

exonuclease activity

protein binding

nucleus

nucleolus

cytoplasm

rRNA processing

7S RNA binding

hydrolase activity

RNA degradation

226901_at 0.318 6.607 2.236 4.077e-02 0.297 -3.988 C17orf58 chromosome 17 open reading frame 58 17 -63417678 AI214996 17q24.2 Hs.90790 2

protein binding

 
210285_x_at -0.255 7.560 -2.236 4.078e-02 0.297 -3.988 WTAP Wilms tumor 1 associated protein 6 160068141, 160068141, 160068609 BC000383 6q25-q27 Hs.446091 Hs.710715 16

nucleus

nucleolus

mRNA processing

cell cycle

RNA splicing

nuclear membrane

 
229356_x_at -0.203 7.655 -2.236 4.078e-02 0.297 -3.988 INO80 INO80 homolog (S. cerevisiae) 15 -39058370 AK002176 15q15.1 Hs.292949 12

nucleotide binding

DNA binding

DNA helicase activity

ATP binding

nucleus

chromatin remodeling

hydrolase activity

ATPase activity

 
1569452_at 0.308 4.043 2.235 4.082e-02 0.297 -3.989 LOC692247 hypothetical locus LOC692247 11   BG772667 11p15.5 Hs.560022 2    
201475_x_at 0.390 7.310 2.235 4.083e-02 0.297 -3.989 MARS methionyl-tRNA synthetase 12 56168117 NM_004990 12q13.2 Hs.632707 18

tRNA binding

nucleotide binding

methionine-tRNA ligase activity

protein binding

ATP binding

cytoplasm

plasma membrane

methionyl-tRNA aminoacylation

ligase activity

Selenoamino acid metabolism

Aminoacyl-tRNA biosynthesis

201201_at 0.429 9.750 2.235 4.085e-02 0.297 -3.990 CSTB cystatin B (stefin B) 21 -44018258 NM_000100 21q22.3 Hs.695 49

protease binding

cysteine-type endopeptidase inhibitor activity

protein binding

intracellular

nucleus

nucleolus

cytoplasm

adult locomotory behavior

negative regulation of peptidase activity

 
219041_s_at -0.245 9.126 -2.235 4.085e-02 0.297 -3.990 REPIN1 replication initiator 1 7 149696811, 149699190 NM_014374 7q36.1 Hs.647086 13

DNA binding

intracellular

nucleus

nuclear origin of replication recognition complex

DNA replication

zinc ion binding

metal ion binding

 
224439_x_at -0.218 9.441 -2.235 4.086e-02 0.297 -3.990 RNF7 ring finger protein 7 3 142939740 BC005966 3q22-q24 Hs.134623 25

copper ion binding

protein binding

nucleus

cytoplasm

anti-apoptosis

redox signal response

zinc ion binding

induction of apoptosis by oxidative stress

NEDD8 ligase activity

modification-dependent protein catabolic process

protein neddylation

metal ion binding

Ubiquitin mediated proteolysis

212969_x_at 0.239 5.102 2.234 4.087e-02 0.297 -3.990 EML3 echinoderm microtubule associated protein like 3 11 -62126266 BE222618 11q12.3 Hs.379785 8

protein binding

cytoplasm

microtubule

 
203645_s_at 0.644 5.290 2.234 4.087e-02 0.297 -3.990 CD163 CD163 molecule 12 -7514676 NM_004244 12p13.3 Hs.504641 51

scavenger receptor activity

protein binding

extracellular region

plasma membrane

integral to plasma membrane

acute-phase response

inflammatory response

 
215250_at 0.325 5.473 2.234 4.088e-02 0.297 -3.990 TMEM111 transmembrane protein 111 3 -9980635 AU147317 3p25.3 Hs.475392 6

molecular_function

cellular_component

biological_process

membrane

integral to membrane

 
240337_at 0.197 3.597 2.234 4.088e-02 0.297 -3.990 RHOA ras homolog gene family, member A 3 -49371582 AW173151 3p21.3 Hs.247077 Hs.709788 348

nucleotide binding

magnesium ion binding

cell morphogenesis

GTPase activity

protein binding

GTP binding

intracellular

nucleus

cytoplasm

cytoskeleton

plasma membrane

regulation of transcription from RNA polymerase II promoter

cell adhesion

cell-matrix adhesion

small GTPase mediated signal transduction

Rho protein signal transduction

skeletal muscle tissue development

myosin binding

actin cytoskeleton organization

cell differentiation

positive regulation of NF-kappaB import into nucleus

positive regulation of I-kappaB kinase/NF-kappaB cascade

negative regulation of neuron apoptosis

interspecies interaction between organisms

negative regulation of neuron differentiation

positive regulation of neuron differentiation

positive regulation of stress fiber formation

Chemokine signaling pathway

Vascular smooth muscle contraction

Wnt signaling pathway

TGF-beta signaling pathway

Axon guidance

Focal adhesion

Adherens junction

Tight junction

T cell receptor signaling pathway

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Regulation of actin cytoskeleton

Pathogenic Escherichia coli infection - EHEC

Pathways in cancer

228402_at 0.289 5.857 2.234 4.089e-02 0.297 -3.991 ZBED3 zinc finger, BED-type containing 3 5 -76408287 AI679968 5q13.3 Hs.584988 5

DNA binding

zinc ion binding

metal ion binding

 
230977_at 0.167 6.985 2.234 4.091e-02 0.297 -3.991 NPM2 nucleophosmin/nucleoplasmin 2 8 21938299 AI016313 8p21.3 Hs.131055 5

cytoplasmic chromatin

nuclear chromatin

nucleic acid binding

nucleus

chromatin remodeling

regulation of exit from mitosis

single fertilization

embryonic development

oocyte differentiation

histone binding

positive regulation of meiosis

 
1554241_at -0.522 7.411 -2.234 4.091e-02 0.297 -3.991 COCH coagulation factor C homolog, cochlin (Limulus polyphemus) 14 30413491 BC007230 14q12-q13 Hs.21016 31

extracellular region

proteinaceous extracellular matrix

sensory perception of sound

 
241172_at 0.175 3.852 2.234 4.091e-02 0.297 -3.991 GRIA2 glutamate receptor, ionotropic, AMPA 2 4 158361185, 158361269 AI939470 4q32-q33 Hs.32763 48

regulation of receptor recycling

receptor activity

alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity

ion channel activity

extracellular-glutamate-gated ion channel activity

protein binding

plasma membrane

ion transport

signal transduction

response to lithium ion

postsynaptic density

kainate selective glutamate receptor activity

integral to membrane

cell junction

PDZ domain binding

growth cone

synaptic vesicle membrane

receptor internalization

asymmetric synapse

presynaptic membrane

cell soma

dendritic spine

dendritic shaft

protein complex

establishment of protein localization

postsynaptic membrane

positive regulation of synaptic transmission

regulation of synaptic transmission, glutamatergic

Neuroactive ligand-receptor interaction

Long-term potentiation

Long-term depression

Amyotrophic lateral sclerosis (ALS)

244825_at 0.212 6.141 2.234 4.092e-02 0.297 -3.991 SHROOM4 shroom family member 4 X -50351386 AI005420 Xp11.22 Hs.420541 9

stress fiber

protein binding

cytoplasm

actin filament organization

multicellular organismal development

brain development

basal plasma membrane

apical plasma membrane

myosin II complex

cortical actin cytoskeleton

filamentous actin

cognition

actin filament binding

 
242114_at -0.335 5.000 -2.234 4.092e-02 0.297 -3.991 BOLA2 bolA homolog 2 (E. coli) 16 -30111756, -29372414 BF088991 16p11.2 Hs.444600 Hs.655267 5    
231579_s_at 0.510 8.185 2.234 4.093e-02 0.297 -3.991 TIMP2 TIMP metallopeptidase inhibitor 2 17 -74360653 BE968786 17q25 Hs.633514 168

enzyme inhibitor activity

integrin binding

protein binding

extracellular region

basement membrane

enzyme activator activity

metalloendopeptidase inhibitor activity

negative regulation of cell proliferation

cell surface

regulation of cAMP metabolic process

regulation of MAPKKK cascade

regulation of neuron differentiation

 
1556804_s_at 0.351 2.600 2.234 4.094e-02 0.297 -3.992 POLR3B polymerase (RNA) III (DNA directed) polypeptide B 12 105275565, 105275989 BC033542 12q23.3 Hs.610795 Hs.62696 8

DNA binding

DNA-directed RNA polymerase activity

nucleus

transcription

zinc ion binding

transferase activity

nucleotidyltransferase activity

ribonucleoside binding

metal ion binding

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

226869_at 0.204 4.422 2.233 4.097e-02 0.297 -3.992 MEGF6 multiple EGF-like-domains 6 1 -3394365 AI655611 1p36.3 Hs.593645 4

calcium ion binding

extracellular region

biological_process

 
220956_s_at 0.178 7.190 2.233 4.098e-02 0.297 -3.993 EGLN2 egl nine homolog 2 (C. elegans) 19 45996887, 45998020 NM_017555 19q13.2 Hs.515417 35

regulation of cell growth

response to hypoxia

nucleus

cytoplasm

ferrous iron binding

oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors

oxygen sensor activity

estrogen receptor signaling pathway

L-ascorbic acid binding

cell redox homeostasis

positive regulation of protein catabolic process

metal ion binding

oxidation reduction

 
238021_s_at -0.957 6.101 -2.233 4.098e-02 0.297 -3.993 CRNDE colorectal neoplasia differentially expressed (non-protein coding) 16   AA954994 16q12.2 Hs.237396 1    
201561_s_at 0.237 6.914 2.233 4.099e-02 0.297 -3.993 CLSTN1 calsyntenin 1 1 -9711665 NM_014944 1p36.22 Hs.29665 12

Golgi membrane

calcium ion binding

protein binding

nucleus

endoplasmic reticulum

Golgi apparatus

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

cell junction

cell projection

synapse

postsynaptic membrane

 
209157_at -0.363 8.941 -2.233 4.099e-02 0.297 -3.993 DNAJA2 DnaJ (Hsp40) homolog, subfamily A, member 2 16 -45546774 AF011793 16q12.1 Hs.368078 15

protein folding

zinc ion binding

positive regulation of cell proliferation

membrane

heat shock protein binding

metal ion binding

unfolded protein binding

 
210812_at 0.185 3.915 2.233 4.100e-02 0.297 -3.993 XRCC4 X-ray repair complementing defective repair in Chinese hamster cells 4 5 82409072 BC005259 5q13-q14 Hs.567359 93

condensed chromosome

in utero embryonic development

pro-B cell differentiation

DNA binding

nucleus

nucleus

cytosol

DNA-dependent protein kinase-DNA ligase 4 complex

double-strand break repair via nonhomologous end joining

double-strand break repair via nonhomologous end joining

double-strand break repair via nonhomologous end joining

response to DNA damage stimulus

central nervous system development

protein C-terminus binding

response to X-ray

response to gamma radiation

ligase activity

provirus integration

initiation of viral infection

DNA ligase IV complex

T cell differentiation in the thymus

immunoglobulin V(D)J recombination

negative regulation of neuron apoptosis

isotype switching

positive regulation of fibroblast proliferation

positive regulation of neurogenesis

DNA ligation during DNA repair

positive regulation of ligase activity

Non-homologous end-joining

205789_at -0.190 3.467 -2.233 4.101e-02 0.297 -3.993 CD1D CD1d molecule 1 156416360 NM_001766 1q22-q23 Hs.1799 84

receptor activity

lysosomal membrane

endosome

plasma membrane

integral to plasma membrane

endosome membrane

detection of bacterium

antigen processing and presentation

beta-2-microglobulin binding

exogenous lipid antigen binding

MHC class I protein complex

interspecies interaction between organisms

T cell selection

positive regulation of innate immune response

protein heterodimerization activity

antigen processing and presentation, endogenous lipid antigen via MHC class Ib

Hematopoietic cell lineage

237247_at 0.266 2.893 2.232 4.102e-02 0.297 -3.994 USP51 ubiquitin specific peptidase 51 X -55529686 AI341140 Xp11.21 Hs.134289 9

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

zinc ion binding

metal ion binding

 
218181_s_at -0.271 6.902 -2.232 4.104e-02 0.297 -3.994 MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 2 101680919 NM_017792 2q11.2-q12 Hs.719073 22

nucleotide binding

protein serine/threonine kinase activity

small GTPase regulator activity

ATP binding

cellular_component

protein amino acid phosphorylation

response to stress

protein kinase cascade

transferase activity

MAPK signaling pathway

236461_at 0.504 5.424 2.232 4.105e-02 0.297 -3.994 ABHD1 abhydrolase domain containing 1 2 27200160 AI554273 2p23.3 Hs.375791 6

molecular_function

carboxylesterase activity

biological_process

membrane

integral to membrane

hydrolase activity

 
226244_at 0.234 6.993 2.232 4.105e-02 0.297 -3.994 CLEC14A C-type lectin domain family 14, member A 14 -37793069 BF059395 14q21.1 Hs.525307 5

binding

sugar binding

membrane

integral to membrane

 
233844_at -0.224 4.600 -2.232 4.106e-02 0.297 -3.994 CD99L2 CD99 molecule-like 2 X -149685466 AK023776 Xq28 Hs.522805 8

protein binding

plasma membrane

cell adhesion

integral to membrane

cell junction

 
243602_at 0.204 3.058 2.232 4.106e-02 0.297 -3.994 MGC40069 hypothetical protein MGC40069 14   AI684979 14q11.2 Hs.369380 6    
211073_x_at 0.614 10.063 2.232 4.106e-02 0.297 -3.994 RPL3 ribosomal protein L3 22 -38038832 BC006483 22q13 Hs.119598 24

RNA binding

structural constituent of ribosome

protein binding

intracellular

nucleolus

cytoplasm

cytosol

ribosome

translational elongation

cytosolic large ribosomal subunit

Ribosome

1558711_at -0.233 5.749 -2.232 4.107e-02 0.297 -3.994 FAM13AOS FAM13A opposite strand (non-protein coding) 4 89849962 AI537367 4q22.1 Hs.715606 3    
238778_at -0.556 7.409 -2.232 4.107e-02 0.297 -3.994 MPP7 membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) 10 -28379928 AI244661 10p12.1 Hs.499159 5

protein binding

adherens junction

tight junction

membrane

cell junction

 
1552610_a_at -0.427 6.479 -2.232 4.107e-02 0.297 -3.994 JAK1 Janus kinase 1 1 -65071493 NM_002227 1p32.3-p31.3 Hs.207538 118

nucleotide binding

non-membrane spanning protein tyrosine kinase activity

Janus kinase activity

growth hormone receptor binding

protein binding

ATP binding

nucleus

cytoplasm

cytoskeleton

enzyme linked receptor protein signaling pathway

protein kinase cascade

membrane

transferase activity

peptidyl-tyrosine phosphorylation

cytokine-mediated signaling pathway

response to antibiotic

Jak-STAT signaling pathway

Pathways in cancer

Pancreatic cancer

1553757_at 0.220 5.085 2.232 4.110e-02 0.298 -3.995 IQCG IQ motif containing G 3 -199100344, -199100343 NM_032263 3q29 Hs.591675 6    
224599_at -0.360 8.419 -2.231 4.111e-02 0.298 -3.995 CGGBP1 CGG triplet repeat binding protein 1 3 -88183789 BF979809 3p12-p11.1 Hs.444818 14

DNA binding

double-stranded DNA binding

nucleus

regulation of transcription

 
214980_at -0.210 5.575 -2.231 4.112e-02 0.298 -3.996 UBE3A ubiquitin protein ligase E3A 15 -23133488, -23133488, -23133488 AF037219 15q11-q13 Hs.598862 76

ubiquitin-protein ligase activity

protein binding

intracellular

nucleus

cytosol

protein modification process

proteolysis

ubiquitin-dependent protein catabolic process

brain development

protein ubiquitination

ligase activity

acid-amino acid ligase activity

protein complex

interspecies interaction between organisms

Ubiquitin mediated proteolysis

214470_at 0.239 4.961 2.231 4.114e-02 0.298 -3.996 KLRB1 killer cell lectin-like receptor subfamily B, member 1 12 -9639136 NM_002258 12p13 Hs.169824 25

transmembrane receptor activity

binding

sugar binding

plasma membrane

cell surface receptor linked signal transduction

integral to membrane

 
205483_s_at 0.276 6.601 2.231 4.115e-02 0.298 -3.996 ISG15 ISG15 ubiquitin-like modifier 1 938709 NM_005101 1p36.33 Hs.458485 61

protein binding

extracellular region

extracellular space

cytoplasm

cell-cell signaling

response to virus

modification-dependent protein catabolic process

protein tag

ISG15-protein conjugation

interspecies interaction between organisms

RIG-I-like receptor signaling pathway

229441_at -0.338 5.489 -2.231 4.118e-02 0.298 -3.997 PRSS23 protease, serine, 23 11 86189138 AI569872 11q14.1 Hs.25338 13

serine-type endopeptidase activity

extracellular region

nucleus

proteolysis

peptidase activity

 
231899_at -0.416 7.558 -2.231 4.118e-02 0.298 -3.997 ZC3H12C zinc finger CCCH-type containing 12C 11 109469296 AB051513 11q22.3 Hs.376289 3

magnesium ion binding

endonuclease activity

zinc ion binding

hydrolase activity

 
221519_at -0.245 7.992 -2.230 4.119e-02 0.298 -3.997 FBXW4 F-box and WD repeat domain containing 4 10 -103360410 AF281859 10q24 Hs.500822 16

ubiquitin ligase complex

molecular_function

ubiquitin-dependent protein catabolic process

multicellular organismal development

Wnt receptor signaling pathway

embryonic limb morphogenesis

limb development

 
202171_at -0.436 8.387 -2.230 4.119e-02 0.298 -3.997 VEZF1 vascular endothelial zinc finger 1 17 -53403908 AU146275 17q22 Hs.463569 3

angiogenesis

endothelial cell development

DNA binding

specific RNA polymerase II transcription factor activity

intracellular

nucleus

regulation of transcription from RNA polymerase II promoter

cellular defense response

zinc ion binding

regulation of transcription

metal ion binding

 
37408_at 0.349 7.716 2.230 4.119e-02 0.298 -3.997 MRC2 mannose receptor, C type 2 17 58058493 AB014609 17q23.2 Hs.7835 23

receptor activity

binding

calcium ion binding

sugar binding

endocytosis

membrane

integral to membrane

 
204460_s_at -0.290 7.142 -2.230 4.120e-02 0.298 -3.997 RAD1 RAD1 homolog (S. pombe) 5 -34941124, -34941122 AF074717 5p13.2 Hs.38114 44

cell cycle checkpoint

DNA damage checkpoint

damaged DNA binding

protein binding

nucleus

DNA replication

DNA repair

response to DNA damage stimulus

meiotic prophase I

3'-5' exonuclease activity

3'-5' exonuclease activity

exodeoxyribonuclease III activity

hydrolase activity

 
240369_at 0.244 3.281 2.230 4.120e-02 0.298 -3.997 TTC7A tetratricopeptide repeat domain 7A 2 47021816 AW195569 2p21 Hs.370603 7

binding

 
200657_at 0.467 8.244 2.230 4.122e-02 0.298 -3.998 SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 X 118486390 NM_001152 Xq24-q26 Hs.632282 23

transporter activity

binding

mitochondrion

mitochondrial inner membrane

mitochondrial inner membrane

integral to plasma membrane

transport

adenine transmembrane transporter activity

membrane

mitochondrial nucleoid

interspecies interaction between organisms

Calcium signaling pathway

Parkinson's disease

Huntington's disease

202430_s_at 0.366 5.541 2.230 4.124e-02 0.298 -3.998 PLSCR1 phospholipid scramblase 1 3 -147715656 NM_021105 3q23 Hs.130759 34

calcium ion binding

protein binding

plasma membrane

response to virus

integral to membrane

phospholipid scrambling

SH3 domain binding

phospholipid scramblase activity

platelet activation

 
218238_at -0.382 6.646 -2.229 4.129e-02 0.298 -3.999 GTPBP4 GTP binding protein 4 10 1024348 NM_012341 10p15-p14 Hs.215766 10

regulation of cyclin-dependent protein kinase activity

nucleotide binding

GTPase activity

protein binding

GTP binding

nucleus

nucleolus

cytoplasm

negative regulation of DNA replication

negative regulation of cell proliferation

negative regulation of cell-cell adhesion

negative regulation of cell migration

negative regulation of protein ubiquitination

negative regulation of collagen binding

ribosome biogenesis

perinuclear region of cytoplasm

protein stabilization

 
1557642_at 0.171 2.092 2.229 4.132e-02 0.298 -4.000 LOC100129258 hypothetical protein LOC100129258 2   AK090907 2q37.2 Hs.591594 1    
215106_at 0.222 4.080 2.229 4.132e-02 0.298 -4.000 TTC22 tetratricopeptide repeat domain 22 1 -55022811, -55019339 AI923972 1p32.3 Hs.16230 3

binding

 
208699_x_at 0.346 4.963 2.229 4.133e-02 0.298 -4.000 TKT transketolase 3 -53234694, -53233763 BF696840 3p14.3 Hs.89643 24

transketolase activity

transketolase activity

calcium ion binding

protein binding

cytosol

metabolic process

transferase activity

regulation of growth

Pentose phosphate pathway

Carbon fixation in photosynthetic organisms

Biosynthesis of phenylpropanoids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of plant hormones

Metabolic pathways

1562209_at -0.244 3.275 -2.228 4.135e-02 0.299 -4.001 DCAF4L1 DDB1 and CUL4 associated factor 4-like 1 4 41678469 BU561160 4p13 Hs.213307 3    
1563111_a_at -0.327 6.583 -2.228 4.136e-02 0.299 -4.001 PIGX phosphatidylinositol glycan anchor biosynthesis, class X 3 197923642 AK000529 3q29 Hs.223296 6

endoplasmic reticulum

endoplasmic reticulum membrane

membrane

integral to membrane

preassembly of GPI anchor in ER membrane

Glycosylphosphatidylinositol(GPI)-anchor biosynthesis

Metabolic pathways

229277_at 0.287 4.517 2.228 4.138e-02 0.299 -4.001 ADRB1 adrenergic, beta-1-, receptor 10 115793795 T96352 10q24-q26 Hs.99913 184

positive regulation of heart rate by epinephrine-norepinephrine

positive regulation of the force of heart contraction by epinephrine-norepinephrine

diet induced thermogenesis

vasodilation by norepinephrine-epinephrine involved in regulation of systemic arterial blood pressure

receptor activity

G-protein coupled receptor activity

beta1-adrenergic receptor activity

protein binding

membrane fraction

plasma membrane

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

activation of adenylate cyclase activity by G-protein signaling pathway

response to cold

heat generation

negative regulation of multicellular organism growth

fear response

brown fat cell differentiation

Calcium signaling pathway

Neuroactive ligand-receptor interaction

Endocytosis

Gap junction

1560099_at -0.402 3.141 -2.228 4.139e-02 0.299 -4.001 LOC339260 hypothetical protein LOC339260 17   BC041488 17p11.2 Hs.661076 1    
204373_s_at -0.400 7.981 -2.228 4.139e-02 0.299 -4.001 CEP350 centrosomal protein 350kDa 1 178190530 NM_014810 1p36.13-q41 Hs.413045 17

nucleus

centrosome

spindle

 
221223_x_at -0.893 6.890 -2.228 4.140e-02 0.299 -4.001 CISH cytokine inducible SH2-containing protein 3 -50618889 NM_013324 3p21.3 Hs.655334 29

regulation of cell growth

molecular_function

protein binding

cellular_component

plasma membrane

activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway

intracellular signaling cascade

negative regulation of signal transduction

modification-dependent protein catabolic process

Jak-STAT signaling pathway

242006_at -0.246 3.691 -2.228 4.141e-02 0.299 -4.002 LCA5 Leber congenital amaurosis 5 6 -80251426, -80251426 AI379143 6q14.1 Hs.21945 10

cytoplasm

cytoskeleton

cilium

microtubule basal body

protein transport

cilium axoneme

 
208511_at 0.272 3.037 2.227 4.142e-02 0.299 -4.002 PTTG3P pituitary tumor-transforming 3 (pseudogene) 8 -67842185 NM_021000 8q13.1 Hs.647156 2

nucleus

cytoplasm

DNA metabolic process

SH3 domain binding

chromosome organization

 
220120_s_at 0.249 2.656 2.227 4.144e-02 0.299 -4.002 EPB41L4A erythrocyte membrane protein band 4.1 like 4A 5 -111526213 NM_022140 5q22.1-q22.2 Hs.584954 7

binding

cellular_component

cytoplasm

cytoskeleton

cytoskeletal protein binding

biological_process

extrinsic to membrane

 
221913_at 0.161 6.733 2.227 4.145e-02 0.299 -4.003 SIRT3 sirtuin (silent mating type information regulation 2 homolog) 3 (S. cerevisiae) 11 -205029 AI492888 11p15.5 Hs.716456 21

NAD+ ADP-ribosyltransferase activity

protein binding

cytoplasm

mitochondrion

mitochondrial matrix

chromatin silencing

protein amino acid ADP-ribosylation

protein amino acid deacetylation

zinc ion binding

membrane

hydrolase activity

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides

regulation of transcription

metal ion binding

NAD binding

 
226678_at 0.242 6.434 2.227 4.146e-02 0.299 -4.003 UNC13D unc-13 homolog D (C. elegans) 17 -71334901 BG054744 17q25.1 Hs.41045 21

granuloma formation

germinal center formation

cytoplasm

exocytosis

phagocytosis

membrane

natural killer cell degranulation

defense response to virus

 
227604_at -0.225 5.431 -2.227 4.146e-02 0.299 -4.003 LOC151146 hypothetical protein LOC151146 2   BG292251 2q14.2 Hs.593852 2    
1555332_at -0.247 2.884 -2.227 4.146e-02 0.299 -4.003 TPH2 tryptophan hydroxylase 2 12 70618892 AY098914 12q21.1 Hs.376337 112

tryptophan 5-monooxygenase activity

iron ion binding

serotonin biosynthetic process from tryptophan

aromatic amino acid family metabolic process

amino acid binding

metal ion binding

oxidation reduction

Tryptophan metabolism

Biosynthesis of alkaloids derived from shikimate pathway

Metabolic pathways

241762_at -1.012 8.173 -2.227 4.147e-02 0.299 -4.003 FBXO32 F-box protein 32 8 -124584538, -124584538 BF244402 8q24.13 Hs.403933 17

protein binding

modification-dependent protein catabolic process

 
225113_at -0.383 6.104 -2.226 4.151e-02 0.299 -4.004 AGPS alkylglycerone phosphate synthase 2 177965716 BF688144 2q31.2 Hs.516543 19

peroxisome

peroxisomal membrane

cytosol

alkylglycerone-phosphate synthase activity

lipid biosynthetic process

membrane

oxidoreductase activity

transferase activity

FAD binding

Ether lipid metabolism

Metabolic pathways

203098_at -0.276 6.865 -2.226 4.152e-02 0.299 -4.004 CDYL chromodomain protein, Y-like 6 4651391, 4721678, 4781330, 4835224 AL050164 6p25.1 Hs.269092 8

chromatin

chromatin binding

histone acetyltransferase activity

nucleus

chromatin assembly or disassembly

spermatogenesis

metabolic process

acyltransferase activity

transferase activity

regulation of transcription

 
219718_at 0.418 7.890 2.226 4.153e-02 0.299 -4.004 FGGY FGGY carbohydrate kinase domain containing 1 59535212 NM_018291 1p32.1 Hs.444301 7

molecular_function

cellular_component

carbohydrate metabolic process

kinase activity

transferase activity

phosphotransferase activity, alcohol group as acceptor

neuron maintenance

 
205251_at -0.759 7.774 -2.226 4.153e-02 0.299 -4.004 PER2 period homolog 2 (Drosophila) 2 -238817417 NM_022817 2q37.3 Hs.58756 46

signal transducer activity

protein binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

signal transduction

circadian rhythm

Circadian rhythm - mammal

213994_s_at 0.166 2.463 2.226 4.154e-02 0.299 -4.005 SPON1 spondin 1, extracellular matrix protein 11 13940489 AI885290 11p15.2 Hs.705394 15

protein binding

extracellular region

proteinaceous extracellular matrix

cell adhesion

 
239615_at 0.398 5.816 2.226 4.155e-02 0.299 -4.005 SLC22A5 solute carrier family 22 (organic cation/carnitine transporter), member 5 5 131733299 AI768445 5q31 Hs.443572 89

nucleotide binding

protein binding

ATP binding

plasma membrane

ion transport

sodium ion transport

ion transmembrane transporter activity

carnitine transporter activity

carnitine transporter activity

drug transporter activity

symporter activity

quaternary ammonium group transport

carnitine transport

carnitine transport

drug transport

integral to membrane

apical plasma membrane

PDZ domain binding

sodium ion binding

brush border membrane

brush border membrane

quorum sensing during interaction with host

positive regulation of intestinal epithelial structure maintenance

sodium-dependent organic cation transport

 
218940_at -0.600 6.340 -2.226 4.156e-02 0.299 -4.005 C14orf138 chromosome 14 open reading frame 138 14 -49645099 NM_024558 14q21.3 Hs.558541 3    
202551_s_at -0.748 7.320 -2.226 4.157e-02 0.299 -4.005 CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 2 36436900 BG546884 2p21 Hs.699247 9

regulation of cell growth

enzyme inhibitor activity

serine-type endopeptidase inhibitor activity

insulin-like growth factor receptor activity

insulin-like growth factor binding

extracellular region

plasma membrane

nervous system development

integral to membrane

 
226653_at 0.289 4.608 2.225 4.160e-02 0.299 -4.006 MARK1 MAP/microtubule affinity-regulating kinase 1 1 218768190 AB040910 1q41 Hs.497806 27

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

ATP binding

cytoplasm

protein amino acid phosphorylation

cytoskeleton organization

protein kinase cascade

microtubule cytoskeleton

transferase activity

 
205542_at 0.427 5.099 2.225 4.161e-02 0.299 -4.006 STEAP1 six transmembrane epithelial antigen of the prostate 1 7 89621624 NM_012449 7q21 Hs.61635 12

transporter activity

iron ion binding

copper ion binding

endosome

plasma membrane

integral to plasma membrane

cell-cell junction

ion transport

iron ion transport

electron carrier activity

channel activity

oxidoreductase activity

electron transport chain

metal ion binding

FAD binding

 
244128_x_at 0.254 5.599 2.225 4.161e-02 0.299 -4.006 GLIS1 GLIS family zinc finger 1 1 -53744493 AA872588 1p32.3 Hs.306691 6

negative regulation of transcription from RNA polymerase II promoter

DNA binding

specific RNA polymerase II transcription factor activity

intracellular

nucleus

nucleolus

cytoplasm

zinc ion binding

positive regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

 
221739_at 0.185 6.780 2.224 4.166e-02 0.299 -4.007 C19orf10 chromosome 19 open reading frame 10 19 -4608556 AL524093 19p13.3 Hs.465645 10

protein binding

extracellular region

ER-Golgi intermediate compartment

growth factor activity

positive regulation of cell proliferation

 
205364_at 0.704 5.675 2.224 4.167e-02 0.299 -4.007 ACOX2 acyl-Coenzyme A oxidase 2, branched chain 3 -58465903 NM_003500 3p14.3 Hs.444959 6

acyl-CoA dehydrogenase activity

acyl-CoA oxidase activity

peroxisome

lipid metabolic process

fatty acid metabolic process

fatty acid beta-oxidation

bile acid metabolic process

electron carrier activity

3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA 24-hydroxylase activity

FAD binding

oxidation reduction

Primary bile acid biosynthesis

Metabolic pathways

PPAR signaling pathway

1557801_x_at -0.238 5.674 -2.224 4.167e-02 0.299 -4.007 C11orf31 chromosome 11 open reading frame 31 11 57265297 AF085883 11q12.1 Hs.655373 Hs.719147 6

selenium binding

cell redox homeostasis

 
226734_at -0.398 6.631 -2.224 4.167e-02 0.299 -4.007 EIF4E2 eukaryotic translation initiation factor 4E family member 2 2 233123600 AW242220 2q37.1 Hs.292026 Hs.700929 15

RNA cap binding

translation initiation factor activity

protein binding

cytoplasm

translational initiation

regulation of translation

mTOR signaling pathway

Insulin signaling pathway

216913_s_at -0.530 5.758 -2.224 4.168e-02 0.299 -4.008 RRP12 ribosomal RNA processing 12 homolog (S. cerevisiae) 10 -99106448 AK021460 10q24.1 Hs.434251 15

protein binding

nucleus

nucleolus

membrane

integral to membrane

 
200938_s_at 0.194 4.865 2.224 4.169e-02 0.299 -4.008 RERE arginine-glutamic acid dipeptide (RE) repeats 1 -8335050, -8335050 AI920976 1p36.2-p36.1 Hs.463041 17

histone deacetylase complex

transcription factor activity

nucleus

chromatin remodeling

regulation of transcription, DNA-dependent

NLS-bearing substrate import into nucleus

multicellular organismal development

poly-glutamine tract binding

zinc ion binding

sequence-specific DNA binding

metal ion binding

 
201550_x_at 0.416 10.689 2.224 4.170e-02 0.299 -4.008 ACTG1 actin, gamma 1 17 -77091593 NM_001614 17q25 Hs.514581 102

nucleotide binding

structural constituent of cytoskeleton

ATP binding

cytoplasm

cytoskeleton

cell motion

identical protein binding

response to calcium ion

Focal adhesion

Adherens junction

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Vibrio cholerae infection

Pathogenic Escherichia coli infection - EHEC

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

239952_at -0.264 5.603 -2.224 4.170e-02 0.299 -4.008 ZEB1 zinc finger E-box binding homeobox 1 10 31647429, 31647717, 31647752, 31648106, 31650069 AI743662 10p11.2 Hs.124503 52

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

transcription coactivator activity

transcription corepressor activity

intracellular

nucleus

immune response

zinc ion binding

cell proliferation

sequence-specific DNA binding

metal ion binding

 
214467_at 0.182 3.833 2.224 4.171e-02 0.299 -4.008 GPR65 G protein-coupled receptor 65 14 87541248 NM_003608 14q31-q32.1 Hs.513440 10

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

apoptosis

immune response

signal transduction

G-protein coupled receptor protein signaling pathway

multicellular organismal development

 
220731_s_at 0.222 6.082 2.223 4.174e-02 0.300 -4.009 NECAP2 NECAP endocytosis associated 2 1 16639753 NM_018090 1p36.13 Hs.437385 Hs.710158 16

intracellular

plasma membrane

coated pit

endocytosis

protein transport

clathrin vesicle coat

cytoplasmic vesicle

 
211520_s_at 0.159 2.247 2.223 4.175e-02 0.300 -4.009 GRIA1 glutamate receptor, ionotropic, AMPA 1 5 152850276 M64752 5q31.1 5q33 Hs.519693 58

receptor activity

ion channel activity

extracellular-glutamate-gated ion channel activity

membrane fraction

endoplasmic reticulum

plasma membrane

ion transport

signal transduction

synaptic transmission

kainate selective glutamate receptor activity

integral to membrane

cell junction

alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex

synapse

postsynaptic membrane

Neuroactive ligand-receptor interaction

Long-term potentiation

Long-term depression

Amyotrophic lateral sclerosis (ALS)

223592_s_at -0.332 6.890 -2.223 4.178e-02 0.300 -4.010 RNF135 ring finger protein 135 17 26322081 BC005084 17q11.2 Hs.29874 12

protein binding

zinc ion binding

metal ion binding

 
204766_s_at 0.228 5.959 2.223 4.179e-02 0.300 -4.010 NUDT1 nudix (nucleoside diphosphate linked moiety X)-type motif 1 7 2248382, 2248421, 2249065 NM_002452 7p22 Hs.534331 46

GTPase activity

protein binding

cytoplasm

DNA repair

response to oxidative stress

8-oxo-7,8-dihydroguanine triphosphatase activity

hydrolase activity

 
223703_at 0.400 5.384 2.223 4.180e-02 0.300 -4.010 C10orf11 chromosome 10 open reading frame 11 10 77212524 AF267860 10q22.2-q22.3 Hs.118161 2

protein binding

 
201925_s_at -0.445 8.141 -2.223 4.181e-02 0.300 -4.010 CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 1 205561439 NM_000574 1q32 Hs.126517 118

soluble fraction

plasma membrane

integral to plasma membrane

complement activation, classical pathway

elevation of cytosolic calcium ion concentration

anchored to membrane

innate immune response

membrane raft

respiratory burst

Complement and coagulation cascades

Hematopoietic cell lineage

210823_s_at 0.269 5.292 2.222 4.182e-02 0.300 -4.010 PTPRS protein tyrosine phosphatase, receptor type, S 19 -5156518 U40317 19p13.3 Hs.644384 23

receptor activity

transmembrane receptor protein tyrosine phosphatase activity

protein binding

integral to plasma membrane

protein amino acid dephosphorylation

cell adhesion

membrane

hydrolase activity

 
209974_s_at -0.295 7.931 -2.222 4.183e-02 0.300 -4.011 BUB3 budding uninhibited by benzimidazoles 3 homolog (yeast) 10 124903749 AF047473 10q26 Hs.418533 28

kinetochore

protein binding

nucleus

nucleolus

cytosol

mitosis

mitotic cell cycle checkpoint

cell proliferation

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Cell cycle

213547_at -0.244 10.366 -2.222 4.183e-02 0.300 -4.011 CAND2 cullin-associated and neddylation-dissociated 2 (putative) 3 12813170 AB014567 3p25.2 Hs.343664 7

intracellular

nucleus

transcription activator activity

TATA-binding protein binding

modification-dependent protein catabolic process

regulation of transcription

 
226221_at -0.340 6.172 -2.222 4.183e-02 0.300 -4.011 KIAA1432 KIAA1432 9 5619326, 5646582 AL138104 9p24.1 Hs.211520 5

membrane

integral to membrane

 
1555715_a_at -0.203 5.464 -2.222 4.183e-02 0.300 -4.011 HRH3 histamine receptor H3 20 -60223411 AF346903 20q13.33 Hs.251399 26

receptor activity

G-protein coupled receptor activity

histamine receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein signaling, coupled to cyclic nucleotide second messenger

negative regulation of adenylate cyclase activity

neurotransmitter secretion

Neuroactive ligand-receptor interaction

212656_at 0.247 8.024 2.222 4.185e-02 0.300 -4.011 TSFM Ts translation elongation factor, mitochondrial 12 56462802 AF110399 12q13-q14 Hs.632704 10

transcription elongation regulator activity

translation elongation factor activity

intracellular

nucleus

mitochondrion

translational elongation

 
231517_at 0.233 4.146 2.222 4.185e-02 0.300 -4.011 ZYG11A zyg-11 homolog A (C. elegans) 1 53080770 AW243917 1p32.3 Hs.658458 1

binding

modification-dependent protein catabolic process

 
200645_at 0.216 11.131 2.222 4.187e-02 0.300 -4.012 GABARAP GABA(A) receptor-associated protein 17 -7084461 NM_007278 17p13.1 Hs.647421 38

