Table 2  Post-Translational Modifications

Associated with Homology Domains

 

RESID:AA0008  glycine radical

Feature:

Active site: Gly (stable glycyl radical)

Homology domains:  (not exclusive)

Domain: glycyl radical homology

 

RESID:AA0026  L-erythro-beta-hydroxyasparagine

Feature:

Modified site: erythro-beta-hydroxyasparagine (Asn)

RESID:AA0027  L-erythro-beta-hydroxyaspartic acid

Feature:

Modified site: erythro-beta-hydroxyaspartic acid (Asp)

Homology domains:

Domain: EGF homology

 

RESID:AA0032  L-gamma-carboxyglutamic acid

Feature:

Modified site: gamma-carboxyglutamic acid (Glu)

Homology domains: (not exclusive)

Domain: Gla domain homology

 

RESID:AA0073  3'-methyl-L-histidine

Feature:

Modified site: 3'-methylhistidine (His)

Homology domains: (not exclusive)

Domain: myosin motor domain homology

 

RESID:AA0144  3'-(8alpha-FAD)-L-histidine

Feature:

Modified site: 3'-FAD-histidine (His)

Homology domains: (probably not exclusive)

Domain: fumarate reductase flavoprotein homology

 

RESID:AA0150  O-phosphopantetheine-L-serine

Feature:

Binding site: phosphopantetheine (Ser) (covalent)

Homology domains: (exclusive)

Domain: acyl carrier protein homology

 

RESID:AA0117  N6-biotinyl-L-lysine

Feature:

Binding site: biotin (Lys) (covalent)

 

RESID:AA0118  N6-lipoyl-L-lysine

Feature:

Binding site: lipoamide (Lys) (covalent)

Homology domains: (not exclusive, may not be homogeneous)

Domain: lipoyl/biotin-binding homology

 

RESID:AA0119  N6-pyridoxal phosphate-L-lysine

Feature:

Binding site: pyridoxal phosphate (Lys) (covalent)

Homology domains:

Domain: glycine C-acetyltransferase homology

Domain: [acyl-carrier-protein] S-malonyltransferase homology

Domain: animal histidine decarboxylase homology

Domain: tryptophan synthase beta chain homology

 

RESID:AA0133  S-phytochromobilin-L-cysteine

Feature:

Binding site: phytochromobilin (Cys) (covalent)

Homology domains: (exclusive)

Domain: phytochrome homology

 

RESID:AA0141  L-cysteinyl homocitryl molybdenum-heptairon-nonasulfide

Feature:

Binding site: homocitryl Mo-7Fe-8S cluster (Cys) (covalent)

Homology domains: (exclusive)

Domain: nitrogenase vanadium-iron protein alpha chain homology

 

RESID:AA0142  L-cysteinyl molybdopterin

Feature:

Binding site: molybdopterin (Cys) (covalent)

Homology domains: (not exclusive)

Domain: molybdopterin-binding domain homology

 

RESID:AA0234  S-methyl-L-cysteine

Feature:

Binding site: methyl (Cys) (covalent)

Homology domains: (probably not exclusive)

Domain: methylated-DNA--protein-cysteine S-methyltransferase homology

 

RESID:AA0134  heme-bis-L-cysteine

RESID:AA0135  heme-L-cysteine

Feature:

Binding site: heme (Cys) (covalent)

Homology domains:

Domain: cytochrome b6 homology

Domain: cytochrome c homology

Domain: cytochrome c1 heme protein homology

Domain: cytochrome c3 homology

Domain: cytochrome c6 homology

Domain: nirT homology

Domain: Pseudomonas cytochrome-c peroxidase homology

Domain: T. aquaticus cytochrome c552 homology

 

RESID:AA0136  tetrakis-L-cysteinyl iron

Feature:

Binding site: iron (Cys)

Homology domains:

Domain: desulforedoxin homology

Domain: rubredoxin homology

 

RESID: AA0137  tetrakis-L-cysteinyl diiron disulfide

Feature:

Binding site: 2Fe-2S cluster (Cys) (covalent)

Homology domains:  (not exclusive)

Domain: ferredoxin [2Fe-2S] homology

 

RESID: AA0225  bis-L-cysteinyl bis-L-histidino diiron disulfide

Feature:

Binding site: 2Fe-2S cluster (Cys, His, Cys, His) (covalent)

Homology domains:  (exclusive)

Domain: Rieske [2Fe-2S] homology

 

RESID:AA0139  tris-L-cysteinyl triiron tetrasulfide

Feature:

Binding site: 3Fe-4S cluster (Cys) (covalent)

 

RESID:AA0140  tetrakis-L-cysteinyl tetrairon tetrasulfide

Feature:

Binding site: 4Fe-4S cluster (Cys) (covalent)

Homology domains: (not exclusive)

Domain: ferredoxin 2[4Fe-4S] homology