Golgi membrane

microtubule cytoskeleton organization

autophagic vacuole membrane

protein binding

cytoplasm

lysosome

smooth endoplasmic reticulum

Golgi apparatus

microtubule

microtubule associated complex

plasma membrane

protein targeting

synaptic transmission

microtubule binding

protein transport

actin cytoskeleton

beta-tubulin binding

GABA receptor binding

Regulation of autophagy

204601_at -0.310 5.473 -2.222 4.187e-02 0.300 -4.012 N4BP1 NEDD4 binding protein 1 16 -47130137 NM_014664 16q12.1 Hs.511839 6

nucleus

 
222737_s_at -0.226 8.053 -2.222 4.188e-02 0.300 -4.012 BRD7 bromodomain containing 7 16 -48910441 AI674162 16q12 Hs.437894 22

nucleus

cytoplasm

regulation of transcription from RNA polymerase II promoter

transcription factor binding

Wnt receptor signaling pathway

histone binding

 
219455_at -0.227 5.015 -2.222 4.188e-02 0.300 -4.012 C7orf63 chromosome 7 open reading frame 63 7 89712423 NM_024788 7q21.13 Hs.657403 4

binding

 
212200_at -0.435 5.090 -2.222 4.189e-02 0.300 -4.012 ANKLE2 ankyrin repeat and LEM domain containing 2 12 -131812326 AK025933 12q24.33 Hs.654628 8

nuclear envelope

membrane

integral to membrane

 
206719_at -0.238 3.779 -2.221 4.191e-02 0.300 -4.012 SYNGR4 synaptogyrin 4 19 53559468 NM_012451 19q13.3 Hs.408333 3

membrane

integral to membrane

 
217836_s_at -0.434 8.058 -2.221 4.191e-02 0.300 -4.012 YY1AP1 YY1 associated protein 1 1 -153895869, -153895856 NM_018253 1q22 Hs.584927 19

protein binding

nucleus

cytoplasm

 
212484_at -0.351 8.556 -2.221 4.192e-02 0.300 -4.013 FAM89B family with sequence similarity 89, member B 11 65096395 BF974389 11q23 Hs.25723 7    
210645_s_at -0.335 8.391 -2.221 4.192e-02 0.300 -4.013 TTC3 tetratricopeptide repeat domain 3 21 37367440, 37377116 D83077 21q22.2 Hs.368214 9

protein binding

cellular_component

vacuole

biological_process

zinc ion binding

negative regulation of cell morphogenesis involved in differentiation

negative regulation of neuron differentiation

metal ion binding

response to protein stimulus

 
221816_s_at 0.306 7.470 2.221 4.193e-02 0.300 -4.013 PHF11 PHD finger protein 11 13 48967801, 48968528 BF055474 13q14.2 Hs.369039 17

protein binding

zinc ion binding

metal ion binding

 
232842_at -0.213 3.868 -2.221 4.194e-02 0.300 -4.013 DOCK8 dedicator of cytokinesis 8 9 204864 AL161725 9p24.3 Hs.132599 11

guanyl-nucleotide exchange factor activity

GTP binding

GTPase binding

 
232599_at 0.550 4.447 2.220 4.198e-02 0.300 -4.014 EXOC6 exocyst complex component 6 10 94584449, 94598204 AF220217 10q23.33 Hs.655657 8

exocyst

vesicle docking during exocytosis

protein transport

 
212628_at -0.401 6.376 -2.220 4.201e-02 0.300 -4.014 PKN2 protein kinase N2 1 88922509 BG292065 1p22.2 Hs.440833 32

nucleotide binding

protein kinase C activity

ATP binding

intracellular

nucleus

cytoplasm

protein amino acid phosphorylation

signal transduction

transferase activity

 
224740_at -0.359 6.749 -2.220 4.202e-02 0.300 -4.015 C5orf43 chromosome 5 open reading frame 43 5 -60489292 BE613001 5q12.1 Hs.508479 2

membrane

integral to membrane

 
204606_at 0.196 5.920 2.220 4.203e-02 0.300 -4.015 CCL21 chemokine (C-C motif) ligand 21 9 -34699001 NM_002989 9p13 Hs.57907 54

extracellular region

extracellular space

chemotaxis

inflammatory response

immune response

signal transduction

cell-cell signaling

chemokine activity

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

202964_s_at -0.272 6.547 -2.220 4.203e-02 0.300 -4.015 RFX5 regulatory factor X, 5 (influences HLA class II expression) 1 -149579739 NM_000449 1q21 Hs.632472 27

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

Antigen processing and presentation

Primary immunodeficiency

1560339_s_at -0.339 7.722 -2.220 4.204e-02 0.300 -4.015 NAP1L4 nucleosome assembly protein 1-like 4 11 -2922235 AK095320 11p15.5 Hs.501684 Hs.695395 12

nucleus

chromatin assembly complex

cytoplasm

nucleosome assembly

unfolded protein binding

 
233662_at -0.164 1.986 -2.220 4.205e-02 0.300 -4.015 CDH26 cadherin-like 26 20 57966876, 58004823 AL109928 20q13.2-q13.33 Hs.54973 4

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

integral to membrane

 
220524_at 0.206 4.628 2.220 4.205e-02 0.300 -4.015 EPB41L4B erythrocyte membrane protein band 4.1 like 4B 9 -111041832, -110974074 NM_024823 9q31-q32 Hs.591901 4

structural constituent of cytoskeleton

binding

cytoplasm

cytoskeleton

cytoskeletal protein binding

extrinsic to membrane

 
231757_at -0.187 4.804 -2.219 4.210e-02 0.301 -4.016 TAS2R5 taste receptor, type 2, member 5 7 141136485 NM_018980 7q31.3-q32 Hs.675370 16

receptor activity

signal transduction

G-protein coupled receptor protein signaling pathway

chemosensory behavior

taste receptor activity

membrane

integral to membrane

response to stimulus

sensory perception of taste

Taste transduction

229750_at 0.224 6.359 2.219 4.210e-02 0.301 -4.016 POU2F2 POU class 2 homeobox 2 19 -47284505 BF510728 19q13.2 Hs.654420 37

transcription factor activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

humoral immune response

sequence-specific DNA binding

 
228758_at -1.339 8.403 -2.219 4.210e-02 0.301 -4.016 BCL6 B-cell CLL/lymphoma 6 3 -188921858, -188921858, -188921858 AW264036 3q27 Hs.478588 139

protein import into nucleus, translocation

negative regulation of transcription from RNA polymerase II promoter

cell morphogenesis

negative regulation of cell-matrix adhesion

regulation of germinal center formation

negative regulation of T-helper 2 type immune response

negative regulation of B cell apoptosis

transcription factor activity

protein binding

intracellular

nucleus

replication fork

response to DNA damage stimulus

spermatogenesis

protein localization

zinc ion binding

negative regulation of cell proliferation

transcription repressor activity

transcription repressor activity

actin cytoskeleton organization

B cell differentiation

negative regulation of cell growth

positive regulation of B cell proliferation

chromatin DNA binding

regulation of Rho GTPase activity

negative regulation of mast cell cytokine production

negative regulation of Rho protein signal transduction

positive regulation of apoptosis

negative regulation of apoptosis

regulation of memory T cell differentiation

sequence-specific DNA binding

regulation of transcription

negative regulation of cell differentiation

negative regulation of T-helper 2 cell differentiation

negative regulation of S phase of mitotic cell cycle

metal ion binding

negative regulation of isotype switching to IgE isotypes

erythrocyte development

regulation of inflammatory response

positive regulation of cell motion

 
204966_at 0.234 4.693 2.219 4.212e-02 0.301 -4.017 BAI2 brain-specific angiogenesis inhibitor 2 1 -31965304 NM_001703 1p35 Hs.524138 11

plasma membrane

neuropeptide signaling pathway

integral to membrane

integral to membrane

brain-specific angiogenesis inhibitor activity

brain-specific angiogenesis inhibitor activity

 
217371_s_at -0.521 4.247 -2.219 4.212e-02 0.301 -4.017 IL15 interleukin 15 4 142777203 Y09908 4q31 Hs.654378 180

signal transducer activity

cytokine activity

cytokine receptor binding

protein binding

extracellular region

extracellular space

membrane fraction

nucleus

cytoplasm

endosome

Golgi apparatus

integral to plasma membrane

immune response

signal transduction

cell-cell signaling

positive regulation of cell proliferation

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

204445_s_at 0.243 4.289 2.218 4.215e-02 0.301 -4.017 ALOX5 arachidonate 5-lipoxygenase 10 45189634 AI361850 10q11.2 Hs.89499 141

arachidonate 5-lipoxygenase activity

iron ion binding

calcium ion binding

protein binding

nucleus

nuclear envelope lumen

cytoplasm

cytosol

inflammatory response

membrane

lipoxygenase activity

nuclear matrix

oxidoreductase activity

leukotriene biosynthetic process

nuclear membrane

oxidation reduction

Arachidonic acid metabolism

Linoleic acid metabolism

Metabolic pathways

210150_s_at 0.197 6.357 2.218 4.218e-02 0.301 -4.018 LAMA5 laminin, alpha 5 20 -60317515 BC003355 20q13.2-q13.3 Hs.473256 61

receptor binding

structural molecule activity

extracellular region

basement membrane

laminin-1 complex

regulation of cell adhesion

regulation of cell migration

substrate adhesion-dependent cell spreading

laminin-10 complex

laminin-11 complex

regulation of embryonic development

Focal adhesion

ECM-receptor interaction

Pathways in cancer

Small cell lung cancer

221526_x_at -0.337 7.257 -2.218 4.218e-02 0.301 -4.018 PARD3 par-3 partitioning defective 3 homolog (C. elegans) 10 -34440102 AW452651 10p11.21 Hs.131489 40

protein binding

cytoplasm

plasma membrane

tight junction

tight junction

cell cortex

protein complex assembly

cell cycle

establishment or maintenance of cell polarity

activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway

axonogenesis

asymmetric cell division

cell junction

Chemokine signaling pathway

Neuroactive ligand-receptor interaction

Endocytosis

Adherens junction

Tight junction

1555304_a_at 0.184 3.399 2.218 4.218e-02 0.301 -4.018 KCNH5 potassium voltage-gated channel, subfamily H (eag-related), member 5 14 -62248710, -62243697 AF493798 14q23.1 Hs.27043 12

two-component sensor activity

two-component signal transduction system (phosphorelay)

voltage-gated ion channel activity

voltage-gated potassium channel activity

calmodulin binding

regulation of transcription, DNA-dependent

ion transport

potassium ion transport

membrane

integral to membrane

potassium ion binding

 
243579_at 0.323 7.449 2.218 4.219e-02 0.301 -4.018 MSI2 musashi homolog 2 (Drosophila) 17 52688929, 52689372 BF029215 17q22 Hs.658922 7

nucleotide binding

RNA binding

cytoplasm

 
235067_at -0.364 6.451 -2.218 4.219e-02 0.301 -4.018 MKLN1 muskelin 1, intracellular mediator containing kelch motifs 7 130445394, 130663134 D81987 7q32 Hs.44693 13

protein binding

cytoplasm

signal transduction

 
219652_s_at 0.197 5.679 2.218 4.220e-02 0.301 -4.018 CXorf36 chromosome X open reading frame 36 X -44906499, -44892561 NM_024689 Xp11.3 Hs.98321 8

extracellular region

 
203694_s_at -0.235 7.166 -2.218 4.222e-02 0.301 -4.019 DHX16 DEAH (Asp-Glu-Ala-His) box polypeptide 16 6 -30728885, -2069456, -1867754 NM_003587 6p21.3 Hs.485060 9

nucleotide binding

nucleic acid binding

RNA helicase activity

ATP binding

nucleus

mRNA processing

ATP-dependent helicase activity

RNA splicing

hydrolase activity

 
218962_s_at 0.195 6.525 2.217 4.222e-02 0.301 -4.019 TMEM168 transmembrane protein 168 7 -112193022 NM_022484 7q31.32 Hs.709689 7

membrane

integral to membrane

transport vesicle

 
243851_at -0.232 3.233 -2.217 4.223e-02 0.301 -4.019 RAB3GAP2 RAB3 GTPase activating protein subunit 2 (non-catalytic) 1 -218388232 AI860647 1q41 Hs.654849 Hs.708165 14

GTPase activator activity

protein binding

soluble fraction

cytoplasm

intracellular protein transport

regulation of GTPase activity

protein heterodimerization activity

 
227562_at -0.500 7.106 -2.217 4.223e-02 0.301 -4.019 MAPKSP1 MAPK scaffold protein 1 4 -101018517 AI335267 4q23 Hs.716375 22

activation of MAPKK activity

protein binding

late endosome

membrane

kinase activator activity

MAPK signaling pathway

232087_at 0.262 4.906 2.217 4.225e-02 0.301 -4.019 CXorf23 chromosome X open reading frame 23 X -19844038 AW628045 Xp22.12 Hs.28896 2

mitochondrion

 
210889_s_at 0.474 4.702 2.217 4.225e-02 0.301 -4.020 FCGR2B Fc fragment of IgG, low affinity IIb, receptor (CD32) 1 159899563 M31933 1q23 Hs.654395 95

receptor activity

protein binding

plasma membrane

plasma membrane

immune response

signal transduction

integral to membrane

IgG binding

interspecies interaction between organisms

B cell receptor signaling pathway

Fc gamma R-mediated phagocytosis

Systemic lupus erythematosus

235351_at 0.188 2.624 2.217 4.225e-02 0.301 -4.020 TTLL7 tubulin tyrosine ligase-like family, member 7 1 -84107644 BF966240 1p31.1 Hs.445826 7

tubulin-tyrosine ligase activity

cilium

microtubule basal body

protein modification process

multicellular organismal development

nervous system development

ligase activity

cell differentiation

dendrite

perikaryon

 
203690_at -0.432 6.280 -2.217 4.226e-02 0.301 -4.020 TUBGCP3 tubulin, gamma complex associated protein 3 13 -112187328 NM_006322 13q34 Hs.224152 8

structural constituent of cytoskeleton

protein binding

cytoplasm

centriole

polar microtubule

microtubule

microtubule nucleation

gamma-tubulin binding

 
239100_x_at -0.324 4.597 -2.217 4.227e-02 0.301 -4.020 PCNX pecanex homolog (Drosophila) 14 70443874 W03928 14q24.2 Hs.446559 10

membrane

integral to membrane

 
1558537_x_at 0.291 4.908 2.217 4.230e-02 0.301 -4.020 ZNF844 zinc finger protein 844 19 12036545 AK098117 19p13.2 Hs.646391 2

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
222487_s_at -0.329 7.105 -2.216 4.231e-02 0.301 -4.021 RPS27L ribosomal protein S27-like 15 -61232591 BC003667 15q22.2 Hs.108957 6

structural constituent of ribosome

intracellular

nucleus

ribosome

DNA repair

translation

response to DNA damage stimulus

zinc ion binding

translation activator activity

caspase activator activity

G1 DNA damage checkpoint

DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis

positive regulation of anti-apoptosis

metal ion binding

 
204524_at -0.177 7.350 -2.216 4.232e-02 0.301 -4.021 PDPK1 3-phosphoinositide dependent protein kinase-1 16 2527970 NM_002613 16p13.3 Hs.459691 103

nucleotide binding

3-phosphoinositide-dependent protein kinase activity

protein binding

ATP binding

cytoplasm

cytosol

plasma membrane

plasma membrane

negative regulation of protein kinase activity

intracellular signaling cascade

transferase activity

peptidyl-threonine phosphorylation

actin cytoskeleton organization

activation of protein kinase B activity

cellular response to insulin stimulus

regulation of establishment of protein localization

PPAR signaling pathway

mTOR signaling pathway

Focal adhesion

Insulin signaling pathway

Endometrial cancer

Prostate cancer

Non-small cell lung cancer

231166_at -0.377 7.087 -2.216 4.233e-02 0.301 -4.021 GPR155 G protein-coupled receptor 155 2 -175004620 AI733474 2q31.1 Hs.516604 9

intracellular signaling cascade

membrane

integral to membrane

 
216484_x_at -0.179 8.173 -2.216 4.233e-02 0.301 -4.021 HDGF hepatoma-derived growth factor (high-mobility group protein 1-like) 1 -154978522, -154978522, -154978522 L24521 1q21-q23 Hs.506748 22

nucleotide binding

DNA binding

extracellular space

nucleus

cytoplasm

signal transduction

growth factor activity

heparin binding

cell proliferation

regulation of transcription

 
229871_at 0.210 6.649 2.216 4.234e-02 0.301 -4.021 SAMD4B sterile alpha motif domain containing 4B 19 44524947 W74622 19q13.2 Hs.612332 8

protein binding

 
202853_s_at -0.355 7.410 -2.216 4.235e-02 0.301 -4.021 RYK RYK receptor-like tyrosine kinase 3 -135358667 NM_002958 3q22 Hs.654562 13

nucleotide binding

transmembrane receptor protein tyrosine kinase activity

receptor activity

ATP binding

membrane fraction

plasma membrane

integral to plasma membrane

protein amino acid phosphorylation

signal transduction

axonogenesis

transferase activity

Wnt-protein binding

Wnt receptor activity

skeletal system morphogenesis

 
1557080_s_at 0.389 5.672 2.216 4.236e-02 0.301 -4.022 ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) 13 100902966 AI753143 13q33 Hs.696554 5

receptor activity

binding

extracellular region

cell adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

integrin complex

 
214298_x_at 0.237 4.890 2.216 4.236e-02 0.301 -4.022 SEPT6 septin 6 X -118634936, -118633715 AL568374 Xq24 Hs.496666 22

nucleotide binding

cytokinesis

protein binding

protein binding

GTP binding

cellular_component

cell cycle

septin complex

 
234873_x_at 0.186 11.469 2.216 4.236e-02 0.301 -4.022 RPL7A ribosomal protein L7a 9 135204889 AJ224080 9q34 Hs.499839 31

RNA binding

structural constituent of ribosome

membrane fraction

cytosol

translational elongation

cytosolic large ribosomal subunit

ribosome biogenesis

polysomal ribosome

Ribosome

239417_x_at 0.215 5.264 2.216 4.238e-02 0.301 -4.022 C6orf52 chromosome 6 open reading frame 52 6 -10779638, -10779638 AW103116 6p24.1 Hs.61389 1    
1554660_a_at -0.387 3.918 -2.215 4.238e-02 0.301 -4.022 C1orf71 chromosome 1 open reading frame 71 1 244796261, 244796261 BC036200 1q44 Hs.368353 9

membrane

integral to membrane

protein complex

 
1560078_at -0.208 4.273 -2.215 4.239e-02 0.301 -4.022 LAMA3 laminin, alpha 3 18 19523559, 19706981 AL708055 18q11.2 Hs.436367 49

receptor binding

structural molecule activity

extracellular region

basement membrane

laminin-1 complex

epidermis development

regulation of cell adhesion

regulation of cell migration

regulation of embryonic development

Focal adhesion

ECM-receptor interaction

Pathways in cancer

Small cell lung cancer

212119_at -0.213 10.984 -2.215 4.239e-02 0.301 -4.022 RHOQ ras homolog gene family, member Q 2 46623370 BF670447 2p21 Hs.709193 27

nucleotide binding

GTPase activity

profilin binding

GTP binding

intracellular

cytoplasm

actin filament

plasma membrane

GTP catabolic process

small GTPase mediated signal transduction

insulin receptor signaling pathway

regulation of cell shape

positive regulation of specific transcription from RNA polymerase II promoter

cortical actin cytoskeleton organization

GBD domain binding

regulation of actin cytoskeleton organization

membrane raft

positive regulation of glucose import

positive regulation of filopodium assembly

regulation of establishment of protein localization

Insulin signaling pathway

211062_s_at 0.155 6.147 2.215 4.239e-02 0.301 -4.022 CPZ carboxypeptidase Z 4 8645334 BC006393 4p16.1 Hs.78068 8

metallocarboxypeptidase activity

extracellular region

proteinaceous extracellular matrix

proteolysis

peptidase activity

metallopeptidase activity

zinc ion binding

Wnt receptor signaling pathway

metal ion binding

 
203882_at 0.344 7.118 2.215 4.240e-02 0.301 -4.023 IRF9 interferon regulatory factor 9 14 23700261 NM_006084 14q11.2 Hs.1706 33

transcription factor activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

cell surface receptor linked signal transduction

response to virus

identical protein binding

type I interferon biosynthetic process

Jak-STAT signaling pathway

228314_at 0.390 6.106 2.215 4.240e-02 0.301 -4.023 LRRC8C leucine rich repeat containing 8 family, member C 1 89871231 BE877357 1p22.2 Hs.412836 6

protein binding

membrane

integral to membrane

 
216331_at -0.210 9.969 -2.215 4.240e-02 0.301 -4.023 ITGA7 integrin, alpha 7 12 -54364622, -54364622 AK022548 12q13 Hs.524484 36

receptor activity

calcium ion binding

protein binding

cell adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

muscle organ development

integrin complex

regulation of cell shape

membrane

integral to membrane

blood vessel morphogenesis

Focal adhesion

ECM-receptor interaction

Regulation of actin cytoskeleton

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

213733_at 0.208 4.788 2.215 4.240e-02 0.301 -4.023 MYO1F myosin IF 19 -8491996 BF740152 19p13.3-p13.2 Hs.465818 11

nucleotide binding

motor activity

actin binding

calmodulin binding

ATP binding

negative regulation of cell adhesion

biological_process

unconventional myosin complex

positive regulation of cell migration

cortical actin cytoskeleton

filamentous actin

regulation of actin cytoskeleton organization

neutrophil degranulation

regulation of innate immune response

defense response to Gram-positive bacterium

 
1553893_at 0.235 5.005 2.215 4.241e-02 0.301 -4.023 CCDC105 coiled-coil domain containing 105 19 14982538 NM_173482 19p13.12 Hs.375985 2    
231389_at -0.267 4.319 -2.215 4.241e-02 0.301 -4.023 CXorf41 chromosome X open reading frame 41 X 106336517 AL136112 Xq22.3 Hs.128836 4    
226698_at 0.164 5.393 2.215 4.242e-02 0.301 -4.023 FCHSD1 FCH and double SH3 domains 1 5 -140999052 BE646638 5q31.3 Hs.591257 8    
214672_at 0.308 5.713 2.215 4.245e-02 0.301 -4.024 TTLL5 tubulin tyrosine ligase-like family, member 5 14 75197373 AB023215 14q24.3 Hs.709609 7

tubulin-tyrosine ligase activity

nucleus

cytoplasm

cilium

microtubule basal body

transcription

protein modification process

ligase activity

 
219305_x_at 0.220 5.808 2.215 4.246e-02 0.301 -4.024 FBXO2 F-box protein 2 1 -11631034 NM_012168 1p36.22 Hs.132753 Hs.556006 9

glycoprotein binding

ubiquitin-protein ligase activity

protein modification process

proteolysis

ubiquitin-dependent protein catabolic process

glycoprotein catabolic process

carbohydrate binding

ER-associated protein catabolic process

regulation of protein ubiquitination

dendritic spine

Ubiquitin mediated proteolysis

1565681_s_at -0.364 6.440 -2.214 4.247e-02 0.301 -4.024 DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 10 -310131 N42910 10p15.3 Hs.432397 7

catalytic activity

nucleus

transcription factor binding

metabolic process

 
203837_at 0.528 6.437 2.214 4.250e-02 0.301 -4.025 MAP3K5 mitogen-activated protein kinase kinase kinase 5 6 -136919879 NM_005923 6q22.33 Hs.186486 108

MAPKKK cascade

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

ATP binding

protein amino acid phosphorylation

apoptosis

activation of JUN kinase activity

induction of apoptosis by extracellular signals

caspase activator activity

transferase activity

protein homodimerization activity

interspecies interaction between organisms

MAPK signaling pathway

Neurotrophin signaling pathway

Amyotrophic lateral sclerosis (ALS)

244819_x_at 0.341 2.677 2.214 4.252e-02 0.301 -4.025 PSPH phosphoserine phosphatase 7 -56046237 AI936197 7p15.2-p15.1 Hs.512656 20

magnesium ion binding

phosphoserine phosphatase activity

protein binding

L-serine biosynthetic process

metabolic process

cellular amino acid biosynthetic process

hydrolase activity

Glycine, serine and threonine metabolism

Metabolic pathways

217803_at -0.439 7.676 -2.214 4.253e-02 0.301 -4.025 GOLPH3 golgi phosphoprotein 3 (coat-protein) 5 -32160580 NM_022130 5p13.3 Hs.408909 6

protein binding

cytoplasm

mitochondrion

Golgi apparatus

trans-Golgi network

membrane

positive regulation of TOR signaling pathway

 
203886_s_at 0.307 7.015 2.213 4.257e-02 0.302 -4.026 FBLN2 fibulin 2 3 13565624 NM_001998 3p25.1 Hs.198862 23

extracellular matrix structural constituent

calcium ion binding

extracellular region

proteinaceous extracellular matrix

 
206933_s_at 0.204 4.844 2.213 4.259e-02 0.302 -4.026 H6PD hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) 1 9217449 NM_004285 1p36 Hs.463511 25

glucose-6-phosphate dehydrogenase activity

binding

endoplasmic reticulum

endoplasmic reticulum lumen

microsome

carbohydrate metabolic process

glucose metabolic process

pentose-phosphate shunt

oxidoreductase activity

hydrolase activity

6-phosphogluconolactonase activity

glucose 1-dehydrogenase activity

oxidation reduction

Pentose phosphate pathway

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of plant hormones

Metabolic pathways

221952_x_at 0.265 9.485 2.212 4.263e-02 0.302 -4.027 TRMT5 TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae) 14 -60507919 AB037814 14q23.1 Hs.380159 5

cytoplasm

tRNA processing

methyltransferase activity

tRNA (guanine-N1-)-methyltransferase activity

transferase activity

 
201779_s_at -0.321 9.059 -2.212 4.264e-02 0.302 -4.027 RNF13 ring finger protein 13 3 151013164 AF070558 3q25.1 Hs.12333 Hs.712766 10

protein binding

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
220984_s_at 0.203 5.658 2.212 4.264e-02 0.302 -4.027 SLCO5A1 solute carrier organic anion transporter family, member 5A1 8 -70747123, -70747123, -70747123 NM_030958 8q13.3 Hs.152460 Hs.443609 3

transporter activity

transport

membrane

integral to membrane

 
220744_s_at 0.200 5.555 2.212 4.264e-02 0.302 -4.028 IFT122 intraflagellar transport 122 homolog (Chlamydomonas) 3 130641657, 130641657 NM_018262 3q21 Hs.655284 6

cytoplasm

 
211983_x_at 0.408 10.704 2.212 4.265e-02 0.302 -4.028 ACTG1 actin, gamma 1 17 -77091593 BE741683 17q25 Hs.514581 102

nucleotide binding

structural constituent of cytoskeleton

ATP binding

cytoplasm

cytoskeleton

cell motion

identical protein binding

response to calcium ion

Focal adhesion

Adherens junction

Tight junction

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

Vibrio cholerae infection

Pathogenic Escherichia coli infection - EHEC

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

241601_at -0.323 5.930 -2.212 4.266e-02 0.302 -4.028 WIPF3 WAS/WASL interacting protein family, member 3 7 29840865 H58488 7p14.3 Hs.709280 5

actin binding

cytoplasm

multicellular organismal development

spermatogenesis

cell differentiation

 
225489_at -0.387 7.352 -2.212 4.266e-02 0.302 -4.028 TMEM18 transmembrane protein 18 2 -657972 AI720705 2p25.3 Hs.43899 6

membrane

integral to membrane

 
239385_at 0.169 2.711 2.212 4.267e-02 0.302 -4.028 TFG TRK-fused gene 3 101910849 AI150613 3q12.2 Hs.518123 25

signal transducer activity

cytoplasm

identical protein binding

positive regulation of I-kappaB kinase/NF-kappaB cascade

Pathways in cancer

Thyroid cancer

222831_at 0.404 5.773 2.212 4.269e-02 0.302 -4.029 SAP30L SAP30-like 5 153805709 NM_024632 5q33.2 Hs.592566 8

nucleus

nucleolus

regulation of transcription

 
216916_s_at 0.204 4.943 2.212 4.270e-02 0.302 -4.029 DLGAP2 discs, large (Drosophila) homolog-associated protein 2 8 1436975 AF009204 8p23 Hs.113287 15

protein binding

neurofilament

plasma membrane

cell-cell signaling

nerve-nerve synaptic transmission

postsynaptic density

cell junction

synapse

postsynaptic membrane

 
204900_x_at -0.310 6.001 -2.211 4.272e-02 0.302 -4.029 SAP30 Sin3A-associated protein, 30kDa 4 174528667 NM_003864 4q34.1 Hs.591715 30

histone deacetylase complex

negative regulation of transcription from RNA polymerase II promoter

transcription corepressor activity

protein binding

nucleus

regulation of transcription

 
200787_s_at 0.344 5.202 2.211 4.273e-02 0.302 -4.029 PEA15 phosphoprotein enriched in astrocytes 15 1 158441748 BC002426 1q21.1 Hs.517216 37

protein binding

cytoplasm

microtubule associated complex

anti-apoptosis

carbohydrate transport

regulation of apoptosis

negative regulation of glucose import

 
205738_s_at 0.687 11.432 2.211 4.273e-02 0.302 -4.029 FABP3 fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor) 1 -31610686 NM_004102 1p33-p32 Hs.657242 35

transporter activity

cytoplasm

phosphatidylcholine biosynthetic process

transport

negative regulation of cell proliferation

lipid binding

PPAR signaling pathway

200000_s_at -0.230 8.398 -2.211 4.273e-02 0.302 -4.029 PRPF8 PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae) 17 -1500672 NM_006445 17p13.3 Hs.181368 42

nuclear mRNA splicing, via spliceosome

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

spliceosomal complex

U5 snRNP

visual perception

RNA splicing

nuclear speck

RNA splicing factor activity, transesterification mechanism

response to stimulus

 
232968_at 0.168 3.638 2.211 4.274e-02 0.302 -4.030 FANK1 fibronectin type III and ankyrin repeat domains 1 10 127575097 AU143929 10q26.2 Hs.352591 7

nucleus

cytoplasm

 
243832_at -0.182 2.818 -2.211 4.275e-02 0.302 -4.030 WDR33 WD repeat domain 33 2 -128238511, -128209431, -128178277 AV706184 2q14.3 Hs.620490 10

molecular_function

protein binding

nucleus

postreplication repair

spermatogenesis

 
205239_at -0.360 2.437 -2.211 4.275e-02 0.302 -4.030 AREG amphiregulin 4 75529716, 75699652 NM_001657 4q13-q21 Hs.270833 61

cytokine activity

extracellular space

epidermal growth factor receptor signaling pathway

G-protein coupled receptor protein signaling pathway

cell-cell signaling

growth factor activity

cell proliferation

cell surface

membrane

integral to membrane

positive regulation of DNA replication

ErbB signaling pathway

213666_at 0.259 4.713 2.211 4.278e-02 0.302 -4.030 SEPT6 septin 6 X -118634936, -118633715 AK026589 Xq24 Hs.496666 22

nucleotide binding

cytokinesis

protein binding

protein binding

GTP binding

cellular_component

cell cycle

septin complex

 
217911_s_at -0.226 10.389 -2.211 4.278e-02 0.302 -4.030 BAG3 BCL2-associated athanogene 3 10 121400871 NM_004281 10q25.2-q26.2 Hs.523309 37

protein binding

cellular_component

cytosol

protein folding

anti-apoptosis

 
204830_x_at 0.264 4.280 2.210 4.280e-02 0.302 -4.031 PSG5 pregnancy specific beta-1-glycoprotein 5 19 -48363734 NM_002781 19q13.2 Hs.654415 15

extracellular region

female pregnancy

 
228916_at -0.234 5.445 -2.210 4.280e-02 0.302 -4.031 CWF19L2 CWF19-like 2, cell cycle control (S. pombe) 11 -106702281 BE857467 11q22.3 Hs.212140 4    
1558028_x_at -0.633 5.884 -2.210 4.282e-02 0.302 -4.031 LOC647979 hypothetical LOC647979 20 -34096955 BI857154 20q11.23 Hs.649310 Hs.718413 2    
224436_s_at 0.519 7.121 2.210 4.283e-02 0.302 -4.032 NIPSNAP3A nipsnap homolog 3A (C. elegans) 9 106549789 BC005935 9q31.1 Hs.530275 6

cytoplasm

cytosol

 
1552684_a_at -0.288 5.289 -2.210 4.284e-02 0.302 -4.032 SENP8 SUMO/sentrin specific peptidase family member 8 15 70197807 NM_145204 15q23 Hs.513002 9

protein binding

proteolysis

peptidase activity

cysteine-type peptidase activity

modification-dependent protein catabolic process

 
209255_at -1.088 6.625 -2.210 4.284e-02 0.302 -4.032 KLHDC10 kelch domain containing 10 7 129497584 D87454 7q32.2 Hs.520710 3    
202746_at 0.336 8.510 2.210 4.284e-02 0.302 -4.032 ITM2A integral membrane protein 2A X -78502536 AL021786 Xq13.3-Xq21.2 Hs.17109 Hs.694944 14

cytoplasm

plasma membrane

integral to membrane

 
212365_at 0.328 6.043 2.210 4.285e-02 0.302 -4.032 MYO1B myosin IB 2 191818351, 191818498 BF215996 2q12-q34 Hs.439620 12

nucleotide binding

motor activity

actin binding

calmodulin binding

ATP binding

myosin complex

 
231595_at 0.200 5.832 2.210 4.287e-02 0.302 -4.032 LOC100129827 hypothetical protein LOC100129827 11   AI075905 11p15.4 Hs.246769 1    
216125_s_at -0.545 5.549 -2.209 4.288e-02 0.302 -4.032 RANBP9 RAN binding protein 9 6 -13729708 AF064606 6p23 Hs.708182 37

nucleus

cytoplasm

microtubule associated complex

protein complex assembly

microtubule nucleation

Ran GTPase binding

enzyme binding

 
1559517_a_at 0.194 3.243 2.209 4.289e-02 0.302 -4.033 SPIRE1 spire homolog 1 (Drosophila) 18 -12436510, -12436510 AL833817 18p11.21 Hs.515283 8

actin binding

protein binding

cytoplasm

cytoskeleton

transport

perinuclear region of cytoplasm

Dorso-ventral axis formation

221632_s_at -0.276 5.614 -2.209 4.289e-02 0.302 -4.033 WDR4 WD repeat domain 4 21 -43142404, -43136272 BC001074 21q22.3 Hs.248815 10

protein binding

nucleus

nucleoplasm

cytoplasm

tRNA modification

tRNA (guanine-N7-)-methyltransferase activity

 
214152_at -0.268 7.299 -2.209 4.290e-02 0.302 -4.033 CCPG1 cell cycle progression 1 15 -53434729, -53434729 AU144243 15q21.1 Hs.285051 5

cell cycle

membrane

integral to membrane

 
203073_at -0.428 6.727 -2.209 4.294e-02 0.303 -4.034 COG2 component of oligomeric golgi complex 2 1 228844824 NM_007357 1q42.2 Hs.211800 12

Golgi membrane

protein binding

Golgi apparatus

Golgi stack

protein amino acid glycosylation

intracellular protein transport

intra-Golgi vesicle-mediated transport

Golgi organization

protein transporter activity

oligosaccharide biosynthetic process

membrane

Golgi transport complex

Golgi transport complex

 
230531_at 0.274 5.158 2.209 4.294e-02 0.303 -4.034 KCNC3 potassium voltage-gated channel, Shaw-related subfamily, member 3 19 -55510576 AI796491 19q13.3-q13.4 Hs.467146 9

voltage-gated ion channel activity

voltage-gated potassium channel activity

protein binding

ion transport

potassium ion transport

voltage-gated potassium channel complex

cell death

membrane

integral to membrane

potassium ion binding

 
229999_at -0.374 5.951 -2.209 4.294e-02 0.303 -4.034 LOC100128416 RAB28, member RAS oncogene family pseudogene X   AI080106 Xq26.3 Hs.432355 Hs.709312 1    
206741_at 0.251 4.006 2.208 4.298e-02 0.303 -4.035 C3orf32 chromosome 3 open reading frame 32 3 -8636319 NM_015931 3p26.1 Hs.561182 4    
219687_at 0.204 2.742 2.208 4.299e-02 0.303 -4.035 HHAT hedgehog acyltransferase 1 208568228, 208568886 NM_018194 1q32 Hs.58650 8

nucleotide binding

GTP binding

endoplasmic reticulum

multicellular organismal development

acyltransferase activity

membrane

integral to membrane

transferase activity

 
211609_x_at -0.281 10.078 -2.208 4.299e-02 0.303 -4.035 PSMD4 proteasome (prosome, macropain) 26S subunit, non-ATPase, 4 1 149493820 U51007 1q21.3 Hs.505059 62

proteasome complex

protein binding

cytosol

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

212692_s_at 0.380 6.979 2.208 4.302e-02 0.303 -4.035 LRBA LPS-responsive vesicle trafficking, beach and anchor containing 4 -151405045 W60686 4q31.3 Hs.480938 9

protein binding

cellular_component

biological_process

 
203820_s_at -0.316 3.424 -2.208 4.303e-02 0.303 -4.035 IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 7 -23316352 NM_006547 7p11 Hs.700696 37

nucleotide binding

RNA binding

nucleus

cytoplasm

anatomical structure morphogenesis

negative regulation of translation

regulation of cytokine biosynthetic process

translation regulator activity

mRNA 5'-UTR binding

 
208370_s_at -0.434 7.490 -2.207 4.304e-02 0.303 -4.036 RCAN1 regulator of calcineurin 1 21 -34810653, -34810653, -34810653 NM_004414 21q22.1-q22.2 21q22.12 Hs.282326 45

transcription factor activity

protein binding

nucleus

cytoplasm

signal transduction

central nervous system development

blood circulation

response to mechanical stimulus

calcium-mediated signaling

response to estrogen stimulus

regulation of phosphoprotein phosphatase activity

skeletal muscle fiber development

negative regulation of smooth muscle cell differentiation

 
218045_x_at 0.220 5.503 2.207 4.306e-02 0.303 -4.036 PTMS parathymosin 12 6745801 NM_002824 12p13 Hs.504613 12

nucleus

DNA replication

immune response

 
244074_at 0.325 4.230 2.207 4.310e-02 0.303 -4.037 LOC100129104 similar to hydroxyproline-rich glycoprotein VSP-3 8   AL575511 8q24.22 Hs.598335 Hs.710138      
1560458_s_at -0.195 2.194 -2.207 4.311e-02 0.303 -4.037 CAPS2 calcyphosine 2 12 -73956025 BC033860 12q21.1-q21.2 Hs.407154 6

calcium ion binding

 
225003_at -0.250 8.568 -2.207 4.312e-02 0.303 -4.037 TMEM205 transmembrane protein 205 19 -11314451 BF343862 19p13.2 Hs.8036 2

membrane

integral to membrane

 
242210_at -0.245 4.497 -2.206 4.313e-02 0.303 -4.037 ZNF24 zinc finger protein 24 18 -31166175 AA749167 18q12 Hs.514802 15

transcription factor activity

protein binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

negative regulation of transcription

transcription repressor activity

metal ion binding

 
213821_s_at 0.292 5.211 2.206 4.313e-02 0.303 -4.038 IDS iduronate 2-sulfatase X -148376566, -148368202 AI819115 Xq28 Hs.460960 73

iduronate-2-sulfatase activity

calcium ion binding

lysosome

metabolic process

hydrolase activity

glycosaminoglycan metabolic process

Glycosaminoglycan degradation

Metabolic pathways

Lysosome

214992_s_at -0.349 5.483 -2.206 4.313e-02 0.303 -4.038 DNASE2 deoxyribonuclease II, lysosomal 19 -12847024 AD000092 19p13.2 Hs.118243 27

DNA binding

endodeoxyribonuclease activity

deoxyribonuclease II activity

protein binding

lysosome

DNA catabolic process

apoptosis

multicellular organismal development

hydrolase activity

erythrocyte differentiation

Lysosome

225252_at 0.309 6.959 2.206 4.315e-02 0.303 -4.038 SRXN1 sulfiredoxin 1 homolog (S. cerevisiae) 20 -575267 AL121758 20p13 Hs.355284 Hs.516830 18

nucleotide binding

magnesium ion binding

ATP binding

cytoplasm

cytosol

response to oxidative stress

antioxidant activity

sulfiredoxin activity

oxidation reduction

 
222130_s_at -0.275 6.905 -2.206 4.316e-02 0.303 -4.038 FTSJ2 FtsJ homolog 2 (E. coli) 7 -2240451 AK024635 7p22 Hs.279877 4

nucleic acid binding

nucleus

nucleolus

rRNA processing

RNA methyltransferase activity

transferase activity

rRNA methylation

methylation

 
1559481_at 0.161 3.369 2.206 4.318e-02 0.303 -4.039 CHIC1 cysteine-rich hydrophobic domain 1 X 72699708 AL832095 Xq13-q21 Hs.496323 5

plasma membrane

cytoplasmic vesicle

 
236271_at 0.221 5.109 2.206 4.318e-02 0.303 -4.039 LOC100131721 hypothetical protein LOC100131721 8   AA913233 8q21.13        
216481_at -0.247 7.324 -2.206 4.319e-02 0.303 -4.039 GRIP2 glutamate receptor interacting protein 2 3 -14510176 AF052177 3p24-p23 Hs.517819 12

protein binding

cytoplasm

membrane

 
209791_at 0.412 10.070 2.205 4.322e-02 0.303 -4.039 PADI2 peptidyl arginine deiminase, type II 1 -17265842 AL049569 1p36.13 Hs.33455 20

protein-arginine deiminase activity

calcium ion binding

cytoplasm

protein modification process

hydrolase activity

peptidyl-citrulline biosynthetic process from peptidyl-arginine

 
222336_at -0.267 3.118 -2.205 4.322e-02 0.303 -4.039 C4orf34 chromosome 4 open reading frame 34 4 -39228940 AW974915 4p14 Hs.576320 4

protein binding

membrane

integral to membrane

 
205628_at -0.202 3.465 -2.205 4.323e-02 0.304 -4.040 PRIM2 primase, DNA, polypeptide 2 (58kDa) 6 57290380 NM_000947 6p12-p11.1 Hs.654580 16

DNA binding

DNA primase activity

iron ion binding

nucleoplasm

alpha DNA polymerase:primase complex

DNA replication

DNA replication, synthesis of RNA primer

transcription

transferase activity

nucleotidyltransferase activity

metal ion binding

4 iron, 4 sulfur cluster binding

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

DNA replication

204391_x_at -0.300 6.725 -2.205 4.324e-02 0.304 -4.040 TRIM24 tripartite motif-containing 24 7 137795618 NM_015905 7q32-q34 Hs.490287 25

DNA binding

transcription coactivator activity

receptor binding

intracellular

nucleus

transcription from RNA polymerase II promoter

zinc ion binding

regulation of transcription

metal ion binding

 
225610_at -0.338 7.414 -2.205 4.325e-02 0.304 -4.040 UHRF2 ubiquitin-like with PHD and ring finger domains 2 9 6403150 BF511410 9p24.1 Hs.493401 10

DNA binding

ubiquitin-protein ligase activity

protein binding

nucleus

ubiquitin-dependent protein catabolic process

zinc ion binding

cell proliferation

ligase activity

cell differentiation

metal ion binding

regulation of cell cycle

protein autoubiquitination

 
205022_s_at -0.344 8.479 -2.205 4.325e-02 0.304 -4.040 FOXN3 forkhead box N3 14 -88692268, -88692268 NM_005197 14q31.3 Hs.434286 Hs.621371 16

DNA damage checkpoint

G2 phase of mitotic cell cycle

transcription factor activity

nucleus

cell cycle

protein C-terminus binding

transcription repressor activity

sequence-specific DNA binding

negative regulation of transcription, DNA-dependent

 
212403_at -0.290 7.503 -2.205 4.328e-02 0.304 -4.041 UBE3B ubiquitin protein ligase E3B 12 108399821 AI749193 12q24.11 Hs.374067 8

intracellular

protein modification process

ligase activity

acid-amino acid ligase activity

modification-dependent protein catabolic process

Ubiquitin mediated proteolysis

218002_s_at 0.658 8.200 2.204 4.329e-02 0.304 -4.041 CXCL14 chemokine (C-X-C motif) ligand 14 5 -134934267 NM_004887 5q31 Hs.483444 32

extracellular region

extracellular space

Golgi apparatus

chemotaxis

immune response

signal transduction

cell-cell signaling

chemokine activity

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

213634_s_at 0.199 6.114 2.204 4.330e-02 0.304 -4.041 TRMU tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase 22 45109961 AL031588 22q13 Hs.439524 13

tRNA binding

nucleotide binding

tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity

ATP binding

cytoplasm

mitochondrion

tRNA processing

transferase activity

 
218515_at -0.306 6.436 -2.204 4.332e-02 0.304 -4.041 C21orf66 chromosome 21 open reading frame 66 21 -33035520, -33028083, -33028080 NM_016631 21q21.3 Hs.644004 9

transcription factor activity

nucleus

cytosol

regulation of transcription, DNA-dependent

 
204277_s_at 0.233 5.173 2.204 4.333e-02 0.304 -4.042 TK2 thymidine kinase 2, mitochondrial 16 -65100845 BE895437 16q22-q23.1 Hs.512619 26

nucleotide binding

thymidine kinase activity

ATP binding

mitochondrion

mitochondrial inner membrane

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

DNA replication

kinase activity

transferase activity

phosphotransferase activity, alcohol group as acceptor

Pyrimidine metabolism

Drug metabolism - other enzymes

Metabolic pathways

213194_at -0.549 6.449 -2.204 4.334e-02 0.304 -4.042 ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 3 -78729077, -78729077 BF059159 3p12 Hs.13640 34

receptor activity

integral to plasma membrane

chemotaxis

cell adhesion

homophilic cell adhesion

multicellular organismal development

nervous system development

axon guidance receptor activity

cell surface

membrane

cell differentiation

identical protein binding

positive regulation of axonogenesis

Axon guidance

225409_at -0.263 7.072 -2.203 4.338e-02 0.304 -4.043 C2orf64 chromosome 2 open reading frame 64 2 -98582296 AA115117 2q11.2 Hs.596537 1    
228297_at 0.457 5.949 2.203 4.342e-02 0.304 -4.043 CNN3 calponin 3, acidic 1 -95135094 AI807004 1p22-p21 Hs.706617 13

actin binding

calmodulin binding

tropomyosin binding

cellular_component

smooth muscle contraction

troponin C binding

actomyosin structure organization

 
219452_at 0.182 4.806 2.203 4.342e-02 0.304 -4.043 DPEP2 dipeptidase 2 16 -66578795 NM_022355 16q22.1 Hs.372633 7

proteolysis

peptidase activity

metalloexopeptidase activity

dipeptidyl-peptidase activity

zinc ion binding

membrane

dipeptidase activity

anchored to membrane

metal ion binding

 
201236_s_at -0.705 8.144 -2.203 4.342e-02 0.304 -4.044 BTG2 BTG family, member 2 1 201541286 NM_006763 1q32 Hs.519162 45

protein binding

DNA repair

protein amino acid methylation

response to DNA damage stimulus

negative regulation of cell proliferation

anterior/posterior pattern formation

neuron differentiation

negative regulation of apoptosis

regulation of transcription

 
207511_s_at -0.255 5.553 -2.202 4.346e-02 0.304 -4.044 C2orf24 chromosome 2 open reading frame 24 2 -219744862 NM_015680 2q35 Hs.4973 5

membrane

integral to membrane

 
234440_at 0.163 3.339 2.202 4.346e-02 0.304 -4.044 TRD@ T cell receptor delta locus 14   X13954 14q11.2 Hs.540121 Hs.713514 Hs.74647 30    
242497_at 0.292 5.332 2.202 4.350e-02 0.305 -4.045 TRAFD1 TRAF-type zinc finger domain containing 1 12 111047731 AI694735 12q Hs.5148 10

protein binding

intracellular

zinc ion binding

metal ion binding

 
213310_at 0.425 5.823 2.202 4.352e-02 0.305 -4.046 EIF2C2 eukaryotic translation initiation factor 2C, 2 8 -141610445 AI613483 8q24 Hs.449415 47

RNA 7-methylguanosine cap binding

cytoplasmic mRNA processing body

translation initiation factor activity

endonuclease activity

protein binding

nucleus

cytoplasm

mRNA cap binding complex

regulation of translation

RNA-induced silencing complex

hydrolase activity

gene silencing by RNA

pre-microRNA processing

micro-ribonucleoprotein complex

siRNA binding

gene silencing by miRNA, negative regulation of translation

gene silencing by miRNA, negative regulation of translation

gene silencing by miRNA, mRNA cleavage

gene silencing by miRNA, mRNA cleavage

regulation of transcription

negative regulation of translational initiation

metal ion binding

endoribonuclease activity, cleaving siRNA-paired mRNA

 
204554_at -0.525 6.615 -2.201 4.354e-02 0.305 -4.046 PPP1R3D protein phosphatase 1, regulatory (inhibitor) subunit 3D 20 -57945281 AL109928 20q13.3 Hs.42215 7

protein serine/threonine phosphatase activity

protein binding

carbohydrate metabolic process

glycogen metabolic process

Insulin signaling pathway

205241_at 0.217 6.683 2.201 4.354e-02 0.305 -4.046 SCO2 SCO cytochrome oxidase deficient homolog 2 (yeast) 22 -49308862 NM_005138 22q13.33 Hs.718545 25

copper ion binding

mitochondrion

mitochondrial inner membrane

copper ion transport

cellular copper ion homeostasis

respiratory chain complex IV assembly

cell redox homeostasis

metal ion binding

oxidation reduction

 
1554470_s_at -0.477 6.802 -2.201 4.355e-02 0.305 -4.046 ZBTB44 zinc finger and BTB domain containing 44 11 -129601783 BC030580 11q24.3 Hs.719099 7

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
1566524_a_at 0.192 4.829 2.201 4.356e-02 0.305 -4.046 hCG_1986447 hCG1986447 2   AL832712 2p14 Hs.646781 2    
215817_at 0.211 3.545 2.201 4.358e-02 0.305 -4.047 SERPINB13 serpin peptidase inhibitor, clade B (ovalbumin), member 13 18 59405513 BE148534 18q21.3-q22 Hs.241407 12

serine-type endopeptidase inhibitor activity

cellular_component

cytoplasm

response to UV

regulation of proteolysis

peptidase inhibitor activity

 
233512_at 0.197 3.106 2.201 4.358e-02 0.305 -4.047 SH3RF3 SH3 domain containing ring finger 3 2 109112428 AF035291 2q13 Hs.171244 Hs.535157 2

protein binding

zinc ion binding

metal ion binding

 
202127_at -0.325 7.218 -2.201 4.359e-02 0.305 -4.047 PRPF4B PRP4 pre-mRNA processing factor 4 homolog B (yeast) 6 3966567 AB011108 6p25.2 Hs.159014 20

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

spliceosomal complex

chromosome

mRNA processing

protein amino acid phosphorylation

RNA splicing

transferase activity

 
218424_s_at -0.215 7.754 -2.201 4.360e-02 0.305 -4.047 STEAP3 STEAP family member 3 2 119697853 NM_018234 2q14.2 Hs.647822 11

binding

iron ion binding

copper ion binding

endosome

ion transport

iron ion transport

apoptosis

cell cycle

electron carrier activity

membrane

integral to membrane

oxidoreductase activity

metal ion binding

FAD binding

oxidation reduction

p53 signaling pathway

237691_x_at -0.372 6.795 -2.201 4.360e-02 0.305 -4.047 ENO3 enolase 3 (beta, muscle) 17 4795130 AW138371 17pter-p11 Hs.224171 11

phosphopyruvate hydratase complex

magnesium ion binding

phosphopyruvate hydratase activity

cytoplasm

glycolysis

lyase activity

Glycolysis / Gluconeogenesis

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

RNA degradation

209905_at 0.319 7.543 2.201 4.360e-02 0.305 -4.047 HOXA9 homeobox A9 7 -27168581 AI246769 7p15-p14 Hs.659350 63

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

transcription activator activity

sequence-specific DNA binding

 
202046_s_at 0.157 2.928 2.200 4.363e-02 0.305 -4.048 GRLF1 glucocorticoid receptor DNA binding factor 1 19 52113772 NM_004491 19q13.3 Hs.509447 26

DNA binding

transcription corepressor activity

GTPase activator activity

intracellular

nucleus

cytoplasm

signal transduction

negative regulation of transcription

Focal adhesion

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

208090_s_at -0.203 5.779 -2.200 4.363e-02 0.305 -4.048 AIRE autoimmune regulator 21 44530190, 44534701 NM_000658 21q22.3 Hs.129829 80

DNA binding

chromatin binding

nucleus

cytoplasm

regulation of transcription, DNA-dependent

humoral immune response

zinc ion binding

promoter binding

transcription activator activity

histone binding

translation regulator activity

metal ion binding

Ubiquitin mediated proteolysis

Primary immunodeficiency

228727_at -0.338 7.055 -2.200 4.366e-02 0.305 -4.048 ANXA11 annexin A11 10 -81904859 BF969970 10q23 Hs.530291 25

calcium ion binding

calcium-dependent phospholipid binding

nucleus

nuclear envelope

nucleoplasm

cytoplasm

immune response

melanosome

calcium-dependent protein binding

 
213309_at -0.556 8.500 -2.200 4.369e-02 0.305 -4.049 PLCL2 phospholipase C-like 2 3 16901455, 16949585 AL117515 3p24.3 Hs.202010 7

phosphoinositide phospholipase C activity

signal transducer activity

calcium ion binding

cytoplasm

lipid metabolic process

intracellular signaling cascade

 
202139_at 0.284 8.167 2.200 4.369e-02 0.305 -4.049 AKR7A2 aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase) 1 -19503048 NM_003689 1p36.13 Hs.571886 14

aldehyde reductase activity

mitochondrion

Golgi apparatus

carbohydrate metabolic process

cellular aldehyde metabolic process

electron carrier activity

oxidoreductase activity

oxidation reduction

 
214269_at 0.239 4.696 2.200 4.370e-02 0.305 -4.049 MFSD7 major facilitator superfamily domain containing 7 4 -665617 AK025922 4p16.3 Hs.567612 5

transport

membrane

integral to membrane

 
1569448_at -0.172 5.840 -2.200 4.370e-02 0.305 -4.049 PGM2L1 phosphoglucomutase 2-like 1 11 -73719008 BI768721 11q13.4 Hs.26612 6

carbohydrate metabolic process

glucose metabolic process

transferase activity

isomerase activity

intramolecular transferase activity, phosphotransferases

glucose-1,6-bisphosphate synthase activity

Starch and sucrose metabolism

213475_s_at 0.194 5.057 2.199 4.371e-02 0.305 -4.049 ITGAL integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide) 16 30391483 AC002310 16p11.2 Hs.174103 120

magnesium ion binding

T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell

receptor activity

calcium ion binding

plasma membrane

cell motion

inflammatory response

cell adhesion

heterophilic cell adhesion

leukocyte adhesion

signal transduction

integrin-mediated signaling pathway

integrin complex

integral to membrane

cell adhesion molecule binding

Cell adhesion molecules (CAMs)

Natural killer cell mediated cytotoxicity

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

227135_at -0.193 5.638 -2.199 4.373e-02 0.305 -4.050 NAAA N-acylethanolamine acid amidase 4 -77053832, -77050831 AI436803 4q21.1 Hs.437365 12

molecular_function

cellular_component

cytoplasm

lysosome

lipid metabolic process

biological_process

hydrolase activity

 
1559520_at 0.190 2.784 2.199 4.375e-02 0.305 -4.050 GYPA glycophorin A (MNS blood group) 4 -145249905 AL833104 4q28.2-q31.1 Hs.434973 60

membrane fraction

plasma membrane

integral to membrane

identical protein binding

Hematopoietic cell lineage

205640_at 0.265 5.368 2.199 4.376e-02 0.305 -4.050 ALDH3B1 aldehyde dehydrogenase 3 family, member B1 11 67532623, 67534365 NM_000694 11q13 Hs.523841 10

3-chloroallyl aldehyde dehydrogenase activity

aldehyde dehydrogenase [NAD(P)+] activity

alcohol metabolic process

cellular aldehyde metabolic process

lipid metabolic process

oxidoreductase activity

oxidation reduction

Glycolysis / Gluconeogenesis

Histidine metabolism

Tyrosine metabolism

Phenylalanine metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

Metabolic pathways

218357_s_at 0.249 10.938 2.199 4.378e-02 0.305 -4.051 TIMM8B translocase of inner mitochondrial membrane 8 homolog B (yeast) 11 -111461079 NM_012459 11q23.1-q23.2 Hs.279915 6

protein binding

mitochondrion

mitochondrial inner membrane presequence translocase complex

sensory perception of sound

zinc ion binding

protein transport

membrane

mitochondrial intermembrane space protein transporter complex

protein import into mitochondrial inner membrane

metal ion binding

intracellular protein transmembrane transport

 
233949_s_at 0.537 8.043 2.198 4.379e-02 0.305 -4.051 MYH7B myosin, heavy chain 7B, cardiac muscle, beta 20 33026866 AI160292 20q11.22 Hs.414122 8

nucleotide binding

motor activity

actin binding

ATP binding

striated muscle thick filament

striated muscle contraction

membrane

myosin complex

Tight junction

236651_at 0.167 3.018 2.198 4.379e-02 0.305 -4.051 KALRN kalirin, RhoGEF kinase 3 125296247, 125296247, 125296247, 125786195 AI125425 3q21.2 Hs.8004 24

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

ATP binding

intracellular

cytoplasm

protein amino acid phosphorylation

intracellular signaling cascade

nervous system development

actin cytoskeleton

vesicle-mediated transport

transferase activity

regulation of Rho protein signal transduction

 
211071_s_at 0.664 8.059 2.198 4.381e-02 0.305 -4.051 MLLT11 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11 1 149298774 BC006471 1q21 Hs.75823 9

molecular_function

cellular_component

 
202789_at 0.207 7.184 2.198 4.382e-02 0.305 -4.052 PLCG1 phospholipase C, gamma 1 20 39199574 AL022394 20q12-q13.1 Hs.268177 211

phosphoinositide phospholipase C activity

receptor signaling protein activity

calcium ion binding

protein binding

cellular_component

cytoplasm

cytosol

plasma membrane

intracellular signaling cascade

phospholipid catabolic process

lipid catabolic process

hydrolase activity

interspecies interaction between organisms

Inositol phosphate metabolism

Metabolic pathways

ErbB signaling pathway

Calcium signaling pathway

Phosphatidylinositol signaling system

VEGF signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Neurotrophin signaling pathway

Vibrio cholerae infection

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Glioma

Non-small cell lung cancer

201261_x_at 0.383 5.982 2.198 4.383e-02 0.305 -4.052 BGN biglycan X 152413604 BC002416 Xq28 Hs.821 63

extracellular matrix structural constituent

protein binding

extracellular region

proteinaceous extracellular matrix

biological_process

transport vesicle

 
234367_x_at 0.200 5.286 2.198 4.385e-02 0.306 -4.052 TMPRSS6 transmembrane protease, serine 6 22 -35791424 AL022314 22q12.3 Hs.370885 16

angiogenesis

serine-type endopeptidase activity

plasma membrane

proteolysis

intracellular signaling cascade

peptidase activity

integral to membrane

extracellular matrix organization

fibrinolysis

 
1555233_at 0.275 4.667 2.198 4.385e-02 0.306 -4.052 RHOJ ras homolog gene family, member J 14 62740897 BC025770 14q23.2 Hs.656339 8

nucleotide binding

GTPase activity

protein binding

GTP binding

cellular_component

intracellular

plasma membrane

small GTPase mediated signal transduction

Rho protein signal transduction

regulation of cell shape

actin cytoskeleton organization

 
1558653_at -0.186 3.764 -2.198 4.386e-02 0.306 -4.052 LOC339751 hypothetical protein LOC339751 2   BC040565 2q31.1 Hs.623925 1    
211651_s_at 0.552 5.727 2.197 4.391e-02 0.306 -4.053 LAMB1 laminin, beta 1 7 -107351481 M20206 7q22 Hs.650585 47

extracellular matrix structural constituent

extracellular region

basal lamina

laminin-1 complex

laminin-2 complex

laminin-2 complex

cell adhesion

embryo implantation

enzyme binding

positive regulation of cell migration

neuron projection development

substrate adhesion-dependent cell spreading

odontogenesis

laminin-8 complex

laminin-8 complex

laminin-10 complex

perinuclear region of cytoplasm

positive regulation of epithelial cell proliferation

Focal adhesion

ECM-receptor interaction

Pathways in cancer

Small cell lung cancer

210407_at -0.391 5.498 -2.197 4.394e-02 0.306 -4.054 PPM1A protein phosphatase 1A (formerly 2C), magnesium-dependent, alpha isoform 14 59782222, 59785718, 59785718 AF070670 14q23.1 Hs.130036 28

magnesium ion binding

protein serine/threonine phosphatase activity

signal transducer activity

cellular_component

membrane fraction

voltage-gated calcium channel complex

protein amino acid dephosphorylation

protein C-terminus binding

protein serine/threonine phosphatase complex

hydrolase activity

manganese ion binding

positive regulation of Wnt receptor signaling pathway

neuron projection

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of transcription, DNA-dependent

MAPK signaling pathway

201163_s_at 0.500 9.926 2.196 4.399e-02 0.306 -4.055 IGFBP7 insulin-like growth factor binding protein 7 4 -57592000 NM_001553 4q12 Hs.479808 Hs.711065 39

regulation of cell growth

insulin-like growth factor binding

extracellular region

cell adhesion

negative regulation of cell proliferation

 
239377_at -0.354 7.112 -2.196 4.400e-02 0.306 -4.055 EIF1AD eukaryotic translation initiation factor 1A domain containing 11 -65520592 T59859 11q13.1 Hs.425178 4

RNA binding

translation initiation factor activity

nucleus

translational initiation

 
200723_s_at -0.243 8.059 -2.196 4.403e-02 0.306 -4.056 CAPRIN1 cell cycle associated protein 1 11 34029805, 34029805 NM_005898 11p13 Hs.471818 10

protein binding

cytoplasm

cytosol

integral to plasma membrane

dendrite

cell projection

 
200626_s_at -0.331 8.092 -2.195 4.408e-02 0.307 -4.057 MATR3 matrin 3 5 138637690, 138657253 NM_018834 5q31.2 Hs.268939 24

nucleotide binding

RNA binding

structural molecule activity

protein binding

intracellular

nucleus

nuclear inner membrane

zinc ion binding

nuclear matrix

metal ion binding

 
209846_s_at 0.423 6.032 2.195 4.409e-02 0.307 -4.057 BTN3A2 butyrophilin, subfamily 3, member A2 6 26473376 BC002832 6p22.1 Hs.376046 9

biological_process

membrane

integral to membrane

 
209698_at 0.248 6.656 2.195 4.410e-02 0.307 -4.057 CCHCR1 coiled-coil alpha-helical rod protein 1 6 -31218194, -31218194, -2561482, -2561482, -2359996, -2359996 AF216493 6p21.3 Hs.485075 23

protein binding

nucleus

cytoplasm

protein export from nucleus

multicellular organismal development

cell differentiation

 
229533_x_at -0.409 6.203 -2.195 4.412e-02 0.307 -4.057 ZNF680 zinc finger protein 680 7 -63622468, -63617689 AI963028 7q11.21 Hs.520886 5

DNA binding

intracellular

nucleus

nucleolus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
225257_at -0.247 6.162 -2.195 4.412e-02 0.307 -4.058 CCDC97 coiled-coil domain containing 97 19 46507933 AA534536 19q13.2 Hs.437497 2    
231301_at -0.168 2.101 -2.194 4.414e-02 0.307 -4.058 NUP54 nucleoporin 54kDa 4 -77254840 BE671244 4q21.1 Hs.430435 16

nucleocytoplasmic transporter activity

protein binding

nucleus

nuclear pore

nucleoplasm

cytoplasm

protein targeting

nucleocytoplasmic transport

protein transport

membrane

mRNA transport

intracellular protein transmembrane transport

 
223171_at -0.303 6.625 -2.194 4.415e-02 0.307 -4.058 DYM dymeclin 18 -44824169 BC001252 18q12-q21.1 Hs.162996 12

cytoplasm

Golgi apparatus

 
218506_x_at -0.301 7.007 -2.194 4.415e-02 0.307 -4.058 GLYR1 glyoxylate reductase 1 homolog (Arabidopsis) 16 -4793204 NM_018459 16p13.3 Hs.387255 3

DNA binding

phosphogluconate dehydrogenase (decarboxylating) activity

binding

nucleus

pentose-phosphate shunt

metabolic process

oxidoreductase activity

coenzyme binding

 
1553553_at -0.363 3.668 -2.194 4.418e-02 0.307 -4.059 TAS2R39 taste receptor, type 2, member 39 7 142590633 NM_176881 7q34 Hs.553660 8

receptor activity

G-protein coupled receptor activity

signal transduction

G-protein coupled receptor protein signaling pathway

membrane

integral to membrane

response to stimulus

sensory perception of taste

Taste transduction

1569699_at 0.307 4.139 2.194 4.418e-02 0.307 -4.059 AK7 adenylate kinase 7 14 95928200 BC023986 14q32.2 Hs.667462 4

nucleotide binding

adenylate kinase activity

ATP binding

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

metabolic process

transferase activity

nucleobase, nucleoside, nucleotide kinase activity

Purine metabolism

Metabolic pathways

207998_s_at 0.215 4.853 2.194 4.419e-02 0.307 -4.059 CACNA1D calcium channel, voltage-dependent, L type, alpha 1D subunit 3 53504070 NM_000720 3p14.3 Hs.476358 25

voltage-gated ion channel activity

calcium ion binding

voltage-gated calcium channel complex

ion transport

calcium ion transport

dihydropyridine-sensitive calcium channel activity

membrane

integral to membrane

MAPK signaling pathway

Calcium signaling pathway

Cardiac muscle contraction

Vascular smooth muscle contraction

GnRH signaling pathway

Type II diabetes mellitus

Alzheimer's disease

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

225242_s_at 0.595 5.742 2.194 4.420e-02 0.307 -4.059 CCDC80 coiled-coil domain containing 80 3 -113806098 AW303375 3q13.2 Hs.477128 10

fibronectin binding

extracellular region

basement membrane

interstitial matrix

heparin binding

positive regulation of cell-substrate adhesion

extracellular matrix organization

intracellular membrane-bounded organelle

 
233294_at -0.677 6.452 -2.193 4.421e-02 0.307 -4.059 DENND2C DENN/MADD domain containing 2C 1 -114928718 AI214451 1p13.2 Hs.654928 5    
215472_at 0.252 4.130 2.193 4.422e-02 0.307 -4.059 PACRG PARK2 co-regulated 6 163068153, 163068991 AI017119 6q26 Hs.25791 20    
1552309_a_at -0.257 12.027 -2.193 4.425e-02 0.307 -4.060 NEXN nexilin (F actin binding protein) 1 78126787 NM_144573 1p31.1 Hs.612385 6

cytoplasm

cytoskeleton

cell-substrate adherens junction

cell junction

regulation of cell migration

actin filament binding

regulation of cytoskeleton organization

 
204632_at 0.178 6.596 2.193 4.427e-02 0.307 -4.061 RPS6KA4 ribosomal protein S6 kinase, 90kDa, polypeptide 4 11 63883200 NM_003942 11q11-q13 Hs.105584 16

nucleotide binding

magnesium ion binding

ribosomal protein S6 kinase activity

protein binding

ATP binding

ATP binding

nucleus

nucleus

regulation of transcription, DNA-dependent

protein amino acid phosphorylation

protein amino acid phosphorylation

protein kinase cascade

transferase activity

mitogen-activated protein kinase p38 binding

mitogen-activated protein kinase p38 binding

MAPK signaling pathway

Neurotrophin signaling pathway

231816_s_at 0.212 4.612 2.193 4.427e-02 0.307 -4.061 UBE2Q1 ubiquitin-conjugating enzyme E2Q family member 1 1 -152787674 AI986085 1q21.3 Hs.607928 7

nucleotide binding

ubiquitin-protein ligase activity

protein binding

ATP binding

ligase activity

modification-dependent protein catabolic process

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

202879_s_at 0.185 5.344 2.193 4.427e-02 0.307 -4.061 CYTH1 cytohesin 1 17 -74181724 AI798823 17q25 Hs.191215 28

ARF guanyl-nucleotide exchange factor activity

protein binding

intracellular

cytoplasm

plasma membrane

vesicle-mediated transport

regulation of cell adhesion

regulation of ARF protein signal transduction

 
218040_at -0.281 5.961 -2.193 4.428e-02 0.307 -4.061 PRPF38B PRP38 pre-mRNA processing factor 38 (yeast) domain containing B 1 109036454 NM_018061 1p13.3 Hs.342307 7

nucleus

spliceosomal complex

mRNA processing

RNA splicing

 
220086_at -0.279 5.762 -2.192 4.429e-02 0.307 -4.061 IKZF5 IKAROS family zinc finger 5 (Pegasus) 10 -124743186 NM_022466 10q26 Hs.501289 7

DNA binding

intracellular

nucleus

nucleolus

zinc ion binding

regulation of transcription

metal ion binding

 
239897_at -0.203 5.822 -2.192 4.431e-02 0.307 -4.061 BCLAF1 BCL2-associated transcription factor 1 6 -136619693 AW152620 6q22-q23 Hs.486542 16

DNA binding

protein binding

nucleus

cytoplasm

induction of apoptosis

negative regulation of transcription

transcription repressor activity

 
229837_s_at 0.241 5.155 2.192 4.431e-02 0.307 -4.061 PRO0461 hypothetical LOC652276 16 2593385 AA534630 16p13.3 Hs.459691 Hs.61960 4    
235783_at 0.342 5.944 2.192 4.432e-02 0.307 -4.061 MRTO4 mRNA turnover 4 homolog (S. cerevisiae) 1 19450661 BG107419 1p36.13 Hs.463797 7

intracellular

nucleus

nucleolus

ribosome biogenesis

 
224856_at -0.716 8.312 -2.192 4.432e-02 0.307 -4.062 FKBP5 FK506 binding protein 5 6 -35656311, -35649339, -35649339, -35649339 W86302 6p21.3-p21.2 Hs.407190 50

peptidyl-prolyl cis-trans isomerase activity

FK506 binding

nucleus

cytoplasm

protein folding

isomerase activity

heat shock protein binding

 
215873_x_at -0.183 5.709 -2.192 4.433e-02 0.307 -4.062 ABCC10 ATP-binding cassette, sub-family C (CFTR/MRP), member 10 6 43507466 AK024446 6p21.1 Hs.55879 12

nucleotide binding

ATP binding

plasma membrane

transport

integral to membrane

ATPase activity

ATPase activity, coupled to transmembrane movement of substances

ABC transporters

1554060_s_at 0.205 2.858 2.192 4.434e-02 0.307 -4.062 SETMAR SET domain and mariner transposase fusion gene 3 4319987, 4320296 BC011635 3p26.1 Hs.475300 17

DNA binding

transposase activity

cellular_component

nucleus

DNA repair

transposition, DNA-mediated

response to DNA damage stimulus

methyltransferase activity

zinc ion binding

chromatin modification

transferase activity

histone-lysine N-methyltransferase activity

Lysine degradation

1564164_at -0.355 3.321 -2.192 4.434e-02 0.307 -4.062 DENND1B DENN/MADD domain containing 1B 1 -195788007, -195746131 AL831839 1q31.3 Hs.657779 4    
1556277_a_at -0.460 5.363 -2.192 4.436e-02 0.307 -4.062 PAPD4 PAP associated domain containing 4 5 78943998 BG542611 5q14.1 Hs.418198 5

nucleotide binding

polynucleotide adenylyltransferase activity

ATP binding

nucleus

cytoplasm

mRNA processing

transferase activity

nuclear RNA-directed RNA polymerase complex

RNA polyadenylation

 
203193_at 0.210 7.521 2.191 4.441e-02 0.308 -4.063 ESRRA estrogen-related receptor alpha 11 63829619 NM_004451 11q13 Hs.110849 59

transcription factor activity

steroid hormone receptor activity

steroid binding

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

protein domain specific binding

sequence-specific DNA binding

positive regulation of transcription from RNA polymerase II promoter

metal ion binding

 
205158_at 0.378 5.675 2.191 4.442e-02 0.308 -4.063 RNASE4 ribonuclease, RNase A family, 4 14 20222211, 20226771 NM_002937 14q11.1 Hs.283749 10

nucleic acid binding

endonuclease activity

pancreatic ribonuclease activity

extracellular region

mRNA cleavage

hydrolase activity

 
218937_at 0.258 5.265 2.191 4.443e-02 0.308 -4.064 ZNF434 zinc finger protein 434 16 -3372085 NM_017810 16p13.3 Hs.592078 3

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
214285_at 0.667 9.920 2.191 4.443e-02 0.308 -4.064 FABP3 fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor) 1 -31610686 AI041520 1p33-p32 Hs.657242 35

transporter activity

cytoplasm

phosphatidylcholine biosynthetic process

transport

negative regulation of cell proliferation

lipid binding

PPAR signaling pathway

212281_s_at -0.424 6.535 -2.191 4.443e-02 0.308 -4.064 TMEM97 transmembrane protein 97 17 23670247 BF038366 17q11.2 Hs.199695 8

regulation of cell growth

molecular_function

cellular_component

membrane

integral to membrane

 
1556827_at 0.242 2.887 2.191 4.444e-02 0.308 -4.064 LOC339929 hypothetical protein LOC339929 3   BC042414 3q27.3 Hs.596639 1    
223635_s_at 0.240 5.460 2.191 4.444e-02 0.308 -4.064 SSBP3 single stranded DNA binding protein 3 1 -54464782, -54464782 BC003605 1p32.3 Hs.658676 10

DNA binding

single-stranded DNA binding

nucleus

transcription regulator activity

regulation of transcription

 
239996_x_at 0.225 6.126 2.191 4.446e-02 0.308 -4.064 ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 12 109203414, 109203414 AI671237 12q23-q24.1 Hs.506759 84

nucleotide binding

magnesium ion binding

regulation of the force of heart contraction

calcium-transporting ATPase activity

calcium ion binding

ATP binding

membrane fraction

microsome

integral to plasma membrane

ATP biosynthetic process

cation transport

cellular calcium ion homeostasis

ER-nuclear signaling pathway

cell adhesion

metabolic process

epidermis development

membrane

hydrolase activity

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

sarcoplasmic reticulum membrane

negative regulation of heart contraction

S100 alpha binding

sarcoplasmic reticulum calcium ion transport

Calcium signaling pathway

Cardiac muscle contraction

Alzheimer's disease

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

214960_at -0.270 5.476 -2.190 4.447e-02 0.308 -4.064 API5 apoptosis inhibitor 5 11 43290080 AF229253 11p11.2 Hs.435771 15

binding

nucleus

spliceosomal complex

cytoplasm

apoptosis

anti-apoptosis

anti-apoptosis

anti-apoptosis

fibroblast growth factor binding

 
207043_s_at -0.167 4.056 -2.190 4.451e-02 0.308 -4.065 SLC6A9 solute carrier family 6 (neurotransmitter transporter, glycine), member 9 1 -44234741, -44234741 NM_006934 1p33 Hs.442590 21

neurotransmitter:sodium symporter activity

membrane fraction

integral to plasma membrane

neurotransmitter transport

amino acid transport

symporter activity

glycine:sodium symporter activity

membrane

 
1562972_at -0.219 3.862 -2.190 4.452e-02 0.308 -4.065 LOC503519 hypothetical LOC503519 15   BC038777 15q11.2 Hs.371380 1    
204513_s_at 0.216 5.170 2.190 4.454e-02 0.308 -4.066 ELMO1 engulfment and cell motility 1 7 -36860485, -36860485, -36860485 NM_014800 7p14.2-p14.1 Hs.656638 29

protein binding

cytoplasm

cytosol

cytoskeleton

plasma membrane

phagocytosis, engulfment

apoptosis

cell motion

Rac protein signal transduction

SH3 domain binding

actin cytoskeleton organization

Chemokine signaling pathway

232897_at 0.345 5.847 2.189 4.455e-02 0.308 -4.066 FLJ20444 hypothetical protein FLJ20444 9   AK000451 9q21 Hs.536967      
221225_at 0.188 5.334 2.189 4.458e-02 0.308 -4.067 DCAKD dephospho-CoA kinase domain containing 17 -40456231, -40456231 NM_024819 17q21.31 Hs.463148 1

nucleotide binding

ATP binding

 
243564_at 0.212 3.733 2.189 4.458e-02 0.308 -4.067 PDE1C phosphodiesterase 1C, calmodulin-dependent 70kDa 7 -31795771 BE784669 7p14.3 Hs.655694 10

calmodulin-dependent cyclic-nucleotide phosphodiesterase activity

calmodulin binding

signal transduction

hydrolase activity

Purine metabolism

Calcium signaling pathway

Olfactory transduction

238020_at -0.323 6.911 -2.189 4.459e-02 0.308 -4.067 PSMC2 proteasome (prosome, macropain) 26S subunit, ATPase, 2 7 102775324 BG166796 7q22.1-q22.3 Hs.437366 56

nucleotide binding

proteasome complex

protein binding

ATP binding

nucleus

cytoplasm

cytosol

ubiquitin-dependent protein catabolic process

hydrolase activity

ATPase activity

protein catabolic process

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

interspecies interaction between organisms

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

221805_at 0.154 2.231 2.189 4.459e-02 0.308 -4.067 NEFL neurofilament, light polypeptide 8 -24864387 AL537457 8p21 Hs.521461 57

structural constituent of cytoskeleton

neurofilament

protein C-terminus binding

anterograde axon cargo transport

retrograde axon cargo transport

axon transport of mitochondrion

axon

TSC1-TSC2 complex

neurofilament bundle assembly

neurofilament bundle assembly

identical protein binding

intermediate filament organization

Amyotrophic lateral sclerosis (ALS)

205773_at -0.450 8.500 -2.189 4.460e-02 0.308 -4.067 CPEB3 cytoplasmic polyadenylation element binding protein 3 10 -93798378 NM_014912 10q23.32 Hs.131683 7

nucleotide binding

RNA binding

 
213376_at -0.297 6.831 -2.189 4.463e-02 0.308 -4.068 ZBTB1 zinc finger and BTB domain containing 1 14 64041044, 64041044 AI656706 14q23.3 Hs.655536 6

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
217069_at 0.320 4.692 2.188 4.463e-02 0.308 -4.068 MLL4 myeloid/lymphoid or mixed-lineage leukemia 4 19 40900760 AF105279 19q13.1 Hs.676457 Hs.92236 15

transcription factor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

methyltransferase activity

zinc ion binding

chromatin modification

transferase activity

histone methyltransferase complex

histone methyltransferase activity (H3-K4 specific)

metal ion binding

chromatin-mediated maintenance of transcription

 
202137_s_at -0.487 6.285 -2.188 4.464e-02 0.308 -4.068 ZMYND11 zinc finger, MYND domain containing 11 10 170423, 170423 NM_006624 10p14 Hs.292265 17

negative regulation of transcription from RNA polymerase II promoter

DNA binding

protein binding

nucleus

cell cycle

zinc ion binding

cell proliferation

regulation of transcription

metal ion binding

 
212581_x_at -0.166 13.775 -2.188 4.464e-02 0.308 -4.068 GAPDH glyceraldehyde-3-phosphate dehydrogenase 12 6513917 BE561479 12p13 Hs.544577 Hs.592355 Hs.598320 130

glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity

protein binding

cytoplasm

glucose metabolic process

glycolysis

membrane

oxidoreductase activity

perinuclear region of cytoplasm

NAD or NADH binding

oxidation reduction

Glycolysis / Gluconeogenesis

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

Alzheimer's disease

244123_at 0.187 4.965 2.188 4.467e-02 0.308 -4.068 LOC388553 similar to hCG1645909 19   BF476558 19q13.32        
219799_s_at 0.243 4.808 2.188 4.468e-02 0.308 -4.069 DHRS9 dehydrogenase/reductase (SDR family) member 9 2 169629544, 169631790, 169637330, 169645862 NM_005771 2q31.1 Hs.179608 11

alcohol dehydrogenase (NAD) activity

alcohol dehydrogenase (NAD) activity

retinol dehydrogenase activity

retinol dehydrogenase activity

binding

endoplasmic reticulum

endoplasmic reticulum membrane

microsome

microsome

androgen metabolic process

membrane

oxidoreductase activity

racemase and epimerase activity

integral to endoplasmic reticulum membrane

integral to endoplasmic reticulum membrane

epithelial cell differentiation

progesterone metabolic process

retinol metabolic process

9-cis-retinoic acid biosynthetic process

9-cis-retinoic acid biosynthetic process

3-alpha(17-beta)-hydroxysteroid dehydrogenase (NAD+) activity

3-alpha(17-beta)-hydroxysteroid dehydrogenase (NAD+) activity

oxidation reduction

Retinol metabolism

Metabolic pathways

220918_at 0.625 5.060 2.188 4.469e-02 0.308 -4.069 C21orf96 chromosome 21 open reading frame 96 21 -35332104 NM_025143 21q22.12 Hs.672131 4

cytosol

 
1554671_a_at 0.241 5.408 2.188 4.470e-02 0.309 -4.069 SRRM2 serine/arginine repetitive matrix 2 16 2742330 BC041155 16p13.3 Hs.433343 Hs.719123 20

RNA binding

protein binding

nucleus

spliceosomal complex

mRNA processing

RNA splicing

nuclear speck

 
1558212_at 0.381 5.993 2.187 4.473e-02 0.309 -4.070 FLJ35024 hypothetical LOC401491 9 -2525654 BC004474 9p24.2 Hs.416043 2    
208902_s_at 0.179 6.333 2.187 4.473e-02 0.309 -4.070 RPS28 ribosomal protein S28 19 8292383 BF431363 19p13.2 Hs.153177 Hs.719103 15

structural constituent of ribosome

protein binding

intracellular

cytosol

ribosome

rRNA processing

translational elongation

cytosolic small ribosomal subunit

ribosomal small subunit biogenesis

Ribosome

238697_at 0.243 3.047 2.187 4.474e-02 0.309 -4.070 NCRNA00086 non-protein coding RNA 86 X 134383533 AA565509 Xq26.3 Hs.374414 3    
228418_at -0.273 4.605 -2.187 4.475e-02 0.309 -4.070 EXOC5 exocyst complex component 5 14 -56738946 BF509391 14q22.3 Hs.715522 15

cytoplasm

exocytosis

post-Golgi vesicle-mediated transport

protein transport

vesicle docking

 
220942_x_at 0.256 10.841 2.187 4.475e-02 0.309 -4.070 FAM162A family with sequence similarity 162, member A 3 123585712 NM_014367 3q21.1 Hs.584881 8

membrane

integral to membrane

 
221163_s_at 0.341 6.659 2.187 4.477e-02 0.309 -4.070 MLXIPL MLX interacting protein-like 7 -72645459 NM_015977 7q11.23 Hs.647055 24

transcription factor activity

nucleus

transcription factor complex

cytoplasm

protein kinase cascade

transcription factor binding

anatomical structure morphogenesis

positive regulation of specific transcription from RNA polymerase II promoter

transcription activator activity

transcription repressor activity

glucose homeostasis

protein homodimerization activity

positive regulation of fatty acid biosynthetic process

positive regulation of glycolysis

negative regulation of transcription, DNA-dependent

positive regulation of transcription, DNA-dependent

protein heterodimerization activity

 
220415_at -0.374 3.764 -2.187 4.477e-02 0.309 -4.070 TNNI3K TNNI3 interacting kinase 1 74436534, 74473672 NM_015978 1p31.1 Hs.480085 8

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein tyrosine kinase activity

ATP binding

nucleus

nucleolus

cytoplasm

Golgi apparatus

plasma membrane

protein amino acid phosphorylation

protein C-terminus binding

transferase activity

troponin I binding

 
225768_at -0.811 7.005 -2.187 4.479e-02 0.309 -4.071 NR1D2 nuclear receptor subfamily 1, group D, member 2 3 23961754, 23962615 AI761621 3p24.2 Hs.37288 13

transcription factor activity

steroid hormone receptor activity

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

sequence-specific DNA binding

metal ion binding

 
242224_at -0.201 3.122 -2.187 4.480e-02 0.309 -4.071 GPATCH2 G patch domain containing 2 1 -215670456 R40111 1q41 Hs.420757 6

nucleic acid binding

intracellular

 
203482_at -0.290 6.631 -2.186 4.481e-02 0.309 -4.071 FAM178A family with sequence similarity 178, member A 10 102662315, 102662315, 102662315 AL133215 10q24.31 Hs.447458 5    
227598_at 0.203 3.757 2.186 4.485e-02 0.309 -4.072 C7orf29 chromosome 7 open reading frame 29 7 149657870 AI762857 7q36.1 Hs.655915 4    
203271_s_at 0.214 6.381 2.186 4.486e-02 0.309 -4.072 UNC119 unc-119 homolog (C. elegans) 17 -23897851 NM_005148 17q11.2 Hs.410455 16

soluble fraction

cytosol

synaptic transmission

visual perception

phototransduction

response to stimulus

 
215548_s_at -0.295 7.866 -2.186 4.487e-02 0.309 -4.072 SCFD1 sec1 family domain containing 1 14 30161271 AB020724 14q12 Hs.369168 17

cytoplasm

endoplasmic reticulum

Golgi apparatus

vesicle docking during exocytosis

protein transport

membrane

vesicle-mediated transport

 
207033_at 0.236 4.212 2.186 4.487e-02 0.309 -4.072 GIF gastric intrinsic factor (vitamin B synthesis) 11 -59353321 NM_005142 11q13 Hs.110014 13

extracellular region

ion transport

cobalt ion transport

cobalt ion transmembrane transporter activity

cobalamin transport

cobalamin binding

cobalt ion binding

 
223317_at 0.233 3.221 2.186 4.488e-02 0.309 -4.073 ALKBH7 alkB, alkylation repair homolog 7 (E. coli) 19 6323443 AA774555 19p13.3 Hs.111099 5    
229740_at 0.192 4.509 2.185 4.492e-02 0.309 -4.073 LOC643008 hypothetical protein LOC643008 17 71141108 BF478120 17q25.1 Hs.528605 3    
222702_x_at -0.342 7.266 -2.185 4.492e-02 0.309 -4.073 CRIPT cysteine-rich PDZ-binding protein 2 46697828 BF540954 2p21 Hs.133998 11

cytoplasm

cell junction

cell projection

dendritic spine

synapse

 
211220_s_at -0.694 4.581 -2.185 4.493e-02 0.309 -4.073 HSF2 heat shock transcription factor 2 6 122762394 BC005329 6q22.31 Hs.158195 28

transcription factor activity

transcription coactivator activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

response to stress

spermatogenesis

protein homodimerization activity

sequence-specific DNA binding

 
205039_s_at 0.222 6.700 2.185 4.495e-02 0.309 -4.074 IKZF1 IKAROS family zinc finger 1 (Ikaros) 7 50314923 NM_006060 7p13-p11.1 Hs.435949 Hs.488251 52

DNA binding

intracellular

nucleus

mesoderm development

zinc ion binding

regulation of transcription

metal ion binding

 
226512_at -0.258 6.615 -2.185 4.495e-02 0.309 -4.074 ZMYM2 zinc finger, MYM-type 2 13 19430809 AW340955 13q11-q12 Hs.644041 29

protein binding

cellular_component

nucleus

biological_process

zinc ion binding

PML body

ubiquitin conjugating enzyme binding

regulation of transcription

metal ion binding

 
203583_at -0.206 7.540 -2.185 4.496e-02 0.309 -4.074 UNC50 unc-50 homolog (C. elegans) 2 98591473 NM_014044 2q11.2 Hs.13370 7

RNA binding

nucleus

Golgi apparatus

protein transport

membrane

integral to membrane

 
227761_at 0.278 5.516 2.184 4.502e-02 0.310 -4.075 MYO5A myosin VA (heavy chain 12, myoxin) 15 -50386774 AW235548 15q21 Hs.21213 Hs.596221 47

microfilament motor activity

nucleotide binding

ruffle

calmodulin binding

ATP binding

cytoplasm

transport

myosin complex

actin filament-based movement

growth cone

neuron projection

actin filament binding

 
200954_at 0.204 8.103 2.184 4.503e-02 0.310 -4.075 ATP6V0C ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c 16 2503953 NM_001694 16p13.3 Hs.389107 23

protein binding

vacuole

ion transport

ATP synthesis coupled proton transport

proton transport

membrane

integral to membrane

proton-transporting V-type ATPase, V0 domain

interspecies interaction between organisms

proton-transporting ATP synthase complex, coupling factor F(o)

hydrogen ion transporting ATP synthase activity, rotational mechanism

proton-transporting ATPase activity, rotational mechanism

Oxidative phosphorylation

Metabolic pathways

Lysosome

Vibrio cholerae infection

Epithelial cell signaling in Helicobacter pylori infection

227382_at -0.245 4.134 -2.184 4.504e-02 0.310 -4.076 CYB5B cytochrome b5 type B (outer mitochondrial membrane) 16 68015998 AA649048 16q22.1 Hs.461131 7

mitochondrion

mitochondrial outer membrane

mitochondrial inner membrane

microsome

transport

enzyme activator activity

membrane

integral to membrane

heme binding

electron transport chain

metal ion binding

 
228112_at 0.208 4.836 2.183 4.507e-02 0.310 -4.076 DNAH1 dynein, axonemal, heavy chain 1 3 52325374 AI004779 3p21.1 Hs.655469 7

nucleotide binding

ciliary or flagellar motility

microtubule motor activity

ATP binding

axonemal dynein complex

microtubule

cilium

microtubule-based movement

ATPase activity

cilium axoneme

Huntington's disease

211169_s_at -0.750 5.281 -2.183 4.508e-02 0.310 -4.076 PPP1R3A protein phosphatase 1, regulatory (inhibitor) subunit 3A 7 -113304117 AF024579 7q31.1 Hs.458309 24

carbohydrate metabolic process

glycogen metabolic process

membrane

integral to membrane

Insulin signaling pathway

220676_at 0.172 4.227 2.183 4.511e-02 0.310 -4.077 ADAMTS8 ADAM metallopeptidase with thrombospondin type 1 motif, 8 11 -129780027 NM_007037 11q25 Hs.271605 9

metalloendopeptidase activity

integrin binding

extracellular region

proteinaceous extracellular matrix

proteolysis

heparin binding

peptidase activity

zinc ion binding

negative regulation of cell proliferation

low affinity phosphate transmembrane transporter activity

metal ion binding

 
227353_at 0.233 4.853 2.183 4.512e-02 0.310 -4.077 TMC8 transmembrane channel-like 8 17 73638453 BE671663 17q25.3 Hs.592102 12

endoplasmic reticulum

membrane

integral to membrane

 
220110_s_at 0.251 3.560 2.183 4.513e-02 0.310 -4.077 NXF3 nuclear RNA export factor 3 X -102217405 NM_022052 Xq22-q23 Hs.60386 7

nucleotide binding

mRNA binding

protein binding

intracellular

nucleus

cytoplasm

transport

poly(A)+ mRNA export from nucleus

nuclear RNA export factor complex

 
212831_at 0.250 4.718 2.183 4.513e-02 0.310 -4.077 MEGF9 multiple EGF-like-domains 9 9 -122402911 BF110421 9q32-q33.3 Hs.715550 4

receptor activity

calcium ion binding

cellular_component

biological_process

membrane

integral to membrane

 
234414_at 0.313 6.821 2.183 4.515e-02 0.310 -4.078 FAM22F family with sequence similarity 22, member F 9 -96120298 AL133071 9q22.32 Hs.648183 1    
1552708_a_at -0.236 3.087 -2.182 4.517e-02 0.310 -4.078 DUSP19 dual specificity phosphatase 19 2 183651531 AB038770 2q32.1 Hs.132237 7

inactivation of MAPK activity

protein tyrosine phosphatase activity

protein binding

cytoplasm

protein amino acid dephosphorylation

JNK cascade

protein tyrosine/threonine phosphatase activity

JUN kinase phosphatase activity

hydrolase activity

 
227001_at 0.362 4.408 2.182 4.518e-02 0.310 -4.078 NIPAL2 NIPA-like domain containing 2 8 -99273562 AI096706 8q22.2 Hs.309489 3

membrane

integral to membrane

 
205199_at 0.205 5.227 2.182 4.519e-02 0.310 -4.079 CA9 carbonic anhydrase IX 9 35663914 NM_001216 9p13-p12 Hs.63287 89

morphogenesis of an epithelium

carbonate dehydratase activity

nucleus

nucleolus

plasma membrane

one-carbon metabolic process

zinc ion binding

integral to membrane

lyase activity

cell projection

metal ion binding

secretion

Nitrogen metabolism

211968_s_at -0.356 9.335 -2.182 4.522e-02 0.310 -4.079 HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 14 -101616827, -101616827 AI962933 14q32.33 Hs.525600 Hs.700831 275

nucleotide binding

ATP binding

cytoplasm

cytosol

cytosol

mitochondrial transport

response to unfolded protein

signal transduction

nitric-oxide synthase regulator activity

TPR domain binding

TPR domain binding

cellular chaperone-mediated protein complex assembly

protein refolding

melanosome

protein homodimerization activity

positive regulation of nitric oxide biosynthetic process

unfolded protein binding

mitochondrial outer membrane translocase complex assembly

Antigen processing and presentation

Pathways in cancer

Prostate cancer

219163_at 0.270 6.061 2.182 4.523e-02 0.310 -4.079 ZNF562 zinc finger protein 562 19 -9620337 NM_017656 19p13.2 Hs.371107 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
217043_s_at -0.282 6.634 -2.181 4.526e-02 0.310 -4.080 MFN1 mitofusin 1 3 180548173 U95822 3q26.33 Hs.478383 16

nucleotide binding

GTPase activity

GTP binding

cytoplasm

mitochondrion

mitochondrial outer membrane

mitochondrial fusion

biological_process

membrane

integral to membrane

hydrolase activity

 
220329_s_at -0.323 6.261 -2.181 4.528e-02 0.310 -4.080 RMND1 required for meiotic nuclear division 1 homolog (S. cerevisiae) 6 -151767681 NM_017909 6q25.1 Hs.486835 5    
210611_s_at -0.422 6.975 -2.181 4.530e-02 0.310 -4.081 DTNA dystrobrevin, alpha 18 30327251, 30327251, 30327251, 30427279, 30544193, 30589937, 30589937, 30652299, 30652299 U26744 18q12 Hs.643454 38

calcium ion binding

protein binding

cytoplasm

striated muscle contraction

signal transduction

neuromuscular synaptic transmission

zinc ion binding

cell junction

synapse

 
1552301_a_at -0.337 10.094 -2.181 4.531e-02 0.310 -4.081 CORO6 coronin 6 17 -24965899 NM_032854 17q11.2 Hs.143046 7    
220477_s_at 0.212 8.864 2.180 4.533e-02 0.310 -4.081 C20orf30 chromosome 20 open reading frame 30 20 -5028483 NM_014145 20p13 Hs.719105 5

membrane

integral to membrane

 
212330_at -0.299 7.561 -2.180 4.533e-02 0.310 -4.081 TFDP1 transcription factor Dp-1 13 113287003, 113287056 R60866 13q34 Hs.79353 37

transcription factor activity

transcription coactivator activity

nucleus

nucleoplasm

transcription factor complex

regulation of transcription from RNA polymerase II promoter

cell cycle

transcription factor binding

cell proliferation

protein domain specific binding

Cell cycle

TGF-beta signaling pathway

228506_at -0.216 4.818 -2.180 4.534e-02 0.310 -4.081 NSMCE4A non-SMC element 4 homolog A (S. cerevisiae) 10 -123706592 AA009947 10q26.13 Hs.258798 8    
236886_at 0.198 4.413 2.180 4.534e-02 0.310 -4.081 LOC100049716 hypothetical protein LOC100049716 12   AI027546 12p13.33 Hs.655804 1    
230543_at 0.270 3.018 2.180 4.534e-02 0.310 -4.081 USP9X ubiquitin specific peptidase 9, X-linked X 40829831 AI761675 Xp11.4 Hs.77578 24

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

protein binding

cytoplasm

ubiquitin-dependent protein catabolic process

transforming growth factor beta receptor signaling pathway

female gamete generation

peptidase activity

protein deubiquitination

BMP signaling pathway

co-SMAD binding

 
217813_s_at 0.264 4.114 2.180 4.540e-02 0.311 -4.083 SPIN1 spindlin 1 9 90193116 NM_006717 9q22.1-q22.3 Hs.146804 16

nucleus

spindle

cell cycle

multicellular organismal development

gamete generation

 
229989_at 0.189 4.022 2.179 4.542e-02 0.311 -4.083 FDXACB1 ferredoxin-fold anticodon binding domain containing 1 11 -111249989 AA805700 11q23.1 Hs.697132 5

tRNA binding

nucleotide binding

magnesium ion binding

phenylalanine-tRNA ligase activity

ATP binding

cytoplasm

translation

phenylalanyl-tRNA aminoacylation

tRNA processing

 
225179_at -0.359 7.146 -2.179 4.543e-02 0.311 -4.083 UBE2K ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast) 4 39376058 AA161140 4p14 Hs.50308 Hs.714332 20

nucleotide binding

ubiquitin-protein ligase activity

protein binding

ATP binding

cytoplasm

ubiquitin-dependent protein catabolic process

ligase activity

ubiquitin protein ligase binding

post-translational protein modification

regulation of protein metabolic process

Ubiquitin mediated proteolysis

221430_s_at -0.391 6.086 -2.179 4.543e-02 0.311 -4.083 RNF146 ring finger protein 146 6 127629712 NM_030963 6q22.1-q22.33 Hs.267120 12

protein binding

zinc ion binding

metal ion binding

 
218751_s_at -0.349 7.217 -2.179 4.544e-02 0.311 -4.083 FBXW7 F-box and WD repeat domain containing 7 4 -153461859, -153461859, -153461859 NM_018315 4q31.3 Hs.679796 71

protein binding

nucleus

protein ubiquitination

modification-dependent protein catabolic process

Ubiquitin mediated proteolysis

219059_s_at 0.455 5.103 2.179 4.544e-02 0.311 -4.083 LYVE1 lymphatic vessel endothelial hyaluronan receptor 1 11 -10535988 AL574194 11p15 Hs.655332 Hs.708807 25

transmembrane receptor activity

binding

hyaluronic acid binding

membrane fraction

plasma membrane

integral to plasma membrane

glycosaminoglycan catabolic process

transport

cell motion

cell adhesion

cell-matrix adhesion

response to wounding

anatomical structure morphogenesis

 
209966_x_at 0.609 6.509 2.179 4.545e-02 0.311 -4.084 ESRRG estrogen-related receptor gamma 1 -214743218, -214743218, -214743210, -214743210 AF094518 1q41 Hs.444225 32

transcription factor activity

steroid hormone receptor activity

steroid binding

protein binding

nucleus

zinc ion binding

transcription activator activity

sequence-specific DNA binding

positive regulation of transcription, DNA-dependent

metal ion binding

AF-2 domain binding

 
202495_at -0.376 7.788 -2.179 4.546e-02 0.311 -4.084 TBCC tubulin folding cofactor C 6 -42820211 NM_003192 6pter-p12.1 Hs.75064 6

binding

cytoskeleton

microtubule

post-chaperonin tubulin folding pathway

chaperone binding

 
225168_at 0.234 5.050 2.179 4.547e-02 0.311 -4.084 FRMD4A FERM domain containing 4A 10 -13725711 T78406 10p13 Hs.330463 Hs.656573 3

binding

cytoplasm

cytoskeleton

 
206601_s_at 0.219 3.310 2.178 4.550e-02 0.311 -4.084 HOXD3 homeobox D3 2 176737050 BC005124 2q31.1 Hs.93574 25

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

anterior/posterior pattern formation

glossopharyngeal nerve morphogenesis

thyroid gland development

sequence-specific DNA binding

positive regulation of neuron differentiation

embryonic skeletal system morphogenesis

cartilage development

 
228091_at -0.191 5.660 -2.178 4.550e-02 0.311 -4.085 STX17 syntaxin 17 9 101708735 AI800609 9q31.1 Hs.709465 7

SNAP receptor activity

nucleolus

endoplasmic reticulum

intracellular protein transport

membrane

integral to membrane

vesicle-mediated transport

SNARE interactions in vesicular transport

211605_s_at 0.221 5.807 2.178 4.552e-02 0.311 -4.085 RARA retinoic acid receptor, alpha 17 35718971, 35728022, 35751867 U41742 17q21 Hs.654583 187

retinoic acid binding

transcription factor activity

steroid hormone receptor activity

retinoic acid receptor activity

transcription coactivator activity

protein binding

nucleus

regulation of transcription, DNA-dependent

signal transduction

zinc ion binding

cell surface

estrogen receptor signaling pathway

response to estradiol stimulus

response to retinoic acid

negative regulation of interferon-gamma production

negative regulation of tumor necrosis factor production

positive regulation of interleukin-13 production

positive regulation of interleukin-4 production

positive regulation of interleukin-5 production

sequence-specific DNA binding

positive regulation of T-helper 2 cell differentiation

regulation of anti-apoptosis

metal ion binding

retinoic acid receptor signaling pathway

perinuclear region of cytoplasm

Pathways in cancer

Acute myeloid leukemia

217827_s_at -0.474 8.679 -2.178 4.553e-02 0.311 -4.085 SPG21 spastic paraplegia 21 (autosomal recessive, Mast syndrome) 15 -63042415, -63042415 NM_016630 15q21-q22 Hs.242458 10

cytoplasm

endosome

Golgi apparatus

cytosol

cytosol

cell death

membrane

trans-Golgi network transport vesicle

trans-Golgi network transport vesicle

CD4 receptor binding

CD4 receptor binding

antigen receptor-mediated signaling pathway

 
232617_at 0.362 5.837 2.178 4.554e-02 0.311 -4.085 CTSS cathepsin S 1 -148969175 AK024855 1q21 Hs.181301 62

cysteine-type endopeptidase activity

extracellular region

lysosome

proteolysis

immune response

peptidase activity

membrane

intracellular membrane-bounded organelle

Lysosome

Antigen processing and presentation

1559603_at -0.266 4.149 -2.178 4.555e-02 0.311 -4.085 GPR12 G protein-coupled receptor 12 13 -26227340 BQ717575 13q12 Hs.123034 Hs.719715 7

lysosphingolipid and lysophosphatidic acid receptor activity

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

cellular calcium ion homeostasis

signal transduction

G-protein coupled receptor protein signaling pathway

 
223731_at 0.320 3.915 2.178 4.555e-02 0.311 -4.085 MYCBPAP MYCBP associated protein 17 45940743 AL136765 17q21.33 Hs.398196 Hs.716159 5

protein binding

cytoplasm

synaptic transmission

multicellular organismal development

spermatogenesis

membrane

cell differentiation

 
202499_s_at 0.394 3.900 2.178 4.556e-02 0.311 -4.086 SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 12 -7963091 NM_006931 12p13.3 Hs.419240 31

transporter activity

glucose transmembrane transporter activity

cytoplasm

plasma membrane

carbohydrate metabolic process

carbohydrate transport

glucose transport

integral to membrane

substrate-specific transmembrane transporter activity

transmembrane transport

 
212914_at -0.364 7.956 -2.178 4.557e-02 0.311 -4.086 CBX7 chromobox homolog 7 22 -37856724 AV648364 22q13.1 Hs.356416 8

chromatin

chromatin binding

nucleus

chromatin assembly or disassembly

chromatin modification

regulation of transcription

 
206338_at 0.277 5.919 2.177 4.559e-02 0.311 -4.086 ELAVL3 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C) 19 -11423142 NM_001420 19p13.2 Hs.1701 8

nucleotide binding

RNA binding

multicellular organismal development

nervous system development

cell differentiation

 
214267_s_at 0.256 4.851 2.177 4.561e-02 0.311 -4.087 CADM4 cell adhesion molecule 4 19 -48818361 AI050793 19q13.31 Hs.370984 3

protein binding

cell adhesion

membrane

integral to membrane

 
1565772_at 0.229 4.807 2.177 4.564e-02 0.311 -4.087 PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 11 -76710707 AL042444 11q13-q14 Hs.435714 190

MAPKKK cascade

nucleotide binding

protein serine/threonine kinase activity

collagen binding

ATP binding

cytoplasm

Golgi apparatus

plasma membrane

focal adhesion

apoptosis

ER-nuclear signaling pathway

cytoskeleton organization

transferase activity

cell junction

positive regulation of JUN kinase activity

protein amino acid autophosphorylation

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

Axon guidance

Focal adhesion

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

Fc gamma R-mediated phagocytosis

Regulation of actin cytoskeleton

Epithelial cell signaling in Helicobacter pylori infection

Renal cell carcinoma

207078_at -0.556 5.290 -2.177 4.564e-02 0.311 -4.087 MED6 mediator complex subunit 6 14 -70120709 NM_005466 14q24.2 Hs.497353 22

RNA polymerase II transcription factor activity

transcription coactivator activity

nucleus

RNA polymerase II transcription mediator activity

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

 
211987_at -0.353 8.786 -2.177 4.565e-02 0.311 -4.087 TOP2B topoisomerase (DNA) II beta 180kDa 3 -25614478 NM_001068 3p24 Hs.475733 55

nucleotide binding

heterochromatin

neuron migration

chromatin binding

DNA topoisomerase (ATP-hydrolyzing) activity

protein kinase C binding

ATP binding

nucleus

nucleoplasm

chromosome

nucleolus

cytoplasm

cytosol

DNA topological change

axonogenesis

protein C-terminus binding

forebrain development

histone deacetylase binding

protein heterodimerization activity

 
204145_at -0.228 7.270 -2.177 4.565e-02 0.311 -4.087 FRG1 FSHD region gene 1 4 191098967 NM_004477 4q35 Hs.203772 11

nucleus

spliceosomal complex

nucleolus

rRNA processing

mRNA processing

RNA splicing

Cajal body

nuclear speck

 
206875_s_at -0.338 7.680 -2.177 4.565e-02 0.311 -4.087 SLK STE20-like kinase (yeast) 10 105717459 NM_014720 10q24.33 Hs.591922 16

nucleotide binding

DNA binding

nuclease activity

protein serine/threonine kinase activity

ATP binding

cytoplasm

plasma membrane

nucleotide-excision repair

protein amino acid phosphorylation

apoptosis

transferase activity

 
208701_at 0.251 4.195 2.177 4.566e-02 0.311 -4.088 APLP2 amyloid beta (A4) precursor-like protein 2 11 129444925 BC000373 11q23-q25 11q24 Hs.709184 43

DNA binding

serine-type endopeptidase inhibitor activity

nucleus

plasma membrane

G-protein coupled receptor protein signaling pathway

integral to membrane

peptidase inhibitor activity

identical protein binding

 
234732_s_at 0.175 2.423 2.176 4.568e-02 0.311 -4.088 EFCAB6 EF-hand calcium binding domain 6 22 -42255986 AL355841 22q13.1-q13.33 Hs.658996 10

calcium ion binding

nucleus

regulation of transcription

 
201204_s_at 0.335 6.224 2.176 4.568e-02 0.311 -4.088 RRBP1 ribosome binding protein 1 homolog 180kDa (dog) 20 -17542322 AA706065 20p12 Hs.472213 19

receptor activity

endoplasmic reticulum

ribosome

translation

signal transduction

protein transport

membrane

integral to membrane

integral to endoplasmic reticulum membrane

intracellular protein transmembrane transport

 
218868_at -0.211 5.920 -2.176 4.569e-02 0.311 -4.088 ACTR3B ARP3 actin-related protein 3 homolog B (yeast) 7 152087783 NM_020445 7q36.1 Hs.647117 8

nucleotide binding

actin binding

protein binding

ATP binding

cytoplasm

cytoskeleton

regulation of actin filament polymerization

cell projection

 
235367_at -0.467 8.917 -2.176 4.570e-02 0.311 -4.088 MYPN myopalladin 10 69539255 BF109970 10q21.3 Hs.55205 12

actin binding

nucleus

cytoplasm

sarcomere

 
216779_at 0.141 3.685 2.176 4.570e-02 0.311 -4.088 CYLC1 cylicin, basic protein of sperm head cytoskeleton 1 X 83002825 Z22780 Xq21.1 Hs.444230 6

structural molecule activity

cytoplasm

cytoskeleton

multicellular organismal development

spermatogenesis

cell differentiation

cytoskeletal calyx

acrosomal matrix

 
208654_s_at -0.512 7.348 -2.176 4.571e-02 0.311 -4.089 CD164 CD164 molecule, sialomucin 6 -109794411 BF669455 6q21 Hs.520313 Hs.644693 17

extracellular region

plasma membrane

integral to plasma membrane

immune response

cell adhesion

heterophilic cell adhesion

signal transduction

multicellular organismal development

negative regulation of cell proliferation

Lysosome

212737_at 0.262 7.042 2.176 4.571e-02 0.311 -4.089 GM2A GM2 ganglioside activator 5 150612805 AL513583 5q31.3-q33.1 Hs.483873 32

lipid transporter activity

cytoplasm

mitochondrion

lysosome

hydrogen:potassium-exchanging ATPase complex

lipid metabolic process

ganglioside catabolic process

lipid transport

learning or memory

oligosaccharide catabolic process

internal side of plasma membrane

phospholipase activator activity

glycolipid catabolic process

lipid storage

sphingolipid catabolic process

sphingolipid activator protein activity

beta-N-acetylgalactosaminidase activity

apical cortex

neurological system process

neuromuscular process controlling balance

positive regulation of hydrolase activity

Lysosome

204905_s_at 0.367 7.054 2.176 4.572e-02 0.311 -4.089 EEF1E1 eukaryotic translation elongation factor 1 epsilon 1 6 -8024634, -8018593 NM_004280 6p24.3-p25.1 Hs.602353 Hs.719206 10

protein binding

nucleus

cytoplasm

translation

negative regulation of cell proliferation

positive regulation of apoptosis

positive regulation of DNA damage response, signal transduction by p53 class mediator

 
226303_at -0.538 7.714 -2.176 4.572e-02 0.311 -4.089 PGM5 phosphoglucomutase 5 9 70161634 AA706788 9q13 Hs.307835 8

magnesium ion binding

stress fiber

phosphoglucomutase activity

structural molecule activity

protein binding

spot adherens junction

focal adhesion

carbohydrate metabolic process

glucose metabolic process

cell adhesion

biological_process

internal side of plasma membrane

intercalated disc

dystrophin-associated glycoprotein complex

cell junction

sarcolemma

costamere

 
201067_at -0.343 8.272 -2.176 4.574e-02 0.311 -4.089 PSMC2 proteasome (prosome, macropain) 26S subunit, ATPase, 2 7 102775324 BF215487 7q22.1-q22.3 Hs.437366 56

nucleotide binding

proteasome complex

protein binding

ATP binding

nucleus

cytoplasm

cytosol

ubiquitin-dependent protein catabolic process

hydrolase activity

ATPase activity

protein catabolic process

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

interspecies interaction between organisms

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

224059_s_at 0.226 5.489 2.176 4.575e-02 0.311 -4.089 NUMBL numb homolog (Drosophila)-like 19 -45863651 BC001794 19q13.13-q13.2 Hs.326953 15

protein binding

cytoplasm

nervous system development

neuroblast proliferation

axonogenesis

forebrain development

adherens junction organization

Notch signaling pathway

218713_at -0.327 5.778 -2.175 4.576e-02 0.311 -4.089 NARG2 NMDA receptor regulated 2 15 -58499099 NM_024611 15q22.2 Hs.200943 6

nucleus

 
205529_s_at 0.313 5.509 2.175 4.577e-02 0.311 -4.090 RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 8 -93040327, -93040327, -93040327, -93040327 NM_004349 8q22 Hs.368431 85

transcription factor activity

protein binding

nucleus

generation of precursor metabolites and energy

regulation of transcription, DNA-dependent

zinc ion binding

transcription repressor activity

protein homodimerization activity

fat cell differentiation

metal ion binding

regulation of DNA binding

Pathways in cancer

Acute myeloid leukemia

224844_at -0.321 9.039 -2.175 4.580e-02 0.312 -4.090 SLAIN2 SLAIN motif family, member 2 4 48038369 BE551691 4p11 Hs.479677 5    
200670_at 0.317 6.722 2.175 4.582e-02 0.312 -4.091 XBP1 X-box binding protein 1 22 -27520547 NM_005080 22q12 22q12.1 Hs.437638 80

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

immune response

sequence-specific DNA binding

protein dimerization activity

 
219730_at -0.372 4.784 -2.175 4.583e-02 0.312 -4.091 MED18 mediator complex subunit 18 1 28528099 NM_017638 1p35.3 Hs.479911 6

nucleus

regulation of transcription from RNA polymerase II promoter

RNA polymerase II transcription mediator activity

identical protein binding

regulation of transcription

 
217486_s_at -0.277 4.237 -2.174 4.585e-02 0.312 -4.091 ZDHHC17 zinc finger, DHHC-type containing 17 12 75681984 AF161412 12q21.2 Hs.4014 12

signal transducer activity

signal transducer activity

protein binding

cytoplasm

Golgi apparatus

zinc ion binding

membrane

integral to membrane

transferase activity

protein palmitoylation

protein-cysteine S-palmitoleyltransferase activity

cytoplasmic vesicle

lipoprotein transport

positive regulation of I-kappaB kinase/NF-kappaB cascade

positive regulation of I-kappaB kinase/NF-kappaB cascade

metal ion binding

 
225384_at -0.391 5.390 -2.174 4.587e-02 0.312 -4.092 DOCK7 dedicator of cytokinesis 7 1 -62692984 BF001267 1p31.3 Hs.406156 15

microtubule cytoskeleton organization

guanyl-nucleotide exchange factor activity

GTP binding

multicellular organismal development

nervous system development

axonogenesis

cell differentiation

axon

growth cone

neuron projection development

activation of Rac GTPase activity

positive regulation of peptidyl-serine phosphorylation

basal part of cell

establishment of neuroblast polarity

Rac GTPase binding

GTPase binding

 
202217_at 0.401 10.519 2.174 4.587e-02 0.312 -4.092 C21orf33 chromosome 21 open reading frame 33 21 44377921 NM_004649 21q22.3 Hs.413482 13

mitochondrion

 
1565685_at -0.146 2.573 -2.174 4.588e-02 0.312 -4.092 LOC400940 hypothetical LOC400940 2 6039560 AA774300 2p25.2 Hs.378814 2    
227692_at 0.597 5.767 2.174 4.589e-02 0.312 -4.092 GNAI1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 7 79602075 AU153866 7q21 Hs.134587 85

nucleotide binding

GTPase activity

signal transducer activity

protein binding

GTP binding

intracellular

heterotrimeric G-protein complex

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

guanyl nucleotide binding

Chemokine signaling pathway

Axon guidance

Tight junction

Gap junction

Leukocyte transendothelial migration

Long-term depression

Melanogenesis

203519_s_at -0.344 7.727 -2.173 4.595e-02 0.312 -4.093 UPF2 UPF2 regulator of nonsense transcripts homolog (yeast) 10 -12002027, -12002026 NM_015542 10p14-p13 Hs.370689 Hs.610110 31

nuclear-transcribed mRNA catabolic process, nonsense-mediated decay

RNA binding

nucleus

cytoplasm

mRNA export from nucleus

RNA metabolic process

identical protein binding

perinuclear region of cytoplasm

 
225404_at -0.342 8.519 -2.173 4.597e-02 0.312 -4.093 C1orf212 chromosome 1 open reading frame 212 1 -35091710 R75637 1p34.3 Hs.27160 Hs.595007 Hs.661594 2

membrane

integral to membrane

 
206957_at 0.222 3.046 2.173 4.597e-02 0.312 -4.094 AGXT alanine-glyoxylate aminotransferase 2 241456834 NM_016236 2q36-q37 Hs.144567 44

serine-pyruvate transaminase activity

protein binding

mitochondrion

mitochondrial matrix

peroxisome

protein targeting to peroxisome

metabolic process

alanine-glyoxylate transaminase activity

response to hormone stimulus

amino acid binding

transferase activity

glycine biosynthetic process, by transamination of glyoxylate

pyridoxal phosphate binding

protein homodimerization activity

pyruvate biosynthetic process

glyoxylate metabolic process

oxalic acid secretion

response to glucocorticoid stimulus

response to cAMP

Alanine, aspartate and glutamate metabolism

Glycine, serine and threonine metabolism

Metabolic pathways

227760_at 0.273 4.003 2.173 4.599e-02 0.312 -4.094 IGFBPL1 insulin-like growth factor binding protein-like 1 9 -38398990 AL522781 9p13.1 Hs.349705 3

regulation of cell growth

insulin-like growth factor binding

extracellular region

 
201326_at -0.355 8.556 -2.173 4.599e-02 0.312 -4.094 CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) 7 56086871 BE737030 7p11.2 Hs.82916 17

nucleotide binding

ATP binding

cytoplasm

chaperonin-containing T-complex

protein folding

unfolded protein binding

 
201811_x_at 0.575 8.105 2.173 4.600e-02 0.312 -4.094 SH3BP5 SH3-domain binding protein 5 (BTK-associated) 3 -15271360, -15271360 NM_004844 3p24.3 Hs.257761 Hs.719150 11

protein kinase inhibitor activity

protein binding

cytoplasm

mitochondrion

intracellular signaling cascade

SH3 domain binding

 
217764_s_at 0.433 6.020 2.173 4.601e-02 0.312 -4.094 RAB31 RAB31, member RAS oncogene family 18 9698227 AF183421 18p11.3 Hs.714730 Hs.99528 13

nucleotide binding

GTPase activity

GTP binding

plasma membrane

small GTPase mediated signal transduction

protein transport

Endocytosis

216096_s_at -0.259 3.252 -2.172 4.603e-02 0.312 -4.095 NRXN1 neurexin 1 2 -49999147, -49999147 AF064842 2p16.3 Hs.637685 36

receptor activity

calcium ion binding

protein binding

protein binding

integral to plasma membrane

cell adhesion

axon guidance

membrane

integral to membrane

Cell adhesion molecules (CAMs)

204229_at 0.175 6.364 2.172 4.604e-02 0.312 -4.095 SLC17A7 solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7 19 -54624467 H40895 19q13 Hs.375616 16

ion transport

sodium ion transport

phosphate transport

neurotransmitter transport

symporter activity

sodium:inorganic phosphate symporter activity

sodium-dependent phosphate transmembrane transporter activity

membrane

integral to membrane

synaptosome

cell junction

synaptic vesicle membrane

sodium ion binding

cytoplasmic vesicle

sequestering of neurotransmitter

excitatory synapse

 
238478_at 0.354 5.713 2.172 4.604e-02 0.312 -4.095 BNC2 basonuclin 2 9 -16399500 H97386 9p22.3-p22.2 Hs.656581 Hs.693437 10

intracellular

nucleus

cytoplasm

plasma membrane

zinc ion binding

regulation of transcription

metal ion binding

 
225775_at 0.231 6.658 2.172 4.604e-02 0.312 -4.095 TSPAN33 tetraspanin 33 7 128571947 AK000208 7q32.1 Hs.27267 6

membrane

integral to membrane

 
238039_at 0.239 4.326 2.172 4.604e-02 0.312 -4.095 LOC728769 hypothetical protein LOC728769 5   BG180437 5q14.1 Hs.586193      
232149_s_at -0.312 5.613 -2.172 4.605e-02 0.312 -4.095 NSMAF neutral sphingomyelinase (N-SMase) activation associated factor 8 -59658619, -59658619 BF056507 8q12-q13 Hs.372000 8

receptor signaling protein activity

soluble fraction

cytoplasm

ceramide metabolic process

signal transduction

 
224311_s_at -0.605 5.702 -2.172 4.605e-02 0.312 -4.095 CAB39 calcium binding protein 39 2 231285800, 231286506 AF151824 2q37.1 Hs.632536 14

protein binding

cytoplasm

mTOR signaling pathway

205257_s_at 0.200 5.170 2.172 4.605e-02 0.312 -4.095 AMPH amphiphysin 7 -38389829 NM_001635 7p14-p13 Hs.592182 38

protein binding

cytoplasm

synaptic transmission

learning

synaptic vesicle

actin cytoskeleton

membrane

cell junction

cytoplasmic vesicle

synapse

synaptic vesicle endocytosis

Fc gamma R-mediated phagocytosis

230359_at 0.176 5.518 2.172 4.607e-02 0.312 -4.096 KNDC1 kinase non-catalytic C-lobe domain (KIND) containing 1 10 134823960 N45097 10q26.3 Hs.530685 3

molecular_function

guanyl-nucleotide exchange factor activity

cellular_component

intracellular

biological_process

regulation of small GTPase mediated signal transduction

 
43544_at -0.373 6.221 -2.172 4.608e-02 0.312 -4.096 MED16 mediator complex subunit 16 19 -818961 AA314406 19p13.3 Hs.365207 13

transcription coactivator activity

receptor activity

nucleus

regulation of transcription from RNA polymerase II promoter

transcription initiation from RNA polymerase II promoter

thyroid hormone receptor coactivator activity

androgen receptor signaling pathway

vitamin D receptor binding

regulation of transcription

thyroid hormone receptor binding

 
219236_at 0.240 5.607 2.172 4.610e-02 0.312 -4.096 PAQR6 progestin and adipoQ receptor family member VI 1 -154479833, -154479830 NM_024897 1q22 Hs.235873 5

receptor activity

membrane

integral to membrane

 
209443_at 0.878 7.072 2.172 4.610e-02 0.312 -4.096 SERPINA5 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5 14 94117483 J02639 14q32.1 Hs.159628 62

protease binding

serine-type endopeptidase inhibitor activity

protein binding

extracellular region

extracellular region

spermatogenesis

fusion of sperm to egg plasma membrane

heparin binding

membrane

peptidase inhibitor activity

acrosin binding

protein complex

negative regulation of proteolysis

Complement and coagulation cascades

227514_at -0.376 5.953 -2.171 4.612e-02 0.312 -4.096 ITPRIPL2 inositol 1,4,5-triphosphate receptor interacting protein-like 2 16 19032754 AI766311 16p12.3 Hs.530899 Hs.648523 3

membrane

integral to membrane

 
215560_x_at -0.183 4.650 -2.171 4.613e-02 0.313 -4.097 MTRF1L mitochondrial translational release factor 1-like 6 -153350092 AU145135 6q25-q26 Hs.225836 Hs.304818 9

cytoplasm

mitochondrion

translational termination

translation release factor activity, codon specific

 
203531_at -0.288 10.438 -2.171 4.613e-02 0.313 -4.097 CUL5 cullin 5 11 107384617 BF435809 11q22-q23 Hs.440320 Hs.701122 38

G1/S transition of mitotic cell cycle

receptor activity

calcium channel activity

protein binding

cytosol

ubiquitin-dependent protein catabolic process

cell cycle arrest

negative regulation of cell proliferation

induction of apoptosis by intracellular signals

cullin-RING ubiquitin ligase complex

ubiquitin protein ligase binding

interspecies interaction between organisms

Ubiquitin mediated proteolysis

1559060_a_at -0.434 5.104 -2.171 4.616e-02 0.313 -4.097 FNIP1 folliculin interacting protein 1 5 -131005305 BF677986 5q23.3 Hs.591273 4

cytoplasm

 
210834_s_at -0.208 3.349 -2.171 4.618e-02 0.313 -4.097 PTGER3 prostaglandin E receptor 3 (subtype EP3) 1 -71244124, -71209051, -71190702, -71090623 D38299 1p31.2 Hs.445000 45

ligand-dependent nuclear receptor activity

G-protein coupled receptor activity

prostaglandin E receptor activity

nuclear envelope

plasma membrane

integral to plasma membrane

transcription, DNA-dependent

signal transduction

G-protein coupled receptor protein signaling pathway

cell death

Calcium signaling pathway

Neuroactive ligand-receptor interaction

229112_at 0.192 6.107 2.171 4.619e-02 0.313 -4.098 SIRT5 sirtuin (silent mating type information regulation 2 homolog) 5 (S. cerevisiae) 6 13682770, 13682853 AW300354 6p23 Hs.567431 Hs.594133 13

NAD+ ADP-ribosyltransferase activity

mitochondrion

chromatin silencing

protein amino acid ADP-ribosylation

protein amino acid deacetylation

zinc ion binding

hydrolase activity

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides

regulation of transcription

metal ion binding

NAD binding

 
218807_at 0.218 5.206 2.170 4.621e-02 0.313 -4.098 VAV3 vav 3 guanine nucleotide exchange factor 1 -107915304, -107915304 NM_006113 1p13.3 Hs.267659 21

SH3/SH2 adaptor activity

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

GTPase activator activity

protein binding

intracellular

small GTPase mediated signal transduction

zinc ion binding

diacylglycerol binding

regulation of Rho protein signal transduction

metal ion binding

Chemokine signaling pathway

Focal adhesion

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Leukocyte transendothelial migration

Regulation of actin cytoskeleton

241746_at 0.192 4.368 2.170 4.622e-02 0.313 -4.098 CUL7 cullin 7 6 -43113332 AW081304 6p21.1 Hs.520136 17

vasculogenesis

protein binding

anaphase-promoting complex

cytoplasm

proteolysis

ubiquitin-dependent protein catabolic process

regulation of mitotic metaphase/anaphase transition

cullin-RING ubiquitin ligase complex

ubiquitin protein ligase binding

Ubiquitin mediated proteolysis

226636_at 0.362 4.942 2.170 4.622e-02 0.313 -4.098 PLD1 phospholipase D1, phosphatidylcholine-specific 3 -172801311 AI378587 3q26 Hs.382865 84

phospholipase D activity

protein binding

cytoplasm

endosome

endoplasmic reticulum

Golgi apparatus

chemotaxis

cell communication

Ras protein signal transduction

metabolic process

membrane

lipid catabolic process

hydrolase activity

phosphoinositide binding

perinuclear region of cytoplasm

NAPE-specific phospholipase D activity

Glycerophospholipid metabolism

Ether lipid metabolism

Metabolic pathways

Endocytosis

Fc gamma R-mediated phagocytosis

GnRH signaling pathway

Pathways in cancer

Pancreatic cancer

230368_at 0.241 5.606 2.170 4.622e-02 0.313 -4.098 ERF Ets2 repressor factor 19 -47443556 T73730 19q13 Hs.655969 17

transcription factor activity

ligand-regulated transcription factor activity

transcription corepressor activity

nucleus

regulation of transcription from RNA polymerase II promoter

cell proliferation

sequence-specific DNA binding

 
211837_s_at 0.246 6.449 2.170 4.623e-02 0.313 -4.098 PTCRA pre T-cell antigen receptor alpha 6 42991704 AF165312 6p21.3 Hs.169002 12

receptor activity

membrane

integral to membrane

negative regulation of thymocyte apoptosis

Notch signaling pathway

233496_s_at -0.311 10.678 -2.170 4.623e-02 0.313 -4.098 CFL2 cofilin 2 (muscle) 14 -34249338, -34249338, -34249338 AV726166 14q12 Hs.180141 20

actin binding

protein binding

intracellular

nucleus

cytoplasm

cytoskeleton

nuclear matrix

Axon guidance

Fc gamma R-mediated phagocytosis

Regulation of actin cytoskeleton

208524_at 0.189 4.539 2.170 4.625e-02 0.313 -4.099 GPR15 G protein-coupled receptor 15 3 99733567 NM_005290 3q11.2-q13.1 Hs.563128 11

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

purinergic nucleotide receptor activity, G-protein coupled

 
203022_at 0.296 5.552 2.170 4.625e-02 0.313 -4.099 RNASEH2A ribonuclease H2, subunit A 19 12778427 NM_006397 19p13.2 Hs.532851 8

RNA binding

endonuclease activity

ribonuclease H activity

ribonuclease activity

nucleus

DNA replication

RNA catabolic process

hydrolase activity

metal ion binding

DNA replication

236927_at 0.248 3.969 2.170 4.626e-02 0.313 -4.099 SVEP1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 9 -112167349 BF436117 9q32 Hs.522334 Hs.606771 5

chromatin binding

calcium ion binding

protein binding

extracellular region

cytoplasm

cell adhesion

membrane

 
232033_at -0.219 5.810 -2.170 4.626e-02 0.313 -4.099 USP37 ubiquitin specific peptidase 37 2 -219023217 BE670098 2q35 Hs.166068 13

ubiquitin thiolesterase activity

nucleus

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
218630_at 0.152 5.884 2.170 4.628e-02 0.313 -4.099 MKS1 Meckel syndrome, type 1 17 -53637796 NM_017777 17q22 Hs.408843 13    
223636_at 0.370 4.534 2.170 4.628e-02 0.313 -4.099 ZMYND12 zinc finger, MYND-type containing 12 1 -42668589 AL136858 1p34.2 Hs.294009 5

binding

intracellular

zinc ion binding

metal ion binding

 
218502_s_at -0.235 5.960 -2.170 4.628e-02 0.313 -4.099 TRPS1 trichorhinophalangeal syndrome I 8 -116489899 NM_014112 8q24.12 Hs.657018 22

skeletal system development

transcription factor activity

protein binding

intracellular

nucleus

transcription from RNA polymerase II promoter

NLS-bearing substrate import into nucleus

zinc ion binding

transcription repressor activity

sequence-specific DNA binding

negative regulation of transcription, DNA-dependent

metal ion binding

 
208848_at -0.421 7.788 -2.169 4.629e-02 0.313 -4.100 ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide 4 -100211152 M30471 4q21-q25 Hs.78989 33

retinoid metabolic process

respiratory system process

alcohol dehydrogenase (NAD) activity

binding

fatty acid binding

cytoplasm

mitochondrion

ethanol oxidation

zinc ion binding

electron carrier activity

oxidoreductase activity

peptidyl-cysteine S-nitrosylation

formaldehyde dehydrogenase activity

response to lipopolysaccharide

protein homodimerization activity

positive regulation of blood pressure

formaldehyde catabolic process

metal ion binding

response to nitrosative stress

response to redox state

S-(hydroxymethyl)glutathione dehydrogenase activity

oxidation reduction

Glycolysis / Gluconeogenesis

Fatty acid metabolism

Tyrosine metabolism

1- and 2-Methylnaphthalene degradation

3-Chloroacrylic acid degradation

Methane metabolism

Retinol metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

Metabolic pathways

214617_at 0.232 6.133 2.169 4.631e-02 0.313 -4.100 PRF1 perforin 1 (pore forming protein) 10 -72027109 AI445650 10q22 Hs.2200 88

calcium ion binding

apoptosis

cellular defense response

circadian rhythm

pathogenesis

membrane

integral to membrane

cytoplasmic membrane-bounded vesicle

cytolysis

response to ethanol

Natural killer cell mediated cytotoxicity

Type I diabetes mellitus

Autoimmune thyroid disease

Allograft rejection

Graft-versus-host disease

219025_at 0.337 6.313 2.169 4.634e-02 0.313 -4.101 CD248 CD248 molecule, endosialin 11 -65838533 NM_020404 11q13 Hs.195727 17

binding

calcium ion binding

sugar binding

proteinaceous extracellular matrix

cytoplasm

biological_process

membrane

integral to membrane

 
201818_at 0.184 5.859 2.169 4.637e-02 0.313 -4.101 LPCAT1 lysophosphatidylcholine acyltransferase 1 5 -1514541 NM_024830 5p15.33 Hs.368853 9

calcium ion binding

endoplasmic reticulum

Golgi apparatus

metabolic process

acyltransferase activity

phospholipid biosynthetic process

membrane

integral to membrane

transferase activity

1-acylglycerophosphocholine O-acyltransferase activity

1-alkylglycerophosphocholine O-acetyltransferase activity

 
211631_x_at 0.186 4.003 2.169 4.637e-02 0.313 -4.101 B4GALT1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 9 -33100638 M22921 9p13 Hs.272011 41

Golgi trans cisterna

epithelial cell development

acute inflammatory response

beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity

N-acetyllactosamine synthase activity

lactose synthase activity

extracellular region

Golgi apparatus

plasma membrane

carbohydrate metabolic process

lactose biosynthetic process

galactose metabolic process

protein amino acid terminal N-glycosylation

cell adhesion

binding of sperm to zona pellucida

penetration of zona pellucida

cytoskeletal protein binding

negative regulation of cell proliferation

glycoprotein biosynthetic process

oligosaccharide biosynthetic process

oligosaccharide biosynthetic process

external side of plasma membrane

integral to membrane

basolateral plasma membrane

transferase activity, transferring glycosyl groups

desmosome

glycocalyx

manganese ion binding

extracellular matrix organization

mammary gland development

brush border membrane

development of secondary sexual characteristics

metal ion binding

branching morphogenesis of a tube

leukocyte migration

regulation of cell motion

regulation of acrosome reaction

positive regulation of epithelial cell proliferation involved in wound healing

angiogenesis involved in wound healing

positive regulation of apoptosis involved in mammary gland involution

Galactose metabolism

N-Glycan biosynthesis

Keratan sulfate biosynthesis

Glycosphingolipid biosynthesis - lacto and neolacto series

Metabolic pathways

203386_at -0.305 8.755 -2.168 4.638e-02 0.313 -4.101 TBC1D4 TBC1 domain family, member 4 13 -74756809 AI650848 13q22.2 Hs.210891 26

GTPase activator activity

Rab GTPase activator activity

intracellular

cytoplasm

regulation of Rab GTPase activity

 
208562_s_at -0.229 4.642 -2.168 4.638e-02 0.313 -4.101 ABCC9 ATP-binding cassette, sub-family C (CFTR/MRP), member 9 12 -21849374, -21841590 NM_020297 12p12.1 Hs.446050 35

nucleotide binding

receptor activity

transporter activity

ATP binding

transport

sulfonylurea receptor activity

ATP-sensitive potassium channel complex

potassium ion import

potassium channel regulator activity

membrane

integral to membrane

ATPase activity

ATPase activity, coupled to transmembrane movement of substances

defense response to virus

ABC transporters

206643_at -0.178 3.544 -2.168 4.639e-02 0.313 -4.102 HAL histidine ammonia-lyase 12 -94891272 NM_002108 12q22-q24.1 Hs.190783 9

histidine ammonia-lyase activity

histidine ammonia-lyase activity

soluble fraction

cytoplasm

cytosol

histidine catabolic process

biosynthetic process

ammonia ligase activity

lyase activity

Histidine metabolism

Nitrogen metabolism

Metabolic pathways

226169_at 0.321 6.244 2.168 4.640e-02 0.313 -4.102 SBF2 SET binding factor 2 11 -9756789 AW276572 11p15.4 Hs.577252 14

protein binding

cytoplasm

vacuolar membrane

membrane

dephosphorylation

phosphatase activity

phosphatase regulator activity

phosphatase binding

phosphoinositide binding

myelination

protein homodimerization activity

protein tetramerization

 
202908_at 0.197 6.655 2.168 4.640e-02 0.313 -4.102 WFS1 Wolfram syndrome 1 (wolframin) 4 6322477 NM_006005 4p16 Hs.518602 Hs.716556 86

kidney development

renal water homeostasis

endoplasmic reticulum

ER overload response

ER overload response

visual perception

sensory perception of sound

membrane

integral to membrane

protein maturation by protein folding

integral to endoplasmic reticulum membrane

dendrite

endoplasmic reticulum calcium ion homeostasis

glucose homeostasis

negative regulation of programmed cell death

negative regulation of neuron apoptosis

neurological system process

ATPase binding

positive regulation of protein metabolic process

positive regulation of calcium ion transport

calcium ion homeostasis

 
238316_at 0.259 3.748 2.168 4.640e-02 0.313 -4.102 ZNF567 zinc finger protein 567 19 41872141 BF061829 19q13.12 Hs.412517 4

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1552343_s_at -0.471 6.595 -2.168 4.643e-02 0.313 -4.102 PDE7A phosphodiesterase 7A 8 -66796607, -66792459 NM_002604 8q13 Hs.527119 16

cell fraction

3',5'-cyclic-AMP phosphodiesterase activity

signal transduction

hydrolase activity

Purine metabolism

224683_at 0.257 6.064 2.168 4.643e-02 0.313 -4.102 FBXO18 F-box protein, helicase, 18 10 5972219, 5976354 BE961916 10p15.1 Hs.498543 7

nucleotide binding

DNA binding

ATP-dependent DNA helicase activity

helicase activity

ATP binding

nucleus

DNA repair

hydrolase activity

modification-dependent protein catabolic process

 
1562490_at -0.173 2.449 -2.168 4.644e-02 0.313 -4.102 THEM5 thioesterase superfamily member 5 1 -150086200 AK095283 1q21.3 Hs.132648 2

hydrolase activity

 
209831_x_at -0.250 6.929 -2.168 4.644e-02 0.313 -4.102 DNASE2 deoxyribonuclease II, lysosomal 19 -12847024 AB004574 19p13.2 Hs.118243 27

DNA binding

endodeoxyribonuclease activity

deoxyribonuclease II activity

protein binding

lysosome

DNA catabolic process

apoptosis

multicellular organismal development

hydrolase activity

erythrocyte differentiation

Lysosome

214493_s_at -0.335 4.578 -2.168 4.645e-02 0.313 -4.103 INADL InaD-like (Drosophila) 1 61980736 NM_005799 1p31.3 Hs.478125 24

protein binding

cellular_component

plasma membrane

tight junction

intracellular signaling cascade

apical plasma membrane

cell junction

Tight junction

241140_at -0.207 5.341 -2.168 4.645e-02 0.313 -4.103 LMO7 LIM domain 7 13 75092570, 75232797 AA702962 13q22.2 Hs.207631 18

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein binding

nucleus

cytoplasm

zinc ion binding

protein ubiquitination

metal ion binding

Adherens junction

201646_at -0.402 7.181 -2.167 4.646e-02 0.313 -4.103 SCARB2 scavenger receptor class B, member 2 4 -77298917 AA885297 4q21.1 Hs.349656 Hs.714206 24

receptor activity

protein binding

membrane fraction

lysosome

integral to plasma membrane

cell adhesion

membrane

Lysosome

210680_s_at -0.194 5.150 -2.167 4.647e-02 0.313 -4.103 MASP1 mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) 3 -188447299, -188434565, -188418631 D17525 3q27-q28 Hs.89983 30

complement activation, lectin pathway

complement activation, lectin pathway

serine-type endopeptidase activity

calcium ion binding

extracellular region

extracellular region

extracellular space

proteolysis

peptidase activity

protein homodimerization activity

calcium-dependent protein binding

Complement and coagulation cascades

202116_at -0.208 7.182 -2.167 4.648e-02 0.313 -4.103 DPF2 D4, zinc and double PHD fingers family 2 11 64857921 NM_006268 11q13 Hs.13495 11

protein binding

intracellular

nucleus

cytoplasm

apoptosis

zinc ion binding

induction of apoptosis by extracellular signals

regulation of transcription

metal ion binding

 
225001_at 0.187 6.224 2.167 4.648e-02 0.313 -4.103 RAB3D RAB3D, member RAS oncogene family 19 -11296092 AI744658 19p13.2 Hs.655274 13

nucleotide binding

GTPase activity

protein binding

GTP binding

plasma membrane

exocytosis

small GTPase mediated signal transduction

protein transport

 
212634_at -0.427 6.841 -2.167 4.650e-02 0.313 -4.104 KIAA0776 KIAA0776 6 97076422 AW298092 6q16.1 Hs.149367 8

protein binding

 
219711_at -0.359 6.186 -2.167 4.650e-02 0.313 -4.104 ZNF586 zinc finger protein 586 19 62972836 NM_017652 19q13.43 Hs.709730 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
201830_s_at -0.439 6.960 -2.167 4.652e-02 0.313 -4.104 NET1 neuroepithelial cell transforming 1 10 5444517, 5478545 NM_005863 10p15 Hs.25155 19

regulation of cell growth

guanyl-nucleotide exchange factor activity

Rho guanyl-nucleotide exchange factor activity

cellular_component

intracellular

nucleus

cytoplasm

intracellular signaling cascade

regulation of Rho protein signal transduction

 
226058_at 0.232 5.513 2.166 4.656e-02 0.313 -4.105 B3GNT9 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 16 -65739505 AI651445 16q22.1 Hs.718517 2

Golgi apparatus

protein amino acid glycosylation

galactosyltransferase activity

membrane

integral to membrane

transferase activity, transferring glycosyl groups

 
202160_at -0.359 7.854 -2.166 4.656e-02 0.313 -4.105 CREBBP CREB binding protein 16 -3715056 NM_004380 16p13.3 Hs.459759 399

histone acetyltransferase complex

response to hypoxia

p53 binding

transcription factor activity

transcription coactivator activity

transcription coactivator activity

histone acetyltransferase activity

signal transducer activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

protein complex assembly

signal transduction

zinc ion binding

acetyltransferase activity

histone acetylation

transferase activity

N-terminal peptidyl-lysine acetylation

homeostatic process

interspecies interaction between organisms

positive regulation of transcription

positive regulation of transcription

metal ion binding

MyoD binding

Cell cycle

Wnt signaling pathway

Notch signaling pathway

TGF-beta signaling pathway

Adherens junction

Jak-STAT signaling pathway

Long-term potentiation

Melanogenesis

Huntington's disease

Pathways in cancer

Renal cell carcinoma

Prostate cancer

219999_at -0.260 6.195 -2.166 4.657e-02 0.313 -4.105 MAN2A2 mannosidase, alpha, class 2A, member 2 15 89248423 NM_018621 15q26.1 Hs.116459 20

Golgi membrane

alpha-mannosidase activity

mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity

Golgi apparatus

carbohydrate metabolic process

mannose metabolic process

metabolic process

zinc ion binding

membrane

integral to membrane

carbohydrate binding

metal ion binding

N-Glycan biosynthesis

Metabolic pathways

205184_at 0.224 4.079 2.166 4.657e-02 0.313 -4.105 GNG4 guanine nucleotide binding protein (G protein), gamma 4 1 -233777607, -233777607 NM_004485 1q42.3 Hs.159711 13

signal transducer activity

heterotrimeric G-protein complex

plasma membrane

signal transduction

regulation of G-protein coupled receptor protein signaling pathway

hormone-mediated signaling

negative regulation of cell growth

Chemokine signaling pathway

223440_at -0.229 6.191 -2.166 4.659e-02 0.314 -4.105 C16orf70 chromosome 16 open reading frame 70 16 65701415 BC004556 16q22.1 Hs.513666 7

protein binding

 
219670_at 0.412 5.782 2.166 4.661e-02 0.314 -4.106 BEND5 BEN domain containing 5 1 -48966126 NM_024603 1p33 Hs.475348 5

Golgi apparatus

 
229364_at 0.219 5.156 2.166 4.662e-02 0.314 -4.106 LOC646870 hypothetical protein LOC646870 1   AI979338 1q25.1        
211175_at 0.149 5.555 2.166 4.662e-02 0.314 -4.106 GPR45 G protein-coupled receptor 45 2 105224631 U92642 2q11.1-q12 Hs.590903 7

receptor activity

G-protein coupled receptor activity

protein binding

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

integral to membrane

 
203711_s_at -0.261 7.456 -2.166 4.663e-02 0.314 -4.106 HIBCH 3-hydroxyisobutyryl-Coenzyme A hydrolase 2 -190777604 NM_014362 2q32.2 Hs.656685 8

3-hydroxyisobutyryl-CoA hydrolase activity

protein binding

mitochondrion

metabolic process

branched chain family amino acid catabolic process

hydrolase activity

Valine, leucine and isoleucine degradation

beta-Alanine metabolism

Propanoate metabolism

Metabolic pathways

233782_at 0.236 5.309 2.166 4.663e-02 0.314 -4.106 DCAF7 DDB1 and CUL4 associated factor 7 17 58981553 AU147133 17q23.3 Hs.410596 11

protein binding

cytoplasm

 
219555_s_at -0.287 4.631 -2.165 4.665e-02 0.314 -4.106 CENPN centromere protein N 16 79597603, 79597603, 79597603 NM_018455 16q23.2 Hs.55028 9

chromosome, centromeric region

condensed chromosome kinetochore

nucleus

chromosome

 
1557918_s_at -0.199 5.117 -2.165 4.666e-02 0.314 -4.107 SLC16A1 solute carrier family 16, member 1 (monocarboxylic acid transporter 1) 1 -113255992 AU131482 1p12 Hs.75231 43

protein binding

membrane fraction

plasma membrane

transport

mevalonate transmembrane transporter activity

symporter activity

secondary active monocarboxylate transmembrane transporter activity

organic anion transport

mevalonate transport

integral to membrane

 
217227_x_at 0.186 5.527 2.165 4.667e-02 0.314 -4.107 IGL@ immunoglobulin lambda locus 22   X93006 22q11.1-q11.2 Hs.449585 Hs.561078 20    
232345_at 0.174 4.856 2.165 4.668e-02 0.314 -4.107 C18orf8 chromosome 18 open reading frame 8 18 19337459 AU158529 18q11.2 Hs.464779 4    
211087_x_at -0.254 5.313 -2.165 4.672e-02 0.314 -4.108 MAPK14 mitogen-activated protein kinase 14 6 36103431, 36103431 Z25432 6p21.3-p21.2 Hs.485233 561

DNA damage checkpoint

nucleotide binding

spindle pole

angiogenesis

chondrocyte differentiation

protein serine/threonine kinase activity

protein serine/threonine kinase activity

MAP kinase activity

MAP kinase kinase activity

protein binding

ATP binding

cell

nucleus

nucleoplasm

cytoplasm

cytosol

glucose metabolic process

protein amino acid phosphorylation

cell motion

chemotaxis

response to stress

protein kinase cascade

Ras protein signal transduction

skeletal muscle tissue development

MP kinase activity

transferase activity

fatty acid oxidation

lipopolysaccharide-mediated signaling pathway

response to muramyl dipeptide

response to lipopolysaccharide

positive regulation of erythrocyte differentiation

positive regulation of transcription from RNA polymerase II promoter

MAPK signaling pathway

VEGF signaling pathway

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

T cell receptor signaling pathway

Fc epsilon RI signaling pathway

Leukocyte transendothelial migration

Neurotrophin signaling pathway

GnRH signaling pathway

Amyotrophic lateral sclerosis (ALS)

Epithelial cell signaling in Helicobacter pylori infection

226240_at -0.264 7.145 -2.164 4.673e-02 0.314 -4.108 TADA2B transcriptional adaptor 2 (ADA2 homolog, yeast)-beta 4 7096056 AI862537 4p16.1 Hs.518614 4

DNA binding

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
212624_s_at 0.256 6.051 2.164 4.673e-02 0.314 -4.108 CHN1 chimerin (chimaerin) 1 2 -175372287 BF339445 2q31.1 Hs.654534 21

SH3/SH2 adaptor activity

GTPase activator activity

protein binding

intracellular

intracellular signaling cascade

zinc ion binding

diacylglycerol binding

metal ion binding

 
1553483_at 0.180 5.070 2.164 4.673e-02 0.314 -4.108 TSGA10IP testis specific, 10 interacting protein 11 65469690 NM_152762 11q13.1 Hs.350671 2    
233656_s_at -0.276 5.605 -2.164 4.675e-02 0.314 -4.108 VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) 2 -63973170 AL359939 2p13-p14 Hs.48499 8

protein binding

protein transport

retrograde transport, endosome to Golgi

 
209716_at 0.227 6.491 2.164 4.675e-02 0.314 -4.108 CSF1 colony stimulating factor 1 (macrophage) 1 110254755, 110254755, 110254755 M37435 1p21-p13 Hs.591402 123

positive regulation of cell-matrix adhesion

reproductive developmental process

cytokine activity

macrophage colony stimulating factor receptor binding

extracellular region

extracellular space

plasma membrane

positive regulation of cell proliferation

positive regulation of gene expression

positive regulation of foam cell differentiation

integral to membrane

hemopoiesis

cell differentiation

positive regulation of cell migration

positive regulation of cellular protein metabolic process

positive regulation of mononuclear cell proliferation

monocyte activation

protein homodimerization activity

receptor complex

positive regulation of monocyte differentiation

positive regulation of protein kinase activity

perinuclear region of cytoplasm

Cytokine-cytokine receptor interaction

Hematopoietic cell lineage

219714_s_at 0.486 5.935 2.164 4.675e-02 0.314 -4.108 CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 3 54131732 NM_018398 3p21.1 Hs.656687 9

voltage-gated ion channel activity

calcium channel activity

calcium ion binding

ion transport

calcium ion transport

membrane

integral to membrane

MAPK signaling pathway

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

213389_at -0.255 6.844 -2.164 4.675e-02 0.314 -4.108 ZNF592 zinc finger protein 592 15 83092821 BF508616 15q25.3 Hs.79347 7

DNA binding

protein binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
213897_s_at 0.291 8.690 2.164 4.681e-02 0.314 -4.109 MRPL23 mitochondrial ribosomal protein L23 11 1925077 AI832239 11p15.5-p15.4 Hs.3254 11

nucleotide binding

RNA binding

structural constituent of ribosome

intracellular

mitochondrion

mitochondrial large ribosomal subunit

ribosome

translation

 
236046_at -0.450 5.952 -2.163 4.684e-02 0.314 -4.110 FLJ44896 FLJ44896 protein 5   AA781880 5p15.33 Hs.711993      
229664_at -0.320 5.400 -2.163 4.686e-02 0.314 -4.110 MAPK8 mitogen-activated protein kinase 8 10 49279692 AI379407 10q11.22 Hs.138211 387

nucleotide binding

protein serine/threonine kinase activity

JUN kinase activity

MAP kinase activity

protein binding

ATP binding

cytosol

cell motion

response to stress

signal transduction

JUN phosphorylation

activation of pro-apoptotic gene products

response to UV

transferase activity

negative regulation of apoptosis

MAPK signaling pathway

ErbB signaling pathway

Wnt signaling pathway

Focal adhesion

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

Fc epsilon RI signaling pathway

Neurotrophin signaling pathway

Insulin signaling pathway

GnRH signaling pathway

Adipocytokine signaling pathway

Type II diabetes mellitus

Epithelial cell signaling in Helicobacter pylori infection

Pathways in cancer

Colorectal cancer

Pancreatic cancer

201117_s_at 0.394 7.175 2.163 4.686e-02 0.314 -4.110 CPE carboxypeptidase E 4 166519546 NM_001873 4q32.3 Hs.75360 39

metallocarboxypeptidase activity

extracellular region

plasma membrane

protein modification process

proteolysis

neuropeptide signaling pathway

metabolic process

peptidase activity

metallopeptidase activity

zinc ion binding

insulin processing

metal ion binding

Type I diabetes mellitus

1559518_at 0.178 3.178 2.163 4.688e-02 0.314 -4.111 HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 11 43658718 BM460264 11p11.2 Hs.132513 13

fibronectin binding

estradiol 17-beta-dehydrogenase activity

binding

collagen binding

endoplasmic reticulum

steroid biosynthetic process

heparin binding

positive regulation of cell-substrate adhesion

membrane

integral to membrane

oxidoreductase activity

extracellular matrix organization

extracellular matrix

oxidation reduction

Androgen and estrogen metabolism

Biosynthesis of unsaturated fatty acids

Metabolic pathways

1556035_s_at -0.258 7.248 -2.163 4.689e-02 0.314 -4.111 ZNF207 zinc finger protein 207 17 27701269 AI201248 17q11.2 Hs.500775 7

transcription factor activity

intracellular

nucleus

nucleolus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
221828_s_at -0.219 6.195 -2.163 4.689e-02 0.314 -4.111 FAM125B family with sequence similarity 125, member B 9 128128948, 128128948 AK024432 9q33.3 Hs.162659 4

endosome

protein transport

membrane

Endocytosis

220023_at 0.182 4.280 2.162 4.691e-02 0.314 -4.111 APOB48R apolipoprotein B48 receptor 16 28413493 NM_018690 16p11 Hs.200333 4

receptor activity

plasma membrane

lipid metabolic process

triglyceride metabolic process

lipid transport

steroid metabolic process

cholesterol metabolic process

very-low-density lipoprotein receptor activity

very-low-density lipoprotein particle

low-density lipoprotein particle

chylomicron

 
212987_at -0.220 9.153 -2.162 4.692e-02 0.314 -4.111 FBXO9 F-box protein 9 6 53037754, 53038215, 53043729 AL031178 6p12.3-p11.2 Hs.216653 9

ubiquitin ligase complex

ubiquitin-protein ligase activity

protein ubiquitination

modification-dependent protein catabolic process

 
235997_at 0.156 6.430 2.162 4.693e-02 0.314 -4.112 ZNF74 zinc finger protein 74 22 19078479 AI554700 22q11.2 22q11.21 Hs.517418 12

DNA binding

RNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

multicellular organismal development

zinc ion binding

metal ion binding

 
219088_s_at -0.203 5.828 -2.162 4.696e-02 0.314 -4.112 ZNF576 zinc finger protein 576 19 48792383, 48792577 AA639585 19q13.31 Hs.11110 5

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
211398_at 0.212 3.914 2.162 4.696e-02 0.314 -4.112 FGFR2 fibroblast growth factor receptor 2 10 -123231358, -123231358, -123227834, -123227834, -123227834, -123227834, -123227833 AB030075 10q26 Hs.533683 232

nucleotide binding

receptor activity

fibroblast growth factor receptor activity

protein binding

ATP binding

extracellular region

plasma membrane

plasma membrane

protein amino acid phosphorylation

heparin binding

fibroblast growth factor receptor signaling pathway

cell surface

integral to membrane

cell growth

transferase activity

MAPK signaling pathway

Endocytosis

Regulation of actin cytoskeleton

Pathways in cancer

Prostate cancer

1554883_a_at 0.302 4.325 2.161 4.700e-02 0.315 -4.113 ERCC8 excision repair cross-complementing rodent repair deficiency, complementation group 8 5 -60205415 BC009793 5q12.1 Hs.435237 24

nucleotide-excision repair complex

protein polyubiquitination

DNA helicase activity

ubiquitin-protein ligase activity

soluble fraction

nucleus

nucleoplasm

transcription-coupled nucleotide-excision repair

response to DNA damage stimulus

response to oxidative stress

response to oxidative stress

DNA-dependent ATPase activity

response to UV

response to X-ray

nuclear matrix

protein complex binding

regulation of transcription

protein autoubiquitination

Nucleotide excision repair

Ubiquitin mediated proteolysis

214183_s_at 0.496 4.083 2.161 4.705e-02 0.315 -4.114 TKTL1 transketolase-like 1 X 153177220, 153186602 X91817 Xq28 Hs.102866 21

transketolase activity

calcium ion binding

nucleus

cytoplasm

glucose catabolic process

thiamin metabolic process

metabolic process

transferase activity

Pentose phosphate pathway

Carbon fixation in photosynthetic organisms

Biosynthesis of phenylpropanoids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of plant hormones

Metabolic pathways

1553086_at -0.180 2.393 -2.161 4.705e-02 0.315 -4.114 C11orf40 chromosome 11 open reading frame 40 11 -4549228 NM_144663 11p15.5 Hs.350556      
216968_at 0.189 5.424 2.161 4.706e-02 0.315 -4.114 MASP2 mannan-binding lectin serine peptidase 2 1 -11027441, -11009166 Y18284 1p36.3-p36.2 Hs.655645 51

complement activation, lectin pathway

complement activation, lectin pathway

serine-type endopeptidase activity

calcium ion binding

extracellular region

extracellular region

proteolysis

complement activation, classical pathway

peptidase activity

calcium-dependent protein binding

Complement and coagulation cascades

201307_at 0.366 6.302 2.161 4.707e-02 0.315 -4.114 SEPT11 septin 11 4 78089918 AL534972 4q21.1 Hs.128199 16

nucleotide binding

stress fiber

protein binding

GTP binding

cell cycle

septin complex

protein heterooligomerization

cell division

 
224566_at -0.535 10.652 -2.160 4.712e-02 0.315 -4.115 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 11 64946844, 64946844 AI042152 11q13.1 Hs.523789 Hs.648467 6    
223955_at -0.220 4.139 -2.160 4.712e-02 0.315 -4.115 EFCAB4B EF-hand calcium binding domain 4B 12 -3627369, -3619818, -3594754 BC004524 12p13.32 Hs.504534 Hs.719531 6

calcium ion binding

 
224980_at 0.272 5.646 2.160 4.712e-02 0.315 -4.115 LEMD2 LEM domain containing 2 6 -33846968, -33846968 BF431373 6p21.31 Hs.444845 4

nucleus

integral to nuclear inner membrane

membrane

integral to membrane

nuclear membrane

 
234995_at 0.186 3.243 2.160 4.714e-02 0.315 -4.116 CCDC52 coiled-coil domain containing 52 3 -114644254 AA668779 3q13.2 Hs.477144 8    
214751_at 0.430 4.058 2.160 4.715e-02 0.315 -4.116 ZNF468 zinc finger protein 468 19 -58033596 BE541042 19q13.41 Hs.467223 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
204501_at 0.368 4.315 2.160 4.716e-02 0.315 -4.116 NOV nephroblastoma overexpressed gene 8 120497732 NM_002514 8q24.1 Hs.235935 40

regulation of cell growth

insulin-like growth factor binding

extracellular region

growth factor activity

 
236703_at -0.522 6.651 -2.160 4.716e-02 0.315 -4.116 NT5C2 5'-nucleotidase, cytosolic II 10 -104835929 BF114733 10q24.32-q24.33 Hs.97439 12

nucleotide binding

magnesium ion binding

protein binding

cytoplasm

cytosol

5'-nucleotidase activity

5'-nucleotidase activity

nucleotide metabolic process

hydrolase activity

Purine metabolism

Pyrimidine metabolism

Nicotinate and nicotinamide metabolism

Biosynthesis of alkaloids derived from histidine and purine

Metabolic pathways

217421_at 0.192 5.266 2.160 4.717e-02 0.315 -4.116 PIWIL2 piwi-like 2 (Drosophila) 8 22188754, 22189024 AK000397 8p21.3 Hs.661109 7

RNA 5'-end processing

protein binding

cytoplasm

meiosis

meiotic prophase I

multicellular organismal development

spermatogenesis

cell differentiation

germ-line stem cell maintenance

gene silencing by RNA

chromatoid body

piRNA binding

piRNA metabolic process

DNA methylation during gametogenesis

P granule

positive regulation of translation

oogenesis

Dorso-ventral axis formation

238655_at 0.173 4.991 2.159 4.720e-02 0.315 -4.117 ACAD10 acyl-Coenzyme A dehydrogenase family, member 10 12 110608239, 110608239 AL530994 12q24.12 Hs.331141 6

acyl-CoA dehydrogenase activity

metabolic process

electron carrier activity

hydrolase activity

FAD binding

 
204581_at 0.244 4.315 2.159 4.721e-02 0.315 -4.117 CD22 CD22 molecule 19 40511918 NM_001771 19q13.1 Hs.579691 46

protein binding

sugar binding

plasma membrane

cell adhesion

integral to membrane

Cell adhesion molecules (CAMs)

Hematopoietic cell lineage

B cell receptor signaling pathway

205335_s_at -0.182 8.585 -2.159 4.721e-02 0.315 -4.117 SRP19 signal recognition particle 19kDa 5 112224891 NM_003135 5q21-q22 Hs.637001 14

nucleolus

cytoplasm

signal recognition particle, endoplasmic reticulum targeting

SRP-dependent cotranslational protein targeting to membrane

7S RNA binding

response to drug

Protein export

230442_at 0.285 3.783 2.159 4.722e-02 0.315 -4.117 MTHFSD methenyltetrahydrofolate synthetase domain containing 16 -85121283, -85121283, -85121282 AI700675 16q24.1 Hs.343627 2

nucleotide binding

RNA binding

ATP binding

folic acid and derivative biosynthetic process

5-formyltetrahydrofolate cyclo-ligase activity

 
202852_s_at -0.231 5.190 -2.159 4.723e-02 0.315 -4.117 AAGAB alpha- and gamma-adaptin binding protein 15 -65280420 NM_024666 15q22.33-q23 Hs.254642 12

cytoplasm

protein transport

 
212148_at -0.328 8.342 -2.159 4.726e-02 0.316 -4.118 PBX1 pre-B-cell leukemia homeobox 1 1 162795425 AL049381 1q23 Hs.557097 56

transcription factor activity

protein binding

nucleus

nucleolus

cytoplasm

regulation of transcription, DNA-dependent

C21-steroid hormone biosynthetic process

sex determination

cell differentiation

sequence-specific DNA binding

 
235566_at -0.349 4.567 -2.158 4.728e-02 0.316 -4.118 TMF1 TATA element modulatory factor 1 3 -69151667 AW591660 3p21-p12 Hs.267632 15

Golgi membrane

DNA binding

RNA polymerase II transcription factor activity

transcription cofactor activity

protein binding

nucleus

cytoplasm

Golgi apparatus

regulation of transcription, DNA-dependent

transcription from RNA polymerase II promoter

membrane

 
208561_at -0.343 4.362 -2.158 4.729e-02 0.316 -4.118 ABCC9 ATP-binding cassette, sub-family C (CFTR/MRP), member 9 12 -21849374, -21841590 NM_020297 12p12.1 Hs.446050 35

nucleotide binding

receptor activity

transporter activity

ATP binding

transport

sulfonylurea receptor activity

ATP-sensitive potassium channel complex

potassium ion import

potassium channel regulator activity

membrane

integral to membrane

ATPase activity

ATPase activity, coupled to transmembrane movement of substances

defense response to virus

ABC transporters

205084_at -0.394 5.876 -2.158 4.729e-02 0.316 -4.118 BCAP29 B-cell receptor-associated protein 29 7 107007657, 107008439 NM_018844 7q22-q31 Hs.303787 12

endoplasmic reticulum

intracellular protein transport

apoptosis

membrane

integral to membrane

vesicle-mediated transport

 
232289_at -0.557 8.438 -2.158 4.730e-02 0.316 -4.118 KCNJ12 potassium inwardly-rectifying channel, subfamily J, member 12 17 21220291 BF237871 17p11.2 Hs.200629 24

inward rectifier potassium channel activity

voltage-gated ion channel activity

protein binding

ion transport

potassium ion transport

muscle contraction

blood circulation

regulation of heart contraction

ion channel inhibitor activity

potassium channel regulator activity

membrane

integral to membrane

PDZ domain binding

T-tubule

dendrite

potassium ion binding

cell soma

 
226434_at 0.236 6.539 2.158 4.730e-02 0.316 -4.118 C7orf47 chromosome 7 open reading frame 47 7 -99870847 BF000655 7q22.1 Hs.413359 3    
222588_s_at -0.235 6.003 -2.158 4.730e-02 0.316 -4.118 C11orf57 chromosome 11 open reading frame 57 11 111450177 AA024582 11q23.1 Hs.195060 6    
201387_s_at 0.736 7.216 2.158 4.732e-02 0.316 -4.119 UCHL1 ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) 4 40953654 NM_004181 4p14 Hs.518731 94

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

protein binding

intracellular

nucleus

nucleolus

cytoplasm

cytoplasm

cytosol

ubiquitin-dependent protein catabolic process

response to stress

axon target recognition

adult walking behavior

peptidase activity

omega peptidase activity

cell proliferation

protein deubiquitination

ligase activity

axon transport of mitochondrion

axon

eating behavior

cell soma

ubiquitin binding

neuromuscular process

Parkinson's disease

207191_s_at 0.395 5.209 2.158 4.733e-02 0.316 -4.119 ISLR immunoglobulin superfamily containing leucine-rich repeat 15 72253139, 72253957 NM_005545 15q23-q24 Hs.699822 Hs.710506 6

protein binding

extracellular region

cell adhesion

 
235552_at -0.188 6.379 -2.158 4.734e-02 0.316 -4.119 METTL14 methyltransferase like 14 4 119826021 AA354181 4q26 Hs.657806 3

RNA methylation

nucleus

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

methyltransferase activity

mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity

transferase activity

 
227207_x_at -0.217 6.302 -2.158 4.734e-02 0.316 -4.119 ZNF213 zinc finger protein 213 16 3125057, 3125134 BF510572 16p13.3 Hs.115284 7

transcription factor activity

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
208523_x_at 0.206 4.866 2.158 4.734e-02 0.316 -4.119 HIST1H2BI histone cluster 1, H2bi 6 26381182 NM_003525 6p21.3 Hs.553506 8  

Systemic lupus erythematosus

231285_at 0.387 4.497 2.157 4.735e-02 0.316 -4.119 STT3B STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae) 3 31549494 AI458583 3p23 Hs.475812 9

dolichyl-diphosphooligosaccharide-protein glycotransferase activity

protein binding

endoplasmic reticulum

protein amino acid glycosylation

membrane

integral to membrane

transferase activity

N-Glycan biosynthesis

Metabolic pathways

244844_at -0.171 3.496 -2.157 4.737e-02 0.316 -4.120 MRS2 MRS2 magnesium homeostasis factor homolog (S. cerevisiae) 6 24511131 AI224894 6p22.3-p22.1 Hs.719256 9

magnesium ion binding

mitochondrion

mitochondrial inner membrane

ion transport

membrane

integral to membrane

metal ion transport

metal ion transmembrane transporter activity

 
213364_s_at 0.321 6.728 2.157 4.738e-02 0.316 -4.120 SNX1 sorting nexin 1 15 62175229 AI052536 15q22.31 Hs.188634 28

protein binding

cytoplasm

endosome

Golgi apparatus

intracellular protein transport

endocytosis

cell communication

protein transporter activity

membrane

phosphoinositide binding

 
214780_s_at 0.195 6.034 2.157 4.740e-02 0.316 -4.120 MYO9B myosin IXB 19 17047590 AK002201 19p13.1 Hs.123198 36

microfilament motor activity

microfilament motor activity

nucleotide binding

actin binding

GTPase activator activity

Rho GTPase activator activity

calmodulin binding

ATP binding

intracellular

cytoplasm

cell cortex

intracellular signaling cascade

zinc ion binding

myosin complex

ATPase activity

diacylglycerol binding

actin filament-based movement

filamentous actin

ARF protein signal transduction

protein homodimerization activity

ADP binding

metal ion binding

perinuclear region of cytoplasm

 
204674_at 0.216 6.129 2.157 4.740e-02 0.316 -4.120 LRMP lymphoid-restricted membrane protein 12 25096507 NM_006152 12p12.1 Hs.124922 9

cytoplasm

endoplasmic reticulum

endoplasmic reticulum membrane

integral to plasma membrane

vesicle targeting

vesicle fusion

membrane

 
230129_at -0.315 5.099 -2.157 4.741e-02 0.316 -4.121 PSTK phosphoseryl-tRNA kinase 10 124729545 BF589448 10q26.13 Hs.281004 4

nucleotide binding

magnesium ion binding

ATP binding

translation

kinase activity

transferase activity

phosphotransferase activity, alcohol group as acceptor

Aminoacyl-tRNA biosynthesis

235773_at 0.244 3.718 2.157 4.743e-02 0.316 -4.121 ZIK1 zinc finger protein interacting with K protein 1 homolog (mouse) 19 62787439 AW029293 19q13.43 Hs.454830 3

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
228497_at 0.253 3.684 2.156 4.745e-02 0.316 -4.121 SLC22A15 solute carrier family 22, member 15 1 116320641 AI279062 1p13.1 Hs.125482 4

transporter activity

ion transport

membrane

integral to membrane

 
214968_at 0.188 4.268 2.156 4.747e-02 0.316 -4.122 DDX51 DEAD (Asp-Glu-Ala-Asp) box polypeptide 51 12 -131187092 AV694312 12q24.33 Hs.445168 6

nucleotide binding

RNA binding

helicase activity

ATP binding

nucleus

nucleolus

rRNA processing

ATP-dependent helicase activity

hydrolase activity

 
1560062_at 0.175 4.717 2.156 4.748e-02 0.316 -4.122 SLC29A2 solute carrier family 29 (nucleoside transporters), member 2 11 -65886567 BM709337 11q13 Hs.569017 26

nucleoside transmembrane transporter activity

nucleus

nucleolus

plasma membrane

integral to plasma membrane

nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

transport

cell proliferation

nucleoside transport

 
226714_at 0.194 6.773 2.156 4.750e-02 0.316 -4.122 SAMD4B sterile alpha motif domain containing 4B 19 44524947 AA149818 19q13.2 Hs.612332 8

protein binding

 
214151_s_at -0.278 7.368 -2.156 4.752e-02 0.316 -4.122 CCPG1 cell cycle progression 1 15 -53434729, -53434729 AU144243 15q21.1 Hs.285051 5

cell cycle

membrane

integral to membrane

 
40837_at -0.244 7.472 -2.155 4.754e-02 0.316 -4.123 TLE2 transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila) 19 -2948636, -2948636, -2948636 M99436 19p13.3 Hs.332173 15

protein binding

nucleus

signal transduction

organ morphogenesis

Wnt receptor signaling pathway

regulation of transcription

 
206694_at 0.220 4.956 2.155 4.754e-02 0.316 -4.123 PNLIPRP1 pancreatic lipase-related protein 1 10 118340479 NM_006229 10q25.3 Hs.73923 3

triacylglycerol lipase activity

extracellular region

lipid catabolic process

hydrolase activity

Glycerolipid metabolism

Metabolic pathways

1559052_s_at 0.306 4.180 2.155 4.756e-02 0.316 -4.123 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 3 197951124 U25975 3q29 Hs.518530 80

nucleotide binding

protein serine/threonine kinase activity

ATP binding

nucleus

cytoplasm

cytosol

negative regulation of protein kinase activity

apoptosis

signal transduction

membrane

transferase activity

regulation of growth

identical protein binding

interspecies interaction between organisms

protein amino acid autophosphorylation

perinuclear region of cytoplasm

MAPK signaling pathway

ErbB signaling pathway

Axon guidance

Focal adhesion

T cell receptor signaling pathway

Regulation of actin cytoskeleton

Renal cell carcinoma

210066_s_at -0.600 3.326 -2.155 4.757e-02 0.316 -4.123 AQP4 aquaporin 4 18 -22686004, -22686004 D63412 18q11.2-q12.1 Hs.315369 60

transporter activity

water transporter activity

integral to plasma membrane

transport

nervous system development

excretion

membrane

 
228219_s_at 0.279 6.969 2.155 4.757e-02 0.316 -4.123 UPB1 ureidopropionase, beta 22 23221250 AI770035 22q11.2 Hs.474388 10

beta-ureidopropionase activity

beta-ureidopropionase activity

cytoplasm

cytosol

nitrogen compound metabolic process

zinc ion binding

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds

metal ion binding

Pyrimidine metabolism

beta-Alanine metabolism

Pantothenate and CoA biosynthesis

Drug metabolism - other enzymes

Metabolic pathways

227566_at 0.185 3.580 2.155 4.759e-02 0.316 -4.124 NTM neurotrimin 11 130745580, 131285921, 131285921, 131285921 AW085558 11q25 Hs.504352 9

protein binding

plasma membrane

cell adhesion

neuron recognition

anchored to membrane

 
238022_at -0.856 4.898 -2.155 4.760e-02 0.316 -4.124 CRNDE colorectal neoplasia differentially expressed (non-protein coding) 16   AA954994 16q12.2 Hs.237396 1    
225140_at -0.252 3.678 -2.155 4.760e-02 0.316 -4.124 KLF3 Kruppel-like factor 3 (basic) 4 38342184 BF438116 4p14 Hs.298658 12

transcription factor activity

intracellular

nucleus

multicellular organismal development

zinc ion binding

regulation of transcription

metal ion binding

 
1553583_a_at 0.298 5.731 2.155 4.761e-02 0.316 -4.124 THRSP thyroid hormone responsive (SPOT14 homolog, rat) 11 77452554 NM_003251 11q13.5 Hs.591969 12

protein binding

nucleus

lipid metabolic process

 
201006_at 0.209 6.091 2.154 4.763e-02 0.316 -4.125 PRDX2 peroxiredoxin 2 19 -12772426, -12768633 NM_005809 19p13.2 Hs.432121 52

cytoplasm

anti-apoptosis

response to oxidative stress

response to oxidative stress

thioredoxin peroxidase activity

oxidoreductase activity

regulation of apoptosis

cell redox homeostasis

oxidation reduction

 
220954_s_at -0.354 6.362 -2.154 4.766e-02 0.317 -4.125 PILRB paired immunoglobin-like type 2 receptor beta 7 99771672, 99793561 NM_013440 7q22.1 Hs.632314 10

receptor activity

protein binding

integral to plasma membrane

activation of transmembrane receptor protein tyrosine kinase activity

membrane

 
206464_at 0.281 4.353 2.154 4.767e-02 0.317 -4.125 BMX BMX non-receptor tyrosine kinase X 15428820, 15435351 NM_001721 Xp22.2 Hs.495731 37

nucleotide binding

non-membrane spanning protein tyrosine kinase activity

signal transducer activity

protein binding

ATP binding

cytoplasm

centrosome

protein amino acid phosphorylation

intracellular signaling cascade

mesoderm development

zinc ion binding

transferase activity

metal ion binding

 
239569_at 0.233 5.085 2.154 4.768e-02 0.317 -4.125 FLJ31485 hypothetical protein LOC440119 12   AI803208 12q24.33 Hs.288262 1    
215844_at 0.308 5.975 2.154 4.770e-02 0.317 -4.126 TNPO2 transportin 2 19 -12671008, -12671008, -12671008 AK022217 19p13.2 Hs.416049 Hs.714402 13

protein import into nucleus, docking

protein binding

nucleus

nuclear pore

cytoplasm

intracellular protein transport

nuclear localization sequence binding

protein transporter activity

 
1567271_at 0.192 3.203 2.154 4.771e-02 0.317 -4.126 OR4C1P olfactory receptor, family 4, subfamily C, member 1 pseudogene 11   X64985 11q11 Hs.550274 1    
238532_at -0.336 6.974 -2.153 4.772e-02 0.317 -4.126 DPF3 D4, zinc and double PHD fingers, family 3 14 -72206412 AI125562 14q24.3-q31.1 Hs.162868 9

protein binding

intracellular

nucleus

biological_process

zinc ion binding

chromatin modification

regulation of transcription

metal ion binding

 
203372_s_at 0.307 4.033 2.153 4.773e-02 0.317 -4.126 SOCS2 suppressor of cytokine signaling 2 12 92487728 AB004903 12q Hs.485572 40

regulation of cell growth

SH3/SH2 adaptor activity

growth hormone receptor binding

prolactin receptor binding

insulin-like growth factor receptor binding

protein binding

cytoplasm

anti-apoptosis

intracellular signaling cascade

JAK-STAT cascade

JAK pathway signal transduction adaptor activity

negative regulation of signal transduction

modification-dependent protein catabolic process

response to estradiol stimulus

growth hormone receptor signaling pathway

Jak-STAT signaling pathway

Insulin signaling pathway

Type II diabetes mellitus

215326_at 0.224 4.261 2.153 4.773e-02 0.317 -4.126 PAK4 p21 protein (Cdc42/Rac)-activated kinase 4 19 44308259 AB032968 19q13.2 Hs.20447 32

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

Golgi apparatus

protein amino acid phosphorylation

cell motion

signal transduction

transferase activity

ErbB signaling pathway

Axon guidance

Focal adhesion

T cell receptor signaling pathway

Regulation of actin cytoskeleton

Renal cell carcinoma

201526_at 0.259 8.215 2.153 4.779e-02 0.317 -4.128 ARF5 ADP-ribosylation factor 5 7 127015752 NM_001662 7q31.3 Hs.653202 18

nucleotide binding

GTPase activity

GTP binding

intracellular

cytoplasm

Golgi apparatus

plasma membrane

small GTPase mediated signal transduction

protein transport

vesicle-mediated transport

 
206208_at 0.270 6.232 2.152 4.782e-02 0.317 -4.128 CA4 carbonic anhydrase IV 17 55582083 NM_000717 17q23 Hs.89485 30

carbonate dehydratase activity

membrane fraction

plasma membrane

one-carbon metabolic process

visual perception

zinc ion binding

lyase activity

anchored to membrane

metal ion binding

response to stimulus

Nitrogen metabolism

220388_at 0.220 4.128 2.152 4.783e-02 0.317 -4.128 FER1L4 fer-1-like 4 (C. elegans) 20 -33609920 NM_024777 20q11.22 Hs.72222 7

membrane

integral to membrane

 
238046_x_at 0.244 5.057 2.152 4.786e-02 0.317 -4.129 PWWP2B PWWP domain containing 2B 10 134060691 AI800015 10q26.3 Hs.527751 5    
242600_at -0.465 8.354 -2.152 4.787e-02 0.317 -4.129 FRMD3 FERM domain containing 3 9 -85052126 AA746863 9q21.32 Hs.709357 7

binding

cytoplasm

cytoskeleton

cytoskeletal protein binding

membrane

integral to membrane

extrinsic to membrane

 
200907_s_at -0.519 9.408 -2.152 4.789e-02 0.318 -4.129 PALLD palladin, cytoskeletal associated protein 4 169654791 AU157932 4q32.3 Hs.151220 40

actin binding

protein binding

nucleus

cytoplasm

cytoskeleton

actin filament

cytoskeleton organization

muscle alpha-actinin binding

 
209018_s_at -0.232 9.533 -2.151 4.791e-02 0.318 -4.130 PINK1 PTEN induced putative kinase 1 1 20832534 BF432478 1p36 Hs.389171 105

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

ATP binding

mitochondrion

mitochondrial outer membrane

protein amino acid phosphorylation

response to stress

protein kinase cascade

membrane

integral to membrane

transferase activity

positive regulation of synaptic transmission, dopaminergic

positive regulation of dopamine secretion

Parkinson's disease

222449_at -0.382 7.197 -2.151 4.792e-02 0.318 -4.130 PMEPA1 prostate transmembrane protein, androgen induced 1 20 -55656857, -55656857, -55656857 AL035541 20q13.31 20q13.31-q13.33 Hs.517155 12

molecular_function

plasma membrane

integral to membrane

androgen receptor signaling pathway

WW domain binding

 
207391_s_at 0.196 6.953 2.151 4.792e-02 0.318 -4.130 PIP5K1A phosphatidylinositol-4-phosphate 5-kinase, type I, alpha 1 149437644 NM_003557 1q22-q24 Hs.655131 Hs.707569 20

nucleotide binding

ATP binding

cellular_component

Golgi apparatus

Golgi stack

plasma membrane

glycerophospholipid metabolic process

signal transduction

kinase activity

1-phosphatidylinositol-4-phosphate 5-kinase activity

phosphorylation

transferase activity

phosphatidylinositol metabolic process

Inositol phosphate metabolism

Metabolic pathways

Phosphatidylinositol signaling system

Endocytosis

Fc gamma R-mediated phagocytosis

Regulation of actin cytoskeleton

1560833_at -0.236 3.549 -2.151 4.793e-02 0.318 -4.130 LOC643648 hypothetical protein LOC643648 9   BG189393 9p11.2 Hs.640178 1    
218073_s_at -0.344 3.461 -2.151 4.793e-02 0.318 -4.130 TMEM48 transmembrane protein 48 1 -54005975 NM_018087 1p32.3 Hs.476525 10

nucleus

nuclear pore

protein transport

membrane

integral to membrane

structural constituent of nuclear pore

nuclear pore distribution

mRNA transport

nuclear pore complex assembly

intracellular protein transmembrane transport

 
218477_at 0.335 6.246 2.151 4.794e-02 0.318 -4.130 TMEM14A transmembrane protein 14A 6 52643842 NM_014051 6p12.2 Hs.94896 3

membrane

integral to membrane

 
1557073_s_at -0.298 5.441 -2.151 4.795e-02 0.318 -4.130 TTBK2 tau tubulin kinase 2 15 -40823835 AK074481 15q15.2 Hs.659846 Hs.713940 12

nucleotide binding

protein serine/threonine kinase activity

ATP binding

cell death

transferase activity

peptidyl-serine phosphorylation

 
208542_x_at 0.179 2.328 2.151 4.796e-02 0.318 -4.131 ZNF208 zinc finger protein 208 19 -21940736 NM_007153 19p12 Hs.541334 5

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
208734_x_at -0.381 8.298 -2.151 4.798e-02 0.318 -4.131 RAB2A RAB2A, member RAS oncogene family 8 61592112 M28213 8q12.1 Hs.369017 19

nucleotide binding

GTPase activity

GTP binding

endoplasmic reticulum

Golgi apparatus

ER to Golgi vesicle-mediated transport

small GTPase mediated signal transduction

protein transport

membrane

vesicle-mediated transport

melanosome

 
201435_s_at -0.446 8.273 -2.151 4.798e-02 0.318 -4.131 EIF4E eukaryotic translation initiation factor 4E 4 -100018629, -100018629 AW268640 4q21-q25 Hs.249718 143

RNA cap binding

translation initiation factor activity

protein binding

cytoplasm

cytosol

translational initiation

regulation of translation

eukaryotic translation initiation factor 4F complex

interspecies interaction between organisms

mTOR signaling pathway

Insulin signaling pathway

211536_x_at -0.196 5.661 -2.150 4.799e-02 0.318 -4.131 MAP3K7 mitogen-activated protein kinase kinase kinase 7 6 -91282073, -91282073 AB009358 6q16.1-q16.3 Hs.719192 114

nucleotide binding

magnesium ion binding

positive regulation of T cell cytokine production

protein serine/threonine kinase activity

MAP kinase kinase kinase activity

protein tyrosine kinase activity

protein binding

ATP binding

cytosol

protein amino acid phosphorylation

signal transduction

transforming growth factor beta receptor signaling pathway

activation of NF-kappaB-inducing kinase activity

transferase activity

positive regulation of interleukin-2 production

T cell receptor signaling pathway

positive regulation of T cell activation

MAPK signaling pathway

Wnt signaling pathway

Adherens junction

Toll-like receptor signaling pathway

RIG-I-like receptor signaling pathway

T cell receptor signaling pathway

207352_s_at -0.247 4.057 -2.150 4.799e-02 0.318 -4.131 GABRB2 gamma-aminobutyric acid (GABA) A receptor, beta 2 5 -160648013 NM_021911 5q34 Hs.303527 47

GABA-A receptor activity

ion channel activity

extracellular ligand-gated ion channel activity

chloride channel activity

plasma membrane

integral to plasma membrane

ion transport

gamma-aminobutyric acid signaling pathway

synaptic transmission

cell junction

neurotransmitter receptor activity

chloride ion binding

chloride channel complex

synapse

postsynaptic membrane

Neuroactive ligand-receptor interaction

218051_s_at 0.224 4.996 2.150 4.800e-02 0.318 -4.131 NT5DC2 5'-nucleotidase domain containing 2 3 -52533424, -52533424 NM_022908 3p21.1 Hs.84753 7

magnesium ion binding

hydrolase activity

 
201352_at -0.180 10.474 -2.150 4.801e-02 0.318 -4.132 YME1L1 YME1-like 1 (S. cerevisiae) 10 -27439388 NM_014263 10p14 Hs.499145 Hs.74647 9

nucleotide binding

metalloendopeptidase activity

ATP binding

mitochondrion

proteolysis

peptidase activity

zinc ion binding

membrane

nucleoside-triphosphatase activity

metal ion binding

 
223679_at 0.202 5.410 2.150 4.804e-02 0.318 -4.132 CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 3 41215945 AF130085 3p21 Hs.476018 680

negative regulation of transcription from RNA polymerase II promoter

skeletal system development

patterning of blood vessels

gastrulation with mouth forming second

endoderm formation

cell fate specification

endodermal cell fate commitment

epithelial to mesenchymal transition

chromatin binding

double-stranded DNA binding

transcription factor activity

transcription coactivator activity

signal transducer activity

membrane fraction

nucleus

transcription factor complex

cytoplasm

centrosome

cytosol

cytoskeleton

plasma membrane

fascia adherens

apoptosis

cell-matrix adhesion

synaptic transmission

ectoderm development

glial cell fate determination

heart development

protein C-terminus binding

transcription factor binding

anterior/posterior axis specification

dorsal/ventral axis specification

proximal/distal pattern formation

positive regulation of specific transcription from RNA polymerase II promoter

positive regulation of heparan sulfate proteoglycan biosynthetic process

basolateral plasma membrane

lateral plasma membrane

morphogenesis of embryonic epithelium

cell-cell adhesion

catenin complex

kinase binding

protein phosphatase binding

Z disc

lamellipodium

hemopoiesis

lung development

androgen receptor signaling pathway

positive regulation of epithelial cell differentiation

beta-catenin destruction complex

forebrain development

regulation of centriole-centriole cohesion

pancreas development

microvillus membrane

negative regulation of chondrocyte differentiation

T cell differentiation in the thymus

cellular protein localization

Axin-APC-beta-catenin-GSK3B complex

embryonic hindlimb morphogenesis

embryonic arm morphogenesis

regulation of cell proliferation

odontogenesis of dentine-containing tooth

embryonic digit morphogenesis

apical junction complex

positive regulation of MAPKKK cascade

apical part of cell

alpha-catenin binding

cadherin binding

bone resorption

positive regulation of osteoblast differentiation

negative regulation of osteoclast differentiation

cell maturation

synaptic vesicle transport

thymus development

camera-type eye morphogenesis

androgen receptor binding

synapse organization

Wnt receptor signaling pathway through beta-catenin

beta-catenin-TCF7L2 complex

I-SMAD binding

Wnt signaling pathway

Focal adhesion

Adherens junction

Tight junction

Leukocyte transendothelial migration

Melanogenesis

Pathogenic Escherichia coli infection - EHEC

Pathways in cancer

Colorectal cancer

Endometrial cancer

Prostate cancer

Thyroid cancer

Basal cell carcinoma

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

208945_s_at -0.304 8.493 -2.150 4.806e-02 0.318 -4.132 BECN1 beclin 1, autophagy related 17 -38215675 NM_003766 17q21 Hs.716464 56

protein binding

cytoplasm

Golgi apparatus

trans-Golgi network

autophagy

anti-apoptosis

cellular defense response

negative regulation of cell proliferation

response to virus

membrane

cytoplasmic membrane-bounded vesicle

positive regulation of macroautophagy

protein complex

Regulation of autophagy

201711_x_at -0.305 6.362 -2.150 4.806e-02 0.318 -4.132 RANBP2 RAN binding protein 2 2 108702368 AI681120 2q12.3 Hs.199561 Hs.715056 61

peptidyl-prolyl cis-trans isomerase activity

protein binding

intracellular

nucleus

nuclear pore

cytosol

protein folding

protein import into nucleus

zinc ion binding

Ran GTPase binding

protein transport

isomerase activity

modification-dependent protein catabolic process

metal ion binding

intracellular transport

mRNA transport

intracellular protein transmembrane transport

 
219253_at -0.350 5.031 -2.150 4.807e-02 0.318 -4.133 TMEM185B transmembrane protein 185B (pseudogene) 2 -120695323 NM_024121 2q14.2 Hs.376722 5

membrane

integral to membrane

 
205130_at 0.212 4.763 2.150 4.807e-02 0.318 -4.133 RAGE renal tumor antigen 14 -101764930 NM_014226 14q32 Hs.104119 67

nucleotide binding

cyclin-dependent protein kinase activity

protein binding

ATP binding

cytoplasm

protein amino acid phosphorylation

signal transduction

transferase activity

 
205216_s_at -0.184 4.469 -2.149 4.809e-02 0.318 -4.133 APOH apolipoprotein H (beta-2-glycoprotein I) 17 -61638608 NM_000042 17q23-qter Hs.445358 129

negative regulation of endothelial cell proliferation

glycoprotein binding

phospholipid binding

extracellular region

extracellular space

triglyceride metabolic process

blood coagulation, intrinsic pathway

heparin binding

cell surface

negative regulation of endothelial cell migration

negative regulation of angiogenesis

positive regulation of blood coagulation

negative regulation of blood coagulation

organ regeneration

plasminogen activation

negative regulation of myeloid cell apoptosis

triglyceride transport

very-low-density lipoprotein particle

high-density lipoprotein particle

negative regulation of smooth muscle cell apoptosis

chylomicron

eukaryotic cell surface binding

positive regulation of lipoprotein lipase activity

negative regulation of fibrinolysis

lipoprotein lipase activator activity

 
214133_at 0.230 5.952 2.149 4.809e-02 0.318 -4.133 MUC6 mucin 6, oligomeric mucus/gel-forming 11 -1002823 AI611214 11p15.5-p15.4 Hs.528432 26

extracellular matrix structural constituent

extracellular region

maintenance of gastrointestinal epithelium

 
227436_at -0.336 7.090 -2.149 4.809e-02 0.318 -4.133 OTUD7B OTU domain containing 7B 1 -148178855 BG291552 1q21.2 Hs.98322 11

DNA binding

ubiquitin thiolesterase activity

protein binding

nucleus

cytoplasm

peptidase activity

cysteine-type peptidase activity

zinc ion binding

protein deubiquitination

modification-dependent protein catabolic process

negative regulation of I-kappaB kinase/NF-kappaB cascade

metal ion binding

 
1562442_a_at -0.194 5.114 -2.149 4.810e-02 0.318 -4.133 SSBP1 single-stranded DNA binding protein 1 7 141084644 BC008402 7q34 Hs.490394 21

DNA binding

single-stranded DNA binding

mitochondrion

DNA replication

mitochondrial nucleoid

positive regulation of helicase activity

DNA replication

Mismatch repair

Homologous recombination

202306_at 0.296 8.317 2.149 4.811e-02 0.318 -4.133 POLR2G polymerase (RNA) II (DNA directed) polypeptide G 11 62285586 NM_002696 11q13.1 Hs.14839 86

nuclear mRNA splicing, via spliceosome

RNA binding

DNA-directed RNA polymerase activity

protein binding

nucleus

nucleoplasm

transcription

transcription initiation from RNA polymerase II promoter

RNA elongation from RNA polymerase II promoter

Purine metabolism

Pyrimidine metabolism

Metabolic pathways

RNA polymerase

Huntington's disease

221781_s_at -0.280 3.074 -2.149 4.813e-02 0.318 -4.134 DNAJC10 DnaJ (Hsp40) homolog, subfamily C, member 10 2 183289243 BG168666 2q32.1 Hs.516632 13

extracellular region

endoplasmic reticulum

endoplasmic reticulum lumen

protein folding

heat shock protein binding

cell redox homeostasis

unfolded protein binding

 
215509_s_at 0.162 3.692 2.149 4.814e-02 0.318 -4.134 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) 2 -111111882 AL137654 2q14 Hs.469649 55

nucleotide binding

condensed chromosome kinetochore

condensed nuclear chromosome, centromeric region

protein serine/threonine kinase activity

ATP binding

nucleus

spindle pole body

protein amino acid phosphorylation

cell cycle

mitosis

mitotic cell cycle spindle assembly checkpoint

cell proliferation

transferase activity

cell division

Cell cycle

240396_at 0.230 4.626 2.149 4.817e-02 0.318 -4.134 IL20RA interleukin 20 receptor, alpha 6 -137362800 AI686661 6q22.33-q23.1 Hs.445868 15

receptor activity

cytokine receptor activity

membrane

integral to membrane

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

204152_s_at 0.194 4.888 2.149 4.817e-02 0.318 -4.134 MFNG MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 22 -36195048 AI738965 22q12 Hs.517603 15

extracellular space

Golgi apparatus

pattern specification process

membrane

integral to membrane

transferase activity, transferring glycosyl groups

integral to Golgi membrane

O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity

Notch signaling pathway

208883_at -0.384 6.168 -2.148 4.820e-02 0.318 -4.135 UBR5 ubiquitin protein ligase E3 component n-recognin 5 8 -103334744 BF515424 8q22 Hs.591856 21

RNA binding

ubiquitin-protein ligase activity

protein binding

intracellular

soluble fraction

nucleus

protein modification process

ubiquitin-dependent protein catabolic process

response to DNA damage stimulus

zinc ion binding

cell proliferation

ligase activity

acid-amino acid ligase activity

metal ion binding

progesterone receptor signaling pathway

Ubiquitin mediated proteolysis

200896_x_at -0.213 9.699 -2.148 4.820e-02 0.318 -4.135 HDGF hepatoma-derived growth factor (high-mobility group protein 1-like) 1 -154978522, -154978522, -154978522 NM_004494 1q21-q23 Hs.506748 22

nucleotide binding

DNA binding

extracellular space

nucleus

cytoplasm

signal transduction

growth factor activity

heparin binding

cell proliferation

regulation of transcription

 
219766_at 0.219 5.297 2.148 4.821e-02 0.318 -4.135 B9D2 B9 protein domain 2 19 -46552161 NM_030578 19q13.2 Hs.567596 7

nucleus

cilium

microtubule basal body

cell projection organization

cilium axoneme

 
40020_at 0.204 4.436 2.148 4.821e-02 0.318 -4.135 CELSR3 cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila) 3 -48648899 AB011536 3p24.1-p21.2 Hs.631926 10

G-protein coupled receptor activity

G-protein coupled receptor activity

calcium ion binding

protein binding

plasma membrane

homophilic cell adhesion

neuropeptide signaling pathway

multicellular organismal development

integral to membrane

integral to membrane

 
44673_at 0.178 6.216 2.148 4.823e-02 0.318 -4.136 SIGLEC1 sialic acid binding Ig-like lectin 1, sialoadhesin 20 -3615616 N53555 20p13 Hs.31869 13

protein binding

sugar binding

extracellular region

plasma membrane

inflammatory response

cell-matrix adhesion

integral to membrane

cell-cell adhesion

Cell adhesion molecules (CAMs)

223053_x_at -0.212 8.527 -2.147 4.829e-02 0.319 -4.137 SSU72 SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) 1 -1466915 AF277178 1p36.33 Hs.30026 Hs.657061 7

phosphoprotein phosphatase activity

nucleus

cytoplasm

mRNA processing

hydrolase activity

 
203630_s_at -0.277 6.525 -2.147 4.830e-02 0.319 -4.137 COG5 component of oligomeric golgi complex 5 7 -106635533, -106629424 NM_006348 7q22-q31 Hs.239631 Hs.658093 Hs.97627 13

molecular_function

protein binding

cytoplasm

Golgi apparatus

cytosol

intra-Golgi vesicle-mediated transport

protein transport

membrane

Golgi transport complex

Golgi transport complex

 
212793_at -0.540 7.080 -2.147 4.834e-02 0.319 -4.137 DAAM2 dishevelled associated activator of morphogenesis 2 6 39868770 BF513244 6p21.2 Hs.357128 7

actin binding

cellular component organization

Rho GTPase binding

actin cytoskeleton organization

Wnt signaling pathway

227468_at 0.220 4.630 2.147 4.834e-02 0.319 -4.138 CPT1C carnitine palmitoyltransferase 1C 19 54886212, 54886218 AL565745 19q13.33 Hs.112195 8

carnitine O-palmitoyltransferase activity

mitochondrion

mitochondrial outer membrane

lipid metabolic process

fatty acid metabolic process

acyltransferase activity

membrane

integral to membrane

transferase activity

Fatty acid metabolism

PPAR signaling pathway

Adipocytokine signaling pathway

229466_at 0.187 5.339 2.147 4.834e-02 0.319 -4.138 TRIM66 tripartite motif-containing 66 11 -8590161 AU144187 11p15.4 Hs.130836 4

protein binding

intracellular

nucleus

zinc ion binding

chromocenter

transcription repressor activity

protein homodimerization activity

negative regulation of transcription, DNA-dependent

metal ion binding

 
204719_at 0.455 7.988 2.147 4.835e-02 0.319 -4.138 ABCA8 ATP-binding cassette, sub-family A (ABC1), member 8 17 -64375025 NM_007168 17q24 Hs.58351 9

nucleotide binding

ATP binding

plasma membrane

transport

integral to membrane

ATPase activity

ATPase activity, coupled to transmembrane movement of substances

ABC transporters

231820_x_at 0.246 4.918 2.147 4.835e-02 0.319 -4.138 ZNF587 zinc finger protein 587 19 63053080 BF038484 19q13.43 Hs.642598 Hs.715493 6

DNA binding

intracellular

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

metal ion binding

 
1570308_at 0.166 2.725 2.146 4.837e-02 0.319 -4.138 LOC100131298 PRO1095 22   AF130053 22q13.2 Hs.621363      
1553559_at 0.294 4.421 2.146 4.840e-02 0.319 -4.139 TMEM171 transmembrane protein 171 5 72452143 NM_173490 5q13.2 Hs.162246 5

membrane

integral to membrane

 
219049_at 0.257 5.376 2.146 4.841e-02 0.319 -4.139 CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 8 -19305951, -19305951, -19305951 NM_018371 8p21.3 Hs.613729 Hs.655166 10

intracellular

soluble fraction

Golgi apparatus

nervous system development

cell recognition

cell proliferation

peptidoglycan glycosyltransferase activity

anatomical structure morphogenesis

heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process

glucuronosyltransferase activity

membrane

integral to membrane

transferase activity

UDP-N-acetylgalactosamine metabolic process

integral to Golgi membrane

extracellular matrix organization

chondroitin sulfate biosynthetic process

heparin biosynthetic process

Golgi cisterna membrane

UDP-glucuronate metabolic process

metal ion binding

glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity

glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity

dermatan sulfate proteoglycan biosynthetic process

chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process

Chondroitin sulfate biosynthesis

Metabolic pathways

234633_at -0.217 3.013 -2.146 4.842e-02 0.319 -4.139 KRTAP4-11 keratin associated protein 4-11 17 -36526961, 234615 AJ406944 17q21.2 Hs.307015 Hs.719695 Hs.719855 5

keratin filament

 
231686_at -0.244 3.759 -2.146 4.842e-02 0.319 -4.139 GATM glycine amidinotransferase (L-arginine:glycine amidinotransferase) 15 -43440613 AV649811 15q21.1 Hs.75335 23

cytoplasm

mitochondrion

mitochondrial inner membrane

mitochondrial intermembrane space

creatine biosynthetic process

response to oxidative stress

response to nutrient

embryonic development

response to organic substance

glycine amidinotransferase activity

membrane

transferase activity

hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines

tissue regeneration

response to peptide hormone stimulus

response to mercury ion

Glycine, serine and threonine metabolism

Arginine and proline metabolism

Metabolic pathways

218831_s_at 0.278 7.460 2.146 4.842e-02 0.319 -4.139 FCGRT Fc fragment of IgG, receptor, transporter, alpha 19 54707347, 54708247 NM_004107 19q13.3 Hs.111903 48

receptor activity

plasma membrane

immune response

female pregnancy

integral to membrane

IgG binding

antigen processing and presentation

MHC class I protein complex

 
209678_s_at -0.278 6.378 -2.146 4.843e-02 0.319 -4.139 PRKCI protein kinase C, iota 3 171422913 L18964 3q26.3 Hs.478199 91

polarisome

nucleotide binding

protein kinase C activity

protein binding

ATP binding

phospholipid binding

nucleus

cytoplasm

endosome

cytosol

protein amino acid phosphorylation

protein targeting to membrane

cytoskeleton organization

actin filament organization

intracellular signaling cascade

zinc ion binding

membrane

membrane organization

vesicle-mediated transport

apical plasma membrane

transferase activity

diacylglycerol binding

cellular response to insulin stimulus

establishment of apical/basal cell polarity

eye photoreceptor cell development

establishment or maintenance of epithelial cell apical/basal polarity

cell-cell junction organization

positive regulation of glucose import

metal ion binding

secretion

Golgi vesicle budding

regulation of establishment of protein localization

Endocytosis

Tight junction

Insulin signaling pathway

201168_x_at 0.199 7.046 2.146 4.844e-02 0.319 -4.139 ARHGDIA Rho GDP dissociation inhibitor (GDI) alpha 17 -77418885 NM_004309 17q25.3 Hs.159161 38

Rho GDP-dissociation inhibitor activity

GTPase activator activity

cytoplasm

cytoskeleton

anti-apoptosis

cell motion

negative regulation of cell adhesion

Rho protein signal transduction

identical protein binding

Neurotrophin signaling pathway

212592_at 0.705 2.643 2.145 4.845e-02 0.319 -4.139 IGJ immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides 4 -71740121 AV733266 4q21 Hs.643431 Hs.715953 24

antigen binding

extracellular region

immune response

 
229800_at 1.650 6.111 2.145 4.847e-02 0.319 -4.140 DCLK1 doublecortin-like kinase 1 13 -35241122 AI129626 13q13 Hs.507755 Hs.717124 15

nucleotide binding

protein serine/threonine kinase activity

receptor signaling protein activity

protein binding

ATP binding

integral to plasma membrane

protein amino acid phosphorylation

intracellular signaling cascade

multicellular organismal development

central nervous system development

endosome transport

transferase activity

cell differentiation

 
235849_at 0.480 6.914 2.145 4.847e-02 0.319 -4.140 SCARA5 scavenger receptor class A, member 5 (putative) 8 -27783668 BE787752 8p21.1 Hs.591833 6

receptor activity

scavenger receptor activity

iron ion binding

protein binding

plasma membrane

integral to plasma membrane

ion transport

cellular iron ion homeostasis

endocytosis

cell surface

cellular response to heat

iron ion transmembrane transport

protein homotrimerization

ferritin receptor activity

 
212742_at -0.408 9.480 -2.145 4.847e-02 0.319 -4.140 RNF115 ring finger protein 115 1 144322392 AL530462 1q21.1 Hs.523550 8

protein binding

zinc ion binding

metal ion binding

 
35436_at -0.190 7.607 -2.145 4.849e-02 0.319 -4.140 GOLGA2 golgi autoantigen, golgin subfamily a, 2 9 -130057928 L06147 9q34.11 Hs.155827 45

protein binding

Golgi apparatus

membrane

 
219948_x_at -0.162 2.013 -2.145 4.850e-02 0.319 -4.140 UGT2A3 UDP glucuronosyltransferase 2 family, polypeptide A3 4 -69828765 NM_024743 4q13.2 Hs.122583 5

metabolic process

glucuronosyltransferase activity

membrane

integral to membrane

Pentose and glucuronate interconversions

Ascorbate and aldarate metabolism

Androgen and estrogen metabolism

Starch and sucrose metabolism

Retinol metabolism

Porphyrin and chlorophyll metabolism

Metabolism of xenobiotics by cytochrome P450

Drug metabolism - cytochrome P450

Drug metabolism - other enzymes

Metabolic pathways

210600_s_at 0.206 2.526 2.145 4.850e-02 0.319 -4.140 GRK4 G protein-coupled receptor kinase 4 4 2935140 U33054 4p16.3 Hs.32959 27

nucleotide binding

G-protein coupled receptor kinase activity

signal transducer activity

ATP binding

protein amino acid phosphorylation

signal transduction

regulation of G-protein coupled receptor protein signaling pathway

transferase activity

Chemokine signaling pathway

Endocytosis

205621_at -0.208 6.865 -2.145 4.850e-02 0.319 -4.140 ALKBH1 alkB, alkylation repair homolog 1 (E. coli) 14 -77208501 NM_006020 14q24.3 Hs.94542 6

DNA dealkylation

 
207923_x_at 0.220 5.439 2.145 4.851e-02 0.319 -4.141 PAX8 paired box 8 2 -113690044 NM_013953 2q12-q14 Hs.469728 55

transcription factor activity

thyroid-stimulating hormone receptor activity

protein binding

nucleus

nucleoplasm

multicellular organismal development

anatomical structure morphogenesis

transcription activator activity

cell differentiation

regulation of transcription

positive regulation of transcription, DNA-dependent

Pathways in cancer

Thyroid cancer

205357_s_at 0.272 6.117 2.145 4.852e-02 0.319 -4.141 AGTR1 angiotensin II receptor, type 1 3 149898347, 149930656 NM_000685 3q21-q25 Hs.477887 Hs.719071 524

regulation of cell growth

angiotensin type I receptor activity

angiotensin type I receptor activity

kidney development

renin-angiotensin regulation of aldosterone production

regulation of blood vessel size by renin-angiotensin

regulation of natriuresis

receptor activity

G-protein coupled receptor activity

angiotensin type II receptor activity

plasma membrane

integral to plasma membrane

oxygen and reactive oxygen species metabolic process

signal transduction

acetyltransferase activator activity

positive regulation of foam cell differentiation

positive regulation of cholesterol esterification

regulation of vasoconstriction

regulation of vasoconstriction

regulation of vasoconstriction

calcium-mediated signaling

bradykinin receptor binding

positive regulation of cellular protein metabolic process

positive regulation of phospholipase A2 activity

positive regulation of NAD(P)H oxidase activity

low-density lipoprotein particle remodeling

regulation of cell proliferation

regulation of vasodilation

protein heterodimerization activity

positive regulation of inflammatory response

elevation of cytosolic calcium ion concentration during G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)

Calcium signaling pathway

Neuroactive ligand-receptor interaction

Vascular smooth muscle contraction

Renin-angiotensin system

226222_at -0.256 5.512 -2.145 4.853e-02 0.319 -4.141 KIAA1432 KIAA1432 9 5619326, 5646582 AB037853 9p24.1 Hs.211520 5

membrane

integral to membrane

 
227529_s_at 0.260 3.035 2.145 4.853e-02 0.319 -4.141 AKAP12 A kinase (PRKA) anchor protein 12 6 151602826, 151688358 BF511276 6q24-q25 Hs.371240 33

nucleus

cytoplasm

cytoskeleton

plasma membrane

cell cortex

protein targeting

signal transduction

G-protein coupled receptor protein signaling pathway

protein kinase A binding

 
201251_at -0.515 8.477 -2.145 4.853e-02 0.319 -4.141 PKM2 pyruvate kinase, muscle 15 -70278423 NM_002654 15q22 Hs.534770 55

nucleotide binding

magnesium ion binding

pyruvate kinase activity

pyruvate kinase activity

protein binding

ATP binding

nucleus

cytoplasm

cytosol

cytosol

glycolysis

programmed cell death

transferase activity

potassium ion binding

Glycolysis / Gluconeogenesis

Purine metabolism

Pyruvate metabolism

Carbon fixation in photosynthetic organisms

Biosynthesis of phenylpropanoids

Biosynthesis of terpenoids and steroids

Biosynthesis of alkaloids derived from shikimate pathway

Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid

Biosynthesis of alkaloids derived from histidine and purine

Biosynthesis of alkaloids derived from terpenoid and polyketide

Biosynthesis of plant hormones

Metabolic pathways

Type II diabetes mellitus

209596_at 1.003 6.122 2.144 4.855e-02 0.319 -4.141 MXRA5 matrix-remodelling associated 5 X -3236607 AF245505 Xp22.33 Hs.369422 5

protein binding

extracellular region

 
224895_at 0.398 8.841 2.144 4.857e-02 0.319 -4.142 YAP1 Yes-associated protein 1, 65kDa 11 101486419 AA557632 11q13 Hs.503692 46

protein binding

 
218512_at 0.227 8.191 2.144 4.857e-02 0.319 -4.142 WDR12 WD repeat domain 12 2 -203453568 NM_018256 2q33.2 Hs.73291 12

maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

protein binding

nucleus

nucleoplasm

nucleolus

rRNA processing

Notch signaling pathway

cell proliferation

preribosome, large subunit precursor

ribosomal large subunit biogenesis

PeBoW complex

 
225078_at 0.229 6.685 2.144 4.858e-02 0.319 -4.142 EMP2 epithelial membrane protein 2 16 -10529780 AV686514 16p13.2 Hs.531561 17

cell proliferation

membrane

integral to membrane

 
214657_s_at -0.356 5.063 -2.144 4.858e-02 0.319 -4.142 NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding) 11 64946844, 64946844 AU134977 11q13.1 Hs.523789 Hs.648467 6    
207540_s_at 0.265 3.888 2.144 4.861e-02 0.319 -4.142 SYK spleen tyrosine kinase 9 92603832, 92604027, 92629525 NM_003177 9q22 Hs.371720 213

nucleotide binding

serotonin secretion

non-membrane spanning protein tyrosine kinase activity

receptor signaling protein tyrosine kinase activity

integrin binding

protein binding

ATP binding

cytoplasm

plasma membrane

protein complex assembly

leukocyte adhesion

enzyme linked receptor protein signaling pathway

integrin-mediated signaling pathway

intracellular signaling cascade

activation of JUN kinase activity

cell proliferation

organ morphogenesis

transferase activity

leukotriene biosynthetic process

B cell receptor complex

neutrophil chemotaxis

T cell receptor complex

positive regulation of mast cell degranulation

beta selection

interspecies interaction between organisms

positive regulation of interleukin-3 biosynthetic process

positive regulation of granulocyte macrophage colony-stimulating factor biosynthetic process

positive regulation of B cell differentiation

positive regulation of gamma-delta T cell differentiation

positive regulation of alpha-beta T cell differentiation

positive regulation of alpha-beta T cell proliferation

protein amino acid autophosphorylation

positive regulation of peptidyl-tyrosine phosphorylation

positive regulation of calcium-mediated signaling

B cell receptor signaling pathway

Natural killer cell mediated cytotoxicity

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

221504_s_at -0.319 7.538 -2.144 4.863e-02 0.319 -4.143 ATP6V1H ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H 8 -54790667, -54790667 AF112204 8q11.2 Hs.491737 20

vacuolar proton-transporting V-type ATPase, V1 domain

protein binding

cytosol

plasma membrane

ion transport

endocytosis

vacuolar acidification

ATP synthesis coupled proton transport

ATP hydrolysis coupled proton transport

proton transport

hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances

ATPase activity

enzyme regulator activity

interspecies interaction between organisms

proton-transporting ATPase activity, rotational mechanism

regulation of defense response to virus by virus

Oxidative phosphorylation

Metabolic pathways

Lysosome

Vibrio cholerae infection

Epithelial cell signaling in Helicobacter pylori infection

209686_at 0.387 3.632 2.143 4.864e-02 0.319 -4.143 S100B S100 calcium binding protein B 21 -46842958 BC001766 21q22.3 Hs.422181 131

ruffle

calcium ion binding

nucleus

cytoplasm

cytoplasm

axonogenesis

central nervous system development

learning or memory

zinc ion binding

cell proliferation

protein homodimerization activity

protein homodimerization activity

S100 beta binding

tau protein binding

calcium-dependent protein binding

 
224621_at -0.211 8.366 -2.143 4.868e-02 0.319 -4.144 MAPK1 mitogen-activated protein kinase 1 22 -20453318, -20443946 AA129773 22q11.2 22q11.21 Hs.431850 822

MAPKKK cascade

nucleotide binding

phosphotyrosine binding

protein serine/threonine kinase activity

protein serine/threonine kinase activity

protein binding

ATP binding

nucleus

nucleoplasm

nucleolus

cytoplasm

cytosol

cytosol

cytoskeleton

protein amino acid phosphorylation

induction of apoptosis

chemotaxis

response to DNA damage stimulus

cell cycle

Ras protein signal transduction

synaptic transmission

organ morphogenesis

transferase activity

MAP kinase 2 activity

cytosine metabolic process

lipopolysaccharide-mediated signaling pathway

response to lipopolysaccharide

response to exogenous dsRNA

interspecies interaction between organisms

negative regulation of cell differentiation

T cell receptor signaling pathway

B cell receptor signaling pathway

MAPK signaling pathway

ErbB signaling pathway

Chemokine signaling pathway

mTOR signaling pathway

Vascular smooth muscle contraction

Dorso-ventral axis formation

TGF-beta signaling pathway

Axon guidance

VEGF signaling pathway

Focal adhesion

Adherens junction

Gap junction

Toll-like receptor signaling pathway

Natural killer cell mediated cytotoxicity

T cell receptor signaling pathway

B cell receptor signaling pathway

Fc epsilon RI signaling pathway

Fc gamma R-mediated phagocytosis

Long-term potentiation

Neurotrophin signaling pathway

Long-term depression

Regulation of actin cytoskeleton

Insulin signaling pathway

GnRH signaling pathway

Melanogenesis

Type II diabetes mellitus

Alzheimer's disease

Prion diseases

Pathways in cancer

Colorectal cancer

Renal cell carcinoma

Pancreatic cancer

Endometrial cancer

Glioma

Prostate cancer

Thyroid cancer

Melanoma

Bladder cancer

Chronic myeloid leukemia

Acute myeloid leukemia

Non-small cell lung cancer

238416_x_at 0.256 4.202 2.143 4.869e-02 0.319 -4.144 ZC3H18 zinc finger CCCH-type containing 18 16 87164289 BF968618 16q24.2 Hs.93670 8

nucleic acid binding

nucleus

zinc ion binding

metal ion binding

 
230597_at 0.242 5.263 2.143 4.869e-02 0.319 -4.144 SLC7A3 solute carrier family 7 (cationic amino acid transporter, y+ system), member 3 X -70062154 AI963203 Xq13.1 Hs.175220 11

plasma membrane

transport

amino acid transport

amino acid transmembrane transporter activity

arginine transmembrane transporter activity

L-lysine transmembrane transporter activity

cationic amino acid transmembrane transporter activity

arginine transport

lysine transport

integral to membrane

 
1560274_at -0.225 2.481 -2.143 4.870e-02 0.319 -4.144 WTAP Wilms tumor 1 associated protein 6 160068141, 160068141, 160068609 BF679507 6q25-q27 Hs.446091 Hs.710715 16

nucleus

nucleolus

mRNA processing

cell cycle

RNA splicing

nuclear membrane

 
232845_at 0.257 5.948 2.143 4.870e-02 0.319 -4.144 CDH23 cadherin-like 23 10 72826709, 72826709 AL122081 10q21-q22 Hs.656032 37

calcium ion binding

protein binding

plasma membrane

cell adhesion

homophilic cell adhesion

sensory perception of sound

integral to membrane

calcium-dependent cell-cell adhesion

stereocilium

photoreceptor cell maintenance

response to stimulus

equilibrioception

 
216971_s_at -0.264 5.295 -2.143 4.871e-02 0.319 -4.144 PLEC1 plectin 1, intermediate filament binding protein 500kDa 8 -145061308, -145061308, -145061308, -145061308, -145061308, -145061308, -145061308, -145061308 Z54367 8q24 Hs.434248 58

actin binding

cytoplasm

cytoskeleton

plasma membrane

structural constituent of muscle

 
211024_s_at 0.205 3.334 2.143 4.872e-02 0.319 -4.144 NKX2-1 NK2 homeobox 1 14 -36055352, -36055352 BC006221 14q13 Hs.94367 87

negative regulation of transcription from RNA polymerase II promoter

neuron migration

specific RNA polymerase II transcription factor activity

RNA polymerase II transcription factor activity, enhancer binding

protein binding

nucleus

nucleoplasm

transcription factor complex

pattern specification process

axon guidance

brain development

endoderm development

organ morphogenesis

promoter binding

transcription activator activity

transcription activator activity

cerebral cortex cell migration

forebrain dorsal/ventral pattern formation

forebrain neuron fate commitment

cerebral cortex GABAergic interneuron differentiation

lung development

thyroid gland development

positive regulation of transcription from RNA polymerase II promoter

anatomical structure formation involved in morphogenesis

 
222490_at -0.352 6.927 -2.142 4.872e-02 0.319 -4.144 POLR3E polymerase (RNA) III (DNA directed) polypeptide E (80kD) 16 22216241 AK023160 16p12.2 Hs.460298 9

DNA-directed RNA polymerase activity

nucleus

transcription

 
219763_at -0.218 3.475 -2.142 4.873e-02 0.319 -4.144 DENND1A DENN/MADD domain containing 1A 9 -125203690, -125181753 NM_024820 9q33.3 Hs.568340 8

protein binding

plasma membrane

SH3 domain binding

cell junction

dendrite

clathrin coated vesicle membrane

cytoplasmic vesicle

cell soma

synapse

synaptic vesicle endocytosis

 
213901_x_at -0.351 7.998 -2.142 4.873e-02 0.319 -4.145 RBM9 RNA binding motif protein 9 22 -34464728, -34464728 AW149379 22q13.1 Hs.282998 18

nucleotide binding

transcription corepressor activity

RNA binding

nucleus

cytoplasm

mRNA processing

transcription factor binding

RNA splicing

RNA metabolic process

negative regulation of transcription

estrogen receptor signaling pathway

regulation of cell proliferation

 
227788_at -0.331 8.148 -2.142 4.873e-02 0.319 -4.145 USP13 ubiquitin specific peptidase 13 (isopeptidase T-3) 3 180853626 AW295324 3q26.2-q26.3 Hs.175322 11

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

ubiquitin-specific protease activity

ubiquitin-dependent protein catabolic process

peptidase activity

zinc ion binding

metal ion binding

 
229970_at -0.396 4.674 -2.142 4.874e-02 0.319 -4.145 KBTBD7 kelch repeat and BTB (POZ) domain containing 7 13 -40663710 BE672291 13q14.11 Hs.63841 9

molecular_function

protein binding

cellular_component

biological_process

 
235878_at 0.224 3.801 2.142 4.874e-02 0.319 -4.145 TAF1B TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa 2 9901021 AA780048 2p25 Hs.584833 15

transcription factor activity

nucleus

nucleoplasm

transcription, DNA-dependent

regulation of transcription

 
1556960_a_at 0.215 4.074 2.142 4.874e-02 0.319 -4.145 hCG_2007354 hCG2007354 12   AK057223 12q24.33 Hs.703008 2    
232025_at 0.200 5.863 2.142 4.875e-02 0.319 -4.145 SYT7 synaptotagmin VII 11 -61039360 AF038535 11q12-q13.1 Hs.502730 Hs.684589 10

plasma membrane repair

transporter activity

calcium ion binding

lysosome

transport

synaptic vesicle

membrane

integral to membrane

cell junction

cytoplasmic vesicle

synapse

 
224240_s_at 0.172 4.561 2.142 4.878e-02 0.319 -4.145 CCL28 chemokine (C-C motif) ligand 28 5 -43417356 AF266504 5p12 Hs.656904 16

extracellular region

extracellular space

chemotaxis

immune response

elevation of cytosolic calcium ion concentration

chemokine activity

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

205580_s_at 0.214 3.849 2.142 4.880e-02 0.319 -4.146 HRH1 histamine receptor H1 3 11153778, 11171213, 11242668, 11269384 D28481 3p25 Hs.1570 57

receptor activity

G-protein coupled receptor activity

histamine receptor activity

plasma membrane

integral to plasma membrane

inflammatory response

signal transduction

activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger

synaptic transmission

positive regulation of nitric oxide biosynthetic process

Calcium signaling pathway

Neuroactive ligand-receptor interaction

234796_at -0.186 3.822 -2.142 4.880e-02 0.319 -4.146 CABP7 calcium binding protein 7 22 28446343 AC004882 22q12.2 Hs.643608 5

calcium ion binding

 
226422_at -0.253 8.090 -2.142 4.880e-02 0.319 -4.146 ERGIC2 ERGIC and golgi 2 12 -29384845 AI760464 12p11.22 Hs.339453 11

nucleus

cytoplasm

endoplasmic reticulum

Golgi apparatus

membrane

integral to membrane

vesicle-mediated transport

 
202687_s_at 0.575 7.051 2.141 4.882e-02 0.319 -4.146 TNFSF10 tumor necrosis factor (ligand) superfamily, member 10 3 -173706157 U57059 3q26 Hs.478275 343

cytokine activity

tumor necrosis factor receptor binding

extracellular region

extracellular space

soluble fraction

integral to plasma membrane

induction of apoptosis

immune response

signal transduction

cell-cell signaling

zinc ion binding

activation of pro-apoptotic gene products

membrane

positive regulation of I-kappaB kinase/NF-kappaB cascade

metal ion binding

Cytokine-cytokine receptor interaction

Apoptosis

Natural killer cell mediated cytotoxicity

213778_x_at -0.167 6.100 -2.141 4.882e-02 0.319 -4.146 ZNF276 zinc finger protein 276 16 88314893, 88315452 AI983201 16q24.3 Hs.290154 8

DNA binding

intracellular

nucleus

zinc ion binding

regulation of transcription

metal ion binding

 
225085_at -0.263 6.216 -2.141 4.883e-02 0.319 -4.146 USP40 ubiquitin specific peptidase 40 2 -234048903 AA522888 2q37.1 Hs.96513 10

ubiquitin thiolesterase activity

ubiquitin-dependent protein catabolic process

peptidase activity

cysteine-type peptidase activity

 
221101_at 0.166 3.520 2.141 4.885e-02 0.320 -4.147 C14orf113 chromosome 14 open reading frame 113 14   NM_017630 14q32.13 Hs.675410 1    
215952_s_at -0.165 11.767 -2.141 4.886e-02 0.320 -4.147 OAZ1 ornithine decarboxylase antizyme 1 19 2220519 AF090094 19p13.3 Hs.446427 25

protein binding

polyamine biosynthetic process

ornithine decarboxylase inhibitor activity

 
212275_s_at 0.191 6.557 2.141 4.887e-02 0.320 -4.147 SRCAP Snf2-related CREBBP activator protein 16 30617962 NM_006662 16p11.2 Hs.647334 16

nucleotide binding

DNA binding

transcription coactivator activity

helicase activity

histone acetyltransferase activity

ATP binding

nucleus

regulation of transcription from RNA polymerase II promoter

chromatin modification

hydrolase activity

protein complex

interspecies interaction between organisms

regulation of transcription

 
228429_x_at 0.197 6.701 2.141 4.888e-02 0.320 -4.147 KIF9 kinesin family member 9 3 -47244520 BG168764 3p21.31 Hs.373947 4

nucleotide binding

microtubule motor activity

ATP binding

microtubule

microtubule-based movement

 
210127_at 0.226 4.139 2.141 4.890e-02 0.320 -4.148 RAB6B RAB6B, member RAS oncogene family 3 -135025769 BC002510 3q22.1 Hs.707804 10

nucleotide binding

GTPase activity

GTP binding

Golgi apparatus

retrograde vesicle-mediated transport, Golgi to ER

small GTPase mediated signal transduction

protein transport

membrane

vesicle-mediated transport

 
1554507_at -0.174 1.951 -2.141 4.890e-02 0.320 -4.148 NAALAD2 N-acetylated alpha-linked acidic dipeptidase 2 11 89507465 BC027594 11q14.3-q21 Hs.503560 6

carboxypeptidase activity

proteolysis

peptidase activity

serine-type peptidase activity

metallopeptidase activity

dipeptidyl-peptidase activity

zinc ion binding

membrane

integral to membrane

dipeptidase activity

metal ion binding

 
240027_at -0.352 2.622 -2.140 4.892e-02 0.320 -4.148 LIN7A lin-7 homolog A (C. elegans) 12 -79715301 BF062244 12q21 Hs.144333 17

protein binding

plasma membrane

tight junction

protein complex assembly

exocytosis

neurotransmitter secretion

protein transport

basolateral plasma membrane

synaptosome

cell junction

synapse

postsynaptic membrane

synaptic vesicle transport

 
208668_x_at 0.248 10.511 2.140 4.894e-02 0.320 -4.148 HMGN2 high-mobility group nucleosomal binding domain 2 1 26671488 BC003689 1p36.1 Hs.181163 23

chromatin

DNA binding

protein binding

nucleus

cytoplasm

chromatin organization

regulation of transcription, DNA-dependent

 
1554915_a_at -0.362 3.308 -2.140 4.894e-02 0.320 -4.148 PDE12 phosphodiesterase 12 3 57517020 BC034978 3p14.3 Hs.572993 3

hydrolase activity

 
210314_x_at 0.256 4.173 2.140 4.895e-02 0.320 -4.148 TNFSF13 tumor necrosis factor (ligand) superfamily, member 13 17 7402332 AF114013 17p13.1 Hs.54673 66

cytokine activity

tumor necrosis factor receptor binding

extracellular region

extracellular space

immune response

signal transduction

positive regulation of cell proliferation

membrane

positive regulation of isotype switching to IgA isotypes

Cytokine-cytokine receptor interaction

213435_at -0.281 5.922 -2.139 4.901e-02 0.320 -4.149 SATB2 SATB homeobox 2 2 -199842468 AB028957 2q33 Hs.516617 9

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

sequence-specific DNA binding

 
242201_at 0.408 5.241 2.139 4.902e-02 0.320 -4.150 PMS2L5 postmeiotic segregation increased 2-like 5 7 73944829, 73944829 AI418253 7q11-q22 Hs.292996 Hs.647025 4

ATP binding

mismatch repair

mismatched DNA binding

 
215880_at -0.181 4.811 -2.139 4.903e-02 0.320 -4.150 NAGLU N-acetylglucosaminidase, alpha- 17 37941476 AI364950 17q21 Hs.50727 21

alpha-N-acetylglucosaminidase activity

lysosome

nervous system development

metabolic process

hydrolase activity, acting on glycosyl bonds

glycosaminoglycan metabolic process

Glycosaminoglycan degradation

Metabolic pathways

Lysosome

1570383_at 0.174 3.704 2.139 4.905e-02 0.320 -4.150 BMP1 bone morphogenetic protein 1 8 22078619, 22078619 AF289591 8p21.3 Hs.1274 38

cartilage condensation

ossification

metalloendopeptidase activity

cytokine activity

calcium ion binding

extracellular space

proteolysis

multicellular organismal development

growth factor activity

peptidase activity

zinc ion binding

cell differentiation

 
244315_at -0.171 2.021 -2.139 4.906e-02 0.320 -4.150 PLSCR1 phospholipid scramblase 1 3 -147715656 BE066040 3q23 Hs.130759 34

calcium ion binding

protein binding

plasma membrane

response to virus

integral to membrane

phospholipid scrambling

SH3 domain binding

phospholipid scramblase activity

platelet activation

 
215867_x_at -0.250 5.200 -2.139 4.907e-02 0.320 -4.151 CA12 carbonic anhydrase XII 15 -61402782 AL050025 15q22 Hs.210995 27

carbonate dehydratase activity

cytoplasm

plasma membrane

one-carbon metabolic process

zinc ion binding

integral to membrane

lyase activity

metal ion binding

Nitrogen metabolism

217789_at -0.250 6.482 -2.139 4.908e-02 0.320 -4.151 SNX6 sorting nexin 6 14 -34100368, -34100368 NM_021249 14q13.1 Hs.583855 7

protein binding

intracellular

cytoplasm

intracellular protein transport

cell communication

negative regulation of epidermal growth factor receptor activity

negative regulation of transcription

negative regulation of transforming growth factor beta receptor signaling pathway

phosphoinositide binding

protein homodimerization activity

 
231667_at 0.272 5.016 2.138 4.911e-02 0.320 -4.151 SLC39A5 solute carrier family 39 (metal ion transporter), member 5 12 54910086, 54910767 AW614558 12q13.3 Hs.591018 7

plasma membrane

ion transport

zinc ion transport

zinc ion binding

integral to membrane

basolateral plasma membrane

metal ion transport

metal ion transmembrane transporter activity

 
202260_s_at 0.226 5.791 2.138 4.912e-02 0.320 -4.151 STXBP1 syntaxin binding protein 1 9 129414306 NM_003165 9q34.1 Hs.288229 38

protein binding

cytoplasm

mitochondrion

vesicle docking during exocytosis

axon target recognition

protein transport

membrane

synaptic vesicle maturation

vesicle-mediated transport

negative regulation of synaptic transmission, GABAergic

 
47550_at 0.206 4.324 2.138 4.913e-02 0.320 -4.152 LZTS1 leucine zipper, putative tumor suppressor 1 8 -20147956 N21184 8p22 Hs.521432 11

transcription factor activity

protein binding

nucleus

cytoplasm

Golgi apparatus

plasma membrane

transcription

regulation of transcription, DNA-dependent

cell cycle

postsynaptic density

cell junction

cell projection

dendritic spine

synapse

postsynaptic membrane

 
212556_at -0.431 7.542 -2.138 4.914e-02 0.321 -4.152 SCRIB scribbled homolog (Drosophila) 8 -144945077 AI469403 8q24.3 Hs.436329 37

protein binding

cytoplasm

membrane

 
215300_s_at 0.186 2.597 2.138 4.915e-02 0.321 -4.152 FMO5 flavin containing monooxygenase 5 1 -145124461, -145122508 AK022172 1q21.1 Hs.642706 Hs.719397 18

monooxygenase activity

flavin-containing monooxygenase activity

endoplasmic reticulum

microsome

biological_process

membrane

integral to membrane

intrinsic to endoplasmic reticulum membrane

FAD binding

NADP or NADPH binding

oxidation reduction

Drug metabolism - cytochrome P450

221023_s_at 0.144 6.310 2.138 4.917e-02 0.321 -4.152 KCNH6 potassium voltage-gated channel, subfamily H (eag-related), member 6 17 58954426, 58954426 NM_030779 17q23.3 Hs.591177 6

voltage-gated ion channel activity

voltage-gated potassium channel activity

regulation of transcription, DNA-dependent

ion transport

potassium ion transport

signal transduction

membrane

integral to membrane

potassium ion binding

 
235995_at 0.218 4.396 2.138 4.917e-02 0.321 -4.152 PUM2 pumilio homolog 2 (Drosophila) 2 -20311933 BF514625 2p22-p21 Hs.467824 18

RNA binding

protein binding

cytoplasm

regulation of translation

 
226188_at -0.559 9.540 -2.138 4.918e-02 0.321 -4.153 HSPC159 galectin-related protein 2 64534830 AK025603 2p14 Hs.372208 9

sugar binding

intracellular

 
201198_s_at -0.290 8.426 -2.138 4.918e-02 0.321 -4.153 PSMD1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 2 231629852 AI860431 2q37.1 Hs.3887 43

proteasome complex

protein binding

cytosol

proteasome regulatory particle

enzyme regulator activity

anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process

regulation of protein catabolic process

negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle

positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle

Proteasome

232523_at -0.635 6.578 -2.137 4.919e-02 0.321 -4.153 MEGF10 multiple EGF-like-domains 10 5 126654354 AU144892 5q33 Hs.438709 9

protein binding

plasma membrane

phagocytosis

cell adhesion

integral to membrane

 
209121_x_at 0.234 7.887 2.137 4.920e-02 0.321 -4.153 NR2F2 nuclear receptor subfamily 2, group F, member 2 15 94670160, 94675114, 94676797, 94677572 M64497 15q26 Hs.657455 27

transcription factor activity

ligand-regulated transcription factor activity

steroid hormone receptor activity

transcription corepressor activity

nucleus

regulation of transcription from RNA polymerase II promoter

lipid metabolic process

signal transduction

zinc ion binding

sequence-specific DNA binding

metal ion binding

 
222489_s_at -0.272 7.460 -2.137 4.922e-02 0.321 -4.153 WRNIP1 Werner helicase interacting protein 1 6 2710664 AA621580 6p25.2 Hs.236828 14

nucleotide binding

DNA synthesis during DNA repair

DNA binding

protein binding

protein binding

ATP binding

nucleus

response to DNA damage stimulus

hydrolase activity

ATPase activity

regulation of DNA replication initiation

 
216388_s_at 0.255 5.046 2.137 4.922e-02 0.321 -4.153 LTB4R leukotriene B4 receptor 14 23850544, 23852152 U33448 14q11.2-q12 Hs.567248 43

nucleotide binding

leukotriene B4 receptor activity

receptor activity

plasma membrane

integral to plasma membrane

cell motion

muscle contraction

inflammatory response

immune response

signal transduction

activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger

Neuroactive ligand-receptor interaction

225748_at -0.242 7.010 -2.137 4.923e-02 0.321 -4.153 LTV1 LTV1 homolog (S. cerevisiae) 6 144206200 AI458051 6q24.2 Hs.185675 2    
222876_s_at 0.186 5.383 2.137 4.924e-02 0.321 -4.154 ADAP2 ArfGAP with dual PH domains 2 17 26272879 AI761520 17q11.2 Hs.514063 13

phosphatidylinositol-4,5-bisphosphate binding

phosphatidylinositol-3,4,5-trisphosphate binding

cytoplasm

mitochondrial envelope

plasma membrane

heart development

ARF GTPase activator activity

zinc ion binding

protein binding, bridging

regulation of ARF GTPase activity

phosphatidylinositol-3,4-bisphosphate binding

inositol 1,3,4,5 tetrakisphosphate binding

metal ion binding

 
210804_x_at -0.250 4.161 -2.137 4.924e-02 0.321 -4.154 SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 2 -40192789, -40192789 AF128524 2p23-p22 Hs.31961 Hs.468274 Hs.656261 39

calcium:sodium antiporter activity

calcium ion binding

calmodulin binding

plasma membrane

integral to plasma membrane

ion transport

sodium ion transport

muscle contraction

cell communication

sodium ion transmembrane transporter activity

calcium ion transmembrane transporter activity

antiporter activity

sodium ion binding

cytosolic calcium ion transport

Calcium signaling pathway

Cardiac muscle contraction

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

235745_at 0.246 5.693 2.137 4.926e-02 0.321 -4.154 ERN1 endoplasmic reticulum to nucleus signaling 1 17 -59474121 AV704183 17q24.2 Hs.133982 Hs.700027 27

nucleotide binding

magnesium ion binding

protein serine/threonine kinase activity

protein binding

ATP binding

endoplasmic reticulum

endoplasmic reticulum membrane

mRNA processing

protein modification process

apoptosis

induction of apoptosis

response to unfolded protein

activation of signaling protein activity involved in unfolded protein response

cell cycle arrest

membrane

integral to membrane

transferase activity

hydrolase activity

endoribonuclease activity, producing 5'-phosphomonoesters

integral to endoplasmic reticulum membrane

regulation of transcription

protein amino acid autophosphorylation

Alzheimer's disease

224162_s_at -0.412 7.935 -2.137 4.927e-02 0.321 -4.154 FBXO31 F-box protein 31 16 -85920444, -85920444 BC002985 16q24.2 Hs.567582 10

cell cycle

cyclin catabolic process

SCF ubiquitin ligase complex

modification-dependent protein catabolic process

cyclin binding

SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

G1 DNA damage checkpoint

cellular response to DNA damage stimulus

 
234939_s_at -0.261 3.097 -2.136 4.929e-02 0.321 -4.154 PHF12 PHD finger protein 12 17 -24263287, -24256396 AL161953 17q11.2 Hs.714975 9

protein binding

nucleus

nucleolus

zinc ion binding

transcription repressor activity

transcriptional repressor complex

regulation of transcription

negative regulation of transcription, DNA-dependent

metal ion binding

 
1552777_a_at 0.187 4.606 2.136 4.933e-02 0.321 -4.155 RAET1E retinoic acid early transcript 1E 6 -150251293 NM_139165 6q25.1 Hs.511818 11

protein binding

plasma membrane

immune response

integral to membrane

antigen processing and presentation

MHC class I protein complex

Natural killer cell mediated cytotoxicity

212351_at -0.218 7.433 -2.136 4.937e-02 0.321 -4.156 EIF2B5 eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa 3 185335503 U23028 3q27.1 Hs.283551 39

ovarian follicle development

translation initiation factor activity

translation initiation factor activity

guanyl-nucleotide exchange factor activity

guanyl-nucleotide exchange factor activity

guanyl-nucleotide exchange factor activity

nucleus

cytoplasm

eukaryotic translation initiation factor 2B complex

response to heat

response to heat

response to heat

response to glucose stimulus

astrocyte development

oligodendrocyte development

transferase activity

translation initiation factor binding

negative regulation of translational initiation in response to stress

myelination

response to peptide hormone stimulus

positive regulation of translational initiation

cellular response to stimulus

 
224403_at -0.287 3.725 -2.135 4.939e-02 0.321 -4.156 FCRL4 Fc receptor-like 4 1 -155810163 AF343661 1q21 Hs.120260 15

receptor activity

plasma membrane

immune response

integral to membrane

 
203278_s_at -0.303 6.444 -2.135 4.939e-02 0.321 -4.156 PHF21A PHD finger protein 21A 11 -45907445 NM_016621 11p11.2 Hs.502458 11

histone deacetylase complex

negative regulation of transcription from RNA polymerase II promoter

DNA binding

protein binding

nucleus

zinc ion binding

chromatin modification

regulation of transcription

metal ion binding

 
233083_at -0.182 4.034 -2.135 4.945e-02 0.322 -4.157 MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like 4 75242692 AV706915 4q13.3 Hs.479954 2

histidine biosynthetic process

magnesium ion binding

methenyltetrahydrofolate cyclohydrolase activity

methylenetetrahydrofolate dehydrogenase (NAD+) activity

binding

purine nucleotide biosynthetic process

one-carbon metabolic process

cellular amino acid biosynthetic process

methionine biosynthetic process

folic acid and derivative biosynthetic process

oxidoreductase activity

hydrolase activity

oxidation reduction

 
227038_at -0.455 5.370 -2.134 4.948e-02 0.322 -4.158 SGMS2 sphingomyelin synthase 2 4 108965169, 109033868 AI963083 4q25 Hs.595423 13

Golgi apparatus

plasma membrane

integral to plasma membrane

lipid metabolic process

sphingolipid metabolic process

sphingomyelin biosynthetic process

kinase activity

transferase activity

integral to Golgi membrane

sphingomyelin synthase activity

ceramide cholinephosphotransferase activity

Sphingolipid metabolism

Metabolic pathways

233408_at 0.269 4.006 2.134 4.952e-02 0.322 -4.159 PREX2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 8 69027156, 69027156 AW236486 8q13.2 Hs.591867 6

guanyl-nucleotide exchange factor activity

protein binding

intracellular

G-protein coupled receptor protein signaling pathway

intracellular signaling cascade

Rac GTPase activator activity

Rac guanyl-nucleotide exchange factor activity

regulation of Rho protein signal transduction

 
219110_at 0.193 6.871 2.134 4.952e-02 0.322 -4.159 GAR1 GAR1 ribonucleoprotein homolog (yeast) 4 110956114 NM_018983 4q25 Hs.69851 15

cation channel activity

nucleus

nucleolus

small nucleolar ribonucleoprotein complex

rRNA processing

Cajal body

rRNA binding

 
215482_s_at -0.263 7.900 -2.134 4.952e-02 0.322 -4.159 EIF2B4 eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa 2 -27440722, -27440722 AJ011307 2p23.3 Hs.169474 29

ovarian follicle development

translation initiation factor activity

guanyl-nucleotide exchange factor activity

guanyl-nucleotide exchange factor activity

cytoplasm

eukaryotic translation initiation factor 2B complex

translational initiation

regulation of translation

response to heat

response to heat

response to glucose stimulus

oligodendrocyte development

translation initiation factor binding

negative regulation of translational initiation in response to stress

myelination

response to peptide hormone stimulus

cellular metabolic process

cellular response to stimulus

 
203399_x_at 0.192 3.589 2.134 4.952e-02 0.322 -4.159 PSG3 pregnancy specific beta-1-glycoprotein 3 19 -47917633 NM_021016 19q13.2 Hs.654413 13

extracellular region

defense response

female pregnancy

 
212764_at -0.236 9.713 -2.134 4.953e-02 0.322 -4.159 ZEB1 zinc finger E-box binding homeobox 1 10 31647429, 31647717, 31647752, 31648106, 31650069 AI806174 10p11.2 Hs.124503 52

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

transcription coactivator activity

transcription corepressor activity

intracellular

nucleus

immune response

zinc ion binding

cell proliferation

sequence-specific DNA binding

metal ion binding

 
236314_at 0.253 5.271 2.134 4.953e-02 0.322 -4.159 EPM2AIP1 EPM2A (laforin) interacting protein 1 3 -37002361 AW162758 3p22.1 Hs.28020 8

endoplasmic reticulum

 
37943_at -0.298 6.013 -2.134 4.954e-02 0.322 -4.159 ZFYVE26 zinc finger, FYVE domain containing 26 14 -67282989 AB002319 14q24.1 Hs.98041 6

cell death

zinc ion binding

metal ion binding

 
242176_at -0.215 5.443 -2.134 4.954e-02 0.322 -4.159 MEF2A myocyte enhancer factor 2A 15 97923655, 97990705 AA491228 15q26 Hs.268675 77

transcription factor activity

nucleus

regulation of transcription, DNA-dependent

apoptosis

multicellular organismal development

nervous system development

muscle organ development

cell differentiation

sequence-specific DNA binding

 
226359_at 0.207 4.197 2.133 4.956e-02 0.322 -4.159 GTPBP1 GTP binding protein 1 22 37431752 BF514508 22q13.1 Hs.276925 11

nucleotide binding

GTPase activity

GTP binding

immune response

signal transduction

 
224715_at 0.197 5.901 2.133 4.957e-02 0.322 -4.159 WDR34 WD repeat domain 34 9 -130435760 BG338983 9q34.11 Hs.495240 3    
222304_x_at -0.630 7.880 -2.133 4.957e-02 0.322 -4.159 OR7E47P olfactory receptor, family 7, subfamily E, member 47 pseudogene 12   AW514038 12q13.13 Hs.524431 2    
231975_s_at -0.366 5.472 -2.133 4.957e-02 0.322 -4.159 MIER3 mesoderm induction early response 1, family member 3 5 -56251185 AK002183 5q11.2 Hs.657594 7

DNA binding

nucleus

regulation of transcription

 
208401_s_at 0.223 4.699 2.133 4.958e-02 0.322 -4.160 GLP1R glucagon-like peptide 1 receptor 6 39124534 U01157 6p21 Hs.389103 31

glucagon receptor activity

plasma membrane

response to stress

G-protein coupled receptor protein signaling pathway

activation of adenylate cyclase activity

elevation of cytosolic calcium ion concentration

learning or memory

regulation of heart contraction

peptide receptor activity, G-protein coupled

integral to membrane

cAMP-mediated signaling

insulin secretion

hormone secretion

Neuroactive ligand-receptor interaction

223620_at 0.547 3.877 2.133 4.959e-02 0.322 -4.160 GPR34 G protein-coupled receptor 34 X 41433169 AF039686 Xp11.4-p11.3 Hs.495989 10

receptor activity

G-protein coupled receptor activity

plasma membrane

integral to plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

purinergic nucleotide receptor activity, G-protein coupled

 
227930_at -0.334 7.574 -2.133 4.960e-02 0.322 -4.160 EIF2C4 eukaryotic translation initiation factor 2C, 4 1 36046414 AI669957 1p34.3 Hs.471492 8

cytoplasmic mRNA processing body

RNA binding

protein binding

cytoplasm

mRNA catabolic process

regulation of translation

gene silencing by RNA

gene silencing by miRNA, negative regulation of translation

 
204516_at -0.301 6.943 -2.133 4.960e-02 0.322 -4.160 ATXN7 ataxin 7 3 63825272 BG390306 3p21.1-p12 Hs.476595 37

protein binding

intracellular

nucleus

nucleolus

cytoplasm

nucleus organization

visual perception

cell death

zinc ion binding

nuclear matrix

histone deubiquitination

regulation of transcription

 
222042_x_at 0.151 5.617 2.133 4.965e-02 0.322 -4.161 MEX3D mex-3 homolog D (C. elegans) 19 -1505667 BF056534 19p13.3 Hs.436495 4

RNA binding

protein binding

nucleus

cytoplasm

zinc ion binding

metal ion binding

 
207079_s_at -0.366 7.534 -2.133 4.965e-02 0.322 -4.161 MED6 mediator complex subunit 6 14 -70120709 NM_005466 14q24.2 Hs.497353 22

RNA polymerase II transcription factor activity

transcription coactivator activity

nucleus

RNA polymerase II transcription mediator activity

regulation of transcription

positive regulation of transcription from RNA polymerase II promoter

 
202310_s_at 0.897 5.535 2.133 4.966e-02 0.322 -4.161 COL1A1 collagen, type I, alpha 1 17 -45616455 K01228 17q21.33 Hs.172928 Hs.681002 360

ossification

blood vessel development

extracellular matrix structural constituent

extracellular region

extracellular region

collagen

collagen type I

plasma membrane

response to nutrient

visual perception

sensory perception of sound

response to mechanical stimulus

response to inorganic substance

collagen fibril organization

response to corticosteroid stimulus

collagen biosynthetic process

tooth mineralization

response to hydrogen peroxide

identical protein binding

response to peptide hormone stimulus

skin morphogenesis

platelet-derived growth factor binding

embryonic skeletal system development

response to cAMP

Focal adhesion

ECM-receptor interaction

244131_at 0.168 5.149 2.132 4.967e-02 0.322 -4.161 HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 7 -26196080 AA904506 7p15 Hs.487774 54

nucleotide binding

nuclear mRNA splicing, via spliceosome

nuclear mRNA splicing, via spliceosome

RNA binding

protein binding

nucleus

nucleoplasm

spliceosomal complex

nucleolus

cytoplasm

RNA splicing

heterogeneous nuclear ribonucleoprotein complex

single-stranded telomeric DNA binding

RNA transport

 
215623_x_at -0.228 3.684 -2.132 4.967e-02 0.322 -4.161 SMC4 structural maintenance of chromosomes 4 3 161600123, 161601040 AK002200 3q26.1 Hs.58992 14

nucleotide binding

condensin complex

condensin complex

protein binding

ATP binding

nucleus

chromosome

cytoplasm

cell cycle

mitotic chromosome condensation

protein heterodimerization activity

cell division

 
207213_s_at -0.452 7.347 -2.132 4.968e-02 0.322 -4.161 USP2 ubiquitin specific peptidase 2 11 -118731134, -118731134 NM_004205 11q23.3 Hs.524085 15

cysteine-type endopeptidase activity

ubiquitin thiolesterase activity

protein binding

cytoplasm

plasma membrane

ubiquitin-dependent protein catabolic process

peptidase activity

 
206150_at 0.197 6.116 2.132 4.969e-02 0.322 -4.161 CD27 CD27 molecule 12 6424311 NM_001242 12p13 Hs.355307 53

transmembrane receptor activity

protein binding

protein binding

extracellular region

integral to plasma membrane

apoptosis

anti-apoptosis

anti-apoptosis

induction of apoptosis

immune response

cell surface receptor linked signal transduction

release of cytoplasmic sequestered NF-kappaB

membrane

immunoglobulin mediated immune response

caspase inhibitor activity

positive regulation of B cell differentiation

positive regulation of JNK cascade

Cytokine-cytokine receptor interaction

214181_x_at 0.322 4.941 2.132 4.970e-02 0.322 -4.162 LST1 leukocyte specific transcript 1 6 31661949, 31662603, 3000093, 3000747, 2801557, 2802211 AI735692 6p21.3 Hs.436066 20

cell morphogenesis

molecular_function

protein binding

cytoplasm

Golgi apparatus

immune response

regulation of cell shape

anatomical structure morphogenesis

membrane

integral to membrane

dendrite development

negative regulation of lymphocyte proliferation

 
1560147_at 0.191 2.911 2.132 4.970e-02 0.322 -4.162 LOC100131176 similar to hCG1991662 7   AK095986 7q36.1 Hs.659231      
205281_s_at -0.304 4.437 -2.132 4.974e-02 0.322 -4.162 PIGA phosphatidylinositol glycan anchor biosynthesis, class A X -15247498 NM_002641 Xp22.1 Hs.137154 27

glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex

protein binding

endoplasmic reticulum

endoplasmic reticulum membrane

biosynthetic process

positive regulation of metabolic process

membrane

integral to membrane

preassembly of GPI anchor in ER membrane

transferase activity, transferring glycosyl groups

phosphatidylinositol N-acetylglucosaminyltransferase activity

Glycosylphosphatidylinositol(GPI)-anchor biosynthesis

Metabolic pathways

207124_s_at 0.181 4.594 2.132 4.974e-02 0.322 -4.162 GNB5 guanine nucleotide binding protein (G protein), beta 5 15 -50200414, -50200414 NM_006578 15q21.2 Hs.155090 26

GTPase activity

signal transducer activity

protein binding

nucleus

heterotrimeric G-protein complex

plasma membrane

signal transduction

G-protein coupled receptor protein signaling pathway

Chemokine signaling pathway

229956_at -0.238 3.017 -2.131 4.975e-02 0.322 -4.163 NR2C1 nuclear receptor subfamily 2, group C, member 1 12 -93948315, -93938188 AI659426 12q22 Hs.108301 Hs.707524 17

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

steroid hormone receptor activity

protein binding

nucleus

regulation of transcription, DNA-dependent

zinc ion binding

transcription repressor activity

protein homodimerization activity

histone deacetylase binding

sequence-specific DNA binding

metal ion binding

 
201886_at 0.167 7.279 2.131 4.977e-02 0.322 -4.163 DCAF11 DDB1 and CUL4 associated factor 11 14 23653745, 23653825, 23654331, 23654333 NM_025230 14q11.2 Hs.525251 9

protein binding

 
1553785_at -0.191 4.126 -2.131 4.977e-02 0.322 -4.163 RASGEF1B RasGEF domain family, member 1B 4 -82567242 NM_152545 4q21.21 Hs.591696 4

guanyl-nucleotide exchange factor activity

intracellular

regulation of small GTPase mediated signal transduction

 
218022_at -0.191 7.084 -2.131 4.977e-02 0.322 -4.163 VRK3 vaccinia related kinase 3 19 -55171535 NM_016440 19q13 Hs.443330 7

nucleotide binding

protein serine/threonine kinase activity

protein binding

ATP binding

protein amino acid phosphorylation

transferase activity

 
200005_at -0.291 8.377 -2.131 4.977e-02 0.322 -4.163 EIF3D eukaryotic translation initiation factor 3, subunit D 22 -35236842 NM_003753 22q13.1 Hs.55682 20

translation initiation factor activity

translation initiation factor activity

protein binding

cytoplasm

cytosol

eukaryotic translation initiation factor 3 complex

translational initiation

translational initiation

 
242282_at -0.152 6.080 -2.131 4.978e-02 0.322 -4.163 ZFPM1 zinc finger protein, multitype 1 16 87047514 AI889717 16q24.2 Hs.632218 12

DNA binding

protein binding

intracellular

nucleus

heart development

zinc ion binding

regulation of transcription

metal ion binding

 
205003_at 0.216 7.291 2.131 4.979e-02 0.322 -4.163 DOCK4 dedicator of cytokinesis 4 7 -111153399 NM_014705 7q31.1 Hs.654652 16

guanyl-nucleotide exchange factor activity

protein binding

membrane

SH3 domain binding

PDZ domain binding

Rac GTPase activator activity

stereocilium

Rac GTPase binding

 
214336_s_at 0.195 4.822 2.131 4.979e-02 0.322 -4.163 COPA coatomer protein complex, subunit alpha 1 -158525000 AI621079 1q23-q25 Hs.162121 Hs.685025 30

hormone activity

structural molecule activity

calcium ion binding

extracellular region

extracellular space

soluble fraction

cytoplasm

endoplasmic reticulum

microsome

Golgi apparatus

cytosol

protein folding

intracellular protein transport

retrograde vesicle-mediated transport, Golgi to ER

membrane

membrane organization

vesicle-mediated transport

membrane coat

COPI vesicle coat

pancreatic juice secretion

cytoplasmic vesicle

COPI coating of Golgi vesicle

unfolded protein binding

 
224641_at -0.348 9.844 -2.131 4.980e-02 0.322 -4.163 FYTTD1 forty-two-three domain containing 1 3 198960820, 198961020, 198961657 BF576005 3q29 Hs.277533 6    
203598_s_at -0.385 7.006 -2.131 4.981e-02 0.322 -4.164 WBP4 WW domain binding protein 4 (formin binding protein 21) 13 40533696 AK000979 13q14.11 Hs.411300 9

nucleic acid binding

protein binding

nucleus

spliceosomal complex

mRNA processing

zinc ion binding

RNA splicing

nuclear speck

metal ion binding

 
210342_s_at 0.230 4.705 2.131 4.982e-02 0.322 -4.164 TPO thyroid peroxidase 2 1396239, 1397186 M17755 2p25 Hs.467554 84

iodide peroxidase activity

calcium ion binding

integral to plasma membrane

response to oxidative stress

membrane

oxidoreductase activity

heme binding

hormone biosynthetic process

hydrogen peroxide catabolic process

oxidation reduction

Tyrosine metabolism

Metabolic pathways

Cytokine-cytokine receptor interaction

Jak-STAT signaling pathway

Hematopoietic cell lineage

Autoimmune thyroid disease

213157_s_at 0.233 5.644 2.131 4.983e-02 0.322 -4.164 WSCD1 WSC domain containing 1 17 5914657 BF115148 17p13.2 Hs.370166 2

membrane

integral to membrane

 
205968_at -0.615 8.432 -2.131 4.983e-02 0.322 -4.164 KCNS3 potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3 2 17923425 NM_002252 2p24 Hs.414489 12

voltage-gated ion channel activity

delayed rectifier potassium channel activity

protein binding

cytoplasm

Golgi apparatus

plasma membrane

ion transport

potassium ion transport

voltage-gated potassium channel complex

potassium channel regulator activity

integral to membrane

potassium ion binding

 
209201_x_at 0.284 4.486 2.131 4.984e-02 0.322 -4.164 CXCR4 chemokine (C-X-C motif) receptor 4 2 -136588388, -136588388 L01639 2q21 Hs.593413 604

activation of MAPK activity

response to hypoxia

actin binding

G-protein coupled receptor activity

protein binding

cytoplasm

plasma membrane

integral to plasma membrane

apoptosis

chemotaxis

inflammatory response

immune response

signal transduction

G-protein coupled receptor protein signaling pathway

elevation of cytosolic calcium ion concentration

response to virus

coreceptor activity

C-C chemokine receptor activity

C-X-C chemokine receptor activity

initiation of viral infection

cell leading edge

myosin light chain binding

interspecies interaction between organisms

Cytokine-cytokine receptor interaction

Chemokine signaling pathway

Endocytosis

Axon guidance

Leukocyte transendothelial migration

218001_at 0.237 7.483 2.130 4.985e-02 0.322 -4.164 MRPS2 mitochondrial ribosomal protein S2 9 137532303 NM_016034 9q34 Hs.382044 7

structural constituent of ribosome

intracellular

mitochondrion

ribosome

translation

small ribosomal subunit

 
204625_s_at 0.207 4.774 2.130 4.986e-02 0.322 -4.164 ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) 17 42686206 BF115658 17q21.32 Hs.218040 581

receptor activity

integrin binding

plasma membrane

cell-substrate junction assembly

cell adhesion

cell-matrix adhesion

integrin-mediated signaling pathway

blood coagulation

integrin complex

external side of plasma membrane

negative regulation of foam cell differentiation

negative regulation of lipid storage

regulation of cell migration

platelet alpha granule membrane

negative regulation of lipid transport

identical protein binding

interspecies interaction between organisms

negative regulation of low-density lipoprotein receptor biosynthetic process

negative regulation of lipoprotein metabolic process

Focal adhesion

ECM-receptor interaction

Hematopoietic cell lineage

Regulation of actin cytoskeleton

Hypertrophic cardiomyopathy (HCM)

Arrhythmogenic right ventricular cardiomyopathy (ARVC)

204967_at -0.264 3.828 -2.130 4.986e-02 0.322 -4.164 SHROOM2 shroom family member 2 X 9714495 NM_001649 Xp22.3 Hs.567236 7

cell morphogenesis

lens morphogenesis in camera-type eye

cytoplasm

cytoskeleton

microtubule

plasma membrane

cell-cell adherens junction

tight junction

cell cortex

multicellular organismal development

brain development

beta-catenin binding

eye pigment granule organization

amiloride-sensitive sodium channel activity

apical plasma membrane

cell migration

protein domain specific binding

negative regulation of actin filament depolymerization

cortical actin cytoskeleton

filamentous actin

establishment of melanosome localization

melanosome organization

cell soma

cellular pigment accumulation

ear development

apical protein localization

cell-cell junction maintenance

actin filament binding

actin filament bundle formation

 
202172_at -0.377 8.806 -2.130 4.987e-02 0.322 -4.165 VEZF1 vascular endothelial zinc finger 1 17 -53403908 BG035116 17q22 Hs.463569 3

angiogenesis

endothelial cell development

DNA binding

specific RNA polymerase II transcription factor activity

intracellular

nucleus

regulation of transcription from RNA polymerase II promoter

cellular defense response

zinc ion binding

regulation of transcription

metal ion binding

 
211319_at 0.188 3.565 2.130 4.987e-02 0.322 -4.165 RAE1 RAE1 RNA export 1 homolog (S. pombe) 20 55359551, 55360024 U85943 20q13.31 Hs.371698 22

RNA binding

nucleus

nuclear outer membrane

nuclear pore

cytoplasm

cytoskeleton

mRNA export from nucleus

microtubule binding

 
213571_s_at -0.305 7.408 -2.130 4.988e-02 0.322 -4.165 EIF4E2 eukaryotic translation initiation factor 4E family member 2 2 233123600 BF516289 2q37.1 Hs.292026 Hs.700929 15

RNA cap binding

translation initiation factor activity

protein binding

cytoplasm

translational initiation

regulation of translation

mTOR signaling pathway

Insulin signaling pathway

1552809_at -0.245 3.148 -2.130 4.990e-02 0.322 -4.165 RFX4 regulatory factor X, 4 (influences HLA class II expression) 12 105501162, 105519079, 105602615 NM_002920 12q24 Hs.388827 13

DNA binding

nucleus

regulation of transcription, DNA-dependent

 
203324_s_at 0.399 7.516 2.130 4.990e-02 0.322 -4.165 CAV2 caveolin 2 7 115926679 NM_001233 7q31.1 Hs.212332 Hs.603096 50

negative regulation of endothelial cell proliferation

protein binding

intracellular

Golgi apparatus

plasma membrane

integral to plasma membrane

caveola

vesicle fusion

mitochondrion organization

endoplasmic reticulum organization

transport vesicle

protein homodimerization activity

vesicle docking

perinuclear region of cytoplasm

skeletal muscle fiber development

protein oligomerization

Focal adhesion

201729_s_at -0.190 7.560 -2.130 4.992e-02 0.322 -4.165 KIAA0100 KIAA0100 17 -23965584 NM_014680 17q11.2 Hs.151761 5

extracellular region

tricarboxylic acid cycle

malate dehydrogenase (acceptor) activity

 
220443_s_at 0.234 4.966 2.130 4.993e-02 0.322 -4.166 VAX2 ventral anterior homeobox 2 2 70981227 NM_012476 2p13 Hs.249170 5

negative regulation of transcription from RNA polymerase II promoter

transcription factor activity

nucleus

cytoplasm

regulation of transcription, DNA-dependent

multicellular organismal development

ectoderm development

axonogenesis

visual perception

dorsal/ventral axis specification

chromatin DNA binding

sequence-specific DNA binding

embryonic eye morphogenesis

retina development in camera-type eye

 
218949_s_at -0.560 7.515 -2.129 4.995e-02 0.322 -4.166 QRSL1 glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 6 107184133 NM_018292 6q21 Hs.406917 7

nucleotide binding

ATP binding

translation

ligase activity

carbon-nitrogen ligase activity, with glutamine as amido-N-donor

 
223260_s_at -0.348 5.083 -2.129 4.995e-02 0.322 -4.166 POLK polymerase (DNA directed) kappa 5 74843412 AB027564 5q13 Hs.715657 39

magnesium ion binding

damaged DNA binding

DNA-directed DNA polymerase activity

nucleus

DNA replication

DNA repair

response to DNA damage stimulus

zinc ion binding

transferase activity

nucleotidyltransferase activity

 
216969_s_at 0.189 5.691 2.129 4.996e-02 0.322 -4.166 KIF22 kinesin family member 22 16 89374 AC002301 16p11.2 Hs.613351 25

nucleotide binding

kinetochore

DNA binding

microtubule motor activity

protein binding

ATP binding

nucleus

microtubule

DNA repair

microtubule-based movement

mitosis

 
217839_at -0.295 8.919 -2.129 4.997e-02 0.322 -4.166 TFG TRK-fused gene 3 101910849 NM_006070 3q12.2 Hs.518123 25

signal transducer activity

cytoplasm

identical protein binding

positive regulation of I-kappaB kinase/NF-kappaB cascade

Pathways in cancer

Thyroid cancer

212292_at 0.199 5.988 2.129 4.997e-02 0.322 -4.167 SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 13 -28981551 AW452623 13q12-q14 Hs.14846 23

receptor activity

integral to plasma membrane

transport

amino acid transport

amino acid transmembrane transporter activity

arginine transmembrane transporter activity

arginine transport

membrane

 
213349_at -0.284 7.070 -2.129 4.998e-02 0.322 -4.167 TMCC1 transmembrane and coiled-coil domain family 1 3 -130849324, -130849324 AI934469 3q22.1 Hs.477547 Hs.709936 6

membrane

integral to membrane

 
238857_at 0.261 4.257 2.129 4.999e-02 0.322 -4.167 ATE1 arginyltransferase 1 10 -123492614 BE675478 10q26.13 Hs.632080 6

arginyltransferase activity

nucleus

cytoplasm

acyltransferase activity

protein arginylation

transferase activity

modification-dependent protein catabolic process

 
213485_s_at -0.283 6.322 -2.129 4.999e-02 0.322 -4.167 ABCC10 ATP-binding cassette, sub-family C (CFTR/MRP), member 10 6 43507466 AK000002 6p21.1 Hs.55879 12

nucleotide binding

ATP binding

plasma membrane

transport

integral to membrane

ATPase activity

ATPase activity, coupled to transmembrane movement of substances

ABC transporters

6921 Genes